BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 008925
         (548 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
           [Vitis vinifera]
 gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  834 bits (2155), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/558 (71%), Positives = 467/558 (83%), Gaps = 11/558 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MNIL+ KGKP EA  IFN L EEGHRPTLITYTTL+AALTRQKRFKSI SLISK+EK+G+
Sbjct: 78  MNILIEKGKPQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEKNGL 137

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPDS+ FNAMINA SESGNV EAMKIF+KMKD GCKPTTST+NTLIKGYGN G PEE LK
Sbjct: 138 KPDSVFFNAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLK 197

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL LMSQ++NVKPNDRT+N L+RAWC+K  I EAWNVVYKM ASG+QPD VTYNTLARAY
Sbjct: 198 LLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLARAY 257

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           AQ GET RAE M+ EMQNN+V PNERTCGII++GYCKEG M+DA+RFLYRM+   VHPNL
Sbjct: 258 AQNGETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRFLYRMRNYGVHPNL 317

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V+FNSLIKGFLDI D+DGVD+ALTLMEEFGVKPDVVTFSTIM+AWSS GLM KCQEIFDD
Sbjct: 318 VIFNSLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMNAWSSVGLMDKCQEIFDD 377

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MVKAGIEPDIH FSILAKGYVRAGEP+KAES+LT+M K GV PNVV+FTT+ISGWC+A K
Sbjct: 378 MVKAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFTTIISGWCSAGK 437

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ A  +YEKMCE+GI PNLKT+ETL+WGYGEAK+P +AEELLQ+ME+KGV P KSTIQL
Sbjct: 438 MEYASRVYEKMCEMGICPNLKTFETLIWGYGEAKEPQKAEELLQIMEQKGVAPVKSTIQL 497

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSM-PNKKDEIAVESIHR---KQNLSASNSTFLQI 476
           VAD+W A+GLA EAKR+    EE  + M   K+D++A ES+ R   KQNL AS S  +Q+
Sbjct: 498 VADAWHALGLANEAKRIKNDVEEAPKVMISTKEDDVAAESLERIYQKQNLKASYSDIVQV 557

Query: 477 PGVVSSEHNGSSAAKIRSQIVLRS-----DTVWTATKSLFV-NTYGSGVQPMVVCRKQC- 529
           PG+V ++ NGS+AA IRS+++++      + +WTATKS+F+    G  V+P  +CR Q  
Sbjct: 558 PGIVMTDQNGSTAANIRSRMIMKGPGSPPENLWTATKSMFLAQASGFRVRPSFICRTQFQ 617

Query: 530 SQVGTCGQFVNAYRLVFI 547
            QVG CGQ VN+ RLVF+
Sbjct: 618 GQVGVCGQCVNSCRLVFL 635



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 160/311 (51%), Gaps = 5/311 (1%)

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           + V+   +  NIL+     K   +EA  +   +   G +P  +TY TL  A  +      
Sbjct: 69  RTVRSRTKLMNILIE----KGKPQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKS 124

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
              ++ +++ N ++P+      +++ + + GN+++AM+   +MK+    P    FN+LIK
Sbjct: 125 IPSLISKLEKNGLKPDSVFFNAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIK 184

Query: 249 GFLDIKDSDGVDKALTLM-EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           G+ +    +   K L LM +E  VKP+  TF++++ AW +   + +   +   M  +G++
Sbjct: 185 GYGNAGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQ 244

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+  ++ LA+ Y + GE  +AE ++  M+   V PN      +I+G+C   KM+ A+  
Sbjct: 245 PDVVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRF 304

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
             +M   G++PNL  + +L+ G+ +       +E L +MEE GV+P   T   + ++W +
Sbjct: 305 LYRMRNYGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMNAWSS 364

Query: 428 IGLAREAKRVL 438
           +GL  + + + 
Sbjct: 365 VGLMDKCQEIF 375


>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 608

 Score =  793 bits (2047), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/554 (70%), Positives = 457/554 (82%), Gaps = 16/554 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MNIL+GKGKPHEA+ IF+ L+E+GHRPTLITYTTLVAALT+ K F+SI  LISKVE++GM
Sbjct: 65  MNILIGKGKPHEANLIFDNLVEDGHRPTLITYTTLVAALTKLKHFESIFLLISKVEENGM 124

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPDSIL+NAMINA SESGNV EAMKIFQKMKD+GCKPTTST+NTLIKGYGN GKPEE LK
Sbjct: 125 KPDSILYNAMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLK 184

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L LMS D +VKPNDRTYNILVRAWCSK +IEEAWNV++KMVASGIQPD VTYN LARAY
Sbjct: 185 MLHLMSLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAY 244

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           AQ GET RAE ++ EMQ  +V PNERTCGIIV+GYCKEGNM +A+RF+YRMKEL VHPNL
Sbjct: 245 AQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNL 304

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V+FNSLIKGFLDI D+DGVD+ALTLMEE+GVKPDV+TFSTIM+AWSSAGLM KCQEIF+D
Sbjct: 305 VIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFND 364

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M KAGIEPDIH FSILAKGYVRAGE + AES+LTSM K GV PNVV+ TT+ISGWC+A K
Sbjct: 365 MAKAGIEPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGWCSAGK 424

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ A  +YEKMCEIGI+PNLKT+ETL+WGY EA+QP +AEELLQ+MEEKGV P+KSTIQL
Sbjct: 425 MENAKMVYEKMCEIGISPNLKTFETLIWGYAEARQPGKAEELLQLMEEKGVFPEKSTIQL 484

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPN-KKDEIAVES---IHRKQNLSASNSTFLQI 476
           VAD+WR IGL  EAKR+ K  EED +   + K+ EI VES   I+R QN SAS    LQI
Sbjct: 485 VADAWRNIGLLCEAKRITKIEEEDEELYADCKRGEIPVESLERIYRDQNGSASYLKTLQI 544

Query: 477 PGVVSSEHNGS-SAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQPMVVCRKQCSQ-VGT 534
            G V ++ NGS SA  IRSQ+VLR           + ++  +  QP+++CR+ C   V  
Sbjct: 545 SGEVMTKQNGSTSAVNIRSQLVLRR----------YRSSCQNRKQPLIICRQHCRHCVRM 594

Query: 535 CGQFVNAYRLVFIN 548
           CG+ +N+  ++ I+
Sbjct: 595 CGKLINSCGMIAIS 608



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 158/311 (50%), Gaps = 5/311 (1%)

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           + V    +  NIL+     K    EA  +   +V  G +P  +TY TL  A  +      
Sbjct: 56  RTVHSRTKLMNILI----GKGKPHEANLIFDNLVEDGHRPTLITYTTLVAALTKLKHFES 111

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
              ++ +++ N ++P+      +++ + + GN+++AM+   +MK+    P    FN+LIK
Sbjct: 112 IFLLISKVEENGMKPDSILYNAMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIK 171

Query: 249 GFLDIKDSDGVDKALTLMEEFG-VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           G+ +    +   K L LM   G VKP+  T++ ++ AW S   + +   +   MV +GI+
Sbjct: 172 GYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQ 231

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+  ++ILA+ Y + GE  +AE ++  M+   V PN      +++G+C    M  A+  
Sbjct: 232 PDVVTYNILARAYAQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRF 291

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
             +M E+G++PNL  + +L+ G+ +       +E L +MEE GV+P   T   + ++W +
Sbjct: 292 VYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWSS 351

Query: 428 IGLAREAKRVL 438
            GL  + + + 
Sbjct: 352 AGLMDKCQEIF 362


>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Glycine max]
          Length = 583

 Score =  773 bits (1997), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/554 (68%), Positives = 454/554 (81%), Gaps = 8/554 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L+GKGKPHEA  +FN L EEGH+PTLITYTTLVAALTRQKRFKSI +L+SKV  +GM
Sbjct: 29  MNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGM 88

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPDSIL NAMINA SESG VDEAMKIFQKMK+ GCKPTTSTYNTLIKG+G  G+P ES+K
Sbjct: 89  KPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMK 148

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL++M QD+NVKPNDRTYNIL++AWC+K  +EEAWNV++KMVASGIQPD VTYNT+ARAY
Sbjct: 149 LLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAY 208

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           AQ GET RAE+++ +M  N V+PNERTCGII+SGYCKEGNM +A+RFLYRMKEL V PN 
Sbjct: 209 AQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNP 268

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           VVFNSLIKG+LD  D++GVD+ALTLMEEFG+KPDVVTFSTIM+AWSSAGLM  C+EIF+D
Sbjct: 269 VVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFND 328

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MVKAGIEPDIH +SILAKGYVRAG+P+KAE++LTSM KYGV PNVV+FTT+ISGWC A K
Sbjct: 329 MVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGK 388

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M RA  + EKM E+G +PNLKTYETL+WGYGEAKQPW+AEELL  MEE+GV P+ ST+QL
Sbjct: 389 MDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQL 448

Query: 421 VADSWRAIGLAREAKRVLKSAEE----DRQSMPNKKDEIAVESIHRKQNLSASNSTFLQI 476
           VAD+WRAIGL +EA R+L  +EE    D++   +K    ++ESI++KQ LSAS S  LQI
Sbjct: 449 VADAWRAIGLFKEANRILNGSEEESELDQEFDSDKIQVQSLESIYKKQKLSASPSNLLQI 508

Query: 477 PGVVSSEHNGSSAAKIRSQIVLR-SDTVWTATKSL-FVNTYGS-GVQPMVVCRKQCSQVG 533
           P VV +    ++   IR ++V++ SD +   T S+ FV T  S GVQP++V R+Q  Q  
Sbjct: 509 PDVVVTHPTRTTNGNIRCRMVVKLSDNMRNVTTSMFFVRTRSSYGVQPLIVSRQQI-QNQ 567

Query: 534 TCGQFVNAYRLVFI 547
               F++  R+V I
Sbjct: 568 VVRPFLDCCRVVSI 581



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 147/299 (49%), Gaps = 1/299 (0%)

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+     K    EA  V   +   G +P  +TY TL  A  +         +L ++ +N 
Sbjct: 28  LMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNG 87

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           ++P+      +++ + + G +++AM+   +MKE    P    +N+LIKGF          
Sbjct: 88  MKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESM 147

Query: 261 KALTLM-EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
           K L +M ++  VKP+  T++ ++ AW +   + +   +   MV +GI+PD+  ++ +A+ 
Sbjct: 148 KLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARA 207

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y + GE ++AE ++  M    V PN      +ISG+C    M  A+    +M E+G++PN
Sbjct: 208 YAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPN 267

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
              + +L+ GY +       +E L +MEE G++P   T   + ++W + GL    + + 
Sbjct: 268 PVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIF 326



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 36/165 (21%)

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV------------------ 351
           +H  + L    +  G+P +A+++  ++ + G  P ++ +TT+                  
Sbjct: 22  VHARTKLMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLS 81

Query: 352 -----------------ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
                            I+ +  + K+  AM I++KM E G  P   TY TL+ G+G A 
Sbjct: 82  KVADNGMKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAG 141

Query: 395 QPWRAEELLQVM-EEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           +P+ + +LL++M +++ V+P   T  ++  +W       EA  VL
Sbjct: 142 RPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVL 186


>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Glycine max]
          Length = 621

 Score =  773 bits (1996), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/554 (67%), Positives = 457/554 (82%), Gaps = 8/554 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L+GKGKPHEA  +F+ L EEGH+PTLITYTTLVAALTRQKRFKSI +L+SKV  +GM
Sbjct: 67  MNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGM 126

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPDSIL NAMINA S+SG VDEAMKIFQKMK+ GCKPTTSTYNTLIKG+G VG+P ES+K
Sbjct: 127 KPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMK 186

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL++M QD+NVKPNDRTYNIL++AWC+K  +EEAWNV++KMVASGIQPD VTYNT+ARAY
Sbjct: 187 LLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAY 246

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           AQ GET +AE+++ +MQ N+V+PNERTCGII+SGYCKEGNM +A+RFLYRMKEL VHPN 
Sbjct: 247 AQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNP 306

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           VVFNSLIKG+LD  D++GVD+ALTLMEEFG+KPDVVTFSTIM+AWSSAGLM  C+EIF+D
Sbjct: 307 VVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFND 366

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MVKAGIEPDIH +SILAKGYVRAG+P+KAES+LTSM KYGV  NVV+FTT+ISGWC A K
Sbjct: 367 MVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGK 426

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M RA S+ EKM E+G +PNLKTYETL+WGYGEAKQPW+AEE+L  MEE+GV P+ ST+QL
Sbjct: 427 MDRAFSLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQL 486

Query: 421 VADSWRAIGLAREAKRVLKSAEE----DRQSMPNKKDEIAVESIHRKQNLSASNSTFLQI 476
           VAD+WRAIGL +EA R+L  +EE    D++   +K    ++ESI++KQ LSAS S  LQI
Sbjct: 487 VADAWRAIGLFKEANRILNGSEEESELDQEFDSDKMPVQSLESIYKKQKLSASPSNLLQI 546

Query: 477 PGVVSSEHNGSSAAKIRSQIVLR-SDTVWTATKSL-FVNTYGS-GVQPMVVCRKQCSQVG 533
             VV +    ++   IRS++V++ SD +   T S+ FV T  S GVQP++V  +Q  Q  
Sbjct: 547 RDVVVAHPERTTNGNIRSRMVVKLSDNMRNVTTSMFFVRTRSSYGVQPLIVSSQQI-QNQ 605

Query: 534 TCGQFVNAYRLVFI 547
               F++  R+V I
Sbjct: 606 VVRPFLDCCRVVSI 619



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 151/299 (50%), Gaps = 1/299 (0%)

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+ A   K    EA  V + +   G +P  +TY TL  A  +         +L ++ +N 
Sbjct: 66  LMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNG 125

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           ++P+      +++ +   G +++AM+   +MKE    P    +N+LIKGF  +       
Sbjct: 126 MKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESM 185

Query: 261 KALTLM-EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
           K L +M ++  VKP+  T++ ++ AW +   + +   +   MV +GI+PD+  ++ +A+ 
Sbjct: 186 KLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARA 245

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y + GE +KAE ++  M+   V PN      +ISG+C    M  A+    +M E+G++PN
Sbjct: 246 YAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPN 305

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
              + +L+ GY +A      +E L +MEE G++P   T   + ++W + GL    + + 
Sbjct: 306 PVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIF 364



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 36/165 (21%)

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV------------------ 351
           +H  + L    +  G+P +A+++  ++ + G  P ++ +TT+                  
Sbjct: 60  VHARTKLMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLS 119

Query: 352 -----------------ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
                            I+ + ++ K+  AM I++KM E G  P   TY TL+ G+G   
Sbjct: 120 KVADNGMKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVG 179

Query: 395 QPWRAEELLQVM-EEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           +P+ + +LL++M +++ V+P   T  ++  +W       EA  VL
Sbjct: 180 RPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVL 224


>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
 gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
          Length = 453

 Score =  723 bits (1866), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/435 (78%), Positives = 391/435 (89%), Gaps = 1/435 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN+L+GKGKP EAH IFN L++EGH+PTLITYTTLVAALTRQK FKSIL LISKVE++GM
Sbjct: 20  MNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENGM 79

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPDSILFN++INA SESGN+ EAMK+F+KMK+SGCKPTTST+NTLIKGYGN GK EE+LK
Sbjct: 80  KPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALK 139

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ + QD  VKPN RTYNILVRAWC+K ++EEAWN+VYKMVASG+QPDAVTYNTLARAY
Sbjct: 140 LLEFL-QDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAY 198

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+ GET RAE+M+ EM N +V PNERTC IIV+GYCKEGNM DA RF++RMKEL V PNL
Sbjct: 199 AEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNL 258

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            VFNSLIKGFLD  D++GVD+ LTLMEE GV+PDVVTFSTIM+AWSSAG M KC+EIF+D
Sbjct: 259 FVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFND 318

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MVKA IEPDIH FSILAKGYVRAGEP+KAESILTSMRKYGVHPNVV+ TTVISGWC+A K
Sbjct: 319 MVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAGK 378

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ AM +YEKMCEIG++PNLKTYETL+WGYGEAKQP +AEELLQVMEEKGV PKK T+QL
Sbjct: 379 MEHAMKVYEKMCEIGVSPNLKTYETLIWGYGEAKQPLKAEELLQVMEEKGVFPKKGTMQL 438

Query: 421 VADSWRAIGLAREAK 435
           +AD+WRAIGL  E++
Sbjct: 439 IADAWRAIGLLSESE 453



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 189/368 (51%), Gaps = 1/368 (0%)

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK 129
           ++N     G   EA  IF  + D G KPT  TY TL+         +  L+L+  + ++ 
Sbjct: 19  LMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKV-EEN 77

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
            +KP+   +N ++ A+    +++EA  +  KM  SG +P   T+NTL + Y   G+T  A
Sbjct: 78  GMKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEA 137

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
            ++L  +Q+  V+PN+RT  I+V  +C + NME+A   +Y+M    + P+ V +N+L + 
Sbjct: 138 LKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARA 197

Query: 250 FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
           + +  ++   ++ +  M    V P+  T S I++ +   G M         M + G+ P+
Sbjct: 198 YAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPN 257

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
           + VF+ L KG++   + +  + +LT M + GV P+VV F+T+++ W +A +M +   I+ 
Sbjct: 258 LFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFN 317

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
            M +  I P++  +  L  GY  A +P +AE +L  M + GV P       V   W + G
Sbjct: 318 DMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAG 377

Query: 430 LAREAKRV 437
               A +V
Sbjct: 378 KMEHAMKV 385



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 157/308 (50%), Gaps = 4/308 (1%)

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           V+   +  N+L+     K    EA ++   ++  G +P  +TY TL  A  +        
Sbjct: 13  VRSRTKLMNVLI----GKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSIL 68

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           +++ +++ N ++P+      I++ + + GNM++AM+   +MKE    P    FN+LIKG+
Sbjct: 69  RLISKVEENGMKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGY 128

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
            +   ++   K L  +++ GVKP+  T++ ++ AW +   M +   +   MV +G++PD 
Sbjct: 129 GNAGKTEEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDA 188

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             ++ LA+ Y   GE  +AE ++  M    V PN    + +++G+C    M  A     +
Sbjct: 189 VTYNTLARAYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFR 248

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M E+G+ PNL  + +L+ G+ +       +E+L +MEE GVRP   T   + ++W + G 
Sbjct: 249 MKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGR 308

Query: 431 AREAKRVL 438
             + K + 
Sbjct: 309 MDKCKEIF 316



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 95/189 (50%), Gaps = 2/189 (1%)

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           +LM+E G KP ++T++T++ A +   L      +   + + G++PD  +F+ +   +  +
Sbjct: 38  SLMDE-GHKPTLITYTTLVAALTRQKLFKSILRLISKVEENGMKPDSILFNSIINAFSES 96

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G  ++A  +   M++ G  P    F T+I G+ NA K + A+ + E + + G+ PN +TY
Sbjct: 97  GNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTY 156

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             L+  +   +    A  ++  M   G++P   T   +A ++   G    A+ ++     
Sbjct: 157 NILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAEEMILEM-L 215

Query: 444 DRQSMPNKK 452
           +R+  PN++
Sbjct: 216 NRRVTPNER 224


>gi|147812173|emb|CAN61517.1| hypothetical protein VITISV_033966 [Vitis vinifera]
          Length = 635

 Score =  707 bits (1825), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/557 (61%), Positives = 442/557 (79%), Gaps = 9/557 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MNI++ KG+P E   I + +IE GH+P+L+TYTTL+AALT QK F SI S+IS+VE++GM
Sbjct: 79  MNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGM 138

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PDSI FNA+INA SESGN+ EAMK F KMK+SG KPTTST+NTLIKGYG  G+PEES K
Sbjct: 139 EPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQK 198

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LLZLMSQD+NV+PN RTYN+LVRAWC+K +I +AWNVVYKMVASG+QPDAVTYNT+A AY
Sbjct: 199 LLZLMSQDENVRPNLRTYNVLVRAWCNKXNIMKAWNVVYKMVASGLQPDAVTYNTIATAY 258

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           AQ GE  +AE ++ EMQN+ V+PNERTC II+ GYCKEG +++A++F+YRMK+L + PNL
Sbjct: 259 AQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNL 318

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           VVFNSLIKGF+D  D DGV++ LTLMEEFGVKPDV+TFSTIM+AWS+AG M KC+EIFDD
Sbjct: 319 VVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDD 378

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MVKA I+PD HV+SILAKGYVRAGEP+KAE IL +M K G HPNVVMFTT+I+GWC+A +
Sbjct: 379 MVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVMFTTIINGWCSAGR 438

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ A+ I+EKMCE GI PNLKT+ETL+WGYGEA+QPW++EE+LQ+MEE  V+P+K+T+ L
Sbjct: 439 MEYAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLL 498

Query: 421 VADSWRAIGLAREAKRVLKSAE-EDRQSMPNKKDEIAVESIHRK-QNLSASNSTFLQIPG 478
           VA++WRA GL +EA R+L + + E+     +++D+I V S  +  Q  SAS    LQ+P 
Sbjct: 499 VAEAWRATGLKKEANRILSAVKNEETTHETDREDKIPVGSSEKHYQKPSASFPNQLQLPN 558

Query: 479 VVSSEHNGSSAAKIRSQIVLRS-----DTVWTATKSL-FVNTYGSGVQPMVVCRKQC-SQ 531
           +V S+  GS +A  RS++VL       ++ WTAT+SL   ++   G +  ++C+KQ   Q
Sbjct: 559 LVISDQKGSGSATKRSRMVLGDTDFSLESSWTATRSLSLTHSCTFGARSPIICQKQSHGQ 618

Query: 532 VGTCGQFVNAYRLVFIN 548
           +    Q  ++  LVF+N
Sbjct: 619 LCMYSQLAHSCPLVFLN 635



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 168/327 (51%), Gaps = 7/327 (2%)

Query: 115 PEESLKLLQLMSQD--KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT 172
           P+  ++ +  +S+   + V+   +  NI++     K   +E  +++  ++  G +P  VT
Sbjct: 54  PQSQVRCISCLSKTSCRTVRSRTKLMNIMIE----KGRPQEVQSILDSIIEGGHKPSLVT 109

Query: 173 YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMK 232
           Y TL  A            ++ +++ N + P+      +++ + + GNM++AM++ ++MK
Sbjct: 110 YTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMK 169

Query: 233 ELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM-EEFGVKPDVVTFSTIMDAWSSAGLM 291
           E    P    FN+LIKG+    + +   K L LM ++  V+P++ T++ ++ AW +   +
Sbjct: 170 ESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQDENVRPNLRTYNVLVRAWCNKXNI 229

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            K   +   MV +G++PD   ++ +A  Y + GE  +AE I+  M+   V PN      +
Sbjct: 230 MKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCII 289

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I G+C   K++ A+    +M ++G+ PNL  + +L+ G+ +A       E+L +MEE GV
Sbjct: 290 IGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGV 349

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVL 438
           +P   T   + ++W A G   + + + 
Sbjct: 350 KPDVITFSTIMNAWSAAGFMDKCREIF 376


>gi|225430029|ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like [Vitis vinifera]
          Length = 635

 Score =  706 bits (1822), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/557 (60%), Positives = 443/557 (79%), Gaps = 9/557 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MNI++ KG+P E   I + +IE GH+P+L+TYTTL+AALT QK F SI S+IS+VE++GM
Sbjct: 79  MNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGM 138

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PDSI FNA+INA SESGN+ EAMK F KMK+SG KPTTST+NTLIKGYG  G+PEES K
Sbjct: 139 EPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQK 198

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+LMSQD+NV+PN RTYN+LVRAWC+K +I +AWNVVYKMVASG+QPDAVTYNT+A AY
Sbjct: 199 LLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAY 258

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           AQ GE  +AE ++ EMQN+ V+PNERTC II+ GYCKEG +++A++F+YRMK+L + PNL
Sbjct: 259 AQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNL 318

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           VVFNSLIKGF+D  D DGV++ LTLMEEFGVKPDV+TFSTIM+AWS+AG M KC+EIFDD
Sbjct: 319 VVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDD 378

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MVKA I+PD HV+SILAKGYVRAGEP+KAE IL +M K G HPNVV+FTT+I+GWC+A +
Sbjct: 379 MVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGR 438

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ A+ I+EKMCE GI PNLKT+ETL+WGYGEA+QPW++EE+LQ+MEE  V+P+K+T+ L
Sbjct: 439 MEYAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLL 498

Query: 421 VADSWRAIGLAREAKRVLKSAE-EDRQSMPNKKDEIAVESIHRK-QNLSASNSTFLQIPG 478
           VA++WRA GL +EA R+L + + E+     +++D+I V S+ +  Q  SAS    LQ+P 
Sbjct: 499 VAEAWRATGLKKEANRILSAVKNEEMTHETDREDKIPVGSLEKHYQKPSASFPNQLQLPN 558

Query: 479 VVSSEHNGSSAAKIRSQIVLRS-----DTVWTATKSL-FVNTYGSGVQPMVVCRKQC-SQ 531
           +V S+  GS +A  RS++VL       ++ WTAT+SL   ++   G +  ++C+KQ   Q
Sbjct: 559 LVISDQKGSGSATKRSRMVLGDTDFSLESSWTATRSLSLTHSCTFGARSPIICQKQSHGQ 618

Query: 532 VGTCGQFVNAYRLVFIN 548
           +    Q  ++  LVF+N
Sbjct: 619 LCMYSQLAHSCPLVFLN 635



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 168/327 (51%), Gaps = 7/327 (2%)

Query: 115 PEESLKLLQLMSQD--KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT 172
           P+  ++ +  +S+   + V+   +  NI++     K   +E  +++  ++  G +P  VT
Sbjct: 54  PQSQVRCISCLSKTSCRTVRSRTKLMNIMIE----KGRPQEVQSILDSIIEGGHKPSLVT 109

Query: 173 YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMK 232
           Y TL  A            ++ +++ N + P+      +++ + + GNM++AM++ ++MK
Sbjct: 110 YTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMK 169

Query: 233 ELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM-EEFGVKPDVVTFSTIMDAWSSAGLM 291
           E    P    FN+LIKG+    + +   K L LM ++  V+P++ T++ ++ AW +   +
Sbjct: 170 ESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNI 229

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            K   +   MV +G++PD   ++ +A  Y + GE  +AE I+  M+   V PN      +
Sbjct: 230 MKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCII 289

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I G+C   K++ A+    +M ++G+ PNL  + +L+ G+ +A       E+L +MEE GV
Sbjct: 290 IGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGV 349

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVL 438
           +P   T   + ++W A G   + + + 
Sbjct: 350 KPDVITFSTIMNAWSAAGFMDKCREIF 376


>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Cucumis sativus]
 gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Cucumis sativus]
          Length = 609

 Score =  697 bits (1798), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/534 (62%), Positives = 424/534 (79%), Gaps = 16/534 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MNILV +GKP EA +IFN L+E+GHRPT +TYT LVAALTRQKRFK+I  L+S++E+ G+
Sbjct: 64  MNILVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGI 123

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPDSIL NA+INA SESGNV EAM+IFQKM++SGCKPTTST+NTLIKGYG + KPEES+K
Sbjct: 124 KPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMK 183

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+LM++  N+KPN+RTYNILV A C K SI+EAWNVV++M+ASG+QPD VTYNTLARAY
Sbjct: 184 LLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAY 243

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           AQ GET +AE ++ +M N +V PNERTCGIIV GYC++GN+ +A+R +YRM++L +HPNL
Sbjct: 244 AQDGETNKAESIIVDMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNL 303

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V+FNSLIKGFLDI DSDGVDKALT+MEE GVKPDV+TFSTIM+ WSSAG M KCQEIFDD
Sbjct: 304 VIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDD 363

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+K+GIEPDIHVFSILAKG+VRAGEP KAES+L  M KYGV PNVV+FTT+ISGWC A K
Sbjct: 364 MLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGK 423

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M++A  ++E MC++ ++PNLKT+ETL+WGYGEAKQPWRAEE+LQ+MEE  V P+ ST++L
Sbjct: 424 MEKAWKVFEHMCDMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEMNVVPENSTLKL 483

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVV 480
           V+++WR+IG+  +AK   +  EE+     N       E IH ++   AS S  L+   V+
Sbjct: 484 VSEAWRSIGMVNDAK--AERTEENEIPWRNS------ERIHEEEGPHASYSNLLKSEIVI 535

Query: 481 SSEHNGSSAAKIRSQIVLRSDTV------WTATKSLFVNTYGSGVQPMVVCRKQ 528
            S  NGSS ++ RS+ + +   V       T+T  L   T  S  +P+++C  Q
Sbjct: 536 VSNGNGSSYSQTRSRTLPKGVEVPSGRPRSTSTSMLLRQTRPS--RPLILCHIQ 587



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 161/380 (42%), Gaps = 75/380 (19%)

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           V+   +  NILV     +   +EA  +   +V  G +P  VTY  L  A  +        
Sbjct: 57  VRSRTKLMNILVE----RGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAIS 112

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            +L EM+   ++P+      I++ + + GN+++AM    +M+E    P    FN+LIKG+
Sbjct: 113 GLLSEMEETGIKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGY 172

Query: 251 LDIKDSDGVDKALTLMEEF------------------------------------GVKPD 274
             I+  +   K L LM                                       GV+PD
Sbjct: 173 GIIRKPEESMKLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPD 232

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKA------------------------------ 304
           VVT++T+  A++  G   K + I  DM+                                
Sbjct: 233 VVTYNTLARAYAQDGETNKAESIIVDMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVY 292

Query: 305 -----GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
                GI P++ +F+ L KG++  G+    +  LT M + GV P+V+ F+T+++GW +A 
Sbjct: 293 RMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAG 352

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           +M +   I++ M + GI P++  +  L  G+  A +P +AE LL  M + GVRP      
Sbjct: 353 RMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFT 412

Query: 420 LVADSWRAIGLAREAKRVLK 439
            +   W   G   +A +V +
Sbjct: 413 TIISGWCTAGKMEKAWKVFE 432


>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
 gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
          Length = 552

 Score =  687 bits (1773), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/557 (60%), Positives = 422/557 (75%), Gaps = 33/557 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN LV KGKP EA  IF  LIE GH+P+LI+YTTL+AALT QKRF SI S+IS+VE++GM
Sbjct: 20  MNFLVEKGKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENGM 79

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PDSI FNA+INA SESGN++ AM+ F KM+++G KPTTSTYNTLIKGYG  GKPEES+K
Sbjct: 80  NPDSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVK 139

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+LMSQ+ NVKPN RTYN+LVRAWC+K  I EAWNVVYKM+ASGIQPD VTYNT+A AY
Sbjct: 140 LLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAY 199

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           AQ G   +AE ++ EMQNN V+PNERTCGII+SGYCKEG + +A+RF YRMKEL +HPNL
Sbjct: 200 AQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNL 259

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V+FNSLIKGF+ I D DGVD+ L LMEEFGVKPDV+TFSTIM+AWS+AG M KC+EIFDD
Sbjct: 260 VIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDD 319

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MVKAGIEPD H +SILAKGYVRA EP+KAE +LT+M K G  PNVV+FTTVISGWC+A K
Sbjct: 320 MVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGK 379

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M  A+ +++KMC+ GI+PNLKT+ETL+WG+ EA+QPW+AEE+LQ+M E  V+P+KST+ L
Sbjct: 380 MDYAVRVFDKMCQRGISPNLKTFETLIWGFAEARQPWKAEEILQIMTEFEVQPEKSTMLL 439

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPNKKD----EIAV---ESIHRKQNLSASNSTF 473
           VA++WRA G+ +EA R+L +   +R+ M N+K+    EI V   E +++KQ      S  
Sbjct: 440 VAEAWRATGMTKEANRLLGT--RNRKEMTNRKEALEKEIPVGNLEKLYQKQTEGVLYSNI 497

Query: 474 LQIPGVVSSEHNGSSAAKIRSQIVLRSDTVWTATKSL-FVNTYGSGVQPMVVCRKQC-SQ 531
           LQIP   S                      W AT S+   ++   G++  ++CRKQ  +Q
Sbjct: 498 LQIPSTCS----------------------WLATGSMSLSHSCKFGLRLPIICRKQSQAQ 535

Query: 532 VGTCGQFVNAYRLVFIN 548
            G  GQ   +   VF+N
Sbjct: 536 HGMYGQLAQSCTAVFLN 552



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 158/311 (50%), Gaps = 5/311 (1%)

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           + V+   +  N LV     K   +EA ++ Y ++  G +P  ++Y TL  A         
Sbjct: 11  RTVRSRTKLMNFLVE----KGKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDS 66

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
              ++ +++ N + P+      +++ + + GNME AM   ++M+E  + P    +N+LIK
Sbjct: 67  IYSIISQVEENGMNPDSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIK 126

Query: 249 GFLDIKDSDGVDKALTLMEEFG-VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           G+      +   K L LM + G VKP++ T++ ++ AW +   + +   +   M+ +GI+
Sbjct: 127 GYGIAGKPEESVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQ 186

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+  ++ +A  Y + G   +AE ++  M+  GV PN      ++SG+C   +++ A+  
Sbjct: 187 PDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRF 246

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
             +M E+GI+PNL  + +L+ G+         +E+L +MEE GV+P   T   + ++W  
Sbjct: 247 AYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWST 306

Query: 428 IGLAREAKRVL 438
            G   + + + 
Sbjct: 307 AGFMEKCREIF 317


>gi|296081889|emb|CBI20894.3| unnamed protein product [Vitis vinifera]
          Length = 608

 Score =  686 bits (1771), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/552 (59%), Positives = 429/552 (77%), Gaps = 26/552 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MNI++ KG+P E   I + +IE GH+P+L+TYTTL+AALT QK F SI S+IS+VE++GM
Sbjct: 79  MNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGM 138

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PDSI FNA+INA SESGN+ EAMK F KMK+SG KPTTST+NTLIKGYG  G+PEES K
Sbjct: 139 EPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQK 198

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+LMSQD+NV+PN RTYN+LVRAWC+K +I +AWNVVYKMVASG+QPDAVTYNT+A AY
Sbjct: 199 LLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAY 258

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           AQ GE  +AE ++ EMQN+ V+PNERTC II+ GYCKEG +++A++F+YRMK+L + PNL
Sbjct: 259 AQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNL 318

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           VVFNSLIKGF+D  D DGV++ LTLMEEFGVKPDV+TFSTIM+AWS+AG M KC+EIFDD
Sbjct: 319 VVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDD 378

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MVKA I+PD HV+SILAKGYVRAGEP+KAE IL +M K G HPNVV+FTT+I+GWC+A +
Sbjct: 379 MVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGR 438

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ A+ I+EKMCE GI PNLKT+ETL+WGYGEA+QPW++EE+LQ+MEE  V+P+K+T+ L
Sbjct: 439 MEYAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLL 498

Query: 421 VADSWRAIGLAREAKRVLKSAE-EDRQSMPNKKDEIAVESIHRK-QNLSASNSTFLQIPG 478
           VA++WRA GL +EA R+L + + E+     +++D+I V S+ +  Q  SAS    LQ+P 
Sbjct: 499 VAEAWRATGLKKEANRILSAVKNEEMTHETDREDKIPVGSLEKHYQKPSASFPNQLQLPN 558

Query: 479 VVSSEHNGSSAAKIRSQIVLRSDTVWTATKSL-FVNTYGSGVQPMVVCRKQC-SQVGTCG 536
           + S                      WTAT+SL   ++   G +  ++C+KQ   Q+    
Sbjct: 559 LSS----------------------WTATRSLSLTHSCTFGARSPIICQKQSHGQLCMYS 596

Query: 537 QFVNAYRLVFIN 548
           Q  ++  LVF+N
Sbjct: 597 QLAHSCPLVFLN 608



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 168/327 (51%), Gaps = 7/327 (2%)

Query: 115 PEESLKLLQLMSQD--KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT 172
           P+  ++ +  +S+   + V+   +  NI++     K   +E  +++  ++  G +P  VT
Sbjct: 54  PQSQVRCISCLSKTSCRTVRSRTKLMNIMIE----KGRPQEVQSILDSIIEGGHKPSLVT 109

Query: 173 YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMK 232
           Y TL  A            ++ +++ N + P+      +++ + + GNM++AM++ ++MK
Sbjct: 110 YTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMK 169

Query: 233 ELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM-EEFGVKPDVVTFSTIMDAWSSAGLM 291
           E    P    FN+LIKG+    + +   K L LM ++  V+P++ T++ ++ AW +   +
Sbjct: 170 ESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNI 229

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            K   +   MV +G++PD   ++ +A  Y + GE  +AE I+  M+   V PN      +
Sbjct: 230 MKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCII 289

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I G+C   K++ A+    +M ++G+ PNL  + +L+ G+ +A       E+L +MEE GV
Sbjct: 290 IGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGV 349

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVL 438
           +P   T   + ++W A G   + + + 
Sbjct: 350 KPDVITFSTIMNAWSAAGFMDKCREIF 376


>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 584

 Score =  682 bits (1759), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/529 (63%), Positives = 420/529 (79%), Gaps = 21/529 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L+ KGKPHEA  IFN L EEGH+PT+ITYTTLVAALTR KRF SI SL+SKVE++G+
Sbjct: 50  MSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENGV 109

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPDSILFNAMINA S+SG V EAMKIF+KMK+ GCKPTTST+NTLIKG+G VG+P E++K
Sbjct: 110 KPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMK 169

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL++M QD NVKPN+RTYNIL++AWC+KN +EEAWNV++KMV SG+QPD VTYNTLARA+
Sbjct: 170 LLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAF 229

Query: 181 AQYGETYRAEQMLFEMQ--NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           AQ GET  AE+++ +MQ  NN+V+PNERTCGII+ GYCKEGNM +A+RFLY+MKEL VHP
Sbjct: 230 AQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHP 289

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           N VVFNSLIKG+LDI D+DGV++ALTLMEEFG+KPDVVT+STIM+AWSS+GLM  C+EIF
Sbjct: 290 NPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIF 349

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           DDMVKA IEPDI  +SILAKGYVRAG+P KAE++L SM KYG+  NVV+FTT+ISGWC A
Sbjct: 350 DDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAA 409

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            KM  A+ +YEKM E+G   NLKTYETL+WGYGEAKQPW+AEELL  MEE GV P+ STI
Sbjct: 410 GKMDCALRLYEKMNEMGTPLNLKTYETLIWGYGEAKQPWKAEELLVTMEESGVAPEMSTI 469

Query: 419 QLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNS-TFLQIP 477
           +LV           +        +E    +P +    +++ I++KQ L AS S   LQ+P
Sbjct: 470 ELV-----------QMLEEESEFDESFDKIPGQ----SLDRIYKKQKLGASQSNNLLQMP 514

Query: 478 GVVSSE-HNGSSAAKIRSQIVLRS-DTVWTATKSL-FVNTYGSGVQPMV 523
            +V ++    S+ A I+SQ+++++  TV  AT S+ FV     GVQP++
Sbjct: 515 DIVVAQPERTSNNANIKSQMIVKTYGTVRNATVSMVFVRKNSYGVQPLI 563



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 118/236 (50%), Gaps = 3/236 (1%)

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++S   ++G   +A+     + E    P ++ + +L+     +K  + +   L+ +EE G
Sbjct: 49  LMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENG 108

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           VKPD + F+ +++A+S +G + +  +IF  M + G +P    F+ L KG+   G P +A 
Sbjct: 109 VKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAM 168

Query: 331 SILTSMRKYG-VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
            +L  M + G V PN   +  +I  WC   +++ A ++  KM   G+ P++ TY TL   
Sbjct: 169 KLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARA 228

Query: 390 YGEAKQPWRAEELLQVMEE--KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           + +  +   AE L+  M++    V+P + T  ++   +   G   EA R L   +E
Sbjct: 229 FAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKE 284



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 79/152 (51%), Gaps = 1/152 (0%)

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           V++ + +M      G   +   IF+ + + G +P I  ++ L     R        S+L+
Sbjct: 43  VISRTKLMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLS 102

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            + + GV P+ ++F  +I+ + ++ K+  AM I+ KM E G  P   T+ TL+ G+G   
Sbjct: 103 KVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVG 162

Query: 395 QPWRAEELLQVMEEKG-VRPKKSTIQLVADSW 425
           +P  A +LL++M + G V+P + T  ++  +W
Sbjct: 163 RPHEAMKLLEMMIQDGNVKPNERTYNILIQAW 194


>gi|3107905|dbj|BAA25906.1| leaf protein [Ipomoea nil]
          Length = 665

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/594 (55%), Positives = 431/594 (72%), Gaps = 53/594 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L+ +GKP E H I   L EEGHRPTL+TYTT++AALT QKRFKSI  L+ KVE++G+
Sbjct: 75  MKTLIERGKPQEVHSITKGLTEEGHRPTLVTYTTVLAALTLQKRFKSIPLLLKKVEQNGL 134

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PDSI FN MINA  ESGNV EAMKIF+KM++ GCKPT ST+N LIKG+G +GKPEES K
Sbjct: 135 RPDSIFFNPMINAFCESGNVKEAMKIFRKMREKGCKPTASTFNALIKGFGIIGKPEESSK 194

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL++MS+++N+KP+DRTYNILV+AWC+KN+IE+AW VV++MV +G++PD VTYNT+ARAY
Sbjct: 195 LLEIMSREENIKPDDRTYNILVQAWCNKNNIEKAWGVVHRMVGAGLKPDVVTYNTIARAY 254

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+  ET RA +++ +MQNN+V PN RTCGI+V GY KEGNM DA++F+Y+M+   VHPNL
Sbjct: 255 ARGKETSRAAELISQMQNNKVAPNVRTCGIVVDGYSKEGNMADALKFIYKMQGFGVHPNL 314

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            +FNSL+KGFLDI D+ GVD+ LTLM+EFGVKPDVVT+STIM+AWSSAGLM KC+E+F D
Sbjct: 315 FIFNSLLKGFLDITDTKGVDETLTLMQEFGVKPDVVTYSTIMNAWSSAGLMEKCEEMFQD 374

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+K+GIEPD H FSILAKGYVRAGEP+KAE++L +M  +G HPNVVMFTT+ISGWC+A K
Sbjct: 375 MIKSGIEPDNHAFSILAKGYVRAGEPKKAEALLEAMATHGAHPNVVMFTTIISGWCSAAK 434

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ A+ +Y++MC + + PNL T+ETL+WGYGEA +PW+AEELLQ+MEE GV P+K+T+QL
Sbjct: 435 MEDALRVYDRMCRMDVQPNLNTFETLIWGYGEANEPWKAEELLQIMEEMGVLPRKNTVQL 494

Query: 421 VADSWRAIGLAREAKRVL--------------KSAEEDRQ------------SMP----- 449
           VAD+WRAIG   EAKR+L              K  EED Q            ++P     
Sbjct: 495 VADAWRAIGFINEAKRILNDDQSSVLIPRTDEKPVEEDLQRVYQEKTNGSYKTLPDNDKR 554

Query: 450 ---------NKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSEHNGSSAAKIRSQIVLRS 500
                    N++D +     H +Q +  S S+  ++ G   +  NGSS   +RSQ   +S
Sbjct: 555 PTLNAKMVENREDNVH-RGDHHEQIMKGSFSSLPEMTGSTITNQNGSSTFTLRSQTTPKS 613

Query: 501 DTVWTATKS--------LFVNTYGSGVQP-MVVCRKQCSQVGTCGQFVNAYRLV 545
               TATKS        L  N  G    P MV+ R    Q+G   +++N+ RLV
Sbjct: 614 SR--TATKSMNMAAKAILISNNCGFKPNPLMVIQRPLHVQIG-IHRYINSCRLV 664



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 152/305 (49%), Gaps = 1/305 (0%)

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           R+   L++    +   +E  ++   +   G +P  VTY T+  A            +L +
Sbjct: 69  RSRTKLMKTLIERGKPQEVHSITKGLTEEGHRPTLVTYTTVLAALTLQKRFKSIPLLLKK 128

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           ++ N +RP+      +++ +C+ GN+++AM+   +M+E    P    FN+LIKGF  I  
Sbjct: 129 VEQNGLRPDSIFFNPMINAFCESGNVKEAMKIFRKMREKGCKPTASTFNALIKGFGIIGK 188

Query: 256 SDGVDKALTLM-EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
            +   K L +M  E  +KPD  T++ ++ AW +   + K   +   MV AG++PD+  ++
Sbjct: 189 PEESSKLLEIMSREENIKPDDRTYNILVQAWCNKNNIEKAWGVVHRMVGAGLKPDVVTYN 248

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            +A+ Y R  E  +A  +++ M+   V PNV     V+ G+     M  A+    KM   
Sbjct: 249 TIARAYARGKETSRAAELISQMQNNKVAPNVRTCGIVVDGYSKEGNMADALKFIYKMQGF 308

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G++PNL  + +LL G+ +       +E L +M+E GV+P   T   + ++W + GL  + 
Sbjct: 309 GVHPNLFIFNSLLKGFLDITDTKGVDETLTLMQEFGVKPDVVTYSTIMNAWSSAGLMEKC 368

Query: 435 KRVLK 439
           + + +
Sbjct: 369 EEMFQ 373


>gi|29294052|gb|AAO73889.1| protein kinase family [Arabidopsis thaliana]
          Length = 854

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 292/433 (67%), Positives = 367/433 (84%), Gaps = 2/433 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L+ +G+P EAH IFN LIEEGH+P+LITYTTLV ALTRQK F S+LSLISKVEK+G+
Sbjct: 349 MNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGL 408

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD+ILFNA+INA SESGN+D+AMKIF+KMK+SGCKPT ST+NTLIKGYG +GK EES +
Sbjct: 409 KPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSR 468

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL +M +D+ ++PNDRT NILV+AWC++  IEEAWN+VYKM + G++PD VT+NTLA+AY
Sbjct: 469 LLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAY 528

Query: 181 AQYGETYRAEQMLF-EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           A+ G T  AE M+   M +N+V+PN RTCG IV+GYC+EG ME+A+RF YRMKEL VHPN
Sbjct: 529 ARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPN 588

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           L VFNSLIKGFL+I D DGV + + LMEEFGVKPDVVTFST+M+AWSS G M +C+EI+ 
Sbjct: 589 LFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYT 648

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           DM++ GI+PDIH FSILAKGY RAGEP+KAE IL  MRK+GV PNVV++T +ISGWC+A 
Sbjct: 649 DMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAG 708

Query: 360 KMQRAMSIYEKMCEI-GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
           +M++AM +Y+KMC I G++PNL TYETL+WG+GEAKQPW+AEELL+ ME K V P + T+
Sbjct: 709 EMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTM 768

Query: 419 QLVADSWRAIGLA 431
           QL+AD W++IG++
Sbjct: 769 QLIADGWKSIGVS 781



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 202/374 (54%), Gaps = 7/374 (1%)

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ-D 128
           ++N   E G   EA  IF  + + G KP+  TY TL+     + + +    LL L+S+ +
Sbjct: 348 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTA---LTRQKHFHSLLSLISKVE 404

Query: 129 KN-VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           KN +KP+   +N ++ A     ++++A  +  KM  SG +P A T+NTL + Y + G+  
Sbjct: 405 KNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLE 464

Query: 188 RAEQML-FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            + ++L   +++  ++PN+RTC I+V  +C +  +E+A   +Y+M+   V P++V FN+L
Sbjct: 465 ESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTL 524

Query: 247 IKGFLDIKDS-DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
            K +  I  +    D  +  M    VKP+V T  TI++ +   G M +    F  M + G
Sbjct: 525 AKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELG 584

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + P++ VF+ L KG++   +      ++  M ++GV P+VV F+T+++ W +   M+R  
Sbjct: 585 VHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCE 644

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            IY  M E GI+P++  +  L  GY  A +P +AE++L  M + GVRP       +   W
Sbjct: 645 EIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGW 704

Query: 426 RAIGLAREAKRVLK 439
            + G  ++A +V K
Sbjct: 705 CSAGEMKKAMQVYK 718



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 77/153 (50%), Gaps = 1/153 (0%)

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           DV + + +M+     G   +   IF+ +++ G +P +  ++ L     R        S++
Sbjct: 341 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 400

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
           + + K G+ P+ ++F  +I+    +  + +AM I+EKM E G  P   T+ TL+ GYG+ 
Sbjct: 401 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 460

Query: 394 KQPWRAEELLQVM-EEKGVRPKKSTIQLVADSW 425
            +   +  LL +M  ++ ++P   T  ++  +W
Sbjct: 461 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAW 493



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 100/241 (41%), Gaps = 24/241 (9%)

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D+   + L  G +  G PQ+A SI  ++ + G  P+++ +TT+++           +S+ 
Sbjct: 341 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 400

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            K+ + G+ P+   +  ++    E+    +A ++ + M+E G +P  ST   +   +  I
Sbjct: 401 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 460

Query: 429 GLAREAKRVLKSAEEDRQSMPNKKD-EIAVES------IHRKQNLSASNSTFLQIPGVVS 481
           G   E+ R+L     D    PN +   I V++      I    N+     ++   P VV+
Sbjct: 461 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 520

Query: 482 SEHNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQPMVVCRKQCSQVGTCGQFVNA 541
                 + A+I S          TA   +      + V+P          V TCG  VN 
Sbjct: 521 FNTLAKAYARIGSTC--------TAEDMIIPRMLHNKVKP---------NVRTCGTIVNG 563

Query: 542 Y 542
           Y
Sbjct: 564 Y 564


>gi|42570531|ref|NP_850859.2| SNF1-like protein kinase [Arabidopsis thaliana]
 gi|75160582|sp|Q8S9D1.1|PP395_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g21222; AltName: Full=SNF1-like protein kinase AtC401
 gi|19071860|dbj|BAB85674.1| SNF1-like protein kinase [Arabidopsis thaliana]
 gi|332005563|gb|AED92946.1| SNF1-like protein kinase [Arabidopsis thaliana]
          Length = 831

 Score =  637 bits (1643), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 292/433 (67%), Positives = 367/433 (84%), Gaps = 2/433 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L+ +G+P EAH IFN LIEEGH+P+LITYTTLV ALTRQK F S+LSLISKVEK+G+
Sbjct: 326 MNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGL 385

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD+ILFNA+INA SESGN+D+AMKIF+KMK+SGCKPT ST+NTLIKGYG +GK EES +
Sbjct: 386 KPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSR 445

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL +M +D+ ++PNDRT NILV+AWC++  IEEAWN+VYKM + G++PD VT+NTLA+AY
Sbjct: 446 LLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAY 505

Query: 181 AQYGETYRAEQMLF-EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           A+ G T  AE M+   M +N+V+PN RTCG IV+GYC+EG ME+A+RF YRMKEL VHPN
Sbjct: 506 ARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPN 565

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           L VFNSLIKGFL+I D DGV + + LMEEFGVKPDVVTFST+M+AWSS G M +C+EI+ 
Sbjct: 566 LFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYT 625

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           DM++ GI+PDIH FSILAKGY RAGEP+KAE IL  MRK+GV PNVV++T +ISGWC+A 
Sbjct: 626 DMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAG 685

Query: 360 KMQRAMSIYEKMCEI-GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
           +M++AM +Y+KMC I G++PNL TYETL+WG+GEAKQPW+AEELL+ ME K V P + T+
Sbjct: 686 EMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTM 745

Query: 419 QLVADSWRAIGLA 431
           QL+AD W++IG++
Sbjct: 746 QLIADGWKSIGVS 758



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 202/374 (54%), Gaps = 7/374 (1%)

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ-D 128
           ++N   E G   EA  IF  + + G KP+  TY TL+     + + +    LL L+S+ +
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTA---LTRQKHFHSLLSLISKVE 381

Query: 129 KN-VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           KN +KP+   +N ++ A     ++++A  +  KM  SG +P A T+NTL + Y + G+  
Sbjct: 382 KNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLE 441

Query: 188 RAEQML-FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            + ++L   +++  ++PN+RTC I+V  +C +  +E+A   +Y+M+   V P++V FN+L
Sbjct: 442 ESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTL 501

Query: 247 IKGFLDIKDS-DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
            K +  I  +    D  +  M    VKP+V T  TI++ +   G M +    F  M + G
Sbjct: 502 AKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELG 561

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + P++ VF+ L KG++   +      ++  M ++GV P+VV F+T+++ W +   M+R  
Sbjct: 562 VHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCE 621

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            IY  M E GI+P++  +  L  GY  A +P +AE++L  M + GVRP       +   W
Sbjct: 622 EIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGW 681

Query: 426 RAIGLAREAKRVLK 439
            + G  ++A +V K
Sbjct: 682 CSAGEMKKAMQVYK 695



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 77/153 (50%), Gaps = 1/153 (0%)

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           DV + + +M+     G   +   IF+ +++ G +P +  ++ L     R        S++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
           + + K G+ P+ ++F  +I+    +  + +AM I+EKM E G  P   T+ TL+ GYG+ 
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437

Query: 394 KQPWRAEELLQVM-EEKGVRPKKSTIQLVADSW 425
            +   +  LL +M  ++ ++P   T  ++  +W
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAW 470



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 100/241 (41%), Gaps = 24/241 (9%)

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D+   + L  G +  G PQ+A SI  ++ + G  P+++ +TT+++           +S+ 
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            K+ + G+ P+   +  ++    E+    +A ++ + M+E G +P  ST   +   +  I
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437

Query: 429 GLAREAKRVLKSAEEDRQSMPNKKD-EIAVES------IHRKQNLSASNSTFLQIPGVVS 481
           G   E+ R+L     D    PN +   I V++      I    N+     ++   P VV+
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497

Query: 482 SEHNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQPMVVCRKQCSQVGTCGQFVNA 541
                 + A+I S          TA   +      + V+P          V TCG  VN 
Sbjct: 498 FNTLAKAYARIGSTC--------TAEDMIIPRMLHNKVKP---------NVRTCGTIVNG 540

Query: 542 Y 542
           Y
Sbjct: 541 Y 541


>gi|19071826|dbj|BAB85657.1| PnC401 homologue [Arabidopsis thaliana]
          Length = 831

 Score =  635 bits (1639), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 291/433 (67%), Positives = 367/433 (84%), Gaps = 2/433 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L+ +G+P EAH IFN LIEEGH+P+LITYTTLV ALTRQK F S+LSLISKVEK+G+
Sbjct: 326 MNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGL 385

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD+ILFNA+INA SESGN+D+AMKIF+KMK+SGCKPT ST+NTLIKGYG +GK EES +
Sbjct: 386 KPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSR 445

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL +M +D+ ++PNDRT NILV+AWC++  IEEAWN+VYKM + G++PD VT+NTLA+AY
Sbjct: 446 LLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAY 505

Query: 181 AQYGETYRAEQMLF-EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           A+ G T  AE M+   M +N+V+PN RTCG IV+GYC+EG ME+A+RF YRMKEL VHPN
Sbjct: 506 ARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPN 565

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           L VFNSLIKGFL+I D DGV + + LMEEFGVKPDVVTFST+M+AWSS G M +C+EI+ 
Sbjct: 566 LFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYT 625

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           DM++ GI+PDIH FSILAKGY RAGEP+KA+ IL  MRK+GV PNVV++T +ISGWC+A 
Sbjct: 626 DMLEGGIDPDIHAFSILAKGYARAGEPEKAKQILNQMRKFGVRPNVVIYTQIISGWCSAG 685

Query: 360 KMQRAMSIYEKMCEI-GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
           +M++AM +Y+KMC I G++PNL TYETL+WG+GEAKQPW+AEELL+ ME K V P + T+
Sbjct: 686 EMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTM 745

Query: 419 QLVADSWRAIGLA 431
           QL+AD W++IG++
Sbjct: 746 QLIADGWKSIGVS 758



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 202/374 (54%), Gaps = 7/374 (1%)

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ-D 128
           ++N   E G   EA  IF  + + G KP+  TY TL+     + + +    LL L+S+ +
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTA---LTRQKHFHSLLSLISKVE 381

Query: 129 KN-VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           KN +KP+   +N ++ A     ++++A  +  KM  SG +P A T+NTL + Y + G+  
Sbjct: 382 KNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLE 441

Query: 188 RAEQML-FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            + ++L   +++  ++PN+RTC I+V  +C +  +E+A   +Y+M+   V P++V FN+L
Sbjct: 442 ESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTL 501

Query: 247 IKGFLDIKDS-DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
            K +  I  +    D  +  M    VKP+V T  TI++ +   G M +    F  M + G
Sbjct: 502 AKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELG 561

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + P++ VF+ L KG++   +      ++  M ++GV P+VV F+T+++ W +   M+R  
Sbjct: 562 VHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCE 621

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            IY  M E GI+P++  +  L  GY  A +P +A+++L  M + GVRP       +   W
Sbjct: 622 EIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAKQILNQMRKFGVRPNVVIYTQIISGW 681

Query: 426 RAIGLAREAKRVLK 439
            + G  ++A +V K
Sbjct: 682 CSAGEMKKAMQVYK 695



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 77/153 (50%), Gaps = 1/153 (0%)

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           DV + + +M+     G   +   IF+ +++ G +P +  ++ L     R        S++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
           + + K G+ P+ ++F  +I+    +  + +AM I+EKM E G  P   T+ TL+ GYG+ 
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437

Query: 394 KQPWRAEELLQVM-EEKGVRPKKSTIQLVADSW 425
            +   +  LL +M  ++ ++P   T  ++  +W
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAW 470



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 100/241 (41%), Gaps = 24/241 (9%)

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D+   + L  G +  G PQ+A SI  ++ + G  P+++ +TT+++           +S+ 
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            K+ + G+ P+   +  ++    E+    +A ++ + M+E G +P  ST   +   +  I
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437

Query: 429 GLAREAKRVLKSAEEDRQSMPNKKD-EIAVES------IHRKQNLSASNSTFLQIPGVVS 481
           G   E+ R+L     D    PN +   I V++      I    N+     ++   P VV+
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497

Query: 482 SEHNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQPMVVCRKQCSQVGTCGQFVNA 541
                 + A+I S          TA   +      + V+P          V TCG  VN 
Sbjct: 498 FNTLAKAYARIGSTC--------TAEDMIIPRMLHNKVKP---------NVRTCGTIVNG 540

Query: 542 Y 542
           Y
Sbjct: 541 Y 541


>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like [Glycine max]
          Length = 632

 Score =  628 bits (1620), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 307/561 (54%), Positives = 408/561 (72%), Gaps = 20/561 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MNIL+  GKP EA  IF  LIE GH+P+L TYTTL+ ALT QK FK I S++S VE+  M
Sbjct: 79  MNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQM 138

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPDSI FNA+INA +ESGN+++A K+ QKMK+SG KP+  TYNTLIKGYG  GKP+ES+K
Sbjct: 139 KPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMK 198

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL LMS + NVKPN +TYN+L+RA C   +I EAWNVVYKM ASG+QPD VT+NT+A AY
Sbjct: 199 LLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAY 258

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           AQ G+T +AE M+ EMQ N ++PNERTC II+SGYC+EG +++A+RF+YRMK+L + PNL
Sbjct: 259 AQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDLGMQPNL 318

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +V NSL+ GF+D+ D DGVD+ L LMEEF ++PDV+T+STIM+AWS AG + KC+EI+++
Sbjct: 319 IVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYNN 378

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+K+G++PD H +SILAKGYVRA E +KAE +LT M K GVHPNVV+FTTVISGWC+  +
Sbjct: 379 MLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVISGWCSVGR 438

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M  AM +++KM E G++PNLKT+ETL+WGY EAKQPW+AE +LQ+MEE  V+PKKSTI L
Sbjct: 439 MDNAMRVFDKMGEFGVSPNLKTFETLIWGYAEAKQPWKAEGMLQIMEEFHVQPKKSTILL 498

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAV---ESIHRKQNLSASNSTFLQIP 477
           VA++WR  G    AK +L++ +    +   K D       E I++K + +A   + LQIP
Sbjct: 499 VAEAWRFAGFKERAKTLLRTVKAKMANSIGKDDNKPAKMSEKIYQKPHTNAPFCSLLQIP 558

Query: 478 GVVSSEHNGSSAAKIRSQIVLRSDTVWTATKSLFVNT----------YGSGVQPMVVCRK 527
            + S++  GS+    R++ +LR   V T    L + T          YG G    ++ ++
Sbjct: 559 SISSTDQKGSALTSRRNRRLLRDGAVET----LLLTTKFKCHPQICRYGEGFS--IMGKQ 612

Query: 528 QCSQVGTCGQFVNAYRLVFIN 548
              Q GT  QF N+   VF+N
Sbjct: 613 FQGQHGTY-QFANSCTAVFLN 632



 Score = 38.9 bits (89), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 48/95 (50%)

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           T V++    + K Q A+ I++ + E G  P+L TY TLL      K       ++ ++EE
Sbjct: 76  TKVMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEE 135

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           K ++P       + +++   G   +AK+V++  +E
Sbjct: 136 KQMKPDSIFFNALINAFAESGNMEDAKKVVQKMKE 170


>gi|297808179|ref|XP_002871973.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317810|gb|EFH48232.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 831

 Score =  618 bits (1593), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 309/541 (57%), Positives = 404/541 (74%), Gaps = 37/541 (6%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L+ +G+P EAH IFN LIEEGH+P++ITYTTLV ALTRQK F S+LSLISKV+K+G+
Sbjct: 326 MNGLIERGRPQEAHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVQKNGL 385

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD+ILFNA+INA SESGN+D+AMKIF+KMK+SGCKPT ST+NTLIKGYG +GK EES +
Sbjct: 386 RPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSR 445

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL++M +D+ ++PNDRT NILV+AWC++  IEEAWN+VYKM + G++PDAVT+NTLARAY
Sbjct: 446 LLEMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSFGVKPDAVTFNTLARAY 505

Query: 181 AQYGETYRAEQMLF-EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           ++ G T  AE M+   M +N+V+PN RTCG IV+GYC+EG ME+A+RF YRMKEL VHPN
Sbjct: 506 SRIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPN 565

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           L VFNSLIKGFL+I D DGV + + LMEEFGVKPDVVTFST+M+AWSS G M +C+EI+ 
Sbjct: 566 LFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYR 625

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           DM++ GI+PDIH FSILAKGY RAGEP+KAE IL  MRK+GV PNVV++T +ISGWC+A 
Sbjct: 626 DMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAG 685

Query: 360 KMQRAMSIYEKM-CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
           +M++AM +Y KM   +G++PNL TYETL+WG+GEAKQPW+AEELL+ MEEK V P + T+
Sbjct: 686 EMKKAMQVYNKMRGSVGLSPNLTTYETLIWGFGEAKQPWKAEELLKEMEEKNVVPTRKTM 745

Query: 419 QLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPG 478
           QL+AD W++IG++                  N  D   + S       S S S+ L IP 
Sbjct: 746 QLIADGWKSIGVS------------------NSNDANTLGS-------SFSTSSKLNIPN 780

Query: 479 VVSSEHNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQPMVVCRKQCSQVGTCGQF 538
            ++S  +   +  +  +  L   + +   +S+FV          V+CR Q  + G   +F
Sbjct: 781 NIASSRSPLFSKGMPEKPKLCIKSQFGLRQSVFV----------VLCRDQIGEAGRFCKF 830

Query: 539 V 539
           +
Sbjct: 831 M 831



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 162/374 (43%), Gaps = 72/374 (19%)

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           R+   L+     +   +EA ++   ++  G +P  +TY TL  A  +    +    ++ +
Sbjct: 320 RSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISK 379

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           +Q N +RP+      I++   + GN++ AM+   +MKE    P    FN+LIKG+  I  
Sbjct: 380 VQKNGLRPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGK 439

Query: 256 SDGVDKALTL------------------------------------MEEFGVKPDVVTFS 279
            +   + L +                                    M+ FGVKPD VTF+
Sbjct: 440 LEESSRLLEMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSFGVKPDAVTFN 499

Query: 280 TIMDAWSSAG----------------------------LMGKCQE--------IFDDMVK 303
           T+  A+S  G                            + G C+E         F  M +
Sbjct: 500 TLARAYSRIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKE 559

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ P++ VF+ L KG++   +      ++  M ++GV P+VV F+T+++ W +   M+R
Sbjct: 560 LGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKR 619

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
              IY  M E GI+P++  +  L  GY  A +P +AE++L  M + GVRP       +  
Sbjct: 620 CEEIYRDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIIS 679

Query: 424 SWRAIGLAREAKRV 437
            W + G  ++A +V
Sbjct: 680 GWCSAGEMKKAMQV 693



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 79/153 (51%), Gaps = 1/153 (0%)

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           DV + + +M+     G   +   IF+ +++ G +P I  ++ L     R        S++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLI 377

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
           + ++K G+ P+ ++F  +I+    +  + +AM I+EKM E G  P   T+ TL+ GYG+ 
Sbjct: 378 SKVQKNGLRPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437

Query: 394 KQPWRAEELLQVM-EEKGVRPKKSTIQLVADSW 425
            +   +  LL++M  ++ ++P   T  ++  +W
Sbjct: 438 GKLEESSRLLEMMLRDEMLQPNDRTCNILVQAW 470



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 105/237 (44%), Gaps = 16/237 (6%)

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D+   + L  G +  G PQ+A SI  ++ + G  P+++ +TT+++           +S+ 
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLI 377

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            K+ + G+ P+   +  ++    E+    +A ++ + M+E G +P  ST   +   +  I
Sbjct: 378 SKVQKNGLRPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437

Query: 429 GLAREAKRVLKSAEEDRQSMPNKKD-EIAVESIHRKQNLS-ASNSTF-LQIPGVVSSEHN 485
           G   E+ R+L+    D    PN +   I V++   ++ +  A N  + +Q  GV      
Sbjct: 438 GKLEESSRLLEMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSFGVKPDAVT 497

Query: 486 GSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQPMVVCRKQCSQVGTCGQFVNAY 542
            ++ A+  S+I     +  TA   +      + V+P          V TCG  VN Y
Sbjct: 498 FNTLARAYSRI----GSTCTAEDMIIPRMLHNKVKP---------NVRTCGTIVNGY 541


>gi|356565780|ref|XP_003551115.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like [Glycine max]
          Length = 622

 Score =  563 bits (1451), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 266/471 (56%), Positives = 354/471 (75%), Gaps = 10/471 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MNIL+  GKP EA  IF  LIE GH+P+L TYTTL+ ALT QK FK I S++S VE+  M
Sbjct: 137 MNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQM 196

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPDS  FNA++NA +E GN+++A K+ QKMK+SG KP+  TYNTLIKGYG  GKP+ES+K
Sbjct: 197 KPDSRFFNALVNAFAEFGNIEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESIK 256

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL LMS + NVKPN +T N+L+RA C      EAWNVVYKM  SG+QPD V++NT+A +Y
Sbjct: 257 LLDLMSIEGNVKPNLKTCNMLIRALCKMEHTSEAWNVVYKMTTSGMQPDVVSFNTVAISY 316

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           AQ G+T + E M+ EM+ N ++PN+RTC II+SGYC+EG + +A+RF+YR+K+L + PNL
Sbjct: 317 AQNGKTVQVEAMILEMRRNGLKPNDRTCTIIISGYCREGKVREALRFVYRIKDLGLQPNL 376

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           ++ NSL+ GF+D  D DGV++ L LMEEF ++PDV+T+STIM+AWS AG + KC+EI+++
Sbjct: 377 IILNSLVNGFVDTMDRDGVNEVLNLMEEFYIRPDVITYSTIMNAWSQAGFLEKCKEIYNN 436

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+K+G++PD H +SILAKGYVRA E +KAE +LT M K GV PNVV+FTTV+SGWC+  +
Sbjct: 437 MLKSGVKPDGHAYSILAKGYVRAQEMEKAEELLTVMTKSGVQPNVVIFTTVMSGWCSVGR 496

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M  AM +++KM E G++PNLKT+ETL+WGY EAKQPW+AE +LQ+MEE  V+PKKSTI L
Sbjct: 497 MDNAMRVFDKMGEFGVSPNLKTFETLIWGYAEAKQPWKAEGMLQIMEEFHVQPKKSTILL 556

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNS 471
           VA++W   GL   AK +L +           K E  + SI    N++A  S
Sbjct: 557 VAEAWCFAGLKEGAKTLLITV----------KTEKMINSIDGDNNITAKMS 597



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 48/95 (50%)

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           T V++    + K Q A+ I++ + E G  P+L TY TLL      K       ++ ++EE
Sbjct: 134 TKVMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEE 193

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           K ++P       + +++   G   +AK+V++  +E
Sbjct: 194 KQMKPDSRFFNALVNAFAEFGNIEDAKKVVQKMKE 228


>gi|297808589|ref|XP_002872178.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318015|gb|EFH48437.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 279/554 (50%), Positives = 387/554 (69%), Gaps = 37/554 (6%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN+L+ +G+PHEA  +F  L E GHRP+LI+YTTL+AA+T QK++ S+ S++S+VE+ G 
Sbjct: 46  MNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSLSSIVSEVEQSGT 105

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPDSI FNA+INA SESGN+++A++   KMK+ G  PTTSTYNTLIKGYG  GKPE S  
Sbjct: 106 KPDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSA 165

Query: 121 LLQLMSQDKNV--KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           LL LM ++ NV  +PN RT+N+LV+AWC K  +EEAW VV+KM   G++PD VTYNT+A 
Sbjct: 166 LLDLMLEESNVDVRPNIRTFNVLVQAWCKKKKVEEAWEVVHKMEECGVRPDTVTYNTIAT 225

Query: 179 AYAQYGETYRAEQMLFE--MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
            Y Q GET RAE  + E  +   + +PN RTCGI+V GYC+EG + D +RF+ RMKE+ V
Sbjct: 226 CYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRV 285

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
             NLVVFNSLI GF+++ D DG+D+ LTLM+E  VK DV+T+ST+M+AWSSAG M K  +
Sbjct: 286 EANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQ 345

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F +MVKAG++PD H +SILAKGYVRA EP+KAE +L ++      PNVV+FTTVISGWC
Sbjct: 346 VFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWC 404

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
           ++  M  AM ++ KMC+ G++PN+KT+ETL+WGY E KQPW+AEE+LQ+M   GV+P+ S
Sbjct: 405 SSGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGFGVKPENS 464

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIA-VESIHRKQNLSASNSTFLQ 475
           T  L+A++WR  GL  E+ + +        ++  K  EIA +E +++KQ+ S S+   LQ
Sbjct: 465 TFLLLAEAWRVAGLTDESNKAI-------NALKCKDIEIAKLEKLYQKQS-SGSSLNLLQ 516

Query: 476 IPGVVSSEHNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQPMVVCRKQC-SQVGT 534
           IP                    +    + TA K++ ++    G +  ++C+KQ  +Q G 
Sbjct: 517 IP--------------------VGKRELPTA-KAMNLSACKLGARVPIICQKQSQAQFGI 555

Query: 535 CGQFVNAYRLVFIN 548
            GQFV++   VF+N
Sbjct: 556 SGQFVHSC-TVFLN 568



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 156/322 (48%), Gaps = 15/322 (4%)

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA---Q 182
           S  + V+   +  N+L+     +    EA  V   +  +G +P  ++Y TL  A     Q
Sbjct: 34  SSCRTVRSRTKLMNVLIE----RGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQ 89

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
           YG       ++ E++ +  +P+      +++ + + GNMEDA++ L +MKEL ++P    
Sbjct: 90  YGSL---SSIVSEVEQSGTKPDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTST 146

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +N+LIKG+      +     L LM E     V+P++ TF+ ++ AW     + +  E+  
Sbjct: 147 YNTLIKGYGIAGKPERSSALLDLMLEESNVDVRPNIRTFNVLVQAWCKKKKVEEAWEVVH 206

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS--MRKYGVHPNVVMFTTVISGWCN 357
            M + G+ PD   ++ +A  YV+ GE  +AES +    + K    PN      V+ G+C 
Sbjct: 207 KMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCR 266

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             +++  +    +M E+ +  NL  + +L+ G+ E       +E+L +M+E  V+    T
Sbjct: 267 EGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVIT 326

Query: 418 IQLVADSWRAIGLAREAKRVLK 439
              V ++W + G   +A +V K
Sbjct: 327 YSTVMNAWSSAGYMEKAAQVFK 348



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 3/168 (1%)

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           + +M+     G   + Q +F  + + G  P +  ++ L        +     SI++ + +
Sbjct: 43  TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSLSSIVSEVEQ 102

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            G  P+ + F  VI+ +  +  M+ A+    KM E+G+NP   TY TL+ GYG A +P R
Sbjct: 103 SGTKPDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 162

Query: 399 AEELLQVMEEKG---VRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           +  LL +M E+    VRP   T  ++  +W       EA  V+   EE
Sbjct: 163 SSALLDLMLEESNVDVRPNIRTFNVLVQAWCKKKKVEEAWEVVHKMEE 210


>gi|30689969|ref|NP_197945.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|357528836|sp|Q8GZ63.2|PP397_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g25630
 gi|332006092|gb|AED93475.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 574

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 276/547 (50%), Positives = 380/547 (69%), Gaps = 36/547 (6%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN+L+ +G+PHEA  +F  L E GHRP+LI+YTTL+AA+T QK++ SI S++S+VE+ G 
Sbjct: 52  MNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGT 111

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K DSI FNA+INA SESGN+++A++   KMK+ G  PTTSTYNTLIKGYG  GKPE S +
Sbjct: 112 KLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSE 171

Query: 121 LLQLMSQDKNVK--PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           LL LM ++ NV   PN RT+N+LV+AWC K  +EEAW VV KM   G++PD VTYNT+A 
Sbjct: 172 LLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIAT 231

Query: 179 AYAQYGETYRAEQMLFE--MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
            Y Q GET RAE  + E  +   + +PN RTCGI+V GYC+EG + D +RF+ RMKE+ V
Sbjct: 232 CYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRV 291

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
             NLVVFNSLI GF+++ D DG+D+ LTLM+E  VK DV+T+ST+M+AWSSAG M K  +
Sbjct: 292 EANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQ 351

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F +MVKAG++PD H +SILAKGYVRA EP+KAE +L ++      PNVV+FTTVISGWC
Sbjct: 352 VFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWC 410

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
           +   M  AM ++ KMC+ G++PN+KT+ETL+WGY E KQPW+AEE+LQ+M   GV+P+ S
Sbjct: 411 SNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENS 470

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIA-VESIHRKQNLSASNSTFLQ 475
           T  L+A++WR  GL  E+ + +        ++  K  EIA +E +++KQ+ S S+   LQ
Sbjct: 471 TFLLLAEAWRVAGLTDESNKAI-------NALKCKDIEIAKLEKLYQKQS-SGSSFNLLQ 522

Query: 476 IPGVVSSEHNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQPMVVCRKQC-SQVGT 534
           IP                    +    + TA K++ ++    G +  ++C+KQ  +Q G 
Sbjct: 523 IP--------------------VGKRELPTA-KAMNLSACKLGARVPIICQKQSQAQFGI 561

Query: 535 CGQFVNA 541
            GQFV++
Sbjct: 562 SGQFVHS 568



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 156/322 (48%), Gaps = 15/322 (4%)

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA---Q 182
           S  + V+   +  N+L+     +    EA  V   +  +G +P  ++Y TL  A     Q
Sbjct: 40  SSCRTVRSRTKLMNVLIE----RGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQ 95

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
           YG       ++ E++ +  + +      +++ + + GNMEDA++ L +MKEL ++P    
Sbjct: 96  YGSI---SSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTST 152

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFG---VKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +N+LIKG+      +   + L LM E G   V P++ TF+ ++ AW     + +  E+  
Sbjct: 153 YNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVK 212

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS--MRKYGVHPNVVMFTTVISGWCN 357
            M + G+ PD   ++ +A  YV+ GE  +AES +    + K    PN      V+ G+C 
Sbjct: 213 KMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCR 272

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             +++  +    +M E+ +  NL  + +L+ G+ E       +E+L +M+E  V+    T
Sbjct: 273 EGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVIT 332

Query: 418 IQLVADSWRAIGLAREAKRVLK 439
              V ++W + G   +A +V K
Sbjct: 333 YSTVMNAWSSAGYMEKAAQVFK 354



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 3/168 (1%)

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           + +M+     G   + Q +F  + + G  P +  ++ L        +     SI++ + +
Sbjct: 49  TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            G   + + F  VI+ +  +  M+ A+    KM E+G+NP   TY TL+ GYG A +P R
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168

Query: 399 AEELLQVMEEKG---VRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           + ELL +M E+G   V P   T  ++  +W       EA  V+K  EE
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEE 216


>gi|26449475|dbj|BAC41864.1| unknown protein [Arabidopsis thaliana]
 gi|29028966|gb|AAO64862.1| At5g25630 [Arabidopsis thaliana]
          Length = 574

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 275/547 (50%), Positives = 379/547 (69%), Gaps = 36/547 (6%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN+L+ +G+PHEA  +F  L E GHRP+LI+YTTL+AA+T QK++ SI S++S+VE+ G 
Sbjct: 52  MNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGT 111

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K DSI FNA+INA SESGN+++A++   KMK+ G  PTTSTYNTLIKGYG  GKPE S +
Sbjct: 112 KLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSE 171

Query: 121 LLQLMSQDKNVK--PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           LL LM ++ NV   PN RT+N+LV+AWC K  +EEAW VV KM   G++PD VTYNT+A 
Sbjct: 172 LLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIAT 231

Query: 179 AYAQYGETYRAEQMLFE--MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
            Y Q GET RAE  + E  +   + +PN RTCGI+V GYC+EG + D +RF+ RMKE+ V
Sbjct: 232 CYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRV 291

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
             NLVVFNSLI GF+++ D DG+D+ LTLM+E  VK DV+T+ST+M+AWSSAG M K  +
Sbjct: 292 EANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQ 351

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F +MVKAG++PD H +SILAKGYVRA  P+KAE +L ++      PNVV+FTTVISGWC
Sbjct: 352 VFKEMVKAGVKPDAHAYSILAKGYVRAKGPKKAEELLETLIVES-RPNVVIFTTVISGWC 410

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
           +   M  AM ++ KMC+ G++PN+KT+ETL+WGY E KQPW+AEE+LQ+M   GV+P+ S
Sbjct: 411 SNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENS 470

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIA-VESIHRKQNLSASNSTFLQ 475
           T  L+A++WR  GL  E+ + +        ++  K  EIA +E +++KQ+ S S+   LQ
Sbjct: 471 TFLLLAEAWRVAGLTDESNKAI-------NALKCKDIEIAKLEKLYQKQS-SGSSFNLLQ 522

Query: 476 IPGVVSSEHNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQPMVVCRKQC-SQVGT 534
           IP                    +    + TA K++ ++    G +  ++C+KQ  +Q G 
Sbjct: 523 IP--------------------VGKRELPTA-KAMNLSACKLGARVPIICQKQSQAQFGI 561

Query: 535 CGQFVNA 541
            GQFV++
Sbjct: 562 SGQFVHS 568



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 156/322 (48%), Gaps = 15/322 (4%)

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA---Q 182
           S  + V+   +  N+L+     +    EA  V   +  +G +P  ++Y TL  A     Q
Sbjct: 40  SSCRTVRSRTKLMNVLIE----RGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQ 95

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
           YG       ++ E++ +  + +      +++ + + GNMEDA++ L +MKEL ++P    
Sbjct: 96  YGSI---SSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTST 152

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFG---VKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +N+LIKG+      +   + L LM E G   V P++ TF+ ++ AW     + +  E+  
Sbjct: 153 YNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVK 212

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS--MRKYGVHPNVVMFTTVISGWCN 357
            M + G+ PD   ++ +A  YV+ GE  +AES +    + K    PN      V+ G+C 
Sbjct: 213 KMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCR 272

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             +++  +    +M E+ +  NL  + +L+ G+ E       +E+L +M+E  V+    T
Sbjct: 273 EGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVIT 332

Query: 418 IQLVADSWRAIGLAREAKRVLK 439
              V ++W + G   +A +V K
Sbjct: 333 YSTVMNAWSSAGYMEKAAQVFK 354



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 3/168 (1%)

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           + +M+     G   + Q +F  + + G  P +  ++ L        +     SI++ + +
Sbjct: 49  TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            G   + + F  VI+ +  +  M+ A+    KM E+G+NP   TY TL+ GYG A +P R
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168

Query: 399 AEELLQVMEEKG---VRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           + ELL +M E+G   V P   T  ++  +W       EA  V+K  EE
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEE 216


>gi|242049534|ref|XP_002462511.1| hypothetical protein SORBIDRAFT_02g027050 [Sorghum bicolor]
 gi|241925888|gb|EER99032.1| hypothetical protein SORBIDRAFT_02g027050 [Sorghum bicolor]
          Length = 643

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 266/561 (47%), Positives = 382/561 (68%), Gaps = 18/561 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L+   KP++AH +F  L+EEGH+P+L+TYT L+ ALT Q+ F+SI SL+++VE  G+
Sbjct: 79  MRALIDSNKPYQAHSVFKHLMEEGHKPSLVTYTILLTALTNQRMFESIPSLLAQVELAGI 138

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PDSI FNA+INA  E+  + EA+  F KMK SGC PTTST+NTLIKGYG VGKPEES +
Sbjct: 139 RPDSIFFNALINAFVEAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQR 198

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +  +M  + ++KPN  TYNILV+AWC + ++EEAW VV KM A G++PD VTYNT+A AY
Sbjct: 199 VFDMMGIEGSIKPNLTTYNILVKAWCDRRNLEEAWGVVGKMRAGGVEPDIVTYNTIASAY 258

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A   ET+RAE+++ E+Q  +VR +ERT GII+ GYC+E  +E+A+R + +MK+  + PN+
Sbjct: 259 ANNDETWRAEELIVEIQT-RVRTSERTWGIIIGGYCRESRLEEALRCVQQMKDAGIVPNV 317

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V+FN+L+KGFLD+ D   V+  L LME+FG+KPD+VT+S  ++ +SS G M KC ++FD 
Sbjct: 318 VIFNTLLKGFLDVNDMAAVNNILGLMEQFGIKPDIVTYSHQLNTFSSLGHMAKCMKVFDK 377

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M++AGIEPD  V+SILAKG+VRA +P+KAE +L  M   GV PNVV FTTVISGWC+   
Sbjct: 378 MIEAGIEPDPQVYSILAKGFVRAKQPEKAEDLLLQMSHLGVCPNVVTFTTVISGWCSVAD 437

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ AM +YEKMC+ G+ PNL+T+ETL+WGY E KQPW+AEE+LQ+M E GV+PK+ST +L
Sbjct: 438 MESAMRVYEKMCKSGVYPNLRTFETLIWGYSEQKQPWKAEEVLQMMRETGVKPKESTHRL 497

Query: 421 VADSWRAIGLAREAKRVLKSA-----------EEDRQSMPNKKDEIAVESIHRKQNLSA- 468
           +AD+W+A+GL         S             +D  ++   +D+  ++S    +  +  
Sbjct: 498 IADAWKAVGLIENINNSNGSPNGPYAIDKLDDSDDNCNVQISEDDNKLQSFDESKGRAMN 557

Query: 469 --SNSTFLQIPGVVSSEHNGSSAAKIRSQIVLRSDTVWTATKSLFVN-TYGSGVQPMVVC 525
             S S+FLQI   +     G  +AK+       S+ +     + F+  +    +  +  C
Sbjct: 558 GRSRSSFLQITNALGC--GGIVSAKVLKVGEFPSERLKAIKNTSFLQRSQRFQLLHLEFC 615

Query: 526 RKQCSQVGTCGQFVNAYRLVF 546
           RKQ    G   Q ++++++VF
Sbjct: 616 RKQLKNGGFYSQSISSFKMVF 636


>gi|414885834|tpg|DAA61848.1| TPA: leaf protein [Zea mays]
          Length = 637

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 272/564 (48%), Positives = 384/564 (68%), Gaps = 25/564 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L+   KP++AH +F  L++EGH+P+L+TYT L+ ALT Q+ F+SI SL+++VE  G+
Sbjct: 74  MRALIDSKKPYQAHSVFKHLMDEGHKPSLVTYTILLTALTNQRMFESIPSLLAEVELAGV 133

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PDSI FNA+INA  E+  + EA+  F KMK SGC PTTST+NTLIKGYG VGKPEES +
Sbjct: 134 RPDSIFFNALINAFVEAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQR 193

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +  +M  + +V+PN  TYNILV+AWC   ++EEAW VV KM A G +PD VTYNT+A AY
Sbjct: 194 VFDMMGVEGSVRPNLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAY 253

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A   ET+RAE+++ E+Q  +VR +ERT GII+ GYC+EG +E+A+R + +MK+    PN+
Sbjct: 254 ANNDETWRAEELIVEIQT-RVRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNV 312

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V+FN+L+KGFLD  D   V+K L LME+FG+KPD+VT+S  ++ +SS G M KC  +FD 
Sbjct: 313 VIFNTLLKGFLDANDMAAVNKILGLMEKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDK 372

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M++AGIEPD  V+SILAKG+VRA +P+KAE +L  M   G+ PNVV FTTVISGWC+   
Sbjct: 373 MIEAGIEPDPQVYSILAKGFVRAQQPEKAEDLLLQMSHLGLCPNVVTFTTVISGWCSVAD 432

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ AM +Y+KMC+ G+ PNL+T+ETL+WGY E KQPW+AEE+LQ+M E GV+PK+ST  L
Sbjct: 433 MESAMRVYDKMCKSGVYPNLRTFETLIWGYSEQKQPWKAEEVLQMMRETGVKPKQSTYCL 492

Query: 421 VADSWRAIGLAREAKRVLKSA------EEDRQSMPNKKDEIAVESIHRKQNLSASN---- 470
           +AD+W+A+GL         S       E+   S  N    I+ ++ ++ Q    SN    
Sbjct: 493 IADAWKAVGLTENINNSNGSPNGPYAIEKLDHSNDNCNVRISEDNNNKLQFFDESNGRAM 552

Query: 471 -----STFLQIPGVVSSEHNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQPMVV- 524
                S+FLQI   + S  +G  +AK+       S+ +    K++   ++  G Q + + 
Sbjct: 553 NGRSRSSFLQITNALGS--SGIVSAKVMKAGEFPSERL----KAIKNTSFPQGFQLLHLE 606

Query: 525 -CRKQCSQVGT-CGQFVNAYRLVF 546
            CRKQ  + G  C Q +N++++ F
Sbjct: 607 FCRKQLRKNGGFCSQSINSFKMGF 630


>gi|195613918|gb|ACG28789.1| leaf protein [Zea mays]
          Length = 637

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 271/564 (48%), Positives = 384/564 (68%), Gaps = 25/564 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L+   KP++AH +F  L++EGH+P+L+TYT L+ ALT Q+ F+SI SL+++VE  G+
Sbjct: 74  MRALIDSKKPYQAHSVFKHLMDEGHKPSLVTYTILLTALTNQRMFESIPSLLAEVELAGV 133

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PDSI FNA+INA  E+  + EA+  F KMK SGC PTTST+NTLIKGYG VGKPEES +
Sbjct: 134 RPDSIFFNALINAFVEAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQR 193

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +  +M  + +V+PN  TYNILV+AWC   ++EEAW VV KM A G +PD VTYNT+A AY
Sbjct: 194 VFDMMGVEGSVRPNLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAY 253

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A   ET+RAE+++ E+Q  +VR +ERT GII+ GYC+EG +E+A+R + +MK+    PN+
Sbjct: 254 ANNDETWRAEELIVEIQT-RVRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNV 312

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V+FN+L+KGFLD  D   V+K L LM++FG+KPD+VT+S  ++ +SS G M KC  +FD 
Sbjct: 313 VIFNTLLKGFLDANDMAAVNKILGLMKKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDK 372

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M++AGIEPD  V+SILAKG+VRA +P+KAE +L  M   G+ PNVV FTTVISGWC+   
Sbjct: 373 MIEAGIEPDPQVYSILAKGFVRAQQPEKAEDLLLQMSHLGLCPNVVTFTTVISGWCSVAD 432

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ AM +Y+KMC+ G+ PNL+T+ETL+WGY E KQPW+AEE+LQ+M E GV+PK+ST  L
Sbjct: 433 MESAMRVYDKMCKSGVYPNLRTFETLIWGYSEQKQPWKAEEVLQMMRETGVKPKQSTYCL 492

Query: 421 VADSWRAIGLAREAKRVLKSA------EEDRQSMPNKKDEIAVESIHRKQNLSASN---- 470
           +AD+W+A+GL         S       E+   S  N    I+ ++ ++ Q    SN    
Sbjct: 493 IADAWKAVGLTENINNSNGSPNGPYAIEKLDHSNDNCNVRISEDNNNKLQFFDESNGRAM 552

Query: 471 -----STFLQIPGVVSSEHNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQPMVV- 524
                S+FLQI   + S  +G  +AK+       S+ +    K++   ++  G Q + + 
Sbjct: 553 NGRSRSSFLQITNALGS--SGIVSAKVMKAGEFPSERL----KAIKNTSFPQGFQLLHLE 606

Query: 525 -CRKQCSQVGT-CGQFVNAYRLVF 546
            CRKQ  + G  C Q +N++++ F
Sbjct: 607 FCRKQLRKNGGFCSQSINSFKMGF 630


>gi|226533082|ref|NP_001141414.1| uncharacterized protein LOC100273524 [Zea mays]
 gi|194704512|gb|ACF86340.1| unknown [Zea mays]
          Length = 637

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 271/564 (48%), Positives = 383/564 (67%), Gaps = 25/564 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L+   KP++AH +F  L++EGH+P+L+TYT L+ ALT Q+ F+SI SL+++VE  G+
Sbjct: 74  MRALIDSKKPYQAHSVFKHLMDEGHKPSLVTYTILLTALTNQRMFESIPSLLAEVELAGV 133

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PDSI FNA+INA  E+  + EA+  F KMK SGC PTTST+NTLIKGYG VGKPEES +
Sbjct: 134 RPDSIFFNALINAFVEAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQR 193

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +  +M  + +V+PN  TYNILV+AWC   ++EEAW VV KM A G +PD VTYNT+A AY
Sbjct: 194 VFDMMGVEGSVRPNLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAY 253

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A   ET+RAE+++ E+Q  +VR +ERT GII+ GYC+EG +E+A+R + +MK+    PN+
Sbjct: 254 ANNDETWRAEELIVEIQT-RVRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNV 312

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V+FN+L+KGFLD  D   V+K L LME+FG+KPD+VT+S  ++ +SS G M KC  +FD 
Sbjct: 313 VIFNTLLKGFLDANDMAAVNKILGLMEKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDK 372

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M++AGIEPD  V+SILAKG+VRA +P+KAE +L  M   G+ PNVV FTTVISGWC+   
Sbjct: 373 MIEAGIEPDPQVYSILAKGFVRAQQPEKAEDLLLQMSHLGLCPNVVTFTTVISGWCSVAD 432

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ AM +Y+KMC+ G+ PNL+T+ET +WGY E KQPW+AEE+LQ+M E GV+PK+ST  L
Sbjct: 433 MESAMRVYDKMCKSGVYPNLRTFETPIWGYSEQKQPWKAEEVLQMMRETGVKPKQSTYCL 492

Query: 421 VADSWRAIGLAREAKRVLKSA------EEDRQSMPNKKDEIAVESIHRKQNLSASN---- 470
           +AD+W+A+GL         S       E+   S  N    I+ ++ ++ Q    SN    
Sbjct: 493 IADAWKAVGLTENINNSNGSPNGPYAIEKLDHSNDNCNVRISEDNNNKLQFFDESNGRAM 552

Query: 471 -----STFLQIPGVVSSEHNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQPMVV- 524
                S+FLQI   + S  +G  +AK+       S+ +    K++   ++  G Q + + 
Sbjct: 553 NGRSRSSFLQITNALGS--SGIVSAKVMKAGEFPSERL----KAIKNTSFPQGFQLLHLE 606

Query: 525 -CRKQCSQVGT-CGQFVNAYRLVF 546
            CRKQ  + G  C Q +N++++ F
Sbjct: 607 FCRKQLRKNGGFCSQSINSFKMGF 630


>gi|334187948|ref|NP_001190400.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332006093|gb|AED93476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 599

 Score =  536 bits (1380), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 276/572 (48%), Positives = 380/572 (66%), Gaps = 61/572 (10%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN+L+ +G+PHEA  +F  L E GHRP+LI+YTTL+AA+T QK++ SI S++S+VE+ G 
Sbjct: 52  MNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGT 111

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K DSI FNA+INA SESGN+++A++   KMK+ G  PTTSTYNTLIKGYG  GKPE S +
Sbjct: 112 KLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSE 171

Query: 121 LLQLMSQDKNVK--PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           LL LM ++ NV   PN RT+N+LV+AWC K  +EEAW VV KM   G++PD VTYNT+A 
Sbjct: 172 LLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIAT 231

Query: 179 AYAQYGETYRAEQMLFE--MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
            Y Q GET RAE  + E  +   + +PN RTCGI+V GYC+EG + D +RF+ RMKE+ V
Sbjct: 232 CYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRV 291

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVD-------------------------KALTLMEEFGV 271
             NLVVFNSLI GF+++ D DG+D                         + LTLM+E  V
Sbjct: 292 EANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNV 351

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           K DV+T+ST+M+AWSSAG M K  ++F +MVKAG++PD H +SILAKGYVRA EP+KAE 
Sbjct: 352 KADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEE 411

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +L ++      PNVV+FTTVISGWC+   M  AM ++ KMC+ G++PN+KT+ETL+WGY 
Sbjct: 412 LLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYL 470

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
           E KQPW+AEE+LQ+M   GV+P+ ST  L+A++WR  GL  E+ + +        ++  K
Sbjct: 471 EVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAI-------NALKCK 523

Query: 452 KDEIA-VESIHRKQNLSASNSTFLQIPGVVSSEHNGSSAAKIRSQIVLRSDTVWTATKSL 510
             EIA +E +++KQ+ S S+   LQIP                    +    + TA K++
Sbjct: 524 DIEIAKLEKLYQKQS-SGSSFNLLQIP--------------------VGKRELPTA-KAM 561

Query: 511 FVNTYGSGVQPMVVCRKQC-SQVGTCGQFVNA 541
            ++    G +  ++C+KQ  +Q G  GQFV++
Sbjct: 562 NLSACKLGARVPIICQKQSQAQFGISGQFVHS 593



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 88/380 (23%), Positives = 174/380 (45%), Gaps = 45/380 (11%)

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA---Q 182
           S  + V+   +  N+L+     +    EA  V   +  +G +P  ++Y TL  A     Q
Sbjct: 40  SSCRTVRSRTKLMNVLIE----RGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQ 95

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
           YG       ++ E++ +  + +      +++ + + GNMEDA++ L +MKEL ++P    
Sbjct: 96  YGSI---SSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTST 152

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFG---VKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +N+LIKG+      +   + L LM E G   V P++ TF+ ++ AW     + +  E+  
Sbjct: 153 YNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVK 212

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS--MRKYGVHPNVVMFTTVISGWCN 357
            M + G+ PD   ++ +A  YV+ GE  +AES +    + K    PN      V+ G+C 
Sbjct: 213 KMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCR 272

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             +++  +    +M E+ +  NL  + +L+ G+            ++VM+  G+     T
Sbjct: 273 EGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF------------VEVMDRDGIDEVTLT 320

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIP 477
           +                  +L S  E+ + + N+K ++ V ++ ++ N+ A   T+  + 
Sbjct: 321 L------------------LLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVM 362

Query: 478 GVVSSEHNGSSAAKIRSQIV 497
              SS      AA++  ++V
Sbjct: 363 NAWSSAGYMEKAAQVFKEMV 382


>gi|357436523|ref|XP_003588537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477585|gb|AES58788.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 653

 Score =  523 bits (1347), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 277/578 (47%), Positives = 386/578 (66%), Gaps = 35/578 (6%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +NIL+  GKP  A+ IF  LIEEGH+P+LITYT+L+ ALT QK FKSI SL+S+VE+  M
Sbjct: 81  LNILIVCGKPQAANVIFKKLIEEGHQPSLITYTSLLHALTMQKCFKSIHSLVSQVEEKQM 140

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K +SI +NA+INA +ESGN+++A K  QKMK+SG +P+T TY+ LIKGYG VGK  E++K
Sbjct: 141 KTNSIFYNAVINAFAESGNMEDAKKTVQKMKESGFRPSTGTYSNLIKGYGIVGKSGEAMK 200

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL LM  D N KP+ +TYN+L++A C   ++ EAWN+V KM ASG+ PD+VT+NT+A  Y
Sbjct: 201 LLDLMLTDGNSKPDLQTYNMLIKALCQSGNMSEAWNIVCKMPASGMLPDSVTFNTMAIGY 260

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
               ET  AE M+ EMQ   + PNERT  +IV+GY KEG +++A++F+YR+K+L   PNL
Sbjct: 261 VLNSETAEAEAMILEMQRKGLEPNERTFTVIVNGYYKEGQIKEALQFVYRIKDLGFKPNL 320

Query: 241 VVFNSLIKGFLDIKDSDGVDK-----------------ALTLMEEFGVKPDVVTFSTIMD 283
           +VFN LI GF+D  D DGVD+                  L LM+EF ++PDVVT+STIM+
Sbjct: 321 LVFNVLINGFVDRMDRDGVDEFSNTFAQEGKNQVTTPLVLRLMKEFQIQPDVVTYSTIMN 380

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
           AWS AG   KC++IFD+M+++G++PD+H +SIL KGYVR+ E +KAE +L  M + GV P
Sbjct: 381 AWSQAGFQDKCKQIFDNMLQSGVKPDVHAYSILVKGYVRSMETEKAEELLGDMIESGVRP 440

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           NVV FT VISGW ++ +M  A+ I++KMCE+G++PNL+T+E L+WGY +A QPW++EE+L
Sbjct: 441 NVVTFTNVISGWGSSGRMDNAIKIFDKMCELGVSPNLRTFEALIWGYAKADQPWKSEEIL 500

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDE-----IAVE 458
           Q+MEE  V PKKST  LV+ +WR  GL  EA R L+S    +Q + N  DE        E
Sbjct: 501 QLMEEFHVHPKKSTFLLVSKAWRFAGLTEEAIR-LRSISRAKQRI-NSIDEDGNVATTSE 558

Query: 459 SIHRKQNLSASNSTFLQIPGVVSSEHNGSSA--AKIRSQIVLRSDTVWTATKSLF----- 511
            I++K +++  +S    +P  V S     +A  A+  S++   +D V T   + F     
Sbjct: 559 RIYQKPHIAPLSSLLQCLPSSVGSTDKKGTALGARRNSRLPRDADLVTTLISTKFKCHSR 618

Query: 512 VNTYGSGVQPMVVCRKQC-SQVGTCGQFVNAYRLVFIN 548
              +  G    V+C K+   Q GT  Q  N+   VF+N
Sbjct: 619 TCRFVEGFS--VMCHKRFQGQRGTY-QLTNSCTPVFLN 653


>gi|115435438|ref|NP_001042477.1| Os01g0228400 [Oryza sativa Japonica Group]
 gi|17385740|dbj|BAB78680.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|113532008|dbj|BAF04391.1| Os01g0228400 [Oryza sativa Japonica Group]
 gi|215740499|dbj|BAG97155.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 636

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 262/565 (46%), Positives = 370/565 (65%), Gaps = 31/565 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  ++   +PH+AH  F  L+++GHRP+L+TYTTL+AALT Q+ F +I  L+++VE  G+
Sbjct: 86  MRAMIDARRPHQAHSAFRHLVDDGHRPSLVTYTTLLAALTSQRAFDTIPWLLAEVEDAGL 145

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PDSI FNA+INA  E+  + EA   F +M  SGC+PT ST+NTLIKGYG  G+PEES +
Sbjct: 146 RPDSIFFNALINALVEARRMGEATNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQR 205

Query: 121 LLQLMSQDKN-----VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
           +  +M+         V+PN  TYNILV+AWC    +EEAW VV +M ASG  PD VTYNT
Sbjct: 206 VFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNT 265

Query: 176 LARAYAQYGETYRAEQMLFEM-QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           LA AYA+  ET+RAE+++ EM Q   +R +ERT GIIV GYC+EG + +A+R + +MK+ 
Sbjct: 266 LASAYAKNDETWRAEELVVEMAQQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDS 325

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            V PN++VFN+L+KGFLD  D   VD  L LME+FG+KPD+VT+S  ++A SS G M KC
Sbjct: 326 GVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKC 385

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
            ++FD M++AGIEPD  V+SILAKGYVRA +P+KAE +L  M + GV PNVV FTTVISG
Sbjct: 386 MKVFDKMIEAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISG 445

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
           WC+   M  A+ +Y  M + G+ PNL+T+ETL+WGY E KQPW+AEE+LQ+M++ GVRPK
Sbjct: 446 WCSVADMGNAVRVYAAMRDAGVRPNLRTFETLIWGYSELKQPWKAEEVLQMMQDAGVRPK 505

Query: 415 KSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS----------MPNKKDEIAVESIHRKQ 464
           ++T  LVAD+W+A+GL   A R L S+                 P+   +  ++S  R  
Sbjct: 506 QTTYCLVADAWKAVGLVENANRALGSSSSSGDLLDADDDEEPYFPDNHGDDKLQSFERTN 565

Query: 465 NLSASNSTFLQIPGVVSSEHNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQPMVV 524
             + S+++               S    R+ + L++    + + SL   +    V+   +
Sbjct: 566 GHAKSDAS--------------RSMQVTRASMSLKTARSSSPSLSLLRRSCRLPVRSTWL 611

Query: 525 CRKQCS-QVGTCGQFVNAYRLVFIN 548
           CRKQ   Q G  GQ +++ ++VF++
Sbjct: 612 CRKQLQMQCGVYGQSISSLKMVFLS 636


>gi|125525011|gb|EAY73125.1| hypothetical protein OsI_00999 [Oryza sativa Indica Group]
          Length = 634

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 240/442 (54%), Positives = 323/442 (73%), Gaps = 6/442 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  ++   +PH+AH  F  L+++GHRP+L+TYTTL+AALT Q+ F +I  L+++VE  G+
Sbjct: 86  MRAMIDARRPHQAHSAFRHLVDDGHRPSLVTYTTLLAALTSQRAFDTIPWLLAEVEDAGL 145

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PDSI FNA+INA  E+  + EA   F +M  SGC+PT ST+NTLIKGYG  G+PEES +
Sbjct: 146 RPDSIFFNALINALVEARRMGEATNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQR 205

Query: 121 LLQLMSQDKN-----VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
           +  +M+         V+PN  TYNILV+AWC    +EEAW VV +M ASG  PD VTYNT
Sbjct: 206 VFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNT 265

Query: 176 LARAYAQYGETYRAEQMLFEM-QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           LA AYA+  ET+RAE+++ EM Q   +R +ERT GIIV GYC+EG + +A+R + +MK+ 
Sbjct: 266 LASAYAKNDETWRAEELVVEMAQQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDS 325

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            V PN++VFN+L+KGFLD  D   VD  L LME+FG+KPD+VT+S  ++A SS G M KC
Sbjct: 326 GVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKC 385

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
            ++FD M++AGIEPD  V+SILAKGYVRA +P+KAE +L  M + GV PNVV FTTVISG
Sbjct: 386 MKVFDKMIEAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISG 445

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
           WC+   M  A+ +Y  M + G+ PNL+T+ETL+WGY E KQPW+AEE+LQ+M++ GVRPK
Sbjct: 446 WCSVADMGNAVRVYAAMRDAGVRPNLRTFETLIWGYSELKQPWKAEEVLQMMQDAGVRPK 505

Query: 415 KSTIQLVADSWRAIGLAREAKR 436
           ++T  LVAD+W+A+GL   A R
Sbjct: 506 QTTYCLVADAWKAVGLVENANR 527


>gi|326492636|dbj|BAJ90174.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 631

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 240/466 (51%), Positives = 333/466 (71%), Gaps = 12/466 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L+   KPH+A  +F  L +EGHRP+L+TYTTL+ A+T Q+ F++I SL++ ++  G+
Sbjct: 71  MRGLIDAKKPHQAQDLFGHLADEGHRPSLVTYTTLLTAVTNQRAFEAIPSLLAGMDAAGL 130

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMK--DSGCKPTTSTYNTLIKGYGNVGKPEES 118
           +PD+I FNA+IN+  E+G + EA   F KM     GC+PT ST+NTLIKG+G  G+P+ES
Sbjct: 131 RPDAIFFNALINSFVEAGRMGEATSTFWKMSRHHPGCRPTISTFNTLIKGFGIAGRPDES 190

Query: 119 LKLLQLMSQD----------KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP 168
            ++  +M+              V+PN  TYNILV+AWC    +EEAW VV +M A G++P
Sbjct: 191 QRIFDMMAGGDGDGDRDRVASTVRPNLTTYNILVKAWCDHRRLEEAWGVVGRMRARGVEP 250

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           D VTYNT+A AYA+  ET+RAE+++ EM   ++R +ERT GIIV GYC+EG +E+A+R +
Sbjct: 251 DVVTYNTVASAYAKNDETWRAEELVVEMVRARLRTSERTWGIIVGGYCREGRLEEALRCV 310

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
            +MK+  V PN++VFN+L+KGFLD  D+   D  L LME FG+KPD+VT+S  ++A+SS 
Sbjct: 311 RQMKDAGVLPNVIVFNTLLKGFLDANDTAAADDVLGLMEHFGIKPDIVTYSHQLNAFSSL 370

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
           G M KC ++FD MV+AGIEPD  V+SILAKG+VRA +P KAE +L  M + GV PNVV F
Sbjct: 371 GHMAKCSKVFDKMVEAGIEPDPQVYSILAKGHVRAQQPGKAEELLERMCRLGVRPNVVTF 430

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           TTVISGWC+   M  A  +Y KM + G+ PNL+T+ETL+WGY E KQPW+AEE+LQ+M+E
Sbjct: 431 TTVISGWCSVADMDNATRVYRKMRDAGVRPNLRTFETLIWGYSEQKQPWKAEEVLQMMQE 490

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDE 454
            G+RPK+ST  LVAD+W+A+GL + A R + S ++ R+   N  DE
Sbjct: 491 AGIRPKQSTYSLVADAWKAVGLVKNANRTVGSPDDRRRPNANDHDE 536


>gi|357127701|ref|XP_003565517.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like [Brachypodium distachyon]
          Length = 579

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 251/505 (49%), Positives = 349/505 (69%), Gaps = 17/505 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L+ + KPH+AH +F  L  EGHRP+L+TYTTL++ LT Q+ F+ I +L++ +E  G+
Sbjct: 33  MRALIDEKKPHQAHAVFAQLAGEGHRPSLVTYTTLLSLLTSQRAFERIPALLADIEAAGL 92

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMK--DSGCKPTTSTYNTLIKGYGNVGKPEES 118
           +PD I FNA+INA  E+G + EA  +F KM     GC+PT ST+NTLIKG+G  G+PEES
Sbjct: 93  RPDPIFFNALINAFVEAGRMGEATSVFWKMSRHHPGCRPTVSTFNTLIKGFGIAGRPEES 152

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
            ++  LM+    V+PN  TYNILV+AWC +  +E+AW VV +M  + ++PD VTYNTLA 
Sbjct: 153 QRIFDLMT--AWVRPNLTTYNILVKAWCDQRRMEQAWAVVGRMRPAAVEPDVVTYNTLAS 210

Query: 179 AYAQYGETYRAEQMLF-EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
           AYA+  ET+RAE+++  EM   ++R +ERT GIIV GYC+EG +E+A+R + +MK+  V 
Sbjct: 211 AYAKNDETWRAEELVVVEMARARLRTSERTWGIIVGGYCREGRLEEALRCVRQMKDAGVG 270

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           PN++VFN+L+KGFLD  D+      L LME+FG+KPD+VT+S  ++A SS G M +C ++
Sbjct: 271 PNVIVFNTLLKGFLDANDAAAAADVLGLMEQFGIKPDIVTYSHQLNALSSLGHMARCAKV 330

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           FD M++AGIEPD  V+SILAKGYVRA +P KAE +L  M + GV PNVV FTTVISGWC+
Sbjct: 331 FDRMLEAGIEPDPQVYSILAKGYVRAQQPGKAEELLQQMGRLGVRPNVVTFTTVISGWCS 390

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              M  A  +Y+KM   G+ PNL+T+ETL+WGY E KQPW+AE++LQ+M++ GVRPK+ST
Sbjct: 391 VADMDNATRVYDKMRGAGVRPNLRTFETLIWGYSEQKQPWKAEKVLQMMKDAGVRPKQST 450

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVES---IHRKQNLS------- 467
             LVAD+W+A+G+   A R L S ++ R+   +  DE    S   I R Q          
Sbjct: 451 YSLVADAWKAVGIVENANRALGSPDDCRRRNVSDHDEPGRHSDDEIDRLQRFGRTDEQAK 510

Query: 468 --ASNSTFLQIPGVVSSEHNGSSAA 490
              SNS+FLQ+   + +   G SA+
Sbjct: 511 SDPSNSSFLQVTSALGTGKTGKSAS 535


>gi|222618027|gb|EEE54159.1| hypothetical protein OsJ_00969 [Oryza sativa Japonica Group]
          Length = 610

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 253/565 (44%), Positives = 355/565 (62%), Gaps = 57/565 (10%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  ++   +PH+AH  F  L+++GHRP+L+TYTTL+AALT Q+ F +I  L+++VE  G+
Sbjct: 86  MRAMIDARRPHQAHSAFRHLVDDGHRPSLVTYTTLLAALTSQRAFDTIPWLLAEVEDAGL 145

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PDSI FNA+INA  E+  + EA   F +M  SGC+PT ST+NTLIKGYG  G+PEES +
Sbjct: 146 RPDSIFFNALINALVEARRMGEATNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQR 205

Query: 121 LLQLMSQDKN-----VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
           +  +M+         V+PN  TYNILV+AWC    +EEAW VV +M ASG  PD VTYNT
Sbjct: 206 VFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNT 265

Query: 176 LARAYAQYGETYRAEQMLFEM-QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           LA AYA+  ET+RAE+++ EM Q   +R +ERT GIIV GYC+EG + +A+R + +MK+ 
Sbjct: 266 LASAYAKNDETWRAEELVVEMAQQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDS 325

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            V PN++VFN+L+KGFLD  D   VD  L LME+FG+KPD+VT+S  ++A SS G M KC
Sbjct: 326 GVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKC 385

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
            ++FD M++AGIEPD  V+SILAKGYVRA +P+KAE +L  M + GV PNVV FTTVISG
Sbjct: 386 MKVFDKMIEAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISG 445

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
           W                          T+ETL+WGY E KQPW+AEE+LQ+M++ GVRPK
Sbjct: 446 W--------------------------TFETLIWGYSELKQPWKAEEVLQMMQDAGVRPK 479

Query: 415 KSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS----------MPNKKDEIAVESIHRKQ 464
           ++T  LVAD+W+A+GL   A R L S+                 P+   +  ++S  R  
Sbjct: 480 QTTYCLVADAWKAVGLVENANRALGSSSSSGDLLDADDDEEPYFPDNHGDDKLQSFERTN 539

Query: 465 NLSASNSTFLQIPGVVSSEHNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQPMVV 524
             + S+++               S    R+ + L++    + + SL   +    V+   +
Sbjct: 540 GHAKSDAS--------------RSMQVTRASMSLKTARSSSPSLSLLRRSCRLPVRSTWL 585

Query: 525 CRKQCS-QVGTCGQFVNAYRLVFIN 548
           CRKQ   Q G  GQ +++ ++VF++
Sbjct: 586 CRKQLQMQCGVYGQSISSLKMVFLS 610


>gi|255551050|ref|XP_002516573.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544393|gb|EEF45914.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 396

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 222/398 (55%), Positives = 294/398 (73%), Gaps = 12/398 (3%)

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           MV SG QPD VTYNT+A AY +  ET  AE+M+ EMQN  V+PNERTCG ++SGYCKEG 
Sbjct: 1   MVVSGRQPDVVTYNTIATAYVRNEETNLAEEMISEMQNTGVQPNERTCGTVISGYCKEGR 60

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           +++A+RF++RMKEL VHPNLVVFNSLIKGF+DI D +GVD+ L LMEEF VKPDV+TFST
Sbjct: 61  IKEALRFVHRMKELGVHPNLVVFNSLIKGFVDIMDRNGVDEVLKLMEEFNVKPDVITFST 120

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           IM+AWS AG M KC+EIFDDM+KAGI+PD H +SILAKGYVRA EP+KAE +LT+M + G
Sbjct: 121 IMNAWSKAGYMNKCREIFDDMMKAGIQPDGHAYSILAKGYVRAQEPEKAEQLLTTMMESG 180

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
            HPNVV+FTTVISGWC+  +M  A+ +++KMCE GI+PNLKT+ETL+ G+ EAKQPW+AE
Sbjct: 181 FHPNVVIFTTVISGWCSTDRMDCAIRVFDKMCEYGISPNLKTFETLIGGFSEAKQPWKAE 240

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVES- 459
           ++LQ+M E  V PKKST+ LVA++W +IGL +E  R+L +   +R    + ++++ VES 
Sbjct: 241 DILQIMREYNVEPKKSTMLLVAEAWGSIGLTKEVNRILNTI--NRNKKDSAEEDVPVESL 298

Query: 460 --IHRKQNLSASNSTFLQIPGVVSSEHNGSSAAKIRSQIVLRS-----DTVWTATKSLFV 512
             +++K+N S S S +LQIP  V +E  GS+A   + ++VLR      +  W ATKSL +
Sbjct: 299 EKLYQKENTSFSYSNYLQIPNTVINEQKGSTACLKKGRMVLRDTDFSMEYSWLATKSLCL 358

Query: 513 -NTYGSGVQPMVVCRKQC-SQVGTCGQFVNAYRLVFIN 548
            +T   G +  ++C KQ   Q G  G    +   VF+N
Sbjct: 359 SHTCKLGARLPIICYKQFQGQHGIYGPLAQSCTAVFLN 396



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 154/299 (51%), Gaps = 4/299 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G +P ++TY T+  A  R +       +IS+++  G++P+      +I+   + G 
Sbjct: 1   MVVSGRQPDVVTYNTIATAYVRNEETNLAEEMISEMQNTGVQPNERTCGTVISGYCKEGR 60

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           + EA++   +MK+ G  P    +N+LIKG+ ++       ++L+LM ++ NVKP+  T++
Sbjct: 61  IKEALRFVHRMKELGVHPNLVVFNSLIKGFVDIMDRNGVDEVLKLM-EEFNVKPDVITFS 119

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++ AW     + +   +   M+ +GIQPD   Y+ LA+ Y +  E  +AEQ+L  M  +
Sbjct: 120 TIMNAWSKAGYMNKCREIFDDMMKAGIQPDGHAYSILAKGYVRAQEPEKAEQLLTTMMES 179

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              PN      ++SG+C    M+ A+R   +M E  + PNL  F +LI GF + K     
Sbjct: 180 GFHPNVVIFTTVISGWCSTDRMDCAIRVFDKMCEYGISPNLKTFETLIGGFSEAKQPWKA 239

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM---VKAGIEPDIHVFSI 315
           +  L +M E+ V+P   T   + +AW S GL  +   I + +    K   E D+ V S+
Sbjct: 240 EDILQIMREYNVEPKKSTMLLVAEAWGSIGLTKEVNRILNTINRNKKDSAEEDVPVESL 298



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 5/265 (1%)

Query: 93  SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS--QDKNVKPNDRTYNILVRAWCSKNS 150
           SG +P   TYNT+   Y    + EE+    +++S  Q+  V+PN+RT   ++  +C +  
Sbjct: 4   SGRQPDVVTYNTIATAYV---RNEETNLAEEMISEMQNTGVQPNERTCGTVISGYCKEGR 60

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           I+EA   V++M   G+ P+ V +N+L + +    +    +++L  M+   V+P+  T   
Sbjct: 61  IKEALRFVHRMKELGVHPNLVVFNSLIKGFVDIMDRNGVDEVLKLMEEFNVKPDVITFST 120

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           I++ + K G M         M +  + P+   ++ L KG++  ++ +  ++ LT M E G
Sbjct: 121 IMNAWSKAGYMNKCREIFDDMMKAGIQPDGHAYSILAKGYVRAQEPEKAEQLLTTMMESG 180

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
             P+VV F+T++  W S   M     +FD M + GI P++  F  L  G+  A +P KAE
Sbjct: 181 FHPNVVIFTTVISGWCSTDRMDCAIRVFDKMCEYGISPNLKTFETLIGGFSEAKQPWKAE 240

Query: 331 SILTSMRKYGVHPNVVMFTTVISGW 355
            IL  MR+Y V P       V   W
Sbjct: 241 DILQIMREYNVEPKKSTMLLVAEAW 265



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 143/283 (50%), Gaps = 7/283 (2%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G +PD + +N +  A   +   + A ++  +M+++G +P   T  T+I GY   G+ +E+
Sbjct: 5   GRQPDVVTYNTIATAYVRNEETNLAEEMISEMQNTGVQPNERTCGTVISGYCKEGRIKEA 64

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCS---KNSIEEAWNVVYKMVASGIQPDAVTYNT 175
           L+ +  M ++  V PN   +N L++ +     +N ++E   V+  M    ++PD +T++T
Sbjct: 65  LRFVHRM-KELGVHPNLVVFNSLIKGFVDIMDRNGVDE---VLKLMEEFNVKPDVITFST 120

Query: 176 LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
           +  A+++ G   +  ++  +M    ++P+     I+  GY +    E A + L  M E  
Sbjct: 121 IMNAWSKAGYMNKCREIFDDMMKAGIQPDGHAYSILAKGYVRAQEPEKAEQLLTTMMESG 180

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
            HPN+V+F ++I G+      D   +    M E+G+ P++ TF T++  +S A    K +
Sbjct: 181 FHPNVVIFTTVISGWCSTDRMDCAIRVFDKMCEYGISPNLKTFETLIGGFSEAKQPWKAE 240

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           +I   M +  +EP      ++A+ +   G  ++   IL ++ +
Sbjct: 241 DILQIMREYNVEPKKSTMLLVAEAWGSIGLTKEVNRILNTINR 283



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 111/222 (50%), Gaps = 1/222 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  EA    + + E G  P L+ + +L+           +  ++  +E+  +KPD I 
Sbjct: 58  EGRIKEALRFVHRMKELGVHPNLVVFNSLIKGFVDIMDRNGVDEVLKLMEEFNVKPDVIT 117

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F+ ++NA S++G +++  +IF  M  +G +P    Y+ L KGY    +PE++ +LL  M 
Sbjct: 118 FSTIMNAWSKAGYMNKCREIFDDMMKAGIQPDGHAYSILAKGYVRAQEPEKAEQLLTTM- 176

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +    PN   +  ++  WCS + ++ A  V  KM   GI P+  T+ TL   +++  + 
Sbjct: 177 MESGFHPNVVIFTTVISGWCSTDRMDCAIRVFDKMCEYGISPNLKTFETLIGGFSEAKQP 236

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           ++AE +L  M+   V P + T  ++   +   G  ++  R L
Sbjct: 237 WKAEDILQIMREYNVEPKKSTMLLVAEAWGSIGLTKEVNRIL 278



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 1/147 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN     G  ++   IF+ +++ G +P    Y+ L     R +  +    L++ + + G 
Sbjct: 122 MNAWSKAGYMNKCREIFDDMMKAGIQPDGHAYSILAKGYVRAQEPEKAEQLLTTMMESGF 181

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ ++F  +I+    +  +D A+++F KM + G  P   T+ TLI G+    +P ++  
Sbjct: 182 HPNVVIFTTVISGWCSTDRMDCAIRVFDKMCEYGISPNLKTFETLIGGFSEAKQPWKAED 241

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCS 147
           +LQ+M ++ NV+P   T  ++  AW S
Sbjct: 242 ILQIM-REYNVEPKKSTMLLVAEAWGS 267



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 62/121 (51%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +P +A  +   ++E G  P ++ +TT+++      R    + +  K+ + G+ P+   F 
Sbjct: 165 EPEKAEQLLTTMMESGFHPNVVIFTTVISGWCSTDRMDCAIRVFDKMCEYGISPNLKTFE 224

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I   SE+    +A  I Q M++   +P  ST   + + +G++G  +E  ++L  ++++
Sbjct: 225 TLIGGFSEAKQPWKAEDILQIMREYNVEPKKSTMLLVAEAWGSIGLTKEVNRILNTINRN 284

Query: 129 K 129
           K
Sbjct: 285 K 285


>gi|168063537|ref|XP_001783727.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664733|gb|EDQ51441.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 445

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 188/434 (43%), Positives = 282/434 (64%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           + +G   +       L  +GHRP   TYT L+++L    R      L+ ++E+D + PD+
Sbjct: 1   MSRGDHRQVRSTLKNLRRDGHRPAKETYTLLLSSLISDGRLGEGPLLLQQMEEDNVIPDA 60

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           I FN ++N   E+G + EA  +  +MK+ GC   TS+YNTLIKGYG  G+PEE++KLLQ 
Sbjct: 61  IFFNTLLNGYCEAGKMKEAEALVLEMKERGCPLITSSYNTLIKGYGLDGQPEEAMKLLQE 120

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M++D N KPNDRT+N+L++AW    + E+A NV+  M A+G+ PD V+YNTLA+ +A+ G
Sbjct: 121 MAKDVNSKPNDRTFNMLIKAWAHDKNPEKARNVISMMRAAGVGPDVVSYNTLAQLFAKLG 180

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           + + AE ++ EMQN  +RPNERT GI+++GY   G +++++R + RMK   + P + VFN
Sbjct: 181 KPWDAENVITEMQNVYLRPNERTYGIVINGYIAAGQIDESLRLIERMKMDGISPTIAVFN 240

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            L+KG+ +      VDK   LME FGVKPDV TF  IM+AW S GL+ + + +   M + 
Sbjct: 241 HLVKGYSESMKPHKVDKVFKLMENFGVKPDVQTFGLIMNAWCSTGLIDEAKAVLLRMKEY 300

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
            ++PD+  +SIL KGY R G P++ E+ L  M    + PNV+ +TTVISG+C+  +M  A
Sbjct: 301 DLQPDVMAYSILVKGYSRQGRPEEGEAFLNIMIDENLKPNVITYTTVISGYCSLAQMDDA 360

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           M ++++M    + PN++T+ TL+WG+ EA+ P RAEE+L+ + + G  P    I+LVAD 
Sbjct: 361 MRVFQEMRSRSVFPNMQTFRTLIWGFKEARWPRRAEEILEYIRKAGFTPDLECIELVADC 420

Query: 425 WRAIGLAREAKRVL 438
           WR+IG   EA RVL
Sbjct: 421 WRSIGADGEADRVL 434



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 181/374 (48%), Gaps = 3/374 (0%)

Query: 78  GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT 137
           G+  +     + ++  G +P   TY  L+    + G+  E   LLQ M +D NV P+   
Sbjct: 4   GDHRQVRSTLKNLRRDGHRPAKETYTLLLSSLISDGRLGEGPLLLQQMEED-NVIPDAIF 62

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           +N L+  +C    ++EA  +V +M   G      +YNTL + Y   G+   A ++L EM 
Sbjct: 63  FNTLLNGYCEAGKMKEAEALVLEMKERGCPLITSSYNTLIKGYGLDGQPEEAMKLLQEMA 122

Query: 198 NN-QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
            +   +PN+RT  +++  +  + N E A   +  M+   V P++V +N+L + F  +   
Sbjct: 123 KDVNSKPNDRTFNMLIKAWAHDKNPEKARNVISMMRAAGVGPDVVSYNTLAQLFAKLGKP 182

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
              +  +T M+   ++P+  T+  +++ + +AG + +   + + M   GI P I VF+ L
Sbjct: 183 WDAENVITEMQNVYLRPNERTYGIVINGYIAAGQIDESLRLIERMKMDGISPTIAVFNHL 242

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
            KGY  + +P K + +   M  +GV P+V  F  +++ WC+   +  A ++  +M E  +
Sbjct: 243 VKGYSESMKPHKVDKVFKLMENFGVKPDVQTFGLIMNAWCSTGLIDEAKAVLLRMKEYDL 302

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            P++  Y  L+ GY    +P   E  L +M ++ ++P   T   V   + ++    +A R
Sbjct: 303 QPDVMAYSILVKGYSRQGRPEEGEAFLNIMIDENLKPNVITYTTVISGYCSLAQMDDAMR 362

Query: 437 VLKSAEEDRQSMPN 450
           V +     R   PN
Sbjct: 363 VFQEMRS-RSVFPN 375



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 98/193 (50%), Gaps = 1/193 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N  +  G+  E+  +   +  +G  PT+  +  LV   +   +   +  +   +E  G+
Sbjct: 208 INGYIAAGQIDESLRLIERMKMDGISPTIAVFNHLVKGYSESMKPHKVDKVFKLMENFGV 267

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD   F  ++NA   +G +DEA  +  +MK+   +P    Y+ L+KGY   G+PEE   
Sbjct: 268 KPDVQTFGLIMNAWCSTGLIDEAKAVLLRMKEYDLQPDVMAYSILVKGYSRQGRPEEGEA 327

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L +M  D+N+KPN  TY  ++  +CS   +++A  V  +M +  + P+  T+ TL   +
Sbjct: 328 FLNIMI-DENLKPNVITYTTVISGYCSLAQMDDAMRVFQEMRSRSVFPNMQTFRTLIWGF 386

Query: 181 AQYGETYRAEQML 193
            +     RAE++L
Sbjct: 387 KEARWPRRAEEIL 399



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 1/158 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN     G   EA  +   + E   +P ++ Y+ LV   +RQ R +   + ++ +  + +
Sbjct: 278 MNAWCSTGLIDEAKAVLLRMKEYDLQPDVMAYSILVKGYSRQGRPEEGEAFLNIMIDENL 337

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP+ I +  +I+       +D+AM++FQ+M+     P   T+ TLI G+     P  + +
Sbjct: 338 KPNVITYTTVISGYCSLAQMDDAMRVFQEMRSRSVFPNMQTFRTLIWGFKEARWPRRAEE 397

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVV 158
           +L+ + +     P+     ++   W S  +  EA  V+
Sbjct: 398 ILEYIRK-AGFTPDLECIELVADCWRSIGADGEADRVL 434



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 63/129 (48%)

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+ ++  S L ++R+ G  P    +T ++S   +  ++     + ++M E  + P+   +
Sbjct: 4   GDHRQVRSTLKNLRRDGHRPAKETYTLLLSSLISDGRLGEGPLLLQQMEEDNVIPDAIFF 63

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            TLL GY EA +   AE L+  M+E+G     S+   +   +   G   EA ++L+   +
Sbjct: 64  NTLLNGYCEAGKMKEAEALVLEMKERGCPLITSSYNTLIKGYGLDGQPEEAMKLLQEMAK 123

Query: 444 DRQSMPNKK 452
           D  S PN +
Sbjct: 124 DVNSKPNDR 132


>gi|388500892|gb|AFK38512.1| unknown [Medicago truncatula]
          Length = 249

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 175/248 (70%), Positives = 215/248 (86%), Gaps = 6/248 (2%)

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           +KLL++  QD NVKPN+RTYNIL++AWC+KN +EEAWNV++KMV SG+QPD VTYNTLAR
Sbjct: 1   MKLLEMTIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLAR 60

Query: 179 AYAQYGETYRAEQMLFEMQ--NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
           A+AQ GET  AE+++ +MQ  NN+V+PNERTCGII+ GYCKEGNM +A+RFLY+MKEL V
Sbjct: 61  AFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGV 120

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           HPN VVFNSLIKG+LDI D+DGV++ALTLMEEFG+KPDVVT+STIM+AWSS+GLM  C+E
Sbjct: 121 HPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEE 180

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG-- 354
           IFDDMVKA IEPDI  +SILAKGYVRAG+P KAE++L SM KYG+  NVV+FTT+ISG  
Sbjct: 181 IFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGVV 240

Query: 355 --WCNAVK 360
             W N ++
Sbjct: 241 CRWQNGLR 248



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 128/236 (54%), Gaps = 2/236 (0%)

Query: 49  LSLISKVEKDG-MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIK 107
           + L+    +DG +KP+   +N +I A      ++EA  +  KM +SG +P   TYNTL +
Sbjct: 1   MKLLEMTIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLAR 60

Query: 108 GYGNVGKPEESLKLLQLMSQDKN-VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGI 166
            +   G+ + + +L+  M Q  N VKPN+RT  I++R +C + ++ EA   +YKM   G+
Sbjct: 61  AFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGV 120

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR 226
            P+ V +N+L + Y    +T   E+ L  M+   ++P+  T   I++ +   G M++   
Sbjct: 121 HPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEE 180

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIM 282
               M + E+ P++  ++ L KG++     D  +  L  M ++G++ +VV F+TI+
Sbjct: 181 IFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTII 236



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 122/224 (54%), Gaps = 4/224 (1%)

Query: 193 LFEM--QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           L EM  Q+  V+PNERT  I++  +C +  +E+A   +++M    + P++V +N+L + F
Sbjct: 3   LLEMTIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAF 62

Query: 251 LDIKDSDGVDKALTLMEEFG--VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
               ++D  ++ +  M+++   VKP+  T   I+  +   G M +       M + G+ P
Sbjct: 63  AQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHP 122

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           +  VF+ L KGY+   +    E  LT M ++G+ P+VV ++T+++ W ++  M     I+
Sbjct: 123 NPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIF 182

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
           + M +  I P+++ Y  L  GY  A QP +AE LL  M + G++
Sbjct: 183 DDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQ 226



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 122/237 (51%), Gaps = 10/237 (4%)

Query: 21  IEEGH-RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           I++G+ +P   TY  L+ A   +   +   +++ K+   GM+PD + +N +  A +++G 
Sbjct: 8   IQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGE 67

Query: 80  VDEAMKIFQKMK--DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT 137
            D A ++  KM+  ++  KP   T   +I+GY   G   E+L+ L  M ++  V PN   
Sbjct: 68  TDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKM-KELGVHPNPVV 126

Query: 138 YNILVRAW---CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
           +N L++ +      + +EEA  +   M   GI+PD VTY+T+  A++  G     E++  
Sbjct: 127 FNSLIKGYLDITDTDGVEEALTL---MEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFD 183

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +M   ++ P+ +   I+  GY + G  + A   L  M +  +  N+V+F ++I G +
Sbjct: 184 DMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGVV 240



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 60/121 (49%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   EA      + E G  P  + + +L+           +   ++ +E+ G+KPD + 
Sbjct: 102 EGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVT 161

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ ++NA S SG +D   +IF  M  +  +P    Y+ L KGY   G+P+++  LL  M+
Sbjct: 162 YSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMT 221

Query: 127 Q 127
           +
Sbjct: 222 K 222


>gi|302766812|ref|XP_002966826.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
 gi|300164817|gb|EFJ31425.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
          Length = 484

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/441 (42%), Positives = 282/441 (63%), Gaps = 15/441 (3%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK-DGMKPDSILFNAMINACSESGNVD 81
           +GHRP++  YT  +A +  +K+      L+ ++E+ DG+ PDS+ FN +IN     G ++
Sbjct: 45  QGHRPSVECYTVAIAEVVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQME 104

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL-LQLMSQDKN---------- 130
           EAM++ Q+M+   C+PTTSTYNTLIKGYG  G+ E++ +L L L+++ +N          
Sbjct: 105 EAMRVVQEMRQKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGLEP 164

Query: 131 -VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
             +PN RT N L+ AWC +  +EEAW VV  + ++G+QPDAVTYNTLA+AYA  G     
Sbjct: 165 VARPNLRTMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRVAEL 224

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
           E ++ +M+N +++PN RT  I++S YC+ G  E  ++ L R+K   +HP++V FN+L+KG
Sbjct: 225 EDLIADMKNARLKPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLHPDVVAFNTLLKG 284

Query: 250 FLDIKDSD-GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           +    D    ++  L LM   GV+PDV T+STIM+ WSSAG+  K Q I  +M +  ++P
Sbjct: 285 YSQENDQQLKLEMVLDLMAANGVRPDVTTYSTIMNWWSSAGMADKAQTILLEMQQDRVKP 344

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D+  F+ILAKGYVR+G   +AES+L  M  +GV PNVV++TT+ISGWC+  +M  A+ + 
Sbjct: 345 DVRAFAILAKGYVRSGRTHEAESLLQDMSLHGVAPNVVVYTTIISGWCSMGRMDDALRVL 404

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           E M E G  PNL T +TL+WG+ EA+QP  AEE++  M   G+      + ++A +W A+
Sbjct: 405 ELMLERGEAPNLNTVQTLVWGFCEARQPREAEEMVAAMAAAGLPVDSKCLDMIASAWSAL 464

Query: 429 GLAREAKRVLKSAEEDRQSMP 449
           G   E  R+L S +  RQ  P
Sbjct: 465 GFPFETDRILAS-DRRRQLSP 484



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 181/369 (49%), Gaps = 15/369 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLV----AALTRQKRFKSILSLISKVE 56
           +N    +G+  EA  +   + ++  RPT  TY TL+     A   ++  + +L L++K  
Sbjct: 94  INGWCNEGQMEEAMRVVQEMRQKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTR 153

Query: 57  -----KDGM----KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIK 107
                +DG+    +P+    N ++NA    G ++EA ++   +K +G +P   TYNTL K
Sbjct: 154 NSPSSEDGLEPVARPNLRTMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAK 213

Query: 108 GYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ 167
            Y   G+  E   L+  M ++  +KPN RTY IL+  +C     E    ++ ++   G+ 
Sbjct: 214 AYAAAGRVAELEDLIADM-KNARLKPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLH 272

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFE-MQNNQVRPNERTCGIIVSGYCKEGNMEDAMR 226
           PD V +NTL + Y+Q  +     +M+ + M  N VRP+  T   I++ +   G  + A  
Sbjct: 273 PDVVAFNTLLKGYSQENDQQLKLEMVLDLMAANGVRPDVTTYSTIMNWWSSAGMADKAQT 332

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
            L  M++  V P++  F  L KG++    +   +  L  M   GV P+VV ++TI+  W 
Sbjct: 333 ILLEMQQDRVKPDVRAFAILAKGYVRSGRTHEAESLLQDMSLHGVAPNVVVYTTIISGWC 392

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
           S G M     + + M++ G  P+++    L  G+  A +P++AE ++ +M   G+  +  
Sbjct: 393 SMGRMDDALRVLELMLERGEAPNLNTVQTLVWGFCEARQPREAEEMVAAMAAAGLPVDSK 452

Query: 347 MFTTVISGW 355
               + S W
Sbjct: 453 CLDMIASAW 461



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 165/324 (50%), Gaps = 2/324 (0%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
           +E   RP L T  TL+ A  R+ R +    +++ ++  GM+PD++ +N +  A + +G V
Sbjct: 162 LEPVARPNLRTMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRV 221

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
            E   +   MK++  KP   TY  LI  Y   G PE  L+LL  + + + + P+   +N 
Sbjct: 222 AELEDLIADMKNARLKPNLRTYAILISCYCQNGMPERGLQLLSRL-KFEGLHPDVVAFNT 280

Query: 141 LVRAWCSKNSIEEAWNVVYK-MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           L++ +  +N  +    +V   M A+G++PD  TY+T+   ++  G   +A+ +L EMQ +
Sbjct: 281 LLKGYSQENDQQLKLEMVLDLMAANGVRPDVTTYSTIMNWWSSAGMADKAQTILLEMQQD 340

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           +V+P+ R   I+  GY + G   +A   L  M    V PN+VV+ ++I G+  +   D  
Sbjct: 341 RVKPDVRAFAILAKGYVRSGRTHEAESLLQDMSLHGVAPNVVVYTTIISGWCSMGRMDDA 400

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            + L LM E G  P++ T  T++  +  A    + +E+   M  AG+  D     ++A  
Sbjct: 401 LRVLELMLERGEAPNLNTVQTLVWGFCEARQPREAEEMVAAMAAAGLPVDSKCLDMIASA 460

Query: 320 YVRAGEPQKAESILTSMRKYGVHP 343
           +   G P + + IL S R+  + P
Sbjct: 461 WSALGFPFETDRILASDRRRQLSP 484



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 139/290 (47%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G+  EA  +   +   G +P  +TY TL  A     R   +  LI+ ++   +
Sbjct: 177 LNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRVAELEDLIADMKNARL 236

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP+   +  +I+   ++G  +  +++  ++K  G  P    +NTL+KGY      +  L+
Sbjct: 237 KPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLHPDVVAFNTLLKGYSQENDQQLKLE 296

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           ++  +     V+P+  TY+ ++  W S    ++A  ++ +M    ++PD   +  LA+ Y
Sbjct: 297 MVLDLMAANGVRPDVTTYSTIMNWWSSAGMADKAQTILLEMQQDRVKPDVRAFAILAKGY 356

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G T+ AE +L +M  + V PN      I+SG+C  G M+DA+R L  M E    PNL
Sbjct: 357 VRSGRTHEAESLLQDMSLHGVAPNVVVYTTIISGWCSMGRMDDALRVLELMLERGEAPNL 416

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
               +L+ GF + +     ++ +  M   G+  D      I  AWS+ G 
Sbjct: 417 NTVQTLVWGFCEARQPREAEEMVAAMAAAGLPVDSKCLDMIASAWSALGF 466


>gi|302755512|ref|XP_002961180.1| hypothetical protein SELMODRAFT_21211 [Selaginella moellendorffii]
 gi|300172119|gb|EFJ38719.1| hypothetical protein SELMODRAFT_21211 [Selaginella moellendorffii]
          Length = 497

 Score =  367 bits (941), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 188/454 (41%), Positives = 287/454 (63%), Gaps = 28/454 (6%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK-DGMKPDSILFNAMINACSESGNVD 81
           +GHRP++  YT  +A +  +K+      L+ ++E+ DG+ PDS+ FN +IN     G ++
Sbjct: 45  QGHRPSVECYTVAIAEVVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQME 104

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL-LQLMSQDKN---------- 130
           EAM++ Q+M+   C+PTTSTYNTLIKGYG  G+ E++ +L L L+++ +N          
Sbjct: 105 EAMRVVQEMRQKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGLEP 164

Query: 131 -VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
             +PN RT N L+ AWC +  +EEAW VV  + ++G+QPDAVTYNTLA+AYA  G     
Sbjct: 165 VARPNLRTMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRVAEL 224

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
           E ++ +M+N +++PN RT  I++S YC+ G  E  ++ L R+K   +HP++V FN+L+KG
Sbjct: 225 EDLIADMKNARLKPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLHPDVVAFNTLLKG 284

Query: 250 FLDIK-----------DSD---GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           +++ +           ++D    ++  L LM   GV+PDV T+STIM+ WSSAG+  K Q
Sbjct: 285 YVEQQSSQQQQDFQSQENDQQLKLEMVLDLMAANGVRPDVTTYSTIMNWWSSAGVADKAQ 344

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
            I  +M +  ++PD+  F+ILAKGYVR+G   +AES+L  M  +GV PNVV++TT+ISGW
Sbjct: 345 TILLEMQQDRVKPDVRAFAILAKGYVRSGRTHEAESLLQDMSLHGVAPNVVVYTTIISGW 404

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C+  +M  A+ + E M E G  PNL T +TL+WG+ EA+QP  AEE++  M   G+    
Sbjct: 405 CSMGRMDDALRVLELMLERGEAPNLNTVQTLVWGFCEARQPREAEEMVAAMAAAGLPVDS 464

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEEDRQSMP 449
             + ++A +W A+G   E  R+L S +  RQ  P
Sbjct: 465 KCLDMIASAWSALGFPFETDRILAS-DRRRQLSP 497



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 180/382 (47%), Gaps = 28/382 (7%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLV----AALTRQKRFKSILSLISKVE 56
           +N    +G+  EA  +   + ++  RPT  TY TL+     A   ++  + +L L++K  
Sbjct: 94  INGWCNEGQMEEAMRVVQEMRQKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTR 153

Query: 57  -----KDGM----KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIK 107
                +DG+    +P+    N ++NA    G ++EA ++   +K +G +P   TYNTL K
Sbjct: 154 NSPSSEDGLEPVARPNLRTMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAK 213

Query: 108 GYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ 167
            Y   G+  E   L+  M ++  +KPN RTY IL+  +C     E    ++ ++   G+ 
Sbjct: 214 AYAAAGRVAELEDLIADM-KNARLKPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLH 272

Query: 168 PDAVTYNTLARAYAQY--------------GETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           PD V +NTL + Y +                +  + E +L  M  N VRP+  T   I++
Sbjct: 273 PDVVAFNTLLKGYVEQQSSQQQQDFQSQENDQQLKLEMVLDLMAANGVRPDVTTYSTIMN 332

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
            +   G  + A   L  M++  V P++  F  L KG++    +   +  L  M   GV P
Sbjct: 333 WWSSAGVADKAQTILLEMQQDRVKPDVRAFAILAKGYVRSGRTHEAESLLQDMSLHGVAP 392

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           +VV ++TI+  W S G M     + + M++ G  P+++    L  G+  A +P++AE ++
Sbjct: 393 NVVVYTTIISGWCSMGRMDDALRVLELMLERGEAPNLNTVQTLVWGFCEARQPREAEEMV 452

Query: 334 TSMRKYGVHPNVVMFTTVISGW 355
            +M   G+  +      + S W
Sbjct: 453 AAMAAAGLPVDSKCLDMIASAW 474



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 165/337 (48%), Gaps = 15/337 (4%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
           +E   RP L T  TL+ A  R+ R +    +++ ++  GM+PD++ +N +  A + +G V
Sbjct: 162 LEPVARPNLRTMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRV 221

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
            E   +   MK++  KP   TY  LI  Y   G PE  L+LL  + + + + P+   +N 
Sbjct: 222 AELEDLIADMKNARLKPNLRTYAILISCYCQNGMPERGLQLLSRL-KFEGLHPDVVAFNT 280

Query: 141 LVRAWCS-------------KNSIEEAWNVVYK-MVASGIQPDAVTYNTLARAYAQYGET 186
           L++ +               +N  +    +V   M A+G++PD  TY+T+   ++  G  
Sbjct: 281 LLKGYVEQQSSQQQQDFQSQENDQQLKLEMVLDLMAANGVRPDVTTYSTIMNWWSSAGVA 340

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A+ +L EMQ ++V+P+ R   I+  GY + G   +A   L  M    V PN+VV+ ++
Sbjct: 341 DKAQTILLEMQQDRVKPDVRAFAILAKGYVRSGRTHEAESLLQDMSLHGVAPNVVVYTTI 400

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G+  +   D   + L LM E G  P++ T  T++  +  A    + +E+   M  AG+
Sbjct: 401 ISGWCSMGRMDDALRVLELMLERGEAPNLNTVQTLVWGFCEARQPREAEEMVAAMAAAGL 460

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
             D     ++A  +   G P + + IL S R+  + P
Sbjct: 461 PVDSKCLDMIASAWSALGFPFETDRILASDRRRQLSP 497



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 144/304 (47%), Gaps = 15/304 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G+  EA  +   +   G +P  +TY TL  A     R   +  LI+ ++   +
Sbjct: 177 LNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRVAELEDLIADMKNARL 236

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY----------- 109
           KP+   +  +I+   ++G  +  +++  ++K  G  P    +NTL+KGY           
Sbjct: 237 KPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLHPDVVAFNTLLKGYVEQQSSQQQQD 296

Query: 110 GNVGKPEESLKL---LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGI 166
               + ++ LKL   L LM+ +  V+P+  TY+ ++  W S    ++A  ++ +M    +
Sbjct: 297 FQSQENDQQLKLEMVLDLMAAN-GVRPDVTTYSTIMNWWSSAGVADKAQTILLEMQQDRV 355

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR 226
           +PD   +  LA+ Y + G T+ AE +L +M  + V PN      I+SG+C  G M+DA+R
Sbjct: 356 KPDVRAFAILAKGYVRSGRTHEAESLLQDMSLHGVAPNVVVYTTIISGWCSMGRMDDALR 415

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
            L  M E    PNL    +L+ GF + +     ++ +  M   G+  D      I  AWS
Sbjct: 416 VLELMLERGEAPNLNTVQTLVWGFCEARQPREAEEMVAAMAAAGLPVDSKCLDMIASAWS 475

Query: 287 SAGL 290
           + G 
Sbjct: 476 ALGF 479


>gi|295830911|gb|ADG39124.1| AT5G21222-like protein [Capsella grandiflora]
          Length = 166

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 121/166 (72%), Positives = 150/166 (90%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           LIEEGH+P++ITYTTLV ALTRQK F S+LSLISKVEK+G+KPD+ILFNA+INA SESGN
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D+AMKIF+KMK+SGCKPTTST+NTLIKGYG +GK EES +LL+LM +D+ ++PNDRT N
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCN 120

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           ILV+AWC++  IEEAWN+VYKM + G++PD VT+NTLARAYA+ GE
Sbjct: 121 ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAYARIGE 166



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 84/155 (54%), Gaps = 1/155 (0%)

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P+++ + +L+      K    +   ++ +E+ G+KPD + F+ I++A S +G + +  +I
Sbjct: 8   PSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 67

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM-RKYGVHPNVVMFTTVISGWC 356
           F+ M ++G +P    F+ L KGY + G+ +++  +L  M R   + PN      ++  WC
Sbjct: 68  FEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAWC 127

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           N  K++ A +I  KM   G+ P++ T+ TL   Y 
Sbjct: 128 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAYA 162



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 1/166 (0%)

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           ++  G +P  +TY TL  A  +    +    ++ +++ N ++P+      I++   + GN
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM-EEFGVKPDVVTFS 279
           ++ AM+   +MKE    P    FN+LIKG+  I   +   + L LM  +  ++P+  T +
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCN 120

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
            ++ AW +   + +   I   M   G++PD+  F+ LA+ Y R GE
Sbjct: 121 ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAYARIGE 166



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 84/159 (52%), Gaps = 1/159 (0%)

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KP+  TY  LV A   +       +++ K+  +G++PD + +N +  A ++ G   +A +
Sbjct: 7   KPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 66

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHPNLVVFNSLIKGF 250
           +  +M+ +  +P   T   ++ GY K G +E++ R L  M   E + PN    N L++ +
Sbjct: 67  IFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAW 126

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            + +  +     +  M+ +GVKPDVVTF+T+  A++  G
Sbjct: 127 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAYARIG 165



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 66/126 (52%), Gaps = 1/126 (0%)

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +++ G +P I  ++ L     R        S+++ + K G+ P+ ++F  +I+    +  
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM-EEKGVRPKKSTIQ 419
           + +AM I+EKM E G  P   T+ TL+ GYG+  +   +  LL++M  ++ ++P   T  
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCN 120

Query: 420 LVADSW 425
           ++  +W
Sbjct: 121 ILVQAW 126



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 1/108 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM-KPDSIL 66
           G   +A  IF  + E G +PT  T+ TL+    +  + +    L+  + +D M +P+   
Sbjct: 59  GNLDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRT 118

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK 114
            N ++ A      ++EA  I  KM+  G KP   T+NTL + Y  +G+
Sbjct: 119 CNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAYARIGE 166



 Score = 46.2 bits (108), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 24/113 (21%), Positives = 53/113 (46%)

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
           G  P+++ +TT+++           +S+  K+ + G+ P+   +  ++    E+    +A
Sbjct: 5   GHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 64

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK 452
            ++ + M+E G +P  ST   +   +  IG   E+ R+L+    D    PN +
Sbjct: 65  MKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDR 117


>gi|295830913|gb|ADG39125.1| AT5G21222-like protein [Capsella grandiflora]
          Length = 166

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 120/166 (72%), Positives = 150/166 (90%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           LIEEGH+P++ITYTTLV ALTRQK F S+LSLISKVEK+G+KPD+ILFNA+INA SESGN
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D+AMKIF+KMK+SGCKPTTST+NTLIKGYG +GK EES +LL+LM +D+ ++PNDRT N
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCN 120

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           ILV+AWC++  IEEAWN+VYKM + G++PD VT+NTLA+AYA+ GE
Sbjct: 121 ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGE 166



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 84/155 (54%), Gaps = 1/155 (0%)

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P+++ + +L+      K    +   ++ +E+ G+KPD + F+ I++A S +G + +  +I
Sbjct: 8   PSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 67

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM-RKYGVHPNVVMFTTVISGWC 356
           F+ M ++G +P    F+ L KGY + G+ +++  +L  M R   + PN      ++  WC
Sbjct: 68  FEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCNILVQAWC 127

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           N  K++ A +I  KM   G+ P++ T+ TL   Y 
Sbjct: 128 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYA 162



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 1/166 (0%)

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           ++  G +P  +TY TL  A  +    +    ++ +++ N ++P+      I++   + GN
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM-EEFGVKPDVVTFS 279
           ++ AM+   +MKE    P    FN+LIKG+  J   +   + L LM  +  ++P+  T +
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCN 120

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
            ++ AW +   + +   I   M   G++PD+  F+ LAK Y R GE
Sbjct: 121 ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGE 166



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 84/159 (52%), Gaps = 1/159 (0%)

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KP+  TY  LV A   +       +++ K+  +G++PD + +N +  A ++ G   +A +
Sbjct: 7   KPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 66

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHPNLVVFNSLIKGF 250
           +  +M+ +  +P   T   ++ GY K G +E++ R L  M   E + PN    N L++ +
Sbjct: 67  IFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCNILVQAW 126

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            + +  +     +  M+ +GVKPDVVTF+T+  A++  G
Sbjct: 127 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIG 165



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 66/126 (52%), Gaps = 1/126 (0%)

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +++ G +P I  ++ L     R        S+++ + K G+ P+ ++F  +I+    +  
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM-EEKGVRPKKSTIQ 419
           + +AM I+EKM E G  P   T+ TL+ GYG+  +   +  LL++M  ++ ++P   T  
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCN 120

Query: 420 LVADSW 425
           ++  +W
Sbjct: 121 ILVQAW 126



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 1/108 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM-KPDSIL 66
           G   +A  IF  + E G +PT  T+ TL+    +  + +    L+  + +D M +P+   
Sbjct: 59  GNLDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRT 118

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK 114
            N ++ A      ++EA  I  KM+  G KP   T+NTL K Y  +G+
Sbjct: 119 CNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGE 166



 Score = 45.8 bits (107), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 23/113 (20%), Positives = 53/113 (46%)

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
           G  P+++ +TT+++           +S+  K+ + G+ P+   +  ++    E+    +A
Sbjct: 5   GHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 64

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK 452
            ++ + M+E G +P  ST   +   +  JG   E+ R+L+    D    PN +
Sbjct: 65  MKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDR 117


>gi|295830915|gb|ADG39126.1| AT5G21222-like protein [Capsella grandiflora]
          Length = 166

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 120/166 (72%), Positives = 150/166 (90%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           LIEEGH+P++ITYTTLV ALTRQK F S+LSLISKVEK+G+KPD+ILFNA+INA SESGN
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D+AMKIF+KMK+SGCKPTTST+NTLIKGYG +GK EES +LL+LM +D+ ++PNDRT N
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCN 120

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           ILV+AWC++  IEEAWN+VYKM + G++PD VT+NTLA+AYA+ GE
Sbjct: 121 ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGE 166



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 84/155 (54%), Gaps = 1/155 (0%)

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P+++ + +L+      K    +   ++ +E+ G+KPD + F+ I++A S +G + +  +I
Sbjct: 8   PSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 67

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM-RKYGVHPNVVMFTTVISGWC 356
           F+ M ++G +P    F+ L KGY + G+ +++  +L  M R   + PN      ++  WC
Sbjct: 68  FEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAWC 127

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           N  K++ A +I  KM   G+ P++ T+ TL   Y 
Sbjct: 128 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYA 162



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 84/166 (50%), Gaps = 1/166 (0%)

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           ++  G +P  +TY TL  A  +    +    ++ +++ N ++P+      I++   + GN
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM-EEFGVKPDVVTFS 279
           ++ AM+   +MKE    P    FN+LIKG+  I   +   + L LM  +  ++P+  T +
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCN 120

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
            ++ AW +   + +   I   M   G++PD+  F+ LAK Y R GE
Sbjct: 121 ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGE 166



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 84/159 (52%), Gaps = 1/159 (0%)

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KP+  TY  LV A   +       +++ K+  +G++PD + +N +  A ++ G   +A +
Sbjct: 7   KPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 66

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHPNLVVFNSLIKGF 250
           +  +M+ +  +P   T   ++ GY K G +E++ R L  M   E + PN    N L++ +
Sbjct: 67  IFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAW 126

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            + +  +     +  M+ +GVKPDVVTF+T+  A++  G
Sbjct: 127 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIG 165



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 66/126 (52%), Gaps = 1/126 (0%)

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +++ G +P I  ++ L     R        S+++ + K G+ P+ ++F  +I+    +  
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM-EEKGVRPKKSTIQ 419
           + +AM I+EKM E G  P   T+ TL+ GYG+  +   +  LL++M  ++ ++P   T  
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCN 120

Query: 420 LVADSW 425
           ++  +W
Sbjct: 121 ILVQAW 126



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 1/108 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM-KPDSIL 66
           G   +A  IF  + E G +PT  T+ TL+    +  + +    L+  + +D M +P+   
Sbjct: 59  GNLDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRT 118

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK 114
            N ++ A      ++EA  I  KM+  G KP   T+NTL K Y  +G+
Sbjct: 119 CNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGE 166



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 24/113 (21%), Positives = 53/113 (46%)

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
           G  P+++ +TT+++           +S+  K+ + G+ P+   +  ++    E+    +A
Sbjct: 5   GHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 64

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK 452
            ++ + M+E G +P  ST   +   +  IG   E+ R+L+    D    PN +
Sbjct: 65  MKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDR 117


>gi|295830917|gb|ADG39127.1| AT5G21222-like protein [Capsella grandiflora]
          Length = 166

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 120/166 (72%), Positives = 149/166 (89%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           LIEEGH+P++ITYTTLV ALTRQK F S+LSLISKVEK+G+KPD+ILFNA+INA SESGN
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D+AMKIF+KMK+SGCKPTTST+NTLIKGYG +GK EES +LL+LM +D+ ++PNDRT N
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCN 120

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           ILV+AWC++  IEEAWN+VYKM + G++PD VT+NTLA AYA+ GE
Sbjct: 121 ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYARIGE 166



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 84/155 (54%), Gaps = 1/155 (0%)

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P+++ + +L+      K    +   ++ +E+ G+KPD + F+ I++A S +G + +  +I
Sbjct: 8   PSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 67

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM-RKYGVHPNVVMFTTVISGWC 356
           F+ M ++G +P    F+ L KGY + G+ +++  +L  M R   + PN      ++  WC
Sbjct: 68  FEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAWC 127

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           N  K++ A +I  KM   G+ P++ T+ TL   Y 
Sbjct: 128 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYA 162



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 83/166 (50%), Gaps = 1/166 (0%)

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           ++  G +P  +TY TL  A  +    +    ++ +++ N ++P+      I++   + GN
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM-EEFGVKPDVVTFS 279
           ++ AM+   +MKE    P    FN+LIKG+  I   +   + L LM  +  ++P+  T +
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCN 120

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
            ++ AW +   + +   I   M   G++PD+  F+ LA  Y R GE
Sbjct: 121 ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYARIGE 166



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 84/159 (52%), Gaps = 1/159 (0%)

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KP+  TY  LV A   +       +++ K+  +G++PD + +N +  A ++ G   +A +
Sbjct: 7   KPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 66

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHPNLVVFNSLIKGF 250
           +  +M+ +  +P   T   ++ GY K G +E++ R L  M   E + PN    N L++ +
Sbjct: 67  IFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAW 126

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            + +  +     +  M+ +GVKPDVVTF+T+  A++  G
Sbjct: 127 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYARIG 165



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 66/126 (52%), Gaps = 1/126 (0%)

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +++ G +P I  ++ L     R        S+++ + K G+ P+ ++F  +I+    +  
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM-EEKGVRPKKSTIQ 419
           + +AM I+EKM E G  P   T+ TL+ GYG+  +   +  LL++M  ++ ++P   T  
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCN 120

Query: 420 LVADSW 425
           ++  +W
Sbjct: 121 ILVQAW 126



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 1/108 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM-KPDSIL 66
           G   +A  IF  + E G +PT  T+ TL+    +  + +    L+  + +D M +P+   
Sbjct: 59  GNLDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRT 118

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK 114
            N ++ A      ++EA  I  KM+  G KP   T+NTL   Y  +G+
Sbjct: 119 CNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYARIGE 166



 Score = 46.6 bits (109), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 24/113 (21%), Positives = 53/113 (46%)

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
           G  P+++ +TT+++           +S+  K+ + G+ P+   +  ++    E+    +A
Sbjct: 5   GHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 64

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK 452
            ++ + M+E G +P  ST   +   +  IG   E+ R+L+    D    PN +
Sbjct: 65  MKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDR 117


>gi|295830909|gb|ADG39123.1| AT5G21222-like protein [Capsella grandiflora]
 gi|295830919|gb|ADG39128.1| AT5G21222-like protein [Capsella grandiflora]
          Length = 166

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 120/166 (72%), Positives = 149/166 (89%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           LIEEGH+P++ITYTTLV ALTRQK F S+LSLISKVEK+G+KPD+ILFNA+INA SESGN
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D+AMKIF+KMK+SGCKPTTST+NTLIKGYG +GK EES +LL+LM +D+ ++PNDRT N
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCN 120

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           ILV+AWC++  IEEAWN+VYKM + G++PD VT+NTLA AYA+ GE
Sbjct: 121 ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYARIGE 166



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 84/155 (54%), Gaps = 1/155 (0%)

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P+++ + +L+      K    +   ++ +E+ G+KPD + F+ I++A S +G + +  +I
Sbjct: 8   PSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 67

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM-RKYGVHPNVVMFTTVISGWC 356
           F+ M ++G +P    F+ L KGY + G+ +++  +L  M R   + PN      ++  WC
Sbjct: 68  FEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCNILVQAWC 127

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           N  K++ A +I  KM   G+ P++ T+ TL   Y 
Sbjct: 128 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYA 162



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 83/166 (50%), Gaps = 1/166 (0%)

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           ++  G +P  +TY TL  A  +    +    ++ +++ N ++P+      I++   + GN
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM-EEFGVKPDVVTFS 279
           ++ AM+   +MKE    P    FN+LIKG+  J   +   + L LM  +  ++P+  T +
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCN 120

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
            ++ AW +   + +   I   M   G++PD+  F+ LA  Y R GE
Sbjct: 121 ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYARIGE 166



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 84/159 (52%), Gaps = 1/159 (0%)

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KP+  TY  LV A   +       +++ K+  +G++PD + +N +  A ++ G   +A +
Sbjct: 7   KPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 66

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHPNLVVFNSLIKGF 250
           +  +M+ +  +P   T   ++ GY K G +E++ R L  M   E + PN    N L++ +
Sbjct: 67  IFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCNILVQAW 126

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            + +  +     +  M+ +GVKPDVVTF+T+  A++  G
Sbjct: 127 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYARIG 165



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 66/126 (52%), Gaps = 1/126 (0%)

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +++ G +P I  ++ L     R        S+++ + K G+ P+ ++F  +I+    +  
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM-EEKGVRPKKSTIQ 419
           + +AM I+EKM E G  P   T+ TL+ GYG+  +   +  LL++M  ++ ++P   T  
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCN 120

Query: 420 LVADSW 425
           ++  +W
Sbjct: 121 ILVQAW 126



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 1/108 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM-KPDSIL 66
           G   +A  IF  + E G +PT  T+ TL+    +  + +    L+  + +D M +P+   
Sbjct: 59  GNLDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRT 118

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK 114
            N ++ A      ++EA  I  KM+  G KP   T+NTL   Y  +G+
Sbjct: 119 CNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYARIGE 166



 Score = 45.8 bits (107), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 23/113 (20%), Positives = 53/113 (46%)

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
           G  P+++ +TT+++           +S+  K+ + G+ P+   +  ++    E+    +A
Sbjct: 5   GHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 64

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK 452
            ++ + M+E G +P  ST   +   +  JG   E+ R+L+    D    PN +
Sbjct: 65  MKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDR 117


>gi|295830921|gb|ADG39129.1| AT5G21222-like protein [Neslia paniculata]
          Length = 166

 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 116/165 (70%), Positives = 148/165 (89%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           LIEEGH+P++ITYTTLV ALTRQK F S+LSLISKVEK+G+KPD+ILFNA+INA SESGN
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D+AMKIF++MK+SGCKPTTST+NTLIKGYG +GK EES +LL++M +D+ ++PNDRT N
Sbjct: 61  LDQAMKIFEQMKESGCKPTTSTFNTLIKGYGKLGKLEESSRLLEMMLRDEMLQPNDRTCN 120

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           ILV+AWC++  +EEAW +VYKM + G++PD VT+NTLARAYA+ G
Sbjct: 121 ILVQAWCNQRKVEEAWQIVYKMQSYGVKPDVVTFNTLARAYARIG 165



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 83/155 (53%), Gaps = 1/155 (0%)

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P+++ + +L+      K    +   ++ +E+ G+KPD + F+ I++A S +G + +  +I
Sbjct: 8   PSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 67

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM-RKYGVHPNVVMFTTVISGWC 356
           F+ M ++G +P    F+ L KGY + G+ +++  +L  M R   + PN      ++  WC
Sbjct: 68  FEQMKESGCKPTTSTFNTLIKGYGKLGKLEESSRLLEMMLRDEMLQPNDRTCNILVQAWC 127

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           N  K++ A  I  KM   G+ P++ T+ TL   Y 
Sbjct: 128 NQRKVEEAWQIVYKMQSYGVKPDVVTFNTLARAYA 162



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 85/159 (53%), Gaps = 1/159 (0%)

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KP+  TY  LV A   +       +++ K+  +G++PD + +N +  A ++ G   +A +
Sbjct: 7   KPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 66

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHPNLVVFNSLIKGF 250
           +  +M+ +  +P   T   ++ GY K G +E++ R L  M   E + PN    N L++ +
Sbjct: 67  IFEQMKESGCKPTTSTFNTLIKGYGKLGKLEESSRLLEMMLRDEMLQPNDRTCNILVQAW 126

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            + +  +   + +  M+ +GVKPDVVTF+T+  A++  G
Sbjct: 127 CNQRKVEEAWQIVYKMQSYGVKPDVVTFNTLARAYARIG 165



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 84/165 (50%), Gaps = 1/165 (0%)

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           ++  G +P  +TY TL  A  +    +    ++ +++ N ++P+      I++   + GN
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM-EEFGVKPDVVTFS 279
           ++ AM+   +MKE    P    FN+LIKG+  +   +   + L +M  +  ++P+  T +
Sbjct: 61  LDQAMKIFEQMKESGCKPTTSTFNTLIKGYGKLGKLEESSRLLEMMLRDEMLQPNDRTCN 120

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            ++ AW +   + +  +I   M   G++PD+  F+ LA+ Y R G
Sbjct: 121 ILVQAWCNQRKVEEAWQIVYKMQSYGVKPDVVTFNTLARAYARIG 165



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 84/165 (50%), Gaps = 2/165 (1%)

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           ++G KP  I +  ++ A +   +    + +  K++ +G KP T  +N +I      G  +
Sbjct: 3   EEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLD 62

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG-IQPDAVTYNT 175
           +++K+ + M ++   KP   T+N L++ +     +EE+  ++  M+    +QP+  T N 
Sbjct: 63  QAMKIFEQM-KESGCKPTTSTFNTLIKGYGKLGKLEESSRLLEMMLRDEMLQPNDRTCNI 121

Query: 176 LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           L +A+    +   A Q++++MQ+  V+P+  T   +   Y + G+
Sbjct: 122 LVQAWCNQRKVEEAWQIVYKMQSYGVKPDVVTFNTLARAYARIGS 166



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 66/126 (52%), Gaps = 1/126 (0%)

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +++ G +P I  ++ L     R        S+++ + K G+ P+ ++F  +I+    +  
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM-EEKGVRPKKSTIQ 419
           + +AM I+E+M E G  P   T+ TL+ GYG+  +   +  LL++M  ++ ++P   T  
Sbjct: 61  LDQAMKIFEQMKESGCKPTTSTFNTLIKGYGKLGKLEESSRLLEMMLRDEMLQPNDRTCN 120

Query: 420 LVADSW 425
           ++  +W
Sbjct: 121 ILVQAW 126



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 80/166 (48%), Gaps = 2/166 (1%)

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
           L+EE G KP ++T++T++ A +          +   + K G++PD  +F+ +      +G
Sbjct: 1   LIEE-GHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESG 59

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC-EIGINPNLKTY 383
              +A  I   M++ G  P    F T+I G+    K++ +  + E M  +  + PN +T 
Sbjct: 60  NLDQAMKIFEQMKESGCKPTTSTFNTLIKGYGKLGKLEESSRLLEMMLRDEMLQPNDRTC 119

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
             L+  +   ++   A +++  M+  GV+P   T   +A ++  IG
Sbjct: 120 NILVQAWCNQRKVEEAWQIVYKMQSYGVKPDVVTFNTLARAYARIG 165



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 1/107 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM-KPDSIL 66
           G   +A  IF  + E G +PT  T+ TL+    +  + +    L+  + +D M +P+   
Sbjct: 59  GNLDQAMKIFEQMKESGCKPTTSTFNTLIKGYGKLGKLEESSRLLEMMLRDEMLQPNDRT 118

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVG 113
            N ++ A      V+EA +I  KM+  G KP   T+NTL + Y  +G
Sbjct: 119 CNILVQAWCNQRKVEEAWQIVYKMQSYGVKPDVVTFNTLARAYARIG 165



 Score = 45.4 bits (106), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 23/113 (20%), Positives = 53/113 (46%)

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
           G  P+++ +TT+++           +S+  K+ + G+ P+   +  ++    E+    +A
Sbjct: 5   GHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 64

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK 452
            ++ + M+E G +P  ST   +   +  +G   E+ R+L+    D    PN +
Sbjct: 65  MKIFEQMKESGCKPTTSTFNTLIKGYGKLGKLEESSRLLEMMLRDEMLQPNDR 117


>gi|345293243|gb|AEN83113.1| AT5G21222-like protein, partial [Capsella rubella]
 gi|345293245|gb|AEN83114.1| AT5G21222-like protein, partial [Capsella rubella]
 gi|345293247|gb|AEN83115.1| AT5G21222-like protein, partial [Capsella rubella]
 gi|345293249|gb|AEN83116.1| AT5G21222-like protein, partial [Capsella rubella]
 gi|345293251|gb|AEN83117.1| AT5G21222-like protein, partial [Capsella rubella]
 gi|345293253|gb|AEN83118.1| AT5G21222-like protein, partial [Capsella rubella]
 gi|345293255|gb|AEN83119.1| AT5G21222-like protein, partial [Capsella rubella]
 gi|345293257|gb|AEN83120.1| AT5G21222-like protein, partial [Capsella rubella]
          Length = 160

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 115/160 (71%), Positives = 144/160 (90%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P++ITYTTLV ALTRQK F S+LSLISKVEK+G+KPD+ILFNA+INA SESGN+D+AMK
Sbjct: 1   KPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 60

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           IF+KMK+SGCKPTTST+NTLIKGYG +GK EES +LL+LM +D+ ++PNDRT NILV+AW
Sbjct: 61  IFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAW 120

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           C++  IEEAWN+VYKM + G++PD VT+NTLARAYA+ GE
Sbjct: 121 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAYARIGE 160



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 84/155 (54%), Gaps = 1/155 (0%)

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P+++ + +L+      K    +   ++ +E+ G+KPD + F+ I++A S +G + +  +I
Sbjct: 2   PSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 61

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM-RKYGVHPNVVMFTTVISGWC 356
           F+ M ++G +P    F+ L KGY + G+ +++  +L  M R   + PN      ++  WC
Sbjct: 62  FEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAWC 121

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           N  K++ A +I  KM   G+ P++ T+ TL   Y 
Sbjct: 122 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAYA 156



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 84/159 (52%), Gaps = 1/159 (0%)

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KP+  TY  LV A   +       +++ K+  +G++PD + +N +  A ++ G   +A +
Sbjct: 1   KPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 60

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHPNLVVFNSLIKGF 250
           +  +M+ +  +P   T   ++ GY K G +E++ R L  M   E + PN    N L++ +
Sbjct: 61  IFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAW 120

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            + +  +     +  M+ +GVKPDVVTF+T+  A++  G
Sbjct: 121 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAYARIG 159



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 81/160 (50%), Gaps = 1/160 (0%)

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR 226
           +P  +TY TL  A  +    +    ++ +++ N ++P+      I++   + GN++ AM+
Sbjct: 1   KPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 60

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM-EEFGVKPDVVTFSTIMDAW 285
              +MKE    P    FN+LIKG+  I   +   + L LM  +  ++P+  T + ++ AW
Sbjct: 61  IFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAW 120

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
            +   + +   I   M   G++PD+  F+ LA+ Y R GE
Sbjct: 121 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAYARIGE 160



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 62/120 (51%), Gaps = 1/120 (0%)

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           +P I  ++ L     R        S+++ + K G+ P+ ++F  +I+    +  + +AM 
Sbjct: 1   KPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 60

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM-EEKGVRPKKSTIQLVADSW 425
           I+EKM E G  P   T+ TL+ GYG+  +   +  LL++M  ++ ++P   T  ++  +W
Sbjct: 61  IFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAW 120



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/155 (21%), Positives = 80/155 (51%), Gaps = 1/155 (0%)

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           +P+  T   +V+   ++ +    +  + ++++  + P+ ++FN++I    +  + D   K
Sbjct: 1   KPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 60

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK-AGIEPDIHVFSILAKGY 320
               M+E G KP   TF+T++  +   G + +   + + M++   ++P+    +IL + +
Sbjct: 61  IFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAW 120

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
               + ++A +I+  M+ YGV P+VV F T+   +
Sbjct: 121 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAY 155



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 1/108 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM-KPDSIL 66
           G   +A  IF  + E G +PT  T+ TL+    +  + +    L+  + +D M +P+   
Sbjct: 53  GNLDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRT 112

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK 114
            N ++ A      ++EA  I  KM+  G KP   T+NTL + Y  +G+
Sbjct: 113 CNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAYARIGE 160



 Score = 45.1 bits (105), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 23/110 (20%), Positives = 52/110 (47%)

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           P+++ +TT+++           +S+  K+ + G+ P+   +  ++    E+    +A ++
Sbjct: 2   PSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 61

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK 452
            + M+E G +P  ST   +   +  IG   E+ R+L+    D    PN +
Sbjct: 62  FEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDR 111


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 228/419 (54%), Gaps = 4/419 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P ++TYT L+AA  R K+ +  + L+ ++ + G  P+ + +N +++A  +   V  A
Sbjct: 52  GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAA 111

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
             + +KM + G  P   T+N+L+ G+   G  +++ KLL +M   K ++PN  TY+ L+ 
Sbjct: 112 QDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVA-KGMRPNVVTYSALID 170

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C      EA  V+ +M ASG+ PDA TY+ L     +  +   AEQML  M  +   P
Sbjct: 171 GLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTP 230

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +      I+  +CK G + +A + L  M++    P++V +N++I G   +         L
Sbjct: 231 DVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVIL 290

Query: 264 TLMEEFG-VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
             M+E G V PDVVT+ST+++    + ++ + Q++ D M KAG  PD+  ++ +  G  +
Sbjct: 291 DQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCK 350

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G  ++AE +L  M++ G  PNVV +TT+ISG C A K+  A  + E+M   G  PNL T
Sbjct: 351 CGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVT 410

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEE--KGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           Y T++ G   + +   A++L+Q M++      P  +T + + ++  +  L +EA+++L+
Sbjct: 411 YNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLE 469



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 224/442 (50%), Gaps = 11/442 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G  H A  +   +   G  P   T+T ++ A+         +  +  +   G  P+ + +
Sbjct: 4   GDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTY 60

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGN---VGKPEESLKLLQL 124
            A+I A + +  ++EAMK+ ++M++ GC P   TYN L+        VG  ++ +K +  
Sbjct: 61  TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI- 119

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
              +    PN  T+N LV  +C + ++++A  ++  MVA G++P+ VTY+ L     +  
Sbjct: 120 ---EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQ 176

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +   A+++L EM+ + V P+  T   ++ G CK   +E+A + L RM      P++VV++
Sbjct: 177 KFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYS 236

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           S+I  F          K L  M +    PDVVT++T++D     G + + Q I D M ++
Sbjct: 237 SIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQES 296

Query: 305 G-IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           G + PD+  +S +  G  ++    +A+ +L  M K G +P+VV +TT+I G C   +++ 
Sbjct: 297 GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEE 356

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  + + M   G  PN+ TY TL+ G  +A++   AE +++ M   G  P   T   + +
Sbjct: 357 AEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVN 416

Query: 424 SWRAIGLAREAKRVLKSAEEDR 445
                G  +EA+++++  ++ R
Sbjct: 417 GLCVSGRIKEAQQLVQRMKDGR 438



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 169/333 (50%), Gaps = 4/333 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   +A  +   ++ +G RP ++TY+ L+  L + ++F     ++ +++  G+ PD+  
Sbjct: 140 RGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFT 199

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++A+I+   ++  ++EA ++ ++M  SGC P    Y+++I  +   GK  E+ K LQ M 
Sbjct: 200 YSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMR 259

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG-IQPDAVTYNTLARAYAQYGE 185
           + +   P+  TYN ++   C    I EA  ++ +M  SG + PD VTY+T+     +   
Sbjct: 260 KQRK-SPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDM 318

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A+++L  M      P+  T   I+ G CK G +E+A   L  MK     PN+V + +
Sbjct: 319 LVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTT 378

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV--K 303
           LI G    +  D  ++ +  M   G  P++VT++T+++    +G + + Q++   M   +
Sbjct: 379 LISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGR 438

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           A   PD   +  +    + +   Q+AE +L  M
Sbjct: 439 AECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 148/305 (48%), Gaps = 3/305 (0%)

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C+   +  A  ++ +M ++G  PDA T+  +  A A  G+   A   L  M  +   PN 
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCD---PNV 57

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   +++ + +   +E+AM+ L  M+E    PNLV +N L+     +         +  
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M E G  P+V+TF++++D +   G +   +++   MV  G+ P++  +S L  G  ++ +
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A+ +L  M+  GV P+   ++ +I G C A K++ A  +  +M   G  P++  Y +
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
           ++  + ++ +   A++ LQ M ++   P   T   V D    +G   EA+ +L   +E  
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 446 QSMPN 450
             +P+
Sbjct: 298 DVLPD 302


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 226/419 (53%), Gaps = 4/419 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P ++TYT L+AA  R K+ +  + L+ ++ + G  P+ + +N +++A  +   V  A
Sbjct: 174 GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAA 233

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
             + +KM + G  P   T+N+L+ G+   G  +++ KLL +M   K ++PN  TY+ L+ 
Sbjct: 234 QDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVA-KGMRPNVVTYSALID 292

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C      EA  V+ +M   G+ PDA TY+ L     +  +   AEQML  M  +   P
Sbjct: 293 GLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTP 352

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +      I+  +CK G + +A + L  M++    P++V +N++I G   +         L
Sbjct: 353 DVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVIL 412

Query: 264 TLMEEFG-VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
             M+E G V PDVVT+ST+++    + ++ + Q++ D M KAG  PD+  ++ +  G  +
Sbjct: 413 EQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCK 472

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G  ++AE +L  M++ G  PNVV +TT+ISG C A K+  A  + E+M   G  PNL T
Sbjct: 473 CGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVT 532

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEE--KGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           Y T++ G   + +   A++L+Q M++      P  +T + + ++  +  L +EA+++L+
Sbjct: 533 YNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLE 591



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 212/402 (52%), Gaps = 4/402 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  +   + E G  P L+TY  LV AL +     +   ++ K+ + G  P+ + FN
Sbjct: 194 KLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFN 253

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           ++++   + GNVD+A K+   M   G +P   TY+ LI G     K  E+ ++L+ M + 
Sbjct: 254 SLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM-KT 312

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           + V P+  TY+ L+   C  + IEEA  ++ +M  SG  PD V Y+++  A+ + G+   
Sbjct: 313 RGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLE 372

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL-EVHPNLVVFNSLI 247
           A++ L EM+  +  P+  T   ++ G CK G + +A   L +M+E  +V P++V ++++I
Sbjct: 373 AQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVI 432

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G           K L  M + G  PDVVT++TI+D     G + + + +   M +AG  
Sbjct: 433 NGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCA 492

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P++  ++ L  G  +A +  +AE ++  MR  G  PN+V + T+++G C + +++ A  +
Sbjct: 493 PNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQL 552

Query: 368 YEKMCE--IGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
            ++M +     +P+  TY T++     +     AE+LL+ M+
Sbjct: 553 VQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMK 594



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 207/440 (47%), Gaps = 40/440 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +LV   K  EA  +F   +     P + +Y  +++         + L L+ +++  G 
Sbjct: 84  LQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGF 143

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD+     +I A + +G++D AM   + M   GC P   TY  LI  +    K EE++K
Sbjct: 144 APDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMK 200

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M +++   PN  TYN+LV A C  + +  A +VV KM+  G  P+ +T+N+L    
Sbjct: 201 LLEEM-RERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSL---- 255

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                                          V G+CK GN++DA + L  M    + PN+
Sbjct: 256 -------------------------------VDGFCKRGNVDDARKLLGIMVAKGMRPNV 284

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +++LI G    +      + L  M+  GV PD  T+S ++     A  + + +++   
Sbjct: 285 VTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRR 344

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M  +G  PD+ V+S +   + ++G+  +A+  L  MRK    P+VV + TVI G C   K
Sbjct: 345 MAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGK 404

Query: 361 MQRAMSIYEKMCEIG-INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           +  A  I E+M E G + P++ TY T++ G  ++     A++LL  M + G  P   T  
Sbjct: 405 IAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYT 464

Query: 420 LVADSWRAIGLAREAKRVLK 439
            + D     G   EA+ +L+
Sbjct: 465 TIIDGLCKCGRLEEAEYLLQ 484



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 170/334 (50%), Gaps = 4/334 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   +A  +   ++ +G RP ++TY+ L+  L + ++F     ++ +++  G+ PD+  
Sbjct: 262 RGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFT 321

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++A+I+   ++  ++EA ++ ++M  SGC P    Y+++I  +   GK  E+ K LQ M 
Sbjct: 322 YSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMR 381

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG-IQPDAVTYNTLARAYAQYGE 185
           + +   P+  TYN ++   C    I EA  ++ +M  SG + PD VTY+T+     +   
Sbjct: 382 KQRK-SPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDM 440

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A+++L  M      P+  T   I+ G CK G +E+A   L  MK     PN+V + +
Sbjct: 441 LVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTT 500

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV--K 303
           LI G    +  D  ++ +  M   G  P++VT++T+++    +G + + Q++   M   +
Sbjct: 501 LISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGR 560

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           A   PD   +  +    + +   Q+AE +L  M+
Sbjct: 561 AECSPDAATYRTIVNALMSSDLVQEAEQLLEQMK 594



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 176/355 (49%), Gaps = 8/355 (2%)

Query: 98  TTSTYNTLIKGYGNVGKPEESLKLL--QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
           T  ++N+L++      K  E+  L   +L++   + +P+  +YNI++  +C+   +  A 
Sbjct: 76  TAFSWNSLLQVLVRCKKHREAGDLFRSELLA---SCEPDVCSYNIVISGFCNAGDLHAAL 132

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
            ++ +M ++G  PDA T+  +  A A  G+   A   L  M  +   PN  T   +++ +
Sbjct: 133 ELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCD---PNVVTYTALIAAF 189

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
            +   +E+AM+ L  M+E    PNLV +N L+     +         +  M E G  P+V
Sbjct: 190 ARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNV 249

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           +TF++++D +   G +   +++   MV  G+ P++  +S L  G  ++ +  +A+ +L  
Sbjct: 250 MTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEE 309

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M+  GV P+   ++ +I G C A K++ A  +  +M   G  P++  Y +++  + ++ +
Sbjct: 310 MKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGK 369

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
              A++ LQ M ++   P   T   V D    +G   EA+ +L+  +E    +P+
Sbjct: 370 LLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPD 424



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 4/202 (1%)

Query: 8   GKPHEAHYIFNCLIEEGH-RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           GK  EA  I   + E G   P ++TY+T++  L +         L+ ++ K G  PD + 
Sbjct: 403 GKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVT 462

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +  +I+   + G ++EA  + Q MK +GC P   TY TLI G     K +E+ ++++ M 
Sbjct: 463 YTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM- 521

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV--ASGIQPDAVTYNTLARAYAQYG 184
           ++    PN  TYN +V   C    I+EA  +V +M    +   PDA TY T+  A     
Sbjct: 522 RNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSD 581

Query: 185 ETYRAEQMLFEMQNNQVRPNER 206
               AEQ+L +M++      E+
Sbjct: 582 LVQEAEQLLEQMKSTTSSQQEQ 603


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 219/420 (52%), Gaps = 1/420 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  K K  +A  +F+ +++ GH P +ITY+T++  L +       L L+ K+E+ G KP+
Sbjct: 20  LCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPN 79

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +I++  +   V EAM  F +M   G  P   TY++++ G+ N+G+  E+  L +
Sbjct: 80  VVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFK 139

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + +NV PN  T+ IL+   C K  I EAW V   M   G++PD  TYN L   Y   
Sbjct: 140 QMVE-RNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSR 198

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +   A+++   M      PN R+  I+++G+CK G +++A   L  M    + P++  +
Sbjct: 199 SQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTY 258

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           ++L++GF  +       + L  M  +G+ P+++T+S ++D     G + +  E+   M +
Sbjct: 259 STLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQE 318

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           + IEP+I +++IL +G    G+ + A  + +++   G+ P VV +T +ISG         
Sbjct: 319 SKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNE 378

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  ++ +M   G  PN  TY  ++ G+        A  L++ M  KG     ST ++++D
Sbjct: 379 ACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLSD 438



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 191/383 (49%), Gaps = 1/383 (0%)

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           K G++P  + FN +++       + +A+K+F +M   G +P   TY+T+I G   +G   
Sbjct: 3   KLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTT 62

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
            +L+LL+ M ++K  KPN   YN ++ + C    + EA +   +MV  GI PD  TY+++
Sbjct: 63  MALQLLKKM-EEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSI 121

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
              +   G    A  +  +M    V PN+ T  I++ G CK+  + +A      M E  +
Sbjct: 122 LHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGL 181

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P++  +N+L+ G+      D   K   +M+  G  P+V +++ +++    +G + + + 
Sbjct: 182 EPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKG 241

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +  +M    + PDI  +S L +G+ + G PQ+A+ +L  M  YG+ PN++ ++ V+ G C
Sbjct: 242 LLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLC 301

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
               +  A  + + M E  I PN+  Y  L+ G     +   A EL   +  KG++P   
Sbjct: 302 KHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVV 361

Query: 417 TIQLVADSWRAIGLAREAKRVLK 439
           T  ++       GL+ EA  + +
Sbjct: 362 TYTVMISGLLKGGLSNEACELFR 384



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 161/315 (51%)

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           ++P   T+N L+   CSK  I +A  +  +MV  G +PD +TY+T+     + G T  A 
Sbjct: 6   LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMAL 65

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           Q+L +M+    +PN      I+   CK+  + +AM F   M +  + P++  ++S++ GF
Sbjct: 66  QLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGF 125

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
            ++   +        M E  V P+ VTF+ ++D      ++ +   +F+ M + G+EPD+
Sbjct: 126 CNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDV 185

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
           + ++ L  GY    +  +A+ +   M + G  PNV  +  +I+G C + ++  A  +  +
Sbjct: 186 YTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAE 245

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M    + P++ TY TL+ G+ +  +P  A+ELL+ M   G+ P   T  +V D     G 
Sbjct: 246 MSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGH 305

Query: 431 AREAKRVLKSAEEDR 445
             EA  +LK+ +E +
Sbjct: 306 LDEAFELLKAMQESK 320



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 147/318 (46%), Gaps = 42/318 (13%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+ +EA  +F  ++E    P  +T+T L+  L +++       +   + + G++PD   +
Sbjct: 129 GRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTY 188

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           NA+++       +DEA K+F  M   GC P   +YN LI G+   G+ +E+  LL  MS 
Sbjct: 189 NALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSH 248

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K++ P+  TY+ L+R +C     +EA  ++ +M + G+ P+ +TY+ +     ++G   
Sbjct: 249 -KSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLD 307

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM---------------- 231
            A ++L  MQ +++ PN     I++ G C  G +E A      +                
Sbjct: 308 EAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMI 367

Query: 232 ----------------KELEVH---PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF--- 269
                           +E+ V+   PN   +N +I+GFL   D+     A+ L+EE    
Sbjct: 368 SGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDT---PNAVRLIEEMVGK 424

Query: 270 GVKPDVVTFSTIMDAWSS 287
           G   D  TF  + D  SS
Sbjct: 425 GFSADSSTFRMLSDLESS 442



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 113/254 (44%), Gaps = 39/254 (15%)

Query: 231 MKELEVHPNLVVFNSLIKGFLD-IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
           M +L + P LV FN+L+ G     K  D V K    M + G +PDV+T+STI++     G
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAV-KLFDEMVKMGHEPDVITYSTIINGLCKMG 59

Query: 290 -----------------------------------LMGKCQEIFDDMVKAGIEPDIHVFS 314
                                              L+ +  + F +MVK GI PD+  +S
Sbjct: 60  NTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYS 119

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            +  G+   G   +A S+   M +  V PN V FT +I G C    +  A  ++E M E 
Sbjct: 120 SILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEK 179

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G+ P++ TY  L+ GY    Q   A++L  +M+ KG  P   +  ++ +     G   EA
Sbjct: 180 GLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEA 239

Query: 435 KRVLKSAEEDRQSM 448
           K +L  AE   +S+
Sbjct: 240 KGLL--AEMSHKSL 251


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 224/436 (51%), Gaps = 8/436 (1%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F  +   G  P+ +TY  ++ A  ++   +    LI K+ +DG  PD + +N ++
Sbjct: 63  DARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVM 122

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   +SG V+EA+ +F +M+  GC P   ++NT+I G     K +++ ++   M + +++
Sbjct: 123 DGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM-EARDI 181

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  +Y IL+        + EA+ +  +M+ SGI P AVTYN +            A +
Sbjct: 182 PPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALE 241

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +   M++   RP+  T  I++  +CK G M++A R L RM +    P++V +++LI G  
Sbjct: 242 LFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLC 301

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
            I   D     L  M +   KP VVT +T++     AG + + +E+ D MV +G  PD+ 
Sbjct: 302 SIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 361

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++ L  G+ RAG+ ++A  +L+ M   G+ PNVV +T ++SG C A ++  A  ++ +M
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM 421

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA-------DS 424
              G  PNL TY  L+ G+  A Q     +L   M   G+ P       +A        S
Sbjct: 422 KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRS 481

Query: 425 WRAIGLAREAKRVLKS 440
            RA+ + RE +  L+S
Sbjct: 482 ARALEILREGRESLRS 497



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 185/367 (50%), Gaps = 1/367 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   G+  EA  +FN +   G  P   ++ T++  L +Q +      +  ++E   +
Sbjct: 122 MDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDI 181

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PDS  +  +I+  +++G ++EA K+F++M DSG  P+  TYN +I G       +E+L+
Sbjct: 182 PPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALE 241

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M + K  +P+  T+NIL+ A C +  ++EA+ ++ +M   G  PD VTY+TL    
Sbjct: 242 LFKSM-RSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                   A  +L +M   Q +P   T   ++ G CK G +++A   L  M      P++
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+L+ G      ++   + L+ M   G+ P+VVT++ ++     A  + +   +F  
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M  +G  P++  ++ L  G+  AG+      +   M   G+ P+ V++ T+ +  C + +
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR 480

Query: 361 MQRAMSI 367
             RA+ I
Sbjct: 481 SARALEI 487



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 182/375 (48%), Gaps = 7/375 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK +EA+ +F  +++ G  P+ +TY  ++  +         L L   +   G +P 
Sbjct: 195 LAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPS 254

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              FN +I+A  + G +DEA ++ ++M D G  P   TY+TLI G  ++ + +++  LL+
Sbjct: 255 RFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 314

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + +  KP   T N L+   C    I+EA  V+  MV+SG  PD VTYNTL   + + 
Sbjct: 315 DMVK-RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRA 373

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+T RA ++L +M    + PN  T   +VSG CK   + +A     +MK     PNL  +
Sbjct: 374 GQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTY 433

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF----D 299
            +LI GF      DG  K    M   G+ PD V + T+      +G   +  EI     +
Sbjct: 434 TALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRE 493

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            +       +++ F++   G + AG+ + A   +  M + G  P      ++++G C + 
Sbjct: 494 SLRSEAWGDEVYRFAV--DGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSG 551

Query: 360 KMQRAMSIYEKMCEI 374
           +   A ++ E++ ++
Sbjct: 552 QGGEARAVLEEIMDL 566



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 175/388 (45%), Gaps = 36/388 (9%)

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + PDS  +  +I+  +++G +++A  +FQK+  SG  P+T  Y +LI G       +++ 
Sbjct: 6   VSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +L   M++ +   P+  TYN+++ A C +  +EEA +++ KM+  G  PD VTYNT    
Sbjct: 66  ELFADMNR-RGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT---- 120

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
                                          ++ G CK G +E+A+     M+ L   PN
Sbjct: 121 -------------------------------VMDGLCKSGRVEEALLLFNEMERLGCTPN 149

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
               N++I G       D   +    ME   + PD  ++  ++D  + AG + +  ++F 
Sbjct: 150 RRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFR 209

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            M+ +GI P    ++++  G   A    +A  +  SMR  G  P+   F  +I   C   
Sbjct: 210 RMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRG 269

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           KM  A  + ++M + G  P++ TY TL+ G     +   A  LL+ M ++  +P   T  
Sbjct: 270 KMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN 329

Query: 420 LVADSWRAIGLAREAKRVLKSAEEDRQS 447
            +       G  +EA+ VL +     QS
Sbjct: 330 TLIHGLCKAGRIKEAREVLDAMVSSGQS 357


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 231/474 (48%), Gaps = 42/474 (8%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K H A+ +   + E G  P ++TY+T++    RQ +  +   L  ++ ++G  P+ + +N
Sbjct: 176 KVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYN 235

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +++    +G +DEA ++  +M++ G +P   +Y+TL+ G    GK + +LK+ +  S +
Sbjct: 236 TLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS-N 294

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
            +  P+   Y+ L+   C    ++EA  +  KM  +  +PD VT+  L     +      
Sbjct: 295 GDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQE 354

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A+Q+L  M++    PN  T   ++ G CK G + DA     RM    + PN+V +NSLI 
Sbjct: 355 AQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIH 414

Query: 249 GFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAG---------------- 289
           GF     ++GVD AL LMEE    G  PD++T++T++D     G                
Sbjct: 415 GFCM---TNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF 471

Query: 290 -----------LMGKCQ--------EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
                      + G C+         +FDDM+K  + PD+  FS L +GY  AG    AE
Sbjct: 472 CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAE 531

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +L  M      P+V  +T+++ G+C   +M  A  + ++M + G  PN+ TY  L+  +
Sbjct: 532 RLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAF 591

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
             A +P  A  LL+ M   GV+P   T + +   +   G   EA+++L+  E D
Sbjct: 592 CRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERD 645



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 131/463 (28%), Positives = 231/463 (49%), Gaps = 13/463 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA+ + + + E G +P   +Y TL+A L +  +    L +          PD
Sbjct: 241 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD 300

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + ++ +I    ++G +DEA K+F+KM+++ C+P   T+  L+ G     + +E+ ++L+
Sbjct: 301 VVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 360

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +D+N  PN  TY+ L+   C    + +A  V  +M+  GI+P+ VTYN+L   +   
Sbjct: 361 TM-EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 419

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                A  ++ EM      P+  T   ++ G CK G   +A R    MK    +P+++ +
Sbjct: 420 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITY 479

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + LI GF  ++    +D A TL ++     V PDVVTFST+++ + +AGL+   + + ++
Sbjct: 480 SCLIGGFCKLER---IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 536

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV +   PD++ ++ L  G+ + G   +A  +L  M K G  PNVV +T +I  +C A K
Sbjct: 537 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 596

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
              A  + E+M   G+ PN+ TY +L+ G+        A ++L+ +E    R +     +
Sbjct: 597 PTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLE----RDENCKADM 652

Query: 421 VADSWRAIGLAREAK--RVLKSAEEDRQSMPNKKDEIAVESIH 461
            A      GL R  +    L+  E  +QS    + +I V  I 
Sbjct: 653 FAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIR 695



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 190/396 (47%), Gaps = 4/396 (1%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           ++G    + TY  L  AL R +R      ++      G+ P+   +  +I    +SG++D
Sbjct: 17  QQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLD 76

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +A ++ ++M++SG  P  + YN +I          ++L   + M  +KNV     T+ I+
Sbjct: 77  KACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVI----TWTIM 132

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +   C  N + EA     KM   G  P+  TYN L   + +  + +RA  +L EM+ + +
Sbjct: 133 IDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGL 192

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            PN  T   ++ G+C++  ++ A +   +M E    PNLV +N+L+ G       D   +
Sbjct: 193 APNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYE 252

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            L  M E G++PD  ++ T+M      G +    ++F+D       PD+  +S L  G  
Sbjct: 253 LLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLC 312

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           +AG   +A  +   MR+    P+VV FT ++ G C   ++Q A  + E M +    PN+ 
Sbjct: 313 KAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVI 372

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           TY +L+ G  +  Q   A+E+ + M  +G+ P   T
Sbjct: 373 TYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVT 408



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 200/410 (48%), Gaps = 6/410 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L    +  EA  +   + +    P +ITY++L+  L +  + +    +  ++   G+
Sbjct: 343 MDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGI 402

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ + +N++I+    +  VD A+ + ++M  +GC P   TYNTLI G    G+  E+ +
Sbjct: 403 EPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANR 462

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M + K   P+  TY+ L+  +C    I+ A  +   M+   + PD VT++TL   Y
Sbjct: 463 LFGDM-KAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGY 521

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    AE++L EM  +   P+  T   +V G+CK G M +A R L RM +    PN+
Sbjct: 522 CNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNV 581

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V + +LI  F          + L  M   GV+P+V+T+ +++  +   G + + ++I + 
Sbjct: 582 VTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILER 641

Query: 301 MVK-AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           + +    + D+  + ++  G  R G    A  +L ++++ G  P   ++  +I G C   
Sbjct: 642 LERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGK 701

Query: 360 KMQRAMSIYEKMC-EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           ++ +AM + E+M       PN + YE ++    E  +  R EE   + +E
Sbjct: 702 ELGKAMEVLEEMTLSRKSRPNAEAYEAVIQ---ELAREGRHEEANALADE 748



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 172/371 (46%), Gaps = 6/371 (1%)

Query: 81  DEAMKIFQ-KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           D A++ F    K  G      TYN L +      + +E+  +L+       + PN  TY 
Sbjct: 5   DAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILK-NGWPPGITPNVFTYA 63

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           ++++  C    +++A  ++ +M  SG  PDA  YN +  A  +   T +A      M+  
Sbjct: 64  VVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECE 123

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           +   N  T  I++ G CK   + +A  +  +MK+    PN   +N LI GF  +      
Sbjct: 124 K---NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 180

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
              L  M+E G+ P+VVT+ST++  +     +    ++F  MV+ G  P++  ++ L  G
Sbjct: 181 YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSG 240

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             R G   +A  +L  MR+ G+ P+   + T+++G C   K+  A+ ++E        P+
Sbjct: 241 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD 300

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           +  Y TL+ G  +A +   A +L + M E    P   T   + D        +EA++VL+
Sbjct: 301 VVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 360

Query: 440 SAEEDRQSMPN 450
           +  EDR   PN
Sbjct: 361 TM-EDRNCTPN 370


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 232/474 (48%), Gaps = 42/474 (8%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K H A+ +   + E G  P ++TY+T++    RQ +  +   L  ++ ++G  P+ + +N
Sbjct: 57  KVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYN 116

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +++    +G +DEA ++  +M++ G +P   +Y+TL+ G    GK + +LK+ +  S +
Sbjct: 117 TLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS-N 175

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
            +  P+   Y+ L+   C    ++EA  +  KM  +  +PD VT+  L     +      
Sbjct: 176 GDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQE 235

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A+Q+L  M++    PN  T   ++ G CK G + DA     RM    + PN+V +NSLI 
Sbjct: 236 AQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIH 295

Query: 249 GFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAG---------------- 289
           GF     ++GVD AL LMEE    G  PD++T++T++D     G                
Sbjct: 296 GFCM---TNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF 352

Query: 290 -----------LMGKCQ--------EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
                      + G C+         +FDDM+K  + PD+  FS L +GY  AG    AE
Sbjct: 353 CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAE 412

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +L  M      P+V  +T+++ G+C   +M  A  + ++M + G  PN+ TY  L+  +
Sbjct: 413 RLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAF 472

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
             A +P  A +LL+ M   GV+P   T + +   +   G   EA+++L+  E D
Sbjct: 473 CRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERD 526



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/463 (28%), Positives = 231/463 (49%), Gaps = 13/463 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA+ + + + E G +P   +Y TL+A L +  +    L +          PD
Sbjct: 122 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD 181

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + ++ +I    ++G +DEA K+F+KM+++ C+P   T+  L+ G     + +E+ ++L+
Sbjct: 182 VVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 241

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +D+N  PN  TY+ L+   C    + +A  V  +M+  GI+P+ VTYN+L   +   
Sbjct: 242 TM-EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 300

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                A  ++ EM      P+  T   ++ G CK G   +A R    MK    +P+++ +
Sbjct: 301 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITY 360

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + LI GF  ++    +D A TL ++     V PDVVTFST+++ + +AGL+   + + ++
Sbjct: 361 SCLIGGFCKLER---IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 417

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV +   PD++ ++ L  G+ + G   +A  +L  M K G  PNVV +T +I  +C A K
Sbjct: 418 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 477

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
              A  + E+M   G+ PN+ TY +L+ G+        A ++L+ +E    R +     +
Sbjct: 478 PTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLE----RDENCKADM 533

Query: 421 VADSWRAIGLAREAK--RVLKSAEEDRQSMPNKKDEIAVESIH 461
            A      GL R  +    L+  E  +QS    + +I V  I 
Sbjct: 534 FAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIR 576



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 213/457 (46%), Gaps = 37/457 (8%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
           +IT+T ++  L +  R     +  +K++K G  P+   +N +IN   +   V  A  + +
Sbjct: 7   VITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLK 66

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
           +MK+SG  P   TY+T+I G+    K + + KL + M ++    PN  TYN L+   C  
Sbjct: 67  EMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVEN-GCMPNLVTYNTLLSGLCRN 125

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
             ++EA+ ++ +M   G+QPD  +Y+TL     + G+   A ++  +  N    P+    
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             +++G CK G +++A +   +M+E    P++V F +L+ G           + L  ME+
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE--------------------- 307
               P+V+T+S+++D     G +   QE+F  M+  GIE                     
Sbjct: 246 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 305

Query: 308 --------------PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
                         PDI  ++ L  G  + G   +A  +   M+    +P+V+ ++ +I 
Sbjct: 306 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 365

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G+C   ++  A ++++ M +  + P++ T+ TL+ GY  A     AE LL+ M      P
Sbjct: 366 GFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSP 425

Query: 414 KKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
              T   + D +  +G   EA+RVLK   + R   PN
Sbjct: 426 DVYTYTSLVDGFCKVGRMVEARRVLKRMAK-RGCQPN 461



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 197/403 (48%), Gaps = 6/403 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L    +  EA  +   + +    P +ITY++L+  L +  + +    +  ++   G+
Sbjct: 224 MDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGI 283

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ + +N++I+    +  VD A+ + ++M  +GC P   TYNTLI G    G+  E+ +
Sbjct: 284 EPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANR 343

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M + K   P+  TY+ L+  +C    I+ A  +   M+   + PD VT++TL   Y
Sbjct: 344 LFGDM-KAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGY 402

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    AE++L EM  +   P+  T   +V G+CK G M +A R L RM +    PN+
Sbjct: 403 CNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNV 462

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V + +LI  F          K L  M   GV+P+V+T+ +++  +   G + + +++ + 
Sbjct: 463 VTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLER 522

Query: 301 MVK-AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           + +    + D+  + ++  G  R G    A  +L ++++ G  P   ++  +I G C   
Sbjct: 523 LERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGK 582

Query: 360 KMQRAMSIYEKMC-EIGINPNLKTYETLLWGYGEAKQPWRAEE 401
           ++ +AM + E+M       PN + YE ++    E  +  R EE
Sbjct: 583 ELGKAMEVLEEMTLSRKSRPNAEAYEAVIQ---ELAREGRHEE 622



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 141/293 (48%), Gaps = 4/293 (1%)

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M  +KNV     T+ I++   C  N + EA     KM   G  P+  TYN L   + +  
Sbjct: 1   MECEKNVI----TWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVH 56

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           + +RA  +L EM+ + + PN  T   ++ G+C++  ++ A +   +M E    PNLV +N
Sbjct: 57  KVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYN 116

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +L+ G       D   + L  M E G++PD  ++ T+M      G +    ++F+D    
Sbjct: 117 TLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG 176

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
              PD+  +S L  G  + G   +A  +   MR+    P+VV FT ++ G C   ++Q A
Sbjct: 177 DCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEA 236

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             + E M +    PN+ TY +L+ G  +  Q   A+E+ + M  +G+ P   T
Sbjct: 237 QQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVT 289



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 131/273 (47%)

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR 226
           + + +T+  +     +      A     +M+     PNE T  ++++G+CK   +  A  
Sbjct: 4   EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
            L  MKE  + PN+V ++++I GF      D   K    M E G  P++VT++T++    
Sbjct: 64  LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
             GLM +  E+ D+M + G++PD   +  L  G  + G+   A  +          P+VV
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 183

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            ++T+I+G C   ++  A  ++EKM E    P++ T+  L+ G  +  +   A+++L+ M
Sbjct: 184 AYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 243

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           E++   P   T   + D     G  R+A+ V K
Sbjct: 244 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFK 276



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 1/218 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  +   ++     P + TYT+LV    +  R      ++ ++ K G +P+ + +
Sbjct: 406 GLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTY 465

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            A+I+A   +G    A K+ ++M  +G +P   TY +LI G+   G  EE+ K+L+ + +
Sbjct: 466 TALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLER 525

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D+N K +   Y +++   C    +  A  ++  +  SG  P    Y  L R   Q  E  
Sbjct: 526 DENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELG 585

Query: 188 RAEQMLFEMQ-NNQVRPNERTCGIIVSGYCKEGNMEDA 224
           +A ++L EM  + + RPN      ++    +EG  E+A
Sbjct: 586 KAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEA 623



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 1/145 (0%)

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           E ++  ++I+  G  +A    +A +    M+K G  PN   +  +I+G+C   K+ RA  
Sbjct: 4   EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           + ++M E G+ PN+ TY T++ G+    +   A +L + M E G  P   T   +     
Sbjct: 64  LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123

Query: 427 AIGLAREAKRVLKSAEEDRQSMPNK 451
             GL  EA  +L    E R   P+K
Sbjct: 124 RNGLMDEAYELLDEMRE-RGLQPDK 147


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/440 (31%), Positives = 219/440 (49%), Gaps = 8/440 (1%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +   + E G  P  + Y  L+  L +Q + + +  L+ ++ + G +PD+  +N ++
Sbjct: 180 EARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVV 239

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
               ESG  +EA KI +KM +  C P   TYN+L+ G+  V K +E+ +LL+ M   +  
Sbjct: 240 ACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVG-RRC 298

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P   TY  L+  +   + + +A+ V+  M  +GI PD VTYN L     + G+   A +
Sbjct: 299 APTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHE 358

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L  M      P+  T  I+V+G CK G ++DA   L  M E    PNLV FN++I GF 
Sbjct: 359 LLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFC 418

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                D   K L LM+E    PDVVT+ST++D +  A  M   Q+ F  +   GI PD  
Sbjct: 419 KAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRM---QDAFAIL---GISPDKA 472

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            +S + +G    G+ ++A+ ++  M K G  P    +  +I G C+  +   A+ + + M
Sbjct: 473 SYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVM 532

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
            E G  PNL TY  L+ G  + K+   A  +L VM EKG  P  +T   + D +  I   
Sbjct: 533 SERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKM 592

Query: 432 REAKRVLKSAEEDRQSMPNK 451
             A +  K+   D    P+K
Sbjct: 593 DAAYQCFKTM-RDSGCEPDK 611



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 223/439 (50%), Gaps = 8/439 (1%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA+ + + +I++   P    Y  L+A L +  +  +  +++  + +    PD I + ++I
Sbjct: 110 EAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLI 169

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
             C ++  +DEA K+ +KMK+SG  P T  YN L+ G     + EE  KLL+ M +    
Sbjct: 170 VGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVE-AGR 228

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +P+  +YN +V   C     EEA  ++ KM+     PD VTYN+L   + +  +   AE+
Sbjct: 229 EPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAER 288

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L +M   +  P   T   ++ G+ +   + DA R +  M +  + P+LV +N L+ G  
Sbjct: 289 LLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLC 348

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                +   + L +M E    PDVVT+S +++     G +   + + + M++ G +P++ 
Sbjct: 349 KAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLV 408

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            F+ +  G+ +AG+  +   +L  M++    P+VV ++T+I G+C A +MQ A +I    
Sbjct: 409 TFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAI---- 464

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
             +GI+P+  +Y ++L G     +   A+E++ +M ++G  P  S   L+      +   
Sbjct: 465 --LGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERG 522

Query: 432 REAKRVLKSAEEDRQSMPN 450
            EA ++L+   E R   PN
Sbjct: 523 DEALKMLQVMSE-RGCEPN 540



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/549 (24%), Positives = 246/549 (44%), Gaps = 43/549 (7%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           K +P E +  F     +  +P+  TY  L+   +R    K +L + +++      PD I 
Sbjct: 2   KVRPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVIT 61

Query: 67  FNAMINACSESGN---------------------------------VDEAMKIFQKMKDS 93
            N ++ A  + G+                                 +DEA ++  +M   
Sbjct: 62  HNTILKAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQK 121

Query: 94  GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
            C P  + YN LI G   +GK + +  +L++M + ++  P+  TY  L+   C  N+++E
Sbjct: 122 DCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLE-RSCVPDVITYTSLIVGCCQTNALDE 180

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A  ++ KM  SG+ PD V YN L     +  +     ++L EM      P+  +   +V+
Sbjct: 181 ARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVA 240

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
             C+ G  E+A + L +M E +  P++V +NSL+ GF  +   D  ++ L  M      P
Sbjct: 241 CLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAP 300

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
            V+T++T++  +S A  +     + +DM KAGI PD+  ++ L  G  +AG+ ++A  +L
Sbjct: 301 TVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELL 360

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M +    P+VV ++ +++G C   K+  A  + E M E G  PNL T+ T++ G+ +A
Sbjct: 361 EVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKA 420

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL---------KSAEED 444
            +     ++L++M+E    P   T   + D +      ++A  +L          S  E 
Sbjct: 421 GKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEG 480

Query: 445 RQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSEHNGSSAAKIRSQIVLRSDTVW 504
             S    ++   V  +  KQ    ++S +  I G +     G  A K+   +  R     
Sbjct: 481 LCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPN 540

Query: 505 TATKSLFVN 513
             T S+ +N
Sbjct: 541 LYTYSILIN 549



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 188/379 (49%), Gaps = 7/379 (1%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  +   ++     PT+ITYTTL+   +R  R      ++  + K G+ PD + +N
Sbjct: 282 KMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYN 341

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +++   ++G ++EA ++ + M +  C P   TY+ L+ G   +GK +++  LL++M + 
Sbjct: 342 CLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLE- 400

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           +  +PN  T+N ++  +C    ++E   V+  M      PD VTY+TL   Y +      
Sbjct: 401 RGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQD 460

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  +L       + P++ +   ++ G C  G +E+A   +  M +    P    +  +I 
Sbjct: 461 AFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIG 514

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G  D++  D   K L +M E G +P++ T+S +++       +     + D M++ G  P
Sbjct: 515 GLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVP 574

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D+  ++ L  G+ +  +   A     +MR  G  P+ + +  +ISG+C +  +++A+ + 
Sbjct: 575 DVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVM 634

Query: 369 EKMCEIGINPNLKTYETLL 387
           + M E G NP+  TY +L+
Sbjct: 635 QLMLEKGCNPDAATYFSLM 653



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 150/318 (47%), Gaps = 7/318 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   GK  EAH +   ++E+   P ++TY+ LV  L +  +      L+  + + G 
Sbjct: 344 LDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGC 403

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ + FN MI+   ++G VDE  K+ + MK+  C P   TY+TLI GY    + +++  
Sbjct: 404 QPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFA 463

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L        + P+  +Y+ ++   CS   +EEA  V+  M   G  P +  Y  +    
Sbjct: 464 IL-------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGL 516

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                   A +ML  M      PN  T  I+++G CK   +EDA+  L  M E    P++
Sbjct: 517 CDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDV 576

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             + SLI GF  I   D   +    M + G +PD + ++ ++  +  +G + K  E+   
Sbjct: 577 ATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQL 636

Query: 301 MVKAGIEPDIHVFSILAK 318
           M++ G  PD   +  L +
Sbjct: 637 MLEKGCNPDAATYFSLMR 654



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 92/176 (52%), Gaps = 1/176 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK  EA  + + + ++G  PT   Y  ++  L   +R    L ++  + + G +P+
Sbjct: 481 LCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPN 540

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              ++ +IN   ++  V++A+ +   M + GC P  +TY +LI G+  + K + + +  +
Sbjct: 541 LYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFK 600

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            M +D   +P+   YNIL+  +C   ++E+A  V+  M+  G  PDA TY +L R+
Sbjct: 601 TM-RDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRS 655


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 223/436 (51%), Gaps = 8/436 (1%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F  +   G  P+ +TY  ++ A  ++   +    LI K+ +DG  PD + +N ++
Sbjct: 63  DARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVM 122

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   +S  V+EA+ +F +M+  GC P   ++NT+I G     K +++ ++   M + K++
Sbjct: 123 DGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM-EAKDI 181

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  +Y IL+        + EA+ +  +M+ SGI P AVTYN +            A +
Sbjct: 182 PPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALE 241

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +   M++   RP+  T  I++  +CK G +++A R L RM +    P++V +++LI G  
Sbjct: 242 LFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLC 301

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
            I   D     L  M +   KP VVT +T++     AG + + +E+ D MV +G  PD+ 
Sbjct: 302 SIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 361

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++ L  G+ RAG+ ++A  +L+ M   G+ PNVV +T ++SG C A ++  A  ++ +M
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM 421

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA-------DS 424
              G  PNL TY  L+ G+  A Q     +L   M   G+ P       +A        S
Sbjct: 422 KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRS 481

Query: 425 WRAIGLAREAKRVLKS 440
            RA+ + RE +  L+S
Sbjct: 482 ARALEILREGRESLRS 497



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 184/367 (50%), Gaps = 1/367 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L    +  EA  +FN +   G  P   ++ T++  L +Q +      +  ++E   +
Sbjct: 122 MDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDI 181

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PDS  +  +I+  +++G ++EA K+FQ+M DSG  P+  TYN +I G       +E+L+
Sbjct: 182 PPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALE 241

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M + K  +P+  T+NIL+ A C +  ++EA+ ++ +M   G  PD VTY+TL    
Sbjct: 242 LFKSM-RSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                   A  +L +M   Q +P   T   ++ G CK G +++A   L  M      P++
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+L+ G      ++   + L+ M   G+ P+VVT++ ++     A  + +   +F  
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M  +G  P++  ++ L  G+  AG+      +   M   G+ P+ V++ T+ +  C + +
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR 480

Query: 361 MQRAMSI 367
             RA+ I
Sbjct: 481 SARALEI 487



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 182/375 (48%), Gaps = 7/375 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK +EA+ +F  +++ G  P+ +TY  ++  +         L L   +   G +P 
Sbjct: 195 LAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPS 254

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              FN +I+A  + G +DEA ++ ++M D G  P   TY+TLI G  ++ + +++  LL+
Sbjct: 255 RFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 314

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + +  KP   T N L+   C    I+EA  V+  MV+SG  PD VTYNTL   + + 
Sbjct: 315 DMVK-RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRA 373

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+T RA ++L +M    + PN  T   +VSG CK   + +A     +MK     PNL  +
Sbjct: 374 GQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTY 433

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF----D 299
            +LI GF      DG  K    M   G+ PD V + T+      +G   +  EI     +
Sbjct: 434 TALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRE 493

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            +       +++ F++   G + AG+ + A   +  M + G  P      ++++G C + 
Sbjct: 494 SLRSEAWGDEVYRFAV--DGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSG 551

Query: 360 KMQRAMSIYEKMCEI 374
           +   A ++ E++ ++
Sbjct: 552 QGGEARAVLEEIMDL 566



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 154/358 (43%), Gaps = 1/358 (0%)

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M +    P + +Y  LI G    GK  ++  L Q +     V P+   Y  L+   C  N
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLH-SGVTPSTVAYTSLIHGLCMAN 59

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
           S ++A  +   M   G  P  VTYN +  A  + G    A  ++ +M  +   P+  T  
Sbjct: 60  SFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYN 119

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            ++ G CK   +E+A+     M+ L   PN    N++I G       D   +    ME  
Sbjct: 120 TVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAK 179

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
            + PD  ++  ++D  + AG + +  ++F  M+ +GI P    ++++  G   A    +A
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEA 239

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             +  SMR  G  P+   F  +I   C   K+  A  + ++M + G  P++ TY TL+ G
Sbjct: 240 LELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISG 299

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS 447
                +   A  LL+ M ++  +P   T   +       G  +EA+ VL +     QS
Sbjct: 300 LCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS 357


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 247/440 (56%), Gaps = 1/440 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   +A+  ++ +++ G  P ++TY++++AAL + +     + +++ + K+G+
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + +N++++    SG   EA+   +KM+  G +P   TY++L+      G+  E+ K
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M++ + ++P+  TY  L++ + +K ++ E   ++  MV +GIQPD   +N L  AY
Sbjct: 328 IFDSMTK-RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAY 386

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+  +  +A  +  +M+ + + PN    G ++   CK G+++DAM +  +M +  + PN+
Sbjct: 387 AKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNI 446

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +V+ SLI G       D  ++ +  M + G+  + + F++I+D+    G + + +++FD 
Sbjct: 447 IVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 506

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ G++PDI  ++ L  G   AG+  +A  +L SM   GV P++V + T+I+G+C   +
Sbjct: 507 MVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSR 566

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M  A++++++M   G++PN+ TY  +L G    ++   A+EL   + + G + + ST  +
Sbjct: 567 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNI 626

Query: 421 VADSWRAIGLAREAKRVLKS 440
           +        L  EA R+ ++
Sbjct: 627 ILHGLCKNNLTDEALRMFQN 646



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 209/388 (53%), Gaps = 3/388 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT+ TY  L+    R  R     + +  V K G + D+I F  ++          +AM I
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 87  -FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN--VKPNDRTYNILVR 143
             ++M + GC P   +YN L+KG  +  + +E+L+LL +M+ D+     P+  +YN ++ 
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +  +   ++A++  ++M+  GI PD VTY+++  A  +     +A ++L  M  N V P
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   I+ GYC  G  ++A+  L +M+   V PN+V ++SL+        S    K  
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M + G++PD+ T+ T++  +++ G + +   + D MV+ GI+PD HVF+IL   Y + 
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQ 389

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
            +  +A  + + MR++G++PNVV + TVI   C +  +  AM  +E+M + G+ PN+  Y
Sbjct: 390 EKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVY 449

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGV 411
            +L+ G     +  +AEEL+  M ++G+
Sbjct: 450 TSLIHGLCTCDKWDKAEELILEMLDRGI 477



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 117/528 (22%), Positives = 234/528 (44%), Gaps = 41/528 (7%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  + N +++ G  P  +TY +++       + K  +  + K+  DG++P+ + +++++
Sbjct: 254 KAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLM 313

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N   ++G   EA KIF  M   G +P  +TY TL++GY   G   E   LL LM ++  +
Sbjct: 314 NYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRN-GI 372

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY---- 187
           +P+   +NIL+ A+  +  +++A  V  KM   G+ P+ V Y T+     + G       
Sbjct: 373 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 432

Query: 188 -------------------------------RAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
                                          +AE+++ EM +  +  N      I+  +C
Sbjct: 433 YFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHC 492

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           KEG + ++ +    M  + V P+++ +N+LI G       D   K L  M   GVKPD+V
Sbjct: 493 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV 552

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T+ T+++ +     M     +F +MV +G+ P+I  ++I+ +G         A+ +  S+
Sbjct: 553 TYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI 612

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
            K G    +  +  ++ G C       A+ +++ +C   +    +T+  ++    +  + 
Sbjct: 613 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRM 672

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIA 456
             A++L       G+ P   T  L+A++    G   E   +  S EE+  S  ++     
Sbjct: 673 DEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSI 732

Query: 457 VESIHRKQNLSASNSTFLQIPGVVSSEHNGSSAAKIRSQIVLRSDTVW 504
           V  + ++ +++ + +    I      E + S  A   S ++  S  VW
Sbjct: 733 VRKLLQRGDITRAGTYLFMI-----DEKHFSLEASTASFLLESSPIVW 775



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 146/299 (48%), Gaps = 4/299 (1%)

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA- 189
           V P   TY IL+   C    ++  +  +  +V  G + DA+T+  L +       T  A 
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE---VHPNLVVFNSL 246
           + +L  M      P+  +   ++ G C E   ++A+  L+ M +       P++V +N++
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + GF    DSD        M + G+ PDVVT+S+I+ A   A  M K  E+ + MVK G+
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD   ++ +  GY  +G+P++A   L  MR  GV PNVV ++++++  C   +   A  
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           I++ M + G+ P++ TY TLL GY           LL +M   G++P      ++  ++
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAY 386



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 11/274 (4%)

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           V  ++ A A ++Y    RA          +V P   T  I++   C+ G ++     L  
Sbjct: 65  VARHSPAAAVSRYNRMARAGA-------GKVTPTVHTYAILIGCCCRAGRLDLGFAALGN 117

Query: 231 MKELEVHPNLVVFNSLIKGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
           + +     + + F  L+KG   D + SD +D  L  M E G  PDV +++ ++       
Sbjct: 118 VVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDEN 177

Query: 290 LMGKCQEIFDDMVK---AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
              +  E+   M      G  PD+  ++ +  G+ + G+  KA S    M   G+ P+VV
Sbjct: 178 RSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVV 237

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            ++++I+  C A  M +AM +   M + G+ P+  TY ++L GY  + QP  A   L+ M
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM 297

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
              GV P   T   + +     G + EA+++  S
Sbjct: 298 RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDS 331


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 247/440 (56%), Gaps = 1/440 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   +A+  ++ +++ G  P ++TY++++AAL + +     + +++ + K+G+
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + +N++++    SG   EA+   +KM+  G +P   TY++L+      G+  E+ K
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M++ + ++P+  TY  L++ + +K ++ E   ++  MV +GIQPD   +N L  AY
Sbjct: 328 IFDSMTK-RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAY 386

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+  +  +A  +  +M+ + + PN    G ++   CK G+++DAM +  +M +  + PN+
Sbjct: 387 AKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNI 446

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +V+ SLI G       D  ++ +  M + G+  + + F++I+D+    G + + +++FD 
Sbjct: 447 IVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 506

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ G++PDI  ++ L  G   AG+  +A  +L SM   GV P++V + T+I+G+C   +
Sbjct: 507 MVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSR 566

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M  A++++++M   G++PN+ TY  +L G    ++   A+EL   + + G + + ST  +
Sbjct: 567 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNI 626

Query: 421 VADSWRAIGLAREAKRVLKS 440
           +        L  EA R+ ++
Sbjct: 627 ILHGLCKNNLTDEALRMFQN 646



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 209/388 (53%), Gaps = 3/388 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT+ TY  L+    R  R     + +  V K G + D+I F  ++          +AM I
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 87  -FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN--VKPNDRTYNILVR 143
             ++M + GC P   +YN L+KG  +  + +E+L+LL +M+ D+     P+  +YN ++ 
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +  +   ++A++  ++M+  GI PD VTY+++  A  +     +A ++L  M  N V P
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   I+ GYC  G  ++A+  L +M+   V PN+V ++SL+        S    K  
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M + G++PD+ T+ T++  +++ G + +   + D MV+ GI+PD HVF+IL   Y + 
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQ 389

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
            +  +A  + + MR++G++PNVV + TVI   C +  +  AM  +E+M + G+ PN+  Y
Sbjct: 390 EKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVY 449

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGV 411
            +L+ G     +  +AEEL+  M ++G+
Sbjct: 450 TSLIHGLCTCDKWDKAEELILEMLDRGI 477



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 117/528 (22%), Positives = 234/528 (44%), Gaps = 41/528 (7%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  + N +++ G  P  +TY +++       + K  +  + K+  DG++P+ + +++++
Sbjct: 254 KAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLM 313

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N   ++G   EA KIF  M   G +P  +TY TL++GY   G   E   LL LM ++  +
Sbjct: 314 NYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRN-GI 372

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY---- 187
           +P+   +NIL+ A+  +  +++A  V  KM   G+ P+ V Y T+     + G       
Sbjct: 373 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 432

Query: 188 -------------------------------RAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
                                          +AE+++ EM +  +  N      I+  +C
Sbjct: 433 YFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHC 492

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           KEG + ++ +    M  + V P+++ +N+LI G       D   K L  M   GVKPD+V
Sbjct: 493 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV 552

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T+ T+++ +     M     +F +MV +G+ P+I  ++I+ +G         A+ +  S+
Sbjct: 553 TYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI 612

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
            K G    +  +  ++ G C       A+ +++ +C   +    +T+  ++    +  + 
Sbjct: 613 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRM 672

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIA 456
             A++L       G+ P   T  L+A++    G   E   +  S EE+  S  ++     
Sbjct: 673 DEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSI 732

Query: 457 VESIHRKQNLSASNSTFLQIPGVVSSEHNGSSAAKIRSQIVLRSDTVW 504
           V  + ++ +++ + +    I      E + S  A   S ++  S  VW
Sbjct: 733 VRKLLQRGDITRAGTYLFMI-----DEKHFSLEASTASFLLESSPIVW 775



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 146/299 (48%), Gaps = 4/299 (1%)

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA- 189
           V P   TY IL+   C    ++  +  +  +V  G + DA+T+  L +       T  A 
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE---VHPNLVVFNSL 246
           + +L  M      P+  +   ++ G C E   ++A+  L+ M +       P++V +N++
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + GF    DSD        M + G+ PDVVT+S+I+ A   A  M K  E+ + MVK G+
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD   ++ +  GY  +G+P++A   L  MR  GV PNVV ++++++  C   +   A  
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           I++ M + G+ P++ TY TLL GY           LL +M   G++P      ++  ++
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAY 386



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 11/274 (4%)

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           V  ++ A A ++Y    RA          +V P   T  I++   C+ G ++     L  
Sbjct: 65  VARHSPAAAVSRYNRMARAGA-------GKVTPTVHTYAILIGCCCRAGRLDLGFAALGN 117

Query: 231 MKELEVHPNLVVFNSLIKGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
           + +     + + F  L+KG   D + SD +D  L  M E G  PDV +++ ++       
Sbjct: 118 VVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDEN 177

Query: 290 LMGKCQEIFDDMVK---AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
              +  E+   M      G  PD+  ++ +  G+ + G+  KA S    M   G+ P+VV
Sbjct: 178 RSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVV 237

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            ++++I+  C A  M +AM +   M + G+ P+  TY ++L GY  + QP  A   L+ M
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM 297

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
              GV P   T   + +     G + EA+++  S
Sbjct: 298 RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDS 331


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 230/443 (51%), Gaps = 1/443 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EA  +F  L      P +++Y+ L+ +L R  ++++ L ++++++  G 
Sbjct: 16  LNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGC 75

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP+   +N +++   ++G  DEA+++  +M+D+GC P   TYN LI   G  G+  E+  
Sbjct: 76  KPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFT 135

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M +++   P+  TYN L+         ++A  ++ +M   G  PD +TY++L    
Sbjct: 136 LFAEM-RERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGL 194

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + GET +A ++  EM+    +P+  T   ++    K G ++DA+  L  MKE  V P +
Sbjct: 195 GKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGV 254

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+LI GF  + D       L  M+  G KPDVVT+S ++     A  + +  ++   
Sbjct: 255 VTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKK 314

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M K G  PD   ++ L  G  +AG    A  +   M+  G +P+VV ++T+I+    A +
Sbjct: 315 MEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAAR 374

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           ++ A  ++E+M  +GI P+L TY +++   G+A Q   A+ L   M  KG+ P   T   
Sbjct: 375 VESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNA 434

Query: 421 VADSWRAIGLAREAKRVLKSAEE 443
             +S    G  +EA+++ +  +E
Sbjct: 435 FLNSLGRGGRFKEARKIFEDMKE 457



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 213/417 (51%), Gaps = 1/417 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK   A  +   +  +G +P L TY TLV  L +  +F   L L++++  +G 
Sbjct: 51  INSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGC 110

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +N +I+   ++G + EA  +F +M++ GC P T TYN+LI G G VG+ +++++
Sbjct: 111 VPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAME 170

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M +     P+  TY+ L+          +A+ +  +M   G +PD++T+  L  A 
Sbjct: 171 LLEEMER-HGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDAL 229

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A ++L EM+   V+P   T   +++G+ K G++ +A   L  MK     P++
Sbjct: 230 GKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDV 289

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V ++ LI G +     D   + L  ME+ G  PD +T++T+++    AGL+     +FD 
Sbjct: 290 VTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDR 349

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G  PD+  +S L     +A   + A  +   M   G+ P++  + ++I+    A +
Sbjct: 350 MKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQ 409

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           +  A  ++ +M   G++P++ TY   L   G   +   A ++ + M+E G+ P  +T
Sbjct: 410 VDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVAT 466



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 203/440 (46%), Gaps = 36/440 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A  +   +   G  P ++TY++L+  L +         L  ++++ G KPDSI F
Sbjct: 163 GRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITF 222

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            A+++A  ++G VD+A+++  +MK+ G KP   TYN LI G+G VG   E+  LL  M +
Sbjct: 223 TALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKR 282

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +   KP+  TY+ L+      + ++EA  V+ KM   G  PD +TYNTL     + G   
Sbjct: 283 N-GCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLN 341

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++   M++    P+  T   +++   K   +E A      M+ + + P+L  + S+I
Sbjct: 342 DAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSII 401

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
                    D  D+  + M   G+ PDV+T++  +++    G   + ++IF+DM ++G+ 
Sbjct: 402 TVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLL 461

Query: 308 PDIHVFSILAKGYVRA-----------------------------------GEPQKAESI 332
           PD+  +  L  G  +                                    G   +A  +
Sbjct: 462 PDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHEL 521

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           L      G+ P    +  +I     A ++  A +  E + E G  P++ +Y +L+   G+
Sbjct: 522 LQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQ 581

Query: 393 AKQPWRAEELLQVMEEKGVR 412
             Q   A ELL+ M ++G++
Sbjct: 582 TGQIDTAFELLEEMSKRGLK 601



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 197/397 (49%), Gaps = 12/397 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   G+  +A  + + + E G +P ++TY  L+A   +        +L+ +++++G 
Sbjct: 226 MDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGC 285

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD + ++ +I    ++  +DEA ++ +KM+  GC P T TYNTLI G G  G   ++ +
Sbjct: 286 KPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGR 345

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M + K   P+  TY+ L+ A      +E A  +  +M + GIQPD  TY ++    
Sbjct: 346 LFDRM-KSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVL 404

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A+++  EM+   + P+  T    ++   + G  ++A +    MKE  + P++
Sbjct: 405 GKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDV 464

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             +++L+ G    K+   VD A  L++E    G   D + F   ++  +S G + +  E+
Sbjct: 465 ATYDALLLGLSKTKE---VDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHEL 521

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
                  G+ P    ++ L     +AG   +A + L  +++ G  P++V ++++IS    
Sbjct: 522 LQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQ 581

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLL-----WG 389
             ++  A  + E+M + G+  + ++Y  L+     WG
Sbjct: 582 TGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 6/315 (1%)

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           PN  TYN L+ A       EEA  +  ++ A+   PD V+Y+ L  +  + G+   A ++
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           + EMQ    +PN  T   +V    K G  ++A+R L  M++    P++  +N LI     
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLIS---T 123

Query: 253 IKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
           +  +  + +A TL   M E G  PD  T+++++      G   K  E+ ++M + G  PD
Sbjct: 124 LGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPD 183

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
           +  +S L  G  + GE  KA  +   M++ G  P+ + FT ++     A ++  A+ + +
Sbjct: 184 VMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLD 243

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           +M E G+ P + TY  L+ G+G+      A  LL  M+  G +P   T   +        
Sbjct: 244 EMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKAS 303

Query: 430 LAREAKRVLKSAEED 444
              EA +VLK  E++
Sbjct: 304 QLDEACQVLKKMEKE 318


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 241/440 (54%), Gaps = 1/440 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   +A+  ++ +++ G  P ++TY++++AAL + +     + +++ + K+G+
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   +N++++    SG   EA+   +KM   G +P   TYN+L+      G+  E+ K
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M++ + +KP   TY  L++ + +K ++ E   ++  MV +GI P+   ++ L  AY
Sbjct: 326 MFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+ G+  +A  +  +M+   + P+  T G ++   CK G +EDAMR+  +M +  + P  
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +V+NSLI         D   + +  M + G+  D + F++I+D+    G + + +++FD 
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ G++PDI  +S L  GY  AG+  +A  +L SM   G+ P+ V + T+I+G+C   +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ A+ ++ +M   G++P++ TY  +L G  + ++   A+EL   + E G + + ST  +
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624

Query: 421 VADSWRAIGLAREAKRVLKS 440
           +        L  EA R+ ++
Sbjct: 625 ILHGLCKNNLTDEALRMFQN 644



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 211/412 (51%), Gaps = 5/412 (1%)

Query: 5   VGKGKPHEAHYIFNCLIEEGH---RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK 61
           V +  P  A   +N +   G     P L TY  L+ +     R     + +  V K G +
Sbjct: 64  VARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFR 123

Query: 62  PDSILFNAMINACSESGNVDEAMKI-FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            D+I F  ++          +AM I  ++M   GC P   +YN L+KG  +  + +E+L+
Sbjct: 124 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALE 183

Query: 121 LLQLMSQD-KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           LLQ+M  D  +  P+  +Y  ++  +  +  +++A+   ++M+  GI P+ VTY+++  A
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             +     +A ++L  M  N V PN RT   IV GYC  G  ++A+ FL +M    V P+
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +V +NSL+             K    M + G+KP++ T+ T++  +++ G + +   + D
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            MV+ GI P+ +VFSIL   Y + G+  +A  + + MR+ G++P+ V + TVI   C + 
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           +++ AM  +E+M +  ++P    Y +L+       +  +A+EL+  M ++G+
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 198/435 (45%), Gaps = 38/435 (8%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG--MKPDSILFNAMINACSESGNVD 81
           G  P + +Y  L+  L  + R +  L L+  +  DG    PD + +  +IN   + G++D
Sbjct: 157 GCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +A   + +M D G  P   TY+++I         ++++++L  M ++  V PN RTYN +
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN-GVMPNCRTYNSI 275

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           V  +CS    +EA   + KM + G++PD VTYN+L     + G    A +M   M    +
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           +P   T G ++ GY  +G + +    L  M    +HPN  VF+ LI  +      D    
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLM------------------------------ 291
             + M + G+ PD VT+ T++     +G +                              
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455

Query: 292 -----GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
                 K +E+  +M+  GI  D   F+ +   + + G   ++E +   M + GV P+++
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            ++T+I G+C A KM  A  +   M  +G+ P+  TY TL+ GY +  +   A  L + M
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575

Query: 407 EEKGVRPKKSTIQLV 421
           E  GV P   T  ++
Sbjct: 576 ESSGVSPDIITYNII 590



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/468 (22%), Positives = 213/468 (45%), Gaps = 36/468 (7%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +   +++ G  P   TY ++V       + K  +  + K+  DG++PD + +N+++
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   ++G   EA K+F  M   G KP  +TY TL++GY   G   E   LL LM ++  +
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GI 370

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY------------------ 173
            PN   ++IL+ A+  +  +++A  V  KM   G+ PD VTY                  
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 174 -----------------NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
                            N+L  +   + +  +A++++ EM +  +  +      I+  +C
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           KEG + ++ +    M  + V P+++ +++LI G+      D   K L  M   G+KPD V
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T++T+++ +     M     +F +M  +G+ PDI  ++I+ +G  +      A+ +   +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
            + G    +  +  ++ G C       A+ +++ +C   +    +T+  ++    +  + 
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
             A++L   +   G+ P   T  L+A++    GL  E   +  S EE+
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEEN 718



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/413 (23%), Positives = 202/413 (48%), Gaps = 7/413 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   G+  EA  +F+ + + G +P + TY TL+     +     +  L+  + ++G+
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+  +F+ +I A ++ G VD+AM +F KM+  G  P T TY T+I      G+ E++++
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             + M  D+ + P +  YN L+ + C  +  ++A  ++ +M+  GI  D + +N++  ++
Sbjct: 431 YFEQMI-DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSH 489

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    +E++   M    V+P+  T   ++ GYC  G M++A + L  M  + + P+ 
Sbjct: 490 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDC 549

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +N+LI G+  I     ++ AL L   ME  GV PD++T++ I+            +E+
Sbjct: 550 VTYNTLINGYCKISR---MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           +  + ++G + ++  ++I+  G  +     +A  +  ++    +      F  +I     
Sbjct: 607 YVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 666

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
             +   A  ++  +   G+ P+++TY  +     E       ++L   MEE G
Sbjct: 667 VGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 144/311 (46%), Gaps = 3/311 (0%)

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA- 189
           V PN  TY IL+ + C    ++  +  +  ++  G + DA+ +  L +       T  A 
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL--EVHPNLVVFNSLI 247
           + +L  M      PN  +  I++ G C E   ++A+  L  M +   +  P++V + ++I
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            GF    D D        M + G+ P+VVT+S+I+ A   A  M K  E+   MVK G+ 
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P+   ++ +  GY  +G+P++A   L  M   GV P+VV + +++   C   +   A  +
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           ++ M + G+ P + TY TLL GY           LL +M   G+ P      ++  ++  
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 428 IGLAREAKRVL 438
            G   +A  V 
Sbjct: 387 QGKVDQAMLVF 397



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 10/273 (3%)

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           V  ++ A A ++Y    RA         ++V PN  T GI++   C  G ++     L  
Sbjct: 64  VARHSPAAAVSRYNRMARAGA-------DEVTPNLCTYGILIGSCCCAGRLDLGFAALGN 116

Query: 231 MKELEVHPNLVVFNSLIKGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
           + +     + + F  L+KG   D + SD +D  L  M + G  P+V +++ ++       
Sbjct: 117 VIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDEN 176

Query: 290 LMGKCQEIFDDMVKAGIE--PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
              +  E+   M   G +  PD+  ++ +  G+ + G+  KA      M   G+ PNVV 
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVT 236

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           ++++I+  C A  M +AM +   M + G+ PN +TY +++ GY  + QP  A   L+ M 
Sbjct: 237 YSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH 296

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
             GV P   T   + D     G   EA+++  S
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 140/300 (46%), Gaps = 6/300 (2%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  E+  +F+ ++  G +P +ITY+TL+       +      L++ +   GMKPD + 
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +IN   +   +++A+ +F++M+ SG  P   TYN +++G     +   + K L +  
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA-KELYVGI 610

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +   +    TYNI++   C  N  +EA  +   +  + +Q +  T+N +  A  + G  
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+ +   +  N + P+ RT  ++     ++G +E+       M+E     N  + NS+
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSI 730

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           ++  L   D       L +++E     +  T S  +D  S     GK QE +   ++ GI
Sbjct: 731 VRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSG----GKYQE-YHSCIRGGI 785


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 241/440 (54%), Gaps = 1/440 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   +A+  ++ +++ G  P ++TY++++AAL + +     + +++ + K+G+
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   +N++++    SG   EA+   +KM   G +P   TYN+L+      G+  E+ K
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M++ + +KP   TY  L++ + +K ++ E   ++  MV +GI P+   ++ L  AY
Sbjct: 326 MFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+ G+  +A  +  +M+   + P+  T G ++   CK G +EDAMR+  +M +  + P  
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +V+NSLI         D   + +  M + G+  D + F++I+D+    G + + +++FD 
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ G++PDI  +S L  GY  AG+  +A  +L SM   G+ P+ V + T+I+G+C   +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ A+ ++ +M   G++P++ TY  +L G  + ++   A+EL   + E G + + ST  +
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624

Query: 421 VADSWRAIGLAREAKRVLKS 440
           +        L  EA R+ ++
Sbjct: 625 ILHGLCKNNLTDEALRMFQN 644



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 203/387 (52%), Gaps = 2/387 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P L TY  L+ +     R     + +  V K G + D+I F  ++          +AM I
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 87  -FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD-KNVKPNDRTYNILVRA 144
             ++M   GC P   +YN L+KG  +  + +E+L+LLQ+M  D  +  P+  +Y  ++  
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +  +  +++A+   ++M+  GI P+ VTY+++  A  +     +A ++L  M  N V PN
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
            RT   IV GYC  G  ++A+ FL +M    V P++V +NSL+             K   
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M + G+KP++ T+ T++  +++ G + +   + D MV+ GI P+ +VFSIL   Y + G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           +  +A  + + MR+ G++P+ V + TVI   C + +++ AM  +E+M +  ++P    Y 
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGV 411
           +L+       +  +A+EL+  M ++G+
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGI 475



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 198/435 (45%), Gaps = 38/435 (8%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG--MKPDSILFNAMINACSESGNVD 81
           G  P + +Y  L+  L  + R +  L L+  +  DG    PD + +  +IN   + G++D
Sbjct: 157 GCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +A   + +M D G  P   TY+++I         ++++++L  M ++  V PN RTYN +
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN-GVMPNCRTYNSI 275

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           V  +CS    +EA   + KM + G++PD VTYN+L     + G    A +M   M    +
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           +P   T G ++ GY  +G + +    L  M    +HPN  VF+ LI  +      D    
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLM------------------------------ 291
             + M + G+ PD VT+ T++     +G +                              
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455

Query: 292 -----GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
                 K +E+  +M+  GI  D   F+ +   + + G   ++E +   M + GV P+++
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            ++T+I G+C A KM  A  +   M  +G+ P+  TY TL+ GY +  +   A  L + M
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575

Query: 407 EEKGVRPKKSTIQLV 421
           E  GV P   T  ++
Sbjct: 576 ESSGVSPDIITYNII 590



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/468 (22%), Positives = 213/468 (45%), Gaps = 36/468 (7%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +   +++ G  P   TY ++V       + K  +  + K+  DG++PD + +N+++
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   ++G   EA K+F  M   G KP  +TY TL++GY   G   E   LL LM ++  +
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GI 370

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY------------------ 173
            PN   ++IL+ A+  +  +++A  V  KM   G+ PD VTY                  
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 174 -----------------NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
                            N+L  +   + +  +A++++ EM +  +  +      I+  +C
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           KEG + ++ +    M  + V P+++ +++LI G+      D   K L  M   G+KPD V
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T++T+++ +     M     +F +M  +G+ PDI  ++I+ +G  +      A+ +   +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
            + G    +  +  ++ G C       A+ +++ +C   +    +T+  ++    +  + 
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
             A++L   +   G+ P   T  L+A++    GL  E   +  S EE+
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEEN 718



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/413 (23%), Positives = 202/413 (48%), Gaps = 7/413 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   G+  EA  +F+ + + G +P + TY TL+     +     +  L+  + ++G+
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+  +F+ +I A ++ G VD+AM +F KM+  G  P T TY T+I      G+ E++++
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             + M  D+ + P +  YN L+ + C  +  ++A  ++ +M+  GI  D + +N++  ++
Sbjct: 431 YFEQMI-DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSH 489

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    +E++   M    V+P+  T   ++ GYC  G M++A + L  M  + + P+ 
Sbjct: 490 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDC 549

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +N+LI G+  I     ++ AL L   ME  GV PD++T++ I+            +E+
Sbjct: 550 VTYNTLINGYCKISR---MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           +  + ++G + ++  ++I+  G  +     +A  +  ++    +      F  +I     
Sbjct: 607 YVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 666

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
             +   A  ++  +   G+ P+++TY  +     E       ++L   MEE G
Sbjct: 667 VGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 144/311 (46%), Gaps = 3/311 (0%)

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA- 189
           V PN  TY IL+ + C    ++  +  +  ++  G + DA+ +  L +       T  A 
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE--LEVHPNLVVFNSLI 247
           + +L  M      PN  +  I++ G C E   ++A+  L  M +   +  P++V + ++I
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            GF    D D        M + G+ P+VVT+S+I+ A   A  M K  E+   MVK G+ 
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P+   ++ +  GY  +G+P++A   L  M   GV P+VV + +++   C   +   A  +
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           ++ M + G+ P + TY TLL GY           LL +M   G+ P      ++  ++  
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 428 IGLAREAKRVL 438
            G   +A  V 
Sbjct: 387 QGKVDQAMLVF 397



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 10/273 (3%)

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           V  ++ A A ++Y    RA         ++V PN  T GI++   C  G ++     L  
Sbjct: 64  VARHSPAAAVSRYNRMARAGA-------DEVTPNLCTYGILIGSCCCAGRLDLGFAALGN 116

Query: 231 MKELEVHPNLVVFNSLIKGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
           + +     + + F  L+KG   D + SD +D  L  M + G  P+V +++ ++       
Sbjct: 117 VIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDEN 176

Query: 290 LMGKCQEIFDDMVKAGIE--PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
              +  E+   M   G +  PD+  ++ +  G+ + G+  KA      M   G+ PNVV 
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVT 236

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           ++++I+  C A  M +AM +   M + G+ PN +TY +++ GY  + QP  A   L+ M 
Sbjct: 237 YSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH 296

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
             GV P   T   + D     G   EA+++  S
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 140/300 (46%), Gaps = 6/300 (2%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  E+  +F+ ++  G +P +ITY+TL+       +      L++ +   GMKPD + 
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +IN   +   +++A+ +F++M+ SG  P   TYN +++G     +   + K L +  
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA-KELYVGI 610

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +   +    TYNI++   C  N  +EA  +   +  + +Q +  T+N +  A  + G  
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+ +   +  N + P+ RT  ++     ++G +E+       M+E     N  + NS+
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSI 730

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           ++  L   D       L +++E     +  T S  +D  S     GK QE +   ++ GI
Sbjct: 731 VRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSG----GKYQE-YHSCIRGGI 785


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 223/434 (51%), Gaps = 7/434 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EAH++   +  +G+ P +I+Y+T+V    R      +  LI  +++ G+KP+S ++
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            ++I        + EA + F +M   G  P T  Y TLI G+   G    + K    M  
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM-H 378

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            +++ P+  TY  ++  +C    + EA  + ++M   G++PD+VT+  L   Y + G   
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++   M      PN  T   ++ G CKEG+++ A   L+ M ++ + PN+  +NS++
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            G   +  S  +++A+ L+ EF   G+  D VT++T+MDA+  +G M K QEI  +M+  
Sbjct: 499 NG---LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G++P I  F++L  G+   G  +  E +L  M   G+ PN   F +++  +C    ++ A
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
            +IY+ MC  G+ P+ KTYE L+ G+ +A+    A  L Q M+ KG     ST  ++   
Sbjct: 616 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675

Query: 425 WRAIGLAREAKRVL 438
           +       EA+ V 
Sbjct: 676 FLKRKKFLEAREVF 689



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 186/356 (52%), Gaps = 1/356 (0%)

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+ +F++  + G     ++YN +I     +G+ +E+  LL LM + K   P+  +Y+ +V
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLM-ELKGYTPDVISYSTVV 288

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
             +C    +++ W ++  M   G++P++  Y ++     +  +   AE+   EM    + 
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+      ++ G+CK G++  A +F Y M   ++ P+++ + ++I GF  I D     K 
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              M   G++PD VTF+ +++ +  AG M     + + M++AG  P++  ++ L  G  +
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G+   A  +L  M K G+ PN+  + ++++G C +  ++ A+ +  +    G+N +  T
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           Y TL+  Y ++ +  +A+E+L+ M  KG++P   T  ++ + +   G+  + +++L
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 182/395 (46%), Gaps = 1/395 (0%)

Query: 45  FKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNT 104
           F     L+    KD    D  +F+       + G + EA ++F+KM + G   +  + N 
Sbjct: 157 FVQFFDLLVYTYKD-WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNV 215

Query: 105 LIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS 164
            +           +  ++     +  V  N  +YNI++   C    I+EA +++  M   
Sbjct: 216 YLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK 275

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           G  PD ++Y+T+   Y ++GE  +  +++  M+   ++PN    G I+   C+   + +A
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
                 M    + P+ VV+ +LI GF    D     K    M    + PDV+T++ I+  
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           +   G M +  ++F +M   G+EPD   F+ L  GY +AG  + A  +   M + G  PN
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
           VV +TT+I G C    +  A  +  +M +IG+ PN+ TY +++ G  ++     A +L+ 
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             E  G+     T   + D++   G   +A+ +LK
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 150/336 (44%), Gaps = 36/336 (10%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P ++TYT +++   +         L  ++   G++PDS+ F  +IN   ++G++ +A ++
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
              M  +GC P   TY TLI G    G  + + +LL  M +   ++PN  TYN +V   C
Sbjct: 444 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK-IGLQPNIFTYNSIVNGLC 502

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
              +IEEA  +V +  A+G+  D VTY TL  AY + GE  +A+++L EM    ++P   
Sbjct: 503 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 562

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T  ++++G+C  G +ED  + L  M    + PN   FNSL+K +    +          M
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622

Query: 267 EEFGVKPD-----------------------------------VVTFSTIMDAWSSAGLM 291
              GV PD                                   V T+S ++  +      
Sbjct: 623 CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKF 682

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
            + +E+FD M + G+  D  +F   +    +   P 
Sbjct: 683 LEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPD 718



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 133/304 (43%), Gaps = 40/304 (13%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G    A+ + + + + G +P + TY ++V  L +    +  + L+ + E  G+  D
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ +  +++A  +SG +D+A +I ++M   G +PT  T+N L+ G+   G  E+  KLL 
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K + PN  T+N LV+ +C +N+++ A  +   M + G+ PD  TY  L       
Sbjct: 586 WMLA-KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL------- 637

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                                       V G+CK  NM++A      MK      ++  +
Sbjct: 638 ----------------------------VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           + LIKGFL  K      +    M   G+  D      I D +S     GK  +   D + 
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQMRREGLAAD----KEIFDFFSDTKYKGKRPDTIVDPID 725

Query: 304 AGIE 307
             IE
Sbjct: 726 EIIE 729



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 1/197 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G   EA  +       G     +TYTTL+ A  +         ++ ++   G+
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P  + FN ++N     G +++  K+   M   G  P  +T+N+L+K Y      + +  
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M   + V P+ +TY  LV+  C   +++EAW +  +M   G      TY+ L + +
Sbjct: 618 IYKDMCS-RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676

Query: 181 AQYGETYRAEQMLFEMQ 197
            +  +   A ++  +M+
Sbjct: 677 LKRKKFLEAREVFDQMR 693


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 241/440 (54%), Gaps = 1/440 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   +A+  ++ +++ G  P ++TY++++AAL + +     + +++ + K+G+
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   +N++++    SG   EA+   +KM   G +P   TYN+L+      G+  E+ K
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M++ + +KP   TY  L++ + +K ++ E   ++  MV +GI P+   ++ L  AY
Sbjct: 326 MFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+ G+  +A  +  +M+   + P+  T G ++   CK G +EDAMR+  +M +  + P  
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +V+NSLI         D   + +  M + G+  D + F++I+D+    G + + +++FD 
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ G++PDI  +S L  GY  AG+  +A  +L SM   G+ P+ V + T+I+G+C   +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ A+ ++ +M   G++P++ TY  +L G  + ++   A+EL   + E G + + ST  +
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624

Query: 421 VADSWRAIGLAREAKRVLKS 440
           +        L  EA R+ ++
Sbjct: 625 ILHGLCKNNLTDEALRMFQN 644



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 203/387 (52%), Gaps = 2/387 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P L TY  L+ +     R     + +  V K G + D+I F  ++          +AM I
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 87  -FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD-KNVKPNDRTYNILVRA 144
             ++M   GC P   +YN L+KG  +  + +E+L+LLQ+M  D  +  P+  +Y  ++  
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +  +  +++A+   ++M+  GI P+ VTY+++  A  +     +A ++L  M  N V PN
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
            RT   IV GYC  G  ++A+ FL +M    V P++V +NSL+             K   
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M + G+KP++ T+ T++  +++ G + +   + D MV+ GI P+ +VFSIL   Y + G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           +  +A  + + MR+ G++P+ V + TVI   C + +++ AM  +E+M +  ++P    Y 
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGV 411
           +L+       +  +A+EL+  M ++G+
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGI 475



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 198/435 (45%), Gaps = 38/435 (8%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG--MKPDSILFNAMINACSESGNVD 81
           G  P + +Y  L+  L  + R +  L L+  +  DG    PD + +  +IN   + G++D
Sbjct: 157 GCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +A   + +M D G  P   TY+++I         ++++++L  M ++  V PN RTYN +
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN-GVMPNCRTYNSI 275

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           V  +CS    +EA   + KM + G++PD VTYN+L     + G    A +M   M    +
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           +P   T G ++ GY  +G + +    L  M    +HPN  VF+ LI  +      D    
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLM------------------------------ 291
             + M + G+ PD VT+ T++     +G +                              
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455

Query: 292 -----GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
                 K +E+  +M+  GI  D   F+ +   + + G   ++E +   M + GV P+++
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            ++T+I G+C A KM  A  +   M  +G+ P+  TY TL+ GY +  +   A  L + M
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575

Query: 407 EEKGVRPKKSTIQLV 421
           E  GV P   T  ++
Sbjct: 576 ESSGVSPDIITYNII 590



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 105/468 (22%), Positives = 213/468 (45%), Gaps = 36/468 (7%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +   +++ G  P   TY ++V       + K  +  + K+  DG++PD + +N+++
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   ++G   EA K+F  M   G KP  +TY TL++GY   G   E   LL LM ++  +
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GI 370

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY------------------ 173
            PN   ++IL+ A+  +  +++A  V  KM   G+ PD VTY                  
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 174 -----------------NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
                            N+L  +   + +  +A++++ EM +  +  +      I+  +C
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           KEG + ++ +    M  + V P+++ +++LI G+      D   K L  M   G+KPD V
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T++T+++ +     M     +F +M  +G+ PDI  ++I+ +G  +      A+ +   +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
            + G    +  +  ++ G C       A+ +++ +C   +    +T+  ++    +  + 
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
             A++L   +   G+ P   T  L+A++    GL  E   +  S EE+
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEEN 718



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/413 (23%), Positives = 202/413 (48%), Gaps = 7/413 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   G+  EA  +F+ + + G +P + TY TL+     +     +  L+  + ++G+
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+  +F+ +I A ++ G VD+AM +F KM+  G  P T TY T+I      G+ E++++
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             + M  D+ + P +  YN L+ + C  +  ++A  ++ +M+  GI  D + +N++  ++
Sbjct: 431 YFEQMI-DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSH 489

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    +E++   M    V+P+  T   ++ GYC  G M++A + L  M  + + P+ 
Sbjct: 490 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDC 549

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +N+LI G+  I     ++ AL L   ME  GV PD++T++ I+            +E+
Sbjct: 550 VTYNTLINGYCKISR---MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           +  + ++G + ++  ++I+  G  +     +A  +  ++    +      F  +I     
Sbjct: 607 YVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 666

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
             +   A  ++  +   G+ P+++TY  +     E       ++L   MEE G
Sbjct: 667 VGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 144/311 (46%), Gaps = 3/311 (0%)

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA- 189
           V PN  TY IL+ + C    ++  +  +  ++  G + DA+ +  L +       T  A 
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE--LEVHPNLVVFNSLI 247
           + +L  M      PN  +  I++ G C E   ++A+  L  M +   +  P++V + ++I
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            GF    D D        M + G+ P+VVT+S+I+ A   A  M K  E+   MVK G+ 
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P+   ++ +  GY  +G+P++A   L  M   GV P+VV + +++   C   +   A  +
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           ++ M + G+ P + TY TLL GY           LL +M   G+ P      ++  ++  
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 428 IGLAREAKRVL 438
            G   +A  V 
Sbjct: 387 QGKVDQAMLVF 397



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 10/273 (3%)

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           V  ++ A A ++Y    RA         ++V PN  T GI++   C  G ++     L  
Sbjct: 64  VARHSPAAAVSRYNRMARAGA-------DEVTPNLCTYGILIGSCCCAGRLDLGFAALGN 116

Query: 231 MKELEVHPNLVVFNSLIKGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
           + +     + + F  L+KG   D + SD +D  L  M + G  P+V +++ ++       
Sbjct: 117 VIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDEN 176

Query: 290 LMGKCQEIFDDMVKAGIE--PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
              +  E+   M   G +  PD+  ++ +  G+ + G+  KA      M   G+ PNVV 
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVT 236

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           ++++I+  C A  M +AM +   M + G+ PN +TY +++ GY  + QP  A   L+ M 
Sbjct: 237 YSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH 296

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
             GV P   T   + D     G   EA+++  S
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 135/290 (46%), Gaps = 5/290 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  E+  +F+ ++  G +P +ITY+TL+       +      L++ +   GMKPD + 
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +IN   +   +++A+ +F++M+ SG  P   TYN +++G     +   + K L +  
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA-KELYVGI 610

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +   +    TYNI++   C  N  +EA  +   +  + +Q +  T+N +  A  + G  
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+ +   +  N + P+ RT  ++     ++G +E+       M+E     N  + NS+
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSI 730

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           ++  L   D       L +++E     +  T S  +D  S     GK QE
Sbjct: 731 VRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSG----GKYQE 776


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 241/440 (54%), Gaps = 1/440 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   +A+  ++ +++ G  P ++TY++++AAL + +     + +++ + K+G+
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   +N++++    SG   EA+   +KM   G +P   TYN+L+      G+  E+ K
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M++ + +KP   TY  L++ + +K ++ E   ++  MV +GI P+   ++ L  AY
Sbjct: 326 MFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+ G+  +A  +  +M+   + P+  T G ++   CK G +EDAMR+  +M +  + P  
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +V+NSLI         D   + +  M + G+  D + F++I+D+    G + + +++FD 
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ G++PDI  +S L  GY  AG+  +A  +L SM   G+ P+ V + T+I+G+C   +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ A+ ++ +M   G++P++ TY  +L G  + ++   A+EL   + E G + + ST  +
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624

Query: 421 VADSWRAIGLAREAKRVLKS 440
           +        L  EA R+ ++
Sbjct: 625 ILHGLCKNNLTDEALRMFQN 644



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 202/387 (52%), Gaps = 2/387 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P L TY  L+ +     R     + +  V K G   D+I F  M+          +AM I
Sbjct: 89  PNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDI 148

Query: 87  -FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD-KNVKPNDRTYNILVRA 144
             ++M   GC P   +YN L+KG  +  + +E+L+LLQ+M  D  +  P+  +Y  ++  
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +  +  +++A+   ++M+  GI P+ VTY+++  A  +     +A ++L  M  N V PN
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
            RT   IV GYC  G  ++A+ FL +M    V P++V +NSL+             K   
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M + G+KP++ T+ T++  +++ G + +   + D MV+ GI P+ +VFSIL   Y + G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           +  +A  + + MR+ G++P+ V + TVI   C + +++ AM  +E+M +  ++P    Y 
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGV 411
           +L+       +  +A+EL+  M ++G+
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGI 475



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 197/435 (45%), Gaps = 38/435 (8%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG--MKPDSILFNAMINACSESGNVD 81
           G  P + +Y  L+  L    R +  L L+  +  DG    PD + +  +IN   + G++D
Sbjct: 157 GCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +A   + +M D G  P   TY+++I         ++++++L  M ++  V PN RTYN +
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN-GVMPNCRTYNSI 275

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           V  +CS    +EA   + KM + G++PD VTYN+L     + G    A +M   M    +
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           +P   T G ++ GY  +G + +    L  M    +HPN  VF+ LI  +      D    
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLM------------------------------ 291
             + M + G+ PD VT+ T++     +G +                              
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455

Query: 292 -----GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
                 K +E+  +M+  GI  D   F+ +   + + G   ++E +   M + GV P+++
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            ++T+I G+C A KM  A  +   M  +G+ P+  TY TL+ GY +  +   A  L + M
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575

Query: 407 EEKGVRPKKSTIQLV 421
           E  GV P   T  ++
Sbjct: 576 ESSGVSPDIITYNII 590



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 105/468 (22%), Positives = 213/468 (45%), Gaps = 36/468 (7%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +   +++ G  P   TY ++V       + K  +  + K+  DG++PD + +N+++
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   ++G   EA K+F  M   G KP  +TY TL++GY   G   E   LL LM ++  +
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GI 370

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY------------------ 173
            PN   ++IL+ A+  +  +++A  V  KM   G+ PD VTY                  
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 174 -----------------NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
                            N+L  +   + +  +A++++ EM +  +  +      I+  +C
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           KEG + ++ +    M  + V P+++ +++LI G+      D   K L  M   G+KPD V
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T++T+++ +     M     +F +M  +G+ PDI  ++I+ +G  +      A+ +   +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
            + G    +  +  ++ G C       A+ +++ +C   +    +T+  ++    +  + 
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
             A++L   +   G+ P   T  L+A++    GL  E   +  S EE+
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEEN 718



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/413 (23%), Positives = 202/413 (48%), Gaps = 7/413 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   G+  EA  +F+ + + G +P + TY TL+     +     +  L+  + ++G+
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+  +F+ +I A ++ G VD+AM +F KM+  G  P T TY T+I      G+ E++++
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             + M  D+ + P +  YN L+ + C  +  ++A  ++ +M+  GI  D + +N++  ++
Sbjct: 431 YFEQMI-DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSH 489

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    +E++   M    V+P+  T   ++ GYC  G M++A + L  M  + + P+ 
Sbjct: 490 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDC 549

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +N+LI G+  I     ++ AL L   ME  GV PD++T++ I+            +E+
Sbjct: 550 VTYNTLINGYCKISR---MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           +  + ++G + ++  ++I+  G  +     +A  +  ++    +      F  +I     
Sbjct: 607 YVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 666

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
             +   A  ++  +   G+ P+++TY  +     E       ++L   MEE G
Sbjct: 667 VGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 143/311 (45%), Gaps = 3/311 (0%)

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA- 189
           V PN  TY IL+ + C    ++  +  +  ++  G   DA+ +  + +       T  A 
Sbjct: 87  VTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAM 146

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE--LEVHPNLVVFNSLI 247
           + +L  M      PN  +  I++ G C +   ++A+  L  M +   +  P++V + ++I
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            GF    D D        M + G+ P+VVT+S+I+ A   A  M K  E+   MVK G+ 
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P+   ++ +  GY  +G+P++A   L  M   GV P+VV + +++   C   +   A  +
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           ++ M + G+ P + TY TLL GY           LL +M   G+ P      ++  ++  
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 428 IGLAREAKRVL 438
            G   +A  V 
Sbjct: 387 QGKVDQAMLVF 397



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 125/273 (45%), Gaps = 10/273 (3%)

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           V  ++ A A ++Y    RA         ++V PN  T GI++   C  G ++     L  
Sbjct: 64  VARHSPAAAVSRYNRMARAGA-------DEVTPNLCTYGILMGSCCCAGRLDLGFAALGN 116

Query: 231 MKELEVHPNLVVFNSLIKGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
           + +     + + F  ++KG   D + SD +D  L  M + G  P+V +++ ++       
Sbjct: 117 VIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDN 176

Query: 290 LMGKCQEIFDDMVKAGIE--PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
              +  E+   M   G +  PD+  ++ +  G+ + G+  KA      M   G+ PNVV 
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVT 236

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           ++++I+  C A  M +AM +   M + G+ PN +TY +++ GY  + QP  A   L+ M 
Sbjct: 237 YSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH 296

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
             GV P   T   + D     G   EA+++  S
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 135/290 (46%), Gaps = 5/290 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  E+  +F+ ++  G +P +ITY+TL+       +      L++ +   GMKPD + 
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +IN   +   +++A+ +F++M+ SG  P   TYN +++G     +   + K L +  
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA-KELYVGI 610

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +   +    TYNI++   C  N  +EA  +   +  + +Q +  T+N +  A  + G  
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+ +   +  N + P+ RT  ++     ++G +E+       M+E     N  + NS+
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSI 730

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           ++  L   D       L +++E     +  T S  +D  S     GK QE
Sbjct: 731 VRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSG----GKYQE 776


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 222/434 (51%), Gaps = 7/434 (1%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            G+  EAH++   +  +G+ P +I+Y+T+V    R      +  LI  +++ G+KP+S ++
Sbjct: 703  GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 762

Query: 68   NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             ++I        + EA + F +M   G  P T  Y TLI G+   G    + K    M  
Sbjct: 763  GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM-H 821

Query: 128  DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
             +++ P+  TY  ++  +C    + EA  + ++M   G++PD+VT+  L   Y + G   
Sbjct: 822  SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 881

Query: 188  RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
             A ++   M      PN  T   ++ G CKEG+++ A   L+ M ++ + PN+  +NS++
Sbjct: 882  DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 941

Query: 248  KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
             G      S  +++A+ L+ EF   G+  D VT++T+MDA+  +G M K QEI  +M+  
Sbjct: 942  NGLCK---SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 998

Query: 305  GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
            G++P I  F++L  G+   G  +  E +L  M   G+ PN   F +++  +C    ++ A
Sbjct: 999  GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 1058

Query: 365  MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             +IY+ MC  G+ P+ KTYE L+ G+ +A+    A  L Q M+ KG     ST  ++   
Sbjct: 1059 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 1118

Query: 425  WRAIGLAREAKRVL 438
            +       EA+ V 
Sbjct: 1119 FLKRKKFLEAREVF 1132



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 186/356 (52%), Gaps = 1/356 (0%)

Query: 83   AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
            A+ +F++  + G     ++YN +I     +G+ +E+  LL LM + K   P+  +Y+ +V
Sbjct: 673  AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLM-ELKGYTPDVISYSTVV 731

Query: 143  RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
              +C    +++ W ++  M   G++P++  Y ++     +  +   AE+   EM    + 
Sbjct: 732  NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 791

Query: 203  PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
            P+      ++ G+CK G++  A +F Y M   ++ P+++ + ++I GF  I D     K 
Sbjct: 792  PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 851

Query: 263  LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
               M   G++PD VTF+ +++ +  AG M     + + M++AG  P++  ++ L  G  +
Sbjct: 852  FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 911

Query: 323  AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
             G+   A  +L  M K G+ PN+  + ++++G C +  ++ A+ +  +    G+N +  T
Sbjct: 912  EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 971

Query: 383  YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            Y TL+  Y ++ +  +A+E+L+ M  KG++P   T  ++ + +   G+  + +++L
Sbjct: 972  YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 1027



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 177/377 (46%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D  +F+       + G + EA ++F+KM + G   +  + N  +           +  ++
Sbjct: 617 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 676

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
                +  V  N  +YNI++   C    I+EA +++  M   G  PD ++Y+T+   Y +
Sbjct: 677 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 736

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
           +GE  +  +++  M+   ++PN    G I+   C+   + +A      M    + P+ VV
Sbjct: 737 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 796

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           + +LI GF    D     K    M    + PDV+T++ I+  +   G M +  ++F +M 
Sbjct: 797 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 856

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G+EPD   F+ L  GY +AG  + A  +   M + G  PNVV +TT+I G C    + 
Sbjct: 857 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 916

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A  +  +M +IG+ PN+ TY +++ G  ++     A +L+   E  G+     T   + 
Sbjct: 917 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 976

Query: 423 DSWRAIGLAREAKRVLK 439
           D++   G   +A+ +LK
Sbjct: 977 DAYCKSGEMDKAQEILK 993



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 150/336 (44%), Gaps = 36/336 (10%)

Query: 27   PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
            P ++TYT +++   +         L  ++   G++PDS+ F  +IN   ++G++ +A ++
Sbjct: 827  PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 886

Query: 87   FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
               M  +GC P   TY TLI G    G  + + +LL  M +   ++PN  TYN +V   C
Sbjct: 887  HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK-IGLQPNIFTYNSIVNGLC 945

Query: 147  SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               +IEEA  +V +  A+G+  D VTY TL  AY + GE  +A+++L EM    ++P   
Sbjct: 946  KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 1005

Query: 207  TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
            T  ++++G+C  G +ED  + L  M    + PN   FNSL+K +    +          M
Sbjct: 1006 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 1065

Query: 267  EEFGVKPD-----------------------------------VVTFSTIMDAWSSAGLM 291
               GV PD                                   V T+S ++  +      
Sbjct: 1066 CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKF 1125

Query: 292  GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
             + +E+FD M + G+  D  +F   +    +   P 
Sbjct: 1126 LEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPD 1161



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 133/304 (43%), Gaps = 40/304 (13%)

Query: 4    LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            L  +G    A+ + + + + G +P + TY ++V  L +    +  + L+ + E  G+  D
Sbjct: 909  LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 968

Query: 64   SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            ++ +  +++A  +SG +D+A +I ++M   G +PT  T+N L+ G+   G  E+  KLL 
Sbjct: 969  TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 1028

Query: 124  LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
             M   K + PN  T+N LV+ +C +N+++ A  +   M + G+ PD  TY  L       
Sbjct: 1029 WMLA-KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL------- 1080

Query: 184  GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                                        V G+CK  NM++A      MK      ++  +
Sbjct: 1081 ----------------------------VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 1112

Query: 244  NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            + LIKGFL  K      +    M   G+  D      I D +S     GK  +   D + 
Sbjct: 1113 SVLIKGFLKRKKFLEAREVFDQMRREGLAAD----KEIFDFFSDTKYKGKRPDTIVDPID 1168

Query: 304  AGIE 307
              IE
Sbjct: 1169 EIIE 1172



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 1/197 (0%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            +N L   G   EA  +       G     +TYTTL+ A  +         ++ ++   G+
Sbjct: 941  VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 1000

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            +P  + FN ++N     G +++  K+   M   G  P  +T+N+L+K Y      + +  
Sbjct: 1001 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 1060

Query: 121  LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            + + M   + V P+ +TY  LV+  C   +++EAW +  +M   G      TY+ L + +
Sbjct: 1061 IYKDMCS-RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 1119

Query: 181  AQYGETYRAEQMLFEMQ 197
             +  +   A ++  +M+
Sbjct: 1120 LKRKKFLEAREVFDQMR 1136


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 210/386 (54%), Gaps = 4/386 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  +A  IF  + ++G +P + TYT+L++    Q+  +  + L  ++ +DG+ P+
Sbjct: 343 LCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRMSRDGVVPN 399

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ +NA++N   E+  +D A+ +F  M   GC P TS+YN LI+GY  +G  E+++ +L 
Sbjct: 400 TVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLT 459

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + +   P   TYNI+++ +C     + A  V+  M A+G QPD  +Y  L   + + 
Sbjct: 460 NMLKGRPT-PTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKI 518

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +   A  M  EM +  + PNE T   ++SGYCK+  ++ A R L RMK     PN+  +
Sbjct: 519 SKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTY 578

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N LI G     +  G ++   +M E  + PDVVT+ST+++   + G +    E+F+ MVK
Sbjct: 579 NVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVK 638

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G  P++H +S L +   + G  ++AE + + ++K G+ P+ V +  +I     + K+ R
Sbjct: 639 HGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDR 698

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWG 389
           A     +M   G  P L+TY+ L+ G
Sbjct: 699 AFDFLGEMINAGCQPTLQTYDVLIKG 724



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 198/405 (48%), Gaps = 4/405 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  IFN + EEG  P   TY+TL+  L    R    L  IS++ + G+ P    F A I 
Sbjct: 282 AFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIV 341

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
           A  + G +++A KIF  MK  GCKP   TY +LI G   V +   ++ L   MS+D  V 
Sbjct: 342 ALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQ-RVSR--MAIGLFHRMSRD-GVV 397

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           PN  TYN L+        I+ A  V   M   G  P+  +YN L R Y   G+T +A  M
Sbjct: 398 PNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSM 457

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           L  M   +  P   T  II+ GYC  G+ + A+R L  MK     P+   +  LI GF  
Sbjct: 458 LTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCK 517

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           I   +        M + G+ P+ VT++ ++  +     +     + + M ++G  P++  
Sbjct: 518 ISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQT 577

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           +++L  G  +      AE +   M +  + P+VV ++TVI+G CN   +  A+ ++ KM 
Sbjct: 578 YNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMV 637

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           + G  PNL TY +L+   G+  +   AEE+   ++++G+ P + T
Sbjct: 638 KHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVT 682



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 205/420 (48%), Gaps = 7/420 (1%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           ++ ++ EG +P L+ Y +++ AL +    +   S+I+KV K GMKPD+  + +MI     
Sbjct: 216 YHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCR 275

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
           + ++D A +IF +M + GC+P  +TY+TLI G  N G+  E+L  +  M++   V P   
Sbjct: 276 NRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTR-HGVLPTVH 334

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           T+   + A C    IE+AW +   M   G +P+  TY +L         +  A  +   M
Sbjct: 335 TFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRV---SRMAIGLFHRM 391

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
             + V PN  T   +++   +   ++ A+     M +    PN   +N LI+G+  I D+
Sbjct: 392 SRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDT 451

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           +     LT M +    P +VT++ I+  +  +G       + + M   G +PD   ++ L
Sbjct: 452 EKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTEL 511

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G+ +  + + A  +   M   G+ PN V +T +ISG+C   K+  A  + E+M   G 
Sbjct: 512 ISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGC 571

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW---RAIGLARE 433
            PN++TY  L+ G  +      AEEL +VM E+ + P   T   V +      AI LA E
Sbjct: 572 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALE 631



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 201/400 (50%), Gaps = 4/400 (1%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           + G +  L TYTTL+  L +     +++    ++ ++G++P+ +++N++INA  + GNV 
Sbjct: 186 QRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVR 245

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +A  I  K+  SG KP T TY ++I GY      + + ++   M ++   +PN  TY+ L
Sbjct: 246 DAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEE-GCEPNAATYSTL 304

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +   C+   + EA + + +M   G+ P   T+     A    G    A ++  +M+    
Sbjct: 305 INGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGC 364

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           +PN  T   ++SG  +   M  A+   +RM    V PN V +N+L+   ++  + D    
Sbjct: 365 KPNVYTYTSLISGQ-RVSRM--AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALI 421

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
              +M + G  P+  +++ ++  + + G   K   +  +M+K    P +  ++I+ KGY 
Sbjct: 422 VFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYC 481

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
            +G+   A  +L  M+  G  P+   +T +ISG+C   KM+ A  ++ +M + G+ PN  
Sbjct: 482 DSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEV 541

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           TY  L+ GY + ++   A  +L+ M+  G RP   T  ++
Sbjct: 542 TYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVL 581



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 89/421 (21%), Positives = 175/421 (41%), Gaps = 23/421 (5%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +P   +YT L++   +  + +    + +++   G+ P+ + + A+I+   +   +D A
Sbjct: 500 GCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCA 559

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            ++ ++MK SGC+P   TYN LI G         + +L ++M ++K + P+  TY+ ++ 
Sbjct: 560 ARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEK-ISPDVVTYSTVIN 618

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C+  +I  A  +  KMV  G  P+  TY++L +A  Q G    AE+M  E++   + P
Sbjct: 619 GLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIP 678

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD----------- 252
           +E T   ++      G ++ A  FL  M      P L  ++ LIKG  +           
Sbjct: 679 DEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALP 738

Query: 253 -----------IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
                      I + D +    + + E   +     +  ++   S +G   +   ++  M
Sbjct: 739 NAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSM 798

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           V     P+   +       +RA +   A  +   M       ++  +  +I   C   + 
Sbjct: 799 VSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRR 858

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           + A  ++EKM    +N +   +  L+ G   A       E L +ME     P      ++
Sbjct: 859 KEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFLHIMETNRRNPSSHARTIL 918

Query: 422 A 422
           A
Sbjct: 919 A 919



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 141/308 (45%), Gaps = 5/308 (1%)

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           ++++  +K  + +A N +      G +    TY TL     +   T        ++    
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           ++PN      +++  CK+GN+ DA   + ++ +  + P+   + S+I G+   +D D   
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           +    M+E G +P+  T+ST+++   ++G + +  +   +M + G+ P +H F+      
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVAL 343

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR-AMSIYEKMCEIGINPN 379
              G  + A  I   M+K G  PNV  +T++ISG     ++ R A+ ++ +M   G+ PN
Sbjct: 344 CDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQ----RVSRMAIGLFHRMSRDGVVPN 399

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             TY  L+    E  +   A  +  +M + G  P  S+   +   +  IG   +A  +L 
Sbjct: 400 TVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLT 459

Query: 440 SAEEDRQS 447
           +  + R +
Sbjct: 460 NMLKGRPT 467



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 132/320 (41%), Gaps = 18/320 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G    A  +FN +++ G  P L TY++L+ AL ++ R +    + S+++K G+
Sbjct: 617 INGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGL 676

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL- 119
            PD + +  MI  C  SG VD A     +M ++GC+PT  TY+ LIKG  N     E + 
Sbjct: 677 IPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQN-----EMVY 731

Query: 120 -KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
            KL+ L +       +D+  N  V +  S    E  + +  ++           Y+ L  
Sbjct: 732 HKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQL-----------YDALLS 780

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
             ++ G  + A  +   M +    PN+ T    +    +   ++ AM     M +     
Sbjct: 781 RLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCEL 840

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           +L  +  LI     +            M    +  D + ++ +++    AG    C E  
Sbjct: 841 HLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFL 900

Query: 299 DDMVKAGIEPDIHVFSILAK 318
             M      P  H  +ILA+
Sbjct: 901 HIMETNRRNPSSHARTILAR 920


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 222/440 (50%), Gaps = 7/440 (1%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            G+ +EAH++   +  +G+ P +I+Y+T++    R      +  LI K+++ G+KP+S  +
Sbjct: 683  GRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTY 742

Query: 68   NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             ++I        + EA + F +M   G  P T  Y TL+ G+   G    + K    M  
Sbjct: 743  GSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEM-H 801

Query: 128  DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
             +++ P+  TY  ++  +C    + EA  + ++M+  G++PD +T+  L   Y + G   
Sbjct: 802  SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIK 861

Query: 188  RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
             A ++   M      PN  T   ++ G CKEG+++ A   L+ M ++ + PN+  +NS++
Sbjct: 862  DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 921

Query: 248  KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
             G      S  +++A+ L+ EF   G+  D VT++T+MDA+  +G M K QEI  +M+  
Sbjct: 922  NGLCK---SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGK 978

Query: 305  GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
            G++P I  F++L  G+   G  +  E +L  M   G+ PN   F  ++  +C    ++ A
Sbjct: 979  GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAA 1038

Query: 365  MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             +IY+ MC  G+ P+ KTYE L+ G+  A+    A  L Q M+ KG     ST  ++   
Sbjct: 1039 TAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 1098

Query: 425  WRAIGLAREAKRVLKSAEED 444
            +       EA+ +      D
Sbjct: 1099 FFKRKKFVEAREIFDQMRRD 1118



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 186/400 (46%), Gaps = 1/400 (0%)

Query: 39  LTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPT 98
           L   + F     L+    KD    D  +F+       E G + EA K+F+KM + G   +
Sbjct: 574 LNVTESFVQFFDLLVYTYKD-WGSDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLS 632

Query: 99  TSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVV 158
             + N  +           +  ++     +  V  N  +YNI++   C    I EA +++
Sbjct: 633 VDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLL 692

Query: 159 YKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
             M   G  PD ++Y+T+   Y ++GE  +  +++ +M+   ++PN  T G I+   C+ 
Sbjct: 693 LLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRI 752

Query: 219 GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTF 278
             + +A      M    + P+ +V+ +L+ GF    D     K    M    + PDV+T+
Sbjct: 753 CKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 812

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           + I+  +   G M +  ++F +M+  G+EPDI  F+ L  GY +AG  + A  +   M +
Sbjct: 813 TAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQ 872

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            G  PNVV +TT+I G C    +  A  +  +M +IG+ PN+ TY +++ G  ++     
Sbjct: 873 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 932

Query: 399 AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           A +L+   E  G+     T   + D++   G   +A+ +L
Sbjct: 933 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 972



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 149/336 (44%), Gaps = 36/336 (10%)

Query: 27   PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
            P ++TYT +++   +         L  ++   G++PD I F  ++N   ++G++ +A ++
Sbjct: 807  PDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRV 866

Query: 87   FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
               M  +GC P   TY TLI G    G  + + +LL  M +   ++PN  TYN +V   C
Sbjct: 867  HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK-IGLQPNIFTYNSIVNGLC 925

Query: 147  SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               +IEEA  +V +  A+G+  D VTY TL  AY + GE  +A+++L EM    ++P   
Sbjct: 926  KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIV 985

Query: 207  TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
            T  ++++G+C  G +ED  + L  M    + PN   FN L+K +    +          M
Sbjct: 986  TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDM 1045

Query: 267  EEFGVKPD-----------------------------------VVTFSTIMDAWSSAGLM 291
               GV+PD                                   V T+S ++  +      
Sbjct: 1046 CSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKF 1105

Query: 292  GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
             + +EIFD M + G+  D  +F   +    +   P 
Sbjct: 1106 VEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPD 1141



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 150/307 (48%), Gaps = 5/307 (1%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            MN     G   +A  + N +I+ G  P ++TYTTL+  L ++    S   L+ ++ K G+
Sbjct: 851  MNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 910

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            +P+   +N+++N   +SGN++EA+K+  + + +G    T TY TL+  Y   G+ +++ +
Sbjct: 911  QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 970

Query: 121  LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            +L  M   K ++P   T+N+L+  +C    +E+   ++  M+A GI P+A T+N L + Y
Sbjct: 971  ILTEM-LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQY 1029

Query: 181  AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                    A  +  +M +  V P+ +T   +V G+C   NM++A      MK      ++
Sbjct: 1030 CIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSV 1089

Query: 241  VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
              ++ LIKGF   K      +    M   G+  D      I D +S     GK  +   D
Sbjct: 1090 STYSVLIKGFFKRKKFVEAREIFDQMRRDGLAAD----KEIFDFFSDTKYKGKRPDTIVD 1145

Query: 301  MVKAGIE 307
             +   IE
Sbjct: 1146 PIDEIIE 1152


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 240/440 (54%), Gaps = 1/440 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   +A+  ++ +++ G  P ++TY +++AAL + +     + +++ + K+G+
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   +N++++    SG   EA+   +KM   G +P   TYN+L+      G+  E+ K
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M++ + +KP   TY  L++ + +K ++ E   ++  MV +GI P+   ++ L  AY
Sbjct: 326 MFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+ G+  +A  +  +M+   + P+  T G ++   CK G +EDAMR+  +M +  + P  
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +V+NSLI         D   + +  M + G+  D + F++I+D+    G + + +++FD 
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ G++P+I  +S L  GY  AG+  +A  +L SM   G+ P+ V + T+I+G+C   +
Sbjct: 505 MVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ A+ ++ +M   G++P++ TY  +L G  + ++   A+EL   + E G + + ST  +
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624

Query: 421 VADSWRAIGLAREAKRVLKS 440
           +        L  EA R+ ++
Sbjct: 625 ILHGLCKNNLTDEALRMFQN 644



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 203/387 (52%), Gaps = 2/387 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P L TY  L+ +     R     + +  V K G + D+I F  ++          +AM I
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 87  -FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD-KNVKPNDRTYNILVRA 144
             ++M   GC P   +YN L+KG  +  + +E+L+LLQ+M  D  +  P+  +Y  ++  
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +  +  +++A+   ++M+  GI P+ VTYN++  A  +     +A ++L  M  N V PN
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
            RT   IV GYC  G  ++A+ FL +M    V P++V +NSL+             K   
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M + G+KP++ T+ T++  +++ G + +   + D MV+ GI P+ +VFSIL   Y + G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           +  +A  + + MR+ G++P+ V + TVI   C + +++ AM  +E+M +  ++P    Y 
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGV 411
           +L+       +  +A+EL+  M ++G+
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGI 475



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 198/435 (45%), Gaps = 38/435 (8%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG--MKPDSILFNAMINACSESGNVD 81
           G  P + +Y  L+  L  + R +  L L+  +  DG    PD + +  +IN   + G++D
Sbjct: 157 GCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +A   + +M D G  P   TYN++I         ++++++L  M ++  V PN RTYN +
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKN-GVMPNCRTYNSI 275

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           V  +CS    +EA   + KM + G++PD VTYN+L     + G    A +M   M    +
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           +P   T G ++ GY  +G + +    L  M    +HPN  VF+ LI  +      D    
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLM------------------------------ 291
             + M + G+ PD VT+ T++     +G +                              
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455

Query: 292 -----GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
                 K +E+  +M+  GI  D   F+ +   + + G   ++E +   M + GV PN++
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNII 515

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            ++T+I G+C A KM  A  +   M  +G+ P+  TY TL+ GY +  +   A  L + M
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575

Query: 407 EEKGVRPKKSTIQLV 421
           E  GV P   T  ++
Sbjct: 576 ESSGVSPDIITYNII 590



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/468 (22%), Positives = 213/468 (45%), Gaps = 36/468 (7%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +   +++ G  P   TY ++V       + K  +  + K+  DG++PD + +N+++
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   ++G   EA K+F  M   G KP  +TY TL++GY   G   E   LL LM ++  +
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GI 370

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY------------------ 173
            PN   ++IL+ A+  +  +++A  V  KM   G+ PD VTY                  
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 174 -----------------NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
                            N+L  +   + +  +A++++ EM +  +  +      I+  +C
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           KEG + ++ +    M  + V PN++ +++LI G+      D   K L  M   G+KPD V
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T++T+++ +     M     +F +M  +G+ PDI  ++I+ +G  +      A+ +   +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
            + G    +  +  ++ G C       A+ +++ +C   +    +T+  ++    +  + 
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
             A++L   +   G+ P   T  L+A++    GL  E   +  S EE+
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEEN 718



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/413 (23%), Positives = 202/413 (48%), Gaps = 7/413 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   G+  EA  +F+ + + G +P + TY TL+     +     +  L+  + ++G+
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+  +F+ +I A ++ G VD+AM +F KM+  G  P T TY T+I      G+ E++++
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             + M  D+ + P +  YN L+ + C  +  ++A  ++ +M+  GI  D + +N++  ++
Sbjct: 431 YFEQMI-DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSH 489

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    +E++   M    V+PN  T   ++ GYC  G M++A + L  M  + + P+ 
Sbjct: 490 CKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDC 549

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +N+LI G+  I     ++ AL L   ME  GV PD++T++ I+            +E+
Sbjct: 550 VTYNTLINGYCKISR---MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           +  + ++G + ++  ++I+  G  +     +A  +  ++    +      F  +I     
Sbjct: 607 YVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 666

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
             +   A  ++  +   G+ P+++TY  +     E       ++L   MEE G
Sbjct: 667 VGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 144/311 (46%), Gaps = 3/311 (0%)

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA- 189
           V PN  TY IL+ + C    ++  +  +  ++  G + DA+ +  L +       T  A 
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE--LEVHPNLVVFNSLI 247
           + +L  M      PN  +  I++ G C E   ++A+  L  M +   +  P++V + ++I
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            GF    D D        M + G+ P+VVT+++I+ A   A  M K  E+   MVK G+ 
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P+   ++ +  GY  +G+P++A   L  M   GV P+VV + +++   C   +   A  +
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           ++ M + G+ P + TY TLL GY           LL +M   G+ P      ++  ++  
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 428 IGLAREAKRVL 438
            G   +A  V 
Sbjct: 387 QGKVDQAMLVF 397



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 124/273 (45%), Gaps = 10/273 (3%)

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           V  ++ A A ++Y    RA         ++V PN  T GI++   C  G ++     L  
Sbjct: 64  VARHSPAAAVSRYNRMARAGA-------DEVTPNLCTYGILIGSCCCAGRLDLGFAALGN 116

Query: 231 MKELEVHPNLVVFNSLIKGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
           + +     + + F  L+KG   D + SD +D  L  M + G  P+V +++ ++       
Sbjct: 117 VIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDEN 176

Query: 290 LMGKCQEIFDDMVKAGIE--PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
              +  E+   M   G +  PD+  ++ +  G+ + G+  KA      M   G+ PNVV 
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVT 236

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           + ++I+  C A  M +AM +   M + G+ PN +TY +++ GY  + QP  A   L+ M 
Sbjct: 237 YNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH 296

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
             GV P   T   + D     G   EA+++  S
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 135/290 (46%), Gaps = 5/290 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  E+  +F+ ++  G +P +ITY+TL+       +      L++ +   GMKPD + 
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +IN   +   +++A+ +F++M+ SG  P   TYN +++G     +   + K L +  
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA-KELYVGI 610

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +   +    TYNI++   C  N  +EA  +   +  + +Q +  T+N +  A  + G  
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+ +   +  N + P+ RT  ++     ++G +E+       M+E     N  + NS+
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSI 730

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           ++  L   D       L +++E     +  T S  +D  S     GK QE
Sbjct: 731 VRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSG----GKYQE 776


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 216/423 (51%), Gaps = 1/423 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  K K  +A  +F+ + + G  P+LITYTT++  L +     + L L+ K+E+ G 
Sbjct: 148 LNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGC 207

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD + +N +I++  +    +EAM  F +M D G  P   TY++++ G+ N+G+  E+  
Sbjct: 208 KPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATS 267

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M   +NV PN  T+ ILV   C +  I EA  V   M  +G++PDA TY+ L   Y
Sbjct: 268 LFKQMI-GRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGY 326

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
               +   A+++   M      P+ R   I+++G+CK   + +A   L  M + ++ P+ 
Sbjct: 327 CLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDT 386

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +++L++GF          K    M  +G+ PD +T+S ++D     G + +   +   
Sbjct: 387 VTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKA 446

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M ++ IEP I +++IL +G    G+ + A  + +++   G+ P+VV +T +ISG      
Sbjct: 447 MQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGL 506

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
              A  ++ KM   G  PN  TY   + G+     P  A  L++ M  +G     ST Q+
Sbjct: 507 SNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQM 566

Query: 421 VAD 423
           + D
Sbjct: 567 LLD 569



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 196/416 (47%), Gaps = 3/416 (0%)

Query: 26  RPTLITYTTLVAALTRQKR--FKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           RP + T T L+  L    R       S + K+ K G++P  + F  ++N       + +A
Sbjct: 101 RPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDA 160

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +K+F ++   G  P+  TY T+IKG   +G    +L+LL+ M ++K  KP+   YN ++ 
Sbjct: 161 VKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKM-EEKGCKPDVVAYNTVID 219

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C      EA     +MV  GI P+ VTY+++   +   G+   A  +  +M    V P
Sbjct: 220 SLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMP 279

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  T  I+V G CKEG + +A R    M E  V P+   +++L+ G+      D   K  
Sbjct: 280 NTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLF 339

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            +M   G  P V  ++ +++    +  + + + +  +M    + PD   +S L +G+ +A
Sbjct: 340 DIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQA 399

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G PQ A+ +   M  YG+ P+ + ++ ++ G C    +  A  + + M E  I P++  Y
Sbjct: 400 GRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIY 459

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             L+ G     +   A EL   +  KG++P   T  ++       GL+ EA  + +
Sbjct: 460 NILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFR 515



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 210/442 (47%), Gaps = 5/442 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCL---IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           +N L    + H  H+ F+ L    + G +PT +T+ TL+  L  + +    + L  ++ K
Sbjct: 111 INCLCHSNRDH-VHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGK 169

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G  P  I +  +I    + G+   A+++ +KM++ GCKP    YNT+I       +  E
Sbjct: 170 MGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANE 229

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           ++     M  D+ + PN  TY+ ++  +C+   + EA ++  +M+   + P+ VT+  L 
Sbjct: 230 AMYFFSEMV-DQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILV 288

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               + G    A ++   M  N V P+  T   ++ GYC +  M++A +    M      
Sbjct: 289 DGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFA 348

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P++ V+N LI G    +  +     L+ M +  + PD VT+ST+M  +  AG     Q++
Sbjct: 349 PSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKL 408

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F +M   G+ PD   +SIL  G  + G   +A  +L +M++  + P++ ++  +I G CN
Sbjct: 409 FKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCN 468

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             K++ A  ++  +   GI P++ TY  ++ G  +      A E+ + M   G  P   T
Sbjct: 469 FGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCT 528

Query: 418 IQLVADSWRAIGLAREAKRVLK 439
             +    +   G    A R+++
Sbjct: 529 YNVAIQGFLRNGDPSNAVRLIE 550



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 102/431 (23%), Positives = 198/431 (45%), Gaps = 38/431 (8%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           FN L+     P ++ +  L+ +L ++K + +++SL  +++   ++P+      +IN    
Sbjct: 57  FNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCH 116

Query: 77  SG--NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
           S   +V  A     KM   G +PT  T+ T                              
Sbjct: 117 SNRDHVHFAFSALGKMFKLGLQPTHVTFGT------------------------------ 146

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
                 L+   CSK  I +A  +  ++   G  P  +TY T+ +   + G T  A Q+L 
Sbjct: 147 ------LLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLK 200

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           +M+    +P+      ++   CK+    +AM F   M +  + PN+V ++S++ GF ++ 
Sbjct: 201 KMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLG 260

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
             +        M    V P+ VTF+ ++D     G++ + + +F+ M + G+EPD + +S
Sbjct: 261 QLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYS 320

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            L  GY    +  +A+ +   M   G  P+V ++  +I+G C + ++  A ++  +M + 
Sbjct: 321 ALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDR 380

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
            + P+  TY TL+ G+ +A +P  A++L + M   G+ P   T  ++ D     G   EA
Sbjct: 381 DLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEA 440

Query: 435 KRVLKSAEEDR 445
            R+LK+ +E +
Sbjct: 441 FRLLKAMQESK 451



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 1/284 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G   EA  +F  + E G  P   TY+ L+     Q +      L   +   G  P 
Sbjct: 291 LCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPS 350

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             ++N +IN   +S  ++EA  +  +M D    P T TY+TL++G+   G+P+ + KL +
Sbjct: 351 VRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFK 410

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M     + P+  TY+IL+   C    ++EA+ ++  M  S I+P    YN L +    +
Sbjct: 411 EMCS-YGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNF 469

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A ++   +    ++P+  T  +++SG  KEG   +A     +M      PN   +
Sbjct: 470 GKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTY 529

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
           N  I+GFL   D     + +  M   G   D  TF  ++D  S+
Sbjct: 530 NVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDLESN 573



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 118/281 (41%), Gaps = 37/281 (13%)

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK------ 254
           + P+  T G   S Y    ++ DA+    ++  +   P +VVFN L+   +  K      
Sbjct: 30  ISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVI 89

Query: 255 ----------------------------DSDGVD---KALTLMEEFGVKPDVVTFSTIMD 283
                                       + D V     AL  M + G++P  VTF T+++
Sbjct: 90  SLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLN 149

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
              S   +    ++FD++ K G  P +  ++ + KG  + G    A  +L  M + G  P
Sbjct: 150 GLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKP 209

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           +VV + TVI   C   +   AM  + +M + GI PN+ TY ++L G+    Q   A  L 
Sbjct: 210 DVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLF 269

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           + M  + V P   T  ++ D     G+  EA+RV +   E+
Sbjct: 270 KQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTEN 310


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 216/413 (52%), Gaps = 1/413 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  + + ++  G +P L TY T+V  L ++      LSL+ K+EK  ++ D +++ 
Sbjct: 200 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I+A     NV++A+ +F +M + G +P   TYN+LI+   N G+  ++ +LL  M + 
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K + PN  T++ L+ A+  +  + EA  +  +M+   I PD  TY++L   +  +     
Sbjct: 320 K-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A+ M   M +    PN  T   ++ G+CK   +E+ M     M +  +  N V +N+LI+
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G     D D   K    M   GV PD++T+S ++D     G + K   +F+ + K+ +EP
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           DI+ ++I+ +G  +AG+ +    +  S+   GV PNV+++TT+ISG+C     + A +++
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            +M E G  PN  TY TL+           + EL++ M   G     STI +V
Sbjct: 559 REMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 611



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 215/437 (49%), Gaps = 1/437 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  +A  +F  +++    P+++ +  L++A+ +  +F  ++SL  +++   +  D   +N
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +IN       +  A+ +  KM   G +P   T ++L+ GY +  +  E++ L+  M   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV- 178

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
              +PN  T+N L+      N   EA  ++ +MVA G QPD  TY T+     + G+   
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  +L +M+  ++  +      I+   C   N+ DA+     M    + PN+V +NSLI+
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
              +        + L+ M E  + P+VVTFS ++DA+   G + + ++++D+M+K  I+P
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           DI  +S L  G+       +A+ +   M      PNVV + T+I G+C A +++  M ++
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            +M + G+  N  TY TL+ G  +A     A+++ + M   GV P   T  ++ D     
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478

Query: 429 GLAREAKRVLKSAEEDR 445
           G   +A  V +  ++ +
Sbjct: 479 GKLEKALVVFEYLQKSK 495



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/431 (24%), Positives = 219/431 (50%), Gaps = 2/431 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G+ P ++T ++L+      KR    ++L+ ++     +P+++ FN +I+       
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             EA+ +  +M   GC+P   TY T++ G    G  + +L LL+ M + K ++ +   Y 
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK-IEADVVIYT 259

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++ A C+  ++ +A N+  +M   GI+P+ VTYN+L R    YG    A ++L +M   
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           ++ PN  T   ++  + KEG + +A +    M +  + P++  ++SLI GF      D  
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
                LM      P+VVT++T++  +  A  + +  E+F +M + G+  +   ++ L +G
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             +AG+   A+ I   M   GV P+++ ++ ++ G C   K+++A+ ++E + +  + P+
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + TY  ++ G  +A +     +L   +  KGV+P       +   +   GL  EA  + +
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 559

Query: 440 SAEEDRQSMPN 450
             +ED  ++PN
Sbjct: 560 EMKED-GTLPN 569



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 181/344 (52%), Gaps = 3/344 (0%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           ++A  +F  +  +G RP ++TY +L+  L    R+     L+S + +  + P+ + F+A+
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 331

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           I+A  + G + EA K++ +M      P   TY++LI G+    + +E+  + +LM   K+
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS-KD 390

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
             PN  TYN L++ +C    +EE   +  +M   G+  + VTYNTL +   Q G+   A+
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           ++  +M ++ V P+  T  I++ G CK G +E A+     +++ ++ P++  +N +I+G 
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510

Query: 251 LDI-KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
               K  DG D   +L  + GVKP+V+ ++T++  +   GL  +   +F +M + G  P+
Sbjct: 511 CKAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
              ++ L +  +R G+   +  ++  MR  G   +    + VI+
Sbjct: 570 SGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 152/313 (48%), Gaps = 1/313 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  +A  + + +IE    P ++T++ L+ A  ++ +      L  ++ K  + PD
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              ++++IN       +DEA  +F+ M    C P   TYNTLIKG+    + EE ++L +
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            MSQ + +  N  TYN L++        + A  +  KMV+ G+ PD +TY+ L     +Y
Sbjct: 420 EMSQ-RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+  +A  +   +Q +++ P+  T  I++ G CK G +ED       +    V PN++++
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            ++I GF      +  D     M+E G  P+  T++T++ A    G      E+  +M  
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 598

Query: 304 AGIEPDIHVFSIL 316
            G   D    S++
Sbjct: 599 CGFVGDASTISMV 611


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 216/413 (52%), Gaps = 1/413 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  + + ++  G +P L TY T+V  L ++      LSL+ K+EK  ++ D +++ 
Sbjct: 184 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 243

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I+A     NV++A+ +F +M + G +P   TYN+LI+   N G+  ++ +LL  M + 
Sbjct: 244 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 303

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K + PN  T++ L+ A+  +  + EA  +  +M+   I PD  TY++L   +  +     
Sbjct: 304 K-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 362

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A+ M   M +    PN  T   ++ G+CK   +E+ M     M +  +  N V +N+LI+
Sbjct: 363 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 422

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G     D D   K    M   GV PD++T+S ++D     G + K   +F+ + K+ +EP
Sbjct: 423 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 482

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           DI+ ++I+ +G  +AG+ +    +  S+   GV PNV+++TT+ISG+C     + A +++
Sbjct: 483 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 542

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            +M E G  PN  TY TL+           + EL++ M   G     STI +V
Sbjct: 543 REMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 595



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 215/437 (49%), Gaps = 1/437 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  +A  +F  +++    P+++ +  L++A+ +  +F  ++SL  +++   +  D   +N
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +IN       +  A+ +  KM   G +P   T ++L+ GY +  +  E++ L+  M   
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV- 162

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
              +PN  T+N L+      N   EA  ++ +MVA G QPD  TY T+     + G+   
Sbjct: 163 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 222

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  +L +M+  ++  +      I+   C   N+ DA+     M    + PN+V +NSLI+
Sbjct: 223 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 282

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
              +        + L+ M E  + P+VVTFS ++DA+   G + + ++++D+M+K  I+P
Sbjct: 283 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 342

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           DI  +S L  G+       +A+ +   M      PNVV + T+I G+C A +++  M ++
Sbjct: 343 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 402

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            +M + G+  N  TY TL+ G  +A     A+++ + M   GV P   T  ++ D     
Sbjct: 403 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 462

Query: 429 GLAREAKRVLKSAEEDR 445
           G   +A  V +  ++ +
Sbjct: 463 GKLEKALVVFEYLQKSK 479



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/431 (24%), Positives = 219/431 (50%), Gaps = 2/431 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G+ P ++T ++L+      KR    ++L+ ++     +P+++ FN +I+       
Sbjct: 125 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 184

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             EA+ +  +M   GC+P   TY T++ G    G  + +L LL+ M + K ++ +   Y 
Sbjct: 185 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK-IEADVVIYT 243

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++ A C+  ++ +A N+  +M   GI+P+ VTYN+L R    YG    A ++L +M   
Sbjct: 244 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 303

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           ++ PN  T   ++  + KEG + +A +    M +  + P++  ++SLI GF      D  
Sbjct: 304 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 363

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
                LM      P+VVT++T++  +  A  + +  E+F +M + G+  +   ++ L +G
Sbjct: 364 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 423

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             +AG+   A+ I   M   GV P+++ ++ ++ G C   K+++A+ ++E + +  + P+
Sbjct: 424 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 483

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + TY  ++ G  +A +     +L   +  KGV+P       +   +   GL  EA  + +
Sbjct: 484 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 543

Query: 440 SAEEDRQSMPN 450
             +ED  ++PN
Sbjct: 544 EMKED-GTLPN 553



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 181/344 (52%), Gaps = 3/344 (0%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           ++A  +F  +  +G RP ++TY +L+  L    R+     L+S + +  + P+ + F+A+
Sbjct: 256 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 315

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           I+A  + G + EA K++ +M      P   TY++LI G+    + +E+  + +LM   K+
Sbjct: 316 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS-KD 374

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
             PN  TYN L++ +C    +EE   +  +M   G+  + VTYNTL +   Q G+   A+
Sbjct: 375 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 434

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           ++  +M ++ V P+  T  I++ G CK G +E A+     +++ ++ P++  +N +I+G 
Sbjct: 435 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 494

Query: 251 LDI-KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
               K  DG D   +L  + GVKP+V+ ++T++  +   GL  +   +F +M + G  P+
Sbjct: 495 CKAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 553

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
              ++ L +  +R G+   +  ++  MR  G   +    + VI+
Sbjct: 554 SGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 597



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 152/313 (48%), Gaps = 1/313 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  +A  + + +IE    P ++T++ L+ A  ++ +      L  ++ K  + PD
Sbjct: 284 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 343

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              ++++IN       +DEA  +F+ M    C P   TYNTLIKG+    + EE ++L +
Sbjct: 344 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 403

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            MSQ + +  N  TYN L++        + A  +  KMV+ G+ PD +TY+ L     +Y
Sbjct: 404 EMSQ-RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 462

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+  +A  +   +Q +++ P+  T  I++ G CK G +ED       +    V PN++++
Sbjct: 463 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 522

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            ++I GF      +  D     M+E G  P+  T++T++ A    G      E+  +M  
Sbjct: 523 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 582

Query: 304 AGIEPDIHVFSIL 316
            G   D    S++
Sbjct: 583 CGFVGDASTISMV 595


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 221/423 (52%), Gaps = 1/423 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  K K  +A  +F+ +++ G+ P +ITY+T++  L +       + L+ K+E+ G 
Sbjct: 54  LNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGC 113

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP+ ++++ +I++  +   + EAM+   +M + G  P   TY++++ G+ N+G+  E+  
Sbjct: 114 KPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATS 173

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M + +NV P+  T+NILV     +  I EA  V   M+  G++P+  TYN L   Y
Sbjct: 174 LFKQMVE-RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGY 232

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
               +   A+++   M      P+ R+  I++ G+CK G +++A   L  M    + P+ 
Sbjct: 233 CSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDT 292

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +++L+KGF          K L  M  +G+ PD++T+S ++D     G + +  E+   
Sbjct: 293 VTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKA 352

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M ++ IEP+I +++IL +G    G+ + A  + +++   G+ P+VV +T +ISG      
Sbjct: 353 MQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGL 412

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
              A  ++  M   G  PN  TY  ++ G+        A  L++ M  +G     ST Q+
Sbjct: 413 SNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQM 472

Query: 421 VAD 423
           ++D
Sbjct: 473 LSD 475



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 203/416 (48%), Gaps = 3/416 (0%)

Query: 26  RPTLITYTTLVAAL--TRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           RP + T T L+     +    F    S++  + K G++P+ + F+ ++N  S    + +A
Sbjct: 7   RPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDA 66

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +K+F +M   G +P   TY+T+I G   +G    +++LL+ M ++K  KPN   Y+ ++ 
Sbjct: 67  VKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKM-EEKGCKPNVVVYSTIID 125

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C    I EA   + +MV  GI P+ VTY+++   +   G +  A  +  +M    V P
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMP 185

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T  I+V G  KEG + +A      M E  V PN+  +N+L+ G+      D   K  
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLF 245

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            +M   G  P V +++ ++     +G + + + +  +M    + PD   +S L KG+ + 
Sbjct: 246 NIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQD 305

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G PQ A+ +L  MR YG+ P+++ ++ V+ G C    +  A  + + M E  I PN+  Y
Sbjct: 306 GRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIY 365

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             L+ G     +   A EL   +  KG++P   T  ++       GL+ EA  + +
Sbjct: 366 TILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFR 421



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 165/315 (52%)

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           ++PN  T++ L+    SK  I +A  +  +MV  G +PD +TY+T+     + G T  A 
Sbjct: 43  LQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAI 102

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           Q+L +M+    +PN      I+   CK+  + +AM FL  M    + PN+V ++S++ GF
Sbjct: 103 QLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGF 162

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
            ++  S+        M E  V PD VTF+ ++D  S  G++ + Q +F+ M++ G+EP++
Sbjct: 163 CNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNV 222

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
           + ++ L  GY    +  +A+ +   M + G  P+V  +  +I G C + ++  A  +  +
Sbjct: 223 NTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAE 282

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M    + P+  TY TL+ G+ +  +P  A++LL+ M   G+ P   T  +V D     G 
Sbjct: 283 MSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGH 342

Query: 431 AREAKRVLKSAEEDR 445
             EA  +LK+ +E +
Sbjct: 343 LDEAFELLKAMQESK 357



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 140/311 (45%), Gaps = 37/311 (11%)

Query: 130 NVKPNDRTYNILVRAWCSKNS--IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           N++P+  T  IL+  +C  N      A++V+  M   G+QP+ VT++TL           
Sbjct: 5   NIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTL----------- 53

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
                                   ++G   +  + DA++    M ++   P+++ ++++I
Sbjct: 54  ------------------------LNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTII 89

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G   +  +    + L  MEE G KP+VV +STI+D+     L+ +  E   +MV  GI 
Sbjct: 90  NGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGIS 149

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P++  +S +  G+   G   +A S+   M +  V P+ V F  ++ G      +  A  +
Sbjct: 150 PNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCV 209

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           +E M E G+ PN+ TY  L+ GY    Q   A++L  +M  KG  P   +  ++      
Sbjct: 210 FETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCK 269

Query: 428 IGLAREAKRVL 438
            G   EAK +L
Sbjct: 270 SGRIDEAKGLL 280



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 4/211 (1%)

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMG 292
           + P++     LI  F    + D    A ++   M + G++P+ VTFST+++  SS   + 
Sbjct: 6   IRPDVYTLTILINCFCH-SNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKII 64

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
              ++FD+MVK G EPD+  +S +  G  + G    A  +L  M + G  PNVV+++T+I
Sbjct: 65  DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
              C    +  AM    +M   GI+PN+ TY ++L G+    +   A  L + M E+ V 
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184

Query: 413 PKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           P   T  ++ D     G+  EA+ V ++  E
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIE 215



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 3/187 (1%)

Query: 266 MEEFGVKPDVVTFSTIMDAW--SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           M+   ++PDV T + +++ +  S+         +  +M K G++P+   FS L  G    
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
            +   A  +   M K G  P+V+ ++T+I+G C       A+ + +KM E G  PN+  Y
Sbjct: 61  AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            T++    + K    A E L  M  +G+ P   T   +   +  +G + EA  + K   E
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180

Query: 444 DRQSMPN 450
            R  MP+
Sbjct: 181 -RNVMPD 186


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 227/440 (51%), Gaps = 8/440 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA+   + ++E G  P   TYT+L+    ++K   S   +  ++   G + + + +
Sbjct: 232 GNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAY 291

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+       +DEAM +F KMKD  C PT  TY  LIK      +  E+L L++ M +
Sbjct: 292 THLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEM-E 350

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +K +KPN  TY +L+ + CS+  +E+A  ++ +M+  G+ P+ +TYN L   Y + G   
Sbjct: 351 EKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  ++  M++  +RPN RT   ++ GYCK  N+  AM  L +M E +V P++V +NSLI
Sbjct: 411 DALDVVELMESRNLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYNSLI 469

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G     + D   + L+LM + G+ PD  T+++++D+   +  + +  ++FD + +  + 
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVI 529

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P++ +++ L  GY +AG+  +A  +L  M      PN + F  +I G C   K++ A  +
Sbjct: 530 PNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLL 589

Query: 368 YEKMCEIGINPNLKTYETL---LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
            EKM +I + P + T   L   L   G+    +R     Q M   G +P   T      +
Sbjct: 590 EEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRR---FQQMLSSGTKPDAHTYTTFIQT 646

Query: 425 WRAIGLAREAKRVLKSAEED 444
           +   G  ++A+ ++   +E+
Sbjct: 647 YCREGRLQDAEDMVAKMKEN 666



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 225/472 (47%), Gaps = 32/472 (6%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G  +  EA  +   + E+G +P + TYT L+ +L  Q + +    L+ ++ + G+ P+
Sbjct: 333 LCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPN 392

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG--NVGKPEESLKL 121
            I +NA+IN   + G +++A+ + + M+    +P T TYN LIKGY   NV K   ++ +
Sbjct: 393 VITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHK---AMGV 449

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           L  M + K V P+  TYN L+   C   + + A+ ++  M   G+ PD  TY ++  +  
Sbjct: 450 LNKMLERK-VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLC 508

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           +      A  +   ++   V PN      ++ GYCK G + +A   L +M      PN +
Sbjct: 509 KSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSL 568

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVK----PDVVTFSTIMDAWSSAGLMGKCQEI 297
            FN+LI G      +DG  K  TL+EE  VK    P V T + ++      G        
Sbjct: 569 TFNALIHGLC----TDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRR 624

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F  M+ +G +PD H ++   + Y R G  Q AE ++  M++ GV P++  ++++I G+ +
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGD 684

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLL-----WGYGEAK--QPWRA----------- 399
             +   A  + ++M + G  P+  T+ +L+       YG+ K  +P              
Sbjct: 685 LGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIV 744

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
            ELL+ M E GV P   + + +      IG  R A++V    ++     P++
Sbjct: 745 VELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSE 796



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 202/467 (43%), Gaps = 55/467 (11%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           H+A  + N ++E    P ++TY +L+    R   F S   L+S +   G+ PD   + +M
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSM 503

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           I++  +S  V+EA  +F  ++     P    Y  LI GY   GK  E+  +L+ M   KN
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLS-KN 562

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
             PN  T+N L+   C+   ++EA  +  KMV   +QP   T   L     + G+   A 
Sbjct: 563 CLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAY 622

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           +   +M ++  +P+  T    +  YC+EG ++DA   + +MKE  V P+L  ++SLIKG+
Sbjct: 623 RRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGY 682

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW-------SSAGLMGKCQ-------- 295
            D+  ++     L  M + G +P   TF +++             G  G C         
Sbjct: 683 GDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFD 742

Query: 296 ---EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR-KYGVHPNVVMFTTV 351
              E+ + MV+ G+ P+   +  L  G    G  + AE +   M+ K G+ P+ ++F  +
Sbjct: 743 IVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNAL 802

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW---------------------GY 390
           +S  C   K   A  + + M  +G  P L++ + L+                      GY
Sbjct: 803 LSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGY 862

Query: 391 GEAKQPWRA--------------EELLQVMEEKGVRPKKSTIQLVAD 423
            + +  W+                EL  VME+ G      T  L+ +
Sbjct: 863 YDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIE 909



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 187/389 (48%), Gaps = 14/389 (3%)

Query: 70  MINACSESGNVDEAMKIFQKM-KDSGC----KPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           MI +C    +    + + +KM KD       K     YNTL+      G  +E  ++   
Sbjct: 149 MIKSCDSVADTLFVLDLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYME 208

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M +DK V PN  TYN +V  +C   ++EEA   V  +V +G+ PD  TY +L   Y Q  
Sbjct: 209 MLEDK-VCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRK 267

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +   A ++  EM     R NE     ++ G C E  +++AM    +MK+ + +P +  + 
Sbjct: 268 DLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYT 327

Query: 245 SLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            LIK       S+   +AL L   MEE G+KP++ T++ ++D+  S   + K +E+   M
Sbjct: 328 VLIKALCG---SERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQM 384

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           ++ G+ P++  ++ L  GY + G  + A  ++  M    + PN   +  +I G+C    +
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKR-NV 443

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            +AM +  KM E  + P++ TY +L+ G   +     A  LL +M ++G+ P   T   +
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSM 503

Query: 422 ADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            DS        EA  +  S E+ +  +PN
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQ-KDVIPN 531



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/435 (19%), Positives = 174/435 (40%), Gaps = 88/435 (20%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A+ + + + + G  P   TYT+++ +L + KR +    L   +E+  + P+ +++
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMY 535

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            A+I+   ++G V+EA  + +KM    C P + T+N LI G    GK +E+  L + M +
Sbjct: 536 TALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVK 595

Query: 128 ----------------------------------DKNVKPNDRTYNILVRAWCSKNSIEE 153
                                                 KP+  TY   ++ +C +  +++
Sbjct: 596 IDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQD 655

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYA-------------------------------- 181
           A ++V KM  +G+ PD  TY++L + Y                                 
Sbjct: 656 AEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIK 715

Query: 182 -----QYGETYRAE----------------QMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
                +YG+    E                ++L +M  + V PN ++   ++ G C+ GN
Sbjct: 716 HLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGN 775

Query: 221 MEDAMRFLYRMKELE-VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
           +  A +    M++ E + P+ +VFN+L+     ++  +   K +  M   G  P + +  
Sbjct: 776 LRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCK 835

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
            ++      G   +   +F ++++ G   D   + I+  G  + G  +    +   M K 
Sbjct: 836 ILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKN 895

Query: 340 GVHPNVVMFTTVISG 354
           G   +   ++ +I G
Sbjct: 896 GCTFSSQTYSLLIEG 910



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 107/272 (39%), Gaps = 53/272 (19%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+  G    A+  F  ++  G +P   TYTT +    R+ R +    +++K++++G+ PD
Sbjct: 612 LLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPD 671

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG-----YGNV--GKP- 115
              ++++I    + G  + A  + ++M D+GC+P+  T+ +LIK      YG V  G+P 
Sbjct: 672 LFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPG 731

Query: 116 -------------------------------EESL--------------KLLQLMSQDKN 130
                                           E L              K+   M Q + 
Sbjct: 732 VCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEG 791

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           + P++  +N L+   C      EA  VV  M+  G  P   +   L     + GE  R  
Sbjct: 792 ISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGT 851

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNME 222
            +   +       +E    II+ G  K+G +E
Sbjct: 852 SVFQNLLQCGYYDDELAWKIIIDGVGKQGLVE 883


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 210/391 (53%), Gaps = 1/391 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A   F+ ++ +G  P + TY  LV AL  +   K  LS++  +   G  P+++ +N ++ 
Sbjct: 141 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVA 200

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
           A   +G VD A ++   M++ G KP   T+N+++ G    G+ E++ K+   M ++  + 
Sbjct: 201 AFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKE-GLA 259

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+  +YN LV  +C      EA +V  +M   GI PD VT+ +L     + G   RA  +
Sbjct: 260 PDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGL 319

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           + EM+   ++ NE T   ++ G+CK+G ++DA+  +  M++  + P++V +N+LI G+  
Sbjct: 320 VREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCM 379

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +   D   + +  ME  GVKPDVVT+STI+ A+   G      ++   M++ G+ PD   
Sbjct: 380 VGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAIT 439

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           +S L +          A  +  +M   G+ P+ V +T++I G C    ++RA+S++++M 
Sbjct: 440 YSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMV 499

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           + G+ P++ TY  L+ G  ++ +   A+ LL
Sbjct: 500 KAGVLPDVVTYSVLINGLSKSARTKEAQRLL 530



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 199/402 (49%), Gaps = 16/402 (3%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G+G   EA  +   +   G  P  +TY TLVAA  R         L+  + + G+KP+
Sbjct: 167 LCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPN 226

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + FN+++N   ++G +++A K+F +M   G  P   +YNTL+ GY  VG   E+L +  
Sbjct: 227 LVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFA 286

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M++ K + P+  T+  L+   C   ++E A  +V +M   G+Q + +T+  L   + + 
Sbjct: 287 EMTR-KGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKK 345

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A   + EM+  +++P+      +++GYC  G M++A   +  M+   V P++V +
Sbjct: 346 GFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTY 405

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           ++++  +    D+    +    M E GV PD +T+S+++        +G    +F +M+ 
Sbjct: 406 STILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMIS 465

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G++PD   ++ L  G+ + G  ++A S+   M K GV P+VV ++ +I+G   + + + 
Sbjct: 466 LGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKE 525

Query: 364 AMSI---------------YEKMCEIGINPNLKTYETLLWGY 390
           A  +               Y+ +     N  LK+   LL G+
Sbjct: 526 AQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGF 567



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 166/324 (51%), Gaps = 2/324 (0%)

Query: 94  GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
           G  P+   YN ++    +   P  + +    M  D  V PN  TYNILVRA C +   +E
Sbjct: 118 GYAPSVLAYNAVLLALSDASLPS-ARRFFDSMLSD-GVAPNVYTYNILVRALCGRGHRKE 175

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A +V+  M  +G  P+AVTYNTL  A+ + GE  RAE+++  M+   ++PN  T   +V+
Sbjct: 176 ALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVN 235

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
           G CK G MEDA +    M +  + P+ V +N+L+ G+  +  S         M   G+ P
Sbjct: 236 GICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMP 295

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           DVVTF++++     AG + +   +  +M + G++ +   F+ L  G+ + G    A   +
Sbjct: 296 DVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAV 355

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             MR+  + P+VV +  +I+G+C   +M  A  +  +M   G+ P++ TY T+L  Y + 
Sbjct: 356 REMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKN 415

Query: 394 KQPWRAEELLQVMEEKGVRPKKST 417
                A +L Q M E GV P   T
Sbjct: 416 GDTHSAFQLNQQMLENGVLPDAIT 439



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 219/422 (51%), Gaps = 22/422 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +   G+  +A  +F+ +++EG  P  ++Y TLV    +       LS+ +++ + G+
Sbjct: 234 VNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGI 293

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + F ++I+   ++GN++ A+ + ++M++ G +    T+  LI G+   G  +++L 
Sbjct: 294 MPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALL 353

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            ++ M Q + ++P+   YN L+  +C    ++EA  +V +M A G++PD VTY+T+  AY
Sbjct: 354 AVREMRQCR-IQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAY 412

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+T+ A Q+  +M  N V P+  T   ++   C+E  + DA      M  L + P+ 
Sbjct: 413 CKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDE 472

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V + SLI G    K+ + V++AL+L +E    GV PDVVT+S +++  S +    + Q +
Sbjct: 473 VTYTSLIDGH--CKEGN-VERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRL 529

Query: 298 ---------------FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
                          +D +++     ++     L KG+   G   +A+ +  S+     +
Sbjct: 530 LFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWN 589

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
            +  +++ +I G C    + +A+S +++M + G  PN  +  +L+ G  E      A+++
Sbjct: 590 LDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQV 649

Query: 403 LQ 404
           +Q
Sbjct: 650 IQ 651



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 156/324 (48%), Gaps = 1/324 (0%)

Query: 102 YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
           +++LIK Y ++             ++     P+   YN ++ A  S  S+  A      M
Sbjct: 90  FDSLIKSYASLPSRASLAAAALAFARSAGYAPSVLAYNAVLLAL-SDASLPSARRFFDSM 148

Query: 162 VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM 221
           ++ G+ P+  TYN L RA    G    A  +L +M+     PN  T   +V+ +C+ G +
Sbjct: 149 LSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEV 208

Query: 222 EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
           + A R +  M+E  + PNLV FNS++ G       +   K    M + G+ PD V+++T+
Sbjct: 209 DRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTL 268

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +  +   G   +   +F +M + GI PD+  F+ L     +AG  ++A  ++  MR+ G+
Sbjct: 269 VGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGL 328

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
             N + FT +I G+C    +  A+    +M +  I P++  Y  L+ GY    +   A E
Sbjct: 329 QMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARE 388

Query: 402 LLQVMEEKGVRPKKSTIQLVADSW 425
           L++ ME KGV+P   T   +  ++
Sbjct: 389 LVREMEAKGVKPDVVTYSTILSAY 412



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 112/229 (48%), Gaps = 3/229 (1%)

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
           + ++  A RF   M    V PN+  +N L++              L  M   G  P+ VT
Sbjct: 135 DASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVT 194

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           ++T++ A+  AG + + + + D M + G++P++  F+ +  G  +AG  + A  +   M 
Sbjct: 195 YNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMV 254

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
           K G+ P+ V + T++ G+C       A+S++ +M   GI P++ T+ +L+    +A    
Sbjct: 255 KEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLE 314

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
           RA  L++ M E+G++  + T   + D +   G   +A   L +  E RQ
Sbjct: 315 RAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDA---LLAVREMRQ 360



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 118/254 (46%), Gaps = 16/254 (6%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L  + +  +AH +F  +I  G +P  +TYT+L+    ++   +  LSL  ++ K G+
Sbjct: 444 IRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGV 503

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTL--------------- 105
            PD + ++ +IN  S+S    EA ++  K+      P    Y+ L               
Sbjct: 504 LPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLAL 563

Query: 106 IKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
           +KG+   G   E+ K+ Q +  D+N   +   Y++L+   C + ++ +A +   +M+  G
Sbjct: 564 LKGFCMKGLMNEADKVYQSI-LDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCG 622

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
             P++ +  +L R   + G    A+Q++ ++ N     +      ++    KEGN++  +
Sbjct: 623 FAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVL 682

Query: 226 RFLYRMKELEVHPN 239
             L+ M    + P+
Sbjct: 683 DVLHGMARDGLLPS 696


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 237/421 (56%), Gaps = 1/421 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   +A+  ++ +++ G  P ++TY +++AAL + +     + +++ + K+G+
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + +N++++    SG   EA+   +KM+  G +P   TY+ L+      G+  E+ K
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M++ + +KP   TY  L++ + +K ++ E   ++  MV +GI PD   ++ L  AY
Sbjct: 323 IFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+ G+  +A  +  +M+   + PN  T G ++   CK G +EDAM +  +M +  + P  
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +V+NSLI G       +  ++ +  M + G+  + + F++I+D+    G + + +++F+ 
Sbjct: 442 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 501

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ G++P++  ++ L  GY  AG+  +A  +L+ M   G+ PN V ++T+I+G+C   +
Sbjct: 502 MVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR 561

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ A+ ++++M   G++P++ TY  +L G  + ++   A+EL   + E G + + ST  +
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621

Query: 421 V 421
           +
Sbjct: 622 I 622



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 213/460 (46%), Gaps = 4/460 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD---GMKPDSILFNAMINACSE 76
           + E G  P + +Y  L+  L  + R +  L L+  +  D   G  PD + +  +IN   +
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
            G+ D+A   + +M D G  P   TYN++I         ++++++L  M ++  V P+  
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN-GVMPDCM 267

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           TYN ++  +CS    +EA   + KM + G++PD VTY+ L     + G    A ++   M
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
               ++P   T G ++ GY  +G + +    L  M    +HP+  VF+ LI  +      
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKV 387

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           D      + M + G+ P+ VT+  ++     +G +      F+ M+  G+ P   V++ L
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G     + ++AE ++  M   G+  N + F ++I   C   ++  +  ++E M  IG+
Sbjct: 448 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGV 507

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            PN+ TY TL+ GY  A +   A +LL  M   G++P   T   + + +  I    +A  
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567

Query: 437 VLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQI 476
           + K  E    S       I ++ + + +  +A+   +++I
Sbjct: 568 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/468 (23%), Positives = 216/468 (46%), Gaps = 36/468 (7%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  + N +++ G  P  +TY +++       + K  +  + K+  DG++PD + ++ ++
Sbjct: 249 KAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLM 308

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   ++G   EA KIF  M   G KP  +TY TL++GY   G   E   LL LM ++  +
Sbjct: 309 DYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GI 367

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY------------------ 173
            P+   ++IL+ A+  +  +++A  V  KM   G+ P+AVTY                  
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427

Query: 174 -----------------NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
                            N+L        +  RAE+++ EM +  +  N      I+  +C
Sbjct: 428 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           KEG + ++ +    M  + V PN++ +N+LI G+      D   K L+ M   G+KP+ V
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T+ST+++ +     M     +F +M  +G+ PDI  ++I+ +G  +      A+ +   +
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
            + G    +  +  ++ G C       A+ +++ +C + +    +T+  ++    +  + 
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRN 667

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
             A++L       G+ P   T +L+A++    GL  E  ++  S E++
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDN 715



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 216/468 (46%), Gaps = 40/468 (8%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSI--LSLISKVEKDGMKPDSILFNA 69
           +A ++F+ L+  G   ++      +A + R     ++   + +++   D + PD   +  
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGI 92

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK 129
           +I  C  +G +D        +   G +     +  L+KG     +  +++ ++     + 
Sbjct: 93  LIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTEL 152

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV---ASGIQPDAVTYNTLARAYAQYGET 186
              PN  +YNIL++  C +N  +EA  +++ M      G  PD V+Y T+   + + G++
Sbjct: 153 GCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDS 212

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A     EM +  + P+  T   I++  CK   M+ AM  L  M +  V P+ + +NS+
Sbjct: 213 DKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 272

Query: 247 IK------------GFLDIKDSDGVD-----------------------KALTLMEEFGV 271
           +             GFL    SDGV+                       K    M + G+
Sbjct: 273 LHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGL 332

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           KP++ T+ T++  +++ G + +   + D MV+ GI PD +VFSIL   Y + G+  +A  
Sbjct: 333 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAML 392

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           + + MR+ G++PN V +  VI   C + +++ AM  +E+M + G++P    Y +L+ G  
Sbjct: 393 VFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLC 452

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
              +  RAEEL+  M ++G+         + DS    G   E++++ +
Sbjct: 453 TCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE 500



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 176/357 (49%), Gaps = 4/357 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + IL   G+  +A   F  +I+EG  P  I Y +L+  L    +++    LI ++   G+
Sbjct: 413 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 472

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             ++I FN++I++  + G V E+ K+F+ M   G KP   TYNTLI GY   GK +E++K
Sbjct: 473 CLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMK 532

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M     +KPN  TY+ L+  +C  + +E+A  +  +M +SG+ PD +TYN + +  
Sbjct: 533 LLSGMVS-VGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q   T  A+++   +  +  +    T  II+ G CK    +DA++    +  +++    
Sbjct: 592 FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEA 651

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FN +I   L +  +D            G+ P+  T+  + +     GL+ +  ++F  
Sbjct: 652 RTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLS 711

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM--RKYGVHPNVV-MFTTVISG 354
           M   G   D  + + + +  ++ GE  +A + L+ +  + + +  +   +F  ++SG
Sbjct: 712 MEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG 768



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/393 (23%), Positives = 171/393 (43%), Gaps = 36/393 (9%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG   E H + + ++  G  P    ++ L+ A  +Q +    + + SK+ + G+ P+++ 
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVT 408

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE---------- 116
           + A+I    +SG V++AM  F++M D G  P    YN+LI G     K E          
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468

Query: 117 -------------------------ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
                                    ES KL +LM +   VKPN  TYN L+  +C    +
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR-IGVKPNVITYNTLINGYCLAGKM 527

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           +EA  ++  MV+ G++P+ VTY+TL   Y +      A  +  EM+++ V P+  T  II
Sbjct: 528 DEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNII 587

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           + G  +      A     R+ E      L  +N ++ G    K +D   +    +    +
Sbjct: 588 LQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDL 647

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           K +  TF+ ++DA    G   + +++F      G+ P+   + ++A+  +  G  ++ + 
Sbjct: 648 KLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQ 707

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           +  SM   G   +  M   ++       ++ RA
Sbjct: 708 LFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/292 (20%), Positives = 134/292 (45%), Gaps = 5/292 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  E+  +F  ++  G +P +ITY TL+       +    + L+S +   G+KP+++ 
Sbjct: 489 EGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 548

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +IN   +   +++A+ +F++M+ SG  P   TYN +++G     +   + K L +  
Sbjct: 549 YSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA-KELYVRI 607

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +   +    TYNI++   C     ++A  +   +    ++ +A T+N +  A  + G  
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRN 667

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+ +     +N + PN  T  ++      +G +E+  +    M++     +  + N +
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFI 727

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           ++  L   +       L++++E     +  T S  +D  S     GK QE +
Sbjct: 728 VRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG----GKYQEYY 775


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 225/437 (51%), Gaps = 2/437 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA+   + ++E G  P   TYT+L+    ++K   S   + +++   G + + + +
Sbjct: 232 GNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAY 291

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+    +  +DEAM +F KMKD  C PT  TY  LIK      +  E+L L++ M +
Sbjct: 292 THLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM-E 350

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  +KPN  TY +L+ + CS+   E+A  ++ +M+  G+ P+ +TYN L   Y + G   
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  ++  M++ ++ PN RT   ++ GYCK  N+  AM  L +M E +V P++V +NSLI
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLI 469

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G     + D   + L+LM + G+ PD  T+++++D+   +  + +  ++FD + + G+ 
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN 529

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P++ +++ L  GY +AG+  +A  +L  M      PN + F  +I G C   K++ A  +
Sbjct: 530 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLL 589

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
            EKM +IG+ P + T   L+    +      A    Q M   G +P   T      ++  
Sbjct: 590 EEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCR 649

Query: 428 IGLAREAKRVLKSAEED 444
            G   +A+ ++    E+
Sbjct: 650 EGRLLDAEDMMAKMREN 666



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 220/410 (53%), Gaps = 8/410 (1%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +F  + ++   PT+ TYT L+ +L   +R    L+L+ ++E+ G+KP+   +  +I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           ++       ++A ++  +M + G  P   TYN LI GY   G  E+++ +++LM + + +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM-ESRKL 424

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PN RTYN L++ +C K+++ +A  V+ KM+   + PD VTYN+L     + G    A +
Sbjct: 425 SPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L  M +  + P++ T   ++   CK   +E+A      +++  V+PN+V++ +LI G+ 
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543

Query: 252 DIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
               +  VD+A  ++E+   K   P+ +TF+ ++    + G + +   + + MVK G++P
Sbjct: 544 ---KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
            +   +IL    ++ G+   A S    M   G  P+   +TT I  +C   ++  A  + 
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            KM E G++P+L TY +L+ GYG+  Q   A ++L+ M + G  P + T 
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTF 710



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/472 (26%), Positives = 223/472 (47%), Gaps = 32/472 (6%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G  +  EA  +   + E G +P + TYT L+ +L  Q +F+    L+ ++ + G+ P+
Sbjct: 333 LCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPN 392

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY--GNVGKPEESLKL 121
            I +NA+IN   + G +++A+ + + M+     P T TYN LIKGY   NV K   ++ +
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK---AMGV 449

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           L  M + K V P+  TYN L+   C   + + A+ ++  M   G+ PD  TY ++  +  
Sbjct: 450 LNKMLERK-VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           +      A  +   ++   V PN      ++ GYCK G +++A   L +M      PN +
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEE----FGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
            FN+LI G      +DG  K  TL+EE     G++P V T + ++      G        
Sbjct: 569 TFNALIHGLC----ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F  M+ +G +PD H ++   + Y R G    AE ++  MR+ GV P++  ++++I G+ +
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLL-------WGYGEAKQPWRAE---------- 400
             +   A  + ++M + G  P+  T+ +L+       +G  +  +P              
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTV 744

Query: 401 -ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
            ELL+ M E  V P   + + +      +G  R A++V    + +    P++
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSE 796



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 119/471 (25%), Positives = 203/471 (43%), Gaps = 55/471 (11%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           K   H+A  + N ++E    P ++TY +L+    R   F S   L+S +   G+ PD   
Sbjct: 440 KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           + +MI++  +S  V+EA  +F  ++  G  P    Y  LI GY   GK +E+  +L+ M 
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM- 558

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             KN  PN  T+N L+   C+   ++EA  +  KMV  G+QP   T   L     + G+ 
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A     +M ++  +P+  T    +  YC+EG + DA   + +M+E  V P+L  ++SL
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD------------------AWSSA 288
           IKG+ D+  ++     L  M + G +P   TF +++                   A S+ 
Sbjct: 679 IKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNM 738

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM-RKYGVHPNVVM 347
                  E+ + MV+  + P+   +  L  G    G  + AE +   M R  G+ P+ ++
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV 798

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG------------------ 389
           F  ++S  C   K   A  + + M  +G  P L++ + L+ G                  
Sbjct: 799 FNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLL 858

Query: 390 ---YGEAKQPWRA--------------EELLQVMEEKGVRPKKSTIQLVAD 423
              Y E +  W+                EL  VME+ G +    T  L+ +
Sbjct: 859 QCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 197/422 (46%), Gaps = 39/422 (9%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           Y TL+ +L R      +  +  ++ +D + P+   +N M+N   + GNV+EA +   K+ 
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS------------------------- 126
           ++G  P   TY +LI GY      + + K+   M                          
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305

Query: 127 ---------QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
                    +D    P  RTY +L+++ C      EA N+V +M  +GI+P+  TY  L 
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
            +     +  +A ++L +M    + PN  T   +++GYCK G +EDA+  +  M+  ++ 
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425

Query: 238 PNLVVFNSLIKGFL--DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           PN   +N LIKG+   ++  + GV   L  M E  V PDVVT+++++D    +G      
Sbjct: 426 PNTRTYNELIKGYCKSNVHKAMGV---LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
            +   M   G+ PD   ++ +     ++   ++A  +  S+ + GV+PNVVM+T +I G+
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C A K+  A  + EKM      PN  T+  L+ G     +   A  L + M + G++P  
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602

Query: 416 ST 417
           ST
Sbjct: 603 ST 604



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 184/382 (48%), Gaps = 13/382 (3%)

Query: 70  MINACSESGNVDEAMKIFQKM-KDS----GCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           MI +C   G+    + + +KM KD       K     YNTL+      G  +E  ++   
Sbjct: 149 MIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYME 208

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M +DK V PN  TYN +V  +C   ++EEA   V K+V +G+ PD  TY +L   Y Q  
Sbjct: 209 MLEDK-VCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRK 267

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +   A ++  EM     R NE     ++ G C    +++AM    +MK+ E  P +  + 
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYT 327

Query: 245 SLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            LIK       S+   +AL L   MEE G+KP++ T++ ++D+  S     K +E+   M
Sbjct: 328 VLIKSLCG---SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           ++ G+ P++  ++ L  GY + G  + A  ++  M    + PN   +  +I G+C +  +
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NV 443

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            +AM +  KM E  + P++ TY +L+ G   +     A  LL +M ++G+ P + T   +
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503

Query: 422 ADSWRAIGLAREAKRVLKSAEE 443
            DS        EA  +  S E+
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQ 525



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/435 (20%), Positives = 172/435 (39%), Gaps = 88/435 (20%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A+ + + + + G  P   TYT+++ +L + KR +    L   +E+ G+ P+ +++
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            A+I+   ++G VDEA  + +KM    C P + T+N LI G    GK +E+  L + M +
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595

Query: 128 ----------------------------------DKNVKPNDRTYNILVRAWCSKNSIEE 153
                                                 KP+  TY   ++ +C +  + +
Sbjct: 596 IGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD 655

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYA-------------------------------- 181
           A +++ KM  +G+ PD  TY++L + Y                                 
Sbjct: 656 AEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK 715

Query: 182 -----QYGETYRAEQMLFEMQN----------------NQVRPNERTCGIIVSGYCKEGN 220
                +YG+   +E  L  M N                + V PN ++   ++ G C+ GN
Sbjct: 716 HLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGN 775

Query: 221 MEDAMRFLYRMKELE-VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
           +  A +    M+  E + P+ +VFN+L+     +K  +   K +  M   G  P + +  
Sbjct: 776 LRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCK 835

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
            ++      G   +   +F ++++ G   D   + I+  G  + G  +    +   M K 
Sbjct: 836 VLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKN 895

Query: 340 GVHPNVVMFTTVISG 354
           G   +   ++ +I G
Sbjct: 896 GCKFSSQTYSLLIEG 910



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 148/335 (44%), Gaps = 20/335 (5%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK  EA  +   +++ G +PT+ T T L+  L +   F    S   ++   G KPD
Sbjct: 577 LCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPD 636

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +  +   I      G + +A  +  KM+++G  P   TY++LIKGYG++G+   +  +L+
Sbjct: 637 AHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLK 696

Query: 124 LMSQDKNVKPNDRTYNILVR---------------AWCSKNSIEEAWNVVY---KMVASG 165
            M +D   +P+  T+  L++                 C+ +++ E   VV    KMV   
Sbjct: 697 RM-RDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHS 755

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ-VRPNERTCGIIVSGYCKEGNMEDA 224
           + P+A +Y  L     + G    AE++   MQ N+ + P+E     ++S  CK     +A
Sbjct: 756 VTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEA 815

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
            + +  M  +   P L     LI G     + +        + + G   D + +  I+D 
Sbjct: 816 AKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDG 875

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
               GL+    E+F+ M K G +     +S+L +G
Sbjct: 876 VGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 232/422 (54%), Gaps = 2/422 (0%)

Query: 1   MNILVGKGKPHE-AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG 59
           +N L+ +G+  + A+++F+ ++++G  P ++TY ++++AL++ +       ++ ++ K+G
Sbjct: 209 INGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNG 268

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
             P+ I  N++++    SG  ++A+ +F++M   G +P   TYNTL+      G+  E+ 
Sbjct: 269 AMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEAR 328

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K+   M + +  KPN  TY  L+  + ++ S+ +  +++  MV +GIQPD   +N L   
Sbjct: 329 KIFDSMVK-RGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGT 387

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           Y ++G+   A  +  +M+   + P+  T GI++   C  G ++DAM    R+    + P+
Sbjct: 388 YTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPD 447

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            VVF +LI G       D  ++    M   G+ P+ + F+T+++     G++ + + IFD
Sbjct: 448 AVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFD 507

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            MV+  ++ D+  ++ L  GY   G+  +A  +L  M   GV PN V + T+I+G+C   
Sbjct: 508 LMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNG 567

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           +++ A S++ +M   G+NP + TY T+L G  +A++   A+EL   M + G++    T  
Sbjct: 568 RIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYN 627

Query: 420 LV 421
           ++
Sbjct: 628 II 629



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 186/408 (45%), Gaps = 7/408 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKV-----EKDGMKPDSILFNAMINACSESG 78
           G  P + +YT L+  L  + R +  L L+  +      + G  PD + +N +IN     G
Sbjct: 157 GCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREG 216

Query: 79  -NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT 137
             +D A  +F +M D G  P   TYN++I         +++  +L  M ++    PN  T
Sbjct: 217 RQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKN-GAMPNRIT 275

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           +N L+  +CS     +A  V  +M   G++PD  TYNTL     + G +  A ++   M 
Sbjct: 276 HNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMV 335

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
               +PN  T G ++ GY  EG++      L  M    + P+  +FN LI  +      D
Sbjct: 336 KRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVD 395

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
                 + M   G+ PD VT+  +MDA    G +      F  ++  G+ PD  VF  L 
Sbjct: 396 DAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLI 455

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            G     +  KAE +   M   G+ PN + F T+++  C    + RA +I++ M  + + 
Sbjct: 456 HGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQ 515

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            ++ TY TL+ GY    +   A +LL+ M   GV+P + T   + + +
Sbjct: 516 RDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGY 563



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/475 (25%), Positives = 215/475 (45%), Gaps = 51/475 (10%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFK-----SILSLISKVEKDGMKPDSI 65
           H AH+ F+ L+   HRPT  +   L  AL+   R       S+   +  V +  + P+ I
Sbjct: 36  HHAHHAFDELL---HRPTTSSIVDLNRALSDAARHSPAVAISLFRRMVMVARPKVPPNLI 92

Query: 66  LFNAMINACSESGNVD-----------------------------------EAMKI-FQK 89
            ++ +I+ CS  G++D                                   EAM I  ++
Sbjct: 93  TYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRR 152

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK----PNDRTYNILVRAW 145
           M   GC P   +Y  L+KG  +  + +++L LL  M    + +    P+  +YN ++   
Sbjct: 153 MPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGL 212

Query: 146 CSKN-SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
             +   ++ A+++  +M+  G+ PD VTYN++  A ++     +A  +L  M  N   PN
Sbjct: 213 LREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPN 272

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   ++ GYC  G   DA+    RM    V P++  +N+L+        S    K   
Sbjct: 273 RITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFD 332

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M + G KP+  T+ T++  +++ G + K   + D MV+ GI+PD ++F+IL   Y + G
Sbjct: 333 SMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHG 392

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           +   A  + + MR+ G++P+ V +  V+   C   K+  AM+ + ++   G+ P+   + 
Sbjct: 393 KVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFR 452

Query: 385 TLLWGYGEAKQPW-RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            L+ G   A+  W +AEEL   M  +G+ P       + +     G+   AK + 
Sbjct: 453 NLIHGLC-ARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIF 506



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/452 (24%), Positives = 212/452 (46%), Gaps = 9/452 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L   G+  EA  IF+ +++ GH+P   TY TL+     +     +  L+  + ++G+
Sbjct: 315 MGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGI 374

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL- 119
           +PD  +FN +I   ++ G VD+AM +F KM+  G  P T TY  ++     VGK ++++ 
Sbjct: 375 QPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMA 434

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +  +L+S+   + P+   +  L+   C+++  ++A  +  +M+  GI P+ + +NTL   
Sbjct: 435 QFGRLISE--GLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNH 492

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G   RA+ +   M    V+ +  T   ++ GYC  G +++A + L  M    V PN
Sbjct: 493 LCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPN 552

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            V +N++I G+     +  ++ A +L  +    GV P +VT+STI+     A      +E
Sbjct: 553 EVTYNTMINGYCK---NGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKE 609

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           ++  M+K+GI+ DI  ++I+  G  +      A  I  ++     H     F  +I    
Sbjct: 610 LYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALL 669

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
              +   A  ++  +   G+ PN+ TY  ++    E       ++L   +E+ G      
Sbjct: 670 KGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSR 729

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEEDRQSM 448
            +  +       G  R+A   L   +E+  S+
Sbjct: 730 MLNALVGKLLQKGEVRKAGVYLSKIDENNFSL 761



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/417 (23%), Positives = 195/417 (46%), Gaps = 1/417 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GKP++A  +F  +  +G  P + TY TL+  L +  R      +   + K G KP+S  +
Sbjct: 287 GKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATY 346

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +++  +  G++ +   +   M  +G +P    +N LI  Y   GK ++++ L   M +
Sbjct: 347 GTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRR 406

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + + P+  TY I++ A C    +++A     ++++ G+ PDAV +  L        +  
Sbjct: 407 -QGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWD 465

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +AE++  EM    + PN      +++  CKEG +  A      M  ++V  +++ +N+LI
Sbjct: 466 KAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLI 525

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G+      D   K L  M   GVKP+ VT++T+++ +   G +     +F  M   G+ 
Sbjct: 526 DGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVN 585

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P I  +S + +G  +A     A+ +   M K G+  ++  +  ++ G C       A+ I
Sbjct: 586 PGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRI 645

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           ++ +  I  +   +T+  ++    +  +   A++L   +  +G+ P   T  L+  S
Sbjct: 646 FQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKS 702



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 114/258 (44%), Gaps = 8/258 (3%)

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK-DSDG 258
           +V PN  T  +++    + G+++ A   L R+         + F+ L+K   D K  S+ 
Sbjct: 86  KVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEA 145

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV-----KAGIEPDIHVF 313
           +D AL  M   G  P+V +++ ++          +   +   M+     + G  PD+  +
Sbjct: 146 MDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSY 205

Query: 314 SILAKGYVRAG-EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           + +  G +R G +   A  +   M   G+ P+VV + ++IS    A  M +A  +  +M 
Sbjct: 206 NTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMV 265

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
           + G  PN  T+ +LL GY  + +P  A  + + M   GV P   T   +       G + 
Sbjct: 266 KNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSM 325

Query: 433 EAKRVLKSAEEDRQSMPN 450
           EA+++  S  + R   PN
Sbjct: 326 EARKIFDSMVK-RGHKPN 342



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 52/106 (49%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L+  G+  EA  +F  L+  G  P ++TY  ++ +L  Q   + +  L   +EK+G 
Sbjct: 665 IDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGC 724

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLI 106
             +S + NA++    + G V +A     K+ ++      ST  +L+
Sbjct: 725 TANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNFSLEASTAESLV 770


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 236/421 (56%), Gaps = 1/421 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   +A+  ++ +++ G  P ++TY +++AAL + +     + +++ + K+G+
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + +N++++    SG   EA+   +KM+  G +P   TY+ L+      G+  E+ K
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M++ + +KP   TY  L++ + +K ++ E   ++  MV +GI PD   ++ L  AY
Sbjct: 323 IFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A  G+  +A  +  +M+   + PN  T G ++   CK G +EDAM +  +M +  + P  
Sbjct: 382 ANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +V+NSLI G       +  ++ +  M + G+  + + F++I+D+    G + + +++F+ 
Sbjct: 442 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 501

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ G++P++  ++ L  GY  AG+  +A  +L+ M   G+ PN V ++T+I+G+C   +
Sbjct: 502 MVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR 561

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ A+ ++++M   G++P++ TY  +L G  + ++   A+EL   + E G + + ST  +
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621

Query: 421 V 421
           +
Sbjct: 622 I 622



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 214/460 (46%), Gaps = 4/460 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD---GMKPDSILFNAMINACSE 76
           + E G  P + +Y  L+  L  + R +  L L+  +  D   G  PD + +  +IN   +
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
            G+ D+A   + +M D G  P   TYN++I         ++++++L  M ++  V P+  
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN-GVMPDCM 267

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           TYN ++  +CS    +EA   + KM + G++PD VTY+ L     + G    A ++   M
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
               ++P   T G ++ GY  +G + +    L  M    +HP+  VF+ LI  + +    
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKV 387

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           D      + M + G+ P+ VT+  ++     +G +      F+ M+  G+ P   V++ L
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G     + ++AE ++  M   G+  N + F ++I   C   ++  +  ++E M  IG+
Sbjct: 448 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGV 507

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            PN+ TY TL+ GY  A +   A +LL  M   G++P   T   + + +  I    +A  
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567

Query: 437 VLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQI 476
           + K  E    S       I ++ + + +  +A+   +++I
Sbjct: 568 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/468 (23%), Positives = 217/468 (46%), Gaps = 36/468 (7%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  + N +++ G  P  +TY +++       + K  +  + K+  DG++PD + ++ ++
Sbjct: 249 KAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLM 308

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   ++G   EA KIF  M   G KP  +TY TL++GY   G   E   LL LM ++  +
Sbjct: 309 DYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GI 367

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY------------------ 173
            P+   ++IL+ A+ ++  +++A  V  KM   G+ P+AVTY                  
Sbjct: 368 HPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427

Query: 174 -----------------NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
                            N+L        +  RAE+++ EM +  +  N      I+  +C
Sbjct: 428 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           KEG + ++ +    M  + V PN++ +N+LI G+      D   K L+ M   G+KP+ V
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T+ST+++ +     M     +F +M  +G+ PDI  ++I+ +G  +      A+ +   +
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
            + G    +  +  ++ G C       A+ +++ +C + +    +T+  ++    +  + 
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRN 667

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
             A++L       G+ P   T +L+A++    GL  E  ++  S E++
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDN 715



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 215/468 (45%), Gaps = 40/468 (8%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSI--LSLISKVEKDGMKPDSILFNA 69
           +A ++F+ L+  G   ++      +A + R     ++   + +++   D + PD   +  
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGI 92

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK 129
           +I  C  +G +D        +   G +     +  L+KG     +  +++ ++     + 
Sbjct: 93  LIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTEL 152

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV---ASGIQPDAVTYNTLARAYAQYGET 186
              PN  +YNIL++  C +N  +EA  +++ M      G  PD V+Y T+   + + G++
Sbjct: 153 GCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDS 212

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A     EM +  + P+  T   I++  CK   M+ AM  L  M +  V P+ + +NS+
Sbjct: 213 DKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 272

Query: 247 IK------------GFLDIKDSDGVD-----------------------KALTLMEEFGV 271
           +             GFL    SDGV+                       K    M + G+
Sbjct: 273 LHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGL 332

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           KP++ T+ T++  +++ G + +   + D MV+ GI PD +VFSIL   Y   G+  +A  
Sbjct: 333 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAML 392

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           + + MR+ G++PN V +  VI   C + +++ AM  +E+M + G++P    Y +L+ G  
Sbjct: 393 VFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLC 452

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
              +  RAEEL+  M ++G+         + DS    G   E++++ +
Sbjct: 453 TCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE 500



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 176/357 (49%), Gaps = 4/357 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + IL   G+  +A   F  +I+EG  P  I Y +L+  L    +++    LI ++   G+
Sbjct: 413 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 472

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             ++I FN++I++  + G V E+ K+F+ M   G KP   TYNTLI GY   GK +E++K
Sbjct: 473 CLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMK 532

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M     +KPN  TY+ L+  +C  + +E+A  +  +M +SG+ PD +TYN + +  
Sbjct: 533 LLSGMVS-VGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q   T  A+++   +  +  +    T  II+ G CK    +DA++    +  +++    
Sbjct: 592 FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEA 651

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FN +I   L +  +D            G+ P+  T+  + +     GL+ +  ++F  
Sbjct: 652 RTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLS 711

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM--RKYGVHPNVV-MFTTVISG 354
           M   G   D  + + + +  ++ GE  +A + L+ +  + + +  +   +F  ++SG
Sbjct: 712 MEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG 768



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 93/393 (23%), Positives = 170/393 (43%), Gaps = 36/393 (9%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG   E H + + ++  G  P    ++ L+ A   Q +    + + SK+ + G+ P+++ 
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVT 408

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE---------- 116
           + A+I    +SG V++AM  F++M D G  P    YN+LI G     K E          
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468

Query: 117 -------------------------ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
                                    ES KL +LM +   VKPN  TYN L+  +C    +
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR-IGVKPNVITYNTLINGYCLAGKM 527

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           +EA  ++  MV+ G++P+ VTY+TL   Y +      A  +  EM+++ V P+  T  II
Sbjct: 528 DEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNII 587

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           + G  +      A     R+ E      L  +N ++ G    K +D   +    +    +
Sbjct: 588 LQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDL 647

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           K +  TF+ ++DA    G   + +++F      G+ P+   + ++A+  +  G  ++ + 
Sbjct: 648 KLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQ 707

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           +  SM   G   +  M   ++       ++ RA
Sbjct: 708 LFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/292 (20%), Positives = 134/292 (45%), Gaps = 5/292 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  E+  +F  ++  G +P +ITY TL+       +    + L+S +   G+KP+++ 
Sbjct: 489 EGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 548

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +IN   +   +++A+ +F++M+ SG  P   TYN +++G     +   + K L +  
Sbjct: 549 YSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA-KELYVRI 607

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +   +    TYNI++   C     ++A  +   +    ++ +A T+N +  A  + G  
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRN 667

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+ +     +N + PN  T  ++      +G +E+  +    M++     +  + N +
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFI 727

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           ++  L   +       L++++E     +  T S  +D  S     GK QE +
Sbjct: 728 VRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG----GKYQEYY 775


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 227/445 (51%), Gaps = 1/445 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  +GK   A  ++N ++  GH P +I+Y TL+  L         + +  K+E++G 
Sbjct: 170 INGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGC 229

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP+ + +N +I++  +   V++AM    +M   G  P   TYN+++ G   +G+  E+ +
Sbjct: 230 KPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATR 289

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M Q+   KP+  TYNI++ +      + +A + + +MV  GI PD VTY T+    
Sbjct: 290 LFKRMEQN-GCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGL 348

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G+   A ++  +M+    +P+      I+   CK+  + DAM FL  M +  + PN 
Sbjct: 349 CYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNA 408

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +++++ GF ++   D   +    M    V P+ +TFS ++D     G++ + + +F+ 
Sbjct: 409 VTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFET 468

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M + G+EP+I+ ++ L  GY    +  +A  +   M   G  P++  +  +I+G+CN+ +
Sbjct: 469 MTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRR 528

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M +A ++  +M    + PN  TY T++ G     +   A+EL + M   G+ P   T  +
Sbjct: 529 MDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSI 588

Query: 421 VADSWRAIGLAREAKRVLKSAEEDR 445
           + +     G   EA ++ KS +E +
Sbjct: 589 LLNGLCKHGHLDEALKLFKSMKEKK 613



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 227/467 (48%), Gaps = 2/467 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G  + A ++F  + + G +P ++TY T++ +L + +     +  +S++   G+
Sbjct: 205 INGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGI 264

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD+I +N++++     G ++EA ++F++M+ +GCKP   TYN +I          ++  
Sbjct: 265 PPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAAD 324

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L  M  D+ + P+  TY  ++   C    + EA  +  KM   G +PD V YNT+  + 
Sbjct: 325 FLSEMV-DQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSL 383

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A + L EM +  + PN  T   I+ G+C  G +++A +    M    V PN 
Sbjct: 384 CKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNT 443

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + F+ L+ G                M E GV+P++ T++ +M+ +     M + +++F+ 
Sbjct: 444 LTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEI 503

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV  G  PD+H ++IL  GY  +    KA+++LT M    + PN V + T++ G C   +
Sbjct: 504 MVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGR 563

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  +++KMC  G+ P L TY  LL G  +      A +L + M+EK + P      +
Sbjct: 564 LLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTI 623

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLS 467
           + +     G    AK +      D    P +   + ++ +  K+ LS
Sbjct: 624 LIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGL-LKEGLS 669



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 203/411 (49%), Gaps = 1/411 (0%)

Query: 15  YIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINAC 74
           Y+ N +   G   T+ +   L+  L R       +S+  K+ K G++PD I F  +IN  
Sbjct: 114 YLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGV 173

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
              G +  A++++ +M  SG +P   +YNTLI G  N G    ++ + + M Q+   KPN
Sbjct: 174 CNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQN-GCKPN 232

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
             TYN ++ + C    + +A + + +MV  GI PDA+TYN++       G+   A ++  
Sbjct: 233 VVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFK 292

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
            M+ N  +P+  T  II+    K+  + DA  FL  M +  + P++V + +++ G   + 
Sbjct: 293 RMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLG 352

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
             +   +    ME+ G KPDVV ++TI+D+     L+    E   +MV  GI P+   +S
Sbjct: 353 QLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYS 412

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            +  G+   G+  +A  +   M    V PN + F+ ++ G C    +  A  ++E M E 
Sbjct: 413 TILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEK 472

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           G+ PN+ TY  L+ GY    +   A ++ ++M  KG  P   +  ++ + +
Sbjct: 473 GVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGY 523



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 189/418 (45%), Gaps = 36/418 (8%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           RP+++ +   + ++ + K++ +++ L ++++  G+       N +IN      +VD A+ 
Sbjct: 90  RPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVS 149

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           ++ KM   G +P   T+ T                                    L+   
Sbjct: 150 VWGKMFKLGIQPDVITFTT------------------------------------LINGV 173

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C++  I+ A  +  +MV SG +PD ++YNTL       G T  A  +  +M+ N  +PN 
Sbjct: 174 CNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNV 233

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   I+   CK+  + DAM FL  M    + P+ + +NS++ G   +   +   +    
Sbjct: 234 VTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKR 293

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           ME+ G KPDVVT++ I+D+     L+    +   +MV  GI PD+  ++ +  G    G+
Sbjct: 294 MEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQ 353

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A  +   M + G  P+VV + T+I   C    +  AM    +M + GI PN  TY T
Sbjct: 354 LNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYST 413

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           +L G+    Q   A +L + M  + V P   T  ++ D     G+  EA+ V ++  E
Sbjct: 414 ILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTE 471



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 178/351 (50%), Gaps = 1/351 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++++G  P ++TYTT++  L    +    + L  K+E+ G KPD + +N +I++  +   
Sbjct: 329 MVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRL 388

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V++AM+   +M D G  P   TY+T++ G+ N+G+ +E+ +L + M   +NV PN  T++
Sbjct: 389 VNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMV-GRNVMPNTLTFS 447

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           ILV   C +  + EA  V   M   G++P+  TYN L   Y    +   A ++   M   
Sbjct: 448 ILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGK 507

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+  +  I+++GYC    M+ A   L +M   ++ PN V +N+++KG   +      
Sbjct: 508 GCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDA 567

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            +    M   G+ P ++T+S +++     G + +  ++F  M +  +EPDI +++IL +G
Sbjct: 568 QELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEG 627

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
               G+ + A+ + + +   G+ P    +  +I G         A  ++ K
Sbjct: 628 MFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRK 678



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 117/265 (44%), Gaps = 37/265 (13%)

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS----------------------- 256
           +++DA+   YRM  +   P++V F   +     +K                         
Sbjct: 73  SVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLN 132

Query: 257 ---------DGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
                    + VD A+++   M + G++PDV+TF+T+++   + G +    E++++MV++
Sbjct: 133 ILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRS 192

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G EPD+  ++ L  G   +G    A  +   M + G  PNVV + T+I   C    +  A
Sbjct: 193 GHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDA 252

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           M    +M   GI P+  TY +++ G     Q   A  L + ME+ G +P   T  ++ DS
Sbjct: 253 MDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDS 312

Query: 425 WRAIGLAREAKRVLKSAEEDRQSMP 449
                L  +A   L  +E   Q +P
Sbjct: 313 LYKDRLVNDAADFL--SEMVDQGIP 335



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 45/91 (49%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G   EA  +F  + E+   P +I YT L+  +    + +    L SK+  DG+
Sbjct: 590 LNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGI 649

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           +P    +N MI    + G  DEA ++F+K K
Sbjct: 650 QPPGRTYNVMIKGLLKEGLSDEAYELFRKWK 680


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 215/413 (52%), Gaps = 1/413 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  + + +++ G +P L+TY  +V  L ++      LSL+ K+EK  ++ D +++N
Sbjct: 200 KASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 259

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I+   +  ++D+A  +F KM+  G +P   TYN+LI    N G+  ++ +LL  M + 
Sbjct: 260 TIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIER 319

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K + PN  T++ L+ A+  +  + EA  +  +M+   I PD  TY++L   +  +     
Sbjct: 320 K-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A+ M   M +    PN  T   ++ G+CK   +E+ M     M +  +  N V +N+LI+
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G     D D   K    M   GV PD++T+S ++D     G + K   +F+ + K+ +EP
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           DI+ ++I+ +G  +AG+ +    +  S+   GV PNV+++TT+ISG+C     + A +++
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            +M E G  P+   Y TL+           + EL++ M   G     STI +V
Sbjct: 559 REMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 611



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 212/425 (49%), Gaps = 1/425 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G+ P ++T ++L+      KR    ++L+ ++ + G KPD++ FN +I+       
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNK 200

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             EA+ +  +M   GC+P   TY  ++ G    G  + +L LL+ M + K ++ +   YN
Sbjct: 201 ASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGK-IEADVVIYN 259

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++   C    I++A+ +  KM   GI+PD  TYN+L      YG    A ++L  M   
Sbjct: 260 TIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIER 319

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           ++ PN  T   ++  + KEG + +A +    M +  + P++  ++SLI GF      D  
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
                LM      P+VVT++T++  +  A  + +  E+F +M + G+  +   ++ L +G
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             +AG+   A+ I   M   GV P+++ ++ ++ G C   K+++A+ ++E + +  + P+
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + TY  ++ G  +A +     +L   +  KGV+P       +   +   GL  EA  + +
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 559

Query: 440 SAEED 444
             +ED
Sbjct: 560 EMKED 564



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/437 (25%), Positives = 218/437 (49%), Gaps = 1/437 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  +A  +F  +++    P+++ +  L++A+ + K+F  ++SL  +++   +  D   +N
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +IN       +  A+ +  KM   G +P   T ++L+ GY +  +  +++ L+  M + 
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE- 178

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
              KP+  T+N L+      N   EA  +V +MV  G QPD VTY  +     + G+   
Sbjct: 179 MGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDL 238

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  +L +M+  ++  +      I+ G CK  +++DA     +M+   + P++  +NSLI 
Sbjct: 239 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLIS 298

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
              +        + L+ M E  + P+VVTFS ++DA+   G + + ++++D+M+K  I+P
Sbjct: 299 CLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           DI  +S L  G+       +A+ +   M      PNVV + T+I G+C A +++  M ++
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            +M + G+  N  TY TL+ G  +A     A+++ + M   GV P   T  ++ D     
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478

Query: 429 GLAREAKRVLKSAEEDR 445
           G   +A  V +  ++ +
Sbjct: 479 GKLEKALVVFEYLQKSK 495



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 181/343 (52%), Gaps = 3/343 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +FN +  +G RP + TY +L++ L    R+     L+S + +  + P+ + F+A+I
Sbjct: 273 DAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALI 332

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +A  + G + EA K++ +M      P   TY++LI G+    + +E+  + +LM   K+ 
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS-KDC 391

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PN  TYN L++ +C    +EE   +  +M   G+  + VTYNTL +   Q G+   A++
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  +M ++ V P+  T  I++ G CK G +E A+     +++ ++ P++  +N +I+G  
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511

Query: 252 DI-KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
              K  DG D   +L  + GVKP+V+ ++T++  +   GL  +   +F +M + G  PD 
Sbjct: 512 KAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDS 570

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
             ++ L +  +R G+   +  ++  MR  G   +    + VI+
Sbjct: 571 GCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 153/316 (48%), Gaps = 1/316 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  +A  + + +IE    P ++T++ L+ A  ++ +      L  ++ K  +
Sbjct: 297 ISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   ++++IN       +DEA  +F+ M    C P   TYNTLIKG+    + EE ++
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + MSQ + +  N  TYN L++        + A  +  KMV+ G+ PD +TY+ L    
Sbjct: 417 LFREMSQ-RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +YG+  +A  +   +Q +++ P+  T  I++ G CK G +ED       +    V PN+
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +++ ++I GF      +  D     M+E G  PD   ++T++ A    G      E+  +
Sbjct: 536 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKE 595

Query: 301 MVKAGIEPDIHVFSIL 316
           M   G   D    S++
Sbjct: 596 MRSCGFVGDASTISMV 611


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 216/413 (52%), Gaps = 1/413 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  + + ++  G +P L TY T+V  L ++      LSL+ K+EK  ++ + +++N
Sbjct: 201 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYN 260

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I+   +  ++D+A  +F KM+  G KP   TYN+LI    N G+  ++ +LL  M + 
Sbjct: 261 TIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIER 320

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K + PN  T+N L+ A+  +  + EA  +  +M+   I P+ VTYN+L   +  +     
Sbjct: 321 K-INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 379

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A+Q+   M +    P+  T   ++ G+CK   +E+ M     M +  +  N V +N+LI+
Sbjct: 380 AQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 439

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G     D D   K    M   GV PD++T+S ++D     G + K   +F+ + K+ +EP
Sbjct: 440 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 499

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           +I+ ++I+ +G  +AG+ +    +  S+   GV PNV+++TT+ISG+C     + A +++
Sbjct: 500 NIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 559

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            +M E G  P+   Y TL+           + EL++ M   G     STI +V
Sbjct: 560 REMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 612



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 218/425 (51%), Gaps = 1/425 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G+ P ++T ++L+      KR    ++L+ ++ + G KPD++ FN +I+       
Sbjct: 142 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNK 201

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             EA+ +  +M   GC+P   TY T++ G    G  + +L LL+ M + K ++ N   YN
Sbjct: 202 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK-IEANVVIYN 260

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++   C    +++A+++  KM   GI+PD  TYN+L      YG    A ++L +M   
Sbjct: 261 TIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIER 320

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           ++ PN  T   ++  + KEG + +A +    M +  + PN+V +NSLI GF      D  
Sbjct: 321 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 380

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            +  TLM      PDVVT++T++  +  A  + +  E+F +M + G+  +   ++ L +G
Sbjct: 381 QQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 440

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             +AG+   A+ I   M   GV P+++ ++ ++ G C   K+++A+ ++E + +  + PN
Sbjct: 441 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPN 500

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + TY  ++ G  +A +     +L   +  KGV+P       +   +   GL  EA  + +
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 560

Query: 440 SAEED 444
             +ED
Sbjct: 561 EMKED 565



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 205/402 (50%), Gaps = 1/402 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  + + ++E G++P  +T+ TL+  L    +    ++LI ++   G +PD   +  ++
Sbjct: 169 EAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 228

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N   + G++D A+ + +KM+    +     YNT+I G       +++  L   M + K +
Sbjct: 229 NGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKM-ETKGI 287

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KP+  TYN L+   C+     +A  ++  M+   I P+ VT+N+L  A+A+ G+   AE+
Sbjct: 288 KPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEK 347

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  EM    + PN  T   +++G+C    +++A +    M   +  P++V +N+LIKGF 
Sbjct: 348 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFC 407

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
             K  +   +    M + G+  + VT++T++     AG     Q+IF  MV  G+ PDI 
Sbjct: 408 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 467

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            +SIL  G  + G+ +KA  +   ++K  + PN+  +  +I G C A K++    ++  +
Sbjct: 468 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSL 527

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
              G+ PN+  Y T++ G+        A+ L + M+E G  P
Sbjct: 528 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 569



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 225/442 (50%), Gaps = 2/442 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  +A  +F  +++    P++I ++ L++A+ +  +F  ++SL  +++  G+  +   ++
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            ++N       +  A+ +  KM   G +P   T ++L+ GY +  +  E++ L+  M + 
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVE- 179

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
              KP+  T+N L+      N   EA  ++ +MVA G QPD  TY T+     + G+   
Sbjct: 180 MGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 239

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  +L +M+  ++  N      I+ G CK  +M+DA     +M+   + P++  +NSLI 
Sbjct: 240 ALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLIS 299

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
              +        + L+ M E  + P+VVTF++++DA++  G + + +++FD+M++  I+P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 359

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           +I  ++ L  G+       +A+ I T M      P+VV + T+I G+C A +++  M ++
Sbjct: 360 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELF 419

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            +M + G+  N  TY TL+ G  +A     A+++ + M   GV P   T  ++ D     
Sbjct: 420 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 479

Query: 429 GLAREAKRVLKSAEEDRQSMPN 450
           G   +A  V +  ++ +   PN
Sbjct: 480 GKLEKALVVFEYLQKSKME-PN 500



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 182/343 (53%), Gaps = 3/343 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +FN +  +G +P + TY +L++ L    R+     L+S + +  + P+ + FN++I
Sbjct: 274 DAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLI 333

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +A ++ G + EA K+F +M      P   TYN+LI G+    + +E+ ++  LM   K+ 
Sbjct: 334 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS-KDC 392

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  TYN L++ +C    +EE   +  +M   G+  + VTYNTL +   Q G+   A++
Sbjct: 393 LPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 452

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  +M ++ V P+  T  I++ G CK G +E A+     +++ ++ PN+  +N +I+G  
Sbjct: 453 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMC 512

Query: 252 DI-KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
              K  DG D   +L  + GVKP+V+ ++T++  +   GL  +   +F +M + G  PD 
Sbjct: 513 KAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDS 571

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
             ++ L +  +R G+   +  ++  MR  G   +    + VI+
Sbjct: 572 GCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 614



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 154/316 (48%), Gaps = 1/316 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  +A  + + +IE    P ++T+ +L+ A  ++ +      L  ++ +  +
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 357

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +N++IN       +DEA +IF  M    C P   TYNTLIKG+    + EE ++
Sbjct: 358 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGME 417

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + MSQ + +  N  TYN L++        + A  +  KMV+ G+ PD +TY+ L    
Sbjct: 418 LFREMSQ-RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 476

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +YG+  +A  +   +Q +++ PN  T  I++ G CK G +ED       +    V PN+
Sbjct: 477 CKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 536

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +++ ++I GF      +  D     M+E G  PD   ++T++ A    G      E+  +
Sbjct: 537 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKE 596

Query: 301 MVKAGIEPDIHVFSIL 316
           M   G   D    S++
Sbjct: 597 MRSCGFVGDASTISMV 612



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 87/191 (45%)

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
           E  ++DA+     M +    P+++ F+ L+     +   D V      M+  G+  +  T
Sbjct: 59  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           +S +++ +     +     +   M+K G EPDI   S L  GY       +A +++  M 
Sbjct: 119 YSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMV 178

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
           + G  P+ V F T+I G     K   A+++ ++M   G  P+L TY T++ G  +     
Sbjct: 179 EMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 238

Query: 398 RAEELLQVMEE 408
            A  LL+ ME+
Sbjct: 239 LALSLLKKMEK 249


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 240/440 (54%), Gaps = 1/440 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   + +  +N ++++   P ++TY +++AAL + +     + +++ + K G+
Sbjct: 95  INGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV 154

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + +N++++    SG   EA+   +KM+  G +P   TYN+L+      G+  E+ K
Sbjct: 155 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARK 214

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M++ + +KP   TY  L++ + +K ++ E   ++  MV +GI P+   ++ L  AY
Sbjct: 215 IFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 273

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+  +   A  +  +M+   + PN  T G ++   CK G +EDAM +  +M +  + P  
Sbjct: 274 AKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 333

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +V+NSLI G       +  ++ +  M + G+  + + F++I+D+    G + + +++FD 
Sbjct: 334 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 393

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ G++PDI  +S L  GY  AG+  +A  +L SM   G+ P+ V ++T+I+G+C   +
Sbjct: 394 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISR 453

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ A+ ++ +M   G++P++ TY  +L G  + ++   A+EL   + + G + + ST  +
Sbjct: 454 MKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNI 513

Query: 421 VADSWRAIGLAREAKRVLKS 440
           +        L  +A R+ ++
Sbjct: 514 ILHGLCKNKLTDDALRMFQN 533



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/468 (24%), Positives = 215/468 (45%), Gaps = 36/468 (7%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +   +++ G  P  +TY ++V       + K  +  + K+  DG++PD + +N+++
Sbjct: 141 KAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLM 200

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   ++G   EA KIF  M   G KP  +TY TL++GY   G   E   LL LM ++  +
Sbjct: 201 DYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GI 259

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY------------------ 173
            PN   ++ILV A+  +  +EEA  V  KM   G+ P+AVTY                  
Sbjct: 260 HPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 319

Query: 174 -----------------NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
                            N+L        +  RAE+++ EM +  +  N      I+  +C
Sbjct: 320 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 379

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           KEG + ++ +    M  + V P+++ +++LI G+      D   K L  M   G+KPD V
Sbjct: 380 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 439

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T+ST+++ +     M     +F +M  +G+ PDI  ++I+ +G  +      A+ +   +
Sbjct: 440 TYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 499

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
            K G    +  +  ++ G C       A+ +++ +C + +    +T+  ++    +  + 
Sbjct: 500 TKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRN 559

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
             A++L       G+ P   T +L+A++    GL  E  ++  S E++
Sbjct: 560 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDN 607



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 174/357 (48%), Gaps = 4/357 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + IL   G+  +A   F  +I+EG  P  I Y +L+  L    +++    LI ++   G+
Sbjct: 305 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 364

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             ++I FN++I++  + G V E+ K+F  M   G KP   TY+TLI GY   GK +E+ K
Sbjct: 365 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 424

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M     +KP+  TY+ L+  +C  + +++A  +  +M +SG+ PD +TYN + +  
Sbjct: 425 LLASMVS-VGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGL 483

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q   T  A+++   +  +  +    T  II+ G CK    +DA+R    +  +++    
Sbjct: 484 FQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEA 543

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FN +I   L +  +D            G+ P+  T+  + +     GL+ +  ++F  
Sbjct: 544 RTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLS 603

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM--RKYGVHPNVV-MFTTVISG 354
           M   G   D  + + + +  ++ GE  +A + L+ +  + + +  +   +F  ++SG
Sbjct: 604 MEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG 660



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/290 (20%), Positives = 133/290 (45%), Gaps = 5/290 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  E+  +F+ ++  G +P +ITY+TL+       +      L++ +   GMKPD + 
Sbjct: 381 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 440

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +IN   +   + +A+ +F++M+ SG  P   TYN +++G     +   + +L   ++
Sbjct: 441 YSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 500

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +    +    TYNI++   C     ++A  +   +    ++ +A T+N +  A  + G  
Sbjct: 501 KSGR-QLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRN 559

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+ +     +N + PN  T  ++      +G +E+  +    M++     +  + N +
Sbjct: 560 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFI 619

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           ++  L   +       L++++E     +  T S  +D  S     GK QE
Sbjct: 620 VRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG----GKYQE 665


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 214/425 (50%), Gaps = 17/425 (4%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           Y  ++  L +  R    + +  K+ +  + PDS  +  +I+  +++G +++A  +FQK+ 
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLL 350

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
            SG  P+T  Y +LI G       +++ +L   M++ +   P+  TYN+++ A C +  +
Sbjct: 351 HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNR-RGCPPSPVTYNVMIDASCKRGML 409

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           EEA +++ KM+  G  PD VTYNT+     +      A  +  EM+     PN R+   I
Sbjct: 410 EEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTI 469

Query: 212 VSGYCKE---------GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           + G C++         G +++A R L RM +    P++V +++LI G   I   D     
Sbjct: 470 ILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 529

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           L  M +   KP VVT +T++     AG + + +E+ D MV +G  PD+  ++ L  G+ R
Sbjct: 530 LEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCR 589

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           AG+ ++A  +L+ M   G+ PNVV +T ++SG C A ++  A  ++ +M   G  PNL T
Sbjct: 590 AGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFT 649

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA-------DSWRAIGLAREAK 435
           Y  L+ G+  A Q     +L   M   G+ P       +A        S RA+ + RE +
Sbjct: 650 YTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGR 709

Query: 436 RVLKS 440
             L+S
Sbjct: 710 ESLRS 714



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 187/381 (49%), Gaps = 16/381 (4%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   EA  +   +IE+GH P ++TY T++  L +  R +  L L +++E+ G  P+   
Sbjct: 406 RGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRS 465

Query: 67  FNAMI-NACSES--------GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            N +I   C +S        G +DEA ++ ++M D G  P   TY+TLI G  ++ + ++
Sbjct: 466 HNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDD 525

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +  LL+ M + +  KP   T N L+   C    I+EA  V+  MV+SG  PD VTYNTL 
Sbjct: 526 ARHLLEDMVK-RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 584

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
             + + G+T RA ++L +M    + PN  T   +VSG CK   + +A     +MK     
Sbjct: 585 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 644

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           PNL  + +LI GF      DG  K    M   G+ PD V + T+      +G   +  EI
Sbjct: 645 PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 704

Query: 298 F----DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
                + +       +++ F++   G + AG+ + A   +  M + G  P      ++++
Sbjct: 705 LREGRESLRSEAWGDEVYRFAV--DGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVA 762

Query: 354 GWCNAVKMQRAMSIYEKMCEI 374
           G C + +   A ++ E++ ++
Sbjct: 763 GLCKSGQGGEARAVLEEIMDL 783



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 178/376 (47%), Gaps = 10/376 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK ++A  +F  L+  G  P+ + YT+L+  L     F     L + + + G  P 
Sbjct: 333 LAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPS 392

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N MI+A  + G ++EA  + +KM + G  P   TYNT++ G     + EE+L L  
Sbjct: 393 PVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFN 452

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSI---------EEAWNVVYKMVASGIQPDAVTYN 174
            M +     PN R++N ++   C ++ I         +EA+ ++ +M   G  PD VTY+
Sbjct: 453 EMER-LGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYS 511

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           TL            A  +L +M   Q +P   T   ++ G CK G +++A   L  M   
Sbjct: 512 TLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSS 571

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
              P++V +N+L+ G      ++   + L+ M   G+ P+VVT++ ++     A  + + 
Sbjct: 572 GQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA 631

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
             +F  M  +G  P++  ++ L  G+  AG+      +   M   G+ P+ V++ T+ + 
Sbjct: 632 CGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAE 691

Query: 355 WCNAVKMQRAMSIYEK 370
            C + +  RA+ I  +
Sbjct: 692 LCKSGRSARALEILRE 707



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/467 (23%), Positives = 208/467 (44%), Gaps = 51/467 (10%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  IF+ L+EE H P    Y  L+ +L++++  +++  ++  +   G  PDS  F
Sbjct: 24  GRTFEAVKIFS-LMEECHSPYPDVYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTF 82

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             ++    ++G +DEA  +  +M+     P  +T + L       G  E + +LL++M  
Sbjct: 83  TTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPV 142

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM------VASGI--------------- 166
                 N   YNI+V A C    +++A  +   M      +A+G                
Sbjct: 143 -----ANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRID 197

Query: 167 -----------QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
                      +P  VT N L   +   G+  +A ++L  M + +  P+E +   ++ G 
Sbjct: 198 EALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGL 257

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF----LDIKDSDGVDKALTLME---E 268
           CK G +E+A+R L+  +EL    +       ++G+    L +  +D +D+A+ + E   E
Sbjct: 258 CKAGRVEEAVR-LFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNE 316

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
             V PD  ++  ++D  + AG +   + +F  ++ +G+ P    ++ L  G   A     
Sbjct: 317 RNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDD 376

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  +   M + G  P+ V +  +I   C    ++ A  + +KM E G  P++ TY T++ 
Sbjct: 377 ARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 436

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           G  ++ +   A  L   ME  G  P + +   +      +GL +++K
Sbjct: 437 GLCKSSRVEEALLLFNEMERLGCTPNRRSHNTI-----ILGLCQQSK 478



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/432 (22%), Positives = 189/432 (43%), Gaps = 19/432 (4%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
            Y  +V AL +  R    L L   + +  +   +   ++++    +SG +DEA++++++ 
Sbjct: 147 AYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYREN 206

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
           +    +P   T N L++G+ + G+ +++ +LL+ M  D+   P++ +Y  ++   C    
Sbjct: 207 RR---EPCLVTLNVLLEGFCSRGQVDKARELLRAMP-DEECAPDEVSYCTVLDGLCKAGR 262

Query: 151 IEEAWNVV------YKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +EEA  +           +S   P    YN +     Q      A QM  +M    V P+
Sbjct: 263 VEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPD 322

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             + GI++ G  K G + DA     ++    V P+ V + SLI G       D   +   
Sbjct: 323 SWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFA 382

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M   G  P  VT++ ++DA    G++ +  ++   M++ G  PD+  ++ +  G  ++ 
Sbjct: 383 DMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSS 442

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV---------KMQRAMSIYEKMCEIG 375
             ++A  +   M + G  PN     T+I G C            K+  A  + ++M + G
Sbjct: 443 RVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDG 502

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
             P++ TY TL+ G     +   A  LL+ M ++  +P   T   +       G  +EA+
Sbjct: 503 HVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAR 562

Query: 436 RVLKSAEEDRQS 447
            VL +     QS
Sbjct: 563 EVLDAMVSSGQS 574



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 103/428 (24%), Positives = 175/428 (40%), Gaps = 48/428 (11%)

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           + G+ P  +LF ++I      G   EA+KIF  M++    P    YN LI       + E
Sbjct: 3   QQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECH-SPYPDVYNVLIDSLSKRQETE 61

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
              K++Q+M  D+   P+  T+  ++   C    ++EA  V+ +M +  I P   T + L
Sbjct: 62  AVKKMVQVMV-DRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFL 120

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRP--NERTCGIIVSGYCKEGNMEDAMRFLYRMKE- 233
           A      G   RA Q+L      ++ P  N     I+V   CK   ++DA+     M E 
Sbjct: 121 AHELCLRGSMERAFQLL------EIMPVANSSAYNIVVVALCKAARVDDALELARTMSEK 174

Query: 234 -------------------------LEVH------PNLVVFNSLIKGFLDIKDSDGVDKA 262
                                    L+V+      P LV  N L++GF      D   + 
Sbjct: 175 RIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKAREL 234

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD------MVKAGIEPDIHVFSIL 316
           L  M +    PD V++ T++D    AG + +   +F D         +   P +  ++I+
Sbjct: 235 LRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIV 294

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G  +     +A  +   M +  V P+   +  +I G   A K+  A ++++K+   G+
Sbjct: 295 ILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGV 354

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            P+   Y +L+ G   A     A EL   M  +G  P   T  ++ D+    G+  EA  
Sbjct: 355 TPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACD 414

Query: 437 VLKSAEED 444
           ++K   ED
Sbjct: 415 LIKKMIED 422


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 217/415 (52%), Gaps = 1/415 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  + + +++ G +P L+TY  +V  L ++      L+L++K+E   ++ D ++FN
Sbjct: 167 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 226

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I++  +  +VD+A+ +F++M+  G +P   TY++LI    + G+  ++ +LL  M + 
Sbjct: 227 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE- 285

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K + PN  T+N L+ A+  +    EA  +   M+   I PD  TYN+L   +  +    +
Sbjct: 286 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 345

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A+QM   M +    P+  T   ++ G+CK   +ED       M    +  + V + +LI+
Sbjct: 346 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 405

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G     D D   K    M   GV PD++T+S ++D   + G + K  E+FD M K+ I+ 
Sbjct: 406 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 465

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           DI++++ + +G  +AG+      +  S+   GV PNVV + T+ISG C+   +Q A ++ 
Sbjct: 466 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 525

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           +KM E G  PN  TY TL+  +        + EL++ M         STI LVA+
Sbjct: 526 KKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 580



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 218/434 (50%), Gaps = 8/434 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G+ P+++T ++L+      KR    ++L+ ++ + G +PD+I F  +I+       
Sbjct: 108 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 167

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             EA+ +  +M   GC+P   TY  ++ G    G  + +L LL  M   K ++ +   +N
Sbjct: 168 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK-IEADVVIFN 226

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++ + C    +++A N+  +M   GI+P+ VTY++L      YG    A Q+L +M   
Sbjct: 227 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 286

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           ++ PN  T   ++  + KEG   +A +    M +  + P++  +NSL+ GF      D +
Sbjct: 287 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC---MHDRL 343

Query: 260 DKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           DKA  + E    K   PDVVT++T++  +  +  +    E+F +M   G+  D   ++ L
Sbjct: 344 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 403

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
            +G    G+   A+ +   M   GV P+++ ++ ++ G CN  K+++A+ +++ M +  I
Sbjct: 404 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 463

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
             ++  Y T++ G  +A +     +L   +  KGV+P   T   +     +  L +EA  
Sbjct: 464 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 523

Query: 437 VLKSAEEDRQSMPN 450
           +LK  +ED   +PN
Sbjct: 524 LLKKMKED-GPLPN 536



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 103/439 (23%), Positives = 206/439 (46%), Gaps = 42/439 (9%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  +A  +F  +++    P+++ +  L++A+ + K+F  ++SL  K+++  +      +N
Sbjct: 27  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +IN       +  A+ +  KM   G +P+  T ++L+ GY                   
Sbjct: 87  ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGY------------------- 127

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
                            C    I +A  +V +MV  G +PD +T+ TL      + +   
Sbjct: 128 -----------------CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 170

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  ++  M     +PN  T G++V+G CK G+ + A+  L +M+  ++  ++V+FN++I 
Sbjct: 171 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 230

Query: 249 GFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
                +    VD AL L   ME  G++P+VVT+S+++    S G      ++  DM++  
Sbjct: 231 SLCKYRH---VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 287

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           I P++  F+ L   +V+ G+  +AE +   M K  + P++  + ++++G+C   ++ +A 
Sbjct: 288 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 347

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            ++E M      P++ TY TL+ G+ ++K+     EL + M  +G+     T   +    
Sbjct: 348 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 407

Query: 426 RAIGLAREAKRVLKSAEED 444
              G    A++V K    D
Sbjct: 408 FHDGDCDNAQKVFKQMVSD 426



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 147/317 (46%), Gaps = 1/317 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  +A  + + +IE+   P L+T+  L+ A  ++ +F     L   + K  +
Sbjct: 264 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 323

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +N+++N       +D+A ++F+ M    C P   TYNTLIKG+    + E+  +
Sbjct: 324 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 383

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + MS  + +  +  TY  L++        + A  V  +MV+ G+ PD +TY+ L    
Sbjct: 384 LFREMSH-RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 442

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G+  +A ++   MQ ++++ +      ++ G CK G ++D       +    V PN+
Sbjct: 443 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 502

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N++I G    +        L  M+E G  P+  T++T++ A    G      E+  +
Sbjct: 503 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIRE 562

Query: 301 MVKAGIEPDIHVFSILA 317
           M       D     ++A
Sbjct: 563 MRSCRFVGDASTIGLVA 579


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 217/415 (52%), Gaps = 1/415 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  + + +++ G +P L+TY  +V  L ++      L+L++K+E   ++ D ++FN
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I++  +  +VD+A+ +F++M+  G +P   TY++LI    + G+  ++ +LL  M + 
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE- 323

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K + PN  T+N L+ A+  +    EA  +   M+   I PD  TYN+L   +  +    +
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A+QM   M +    P+  T   ++ G+CK   +ED       M    +  + V + +LI+
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G     D D   K    M   GV PD++T+S ++D   + G + K  E+FD M K+ I+ 
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           DI++++ + +G  +AG+      +  S+   GV PNVV + T+ISG C+   +Q A ++ 
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           +KM E G  PN  TY TL+  +        + EL++ M         STI LVA+
Sbjct: 564 KKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 218/434 (50%), Gaps = 8/434 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G+ P+++T ++L+      KR    ++L+ ++ + G +PD+I F  +I+       
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             EA+ +  +M   GC+P   TY  ++ G    G  + +L LL  M   K ++ +   +N
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK-IEADVVIFN 264

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++ + C    +++A N+  +M   GI+P+ VTY++L      YG    A Q+L +M   
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           ++ PN  T   ++  + KEG   +A +    M +  + P++  +NSL+ GF      D +
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC---MHDRL 381

Query: 260 DKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           DKA  + E    K   PDVVT++T++  +  +  +    E+F +M   G+  D   ++ L
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
            +G    G+   A+ +   M   GV P+++ ++ ++ G CN  K+++A+ +++ M +  I
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
             ++  Y T++ G  +A +     +L   +  KGV+P   T   +     +  L +EA  
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561

Query: 437 VLKSAEEDRQSMPN 450
           +LK  +ED   +PN
Sbjct: 562 LLKKMKED-GPLPN 574



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 103/439 (23%), Positives = 206/439 (46%), Gaps = 42/439 (9%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  +A  +F  +++    P+++ +  L++A+ + K+F  ++SL  K+++  +      +N
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +IN       +  A+ +  KM   G +P+  T ++L+ GY                   
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGY------------------- 165

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
                            C    I +A  +V +MV  G +PD +T+ TL      + +   
Sbjct: 166 -----------------CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  ++  M     +PN  T G++V+G CK G+ + A+  L +M+  ++  ++V+FN++I 
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 268

Query: 249 GFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
                +    VD AL L   ME  G++P+VVT+S+++    S G      ++  DM++  
Sbjct: 269 SLCKYRH---VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           I P++  F+ L   +V+ G+  +AE +   M K  + P++  + ++++G+C   ++ +A 
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            ++E M      P++ TY TL+ G+ ++K+     EL + M  +G+     T   +    
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445

Query: 426 RAIGLAREAKRVLKSAEED 444
              G    A++V K    D
Sbjct: 446 FHDGDCDNAQKVFKQMVSD 464



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 147/317 (46%), Gaps = 1/317 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  +A  + + +IE+   P L+T+  L+ A  ++ +F     L   + K  +
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +N+++N       +D+A ++F+ M    C P   TYNTLIKG+    + E+  +
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + MS  + +  +  TY  L++        + A  V  +MV+ G+ PD +TY+ L    
Sbjct: 422 LFREMSH-RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G+  +A ++   MQ ++++ +      ++ G CK G ++D       +    V PN+
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 540

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N++I G    +        L  M+E G  P+  T++T++ A    G      E+  +
Sbjct: 541 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIRE 600

Query: 301 MVKAGIEPDIHVFSILA 317
           M       D     ++A
Sbjct: 601 MRSCRFVGDASTIGLVA 617


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 215/413 (52%), Gaps = 7/413 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L   GK  EAH +   +   G+ P +++Y+ +V    + ++   +L L+ ++++ G+
Sbjct: 259 LHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGL 318

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP+   +N++I+   ++G V EA ++ + MK+    P    Y TLI G+G  G      K
Sbjct: 319 KPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYK 378

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M + K + P+  TY  ++   C    + EA  +  +M++ G++PD VTY  L   Y
Sbjct: 379 LFDEMKR-KKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGY 437

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + GE   A  +  +M    + PN  T   +V G CK G ++ A   L+ M E  + PN+
Sbjct: 438 CKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNV 497

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             +N+LI G   + +   +++A+ LMEE    G  PD +T++TIMDA+   G M K  E+
Sbjct: 498 CTYNALINGLCKVGN---IEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHEL 554

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
              M+  G++P I  F++L  G+  +G  +  E ++  M   G+ PN   F +++  +C 
Sbjct: 555 LRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCI 614

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
              M+  + IY+ M   G+ P+  TY  L+ G+ +A+    A  L + M EKG
Sbjct: 615 RNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKG 667



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 192/368 (52%), Gaps = 2/368 (0%)

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A ++F++  + G    T +YN ++     +GK +E+  LL  M    NV P+  +Y+++V
Sbjct: 236 AFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNV-PDVVSYSVIV 294

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
             +C    + +   ++ ++   G++P+  TYN++     + G    AEQ+L  M+N ++ 
Sbjct: 295 DGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIF 354

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+      ++SG+ K GN+    +    MK  ++ P+ V + S+I G           K 
Sbjct: 355 PDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKL 414

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
            + M   G+KPD VT++ ++D +  AG M +   + + MV+ G+ P++  ++ L  G  +
Sbjct: 415 FSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCK 474

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            GE   A  +L  M + G+ PNV  +  +I+G C    +++A+ + E+M   G  P+  T
Sbjct: 475 CGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTIT 534

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           Y T++  Y +  +  +A ELL++M +KG++P   T  ++ + +   G+  + +R++K   
Sbjct: 535 YTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWM- 593

Query: 443 EDRQSMPN 450
            D+  MPN
Sbjct: 594 LDKGIMPN 601



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 148/296 (50%), Gaps = 1/296 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  + N ++E+G  P ++TYT LV  L +         L+ ++ + G++P+   +
Sbjct: 441 GEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTY 500

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           NA+IN   + GN+++A+K+ ++M  +G  P T TY T++  Y  +G+  ++ +LL++M  
Sbjct: 501 NALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIM-L 559

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           DK ++P   T+N+L+  +C    +E+   ++  M+  GI P+A T+N+L + Y       
Sbjct: 560 DKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMR 619

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
              ++   M    V P+  T  I++ G+CK  NM++A      M E         +NSLI
Sbjct: 620 ATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLI 679

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           KGF   K  +   K    M   G   +   +   +D     G      E+ D+ ++
Sbjct: 680 KGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIE 735



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 167/358 (46%), Gaps = 2/358 (0%)

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
           ++    KD G  P    ++   +     G   E+ KL   +     +   D     L R 
Sbjct: 169 RLIYTYKDWGAHPLV--FDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARL 226

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
             S + I  A+ V  +    G+  + V+YN +     Q G+   A  +L +M+     P+
Sbjct: 227 SNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPD 286

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             +  +IV GYC+   +   ++ +  ++   + PN   +NS+I            ++ L 
Sbjct: 287 VVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLR 346

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
           +M+   + PD V ++T++  +  +G +    ++FD+M +  I PD   ++ +  G  +AG
Sbjct: 347 VMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAG 406

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           +  +A  + + M   G+ P+ V +T +I G+C A +M+ A S++ +M E G+ PN+ TY 
Sbjct: 407 KVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYT 466

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
            L+ G  +  +   A ELL  M EKG++P   T   + +    +G   +A ++++  +
Sbjct: 467 ALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMD 524



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 1/142 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN     G   +   +   ++++G  P   T+ +L+     +   ++ + +   +   G+
Sbjct: 574 MNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGV 633

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD+  +N +I    ++ N+ EA  + ++M + G   T ++YN+LIKG+    K EE+ K
Sbjct: 634 VPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARK 693

Query: 121 LLQLMSQDKNVKPNDRTYNILV 142
           L + M     +   +  Y+I V
Sbjct: 694 LFEEMRTHGFIAEKE-IYDIFV 714


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 121/485 (24%), Positives = 238/485 (49%), Gaps = 5/485 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G  P + +Y T++    +  R ++ L L+ ++   G  PD + +  +IN   +   
Sbjct: 256 MVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQ 315

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           VDEA ++  KM   GC+P   TY TL+ G+  VG  + +++L++ M++ +  +PN  TYN
Sbjct: 316 VDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTE-RGYRPNAITYN 374

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++  +C +N +E A  V+  M+ +G  PDA+ Y+T+   + + G+   A  +L +M   
Sbjct: 375 NIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRR 434

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
             RP+      ++   CK   ++ A   L     ++  P++V ++ LI      K     
Sbjct: 435 GCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEA 494

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
           +  L +M +    PDVVT+++++D    +  +     +FD M  AG+ PD+  +SI+   
Sbjct: 495 ESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHS 554

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           + +      A  +L  M++    P+VV ++ +I+G C A  + +A  ++++M   G  PN
Sbjct: 555 FCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPN 614

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           L TY TL+ G  +  +  +A E+L++M ++   P   T   + +         EA RVL+
Sbjct: 615 LVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLR 674

Query: 440 SAEEDRQSMPNKKDE-IAVESIHRKQNLSASNSTFLQIPGVVSSEHNGSSAAKIRSQIVL 498
              +D+  +P++      + ++ +  NL        ++      + N + A   R   V+
Sbjct: 675 EM-KDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEGQWNANGARLHR--FVI 731

Query: 499 RSDTV 503
           R D +
Sbjct: 732 RGDVL 736



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 215/453 (47%), Gaps = 43/453 (9%)

Query: 4    LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            LV  GK  +A  +   ++ +G  P ++TY++L+  L +  +     +L+ ++ + G  P+
Sbjct: 958  LVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPN 1017

Query: 64   SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             + +N +I+   + G +DEA  + ++M D GC+P   TY  L+  +   GK E+++ L++
Sbjct: 1018 IVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVE 1077

Query: 124  LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            +M + K   PN  TYN L+  +C K+ +E A  ++  M+  G  P+ V+YNT+     + 
Sbjct: 1078 VMVE-KGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKA 1136

Query: 184  GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
             + +    +L +M +N   P+  T   I+   CK   ++ A      ++E    PNLV +
Sbjct: 1137 TKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTY 1196

Query: 244  NSLIKGFLDIKDSDGVDKALTLMEEF----GVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            NSL+ G      S   D+A  L+ E     G  PD++T++T++D    +  + +  ++F 
Sbjct: 1197 NSLVHGLC---KSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFL 1253

Query: 300  DMVKAGIEPDIHVFSI-----------------------------------LAKGYVRAG 324
             M+  G+ PD   +SI                                   L  G+ + G
Sbjct: 1254 QMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTG 1313

Query: 325  EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
               KA  IL  +   G +P+VV F+  I       ++++A  + E M   G+ P+  TY 
Sbjct: 1314 NLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYN 1373

Query: 385  TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            TLL G+ +A     A +L +VM + G  P  +T
Sbjct: 1374 TLLKGFCDASLTEDAVDLFEVMRQCGCEPDNAT 1406



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 207/415 (49%), Gaps = 2/415 (0%)

Query: 27   PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
            P + TY+T+V +L +  +      L+  +   G  P+ + ++++++   ++G +DEA  +
Sbjct: 946  PDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATAL 1005

Query: 87   FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             Q+M  SGC P   TYNT+I G+  +G+ +E+  LL+ M  D   +PN  TY +L+ A+C
Sbjct: 1006 LQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMV-DGGCQPNVVTYTVLLDAFC 1064

Query: 147  SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                 E+A  +V  MV  G  P+  TYN+L   + +  E  RA Q+L  M      PN  
Sbjct: 1065 KCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVV 1124

Query: 207  TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
            +   +++G CK   + + +  L +M      P++V FN++I         D   +   L+
Sbjct: 1125 SYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLI 1184

Query: 267  EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV-KAGIEPDIHVFSILAKGYVRAGE 325
            +E G  P++VT+++++     +    + + +  +M  K G  PDI  ++ +  G  ++  
Sbjct: 1185 QESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKR 1244

Query: 326  PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
              +A  +   M   G+ P+ V ++ VIS  C    M  A ++ E M + G +P   TY T
Sbjct: 1245 VDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGT 1304

Query: 386  LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            L+ G+ +     +A E+LQ++  KG  P   T  +  D     G  R+A  +L++
Sbjct: 1305 LIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLET 1359



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 202/407 (49%), Gaps = 1/407 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L    +  EA  + + +I+ G +P +ITY TLV    R       + L+ K+ + G 
Sbjct: 307 INGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGY 366

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P++I +N +++      +++ A ++ Q M  +GC P    Y+T+I G+   GK  E+  
Sbjct: 367 RPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHD 426

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M + +  +P+    + L+ A C   +I+ A  ++   +     PD V Y+ L  A 
Sbjct: 427 LLEQMIR-RGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHAL 485

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      AE  L  M  N+  P+  T   +V G CK   + DA     RM+   V P++
Sbjct: 486 CKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDV 545

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V ++ +I  F    + D   K L  M+E    PDVVT+S +++    AG + K  ++F +
Sbjct: 546 VTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQE 605

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  G  P++  ++ L  G  +  + ++A  +L  MRK    P+ + +T +I+G CNA +
Sbjct: 606 MLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASR 665

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           ++ A  +  +M + G  P+  TY TLL    +       E+LL+ ME
Sbjct: 666 LEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEME 712



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 119/473 (25%), Positives = 219/473 (46%), Gaps = 35/473 (7%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+LV   +  +AH +F   IE       +TY+TL++   R  +      L  ++ + G+
Sbjct: 133 LNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGL 192

Query: 61  K----------------------------------PDSILFNAMINACSESGNVDEAMKI 86
           K                                  PDS+ +N MIN  S+S  +D+A+++
Sbjct: 193 KAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRL 252

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            ++M D+G  P   +YNT++ G+    + E +L LL+ M   +   P+  +Y  ++   C
Sbjct: 253 LEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVT-RGCPPDVVSYTTVINGLC 311

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
             + ++EA  V+ KM+  G QP+ +TY TL   + + G+   A +++ +M     RPN  
Sbjct: 312 KLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAI 371

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   I+  +C+  +ME A + L  M +    P+ + ++++I GF            L  M
Sbjct: 372 TYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQM 431

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              G +PDV   ST++DA   A  +   QE+    +     PD+  +SIL     +A   
Sbjct: 432 IRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRL 491

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +AES L  M K   +P+VV + +V+ G C + ++  A  ++++M   G+ P++ TY  +
Sbjct: 492 PEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIV 551

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           +  + +      A ++L+ M+E    P   T   + +     G   +A  V +
Sbjct: 552 IHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQ 604



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 199/417 (47%), Gaps = 9/417 (2%)

Query: 22   EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
            +EG+     T   L+ AL R KR K  L +     K    P+   F  +I+    +G++ 
Sbjct: 837  QEGYNHDTYTCNCLLQALLRLKRPKDALQVYRN--KLCCSPNMFTFTILIHGLCRAGDIG 894

Query: 82   EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
             A ++ ++M   G       +N +IKG  +  K + +L+L + M +  +  P+  TY+ +
Sbjct: 895  TAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTI 954

Query: 142  VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
            V +      +++A  +V  MV+ G  P+ VTY++L     + G+   A  +L  M  +  
Sbjct: 955  VDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGC 1014

Query: 202  RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
             PN  T   I+ G+CK G +++A   L  M +    PN+V +  L+  F     ++    
Sbjct: 1015 SPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIG 1074

Query: 262  ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
             + +M E G  P++ T+++++D +     + +  ++   M++ G  P++  ++ +  G  
Sbjct: 1075 LVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLC 1134

Query: 322  RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
            +A +  +   +L  M      P++V F T+I   C   ++  A  ++  + E G  PNL 
Sbjct: 1135 KATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLV 1194

Query: 382  TYETLLWGYGEAKQPWRAEELLQVMEEK-GVRPKKSTIQLVADSWRAIGLAREAKRV 437
            TY +L+ G  ++++  +AE LL+ M  K G  P   T   V D     GL + +KRV
Sbjct: 1195 TYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVID-----GLCK-SKRV 1245



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 171/352 (48%), Gaps = 35/352 (9%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            +++   K +   A  + + +I++G  P +++Y T++A L +  +    + L+ ++  +  
Sbjct: 1095 LDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNC 1154

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             PD + FN +I+A  ++  VD A ++F  +++SGC P   TYN+L+ G     + +++  
Sbjct: 1155 VPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEY 1214

Query: 121  LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            LL+ M++ +   P+  TYN ++   C    ++ A+ +  +M++ G+ PD VTY+ +  + 
Sbjct: 1215 LLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSL 1274

Query: 181  AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
             ++     A  +L  M  N   P   T G ++ G+CK GN++ A+  L            
Sbjct: 1275 CKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEIL------------ 1322

Query: 241  VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
                                    L+   G  PDVVTFS  +D  S  G + +  E+ + 
Sbjct: 1323 -----------------------QLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLET 1359

Query: 301  MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
            M++AG+ PD   ++ L KG+  A   + A  +   MR+ G  P+   +TT++
Sbjct: 1360 MLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLV 1411



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 88/401 (21%), Positives = 188/401 (46%), Gaps = 2/401 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G++  +     L+  L +  ++     L     +     D++ ++ +I+    +G +  
Sbjct: 120 DGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILP 179

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A ++F +M   G K     + ++++G  + G+  +++   + MS  K   P+  TYN ++
Sbjct: 180 AYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMS--KTCPPDSVTYNTMI 237

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
                 + +++A  ++ +MV +G  P+  +YNT+   + +      A  +L +M      
Sbjct: 238 NGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCP 297

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+  +   +++G CK   +++A R + +M +    PN++ + +L+ GF  + D DG  + 
Sbjct: 298 PDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVEL 357

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           +  M E G +P+ +T++ IM  +     M +  ++   M++ G  PD   +S +  G+ +
Sbjct: 358 VRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCK 417

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           AG+ ++A  +L  M + G  P+V   +T+I   C A  +  A  +      +   P++  
Sbjct: 418 AGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVA 477

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           Y  L+    +AK+   AE  L VM +    P   T   V D
Sbjct: 478 YSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVD 518



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 158/348 (45%), Gaps = 5/348 (1%)

Query: 79   NVDEAMKIFQ-KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT 137
            N D A+  F       G    T T N L++    + +P+++L   Q+        PN  T
Sbjct: 823  NGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDAL---QVYRNKLCCSPNMFT 879

Query: 138  YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
            + IL+   C    I  A+ ++ +M   G+  + + +N + +      +   A ++  EM+
Sbjct: 880  FTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEME 939

Query: 198  -NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
             +    P+  T   IV    K G ++DA R +  M      PN+V ++SL+ G       
Sbjct: 940  ESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKL 999

Query: 257  DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
            D     L  M   G  P++VT++TI+D     G + +   + ++MV  G +P++  +++L
Sbjct: 1000 DEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVL 1059

Query: 317  AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
               + + G+ + A  ++  M + G  PN+  + +++  +C   +++RA  +   M + G 
Sbjct: 1060 LDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGC 1119

Query: 377  NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             PN+ +Y T++ G  +A +      LL+ M      P   T   + D+
Sbjct: 1120 VPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDA 1167



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 154/341 (45%), Gaps = 36/341 (10%)

Query: 12   EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
            EA+ +   +++ G  P  ITY TL+    +       L ++  +   G  PD + F+  I
Sbjct: 1282 EANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFI 1341

Query: 72   NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
            +  S+ G + +A ++ + M  +G  P T TYNTL+KG+ +    E+++ L ++M Q    
Sbjct: 1342 DWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQ-CGC 1400

Query: 132  KPNDRTYNILVRAWCSKNSIEEAWNVVYK-MVASG----------------IQPDAVTYN 174
            +P++ TY  LV     K S ++    V K MV +G                ++ D     
Sbjct: 1401 EPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGC 1460

Query: 175  TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
             +   + + G    A ++   M    V       G+ V  + K+   E+    L+R+  L
Sbjct: 1461 AIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYV--FHKQ---EEQAFGLWRVMGL 1515

Query: 235  E-VHPNLVVFNSLI-----KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
            E V P+ V F SL+      G LD      VD+ +++  ++G++P V  FS ++D     
Sbjct: 1516 EGVEPDAVTFLSLLTMCCHAGLLDA----AVDEFVSISRDYGLEPGVDHFSCVIDLLGRL 1571

Query: 289  GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
            GL+ + +++   M+    +P    ++ L   Y   G+ ++A
Sbjct: 1572 GLVNEAEDL---MLGMPCKPSAATWNCLLSAYKICGDFERA 1609



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 4/103 (3%)

Query: 23   EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD-GMKPDSILFNAMINACSESGNVD 81
            EG  P  +T+ +L+          + +     + +D G++P    F+ +I+     G V+
Sbjct: 1516 EGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVN 1575

Query: 82   EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
            EA  +   M    CKP+ +T+N L+  Y   G  E +L++ +L
Sbjct: 1576 EAEDLMLGMP---CKPSAATWNCLLSAYKICGDFERALRVAEL 1615


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 203/433 (46%), Gaps = 6/433 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK  EA  +F+ +IE G     + Y  L+  L + +  +    L+ ++   G +PD
Sbjct: 55  LCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPD 114

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +I +N +++     G V EA + F  M   G  P    YN L+      GK  E+  L +
Sbjct: 115 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFK 174

Query: 124 LMSQ-DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
            M   D+ V P+  TYN L+  +C     +EA  +   ++A G  PD VTYN++    A+
Sbjct: 175 TMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLAR 234

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                 AE+M  +M ++   PN  T  I++SG+C+ GNM   +     M E    P++++
Sbjct: 235 KSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLL 294

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
            N++I      K  D   K L  M + G  PDVVT++ ++D      L+ K  E+F  MV
Sbjct: 295 CNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMV 354

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G  PDI  +S++  G  +  +   A  +   M +  + P+VV F  ++ G C A K+ 
Sbjct: 355 DNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLD 414

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A  + + M E  + P+  T  TL+ G    K+   A  L Q M EKG     +   ++ 
Sbjct: 415 EAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKG-----TVADVLP 469

Query: 423 DSWRAIGLAREAK 435
            +    GL RE K
Sbjct: 470 HNIVLAGLCREGK 482



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 202/426 (47%), Gaps = 3/426 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           + E+G  P ++TY+T+++ L +  +    L ++ ++ + G+ PD   +  +++    +G 
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           VDEA ++F KM + GC   T  YN LI G       E + KLL+ M+  K  +P++ TYN
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMAS-KGYEPDNITYN 119

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML--FEMQ 197
            ++   C    + EA      M + G  PD V YN L  A  + G+   A  +    +M 
Sbjct: 120 TILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMA 179

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
           + +V P+  T   ++ G+C+    ++AM+    +      P+ V +NS++ G     + D
Sbjct: 180 DRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMD 239

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
             ++    M + G  P+  T+S ++      G M +C E++++M +    PD+ + + + 
Sbjct: 240 EAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVI 299

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
               +A +   A  +L  M K G  P+VV +  ++ G C    + +A  ++  M + G  
Sbjct: 300 DMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCA 359

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           P++ +Y  +L G  +  +   A  L   M E+ + P   T  ++ D     G   EAK +
Sbjct: 360 PDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDL 419

Query: 438 LKSAEE 443
           L    E
Sbjct: 420 LDVMSE 425



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 203/414 (49%), Gaps = 5/414 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHR--PTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           ++ L  +GK  EA  +F  +     +  P LITY TL+    R ++    + L   V   
Sbjct: 157 LDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAK 216

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G  PD++ +N+++   +   N+DEA ++F+KM DSGC P  +TY+ ++ G+  VG     
Sbjct: 217 GYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARC 276

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           L+L + M++ K   P+    N ++   C    +++A  V+ +M   G  PD VTYN L  
Sbjct: 277 LELYEEMTE-KRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLD 335

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
              +     +A ++   M +N   P+  +  ++++G CK   + DA     RM E ++ P
Sbjct: 336 GLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVP 395

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           ++V FN L+ G       D     L +M E  V PD VT +T+M          +   +F
Sbjct: 396 DVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLF 455

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG--VHPNVVMFTTVISGWC 356
             MV+ G   D+   +I+  G  R G+  +A     SM K      P+VV +TT+++   
Sbjct: 456 QYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALI 515

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
            A ++ +A+  +++M   G  P+   Y TL+ G  +  +  +A+ L Q M+EKG
Sbjct: 516 EAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 569


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 209/392 (53%), Gaps = 2/392 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAAL-TRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           A  +   ++ +G  P + TY  LV AL  R +R +++  +   +   G  P+ + +N ++
Sbjct: 138 ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLV 197

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
            A   +G VD A ++   M++ G +P+  T+NT++ G    G+ E++ K+   M+++  +
Sbjct: 198 AAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMARE-GL 256

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  +YN LV  +C    + EA  V  +M   G+ PD VT+ +L  A  + G   RA  
Sbjct: 257 TPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVA 316

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           ++ +M+   +R NE T   ++ G+C+ G ++DA+  +  M+E  + P++V +N LI G+ 
Sbjct: 317 LVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYC 376

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
            +   D   + +  ME  G+KPDVVT+STI+  +   G      E+   M+K G+ PD  
Sbjct: 377 KLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAI 436

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            +S L +G         A  +   M + G+ P+   +TT+I G C    +Q+A+S++++M
Sbjct: 437 TYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEM 496

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
            + G+ P++ TY  L+ G  ++ +   A+ LL
Sbjct: 497 IKKGVLPDVVTYSVLIDGLSKSARTKEAQRLL 528



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 216/416 (51%), Gaps = 3/416 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G+ P+L+ Y  ++ AL+      S   L++ + +DG+ P+   +N ++ A    G  +EA
Sbjct: 115 GYAPSLLAYNAVLLALS-DASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 84  MKIF-QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           + +    M+ +GC P   TYNTL+  +   G+ + + +L+ +M ++  V+P+  T+N +V
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVM-REGGVRPSLVTFNTVV 232

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
              C    +E+A  +  +M   G+ PD V+YNTL   Y + G  + A  +  EM    V 
Sbjct: 233 NGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVV 292

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+  T   ++   C+ GN+E A+  + +M+E  +  N   F +LI GF      D    A
Sbjct: 293 PDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLA 352

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           +  M E  ++P VV ++ +++ +   G M + +E+  +M   G++PD+  +S +  GY +
Sbjct: 353 MKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCK 412

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G+   A  +   M K GV P+ + ++++I G C   ++  A  ++EKM ++G+ P+  T
Sbjct: 413 IGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFT 472

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           Y TL+ G+ +     +A  L   M +KGV P   T  ++ D        +EA+R+L
Sbjct: 473 YTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLL 528



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 194/364 (53%), Gaps = 1/364 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P ++TY TLVAA  R     +   L+  + + G++P  + FN ++N   ++G +++A
Sbjct: 185 GCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDA 244

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            K+F +M   G  P   +YNTL+ GY   G   E+L +   M+Q K V P+  T+  L+ 
Sbjct: 245 RKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQ-KGVVPDVVTFTSLIH 303

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           A C   ++E A  +V +M   G++ +  T+  L   + + G    A   + EM+  +++P
Sbjct: 304 AMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQP 363

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +     ++++GYCK G M++A   ++ M+   + P++V +++++ G+  I D+D   +  
Sbjct: 364 SVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELN 423

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M + GV PD +T+S+++        +G   E+F+ M++ G++PD   ++ L  G+ + 
Sbjct: 424 RKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKE 483

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G  QKA S+   M K GV P+VV ++ +I G   + + + A  +  K+      P+   Y
Sbjct: 484 GNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKY 543

Query: 384 ETLL 387
           E L+
Sbjct: 544 EALM 547



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/448 (23%), Positives = 214/448 (47%), Gaps = 18/448 (4%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+   A  +   + E G RP+L+T+ T+V  L +  R +    +  ++ ++G+ PD + +
Sbjct: 204 GEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSY 263

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +++   ++G + EA+ +F +M   G  P   T+ +LI      G  E ++ L+  M +
Sbjct: 264 NTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQM-R 322

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           ++ ++ N+ T+  L+  +C    +++A   + +M    IQP  V YN L   Y + G   
Sbjct: 323 ERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMD 382

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A +++ EM+   ++P+  T   I+SGYCK G+ + A     +M +  V P+ + ++SLI
Sbjct: 383 EARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLI 442

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           +G  + +      +    M + G++PD  T++T++D     G + K   + D+M+K G+ 
Sbjct: 443 RGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVL 502

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF---------------TTVI 352
           PD+  +S+L  G  ++   ++A+ +L  +      P+ + +                 ++
Sbjct: 503 PDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALL 562

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
            G+     M +A  +Y+ M +     +   Y  L+ G+       +A    + +   G  
Sbjct: 563 KGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFS 622

Query: 413 PKK-STIQLVADSWRAIGLAREAKRVLK 439
           P   STI LV   +   G+  EA  V++
Sbjct: 623 PNSTSTISLVRGLFEE-GMTVEADNVIQ 649



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 216/422 (51%), Gaps = 22/422 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  +A  +F+ +  EG  P  ++Y TLV+   +       L++ +++ + G+
Sbjct: 232 VNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGV 291

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + F ++I+A   +GN++ A+ +  +M++ G +    T+  LI G+   G  +++L 
Sbjct: 292 VPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALL 351

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            ++ M + + ++P+   YN+L+  +C    ++EA  ++++M A G++PD VTY+T+   Y
Sbjct: 352 AMKEMRECR-IQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGY 410

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+T  A ++  +M    V P+  T   ++ G C+E  + DA     +M +L + P+ 
Sbjct: 411 CKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDE 470

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             + +LI G    K+ + V KAL+L +E    GV PDVVT+S ++D  S +    + Q +
Sbjct: 471 FTYTTLIDG--HCKEGN-VQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRL 527

Query: 298 -----FDDMVKAGI--EPDIHVFSI--------LAKGYVRAGEPQKAESILTSMRKYGVH 342
                ++D V   I  E  +H            L KG+   G   +A+ +  SM      
Sbjct: 528 LFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWK 587

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
            +  +++ +I G C    + +A+S ++++   G +PN  +  +L+ G  E      A+ +
Sbjct: 588 LDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNV 647

Query: 403 LQ 404
           +Q
Sbjct: 648 IQ 649



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 122/281 (43%), Gaps = 35/281 (12%)

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           G  P  + YN +  A +       A ++L  M  + V PN  T  I+V   C  G  E+A
Sbjct: 115 GYAPSLLAYNAVLLALSD-ASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
                                     L +   D        M   G  P+VVT++T++ A
Sbjct: 174 --------------------------LGVVGDD--------MRGAGCAPNVVTYNTLVAA 199

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           +  AG +   + +   M + G+ P +  F+ +  G  +AG  + A  +   M + G+ P+
Sbjct: 200 FCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPD 259

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
            V + T++SG+C A  +  A++++ +M + G+ P++ T+ +L+     A    RA  L+ 
Sbjct: 260 GVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVG 319

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
            M E+G+R  + T   + D +   G   +A   +K   E R
Sbjct: 320 QMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECR 360


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 216/415 (52%), Gaps = 1/415 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  + + +++ G +P L+TY T+V  L ++      LSL+ K+EK  ++ D +++N
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I+   +  ++D+A+ +F +M + G +P   TY++LI    N G+  ++ +LL  M + 
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K + PN  T++ L+ A+  +  + EA  +  +M+   I PD  TY++L   +  +     
Sbjct: 323 K-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A+ M   M +    PN  T   ++ G+CK   +E+ M     M +  +  N V + +LI 
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           GF   +D D        M   GV P+++T++ ++D     G + K   +F+ + ++ +EP
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           DI+ ++I+ +G  +AG+ +    +  ++   GV PNV+ + T+ISG+C     + A S+ 
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           +KM E G  PN  TY TL+           + EL++ M   G     STI LV +
Sbjct: 562 KKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 211/431 (48%), Gaps = 2/431 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G+ P ++T ++L+      KR    ++L+ ++ + G KPD+  F  +I+       
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             EA+ +  +M   GC+P   TY T++ G    G  + +L LL+ M + K ++ +   YN
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGK-IEADVVIYN 262

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++   C    +++A N+  +M   GI+PD  TY++L      YG    A ++L +M   
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           ++ PN  T   ++  + KEG + +A +    M +  + P++  ++SLI GF      D  
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
                LM      P+VVT+ST++  +  A  + +  E+F +M + G+  +   ++ L  G
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           + +A +   A+ +   M   GVHPN++ +  ++ G C   K+ +AM ++E +    + P+
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + TY  ++ G  +A +     EL   +  KGV P       +   +   G   EA  +LK
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562

Query: 440 SAEEDRQSMPN 450
             +ED   +PN
Sbjct: 563 KMKED-GPLPN 572



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 215/427 (50%), Gaps = 6/427 (1%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  +A  +F  +++    P+++ +  L++A+ +  +F+ ++SL  +++  G+  D   ++
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
             IN       +  A+ +  KM   G +P   T ++L+ GY +  +  +++ L+  M + 
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE- 181

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
              KP+  T+  L+      N   EA  +V +MV  G QPD VTY T+     + G+   
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  +L +M+  ++  +      I+ G CK  +M+DA+     M    + P++  ++SLI 
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
              +        + L+ M E  + P+VVTFS ++DA+   G + + ++++D+M+K  I+P
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           DI  +S L  G+       +A+ +   M      PNVV ++T+I G+C A +++  M ++
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            +M + G+  N  TY TL+ G+ +A+    A+ + + M   GV P   T  ++ D     
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD----- 476

Query: 429 GLAREAK 435
           GL +  K
Sbjct: 477 GLCKNGK 483



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 149/309 (48%), Gaps = 1/309 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  +A  + + +IE    P ++T++ L+ A  ++ +      L  ++ K  +
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   ++++IN       +DEA  +F+ M    C P   TY+TLIKG+    + EE ++
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + MSQ + +  N  TY  L+  +      + A  V  +MV+ G+ P+ +TYN L    
Sbjct: 420 LFREMSQ-RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+  +A  +   +Q + + P+  T  I++ G CK G +ED       +    V PN+
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV 538

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +N++I GF      +  D  L  M+E G  P+  T++T++ A    G      E+  +
Sbjct: 539 IAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKE 598

Query: 301 MVKAGIEPD 309
           M   G   D
Sbjct: 599 MRSCGFAGD 607



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 128/300 (42%), Gaps = 36/300 (12%)

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           +++A ++   MV S   P  V +N L  A A+  +      +  +MQ   +  +  T  I
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
            ++ +C+   +  A+  L +M +L                                   G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKL-----------------------------------G 148

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
            +PD+VT S++++ +  +  +     + D MV+ G +PD   F+ L  G     +  +A 
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           +++  M + G  P++V + TV++G C    +  A+S+ +KM +  I  ++  Y T++ G 
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            + K    A  L   M+ KG+RP   T   +       G   +A R+L    E R+  PN
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE-RKINPN 327


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 216/417 (51%), Gaps = 2/417 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSIL-SLISKVEKDGMKPDSILFNAMINACSESGNVD 81
            G  P +++Y  ++ A  R KR  S   ++  ++ +  + P+   +N +I     +GN+D
Sbjct: 163 HGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNID 222

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
            A+ +F KM+  GC P   TYNTLI GY  + K ++  KLL+ M+  K ++PN  +YN++
Sbjct: 223 VALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMAL-KGLEPNLISYNVV 281

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +   C +  ++E   V+ +M   G   D VTYNTL + Y + G  ++A  M  EM  + +
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            P+  T   ++   CK GNM  AM FL +M+   + PN   + +L+ GF      +   +
Sbjct: 342 TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            L  M + G  P VVT++ +++     G M     + +DM + G+ PD+  +S +  G+ 
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           R+ +  +A  +   M + G+ P+ + ++++I G+C   + + A  +YE+M  +G+ P+  
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           TY  L+  Y       +A +L   M EKGV P   T  ++ +        REAKR+L
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 200/391 (51%), Gaps = 1/391 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F  ++E    P + TY  L+            L+L  K+E  G  P+ + +N +I+
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              +   +D+  K+ + M   G +P   +YN +I G    G+ +E   +L  M++ +   
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR-RGYS 307

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
            ++ TYN L++ +C + +  +A  +  +M+  G+ P  +TY +L  +  + G   RA + 
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           L +M+   + PNERT   +V G+ ++G M +A R L  M +    P++V +N+LI G   
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
               +     L  M+E G+ PDVV++ST++  +  +  + +   +  +MV+ GI+PD   
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           +S L +G+      ++A  +   M + G+ P+   +T +I+ +C    +++A+ ++ +M 
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           E G+ P++ TY  L+ G  +  +   A+ LL
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/496 (23%), Positives = 233/496 (46%), Gaps = 18/496 (3%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F+ +  +G  P ++TY TL+    + ++      L+  +   G++P+ I +N +IN   
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
             G + E   +  +M   G      TYNTLIKGY   G   ++L +   M +   + P+ 
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR-HGLTPSV 345

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY  L+ + C   ++  A   + +M   G+ P+  TY TL   ++Q G    A ++L E
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M +N   P+  T   +++G+C  G MEDA+  L  MKE  + P++V +++++ GF    D
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D   +    M E G+KPD +T+S+++  +       +  +++++M++ G+ PD   ++ 
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI-------- 367
           L   Y   G+ +KA  +   M + GV P+VV ++ +I+G     + + A  +        
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585

Query: 368 -------YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
                  Y  + E   N   K+  +L+ G+        A+++ + M  K  +P  +   +
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVV 480
           +       G  R+A  + K   +    +        V+++H++  ++  NS  + +  + 
Sbjct: 646 MIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHV--LR 703

Query: 481 SSEHNGSSAAKIRSQI 496
           S E + +  AK+  +I
Sbjct: 704 SCELSEAEQAKVLVEI 719



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 111/462 (24%), Positives = 220/462 (47%), Gaps = 22/462 (4%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  P LI+Y  ++  L R+ R K +  +++++ + G   D + +N +I    + GN  +
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+ +  +M   G  P+  TY +LI      G    +++ L  M + + + PN+RTY  LV
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM-RVRGLCPNERTYTTLV 387

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
             +  K  + EA+ V+ +M  +G  P  VTYN L   +   G+   A  +L +M+   + 
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+  +   ++SG+C+  ++++A+R    M E  + P+ + ++SLI+GF + + +    +A
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK---EA 504

Query: 263 LTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
             L EE    G+ PD  T++ +++A+   G + K  ++ ++MV+ G+ PD+  +S+L  G
Sbjct: 505 CDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLING 564

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS---------------GWCNAVKMQRA 364
             +    ++A+ +L  +      P+ V + T+I                G+C    M  A
Sbjct: 565 LNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEA 624

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             ++E M      P+   Y  ++ G+  A    +A  L + M + G      T+  +  +
Sbjct: 625 DQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKA 684

Query: 425 WRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNL 466
               G   E   V+       +    ++ ++ VE  HR+ N+
Sbjct: 685 LHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNM 726



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 190/389 (48%), Gaps = 14/389 (3%)

Query: 36  VAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGC 95
           VAA T    + S++    +   D     S +F+ ++ + S    +D+A+ I    +  G 
Sbjct: 106 VAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGF 165

Query: 96  KPTTSTYNTL----IKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
            P   +YN +    I+   N+   E   K + L SQ   V PN  TYNIL+R +C   +I
Sbjct: 166 MPGVLSYNAVLDATIRSKRNISFAENVFKEM-LESQ---VSPNVFTYNILIRGFCFAGNI 221

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           + A  +  KM   G  P+ VTYNTL   Y +  +     ++L  M    + PN  +  ++
Sbjct: 222 DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 281

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF-- 269
           ++G C+EG M++    L  M       + V +N+LIKG+          +AL +  E   
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYC---KEGNFHQALVMHAEMLR 338

Query: 270 -GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G+ P V+T+++++ +   AG M +  E  D M   G+ P+   ++ L  G+ + G   +
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  +L  M   G  P+VV +  +I+G C   KM+ A+++ E M E G++P++ +Y T+L 
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           G+  +     A  + + M EKG++P   T
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTIT 487



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 187/351 (53%), Gaps = 20/351 (5%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  H+A  +   ++  G  P++ITYT+L+ ++ +       +  + ++   G+ P+   
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +  +++  S+ G ++EA ++ ++M D+G  P+  TYN LI G+   GK E+++ +L+ M 
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM- 441

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++K + P+  +Y+ ++  +C    ++EA  V  +MV  GI+PD +TY++L + + +   T
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A  +  EM    + P+E T   +++ YC EG++E A++    M E  V P++V ++ L
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVK--PDVVTFSTIMDAWSS---------------AG 289
           I G    K S   +    L++ F  +  P  VT+ T+++  S+                G
Sbjct: 562 INGL--NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG 619

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           +M +  ++F+ M+    +PD   ++I+  G+ RAG+ +KA ++   M K G
Sbjct: 620 MMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 158/307 (51%), Gaps = 1/307 (0%)

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR-AEQMLFEM 196
           ++++V+++   + I++A ++V+   A G  P  ++YN +  A  +       AE +  EM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
             +QV PN  T  I++ G+C  GN++ A+    +M+     PN+V +N+LI G+  ++  
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           D   K L  M   G++P++++++ +++     G M +   +  +M + G   D   ++ L
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
            KGY + G   +A  +   M ++G+ P+V+ +T++I   C A  M RAM   ++M   G+
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            PN +TY TL+ G+ +      A  +L+ M + G  P   T   + +     G   +A  
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436

Query: 437 VLKSAEE 443
           VL+  +E
Sbjct: 437 VLEDMKE 443



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 110/269 (40%), Gaps = 49/269 (18%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++E+G +P  ITY++L+     Q+R K    L  ++ + G+ PD   + A+INA    G+
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ---------------- 123
           +++A+++  +M + G  P   TY+ LI G     +  E+ +LL                 
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT 595

Query: 124 ------------------------LMSQ---------DKNVKPNDRTYNILVRAWCSKNS 150
                                   +M++          KN KP+   YNI++   C    
Sbjct: 596 LIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGD 655

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           I +A+ +  +MV SG     VT   L +A  + G+      ++  +  +          +
Sbjct: 656 IRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKV 715

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           +V    +EGNM+  +  L  M +    PN
Sbjct: 716 LVEINHREGNMDVVLDVLAEMAKDGFLPN 744


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 210/415 (50%), Gaps = 1/415 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G+ P++  Y  ++ AL+      S    +S + + G+ P+   +N ++ A    G ++EA
Sbjct: 113 GYAPSVPAYNAVLLALS-DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +   M+ +GC P   TYNTL+  +   G+ + + +++ LM ++ N KPN  T+N +V 
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C    +E A  V  +MV  G+ PD V+YNTL   Y + G  + +  +  EM    + P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   ++   CK GN+E A+  + +M+E  +  N V F +LI GF      D    A+
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M + G++P VV ++ +++ +   G M   +E+  +M    ++PD+  +S +  GY + 
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G    A  +   M K GV P+ + ++++I G C   ++  A  ++E M ++G+ P+  TY
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            TL+ G+ +     +A  L   M  KGV P   T  ++ +        +EA R+L
Sbjct: 472 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLL 526



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 219/475 (46%), Gaps = 55/475 (11%)

Query: 2   NILV----GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NILV     +G+  EA  +   +   G  P  +TY TLVAA  R         ++S + +
Sbjct: 156 NILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMRE 215

Query: 58  DG-MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           +G  KP+ + FN+M+N   ++G ++ A K+F +M   G  P   +YNTL+ GY  VG   
Sbjct: 216 EGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLH 275

Query: 117 ESLKLLQLMSQ----------------------------------DKNVKPNDRTYNILV 142
           ESL +   M+Q                                  ++ ++ N+ T+  L+
Sbjct: 276 ESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALI 335

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
             +C K  +++A   V +M   GIQP  V YN L   Y + G    A +++ EM+  +V+
Sbjct: 336 DGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVK 395

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+  T   I+SGYCK GN++ A +   +M +  V P+ + ++SLI+G  + K  +   + 
Sbjct: 396 PDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACEL 455

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              M + GV+PD  T++T++D     G + K   + D+M++ G+ PD+  +S+L  G  +
Sbjct: 456 FENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSK 515

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMF---------------TTVISGWCNAVKMQRAMSI 367
           +   ++A  +L  +      P+ + +                 ++ G+C    M+ A  +
Sbjct: 516 SARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKV 575

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK-STIQLV 421
           Y+ M +     +   Y  L+ G+       +A    + M   G  P   STI LV
Sbjct: 576 YQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLV 630



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/422 (25%), Positives = 211/422 (50%), Gaps = 22/422 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+   A  +F+ ++ EG  P +++Y TL++   +       L++ S++ + G+
Sbjct: 230 VNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL 289

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + F ++I+A  ++GN+++A+ +  +M++ G +    T+  LI G+   G  +++L 
Sbjct: 290 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALL 349

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            ++ M +   ++P+   YN L+  +C    ++ A  ++ +M A  ++PD VTY+T+   Y
Sbjct: 350 AVEEMRK-CGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A Q+  +M    V P+  T   ++ G C+E  + DA      M +L V P+ 
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             + +LI G    K+ + V+KAL+L +E    GV PDVVT+S +++  S +    +   +
Sbjct: 469 FTYTTLIDGH--CKEGN-VEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 525

Query: 298 F-----DDMVKAGIEPDIHVFSI----------LAKGYVRAGEPQKAESILTSMRKYGVH 342
                 +D V   I+ D  +             L KG+   G  ++A+ +  SM      
Sbjct: 526 LFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWK 585

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
            +  +++ +I G C    +++A+S +++M   G +PN  +  +L+ G  E      A+  
Sbjct: 586 LDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNA 645

Query: 403 LQ 404
           +Q
Sbjct: 646 IQ 647



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 111/244 (45%), Gaps = 16/244 (6%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           ++A  +F  +++ G +P   TYTTL+    ++   +  LSL  ++ + G+ PD + ++ +
Sbjct: 450 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 509

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTL---------------IKGYGNVGKP 115
           IN  S+S    EA ++  K+      P    Y+ L               +KG+   G  
Sbjct: 510 INGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLM 569

Query: 116 EESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
           +E+ K+ Q M  D+N K +   Y+IL+   C   ++ +A +   +M+ SG  P++ +  +
Sbjct: 570 KEADKVYQSM-LDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTIS 628

Query: 176 LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
           L R   + G    A+  + ++       +      ++    KEGN++  +  L  M    
Sbjct: 629 LVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDG 688

Query: 236 VHPN 239
           + P+
Sbjct: 689 LLPS 692


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 212/393 (53%), Gaps = 5/393 (1%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A   F+ ++ +G  P + TY  LV AL  +   K  LS++  +   G  P+ + +N ++ 
Sbjct: 174 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVA 233

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
           A   +G VD A ++   M++ G KP   T+N+++ G    GK E++ K+   M ++  + 
Sbjct: 234 AFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVRE-GLA 292

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+  +YN LV  +C      EA +V  +M   GI PD VT+ +L     + G   RA  +
Sbjct: 293 PDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTL 352

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           + +M+   ++ NE T   ++ G+CK+G ++DA+  +  MK+  + P++V +N+LI G+  
Sbjct: 353 VRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCM 412

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +   D   + L  ME  G+KPDVVT+STI+ A+          E+   M++ G+ PD   
Sbjct: 413 VGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAIT 472

Query: 313 FSILAKGYVRAGEPQ--KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
           +S L +  V  GE +   A  +  +M K G+ P+   +T++I G C    ++ A+S+++K
Sbjct: 473 YSSLIR--VLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDK 530

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           M + G+ P++ TY  L+ G  ++ +   A++LL
Sbjct: 531 MVKAGVLPDVVTYSVLINGLSKSARAMEAQQLL 563



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 196/390 (50%), Gaps = 5/390 (1%)

Query: 2   NILV----GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NILV    G+G   EA  I   +   G  P ++TY TLVAA  R         L+  + +
Sbjct: 194 NILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMRE 253

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+KP+ + FN+M+N   ++G +++A K+F +M   G  P   +YNTL+ GY   G   E
Sbjct: 254 GGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHE 313

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +L +   M+Q K + P+  T+  L+   C   ++E A  +V +M   G+Q + VT+  L 
Sbjct: 314 ALSVFAEMTQ-KGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALI 372

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
             + + G    A   +  M+  +++P+      +++GYC  G M++A   L+ M+   + 
Sbjct: 373 DGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLK 432

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P++V ++++I  +    D+    +    M E GV PD +T+S+++        +     +
Sbjct: 433 PDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVL 492

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F +M+K G++PD   ++ L  G+ + G  + A S+   M K GV P+VV ++ +I+G   
Sbjct: 493 FKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSK 552

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           + +   A  +  K+      P    Y+ L+
Sbjct: 553 SARAMEAQQLLFKLYHEDPIPANTKYDALM 582



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 221/422 (52%), Gaps = 22/422 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +   GK  +A  +F+ ++ EG  P  ++Y TLV    +       LS+ +++ + G+
Sbjct: 267 VNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGI 326

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + F ++I+   ++GN++ A+ + ++M++ G +    T+  LI G+   G  +++L 
Sbjct: 327 MPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALL 386

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            ++ M Q + +KP+   YN L+  +C    ++EA  ++++M A G++PD VTY+T+  AY
Sbjct: 387 AVRGMKQCR-IKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAY 445

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +T+ A ++  +M    V P+  T   ++   C E  + DA      M +L + P+ 
Sbjct: 446 CKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDE 505

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             + SLI G    K+ + V+ AL+L   M + GV PDVVT+S +++  S +    + Q++
Sbjct: 506 FTYTSLIDGH--CKEGN-VESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQL 562

Query: 298 F-----DDMVKAGIEPD--IHVF------SILA--KGYVRAGEPQKAESILTSMRKYGVH 342
                 +D + A  + D  +H        S+LA  KG+   G   +A+ +  SM     +
Sbjct: 563 LFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWN 622

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
            +  +++ +I G C A  + +A+S +++M + G  PN  +  +L+ G  E      A+++
Sbjct: 623 LDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQV 682

Query: 403 LQ 404
           +Q
Sbjct: 683 IQ 684



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 162/324 (50%), Gaps = 2/324 (0%)

Query: 94  GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
           G  P+   YN ++    +      + +    M  D  V PN  TYNILVRA C +   +E
Sbjct: 151 GYVPSVLAYNAVLLALSDASL-TSARRFFDSMLSD-GVAPNVYTYNILVRALCGRGHRKE 208

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A +++  M  +G  P+ VTYNTL  A+ + GE   AE+++  M+   ++PN  T   +V+
Sbjct: 209 ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVN 268

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
           G CK G MEDA +    M    + P+ V +N+L+ G+     S         M + G+ P
Sbjct: 269 GMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMP 328

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           DVVTF++++     AG + +   +   M + G++ +   F+ L  G+ + G    A   +
Sbjct: 329 DVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAV 388

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M++  + P+VV +  +I+G+C   +M  A  +  +M   G+ P++ TY T++  Y + 
Sbjct: 389 RGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKN 448

Query: 394 KQPWRAEELLQVMEEKGVRPKKST 417
                A EL Q M EKGV P   T
Sbjct: 449 CDTHSAFELNQQMLEKGVLPDAIT 472



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/432 (22%), Positives = 188/432 (43%), Gaps = 55/432 (12%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N LVG     G  HEA  +F  + ++G  P ++T+T+L+  + +    +  ++L+ ++ +
Sbjct: 299 NTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRE 358

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G++ + + F A+I+   + G +D+A+   + MK    KP+   YN LI GY  VG+ +E
Sbjct: 359 RGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDE 418

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           + +LL  M + K +KP+  TY+ ++ A+C       A+ +  +M+  G+ PDA+TY++L 
Sbjct: 419 ARELLHEM-EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLI 477

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
           R          A  +   M    ++P+E T   ++ G+CKEGN+E A+    +M +  V 
Sbjct: 478 RVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVL 537

Query: 238 PNLVVFNSLIKGF-------------LDIKDSDGV------------------DKALTLM 266
           P++V ++ LI G                +   D +                     L L+
Sbjct: 538 PDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALL 597

Query: 267 EEFGVKP-------------------DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           + F +K                    D   +S ++     AG + K       M++ G  
Sbjct: 598 KGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFA 657

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P+      L +G    G   +A+ ++  +  Y    +      +I    N   +   + +
Sbjct: 658 PNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDV 717

Query: 368 YEKMCEIGINPN 379
              M + G+ P+
Sbjct: 718 LHGMAKDGLLPS 729


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 243/440 (55%), Gaps = 1/440 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   +A+  ++ +++    P ++TY++++AAL + +     + +++ + K+G+
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV 262

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +N++++    S    EA+   +KM+  G +P   TYN+L+      G+  E+ K
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M++ + ++P+  TY  L++ + +K ++ E   ++  MV +GI PD   +N L  AY
Sbjct: 323 IFDSMTK-RGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAY 381

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+  +   A  +  +M+ + + PN  T G ++   CK G+++DAM +  +M +  + PN+
Sbjct: 382 AKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNI 441

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +V+ SLI         D  ++ +  M + G+  + + F++I+ +    G + + +++FD 
Sbjct: 442 IVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDL 501

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ G++P++  +S L  GY  AG+  +A  +L+SM   G+ P+ V + T+I+G+C   +
Sbjct: 502 MVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSR 561

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M  A++++++M   G++PN+ TY  +L G    ++   A+EL   + + G + + ST  +
Sbjct: 562 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNI 621

Query: 421 VADSWRAIGLAREAKRVLKS 440
           +        L  EA R+ ++
Sbjct: 622 ILHGLCKNNLTDEALRMFQN 641



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 201/388 (51%), Gaps = 3/388 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT+ TY  L+    R  R     + +  V K G + ++I F  ++          +AM I
Sbjct: 85  PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 87  -FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN--VKPNDRTYNILVR 143
             ++M +  C P   +   L+KG  +  + +E+L+LL +M+ D+     P+  +Y  ++ 
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +  +   ++A++  ++M+   I PD VTY+++  A  +     +A ++L  M  N V P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  T   I+ GYC     ++A+ FL +M+   V P++V +NSL+        S    K  
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M + G++PD+ T+ T++  +++ G + +   + D MV+ GI PD HVF+IL   Y + 
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
            +  +A  + + MR++G++PNVV +  VI   C +  +  AM  +E+M + G+ PN+  Y
Sbjct: 385 EKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGV 411
            +L+       +  +AEEL+  M ++G+
Sbjct: 445 TSLIHSLCIFDKWDKAEELILEMLDRGI 472



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 107/468 (22%), Positives = 215/468 (45%), Gaps = 36/468 (7%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +   +++ G  P  +TY +++      ++ K  +  + K+  DG++PD + +N+++
Sbjct: 249 KAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLM 308

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   ++G   EA KIF  M   G +P  +TY TL++GY   G   E   LL LM ++  +
Sbjct: 309 DYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRN-GI 367

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY------------------ 173
            P+   +NIL+ A+  +  ++EA  V  KM   G+ P+ VTY                  
Sbjct: 368 HPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAML 427

Query: 174 -----------------NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
                             +L  +   + +  +AE+++ EM +  +  N      I+  +C
Sbjct: 428 YFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHC 487

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           KEG + ++ +    M  + V PN++ +++LI G+      D   K L+ M   G+KPD V
Sbjct: 488 KEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCV 547

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T++T+++ +     M     +F +MV +G+ P+I  ++I+ +G         A+ +   +
Sbjct: 548 TYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGI 607

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
            K G    +  +  ++ G C       A+ +++ +C   +    +T+  ++    +  + 
Sbjct: 608 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 667

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
             A++L   +   G+ P   T  L+A++    GL  E   +  S EE+
Sbjct: 668 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEEN 715



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/413 (23%), Positives = 196/413 (47%), Gaps = 7/413 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   G+  EA  IF+ + + G  P + TY TL+     +     + +L+  + ++G+
Sbjct: 308 MDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGI 367

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD  +FN +I A ++   VDEAM +F KM+  G  P   TY  +I      G  ++++ 
Sbjct: 368 HPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAML 427

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             + M  D+ + PN   Y  L+ + C  +  ++A  ++ +M+  GI  + + +N++  ++
Sbjct: 428 YFEQMI-DEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSH 486

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    +E++   M    V+PN  T   ++ GYC  G M++A + L  M  + + P+ 
Sbjct: 487 CKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDC 546

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +N+LI G+  +     +D AL L +E    GV P+++T++ I+            +E+
Sbjct: 547 VTYNTLINGYCRVSR---MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 603

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           +  + K+G + ++  ++I+  G  +     +A  +  ++    +      F  +I     
Sbjct: 604 YVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 663

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
             +   A  ++  +   G+ P+++TY  +     E       ++L   MEE G
Sbjct: 664 VGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 716



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/415 (21%), Positives = 197/415 (47%), Gaps = 1/415 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG   E H + + ++  G  P    +  L+ A  +Q++    + + SK+ + G+ P+ + 
Sbjct: 349 KGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVT 408

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           + A+I    +SG+VD+AM  F++M D G  P    Y +LI       K +++ +L+  M 
Sbjct: 409 YGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM- 467

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            D+ +  N   +N ++ + C +  + E+  +   MV  G++P+ +TY+TL   Y   G+ 
Sbjct: 468 LDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKM 527

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++L  M +  ++P+  T   +++GYC+   M+DA+     M    V PN++ +N +
Sbjct: 528 DEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 587

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           ++G    + +    +    + + G + ++ T++ I+       L  +   +F ++    +
Sbjct: 588 LQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL 647

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           + +   F+I+    ++ G   +A+ +  ++   G+ P+V  ++ +         ++    
Sbjct: 648 QLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDD 707

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           ++  M E G   N +   +++    +     RA   L +++EK    + ST  L+
Sbjct: 708 LFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDEKHFSLEASTASLL 762



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 140/299 (46%), Gaps = 4/299 (1%)

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA- 189
           V P   TY IL+   C    ++  +  +  +V  G + +A+T+  L +       T  A 
Sbjct: 83  VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE---VHPNLVVFNSL 246
           + +L  M      P+  +C I++ G C E   ++A+  L+ M +       P++V + ++
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I GF    DSD        M +  + PDVVT+S+I+ A      M K  E+   MVK G+
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV 262

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+   ++ +  GY  + +P++A   L  MR  GV P+VV + +++   C   +   A  
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           I++ M + G+ P++ TY TLL GY           LL +M   G+ P      ++  ++
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAY 381



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 167/334 (50%), Gaps = 1/334 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + IL   G   +A   F  +I+EG  P +I YT+L+ +L    ++     LI ++   G+
Sbjct: 413 IGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGI 472

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             ++I FN++I++  + G V E+ K+F  M   G KP   TY+TLI GY   GK +E+ K
Sbjct: 473 CLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATK 532

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M     +KP+  TYN L+  +C  + +++A  +  +MV+SG+ P+ +TYN + +  
Sbjct: 533 LLSSMFS-VGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 591

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                T  A+++   +  +  +    T  II+ G CK    ++A+R    +   ++    
Sbjct: 592 FHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 651

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FN +I   L +  +D        +   G+ PDV T+S + +     GL+ +  ++F  
Sbjct: 652 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 711

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           M + G   +  + + + +  ++ G+  +A + L+
Sbjct: 712 MEENGCTANSRMLNSIVRKLLQRGDITRAGTYLS 745



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/443 (21%), Positives = 183/443 (41%), Gaps = 77/443 (17%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG---MKPDSILFN 68
           +A ++F  L+  G   ++      +A + R     ++ S  +++ + G   + P    + 
Sbjct: 33  DARHVFEELLRRGRGASIYGLNRALADVARHSPAAAV-SRYNRMARAGAGKVTPTVHTYG 91

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I  C  +G +D        +   G +    T+  L+KG     +  +++ ++     +
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV---ASGIQPDAVTYNTLARAYAQYGE 185
            +  P+  +  IL++  C +N  +EA  +++ M      G  PD V+Y T          
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTT---------- 201

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN------------------------- 220
                                    +++G+ KEG+                         
Sbjct: 202 -------------------------VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSS 236

Query: 221 ----------MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
                     M+ AM  L  M +  V PN + +NS++ G+   +        L  M   G
Sbjct: 237 IIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDG 296

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           V+PDVVT++++MD     G   + ++IFD M K G+EPDI  +  L +GY   G   +  
Sbjct: 297 VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMH 356

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           ++L  M + G+HP+  +F  +I  +    K+  AM ++ KM + G+NPN+ TY  ++   
Sbjct: 357 ALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGIL 416

Query: 391 GEAKQPWRAEELLQVMEEKGVRP 413
            ++     A    + M ++G+ P
Sbjct: 417 CKSGSVDDAMLYFEQMIDEGLTP 439



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 120/274 (43%), Gaps = 11/274 (4%)

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           V  ++ A A ++Y    RA          +V P   T GI++   C+ G ++     L  
Sbjct: 60  VARHSPAAAVSRYNRMARAGA-------GKVTPTVHTYGILIGCCCRAGRLDLGFAALGN 112

Query: 231 MKELEVHPNLVVFNSLIKGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
           + +       + F  L+KG   D + SD +D  L  M E    PDV + + ++       
Sbjct: 113 VVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDEN 172

Query: 290 LMGKCQEIFDDMVK---AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
              +  E+   M      G  PD+  ++ +  G+ + G+  KA S    M    + P+VV
Sbjct: 173 RSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVV 232

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            ++++I+  C    M +AM +   M + G+ PN  TY ++L GY  ++QP  A   L+ M
Sbjct: 233 TYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKM 292

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
              GV P   T   + D     G + EA+++  S
Sbjct: 293 RSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDS 326


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 243/440 (55%), Gaps = 1/440 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   +A+  ++ +++    P ++TY++++AAL + +     + +++ + K+G+
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV 262

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +N++++    S    EA+   +KM+  G +P   TYN+L+      G+  E+ K
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M++ + ++P+  TY  L++ + +K ++ E   ++  MV +GI PD   +N L  AY
Sbjct: 323 IFDSMTK-RGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAY 381

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+  +   A  +  +M+ + + PN  T G ++   CK G+++DAM +  +M +  + PN+
Sbjct: 382 AKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNI 441

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +V+ SLI         D  ++ +  M + G+  + + F++I+ +    G + + +++FD 
Sbjct: 442 IVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDL 501

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ G++P++  +S L  GY  AG+  +A  +L+SM   G+ P+ V + T+I+G+C   +
Sbjct: 502 MVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSR 561

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M  A++++++M   G++PN+ TY  +L G    ++   A+EL   + + G + + ST  +
Sbjct: 562 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNI 621

Query: 421 VADSWRAIGLAREAKRVLKS 440
           +        L  EA R+ ++
Sbjct: 622 ILHGLCKNNLTDEALRMFQN 641



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 201/388 (51%), Gaps = 3/388 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT+ TY  L+    R  R     + +  V K G + ++I F  ++          +AM I
Sbjct: 85  PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 87  -FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN--VKPNDRTYNILVR 143
             ++M +  C P   +   L+KG  +  + +E+L+LL +M+ D+     P+  +Y  ++ 
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +  +   ++A++  ++M+   I PD VTY+++  A  +     +A ++L  M  N V P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  T   I+ GYC     ++A+ FL +M+   V P++V +NSL+        S    K  
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M + G++PD+ T+ T++  +++ G + +   + D MV+ GI PD HVF+IL   Y + 
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
            +  +A  + + MR++G++PNVV +  VI   C +  +  AM  +E+M + G+ PN+  Y
Sbjct: 385 EKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGV 411
            +L+       +  +AEEL+  M ++G+
Sbjct: 445 TSLIHSLCIFDKWDKAEELILEMLDRGI 472



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/468 (22%), Positives = 216/468 (46%), Gaps = 36/468 (7%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +   +++ G  P  +TY +++      ++ K  +  + K+  DG++PD + +N+++
Sbjct: 249 KAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLM 308

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   ++G   EA KIF  M   G +P  +TY TL++GY   G   E   LL LM ++  +
Sbjct: 309 DYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRN-GI 367

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY------------------ 173
            P+   +NIL+ A+  +  ++EA  V  KM   G+ P+ VTY                  
Sbjct: 368 HPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAML 427

Query: 174 -----------------NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
                             +L  +   + +  +AE+++ EM +  +  N      I+  +C
Sbjct: 428 YFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHC 487

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           KEG + ++ +    M  + V PN++ +++LI G+      D   K L+ M   G+KPD V
Sbjct: 488 KEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCV 547

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T++T+++ +     M     +F +MV +G+ P+I  ++I+ +G         A+ +   +
Sbjct: 548 TYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGI 607

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
            K G    +  +  ++ G C       A+ +++ +C   +    +T+  ++    +  + 
Sbjct: 608 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 667

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
             A++L       G+ P   T +L+A++    GL  E  ++  S E++
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDN 715



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 163/334 (48%), Gaps = 1/334 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + IL   G   +A   F  +I+EG  P +I YT+L+ +L    ++     LI ++   G+
Sbjct: 413 IGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGI 472

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             ++I FN++I++  + G V E+ K+F  M   G KP   TY+TLI GY   GK +E+ K
Sbjct: 473 CLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATK 532

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M     +KP+  TYN L+  +C  + +++A  +  +MV+SG+ P+ +TYN + +  
Sbjct: 533 LLSSMFS-VGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 591

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                T  A+++   +  +  +    T  II+ G CK    ++A+R    +   ++    
Sbjct: 592 FHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 651

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FN +I   L +  +D            G+ P+  T+  + +     GL+ +  ++F  
Sbjct: 652 RTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFS 711

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           M   G   D  + + + +  ++ GE  +A + L+
Sbjct: 712 MEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS 745



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 140/299 (46%), Gaps = 4/299 (1%)

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA- 189
           V P   TY IL+   C    ++  +  +  +V  G + +A+T+  L +       T  A 
Sbjct: 83  VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE---VHPNLVVFNSL 246
           + +L  M      P+  +C I++ G C E   ++A+  L+ M +       P++V + ++
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I GF    DSD        M +  + PDVVT+S+I+ A      M K  E+   MVK G+
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV 262

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+   ++ +  GY  + +P++A   L  MR  GV P+VV + +++   C   +   A  
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           I++ M + G+ P++ TY TLL GY           LL +M   G+ P      ++  ++
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAY 381



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/443 (21%), Positives = 184/443 (41%), Gaps = 77/443 (17%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG---MKPDSILFN 68
           +A ++F+ L+  G   ++      +A + R     ++ S  +++ + G   + P    + 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARHSPAAAV-SRYNRMARAGAGKVTPTVHTYG 91

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I  C  +G +D        +   G +    T+  L+KG     +  +++ ++     +
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV---ASGIQPDAVTYNTLARAYAQYGE 185
            +  P+  +  IL++  C +N  +EA  +++ M      G  PD V+Y T          
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTT---------- 201

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN------------------------- 220
                                    +++G+ KEG+                         
Sbjct: 202 -------------------------VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSS 236

Query: 221 ----------MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
                     M+ AM  L  M +  V PN + +NS++ G+   +        L  M   G
Sbjct: 237 IIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDG 296

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           V+PDVVT++++MD     G   + ++IFD M K G+EPDI  +  L +GY   G   +  
Sbjct: 297 VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMH 356

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           ++L  M + G+HP+  +F  +I  +    K+  AM ++ KM + G+NPN+ TY  ++   
Sbjct: 357 ALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGIL 416

Query: 391 GEAKQPWRAEELLQVMEEKGVRP 413
            ++     A    + M ++G+ P
Sbjct: 417 CKSGSVDDAMLYFEQMIDEGLTP 439



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 120/274 (43%), Gaps = 11/274 (4%)

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           V  ++ A A ++Y    RA          +V P   T GI++   C+ G ++     L  
Sbjct: 60  VARHSPAAAVSRYNRMARAGA-------GKVTPTVHTYGILIGCCCRAGRLDLGFAALGN 112

Query: 231 MKELEVHPNLVVFNSLIKGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
           + +       + F  L+KG   D + SD +D  L  M E    PDV + + ++       
Sbjct: 113 VVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDEN 172

Query: 290 LMGKCQEIFDDMVK---AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
              +  E+   M      G  PD+  ++ +  G+ + G+  KA S    M    + P+VV
Sbjct: 173 RSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVV 232

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            ++++I+  C    M +AM +   M + G+ PN  TY ++L GY  ++QP  A   L+ M
Sbjct: 233 TYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKM 292

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
              GV P   T   + D     G + EA+++  S
Sbjct: 293 RSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDS 326



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 135/290 (46%), Gaps = 5/290 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  E+  +F+ ++  G +P +ITY+TL+       +      L+S +   GMKPD + 
Sbjct: 489 EGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVT 548

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +IN       +D+A+ +F++M  SG  P   TYN +++G  +  +   + +L   ++
Sbjct: 549 YNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGIT 608

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +    +    TYNI++   C  N  +EA  +   +  + +Q +  T+N +  A  + G  
Sbjct: 609 K-SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 667

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+ +     +N + PN  T  ++      +G +E+  +  + M++     +  + N +
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFI 727

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           ++  L   +       L++++E     +  T S  +D  S     GK QE
Sbjct: 728 VRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG----GKYQE 773


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 209/425 (49%), Gaps = 1/425 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F  +I+ G +P  +TY T++  L + +       +  ++   G+KPD++ +  +I+
Sbjct: 314 AEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIID 373

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              ++ +VD A  +FQ+M D G KP   TYN LI GY + G+ EE ++ ++ MS   +++
Sbjct: 374 GLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSA-HDLE 432

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+  TY +L+   C      EA ++   M+  GI+P    Y  +   Y + G       +
Sbjct: 433 PDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDL 492

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           L  M  N + PN R    ++  Y K   +++ M    +MK+  + PN+V + +LI     
Sbjct: 493 LNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCK 552

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +   D        M   GV P+ V F++++    +     K +E+F +M+  GI PDI  
Sbjct: 553 LGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVF 612

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           F+ +     + G   +A  ++ SM   G+ P+V+ + T+I G C A +M  A+ + + M 
Sbjct: 613 FNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMV 672

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
             G+ PN+ +Y TLL GY +A +   A  L + M  KGV P   T   + +     G   
Sbjct: 673 SAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFS 732

Query: 433 EAKRV 437
           EA+ +
Sbjct: 733 EAREL 737



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 210/449 (46%), Gaps = 39/449 (8%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P +++Y  ++     + +     SL  ++   G+ PD + +N +I+   ++  VD A  +
Sbjct: 191 PDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDV 247

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           FQ+M + G KP   TYNT+I G     + + +  + Q M  DK VKP++ TYN ++   C
Sbjct: 248 FQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMV-DKGVKPSNVTYNTIIDGLC 306

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
              +++ A  V  +M+  G++PD VTYNT+     +     +AE +  +M +  V+P+  
Sbjct: 307 KAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNL 366

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T  II+ G CK  +++ A     +M +  V PN   +N LI G+L     + V + +  M
Sbjct: 367 TYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM 426

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
               ++PDV T+  ++D     G   + + +FD M++ GI+P + ++ I+  GY + G  
Sbjct: 427 SAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGAL 486

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +   +L  M   G+ PN  +F TVI  +     +   M I+ KM + G++PN+ TY TL
Sbjct: 487 SEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTL 546

Query: 387 L-----------------------------------WGYGEAKQPWRAEELLQVMEEKGV 411
           +                                   +G     +  + EEL   M  +G+
Sbjct: 547 IDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGI 606

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLKS 440
           RP       V  +    G   EA+R++ S
Sbjct: 607 RPDIVFFNTVLCNLCKEGRVMEARRLIDS 635



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/473 (22%), Positives = 215/473 (45%), Gaps = 37/473 (7%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F  +I++G +P   TY  L+       +++ ++  I ++    ++PD   +  +++
Sbjct: 384 AEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLD 443

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              ++G  +EA  +F  M   G KP+ + Y  ++ GYG  G   E   LL LM  +  + 
Sbjct: 444 YLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVAN-GIS 502

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA--- 189
           PN R +N ++ A+  +  I+E  ++  KM   G+ P+ VTY TL  A  + G    A   
Sbjct: 503 PNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQ 562

Query: 190 --------------------------------EQMLFEMQNNQVRPNERTCGIIVSGYCK 217
                                           E++  EM N  +RP+      ++   CK
Sbjct: 563 FNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCK 622

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
           EG + +A R +  M  + + P+++ +N+LI G       D   K L  M   G+KP++V+
Sbjct: 623 EGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVS 682

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           ++T++  +  AG +     +F +M++ G+ P +  ++ +  G  R+G   +A  +  +M 
Sbjct: 683 YNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMI 742

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
           K     ++  ++ ++ G+C       A  I++ +C + +  ++ T+  ++ G  +  +  
Sbjct: 743 KSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKE 802

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            A +L   +   G+ P   T +L+A++    G + E    L S  E   + PN
Sbjct: 803 DAMDLFAAIPANGLVPSVVTYRLIAENLIEEG-SLEELDCLFSVMEKSGTAPN 854



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 202/447 (45%), Gaps = 35/447 (7%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   TY+ ++    R  R +   +    + K G + D I+ N ++    ++  V EAM +
Sbjct: 82  PDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHV 141

Query: 87  F-QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM--SQDKNVKPNDRTYNILVR 143
             ++M + GC+    +YNTL+KG  +  + EE+ +LL +M   QD +  P+  +YNI++ 
Sbjct: 142 LLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVIN 201

Query: 144 AW--------------------------------CSKNSIEEAWNVVYKMVASGIQPDAV 171
            +                                C    ++ A +V  +MV  G++P+ V
Sbjct: 202 GFFNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNV 261

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
           TYNT+     +  E   AE +  +M +  V+P+  T   I+ G CK   ++ A     +M
Sbjct: 262 TYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQM 321

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
            +  V P+ V +N++I G    +  D  +     M + GVKPD +T++ I+D    A  +
Sbjct: 322 IDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSV 381

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            + + +F  M+  G++P+   ++ L  GY+  G+ ++    +  M  + + P+V  +  +
Sbjct: 382 DRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLL 441

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           +   C   K   A S+++ M   GI P++  Y  +L GYG+        +LL +M   G+
Sbjct: 442 LDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGI 501

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVL 438
            P       V  ++    +  E   + 
Sbjct: 502 SPNHRIFNTVICAYAKRAMIDEVMHIF 528



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/417 (25%), Positives = 209/417 (50%), Gaps = 9/417 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   GK +EA  +F+ +I +G +P++  Y  ++    ++     +  L++ +  +G+
Sbjct: 442 LDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGI 501

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES-L 119
            P+  +FN +I A ++   +DE M IF KMK  G  P   TY TLI     +G+ +++ L
Sbjct: 502 SPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVL 561

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +  Q++++   V PN+  +N LV   C+ +  E+   +  +M+  GI+PD V +NT+   
Sbjct: 562 QFNQMINE--GVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCN 619

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G    A +++  M    ++P+  +   ++ G+C    M++A++ L  M    + PN
Sbjct: 620 LCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPN 679

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           +V +N+L+ G+     +  +D A  L  E    GV P V T++TI++    +G   + +E
Sbjct: 680 IVSYNTLLHGYC---KAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARE 736

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           ++ +M+K+     I  +SI+  G+ +     +A  I  S+    +  +++ F  +I G  
Sbjct: 737 LYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLF 796

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
              + + AM ++  +   G+ P++ TY  +     E       + L  VME+ G  P
Sbjct: 797 KGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAP 853



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 199/439 (45%), Gaps = 12/439 (2%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK------DGMKPDS 64
           H+A  +F+ L+      ++     L++ ++R K   S    +S+  +      + + PD 
Sbjct: 25  HDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDC 84

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
             ++ +I      G ++     F  +  +G +      N L+KG  +  +  E++ +L  
Sbjct: 85  CTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLR 144

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV---ASGIQPDAVTYNTLARAYA 181
              +   +    +YN L++  C +   EEA  +++ MV    S   PD V+YN +   + 
Sbjct: 145 QMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFF 204

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
             G+  +A  +  EM    V P+  T   I+ G CK   ++ A     +M E  V PN V
Sbjct: 205 NEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNV 261

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            +N++I G    ++ D  +     M + GVKP  VT++TI+D    A  + + + +F  M
Sbjct: 262 TYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQM 321

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           +  G++PD   ++ +  G  +A    KAE +   M   GV P+ + +T +I G C A  +
Sbjct: 322 IDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSV 381

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            RA  ++++M + G+ PN  TY  L+ GY    Q     + ++ M    + P   T  L+
Sbjct: 382 DRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLL 441

Query: 422 ADSWRAIGLAREAKRVLKS 440
            D     G   EA+ +  S
Sbjct: 442 LDYLCKNGKCNEARSLFDS 460



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 179/372 (48%), Gaps = 5/372 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  +A   FN +I EG  P  + + +LV  L    +++ +  L  ++   G+
Sbjct: 547 IDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGI 606

Query: 61  KPDSILFNAMI-NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +PD + FN ++ N C E G V EA ++   M   G KP   +YNTLI G+    + +E++
Sbjct: 607 RPDIVFFNTVLCNLCKE-GRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAV 665

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           KLL  M     +KPN  +YN L+  +C    I+ A+ +  +M+  G+ P   TYNT+   
Sbjct: 666 KLLDGMVS-AGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNG 724

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G    A ++   M  ++   +  T  II+ G+CK    ++A +    +  +++  +
Sbjct: 725 LFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLD 784

Query: 240 LVVFNSLIKG-FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           ++ FN +I G F   +  D +D     +   G+ P VVT+  I +     G + +   +F
Sbjct: 785 IITFNIMIDGLFKGGRKEDAMD-LFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLF 843

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
             M K+G  P+ H+ + L +  +  GE  +A + L+ + +          + +IS +   
Sbjct: 844 SVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSRE 903

Query: 359 VKMQRAMSIYEK 370
              Q A S+ EK
Sbjct: 904 EYQQHAKSLPEK 915



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/391 (21%), Positives = 182/391 (46%), Gaps = 1/391 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           E  +IF  + ++G  P ++TY TL+ AL +  R    +   +++  +G+ P++++FN+++
Sbjct: 523 EVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLV 582

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                    ++  ++F +M + G +P    +NT++      G+  E+ +L+  M     +
Sbjct: 583 YGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVC-MGL 641

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KP+  +YN L+   C  + ++EA  ++  MV++G++P+ V+YNTL   Y + G    A  
Sbjct: 642 KPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYC 701

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  EM    V P   T   I++G  + G   +A      M +     ++  ++ ++ GF 
Sbjct: 702 LFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFC 761

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                D   K    +    ++ D++TF+ ++D     G      ++F  +   G+ P + 
Sbjct: 762 KNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVV 821

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            + ++A+  +  G  ++ + + + M K G  PN  M   +I    +  ++ RA +   K+
Sbjct: 822 TYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKL 881

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
            E   +    T   L+  +   +    A+ L
Sbjct: 882 DEKNFSLEASTTSMLISLFSREEYQQHAKSL 912


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 213/422 (50%), Gaps = 2/422 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G+ P++  Y  ++ AL+      S    +S + + G+ P+   +N ++ A    G ++EA
Sbjct: 113 GYAPSVPAYNAVLLALS-DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +   M+ +GC P   TYNTL+  +   G+ + + +++ LM ++ N KPN  T+N +V 
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C    +E A  V  +MV  G+ PD V+YNTL   Y + G  + +  +  EM    + P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   ++   CK GN+E A+  + +M+E  +  N V F +LI GF      D    A+
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M + G++P VV ++ +++ +   G M   +E+  +M    ++PD+  +S +  GY + 
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G    A  +   M K GV P+ + ++++I G C   ++  A  ++E M ++G+ P+  TY
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL-KSAE 442
            TL+ G+ +     +A  L   M  KGV P   T  ++ +        +EA R+L K   
Sbjct: 472 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYH 531

Query: 443 ED 444
           ED
Sbjct: 532 ED 533



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 216/469 (46%), Gaps = 51/469 (10%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG-MKP 62
           L  +G+  EA  +   +   G  P  +TY TLVAA  R         ++S + ++G  KP
Sbjct: 162 LCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKP 221

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           + + FN+M+N   ++G ++ A K+F +M   G  P   +YNTL+ GY  VG   ESL + 
Sbjct: 222 NLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVF 281

Query: 123 QLMSQ----------------------------------DKNVKPNDRTYNILVRAWCSK 148
             M+Q                                  ++ ++ N+ T+  L+  +C K
Sbjct: 282 SEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKK 341

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
             +++A   V +M   GIQP  V YN L   Y + G    A +++ EM+  +V+P+  T 
Sbjct: 342 GFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTY 401

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             I+SGYCK GN++ A +   +M +  V P+ + ++SLI+G  + K  +   +    M +
Sbjct: 402 STIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ 461

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            GV+PD  T++T++D     G + K   + D+M++ G+ PD+  +S+L  G  ++   ++
Sbjct: 462 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521

Query: 329 AESILTSMRKYGVHPNVVMF---------------TTVISGWCNAVKMQRAMSIYEKMCE 373
           A  +L  +      P+ + +                 ++ G+C    M+ A  +Y+ M +
Sbjct: 522 AHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLD 581

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK-STIQLV 421
                +   Y  L+ G+       +A    + M   G  P   STI LV
Sbjct: 582 RNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLV 630



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/422 (25%), Positives = 211/422 (50%), Gaps = 22/422 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+   A  +F+ ++ EG  P +++Y TL++   +       L++ S++ + G+
Sbjct: 230 VNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL 289

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + F ++I+A  ++GN+++A+ +  +M++ G +    T+  LI G+   G  +++L 
Sbjct: 290 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALL 349

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            ++ M +   ++P+   YN L+  +C    ++ A  ++ +M A  ++PD VTY+T+   Y
Sbjct: 350 AVEEM-RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A Q+  +M    V P+  T   ++ G C+E  + DA      M +L V P+ 
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             + +LI G    K+ + V+KAL+L +E    GV PDVVT+S +++  S +    +   +
Sbjct: 469 FTYTTLIDG--HCKEGN-VEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 525

Query: 298 F-----DDMVKAGIEPDIHVFSI----------LAKGYVRAGEPQKAESILTSMRKYGVH 342
                 +D V   I+ D  +             L KG+   G  ++A+ +  SM      
Sbjct: 526 LFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWK 585

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
            +  +++ +I G C    +++A+S +++M   G +PN  +  +L+ G  E      A+  
Sbjct: 586 LDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNA 645

Query: 403 LQ 404
           +Q
Sbjct: 646 IQ 647



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 96/201 (47%), Gaps = 16/201 (7%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           ++A  +F  +++ G +P   TYTTL+    ++   +  LSL  ++ + G+ PD + ++ +
Sbjct: 450 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 509

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTL---------------IKGYGNVGKP 115
           IN  S+S    EA ++  K+      P    Y+ L               +KG+   G  
Sbjct: 510 INGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLM 569

Query: 116 EESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
           +E+ K+ Q M  D+N K +   Y+IL+   C   ++ +A +   +M+ SG  P++ +  +
Sbjct: 570 KEADKVYQSM-LDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTIS 628

Query: 176 LARAYAQYGETYRAEQMLFEM 196
           L R   + G    A+  + ++
Sbjct: 629 LVRGLFEEGMVVEADNAIQDL 649


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/419 (32%), Positives = 217/419 (51%), Gaps = 13/419 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  EA  +   +IE+G  PT+ TYT  + AL   +  +  + L+++++K G 
Sbjct: 275 INGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGC 334

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+   + A+I+  S  G ++ A+ ++ KM   G  P T TYN LI      G+   +LK
Sbjct: 335 RPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALK 394

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M    ++  N +TYN +++  C    IE+A  +  KM+  G  P  VTYNTL   Y
Sbjct: 395 IFHWMEGHGSL-ANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGY 453

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A ++L  M+ N   P+E T   +VSG+ K G +E A  +   M E  ++PN 
Sbjct: 454 LTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNP 513

Query: 241 VVFNSLIKGFLDIKDSDG-VDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           V + +LI G       DG VD AL+L   MEE G  P+V +++ +++  S      + ++
Sbjct: 514 VSYTALIDG----HSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           I D MV+ G+ P++  ++ L  G  R G  Q A  I   M K    PN+  ++++I G C
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 629

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
              K   A    E+M EIG  P L TY TL+ G     + + AE+L++ M+E+G  P +
Sbjct: 630 QEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDR 684



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 217/437 (49%), Gaps = 1/437 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +NIL  KGK  EA  I + + +    P + TYT+L+    R +       +  ++ K+G 
Sbjct: 205 INILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGC 264

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+S+ ++ +IN     G VDEA+ + ++M + G +PT  TY   I     +   EE+++
Sbjct: 265 DPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIE 324

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L+  M + +  +PN +TY  L+        +E A  + +KM+  G+ P+ VTYN L    
Sbjct: 325 LVARMKK-RGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINEL 383

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A ++   M+ +    N +T   I+ G C  G++E AM    +M ++   P +
Sbjct: 384 CVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTV 443

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+LI G+L   + +   + L LM+E G +PD  T++ ++  +S  G +      F +
Sbjct: 444 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 503

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ G+ P+   ++ L  G+ + G+   A S+L  M + G +PNV  +  VI+G     +
Sbjct: 504 MVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENR 563

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
              A  I +KM E G+ PN+ TY TL+ G     +   A ++   ME++   P   T   
Sbjct: 564 FSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSS 623

Query: 421 VADSWRAIGLAREAKRV 437
           +       G A EA+R+
Sbjct: 624 LIYGLCQEGKADEAERM 640



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 226/441 (51%), Gaps = 8/441 (1%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  ++  ++  G +P+L+T+ TL+  L+++ + +    ++S++ +  + PD   + ++I 
Sbjct: 182 ARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLIL 241

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
               + N+D A  +F +M   GC P + TY+TLI G  N G+ +E+L +L+ M + K ++
Sbjct: 242 GHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIE-KGIE 300

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P   TY + + A C+    EEA  +V +M   G +P+  TY  L    ++ G+   A  +
Sbjct: 301 PTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGL 360

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             +M    + PN  T   +++  C  G    A++  + M+      N   +N +IKG   
Sbjct: 361 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCL 420

Query: 253 IKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
             D   ++KA+ L E+    G  P VVT++T+++ + + G +     + D M + G EPD
Sbjct: 421 GGD---IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPD 477

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
              ++ L  G+ + G+ + A      M + G++PN V +T +I G     K+  A+S+ +
Sbjct: 478 EWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLK 537

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           +M E+G NPN+++Y  ++ G  +  +   AE++   M E+G+ P   T   + D     G
Sbjct: 538 RMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNG 597

Query: 430 LAREAKRVLKSAEEDRQSMPN 450
             + A ++    E+ R+ +PN
Sbjct: 598 RTQFAFKIFHDMEK-RKCLPN 617



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 118/472 (25%), Positives = 211/472 (44%), Gaps = 49/472 (10%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK   A  +++ +++EG  P  +TY  L+  L    RF + L +   +E  G   ++  +
Sbjct: 352 GKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTY 411

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I      G++++AM +F+KM   G  PT  TYNTLI GY   G    + +LL LM +
Sbjct: 412 NEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE 471

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG--- 184
           +   +P++ TYN LV  +     +E A     +MV  G+ P+ V+Y  L   +++ G   
Sbjct: 472 N-GCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVD 530

Query: 185 ------------------ETY--------------RAEQMLFEMQNNQVRPNERTCGIIV 212
                             E+Y               AE++  +M    + PN  T   ++
Sbjct: 531 IALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLI 590

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
            G C+ G  + A +  + M++ +  PNL  ++SLI G      +D  ++    M E G +
Sbjct: 591 DGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAER----MSEIGCE 646

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           P + T+ST++      G   + +++  DM + G  PD  ++  L   + +  E   A  I
Sbjct: 647 PTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKI 706

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
             S+   G   ++ ++  +I   C A +++ A ++++ M E   N +   +  L+ G  +
Sbjct: 707 FHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLK 766

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
             +     +LL +ME K   P   T  +         L RE  R+ KS E +
Sbjct: 767 EGELDLCMKLLHIMESKNFTPNIQTYVI---------LGRELSRIGKSIESE 809



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 170/384 (44%), Gaps = 38/384 (9%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           ++ A   ++  + +   ++++   G        N ++   ++   V+ A  ++++M +SG
Sbjct: 134 MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG 193

Query: 95  CKPTTSTYNTLIKGYGNVGKPEES-LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
            +P+  T+NTLI      GK  E+ L L Q+   D  + P+  TY  L+   C   +++ 
Sbjct: 194 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYD--LSPDVFTYTSLILGHCRNRNLDL 251

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A+ V  +MV  G  P++VTY+TL                                   ++
Sbjct: 252 AFGVFDRMVKEGCDPNSVTYSTL-----------------------------------IN 276

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
           G C EG +++A+  L  M E  + P +  +   I     I+  +   + +  M++ G +P
Sbjct: 277 GLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRP 336

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           +V T++ ++   S  G +     ++  M+K G+ P+   ++ L       G    A  I 
Sbjct: 337 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF 396

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M  +G   N   +  +I G C    +++AM ++EKM ++G  P + TY TL+ GY   
Sbjct: 397 HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK 456

Query: 394 KQPWRAEELLQVMEEKGVRPKKST 417
                A  LL +M+E G  P + T
Sbjct: 457 GNVNNAARLLDLMKENGCEPDEWT 480



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 119/243 (48%), Gaps = 5/243 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  + +  EA  I + ++E+G  P +ITYTTL+  L R  R +    +   +EK   
Sbjct: 555 INGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKC 614

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   ++++I    + G  DEA    ++M + GC+PT  TY+TL+ G    G+  E+ +
Sbjct: 615 LPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQ 670

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L++ M +++   P+   Y  L+ A C    ++ A  + + + A G Q     Y  L  A 
Sbjct: 671 LVKDM-KERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICAL 729

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A+ +   M   +   +E    ++V G  KEG ++  M+ L+ M+     PN+
Sbjct: 730 CKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNI 789

Query: 241 VVF 243
             +
Sbjct: 790 QTY 792



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 5/189 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA      + E G  PTL TY+TLV+ L R+ RF     L+  +++ G  PD
Sbjct: 628 LCQEGKADEAER----MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPD 683

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             ++ +++ A  ++  VD A+KIF  ++  G +   S Y  LI      G+ EE+  L  
Sbjct: 684 REIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFD 743

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  +K    ++  + +LV     +  ++    +++ M +    P+  TY  L R  ++ 
Sbjct: 744 NM-LEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRI 802

Query: 184 GETYRAEQM 192
           G++  +E +
Sbjct: 803 GKSIESEPL 811


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 233/477 (48%), Gaps = 36/477 (7%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  + N +I  G +P   TY  ++    +++    +  L+S+++K  + P +   
Sbjct: 390 GDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTC 449

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +IN     G++++A ++F+ M   G KP    Y TLIKG+   G+ +E++++L++M +
Sbjct: 450 GMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDK 509

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K V+P+   YN ++   C    +EEA + + +M+  G++P+  TY  L   Y + GE  
Sbjct: 510 -KGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQ 568

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A++   EM    + PN+  C  ++ GYCKEG+  +A      M    VHP++  +++LI
Sbjct: 569 VADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALI 628

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G L      G  + L+   E G+ PDV T+++I+  +   G +GK  ++ + M + GI 
Sbjct: 629 HGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGIS 688

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P+I  ++ L  G  +AGE ++A  +   +   G+  N V + T+I G+C +  + +A  +
Sbjct: 689 PNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRL 748

Query: 368 YEKMCEIGINPNLKTYE----------------------------------TLLWGYGEA 393
           +++M   G+ P+   Y                                    L+ G+ ++
Sbjct: 749 FDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKS 808

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            +   A +LL+ M +K V+P   T  ++ D     G  +EA++     ++ R  MPN
Sbjct: 809 GKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQK-RNLMPN 864



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 208/406 (51%), Gaps = 1/406 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   E   +   + E+G  P+L+TY  ++  L R         L   ++K G+  D   +
Sbjct: 250 GNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTY 309

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +I+   +     EA  + ++M   G KP    Y  LI G+   G   E+ ++ + M  
Sbjct: 310 SILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLA 369

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + VK N  TYN LV+  C    +E+A  ++ +M+  GI+PD  TYN +   Y +   T 
Sbjct: 370 -RGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTS 428

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           R + +L EM+ + + P   TCG+I++G C+ G++EDA R    M  L V PN V++ +LI
Sbjct: 429 RVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLI 488

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           KG +         + L +M++ GV+PDV+ +++++     +  M + ++   +M++ G++
Sbjct: 489 KGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLK 548

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P+++ +  L  GY ++GE Q A+     M   G+ PN V+ T +I G+C       A SI
Sbjct: 549 PNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSI 608

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           +  M    ++P+++TY  L+ G     +   A ELL    EKG+ P
Sbjct: 609 FRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVP 654



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 213/433 (49%), Gaps = 1/433 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG   EA   F      G    L+    L++ L +  + +      + + +  +  D   
Sbjct: 179 KGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYT 238

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +  +INA   +GN  E  ++  +M++ GC P+  TYN +I G    G+ +E+ +L +LM 
Sbjct: 239 YTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMD 298

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + K +  +  TY+IL+  +  +    EA  ++ +M + G++P  V Y  L   + + G++
Sbjct: 299 K-KGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDS 357

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++  EM    V+ N  T   +V G CK G+ME A   L  M  + + P+   +N++
Sbjct: 358 GEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNM 417

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I+G+L  +++  V   L+ M++  + P   T   I++     G +     +F+ MV  G+
Sbjct: 418 IEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGV 477

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           +P+  +++ L KG+V+ G  Q+A  IL  M K GV P+V+ + +VI G C + KM+ A  
Sbjct: 478 KPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKD 537

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
              +M E G+ PN+ TY  L+ GY ++ +   A+   + M   G+ P       + D + 
Sbjct: 538 YLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYC 597

Query: 427 AIGLAREAKRVLK 439
             G   EA  + +
Sbjct: 598 KEGSTTEATSIFR 610



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 205/429 (47%), Gaps = 2/429 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G   +A  +F  ++  G +P  + YTTL+    ++ RF+  + ++  ++K G+
Sbjct: 453 INGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGV 512

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD + +N++I    +S  ++EA     +M + G KP   TY  LI GY   G+ + + +
Sbjct: 513 QPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADR 572

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             + M     + PND     L+  +C + S  EA ++   M+   + PD  TY+ L    
Sbjct: 573 YFKEM-LGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGL 631

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A ++L E     + P+  T   I+SG+CK+G +  A +    M +  + PN+
Sbjct: 632 LRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNI 691

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +N+LI G     + +   +    +   G+  + VT++TI+D +  +G + K   +FD+
Sbjct: 692 ITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDE 751

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G+ PD  V+S L  G  + G  +KA S+     + G   +      ++ G+C + K
Sbjct: 752 MTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF-ASTSSLNALMDGFCKSGK 810

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  + E M +  + P+  TY  L+  + +      AE+    M+++ + P   T   
Sbjct: 811 VIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTA 870

Query: 421 VADSWRAIG 429
           +   +   G
Sbjct: 871 LLSGYNMAG 879



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/452 (24%), Positives = 208/452 (46%), Gaps = 6/452 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +IE G +P + TY  L+    +    +       ++   G+ P+ ++  A+I+   + G+
Sbjct: 542 MIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGS 601

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             EA  IF+ M      P   TY+ LI G    GK + +++LL    + K + P+  TYN
Sbjct: 602 TTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLE-KGLVPDVFTYN 660

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++  +C +  I +A+ +   M   GI P+ +TYN L     + GE  RA ++   +   
Sbjct: 661 SIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGK 720

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            +  N  T   I+ GYCK GN+  A R    M    V P+  V+++LI G    +     
Sbjct: 721 GLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDG---CRKEGNT 777

Query: 260 DKALTLMEEFGVK--PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
           +KAL+L  E   K      + + +MD +  +G + +  ++ +DMV   ++PD   ++IL 
Sbjct: 778 EKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILI 837

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
             + + G  ++AE     M+K  + PN + +T ++SG+  A +     +++++M    I 
Sbjct: 838 DYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIE 897

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           P+  T+  ++  + +     +  +L+  M +KG    K+   ++ D         E  +V
Sbjct: 898 PDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKV 957

Query: 438 LKSAEEDRQSMPNKKDEIAVESIHRKQNLSAS 469
           L+  EE   ++        V   H+   +  +
Sbjct: 958 LEKIEEQGLNLSLATCSTLVRCFHKAGKMDGA 989



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 194/405 (47%), Gaps = 12/405 (2%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   EA  IF C++     P + TY+ L+  L R  + +  + L+S+  + G+ PD   
Sbjct: 599 EGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFT 658

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N++I+   + G + +A ++ + M   G  P   TYN LI G    G+ E + +L   + 
Sbjct: 659 YNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIP 718

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K +  N  TY  ++  +C   ++ +A+ +  +M   G+ PD+  Y+ L     + G T
Sbjct: 719 -GKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNT 777

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A  +  E        +  +   ++ G+CK G + +A + L  M +  V P+ V +  L
Sbjct: 778 EKALSLFLESVQKGF-ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTIL 836

Query: 247 IK-----GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
           I      GFL   +   VD     M++  + P+ +T++ ++  ++ AG   +   +FD+M
Sbjct: 837 IDYHCKTGFLKEAEQFFVD-----MQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEM 891

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           +   IEPD   +S++   +++ G+  K   ++  M K G + +  +   +I   C    +
Sbjct: 892 IAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHV 951

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
              + + EK+ E G+N +L T  TL+  + +A +   A  +L+ M
Sbjct: 952 SEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSM 996



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 143/309 (46%), Gaps = 2/309 (0%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            +N L   G+   A  +F+ +  +G     +TY T++    +         L  ++   G+
Sbjct: 698  INGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGV 757

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             PDS +++A+I+ C + GN ++A+ +F +    G   +TS+ N L+ G+   GK  E+ +
Sbjct: 758  PPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF-ASTSSLNALMDGFCKSGKVIEANQ 816

Query: 121  LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            LL+ M  DK+VKP+  TY IL+   C    ++EA      M    + P+A+TY  L   Y
Sbjct: 817  LLEDMV-DKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGY 875

Query: 181  AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
               G       +  EM    + P+  T  +++  + KEG+    ++ +  M +   + + 
Sbjct: 876  NMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSK 935

Query: 241  VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             V + LI      +    V K L  +EE G+   + T ST++  +  AG M     +   
Sbjct: 936  NVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKS 995

Query: 301  MVKAGIEPD 309
            MV+    PD
Sbjct: 996  MVRFKWVPD 1004



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/228 (22%), Positives = 102/228 (44%), Gaps = 35/228 (15%)

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
           +++ GY K+G  ++A+ F    K           N  + G L                  
Sbjct: 171 LLIDGYKKKGLFDEAVSFFLGAKR----------NGFVVGLLCCN--------------- 205

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G+  D++  + +   W            ++ M++A +  D++ ++ L   + RAG  ++ 
Sbjct: 206 GLLSDLLKANKLELFW----------RFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEG 255

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           + +L  M + G  P++V +  VI G C A ++  A  + + M + G+  ++ TY  L+ G
Sbjct: 256 KRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDG 315

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           +G+ K+   A+ +L+ M  KG++P       + D +   G + EA RV
Sbjct: 316 FGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRV 363



 Score = 43.1 bits (100), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 36/164 (21%), Positives = 70/164 (42%)

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           V F  ++D +   GL  +    F    + G    +   + L    ++A + +        
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M +  V  +V  +T +I+    A   +    +  +M E G +P+L TY  ++ G   A +
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
              A EL ++M++KG+     T  ++ D +       EAK +L+
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLE 330


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 216/415 (52%), Gaps = 1/415 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  + + +++ G +P L+TY  +V  L ++       +L++K+E   ++ D ++FN
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I++  +  +VD+A+ +F++M+  G +P   TY++LI    + G+  ++ +LL  M + 
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE- 248

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K + PN  T+N L+ A+  +    EA  +   M+   I PD  TYN+L   +  +    +
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A+QM   M +    P+  T   ++ G+CK   +ED       M    +  + V + +LI+
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G     D D   K    M   GV PD++T+S ++D   + G + K  E+FD M K+ I+ 
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           DI++++ + +G  +AG+      +  S+   GV PNVV + T+ISG C+   +Q A ++ 
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           +KM E G  P+  TY TL+  +        + EL++ M         STI LVA+
Sbjct: 489 KKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 543



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 213/428 (49%), Gaps = 7/428 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G+ P+++T ++L+      KR    ++L+ ++ + G +PD+I F  +I+       
Sbjct: 71  MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             EA+ +  +M   GC+P   TY  ++ G    G  + +  LL  M   K ++ +   +N
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK-IEADVVIFN 189

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++ + C    +++A N+  +M   GI+P+ VTY++L      YG    A Q+L +M   
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           ++ PN  T   ++  + KEG   +A +    M +  + P++  +NSLI GF      D +
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC---MHDRL 306

Query: 260 DKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           DKA  + E    K   PD+ T++T++  +  +  +    E+F +M   G+  D   ++ L
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
            +G    G+   A+ +   M   GV P+++ ++ ++ G CN  K+++A+ +++ M +  I
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
             ++  Y T++ G  +A +     +L   +  KGV+P   T   +     +  L +EA  
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486

Query: 437 VLKSAEED 444
           +LK  +ED
Sbjct: 487 LLKKMKED 494



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/421 (24%), Positives = 199/421 (47%), Gaps = 42/421 (9%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P++  +  L++A+ + K+F  ++SL  K+++ G+  +   +N +IN       +  A+ +
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             KM   G +P+  T ++L+ GY                                    C
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGY------------------------------------C 91

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               I +A  +V +MV  G +PD +T+ TL      + +   A  ++  M     +PN  
Sbjct: 92  HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 151

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL- 265
           T G++V+G CK G+++ A   L +M+  ++  ++V+FN++I      +    VD AL L 
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH---VDDALNLF 208

Query: 266 --MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             ME  G++P+VVT+S+++    S G      ++  DM++  I P++  F+ L   +V+ 
Sbjct: 209 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+  +AE +   M K  + P++  + ++I+G+C   ++ +A  ++E M      P+L TY
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 328

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            TL+ G+ ++K+     EL + M  +G+     T   +       G    A++V K    
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 388

Query: 444 D 444
           D
Sbjct: 389 D 389



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 143/301 (47%), Gaps = 1/301 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  +A  + + +IE+   P L+T+  L+ A  ++ +F     L   + K  +
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +N++IN       +D+A ++F+ M    C P   TYNTLIKG+    + E+  +
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + MS  + +  +  TY  L++        + A  V  +MV+ G+ PD +TY+ L    
Sbjct: 347 LFREMSH-RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G+  +A ++   MQ ++++ +      ++ G CK G ++D       +    V PN+
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 465

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N++I G    +        L  M+E G  PD  T++T++ A    G      E+  +
Sbjct: 466 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 525

Query: 301 M 301
           M
Sbjct: 526 M 526



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 1/221 (0%)

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
           +M+ L +  NL  +N LI  F            L  M + G +P +VT S++++ +    
Sbjct: 35  KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 94

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
            +     + D MV+ G  PD   F+ L  G     +  +A +++  M + G  PN+V + 
Sbjct: 95  RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 154

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
            V++G C    +  A ++  KM    I  ++  + T++    + +    A  L + ME K
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           G+RP   T   +     + G   +A ++L    E + + PN
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN-PN 254



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 98/233 (42%), Gaps = 21/233 (9%)

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MVK+   P I  F+ L     +  +     S+   M++ G+  N+  +  +I+ +C   +
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A+++  KM ++G  P++ T  +LL GY   K+   A  L+  M E G RP   T   
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDE-IAVESIHRKQNLSASNSTFLQIPGV 479
           +         A EA  ++    + R   PN     + V  + ++ ++  + +        
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGDIDLAFNLL------ 173

Query: 480 VSSEHNGSSAAKIRSQIVLRSDTVWTATK--------SLFVNTYGSGVQPMVV 524
                N   AAKI + +V+ +  + +  K        +LF      G++P VV
Sbjct: 174 -----NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 221


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 216/415 (52%), Gaps = 1/415 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  + + +++ G +P L+TY  +V  L ++       +L++K+E   ++ D ++FN
Sbjct: 129 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 188

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I++  +  +VD+A+ +F++M+  G +P   TY++LI    + G+  ++ +LL  M + 
Sbjct: 189 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE- 247

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K + PN  T+N L+ A+  +    EA  +   M+   I PD  TYN+L   +  +    +
Sbjct: 248 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 307

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A+QM   M +    P+  T   ++ G+CK   +ED       M    +  + V + +LI+
Sbjct: 308 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 367

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G     D D   K    M   GV PD++T+S ++D   + G + K  E+FD M K+ I+ 
Sbjct: 368 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 427

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           DI++++ + +G  +AG+      +  S+   GV PNVV + T+ISG C+   +Q A ++ 
Sbjct: 428 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 487

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           +KM E G  P+  TY TL+  +        + EL++ M         STI LVA+
Sbjct: 488 KKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 542



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 116/473 (24%), Positives = 230/473 (48%), Gaps = 38/473 (8%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSL--ISKVEKDGMKPDSIL 66
           K  +A  +F  +++    P++  +  L++A+ + K+F  ++SL  + K+ K G +P  + 
Sbjct: 22  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVT 81

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            ++++N       + +A+ +  +M + G +P T T+ TLI G     K  E++ L+  M 
Sbjct: 82  LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 141

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           Q +  +PN  TY ++V   C +  I+ A+N++ KM A+ I+ D V +NT+  +  +Y   
Sbjct: 142 Q-RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 200

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A  +  EM+   +RPN  T   ++S  C  G   DA + L  M E +++PNLV FN+L
Sbjct: 201 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 260

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I  F+        +K    M +  + PD+ T++++++ +     + K +++F+ MV    
Sbjct: 261 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 320

Query: 307 EPDIHVFSILAKGYVRA-----------------------------------GEPQKAES 331
            PD+  ++ L KG+ ++                                   G+   A+ 
Sbjct: 321 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 380

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +   M   GV P+++ ++ ++ G CN  K+++A+ +++ M +  I  ++  Y T++ G  
Sbjct: 381 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 440

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           +A +     +L   +  KGV+P   T   +     +  L +EA  +LK  +ED
Sbjct: 441 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 493



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 143/301 (47%), Gaps = 1/301 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  +A  + + +IE+   P L+T+  L+ A  ++ +F     L   + K  +
Sbjct: 226 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 285

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +N++IN       +D+A ++F+ M    C P   TYNTLIKG+    + E+  +
Sbjct: 286 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 345

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + MS  + +  +  TY  L++        + A  V  +MV+ G+ PD +TY+ L    
Sbjct: 346 LFREMSH-RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 404

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G+  +A ++   MQ ++++ +      ++ G CK G ++D       +    V PN+
Sbjct: 405 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 464

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N++I G    +        L  M+E G  PD  T++T++ A    G      E+  +
Sbjct: 465 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 524

Query: 301 M 301
           M
Sbjct: 525 M 525



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 3/251 (1%)

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            P  R C  +   + K+  ++DA+     M +    P++  FN L+     +K  D V  
Sbjct: 4   HPRRRDCLFVGISWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVIS 63

Query: 262 ALTL--MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
              L  M + G +P +VT S++++ +     +     + D MV+ G  PD   F+ L  G
Sbjct: 64  LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 123

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
                +  +A +++  M + G  PN+V +  V++G C    +  A ++  KM    I  +
Sbjct: 124 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 183

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           +  + T++    + +    A  L + ME KG+RP   T   +     + G   +A ++L 
Sbjct: 184 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 243

Query: 440 SAEEDRQSMPN 450
              E + + PN
Sbjct: 244 DMIEKKIN-PN 253


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 8/491 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+P  A  + N +  +G     ++Y  +++   ++        L  ++ K G+ PD + F
Sbjct: 160 GRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTF 219

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I+   + GNV E+ K+F K+   G  P   T+N  I+G    G  +E+ +LL+ +  
Sbjct: 220 NKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVS 279

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  + P+  +YN L+  +C  + + EA   ++KMV SG++P+  TYNT+   + + G   
Sbjct: 280 E-GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQ 338

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A+++L +       P+E T   +++G C +G+M  AM   Y   E     +++++N+L+
Sbjct: 339 NADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV 398

Query: 248 KGFLDIKDSDGVDKALTLME---EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           KG   +     V +AL LM+   E G  PD+ T++ +++     G +     I +D +  
Sbjct: 399 KG---LSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAK 455

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G  PDI  F+ L  GY +     KA  IL +M  +G+ P+V+ + T+++G C A K+   
Sbjct: 456 GCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNV 515

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           +  ++ M E G  PN+ TY  L+  + + ++   A EL + M+ +G+ P   T+  +   
Sbjct: 516 VDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICG 575

Query: 425 WRAIGLAREAKRVLKSAEEDRQ-SMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSE 483
             + G   +A  +  + E++ + S       I + +   K N+S +   F ++ G   + 
Sbjct: 576 LCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAP 635

Query: 484 HNGSSAAKIRS 494
            N +    I S
Sbjct: 636 DNYTYRVMIDS 646



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 222/443 (50%), Gaps = 4/443 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MNILV  G   +AH ++  + + G  P + T+T  + +     R  + L L++ +   G 
Sbjct: 118 MNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGC 177

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + +++ + A+I+   +     EA  +F +M   G  P   T+N LI      G  +ES K
Sbjct: 178 EFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEK 237

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   + + + V PN  T+NI ++  C K +I+EA  ++  +V+ G+ PD ++YNTL   +
Sbjct: 238 LFSKVMK-RGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGF 296

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            ++ +   AE  L +M N+ V PNE T   I++G+CK G M++A + L         P+ 
Sbjct: 297 CKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDE 356

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             ++SLI G  +  D +          E G K  ++ ++T++   S  GL+ +  ++  D
Sbjct: 357 FTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKD 416

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M++ G  PDI  ++++  G  + G    A  IL      G  P++  F T+I G+C    
Sbjct: 417 MMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRN 476

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M +A+ I + M   GI P++ TY TLL G  +A++     +  + M EKG  P   T  +
Sbjct: 477 MDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNI 536

Query: 421 VADSW---RAIGLAREAKRVLKS 440
           + +S+   R +  A E  + +K+
Sbjct: 537 LIESFCKDRKVSEAMELFKEMKT 559



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 106/453 (23%), Positives = 201/453 (44%), Gaps = 37/453 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L  KG   E+  +F+ +++ G  P L T+   +  L R+        L+  +  +G+
Sbjct: 223 IHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGL 282

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I +N +I    +   + EA     KM +SG +P   TYNT+I G+   G  + + K
Sbjct: 283 TPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADK 342

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+  +  K   P++ TY+ L+   C+   +  A  V Y+ +  G +   + YNTL +  
Sbjct: 343 ILR-DAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGL 401

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG-------------------------- 214
           ++ G   +A Q++ +M  +   P+  T  ++V+G                          
Sbjct: 402 SKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDI 461

Query: 215 ---------YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
                    YCK+ NM+ A+  L  M    + P+++ +N+L+ G    +  D V      
Sbjct: 462 FTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKA 521

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M E G  P+++T++ +++++     + +  E+F +M   G+ PDI     L  G    GE
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581

Query: 326 PQKAESILTSMRK-YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
             KA  +  ++ K Y    +  +F  +I+ +C  + +  A  ++ KM      P+  TY 
Sbjct: 582 LDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYR 641

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            ++  Y +      A   L     KG+ P  +T
Sbjct: 642 VMIDSYCKTGNIDLAHTFLLENISKGLVPSFTT 674



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/441 (24%), Positives = 213/441 (48%), Gaps = 11/441 (2%)

Query: 7   KGKPHEAHYIFNCL-IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK--DGMKPD 63
           +  P  A  +FN +  E+G + TL TY  ++  L    +F+++  +++++ K  D    +
Sbjct: 17  QNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLE 76

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +    M +     G V EA+ +F++M    C+P+  +YN ++      G   ++ K+  
Sbjct: 77  GVYIGIMRDY-GRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYM 135

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +D  + P+  T+ I ++++C       A  ++  M   G + +AV+Y  +   + + 
Sbjct: 136 RM-KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKE 194

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                A  +  EM    + P+  T   ++   CK+GN++++ +   ++ +  V PNL  F
Sbjct: 195 NCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTF 254

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N  I+G         +D+A  L+E     G+ PDV++++T++  +     + + +     
Sbjct: 255 NIFIQGLCR---KGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHK 311

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV +G+EP+   ++ +  G+ +AG  Q A+ IL      G  P+   ++++I+G CN   
Sbjct: 312 MVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGD 371

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M RAM+++ +  E G   ++  Y TL+ G  +     +A +L++ M E G  P   T  L
Sbjct: 372 MNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNL 431

Query: 421 VADSWRAIGLAREAKRVLKSA 441
           V +    +G   +A  +L  A
Sbjct: 432 VVNGLCKMGCLSDANGILNDA 452



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 114/232 (49%), Gaps = 10/232 (4%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           I + ++  G  P +ITY TL+  L + ++  +++     + + G  P+ I +N +I +  
Sbjct: 483 ILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFC 542

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           +   V EAM++F++MK  G  P   T  TLI G  + G+ +++ +L   + ++     + 
Sbjct: 543 KDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYST 602

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
             +NI++ A+C K ++  A  + +KM  S   PD  TY  +  +Y + G    A   L E
Sbjct: 603 AIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLE 662

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
             +  + P+  TCG +++  C            +R+ E  V  NL+V N ++
Sbjct: 663 NISKGLVPSFTTCGKVLNCLC----------VTHRLSEAVVIINLMVQNGIV 704


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 207/391 (52%), Gaps = 1/391 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A   F+ ++ +G  P + TY  L+ AL  +   K  LS++  +   G  P+ + +N ++ 
Sbjct: 134 ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVA 193

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
           A   +G VD A ++   M D G KP   T+N+++ G    GK E++ K+   M ++  + 
Sbjct: 194 AFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMRE-GLA 252

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+  +YN LV  +C      EA +V  +M   GI PD VT+ +L     + G    A  +
Sbjct: 253 PDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTL 312

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           + +M+   ++ NE T   ++ G+CK+G ++DA+  +  M++  + P++V +N+LI G+  
Sbjct: 313 VRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCM 372

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +   D   + L  ME  G+KPDVVT+STI+ A+          E+   M++ G+ PD   
Sbjct: 373 VGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAIT 432

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           +S L +          A  +  +M K G+ P+   +T++I G C    ++RA+S+++KM 
Sbjct: 433 YSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMV 492

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           + G+ P++ TY  L+ G  ++ +   A++LL
Sbjct: 493 KAGVLPDVVTYSVLINGLSKSARAMEAQQLL 523



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 188/368 (51%), Gaps = 1/368 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G+G   EA  I   +   G  P ++TY TLVAA  R         L+  +   G+KP+
Sbjct: 160 LCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPN 219

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + FN+M+N   ++G +++A K+F +M   G  P   +YNTL+ GY   G   E+L +  
Sbjct: 220 LVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFA 279

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M+Q K + P+  T+  L+   C   ++E A  +V +M   G+Q + VT+  L   + + 
Sbjct: 280 EMTQ-KGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKK 338

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A   +  M+  +++P+      +++GYC  G M++A   L+ M+   + P++V +
Sbjct: 339 GFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTY 398

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           +++I  +    D+    +    M E GV PD +T+S+++        +     +F +M+K
Sbjct: 399 STIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIK 458

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G++PD   ++ L  G+ + G  ++A S+   M K GV P+VV ++ +I+G   + +   
Sbjct: 459 LGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAME 518

Query: 364 AMSIYEKM 371
           A  +  K+
Sbjct: 519 AQQLLFKL 526



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 219/422 (51%), Gaps = 22/422 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +   GK  +A  +F+ ++ EG  P  ++Y TLV    +       LS+ +++ + G+
Sbjct: 227 VNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGI 286

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + F ++I+   ++GN++ A+ + ++M++ G +    T+  LI G+   G  +++L 
Sbjct: 287 MPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALL 346

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            ++ M Q + +KP+   YN L+  +C    ++EA  ++++M A G++PD VTY+T+  AY
Sbjct: 347 AVRGMRQCR-IKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAY 405

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +T+ A ++  +M    V P+  T   ++   C+E  + DA      M +L + P+ 
Sbjct: 406 CKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDE 465

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             + SLI G    K+ + V++AL+L   M + GV PDVVT+S +++  S +    + Q++
Sbjct: 466 FTYTSLIDG--HCKEGN-VERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQL 522

Query: 298 ---------------FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
                          +D ++    + ++     L KG+   G   +A+ +  SM     +
Sbjct: 523 LFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWN 582

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
            +  +++ +I G C A  + +A+S +++M + G  PN  +  +L+ G  E      A+++
Sbjct: 583 LDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQV 642

Query: 403 LQ 404
           +Q
Sbjct: 643 IQ 644



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 161/324 (49%), Gaps = 2/324 (0%)

Query: 94  GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
           G  P+   YN ++    +      + +    M  D  V PN  TYNIL+RA C +   +E
Sbjct: 111 GYVPSVLAYNAVLLALSDASL-TSARRFFDSMLSD-GVAPNVYTYNILIRALCGRGHRKE 168

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A +++  M  +G  P+ VTYNTL  A+ + GE   AE+++  M +  ++PN  T   +V+
Sbjct: 169 ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVN 228

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
           G CK G MEDA +    M    + P+ V +N+L+ G+     S         M + G+ P
Sbjct: 229 GMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMP 288

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           DVVTF++++     AG +     +   M + G++ +   F+ L  G+ + G    A   +
Sbjct: 289 DVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAV 348

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             MR+  + P+VV +  +I+G+C   +M  A  +  +M   G+ P++ TY T++  Y + 
Sbjct: 349 RGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKN 408

Query: 394 KQPWRAEELLQVMEEKGVRPKKST 417
                A EL Q M EKGV P   T
Sbjct: 409 CDTHSAFELNQQMLEKGVLPDAIT 432



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/389 (23%), Positives = 174/389 (44%), Gaps = 55/389 (14%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N LVG     G  HEA  +F  + ++G  P ++T+T+L+  + +    +  ++L+ ++ +
Sbjct: 259 NTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRE 318

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G++ + + F A+I+   + G +D+A+   + M+    KP+   YN LI GY  VG+ +E
Sbjct: 319 RGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDE 378

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           + +LL  M + K +KP+  TY+ ++ A+C       A+ +  +M+  G+ PDA+TY++L 
Sbjct: 379 ARELLHEM-EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLI 437

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
           R   +      A  +   M    ++P+E T   ++ G+CKEGN+E A+    +M +  V 
Sbjct: 438 RVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVL 497

Query: 238 PNLVVFNSLIKG-------------------------------FLDIKDSDGVDKALTLM 266
           P++V ++ LI G                                +       +   L L+
Sbjct: 498 PDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALL 557

Query: 267 EEFGVKP-------------------DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           + F +K                    D   +S ++     AG + K       M++ G  
Sbjct: 558 KGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFA 617

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSM 336
           P+      L +G    G   +A+ ++  +
Sbjct: 618 PNSTSTISLIRGLFENGMVVEADQVIQQL 646



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 112/228 (49%)

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
           + ++  A RF   M    V PN+  +N LI+              L  M   G  P+VVT
Sbjct: 128 DASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVT 187

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           ++T++ A+  AG +   + +   M+  G++P++  F+ +  G  +AG+ + A  +   M 
Sbjct: 188 YNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMM 247

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
           + G+ P+ V + T++ G+C A     A+S++ +M + GI P++ T+ +L+    +A    
Sbjct: 248 REGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLE 307

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
            A  L++ M E+G++  + T   + D +   G   +A   ++   + R
Sbjct: 308 WAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCR 355



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 118/254 (46%), Gaps = 16/254 (6%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L  + +  +AH +F  +I+ G +P   TYT+L+    ++   +  LSL  K+ K G+
Sbjct: 437 IRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGV 496

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTL--------------- 105
            PD + ++ +IN  S+S    EA ++  K+      P  + Y+ L               
Sbjct: 497 LPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLAL 556

Query: 106 IKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
           +KG+   G   E+ K+ Q M  D+N   +   Y++L+   C   ++ +A +   +M+  G
Sbjct: 557 LKGFCMKGLMNEADKVYQSM-LDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRG 615

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
             P++ +  +L R   + G    A+Q++ ++ N     +      ++     EGN++  +
Sbjct: 616 FAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVL 675

Query: 226 RFLYRMKELEVHPN 239
             L+ M +  + P+
Sbjct: 676 DVLHGMAKDGLLPS 689


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 215/440 (48%), Gaps = 7/440 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA    + +++ G  P   TYT+L+    R K   +   +   + + G + + + +
Sbjct: 208 GNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSY 267

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+   E+G ++EA+K+F  M +  C PT  TY  LI      G+  E+L L   M +
Sbjct: 268 TNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEM-K 326

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +K  +PN  TY +L+   C +N ++EA  ++ +M   G+ P  VTYN L   Y + G   
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++L  M++N   PN RT   ++ G CK+  +  AM  L +M E ++ P+L+ +NSLI
Sbjct: 387 DAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI 446

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G   + D +   + L+LM E G+ PD  T+S  +D     G + +   +FD +   G++
Sbjct: 447 HGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVK 506

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
            +  +++ L  GY + G+   A S+L  M      PN   +  +I G C   KM+ A S+
Sbjct: 507 ANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSL 566

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV---MEEKGVRPKKSTIQLVADS 424
             KM  +G+ P + TY  L+   GE  +    +  L+V   M   G +P   T      +
Sbjct: 567 VAKMLTMGVKPTVVTYTILI---GEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHA 623

Query: 425 WRAIGLAREAKRVLKSAEED 444
           + + G+  E   V+    E+
Sbjct: 624 YFSQGMLEEVDDVIAKMNEE 643



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 222/494 (44%), Gaps = 54/494 (10%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G G+  EA  +FN + E+G  P + TYT L+  L ++ +      ++S++ + G+ P 
Sbjct: 309 LSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPS 368

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +NA+I+   + G +D+A +I   M+ + C P T TYN LI G     K  +++ LL 
Sbjct: 369 VVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLN 428

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + K + P+  TYN L+   C  N +E A+ ++  M  +G+ PD  TY+       + 
Sbjct: 429 KMLERK-LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKE 487

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A  +   ++   V+ NE     ++ GYCK G ++ A   L RM      PN   +
Sbjct: 488 GRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTY 547

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N LI+G    K        +  M   GVKP VVT++ ++      G      ++F+ MV 
Sbjct: 548 NVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVS 607

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC------- 356
            G +PD+  ++     Y   G  ++ + ++  M + G+ P++V +T +I G+        
Sbjct: 608 LGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHR 667

Query: 357 ------------------------------NAVKMQR----------------AMSIYEK 370
                                         N +K  R                A+ ++EK
Sbjct: 668 AFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEK 727

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M E G   ++  Y  L+ G+ + ++   A+ L+  M+E+G+ P +     + D    +G+
Sbjct: 728 MVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGV 787

Query: 431 AREAKRVLKSAEED 444
             EA R++ +  E+
Sbjct: 788 YAEAVRLVDAMVEN 801



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 202/418 (48%), Gaps = 1/418 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+ +EA  +F  + E+   PT+ TYT L+ AL+   R    L+L +++++ G +P+
Sbjct: 274 LCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPN 333

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +  +I+   +   +DEA K+  +M + G  P+  TYN LI GY   G  +++ ++L 
Sbjct: 334 VHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILD 393

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           LM +  +  PN RTYN L+   C K  + +A  ++ KM+   + P  +TYN+L     + 
Sbjct: 394 LM-ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKV 452

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +   A ++L  M  N + P++ T  + +   CKEG +E+A      +K   V  N V++
Sbjct: 453 NDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIY 512

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            +LI G+  +   D     L  M      P+  T++ +++       M +   +   M+ 
Sbjct: 513 TALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLT 572

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G++P +  ++IL    ++ G    A  +   M   G  P+V  +T  +  + +   ++ 
Sbjct: 573 MGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEE 632

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
              +  KM E GI P+L TY  L+ GY       RA + L+ M + G +P    + ++
Sbjct: 633 VDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSIL 690



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/473 (24%), Positives = 212/473 (44%), Gaps = 54/473 (11%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  K K H+A  + N ++E    P+LITY +L+    +    +S   L+S + ++G+ PD
Sbjct: 414 LCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPD 473

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              ++  I+   + G V+EA  +F  +K  G K     Y  LI GY  VGK + +  LL+
Sbjct: 474 QWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLE 533

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D  + PN  TYN+L+   C +  ++EA ++V KM+  G++P  VTY  L     + 
Sbjct: 534 RMLNDACL-PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKD 592

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A ++   M +   +P+  T    +  Y  +G +E+    + +M E  + P+LV +
Sbjct: 593 GAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTY 652

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ-------- 295
             LI G+  +  +      L  M + G KP +   S ++   S    M + +        
Sbjct: 653 TVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSV 712

Query: 296 ----------EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
                     ++F+ MV+ G   D+ ++  L  G+ +    ++A+ ++  M++ G+ P+ 
Sbjct: 713 SNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSE 772

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG---------------- 389
            ++ +++   C       A+ + + M E G+ P L++Y+ L+ G                
Sbjct: 773 DIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHG 832

Query: 390 -----YGEAKQPWR--------------AEELLQVMEEKGVRPKKSTIQLVAD 423
                Y   +  W+                EL+ +MEEKG +P   T  L+ +
Sbjct: 833 LLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIE 885



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 199/440 (45%), Gaps = 26/440 (5%)

Query: 10  PHEAHYIFNCL-IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           P  A   FN + +  G +  + +Y++++  L R +    +L +  K+             
Sbjct: 81  PQTALSFFNWIALRPGFKHNVHSYSSMLNILIRAR----LLGVAEKIRI----------- 125

Query: 69  AMINACSESGNVDEAMKIFQKMKDSG---CKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
           +MI +C    +V   +++F+KM   G    KPT   YNT++         +E +K + L 
Sbjct: 126 SMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDE-MKTVYLE 184

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
             +  + PN  T+N +V  +C   ++ EA     K+V +G+ PD  TY +L   + +   
Sbjct: 185 LLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKG 244

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A ++   M     + NE +   ++ G C+ G + +A++    M E    P +  +  
Sbjct: 245 VDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTV 304

Query: 246 LIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           LI     +  S    +AL L   M+E G +P+V T++ ++D       M + +++  +M 
Sbjct: 305 LIYA---LSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMS 361

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           + G+ P +  ++ L  GY + G    A  IL  M      PN   +  +I G C   K+ 
Sbjct: 362 EKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVH 421

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
           +AM++  KM E  ++P+L TY +L+ G  +      A  LL +M E G+ P + T  +  
Sbjct: 422 KAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFI 481

Query: 423 DSWRAIGLAREAKRVLKSAE 442
           D+    G   EA  +  S +
Sbjct: 482 DTLCKEGRVEEAGTLFDSVK 501



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/407 (24%), Positives = 178/407 (43%), Gaps = 19/407 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G+  EA  +F+ +  +G +   + YT L+    +  +     SL+ ++  D  
Sbjct: 481 IDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDAC 540

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+S  +N +I    +   + EA  +  KM   G KPT  TY  LI      G  + +LK
Sbjct: 541 LPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALK 600

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M      +P+  TY   + A+ S+  +EE  +V+ KM   GI PD VTY  L   Y
Sbjct: 601 VFNHMVS-LGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGY 659

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM------------------E 222
           A+ G T+RA   L  M +   +P+     I++     E  M                  E
Sbjct: 660 ARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYE 719

Query: 223 DAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIM 282
            A++   +M E     ++ ++ +LI GF   +  +     +  M+E G+ P    +++++
Sbjct: 720 IALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLL 779

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
           D     G+  +   + D MV+ G+ P +  + +L  G    G  +KA+++   +   G +
Sbjct: 780 DCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYN 839

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
            + V +  +I G      +     + + M E G  PN  TY  L+ G
Sbjct: 840 YDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEG 886



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 93/388 (23%), Positives = 164/388 (42%), Gaps = 58/388 (14%)

Query: 115 PEESLKLLQLMSQDKNVKPNDRTY----NILVRA----------------WCSKNSIEEA 154
           P+ +L     ++     K N  +Y    NIL+RA                 CS   +   
Sbjct: 81  PQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFV 140

Query: 155 WNVVYKMVASG---IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
             V  KM A G    +P    YNT+  + +++      + +  E+ NNQ+ PN  T   +
Sbjct: 141 LEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAM 200

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG------------- 258
           V+GYCK GN+ +A  +  ++ +  +HP+   + SLI G    K  D              
Sbjct: 201 VNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGC 260

Query: 259 -------------------VDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
                              +++AL L   M E    P V T++ ++ A S +G   +   
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALN 320

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F++M + G EP++H +++L  G  +  +  +A  +L+ M + G+ P+VV +  +I G+C
Sbjct: 321 LFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYC 380

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
               +  A  I + M      PN +TY  L+ G  + ++  +A  LL  M E+ + P   
Sbjct: 381 KEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLI 440

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEED 444
           T   +      +     A R+L    E+
Sbjct: 441 TYNSLIHGQCKVNDLESAYRLLSLMNEN 468


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 206/397 (51%), Gaps = 7/397 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P +++Y+T++         + +L LI +++  G+KP+   +N++I    +SG VD+A
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            ++ ++M + G  P T  Y TLI G+  +G  + + KL   M + + V P+   Y  ++ 
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIV-PDFIAYTAVIC 123

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C    + EA  V  KM + G++PD VTY TL   Y + GE  +A  +  +M  + + P
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  T   +  G CK G ++ A   L+ M    +  N+  +NSL+ G      S  + +A+
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCK---SGNIRQAV 240

Query: 264 TLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
            LMEE    G+ PD +TF+T+MDA+   G M K  E+  +M+  G++P +  F++L  G+
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
             +G  +  E +L  M + G+ PN   + +++  +C    M+    IY+ MC  G+ P+ 
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDS 360

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            TY  L+ G+ +A+    A  L + M EKG     S+
Sbjct: 361 NTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASS 397



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 173/331 (52%), Gaps = 7/331 (2%)

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           MK  G  P   +Y+T+I GY   G+ ++ LKL+Q M Q K +KPN  TYN ++   C   
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEM-QMKGLKPNLYTYNSIILLLCKSG 59

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            +++A  V+ +M+  GI PD V Y TL   + + G    A ++  EM+  ++ P+     
Sbjct: 60  KVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYT 119

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---M 266
            ++ G C+ G M +A +   +M    V P+ V + +LI G+     S  ++KA +L   M
Sbjct: 120 AVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYC---KSGEMEKAFSLHNQM 176

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            + G+ P+VVT++ + D     G +    E+  +M   G++ +I  ++ L  G  ++G  
Sbjct: 177 VQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNI 236

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           ++A  ++  M   G++P+ + FTT++  +C   +M +A  +  +M + G+ P + T+  L
Sbjct: 237 RQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVL 296

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           + G+  +      E LL  M EKG+ P  +T
Sbjct: 297 MNGFCMSGMLEDGERLLAWMLEKGIMPNTTT 327



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 187/392 (47%), Gaps = 2/392 (0%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           +L   GK  +A  +   +I +G  P  + YTTL+    +    ++   L  ++EK  + P
Sbjct: 54  LLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVP 113

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D I + A+I      G + EA K+F KM   G +P   TY TLI GY   G+ E++  L 
Sbjct: 114 DFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLH 173

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             M Q   + PN  TY  L    C    ++ A  ++++M   G+Q +  TYN+L     +
Sbjct: 174 NQMVQ-SGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCK 232

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G   +A +++ EM+   + P+  T   ++  YCK G M  A   L  M +  + P ++ 
Sbjct: 233 SGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVIT 292

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           FN L+ GF      +  ++ L  M E G+ P+  T++++M  +     M    EI+  M 
Sbjct: 293 FNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMC 352

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G+ PD + ++IL KG+ +A   ++A  +   M + G +     + ++I G+    K+ 
Sbjct: 353 ARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKIS 412

Query: 363 RAMSIYEKMCEIGINPNLKTYETLL-WGYGEA 393
            A  ++E+M   G+  + + Y   +   YGE 
Sbjct: 413 EARELFEEMRREGMAADAEIYNLFVDISYGEG 444



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 171/318 (53%), Gaps = 1/318 (0%)

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+  +Y+ ++  +C    +++   ++ +M   G++P+  TYN++     + G+   AE++
Sbjct: 8   PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           L EM N  + P+      ++ G+CK GN++ A +    M++  + P+ + + ++I G   
Sbjct: 68  LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
                  DK    M   GV+PD VT++T++D +  +G M K   + + MV++G+ P++  
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVT 187

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++ LA G  + G+   A  +L  M   G+  N+  + ++++G C +  +++A+ + E+M 
Sbjct: 188 YTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEME 247

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
             G+ P+  T+ TL+  Y +  +  +A ELL+ M ++G++P   T  ++ + +   G+  
Sbjct: 248 VAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLE 307

Query: 433 EAKRVLKSAEEDRQSMPN 450
           + +R+L    E +  MPN
Sbjct: 308 DGERLLAWMLE-KGIMPN 324



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 147/296 (49%), Gaps = 1/296 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A  + N +++ G  P ++TYT L   L +  +  +   L+ ++   G++ +   +
Sbjct: 164 GEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTY 223

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N+++N   +SGN+ +A+K+ ++M+ +G  P T T+ TL+  Y   G+  ++ +LL+ M  
Sbjct: 224 NSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREM-L 282

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D+ ++P   T+N+L+  +C    +E+   ++  M+  GI P+  TYN+L + Y       
Sbjct: 283 DRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMR 342

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
              ++   M    V P+  T  I++ G+CK  NM++A      M E   +     +NS+I
Sbjct: 343 CTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSII 402

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           KGF   K      +    M   G+  D   ++  +D     G M    E+ D+ ++
Sbjct: 403 KGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIE 458



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 60/110 (54%)

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M+  G  P+VV ++TVI+G+C   ++Q+ + + ++M   G+ PNL TY +++    ++ +
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
              AE +L+ M  +G+ P       + D +  +G  + A ++    E+ R
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQR 110


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 215/440 (48%), Gaps = 7/440 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA    + +++ G  P   TYT+L+    R K   +   +   + + G + + + +
Sbjct: 208 GNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSY 267

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+   E+G ++EA+K+F  M +  C PT  TY  LI      G+  E+L L   M +
Sbjct: 268 TNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEM-K 326

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +K  +PN  TY +L+   C +N ++EA  ++ +M   G+ P  VTYN L   Y + G   
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++L  M++N   PN RT   ++ G CK+  +  AM  L +M E ++ P+L+ +NSLI
Sbjct: 387 DAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI 446

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G   + D +   + L+LM E G+ PD  T+S  +D     G + +   +FD +   G++
Sbjct: 447 HGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVK 506

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
            +  +++ L  GY + G+   A S+L  M      PN   +  +I G C   KM+ A S+
Sbjct: 507 ANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSL 566

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV---MEEKGVRPKKSTIQLVADS 424
             KM  +G+ P + TY  L+   GE  +    +  L+V   M   G +P   T      +
Sbjct: 567 VAKMLTMGVKPTVVTYTILI---GEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHA 623

Query: 425 WRAIGLAREAKRVLKSAEED 444
           + + G+  E   V+    E+
Sbjct: 624 YFSQGMLEEVDDVIAKMNEE 643



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 185/384 (48%), Gaps = 1/384 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G G+  EA  +FN + E+G  P + TYT L+  L ++ +      ++S++ + G+ P 
Sbjct: 309 LSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPS 368

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +NA+I+   + G +D+A +I   M+ + C P T TYN LI G     K  +++ LL 
Sbjct: 369 VVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLN 428

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + K + P+  TYN L+   C  N +E A+ ++  M  +G+ PD  TY+       + 
Sbjct: 429 KMLERK-LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKE 487

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A  +   ++   V+ NE     ++ GYCK G ++ A   L RM      PN   +
Sbjct: 488 GRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTY 547

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N LI+G    K        +  M   GVKP VVT++ ++      G      ++F+ MV 
Sbjct: 548 NVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVS 607

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G +PD+  ++     Y   G  ++ + ++  M + G+ P++V +T +I G+       R
Sbjct: 608 LGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHR 667

Query: 364 AMSIYEKMCEIGINPNLKTYETLL 387
           A    + M + G  P+L     L+
Sbjct: 668 AFDFLKCMVDTGCKPSLYIVSILI 691



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 202/418 (48%), Gaps = 1/418 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+ +EA  +F  + E+   PT+ TYT L+ AL+   R    L+L +++++ G +P+
Sbjct: 274 LCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPN 333

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +  +I+   +   +DEA K+  +M + G  P+  TYN LI GY   G  +++ ++L 
Sbjct: 334 VHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILD 393

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           LM +  +  PN RTYN L+   C K  + +A  ++ KM+   + P  +TYN+L     + 
Sbjct: 394 LM-ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKV 452

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +   A ++L  M  N + P++ T  + +   CKEG +E+A      +K   V  N V++
Sbjct: 453 NDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIY 512

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            +LI G+  +   D     L  M      P+  T++ +++       M +   +   M+ 
Sbjct: 513 TALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLT 572

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G++P +  ++IL    ++ G    A  +   M   G  P+V  +T  +  + +   ++ 
Sbjct: 573 MGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEE 632

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
              +  KM E GI P+L TY  L+ GY       RA + L+ M + G +P    + ++
Sbjct: 633 VDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSIL 690



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 199/440 (45%), Gaps = 26/440 (5%)

Query: 10  PHEAHYIFNCL-IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           P  A   FN + +  G +  + +Y++++  L R +    +L +  K+             
Sbjct: 81  PQTALSFFNWIALRPGFKHNVHSYSSMLNILIRAR----LLGVAEKIRI----------- 125

Query: 69  AMINACSESGNVDEAMKIFQKMKDSG---CKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
           +MI +C    +V   +++F+KM   G    KPT   YNT++         +E +K + L 
Sbjct: 126 SMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDE-MKTVYLE 184

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
             +  + PN  T+N +V  +C   ++ EA     K+V +G+ PD  TY +L   + +   
Sbjct: 185 LLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKG 244

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A ++   M     + NE +   ++ G C+ G + +A++    M E    P +  +  
Sbjct: 245 VDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTV 304

Query: 246 LIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           LI     +  S    +AL L   M+E G +P+V T++ ++D       M + +++  +M 
Sbjct: 305 LIYA---LSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMS 361

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           + G+ P +  ++ L  GY + G    A  IL  M      PN   +  +I G C   K+ 
Sbjct: 362 EKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVH 421

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
           +AM++  KM E  ++P+L TY +L+ G  +      A  LL +M E G+ P + T  +  
Sbjct: 422 KAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFI 481

Query: 423 DSWRAIGLAREAKRVLKSAE 442
           D+    G   EA  +  S +
Sbjct: 482 DTLCKEGRVEEAGTLFDSVK 501



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/383 (23%), Positives = 165/383 (43%), Gaps = 30/383 (7%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G+  EA  +F+ +  +G +   + YT L+    +  +     SL+ ++  D  
Sbjct: 481 IDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDAC 540

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+S  +N +I    +   + EA  +  KM   G KPT  TY  LI      G  + +LK
Sbjct: 541 LPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALK 600

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M      +P+  TY   + A+ S+  +EE  +V+ KM   GI PD VTY  L   Y
Sbjct: 601 VFNHMVS-LGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGY 659

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM------------------- 221
           A+ G T+RA   L  M +   +P+     I++     E  M                   
Sbjct: 660 ARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVD 719

Query: 222 ----------EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
                     E A++   +M E     ++ ++ +LI GF   +  +     +  M+E G+
Sbjct: 720 IADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGM 779

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            P    +++++D     G+  +   + D MV+ G+ P +  + +L  G    G  +KA++
Sbjct: 780 SPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKA 839

Query: 332 ILTSMRKYGVHPNVVMFTTVISG 354
           +   +   G + + V +  +I G
Sbjct: 840 VFHGLLSCGYNYDEVAWKVLIDG 862



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/388 (23%), Positives = 162/388 (41%), Gaps = 58/388 (14%)

Query: 115 PEESLKLLQLMSQDKNVKPNDRTY----NILVRA----------------WCSKNSIEEA 154
           P+ +L     ++     K N  +Y    NIL+RA                 CS   +   
Sbjct: 81  PQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFV 140

Query: 155 WNVVYKMVASG---IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
             V  KM A G    +P    YNT+  + +++      + +  E+ NNQ+ PN  T   +
Sbjct: 141 LEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAM 200

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           V+GYCK GN+ +A  +  ++ +  +HP+   + SLI G    K  D   +   +M + G 
Sbjct: 201 VNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGC 260

Query: 272 K-----------------------------------PDVVTFSTIMDAWSSAGLMGKCQE 296
           +                                   P V T++ ++ A S +G   +   
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALN 320

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F++M + G EP++H +++L  G  +  +  +A  +L+ M + G+ P+VV +  +I G+C
Sbjct: 321 LFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYC 380

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
               +  A  I + M      PN +TY  L+ G  + ++  +A  LL  M E+ + P   
Sbjct: 381 KEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLI 440

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEED 444
           T   +      +     A R+L    E+
Sbjct: 441 TYNSLIHGQCKVNDLESAYRLLSLMNEN 468



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/144 (20%), Positives = 71/144 (49%), Gaps = 3/144 (2%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  ++E G    +  Y  L+A   +Q+R +    L+  +++ GM P   ++N++++ C 
Sbjct: 735 LFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCC 794

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ-LMSQDKNVKPN 134
           + G   EA+++   M ++G  P   +Y  L+ G    G  E++  +   L+S   N   +
Sbjct: 795 KLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNY--D 852

Query: 135 DRTYNILVRAWCSKNSIEEAWNVV 158
           +  + +L+     ++ ++E   ++
Sbjct: 853 EVAWKVLIDGLLKRDLVDECSELI 876


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 206/388 (53%), Gaps = 1/388 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           RP++  +   + +  ++K++ +++SL ++++  G+  +    N +IN      +VD A+ 
Sbjct: 85  RPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVS 144

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           I  KM   G  PT ST+N LI G  N GK +E+++L   M + +  +PN  +YN ++   
Sbjct: 145 ILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVR-RGHEPNVISYNTIINGL 203

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C   +   A +V  KM  +G +PD VTYNT+  +  +      A + L EM +  + PN 
Sbjct: 204 CKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNV 263

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   +V G+C  G + +A R    M   +V P+ V    L+ G                
Sbjct: 264 FTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFET 323

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M E GV+P++ T++ +MD +    LM + +++F+ M++ G  P +H ++IL  G+ ++  
Sbjct: 324 MTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRR 383

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A+S+L  M    ++P+ V ++T++ G C   + + A++I+++MC  G+ PNL TY  
Sbjct: 384 MDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSI 443

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           LL G+ +      A +LL+ M+EK + P
Sbjct: 444 LLDGFCKHGHLDEALKLLKSMQEKKLEP 471



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 206/420 (49%), Gaps = 2/420 (0%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           +   L+  L R       +S++ K+ K G+ P +  FNA+IN     G + EA+++F +M
Sbjct: 125 SLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEM 184

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
              G +P   +YNT+I G    G    ++ + + M Q+   KP+  TYN ++ + C    
Sbjct: 185 VRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQN-GCKPDVVTYNTIIDSLCKDRL 243

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           + +A   + +M+  GI P+  TYN +   +   G+   A ++  EM    V P+  T  I
Sbjct: 244 VNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTI 303

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           +V G CKEG + +A      M E  V PN+  +N+L+ G+   +  +   K   +M   G
Sbjct: 304 LVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQG 363

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
             P V +++ +++ +  +  M + + +  +M    + PD   +S L +G  + G P++A 
Sbjct: 364 CAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEAL 423

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           +I   M  YG+ PN+V ++ ++ G+C    +  A+ + + M E  + PN+  +  L+ G 
Sbjct: 424 NIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGM 483

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
             A +   A+EL   +   G+RP   T  ++       GL+ EA  + +  E+D   +PN
Sbjct: 484 FIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDD-GFLPN 542



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 199/421 (47%), Gaps = 8/421 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           + + G  PT  T+  L+  L  + + K  + L +++ + G +P+ I +N +IN   ++GN
Sbjct: 149 MFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGN 208

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
              A+ +F+KM+ +GCKP   TYNT+I          ++++ L  M  D+ + PN  TYN
Sbjct: 209 TSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEM-LDRGIPPNVFTYN 267

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            +V  +C    + EA  +  +MV   + PD VT   L     + G    A  +   M   
Sbjct: 268 CMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEK 327

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            V PN  T   ++ GYC +  M +A +    M      P +  +N LI GF   +  D  
Sbjct: 328 GVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEA 387

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
              L  M    + PD VT+ST+M      G   +   IF +M   G+ P++  +SIL  G
Sbjct: 388 KSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDG 447

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           + + G   +A  +L SM++  + PN+V  T +I G   A K++ A  ++ K+   GI P 
Sbjct: 448 FCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPT 507

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV-------ADSWRAIGLAR 432
           ++TY  ++ G  +      A +L + ME+ G  P   +  ++        DS  AI L  
Sbjct: 508 IRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLID 567

Query: 433 E 433
           E
Sbjct: 568 E 568



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 208/423 (49%), Gaps = 1/423 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +GK  EA  +FN ++  GH P +I+Y T++  L +       + +  K+E++G 
Sbjct: 165 INGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGC 224

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD + +N +I++  +   V++AM+   +M D G  P   TYN ++ G+  +G+  E+ +
Sbjct: 225 KPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATR 284

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M   ++V P+  T  ILV   C +  + EA  V   M   G++P+  TYN L   Y
Sbjct: 285 LFKEMV-GRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGY 343

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                   A+++   M      P   +  I+++G+CK   M++A   L  M    ++P+ 
Sbjct: 344 CLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDT 403

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +++L++G                M  +G+ P++VT+S ++D +   G + +  ++   
Sbjct: 404 VTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKS 463

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M +  +EP+I   +IL +G   AG+ + A+ + + +   G+ P +  +T +I G      
Sbjct: 464 MQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGL 523

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
              A  ++ KM + G  PN  +Y  ++ G+ + +    A  L+  M  K      ST Q+
Sbjct: 524 SDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQM 583

Query: 421 VAD 423
           + D
Sbjct: 584 LLD 586



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 161/362 (44%), Gaps = 40/362 (11%)

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK--NVKPNDR 136
           ++D+A+  F +M     +P+ + +   +   G+  K ++   ++ L +Q     V  N  
Sbjct: 68  SIDDALASFYRMVRMNPRPSVAEFGKFL---GSFAKKKQYSTVVSLCNQMDLFGVTHNVY 124

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           + N+L+   C  N ++ A +++ KM   GI P A T+N L                    
Sbjct: 125 SLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNAL-------------------- 164

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
                          ++G C EG +++A+     M      PN++ +N++I G     ++
Sbjct: 165 ---------------INGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNT 209

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
                    ME+ G KPDVVT++TI+D+     L+    E   +M+  GI P++  ++ +
Sbjct: 210 SMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCM 269

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G+   G+  +A  +   M    V P+ V  T ++ G C    +  A  ++E M E G+
Sbjct: 270 VHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGV 329

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            PN+ TY  L+ GY   +    A+++ ++M  +G  P   +  ++ + +       EAK 
Sbjct: 330 EPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKS 389

Query: 437 VL 438
           +L
Sbjct: 390 LL 391



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 107/242 (44%)

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           RP+    G  +  + K+      +    +M    V  N+   N LI     +   D    
Sbjct: 85  RPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVS 144

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            L  M + G+ P   TF+ +++   + G + +  E+F++MV+ G EP++  ++ +  G  
Sbjct: 145 ILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLC 204

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           + G    A  +   M + G  P+VV + T+I   C    +  AM    +M + GI PN+ 
Sbjct: 205 KTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVF 264

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY  ++ G+    Q   A  L + M  + V P   T+ ++ D     G+  EA+ V ++ 
Sbjct: 265 TYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETM 324

Query: 442 EE 443
            E
Sbjct: 325 TE 326



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 1/242 (0%)

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
           G  VS      +++DA+   YRM  +   P++  F   +  F   K    V      M+ 
Sbjct: 57  GGFVSNNSTNISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDL 116

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
           FGV  +V + + +++       +     I   M K GI P    F+ L  G    G+ ++
Sbjct: 117 FGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKE 176

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  +   M + G  PNV+ + T+I+G C       A+ +++KM + G  P++ TY T++ 
Sbjct: 177 AVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIID 236

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSM 448
              + +    A E L  M ++G+ P   T   +   +  +G   EA R+ K     R  M
Sbjct: 237 SLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEM-VGRDVM 295

Query: 449 PN 450
           P+
Sbjct: 296 PD 297


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 215/438 (49%), Gaps = 15/438 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L    +  E    F  ++  G+ P ++TY TL+  L  + R      L  +++K G 
Sbjct: 111 LNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGC 170

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDS------GCKPTTSTYNTLIKGYGNVGK 114
            PD + +  +I     +GN++ A+K+ Q+M +        CKP   TYN ++ G   VG+
Sbjct: 171 TPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGR 230

Query: 115 PEESLKLLQLMSQ---------DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
            +E+ +L + M           D+ ++P+  T+N+L+   C +  + EA  ++  M+ SG
Sbjct: 231 EDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESG 290

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           I PD VTYN+L   +   G+   A ++   M +    P+  +  ++++GY K   +E+AM
Sbjct: 291 IVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAM 350

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           +    M  +   PN++ ++SL+KG       D   K  ++M+  G+  +  T+   +D  
Sbjct: 351 KLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGL 410

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
                + +  ++F ++  +  + +I   + L  G  +AG+ + A  +   +   G  PNV
Sbjct: 411 CKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNV 470

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
           V +T +I G+C   ++ +A  + +KM   G  P++ TY TL+ G+ E+ +     +LL  
Sbjct: 471 VTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHR 530

Query: 406 MEEKGVRPKKSTIQLVAD 423
           M +K V P   T  +V D
Sbjct: 531 MAQKDVSPDAITCSIVVD 548



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 204/454 (44%), Gaps = 53/454 (11%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           H  H+ F+ ++     P+L ++  L++ L + K +  + SL +++   G+  D    N +
Sbjct: 52  HALHF-FHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNIL 110

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           +N       + E    F  +   G  P   TYNTLIKG     +  E+ +L   M Q   
Sbjct: 111 LNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRM-QKLG 169

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS------GIQPDAVTYNTLARAYAQYG 184
             P+  TY  L++  C   +I  A  +  +M+          +P+ +TYN +     + G
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVG 229

Query: 185 ETYRAEQMLFEMQNNQVRPNER----------TCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
               A+Q+  EM+   + PNE           T  +++   CKEG + +A + L  M E 
Sbjct: 230 REDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIES 289

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            + P+LV +NSLI+GF  + D +   +    M   G +PDV++++ +++ +S    + + 
Sbjct: 290 GIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEA 349

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN---------- 344
            +++++M+  G  P++  +  L KG   AG+   A+ + + M+ +G+  N          
Sbjct: 350 MKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDG 409

Query: 345 ----------VVMFT---------------TVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
                     + +FT                +I G C A K++ A  ++EK+   G  PN
Sbjct: 410 LCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPN 469

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           + TY  ++ G+    Q  +A  L+Q ME  G  P
Sbjct: 470 VVTYTIMIHGFCREGQVDKANVLIQKMEANGCTP 503



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 171/372 (45%), Gaps = 23/372 (6%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM----------KP 62
           + Y  NC      +P +ITY  +V  L +  R      L  +++  GM          +P
Sbjct: 205 SRYEINC------KPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQP 258

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D + FN +I+   + G V EA K+   M +SG  P   TYN+LI+G+  VG    + +L 
Sbjct: 259 DMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELF 318

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             M   K  +P+  +YN+L+  +     +EEA  +  +M+  G +P+ +TY++L +    
Sbjct: 319 VSMPS-KGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFL 377

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+   A+++   M+ + +  N  T GI + G CK   + +AM+    +K       +  
Sbjct: 378 AGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIEN 437

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            N LI G      +  ++ A  L E+    G +P+VVT++ ++  +   G + K   +  
Sbjct: 438 LNCLIDGLCK---AGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQ 494

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            M   G  PDI  ++ L +G+  + + ++   +L  M +  V P+ +  + V+       
Sbjct: 495 KMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDE 554

Query: 360 KMQRAMSIYEKM 371
           K Q  + +  + 
Sbjct: 555 KYQECLHLLPRF 566



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 145/286 (50%), Gaps = 1/286 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +GK  EA  +   +IE G  P L+TY +L+          S   L   +   G 
Sbjct: 267 IDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGC 326

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD I +N +IN  S++  V+EAMK++ +M   G +P   TY++L+KG    GK +++ K
Sbjct: 327 EPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKK 386

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L  +M +   +  N  TY I +   C  + + EA  +  ++ +S  + +    N L    
Sbjct: 387 LFSVM-KAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGL 445

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A ++  ++ N    PN  T  I++ G+C+EG ++ A   + +M+     P++
Sbjct: 446 CKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDI 505

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
           + +N+L++GF +    + V + L  M +  V PD +T S ++D  S
Sbjct: 506 ITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLS 551



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 113/223 (50%), Gaps = 1/223 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  ++N ++  G RP +ITY +L+  +    +      L S ++  G+  +S  + 
Sbjct: 345 KVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYG 404

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
             ++   ++  + EAMK+F ++K S  K      N LI G    GK E + +L + +S +
Sbjct: 405 IFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNE 464

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
            + +PN  TY I++  +C +  +++A  ++ KM A+G  PD +TYNTL R + +  +   
Sbjct: 465 GH-EPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEE 523

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
             Q+L  M    V P+  TC I+V    K+   ++ +  L R 
Sbjct: 524 VVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRF 566



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 56/119 (47%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK   A  +F  L  EGH P ++TYT ++    R+ +      LI K+E +G  PD
Sbjct: 445 LCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPD 504

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
            I +N ++    ES  ++E +++  +M      P   T + ++       K +E L LL
Sbjct: 505 IITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 563


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 237/478 (49%), Gaps = 42/478 (8%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV  G    A  I+  ++  G    + T   +V AL + ++F++++  +S +E  G+  D
Sbjct: 232 LVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFAD 291

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +INA    G V+EA ++       G +P   TYN ++ G   +GK + +  +L 
Sbjct: 292 IVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLI 351

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M Q   + PN  TYN L+   C +++I EA  +  +M   G+ PD V++++L    A+ 
Sbjct: 352 EMLQ-LGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARN 410

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR----------------- 226
           G  Y+A     EM+ + + P+     I++ G+C+ G + DA++                 
Sbjct: 411 GHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTY 470

Query: 227 ------------------FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
                                 M E  + P+   F +LI+G+   KD + +DKAL L E 
Sbjct: 471 NTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGY--CKDGN-MDKALNLFEA 527

Query: 269 F---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
                +KPD VT++T++D +  AG MG+ +E++DDM++  I PD   +  +  G+  +G 
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A ++   M + G+ PN+V   T+I G+C +  M +A     KM   GI P+  +Y T
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           L+ GY +     +A  L+  ME++G++    T  L+ + + A G  +EA++VL+   E
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIE 705



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 200/368 (54%), Gaps = 1/368 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  IF+ +   G  P L+++++L+  L R       L    ++E+ G+ PD++++  +I
Sbjct: 380 EAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILI 439

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +    +G + +A+K+  +M   GC     TYNT + G        ++  L   M + + +
Sbjct: 440 DGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVE-RGM 498

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  T+  L+R +C   ++++A N+   MV + ++PD VTYNTL   + + GE  RA++
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKE 558

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  +M    + P+  + G +++G+C  G + +A+    +M E  + PNLV  N+LIKG+ 
Sbjct: 559 LWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYC 618

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
              D     + L+ M   G+ PD  +++T++D +     + K   + ++M K G++ +I 
Sbjct: 619 RSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNII 678

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++++  G+   G+ Q+AE +L  M + G++P+   ++++I+G  +   M+ A   +++M
Sbjct: 679 TYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEM 738

Query: 372 CEIGINPN 379
            + G+ P+
Sbjct: 739 LQRGLVPD 746



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 147/317 (46%), Gaps = 1/317 (0%)

Query: 102 YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
           Y+ L++ Y    K  E  +  Q++ + K V  +    N L+        ++ AW +  ++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRR-KGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248

Query: 162 VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM 221
           V  GI+ +  T N +  A  +  +       L +M+   V  +  T   +++ YC+EG +
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308

Query: 222 EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
           E+A + L       + P L+ +N+++ G   I   D     L  M + G+ P+  T++T+
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +        + + QEIFD+M + G+ PD+  FS L     R G   +A      M + G+
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGI 428

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
            P+ V++T +I G+C    +  A+ + ++M   G   ++ TY T L G  + K    A+ 
Sbjct: 429 VPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADM 488

Query: 402 LLQVMEEKGVRPKKSTI 418
           L   M E+G+ P   T 
Sbjct: 489 LFNEMVERGMVPDFYTF 505



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 101/199 (50%), Gaps = 1/199 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+   A  +++ +I +   P  I+Y T++            L+L  ++ + G++P+ +  
Sbjct: 551 GEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTC 610

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I     SG++ +A +   KM  +G  P + +YNTLI GY      E++  L+  M +
Sbjct: 611 NTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + ++ N  TYN+++  +C++  ++EA  V+ KM+  GI PD  TY++L   +       
Sbjct: 671 -RGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMK 729

Query: 188 RAEQMLFEMQNNQVRPNER 206
            A +   EM    + P++R
Sbjct: 730 EAFRFHDEMLQRGLVPDDR 748



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/256 (19%), Positives = 115/256 (44%)

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
            + Y+ L R Y Q  +     +    ++   V  +   C  ++ G  + G ++ A     
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYG 246

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            +    +  N+   N ++      +  + V   L+ ME  GV  D+VT++T+++A+   G
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
           L+ +  ++ +     G+EP +  ++ +  G  + G+  +A+ +L  M + G+ PN   + 
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
           T++   C    +  A  I+++M   G+ P+L ++ +L+         ++A    + ME  
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS 426

Query: 410 GVRPKKSTIQLVADSW 425
           G+ P      ++ D +
Sbjct: 427 GIVPDNVIYTILIDGF 442



 Score = 46.6 bits (109), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 64/163 (39%)

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           + +  ++  +  A  + +  E F  + + G+   I+  + L  G VR G    A  I   
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           + + G+  NV     +++  C   K +  M     M   G+  ++ TY TL+  Y     
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
              A +LL     +G+ P   T   +      IG    AK VL
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVL 350


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 229/444 (51%), Gaps = 19/444 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK-DG 59
           MN L  +G+  EA  + + ++E+G +P  ITY T+V  + +     S L+L+ K+E+   
Sbjct: 185 MNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSH 244

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +KP+ ++++A+I+   + G   +A  ++ +M++ G  P   TYN +I G+ + G+  E+ 
Sbjct: 245 IKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQ 304

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +LLQ M + K + PN  TY+ L+ A+  +    EA  +  +M+  GI P+ +TYN++   
Sbjct: 305 RLLQEMLERK-INPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDG 363

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + +      AE M + M      P+  T   ++ GYC    ++D    L+ M E  +  +
Sbjct: 364 FCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVAD 423

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
              +N+LI GF  + D   ++ AL L ++    GV PD+VT +T++D     G +    E
Sbjct: 424 TTTYNTLIHGFCLVGD---LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 480

Query: 297 IFDDMVKA-----------GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
           +F  M K+           G+EPD+  ++IL  G +  G+  +AE +   M   G+ PN 
Sbjct: 481 MFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNT 540

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
           + ++++I+G C   ++  A  +++ M     +P++ T+ TL+ GY +A +     EL   
Sbjct: 541 ITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCE 600

Query: 406 MEEKGVRPKKSTIQLVADSWRAIG 429
           M  +G+     T   +   +R +G
Sbjct: 601 MGRRGIVADAITYITLIHGFRKVG 624



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 194/412 (47%), Gaps = 15/412 (3%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           F  + + G +P ++T++TL+  L  + R    L L  ++     +P+ + F  ++N    
Sbjct: 135 FGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCR 190

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
            G V EA+ +  +M + G +P   TY T++ G   +G    +L LL+ M +  ++KPN  
Sbjct: 191 EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVV 250

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
            Y+ ++          +A N+  +M   GI PD  TYN +   +   G    A+++L EM
Sbjct: 251 IYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEM 310

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
              ++ PN  T   +++ Y KE    +A      M    + PN + +NS+I GF      
Sbjct: 311 LERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRL 370

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           D  +    +M   G  PDV TF+T++D +  A  +    E+  +M + G+  D   ++ L
Sbjct: 371 DAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTL 430

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI-- 374
             G+   G+   A  +   M   GV P++V   T++ G C+  K++ A+ +++ M +   
Sbjct: 431 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 490

Query: 375 ---------GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
                    G+ P+++TY  L+ G     +   AEEL + M  +G+ P   T
Sbjct: 491 DLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTIT 542



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 210/448 (46%), Gaps = 6/448 (1%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F+ ++     P++I +  L+  + R +R   ++SL  K+E+  +  D   FN +I
Sbjct: 60  DAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILI 119

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                   +  A+  F K+   G +P   T++TL+ G     +  E+L L   M      
Sbjct: 120 KCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM-----C 174

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +PN  T+  L+   C +  + EA  ++ +MV  G+QP+ +TY T+     + G+T  A  
Sbjct: 175 RPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALN 234

Query: 192 MLFEMQN-NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           +L +M+  + ++PN      I+ G  K+G   DA      M+E  + P+L  +N +I GF
Sbjct: 235 LLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGF 294

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
                     + L  M E  + P+VVT+S +++A+       + +E++D+M+  GI P+ 
Sbjct: 295 CSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNT 354

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             ++ +  G+ +      AE +   M   G  P+V  F T+I G+C A ++     +  +
Sbjct: 355 ITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHE 414

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M E G+  +  TY TL+ G+        A +L Q M   GV P   T   + D     G 
Sbjct: 415 MTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 474

Query: 431 AREAKRVLKSAEEDRQSMPNKKDEIAVE 458
            ++A  + K+ ++ +  +   +    VE
Sbjct: 475 LKDALEMFKAMQKSKMDLDASRPFNGVE 502



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/412 (23%), Positives = 199/412 (48%), Gaps = 15/412 (3%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +AH ++  + E+G  P L TY  ++       R+     L+ ++ +  + P+ + +
Sbjct: 263 GRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTY 322

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +A+INA  +     EA +++ +M   G  P T TYN++I G+    + + +  +  +M+ 
Sbjct: 323 SALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMAT 382

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K   P+  T+N L+  +C    I++   ++++M  +G+  D  TYNTL   +   G+  
Sbjct: 383 -KGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLN 441

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-----------V 236
            A  +  +M ++ V P+  TC  ++ G C  G ++DA+     M++ +           V
Sbjct: 442 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGV 501

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P++  +N LI G ++       ++    M   G+ P+ +T+S++++       + +  +
Sbjct: 502 EPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQ 561

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +FD M      PD+  F+ L  GY +AG       +   M + G+  + + + T+I G+ 
Sbjct: 562 MFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFR 621

Query: 357 NAVKMQRAMSIYEKMCEIGINPN---LKTYETLLWGYGEAKQPWRAEELLQV 405
               +  A+ I+++M   G+ P+   +++  T+LW   E K+     E LQ+
Sbjct: 622 KVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQM 673



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 195/389 (50%), Gaps = 8/389 (2%)

Query: 43  KRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTY 102
           K  +  + L S + +    P  I FN ++         D  + ++QKM+         ++
Sbjct: 56  KGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSF 115

Query: 103 NTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV 162
           N LIK + +  K   +L     +++    +P+  T++ L+   C ++ + EA ++ ++M 
Sbjct: 116 NILIKCFCSCSKLPFALSTFGKITK-LGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMC 174

Query: 163 ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNME 222
               +P+ VT+ TL     + G    A  +L  M  + ++PN+ T G IV G CK G+  
Sbjct: 175 ----RPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTV 230

Query: 223 DAMRFLYRMKEL-EVHPNLVVFNSLIKGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFST 280
            A+  L +M+E+  + PN+V+++++I G   D + SD      T M+E G+ PD+ T++ 
Sbjct: 231 SALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDA-HNLYTEMQEKGIFPDLFTYNC 289

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++D + S+G   + Q +  +M++  I P++  +S L   YV+  +  +AE +   M   G
Sbjct: 290 MIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRG 349

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
           + PN + + ++I G+C   ++  A  ++  M   G +P++ T+ TL+ GY  AK+     
Sbjct: 350 IIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGT 409

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           ELL  M E G+    +T   +   +  +G
Sbjct: 410 ELLHEMTETGLVADTTTYNTLIHGFCLVG 438



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 152/323 (47%), Gaps = 18/323 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N  V + K  EA  +++ ++  G  P  ITY +++    +Q R  +   +   +   G 
Sbjct: 326 INAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGC 385

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   FN +I+    +  +D+  ++  +M ++G    T+TYNTLI G+  VG    +L 
Sbjct: 386 SPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALD 445

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS-----------GIQPD 169
           L Q M     V P+  T N L+   C    +++A  +   M  S           G++PD
Sbjct: 446 LSQQMIS-SGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPD 504

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
             TYN L       G+   AE++  EM +  + PN  T   +++G CK+  +++A +   
Sbjct: 505 VQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFD 564

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWS 286
            M      P++V FN+L+ G+     +  VD  L L  E    G+  D +T+ T++  + 
Sbjct: 565 SMGSKSFSPDVVTFNTLVSGYC---KAGRVDDGLELFCEMGRRGIVADAITYITLIHGFR 621

Query: 287 SAGLMGKCQEIFDDMVKAGIEPD 309
             G +    +IF +M+ +G+ PD
Sbjct: 622 KVGNINGALDIFQEMISSGVYPD 644



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 103/232 (44%), Gaps = 5/232 (2%)

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           SG+ +   +EDA+     M      P+++ FN L+   + ++  D V      ME   + 
Sbjct: 50  SGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIP 109

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            DV +F+ ++  + S   +      F  + K G +PD+  FS L  G        +A  +
Sbjct: 110 CDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDL 169

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              M      PNVV FTT+++G C   ++  A+++ ++M E G+ PN  TY T++ G  +
Sbjct: 170 FHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCK 225

Query: 393 AKQPWRAEELLQVMEEKG-VRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
                 A  LL+ MEE   ++P       + D     G   +A  +    +E
Sbjct: 226 IGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQE 277



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 57/106 (53%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  + +  EA  +F+ +  +   P ++T+ TLV+   +  R    L L  ++ + G+
Sbjct: 547 INGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGI 606

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLI 106
             D+I +  +I+   + GN++ A+ IFQ+M  SG  P T T  +++
Sbjct: 607 VADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSML 652


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 237/478 (49%), Gaps = 42/478 (8%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV  G    A  I+  ++  G    + T   +V AL + ++F++++  +S +E  G+  D
Sbjct: 232 LVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFAD 291

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +INA    G V+EA ++       G +P   TYN ++ G   +GK + +  +L 
Sbjct: 292 IVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLI 351

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M Q   + PN  TYN L+   C +++I EA  +  +M   G+ PD V++++L    A+ 
Sbjct: 352 EMLQ-LGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARN 410

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR----------------- 226
           G  Y+A     EM+ + + P+     I++ G+C+ G + DA++                 
Sbjct: 411 GHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTY 470

Query: 227 ------------------FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
                                 M E  + P+   F +LI+G+   KD + +DKAL L E 
Sbjct: 471 NTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGY--CKDGN-MDKALNLFEA 527

Query: 269 F---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
                +KPD VT++T++D +  AG MG+ +E++DDM++  I PD   +  +  G+  +G 
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A ++   M + G+ PN+V   T+I G+C +  M +A     KM   GI P+  +Y T
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           L+ GY +     +A  L+  ME++G++    T  L+ + + A G  +EA++VL+   E
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIE 705



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 200/368 (54%), Gaps = 1/368 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  IF+ +   G  P L+++++L+  L R       L    ++E+ G+ PD++++  +I
Sbjct: 380 EAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILI 439

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +    +G + +A+K+  +M   GC     TYNT + G        ++  L   M + + +
Sbjct: 440 DGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVE-RGM 498

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  T+  L+R +C   ++++A N+   MV + ++PD VTYNTL   + + GE  RA++
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKE 558

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  +M    + P+  + G +++G+C  G + +A+    +M E  + PNLV  N+LIKG+ 
Sbjct: 559 LWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYC 618

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
              D     + L+ M   G+ PD  +++T++D +     + K   + ++M K G++ +I 
Sbjct: 619 RSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNII 678

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++++  G+   G+ Q+AE +L  M + G++P+   ++++I+G  +   M+ A   +++M
Sbjct: 679 TYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEM 738

Query: 372 CEIGINPN 379
            + G+ P+
Sbjct: 739 LQRGLVPD 746



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 202/409 (49%), Gaps = 7/409 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK   A  +   +++ G  P   TY TL+  + R+        +  ++ + G+ PD + F
Sbjct: 341 GKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSF 400

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +++I   + +G++ +A+  F++M+ SG  P    Y  LI G+   G   ++LK+   M  
Sbjct: 401 SSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLA 460

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            +    +  TYN  +   C K    +A  +  +MV  G+ PD  T+ TL R Y + G   
Sbjct: 461 -RGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMD 519

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A  +   M    ++P++ T   ++ G+CK G M  A      M   ++ P+ + + +++
Sbjct: 520 KALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVL 579

Query: 248 KGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            GF     S  + +AL L   M E G++P++VT +T++  +  +G M K  E    M+  
Sbjct: 580 NGFCS---SGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISN 636

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           GI PD   ++ L  GY++    +KA  ++  M K G+  N++ +  +++G+C   KMQ A
Sbjct: 637 GIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEA 696

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             +  KM EIGINP+  TY +L+ G+        A      M ++G+ P
Sbjct: 697 EQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 147/317 (46%), Gaps = 1/317 (0%)

Query: 102 YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
           Y+ L++ Y    K  E  +  Q++ + K V  +    N L+        ++ AW +  ++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRR-KGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248

Query: 162 VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM 221
           V  GI+ +  T N +  A  +  +       L +M+   V  +  T   +++ YC+EG +
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308

Query: 222 EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
           E+A + L       + P L+ +N+++ G   I   D     L  M + G+ P+  T++T+
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +        + + QEIFD+M + G+ PD+  FS L     R G   +A      M + G+
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGI 428

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
            P+ V++T +I G+C    +  A+ + ++M   G   ++ TY T L G  + K    A+ 
Sbjct: 429 VPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADM 488

Query: 402 LLQVMEEKGVRPKKSTI 418
           L   M E+G+ P   T 
Sbjct: 489 LFNEMVERGMVPDFYTF 505



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 101/199 (50%), Gaps = 1/199 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+   A  +++ +I +   P  I+Y T++            L+L  ++ + G++P+ +  
Sbjct: 551 GEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTC 610

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I     SG++ +A +   KM  +G  P + +YNTLI GY      E++  L+  M +
Sbjct: 611 NTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + ++ N  TYN+++  +C++  ++EA  V+ KM+  GI PD  TY++L   +       
Sbjct: 671 -RGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMK 729

Query: 188 RAEQMLFEMQNNQVRPNER 206
            A +   EM    + P++R
Sbjct: 730 EAFRFHDEMLQRGLVPDDR 748



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/343 (19%), Positives = 144/343 (41%), Gaps = 18/343 (5%)

Query: 113 GKPEESLKLLQLMSQD-KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV-ASGIQPDA 170
           G     LK + L+S    N K +  + + +V        + EA   + +MV  SG+    
Sbjct: 112 GDLHLGLKFIGLVSYHFPNFKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVK 171

Query: 171 VT----------------YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
           V                 Y+ L R Y Q  +     +    ++   V  +   C  ++ G
Sbjct: 172 VVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGG 231

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
             + G ++ A      +    +  N+   N ++      +  + V   L+ ME  GV  D
Sbjct: 232 LVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFAD 291

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           +VT++T+++A+   GL+ +  ++ +     G+EP +  ++ +  G  + G+  +A+ +L 
Sbjct: 292 IVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLI 351

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            M + G+ PN   + T++   C    +  A  I+++M   G+ P+L ++ +L+       
Sbjct: 352 EMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNG 411

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
             ++A    + ME  G+ P      ++ D +   G   +A ++
Sbjct: 412 HLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKM 454



 Score = 46.6 bits (109), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 64/163 (39%)

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           + +  ++  +  A  + +  E F  + + G+   I+  + L  G VR G    A  I   
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           + + G+  NV     +++  C   K +  M     M   G+  ++ TY TL+  Y     
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
              A +LL     +G+ P   T   +      IG    AK VL
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVL 350


>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
 gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
 gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
 gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 222/441 (50%), Gaps = 38/441 (8%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           +TY  LVAA  R    K    +I  + K G+ P++I +  +I+A  ++G  DEA+K+F  
Sbjct: 352 VTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYS 411

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           MK++GC P T TYN ++   G   +  E +K+L  M +     PN  T+N ++ A C   
Sbjct: 412 MKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM-KSNGCSPNRATWNTML-ALCGNK 469

Query: 150 SIEEAWNVVYK-MVASGIQPDAVTYNTLARAYAQ----------YGETYRA--------- 189
            +++  N V++ M + G +PD  T+NTL  AY +          YGE  RA         
Sbjct: 470 GMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTY 529

Query: 190 ----------------EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
                           E ++ +M++   +P E +  +++  Y K GN     R   R+KE
Sbjct: 530 NALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKE 589

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
            ++ P+ ++  +L+      +   G ++A TL ++ G KPD+V F++++  ++   +  +
Sbjct: 590 GQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQ 649

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
            + I + + + G+ PD+  ++ L   YVR GE  KAE IL ++ K  + P++V + TVI 
Sbjct: 650 AEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIK 709

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G+C    MQ A+ +  +M E GI P + TY T + GY         E++++ M +   RP
Sbjct: 710 GFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRP 769

Query: 414 KKSTIQLVADSWRAIGLAREA 434
            + T ++V D +   G   EA
Sbjct: 770 NELTFKMVVDGYCRAGKYSEA 790



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 107/439 (24%), Positives = 208/439 (47%), Gaps = 4/439 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDGMKPDSIL 66
           GK  +A  +F  + E G  PTL+TY  ++    +  R ++ IL ++ ++   G+K D   
Sbjct: 224 GKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFT 283

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            + +++AC+  G + EA + F ++K  G +P T TYN L++ +G  G   E+L +L+ M 
Sbjct: 284 CSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEM- 342

Query: 127 QDKNVKPNDR-TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
            ++N  P D  TYN LV A+      +EA  V+  M   G+ P+A+TY T+  AY + G+
Sbjct: 343 -EENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGK 401

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A ++ + M+     PN  T   ++S   K+    + ++ L  MK     PN   +N+
Sbjct: 402 EDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNT 461

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           ++    +      V++    M+  G +PD  TF+T++ A+   G      +++ +M +AG
Sbjct: 462 MLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAG 521

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
               +  ++ L     R G+ +  E++++ M+  G  P    ++ ++  +          
Sbjct: 522 FNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIE 581

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            I  ++ E  I P+     TLL    + +    +E    + ++ G +P       +   +
Sbjct: 582 RIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIF 641

Query: 426 RAIGLAREAKRVLKSAEED 444
               +  +A+ +L+S  ED
Sbjct: 642 TRNNMYDQAEGILESIRED 660



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 95/399 (23%), Positives = 178/399 (44%), Gaps = 36/399 (9%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA  +F  + E G  P   TY  +++ L ++ R   ++ ++  ++ +G  P+   +
Sbjct: 400 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATW 459

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N M+  C   G      ++F++MK  G +P   T+NTLI  YG  G   ++ K+   M++
Sbjct: 460 NTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTR 519

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                    TYN L+ A   K       NV+  M + G +P   +Y+ + + YA+ G   
Sbjct: 520 -AGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYL 578

Query: 188 RAEQMLFEMQNNQVRPN--------------------ERTCGI---------------IV 212
             E++   ++  Q+ P+                    ER   +               ++
Sbjct: 579 GIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSML 638

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           S + +    + A   L  ++E  + P+LV +NSL+  ++   +    ++ L  +E+  +K
Sbjct: 639 SIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLK 698

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           PD+V+++T++  +   GLM +   +  +M + GI P I  ++    GY   G   + E +
Sbjct: 699 PDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDV 758

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
           +  M K    PN + F  V+ G+C A K   AM    K+
Sbjct: 759 IECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 94/409 (22%), Positives = 183/409 (44%), Gaps = 8/409 (1%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
            V  L R+ ++     L+ K+       D   +  +++A S +G  ++A+ +F++MK+ G
Sbjct: 181 FVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMG 240

Query: 95  CKPTTSTYNTLIKGYGNVGKP-EESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
             PT  TYN ++  +G +G+   + L +L  M + K +K ++ T + ++ A   +  + E
Sbjct: 241 PSPTLVTYNVILDVFGKMGRSWRKILGVLDEM-RSKGLKFDEFTCSTVLSACAREGLLRE 299

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A     ++ + G +P  VTYN L + + + G    A  +L EM+ N    +  T   +V+
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
            Y + G  ++A   +  M +  V PN + + ++I  +      D   K    M+E G  P
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP 419

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           +  T++ ++          +  ++  DM   G  P+   ++ +       G  +    + 
Sbjct: 420 NTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVF 479

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M+  G  P+   F T+IS +        A  +Y +M   G N  + TY  LL      
Sbjct: 480 REMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR- 538

Query: 394 KQPWRA-EELLQVMEEKGVRPKKST----IQLVADSWRAIGLAREAKRV 437
           K  WR+ E ++  M+ KG +P +++    +Q  A     +G+ R   R+
Sbjct: 539 KGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRI 587



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 113/219 (51%), Gaps = 8/219 (3%)

Query: 21  IEEGH-RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           I+EG   P+ +   TL+ A  + +         +  +K G KPD ++FN+M++  + +  
Sbjct: 587 IKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNM 646

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQDKNVKPNDR 136
            D+A  I + +++ G  P   TYN+L+  Y   G   K EE LK L+       +KP+  
Sbjct: 647 YDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE----KSQLKPDLV 702

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           +YN +++ +C +  ++EA  ++ +M   GI+P   TYNT    Y   G     E ++  M
Sbjct: 703 SYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECM 762

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
             N  RPNE T  ++V GYC+ G   +AM F+ ++K  +
Sbjct: 763 AKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFD 801



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 5/138 (3%)

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
             ++ D  V  I  +   R  +   A  +L  +       +V  +TT++  +    K ++
Sbjct: 169 GALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEK 228

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE---KGVRPKKSTIQL 420
           A+ ++E+M E+G +P L TY  +L  +G+  + WR  ++L V++E   KG++  + T   
Sbjct: 229 AIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWR--KILGVLDEMRSKGLKFDEFTCST 286

Query: 421 VADSWRAIGLAREAKRVL 438
           V  +    GL REAK   
Sbjct: 287 VLSACAREGLLREAKEFF 304



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 41/85 (48%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   EA  + + + E G RP + TY T V+  T    F  I  +I  + K+  +P+ + 
Sbjct: 714 RGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELT 773

Query: 67  FNAMINACSESGNVDEAMKIFQKMK 91
           F  +++    +G   EAM    K+K
Sbjct: 774 FKMVVDGYCRAGKYSEAMDFVSKIK 798


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 215/416 (51%), Gaps = 3/416 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  +G   EA  I + L   G +P  +TYT ++ +L   +R+K +  L++++  +  
Sbjct: 328 INAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNC 387

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + FN ++ +  + G VD A+++   M + GC     TY++++ G  +VG+ +++++
Sbjct: 388 APDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVE 447

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  + +    KP+   Y  +++  CS    E A  ++ +M+ S   PD VT+NT+  + 
Sbjct: 448 LLSRL-KSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASL 506

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G   RA +++ +M  N   P+  T   I+ G C E  ++DAM  L  ++     P++
Sbjct: 507 CQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDI 566

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V FN+L+KG   +   +  ++ +  M      PD +TF+T++ +    GL+ +  E    
Sbjct: 567 VTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKI 626

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M + G  P+   +SI+    ++AG+ Q A  +L+ M      P+++ + TVIS    A K
Sbjct: 627 MAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGK 684

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
           M+ A+ +   M   G+ P+  TY +L +G        RA  +L+ +++ G+ P  +
Sbjct: 685 MEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTT 740



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 215/447 (48%), Gaps = 8/447 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  +A  +F  L   G   T++TY T+V    R  R +    LI+ +      PD
Sbjct: 197 LCSDGRVSDAERVFAAL---GPSATVVTYNTMVNGYCRAGRIEDARRLINGMP---FPPD 250

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +  FN +I A    G + +A+ +F  M   GC P+  TY+ L+          +++ LL 
Sbjct: 251 TFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLD 310

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + K  +P+  TYN+L+ A C++  ++EA N++  + + G +PDAVTY  + ++    
Sbjct: 311 EM-RAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGS 369

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                 E++L EM +N   P+E T   IV+  C++G ++ A+  +  M E     ++V +
Sbjct: 370 ERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTY 429

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           +S++ G  D+   D   + L+ ++ +G KPD + ++T++    S     + +E+  +M+ 
Sbjct: 430 SSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLC 489

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           +   PD   F+ +     + G   +A  ++  M + G  P++V +  +I G CN   +  
Sbjct: 490 SDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDD 549

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           AM +   +   G  P++ T+ TLL G     +   AE+L+  M      P + T   V  
Sbjct: 550 AMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVIT 609

Query: 424 SWRAIGLAREAKRVLKSAEEDRQSMPN 450
           S    GL  +A   LK   E+   +PN
Sbjct: 610 SLCQKGLLTQAIETLKIMAEN-GCVPN 635



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 195/403 (48%), Gaps = 1/403 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  +A  +F+ ++  G  P+++TY+ L+ A  ++  ++  ++L+ ++   G +PD
Sbjct: 261 LCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPD 320

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +INA    G+VDEA+ I   +   GCKP   TY  ++K      + +E  +LL 
Sbjct: 321 IVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLA 380

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M+ + N  P++ T+N +V + C +  ++ A  VV  M   G   D VTY+++       
Sbjct: 381 EMTSN-NCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDV 439

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A ++L  +++   +P+      ++ G C     E A   +  M   +  P+ V F
Sbjct: 440 GRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTF 499

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+++         D   + +  M E G  PD+VT++ I+D   +   +    E+  D+  
Sbjct: 500 NTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQS 559

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G +PDI  F+ L KG       + AE ++ +M +    P+ + F TVI+  C    + +
Sbjct: 560 CGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQ 619

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
           A+   + M E G  PN  TY  ++    +A +   A ELL  M
Sbjct: 620 AIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM 662



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/412 (23%), Positives = 194/412 (47%), Gaps = 3/412 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G    A  + + + E G    ++TY++++  L    R    + L+S+++  G KPD
Sbjct: 401 LCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPD 460

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +I +  ++     +   + A ++  +M  S C P   T+NT++      G  + ++++++
Sbjct: 461 TIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVE 520

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            MS++    P+  TYN ++   C+++ I++A  ++  + + G +PD VT+NTL +     
Sbjct: 521 QMSEN-GCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGV 579

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                AEQ++  M  +   P+E T   +++  C++G +  A+  L  M E    PN   +
Sbjct: 580 DRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTY 639

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           + ++   L    +    + L+ M      PD++T++T++   + AG M +  ++   MV 
Sbjct: 640 SIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVS 697

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ PD   +  LA G  R     +A  +L  ++  G+ P+   +  V+ G+C   +   
Sbjct: 698 NGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDL 757

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           A+  +  M   G  P+  TY  LL           A+ LL  +   GV  KK
Sbjct: 758 AIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGVLDKK 809



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 8/268 (2%)

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVR--PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
           R+  Q GE   A  +   M +   R  P    C I++   C +G + DA R       L 
Sbjct: 158 RSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVF---AALG 214

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
               +V +N+++ G+     +  ++ A  L+      PD  TF+ ++ A    G +    
Sbjct: 215 PSATVVTYNTMVNGYC---RAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDAL 271

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
            +FDDM+  G  P +  +SIL     +    ++A ++L  MR  G  P++V +  +I+  
Sbjct: 272 AVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAM 331

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           CN   +  A++I   +   G  P+  TY  +L     +++    EELL  M      P +
Sbjct: 332 CNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDE 391

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEE 443
            T   +  S    GL   A  V+    E
Sbjct: 392 VTFNTIVTSLCQQGLVDRAIEVVDHMSE 419


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 206/403 (51%), Gaps = 1/403 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           R +L T+  ++  L ++ + K     I  +E  G+KP+ + +N +I+     G    A  
Sbjct: 213 RSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARV 272

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           IFQ MKD G +P   TYN+ I G    G+ EE+  L+  M +   V PN  TYN L+  +
Sbjct: 273 IFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLV-PNAVTYNALIDGY 331

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C+K  +++A+    +M++ GI    VTYN    A    G    A+ M+ EM+   + P+ 
Sbjct: 332 CNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDA 391

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T  I+++GYC+ G+ + A   L  M    + P LV + SLI            D   + 
Sbjct: 392 VTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSK 451

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           +++ G+ PD++ F+ ++D   + G + +  ++  +M    + PD   ++ L +GY R G+
Sbjct: 452 IQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGK 511

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            ++A  +L  M++ G+ P+ + + T+ISG+     M+ A  + ++M   G +P + TY  
Sbjct: 512 VEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNA 571

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           L+ G  + ++   AEELL+ M  KG+ P  ST   + ++   +
Sbjct: 572 LIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETV 614



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 196/387 (50%), Gaps = 1/387 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+L  +GK  +A      +   G +P ++TY T++     + +F+    +   ++  G+
Sbjct: 223 INVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGL 282

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD   +N+ I+   + G ++EA  +  KM + G  P   TYN LI GY N G  +++  
Sbjct: 283 EPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYA 342

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M   K +  +  TYN+ + A   +  + +A N++ +M   G+ PDAVT+N L   Y
Sbjct: 343 YRDEMIS-KGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGY 401

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+  RA  +L EM    ++P   T   ++    K   M++A     ++++  + P++
Sbjct: 402 CRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDI 461

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +VFN+LI G     + D   + L  M+   V PD +T++T+M  +   G + + +++ D+
Sbjct: 462 IVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDE 521

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M + GI+PD   ++ L  GY + G+ + A  +   M   G  P ++ +  +I G C   +
Sbjct: 522 MKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQE 581

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLL 387
            + A  + ++M   GI P+  TY +++
Sbjct: 582 GEHAEELLKEMVSKGITPDDSTYLSII 608



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 193/378 (51%), Gaps = 7/378 (1%)

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +++F+ ++ A  E    +EA++ F  +K+ G  P   T N ++  +  + + + +  L  
Sbjct: 146 TLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +  N++ +  T+NI++   C +  +++A   +  M   G++P+ VTYNT+   +   
Sbjct: 206 EMFR-MNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLR 264

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+  RA  +   M++  + P+  T    +SG CKEG +E+A   + +M E  + PN V +
Sbjct: 265 GKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTY 324

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N+LI G+ +  D   +DKA    +E    G+   +VT++  + A    G MG    +  +
Sbjct: 325 NALIDGYCNKGD---LDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKE 381

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M + G+ PD    +IL  GY R G+ ++A  +L  M   G+ P +V +T++I       +
Sbjct: 382 MREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNR 441

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ A +++ K+ + G+ P++  +  L+ G+       RA +LL+ M+   V P + T   
Sbjct: 442 MKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNT 501

Query: 421 VADSWRAIGLAREAKRVL 438
           +   +   G   EA+++L
Sbjct: 502 LMQGYCREGKVEEARQLL 519



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/411 (23%), Positives = 193/411 (46%), Gaps = 3/411 (0%)

Query: 28  TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIF 87
           T + +  LV A    K+    L     +++ G  P+    N M++   +      A  ++
Sbjct: 145 TTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLY 204

Query: 88  QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
            +M     + +  T+N +I      GK +++ + +  M +   VKPN  TYN ++   C 
Sbjct: 205 AEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHM-ETLGVKPNVVTYNTIIHGHCL 263

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
           +   + A  +   M   G++PD  TYN+      + G    A  ++ +M    + PN  T
Sbjct: 264 RGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVT 323

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG-FLDIKDSDGVDKALTLM 266
              ++ GYC +G+++ A  +   M    +  +LV +N  I   F++ +  D  D  +  M
Sbjct: 324 YNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDA-DNMIKEM 382

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            E G+ PD VT + +++ +   G   +   + D+MV  GI+P +  ++ L     +    
Sbjct: 383 REKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRM 442

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           ++A+++ + +++ G+ P++++F  +I G C    + RA  + ++M  + + P+  TY TL
Sbjct: 443 KEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTL 502

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           + GY    +   A +LL  M+ +G++P   +   +   +   G  ++A RV
Sbjct: 503 MQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRV 553



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 173/363 (47%), Gaps = 5/363 (1%)

Query: 98  TTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
           TT  ++ L++ Y  + KP E+L+   L+ ++K   PN  T N ++  +   N  + AW +
Sbjct: 145 TTLIFDLLVRAYCELKKPNEALECFYLI-KEKGFVPNIETCNQMLSLFLKLNRTQMAWVL 203

Query: 158 VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
             +M    I+    T+N +     + G+  +A++ +  M+   V+PN  T   I+ G+C 
Sbjct: 204 YAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCL 263

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
            G  + A      MK+  + P+   +NS I G       +     +  M E G+ P+ VT
Sbjct: 264 RGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVT 323

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           ++ ++D + + G + K     D+M+  GI   +  +++        G    A++++  MR
Sbjct: 324 YNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMR 383

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
           + G+ P+ V    +I+G+C     +RA  + ++M   GI P L TY +L++  G+  +  
Sbjct: 384 EKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMK 443

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAV 457
            A+ L   ++++G+ P       + D   A G    A ++LK   ++ + +P   DEI  
Sbjct: 444 EADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEM-DNMKVLP---DEITY 499

Query: 458 ESI 460
            ++
Sbjct: 500 NTL 502



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 147/282 (52%), Gaps = 1/282 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG   +A+   + +I +G   +L+TY   + AL  + R     ++I ++ + GM PD++ 
Sbjct: 334 KGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVT 393

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            N +IN     G+   A  +  +M   G +PT  TY +LI   G   + +E+  L   + 
Sbjct: 394 HNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQ 453

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           Q+  + P+   +N L+   C+  +I+ A+ ++ +M    + PD +TYNTL + Y + G+ 
Sbjct: 454 QE-GLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKV 512

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A Q+L EM+   ++P+  +   ++SGY K G+M+DA R    M      P ++ +N+L
Sbjct: 513 EEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNAL 572

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
           I+G    ++ +  ++ L  M   G+ PD  T+ +I++A  + 
Sbjct: 573 IQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETV 614



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 126/260 (48%), Gaps = 1/260 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G+  +A  +   + E+G  P  +T+  L+    R    K    L+ ++   G+
Sbjct: 363 IHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGI 422

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P  + + ++I    +   + EA  +F K++  G  P    +N LI G+   G  + + +
Sbjct: 423 QPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQ 482

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M   K V P++ TYN L++ +C +  +EEA  ++ +M   GI+PD ++YNTL   Y
Sbjct: 483 LLKEMDNMK-VLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGY 541

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++ G+   A ++  EM      P   T   ++ G CK    E A   L  M    + P+ 
Sbjct: 542 SKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDD 601

Query: 241 VVFNSLIKGFLDIKDSDGVD 260
             + S+I+    + D +G D
Sbjct: 602 STYLSIIEAMETVDDLEGND 621


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 226/428 (52%), Gaps = 18/428 (4%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +FN L+++   P  I +  ++ +L + K + ++L L  K+E  G+KP+ +  N +I
Sbjct: 45  DAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILI 104

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG----------YGNVGKPEESLKL 121
           N+  + G++  A  +  K+   G KP T T NTLIKG          +  VGK ++++ L
Sbjct: 105 NSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDL 164

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
              M  + N+ P+  T+ ILV  +C +  ++EA NV+  M+  GI+P  VTYN+L   Y 
Sbjct: 165 FNKMILE-NINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYF 223

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
              +  +A+ +   M    V P+ ++  I+++G+CK   M++AM  L  M   ++ PN+V
Sbjct: 224 LVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVV 283

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
            ++SLI G      S  +  AL L++E    G  P++VT+S+I+DA      +     + 
Sbjct: 284 TYSSLIDGLCK---SGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALL 340

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
             M   GI+P+++ ++IL KG  ++G+ + A  +   +   G + NV  +T +I G+C+ 
Sbjct: 341 TQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDK 400

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS-T 417
                A+++  KM + G  PN KTYE ++    +  +   AE+LL  M E     + + T
Sbjct: 401 GLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALT 460

Query: 418 IQLVADSW 425
             L+A  W
Sbjct: 461 NDLIASIW 468



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 192/398 (48%), Gaps = 13/398 (3%)

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
           + +VD+A+ +F ++      P    +N ++            L L Q M + + +KPN  
Sbjct: 40  NNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKM-EFRGIKPNLV 98

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR-------- 188
             NIL+ ++C    I  A++V+ K++  G +P+ +T NTL +     G+ +         
Sbjct: 99  NCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKL 158

Query: 189 --AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A  +  +M    + P+  T  I+V G+CKEG +++A   L  M    + P +V +NSL
Sbjct: 159 KDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSL 218

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + G+  +K  +        M + GV PD+ ++S +++ +    +M +  E+  +M    I
Sbjct: 219 MDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQI 278

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P++  +S L  G  ++G+   A  ++  M   G  PN+V +++++   C   ++  A++
Sbjct: 279 IPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIA 338

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           +  +M   GI PN+ TY  L+ G  ++ +   A ++ + +  KG      T  ++   + 
Sbjct: 339 LLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFC 398

Query: 427 AIGLAREAKRVLKSAEEDRQSMPNKKD-EIAVESIHRK 463
             GL  EA  +L S  ED   +PN K  EI + S+ +K
Sbjct: 399 DKGLFDEALTLL-SKMEDNGCIPNAKTYEIIILSLFKK 435



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 161/352 (45%), Gaps = 21/352 (5%)

Query: 2   NILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR----------FKS 47
           NIL+      G    A  +   +++ G++P  IT  TL+  L    +           K 
Sbjct: 101 NILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKD 160

Query: 48  ILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIK 107
            + L +K+  + + PD   F  +++   + G V EA  +   M   G KP   TYN+L+ 
Sbjct: 161 AVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMD 220

Query: 108 GYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ 167
           GY  V +  ++  +   M+Q   V P+ ++Y+IL+  +C    ++EA  ++ +M    I 
Sbjct: 221 GYFLVKQVNKAKSIFNTMAQ-LGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQII 279

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
           P+ VTY++L     + G+   A +++ EM +    PN  T   I+   CK   +++A+  
Sbjct: 280 PNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIAL 339

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP---DVVTFSTIMDA 284
           L +MK   + PN+  +  LIKG      S  ++ A  + E+  VK    +V T++ ++  
Sbjct: 340 LTQMKNQGIQPNMYTYTILIKGLC---QSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQG 396

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           +   GL  +   +   M   G  P+   + I+     +  E + AE +L  M
Sbjct: 397 FCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEM 448



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/338 (22%), Positives = 155/338 (45%), Gaps = 45/338 (13%)

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           + N +++A ++  +++     P  + +N +  +  +    +    +  +M+   ++PN  
Sbjct: 39  NNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLV 98

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL-------------DI 253
            C I+++ +C+ G++  A   L ++ ++   PN +  N+LIKG                +
Sbjct: 99  NCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKL 158

Query: 254 KDS-----------------------DGVDK---------ALTLMEEFGVKPDVVTFSTI 281
           KD+                       DG  K          L +M   G+KP VVT++++
Sbjct: 159 KDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSL 218

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           MD +     + K + IF+ M + G+ PDI  +SIL  G+ +     +A  +L  M    +
Sbjct: 219 MDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQI 278

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
            PNVV ++++I G C + K+  A+ + ++M + G  PN+ TY ++L    +  Q   A  
Sbjct: 279 IPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIA 338

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           LL  M+ +G++P   T  ++       G   +A++V +
Sbjct: 339 LLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFE 376


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 223/408 (54%), Gaps = 7/408 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG+ H+A +  + +I  G     ++Y TL+  L +    K+ L L+ + +   ++PD ++
Sbjct: 276 KGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVM 335

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I+   +  +V++A  ++ +       P   TYN LI G+  VGK ++++ L   M+
Sbjct: 336 YNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMT 395

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             KN+ P+  T++ILV  +C   +I+EA NV+  M+   I+PD VTY++L   Y    E 
Sbjct: 396 S-KNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEV 454

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +AE +   M +  V  N ++  I+++G+CK   +++AM+    M   ++ P+++ ++SL
Sbjct: 455 NKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSL 514

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           I G   +  S  +  AL L++E    G +PD++T+++I+DA      + K   +   +  
Sbjct: 515 IDG---LCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKG 571

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GI PD++ ++IL KG  ++G+ + A  +   +   G + +V  +T +I G+C+      
Sbjct: 572 QGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDE 631

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           A+++  KM E G  P+ KTYE ++    E  +   AE+LL+ M  +G+
Sbjct: 632 ALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 193/403 (47%), Gaps = 36/403 (8%)

Query: 54  KVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVG 113
           K+ K+G +PD+I     I      G + +A+    K+   G      +Y TLI G   VG
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312

Query: 114 KPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY 173
           + + +L+LL+  +  K V+P+   YN ++   C    + +A+++  + V+  I PD  TY
Sbjct: 313 ETKAALELLR-RNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTY 371

Query: 174 NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
           N L   +   G+   A  +  +M +  + P+  T  I+V G+CK+GN+++A   L  M +
Sbjct: 372 NALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMK 431

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDG--------------------------------VDK 261
             + P++V ++SL+ G+  + + +                                 VD+
Sbjct: 432 QSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDE 491

Query: 262 ALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
           A+ L +E   K   PDV+T+S+++D    +G +    E+ D+M   G +PDI  ++ +  
Sbjct: 492 AMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILD 551

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
              +     KA ++LT ++  G+ P++  +T ++ G C + K++ A  ++E +   G N 
Sbjct: 552 ALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNL 611

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           ++  Y  ++ G+ +      A  LL  MEE G  P   T +++
Sbjct: 612 DVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEII 654



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 112/462 (24%), Positives = 204/462 (44%), Gaps = 49/462 (10%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           ++A  +F  L+ +   P  I +  ++ +L + K + ++LSL  K+E  G+K + +  N +
Sbjct: 92  NDAVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNIL 151

Query: 71  INACSESGNVDEAMKIFQK-------------------------------------MKD- 92
           IN+  + G +  A  +  +                                     +KD 
Sbjct: 152 INSFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKDF 211

Query: 93  --SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ-------DKNVKPNDRTYNILVR 143
             S       ++  LI+ +    K +  LK  ++  +           +P+  T    ++
Sbjct: 212 LQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIK 271

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +C K  I +A +   K++A G   D V+Y TL     + GET  A ++L       V+P
Sbjct: 272 GFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQP 331

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI-KDSDGVDKA 262
           +      I+ G CK+ ++ DA           + P++  +N+LI GF  + K  D +D  
Sbjct: 332 DVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAID-L 390

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              M    + PDV TFS ++D +   G + + + +   M+K  I+PD+  +S L  GY  
Sbjct: 391 FNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCL 450

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
             E  KAESI  +M   GV  NV  +  +I+G+C    +  AM ++++M    I P++ T
Sbjct: 451 VNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVIT 510

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           Y +L+ G  ++ +   A EL+  M  +G +P   T   + D+
Sbjct: 511 YSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDA 552



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 153/337 (45%), Gaps = 11/337 (3%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P + TY  L++      + K  + L +K+    + PD   F+ +++   + GN+ EA  +
Sbjct: 366 PDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNV 425

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
              M     KP   TY++L+ GY  V +  ++  +   MS  + V  N ++YNI++  +C
Sbjct: 426 LAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSH-RGVTANVQSYNIMINGFC 484

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               ++EA  +  +M    I PD +TY++L     + G    A +++ EM     +P+  
Sbjct: 485 KIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDII 544

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   I+   CK+ +++ A+  L ++K   + P++  +  L+KG   +  S  ++ A  + 
Sbjct: 545 TYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKG---LCQSGKLEDARKVF 601

Query: 267 EEFGVKP---DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           E+  VK    DV  ++ ++  +   GL  +   +   M + G  PD   + I+       
Sbjct: 602 EDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEK 661

Query: 324 GEPQKAESILTSMRKYG----VHPNVVMFTTVISGWC 356
            E   AE +L  M   G    +  ++V    V   WC
Sbjct: 662 DENDMAEKLLREMIMRGLLVALTDDLVASILVRRTWC 698



 Score = 43.5 bits (101), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 45/87 (51%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK  +A  +F  L+ +G+   +  YT ++     +  F   L+L+SK+E++G  PD
Sbjct: 588 LCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPD 647

Query: 64  SILFNAMINACSESGNVDEAMKIFQKM 90
           +  +  +I +  E    D A K+ ++M
Sbjct: 648 AKTYEIIILSLFEKDENDMAEKLLREM 674


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 224/463 (48%), Gaps = 36/463 (7%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA+   + + + G  P   TYT+L+    R     S   + + +   G + + + +  +I
Sbjct: 232 EANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTII 291

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   E+G +DE + +F+KM++  C PT  TY  +I       +  E + L   M ++++ 
Sbjct: 292 HGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEM-RERSC 350

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +PN  TY ++V A C +  ++E+  ++ +M+  G+ P  VTYN L R Y + G    A +
Sbjct: 351 EPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALE 410

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L  M++N  RPNERT   ++ G+ K  ++  AM  L +M E ++ P+LV +NSLI    
Sbjct: 411 ILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQC 470

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                D   K L L++E G+ PD  T+S  +D    +  M +  ++F+ + + GI+ +  
Sbjct: 471 KAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEV 530

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
           +++ L  G+ +AG+  +A S+L  M      PN   + ++I G C   K+Q  +S+ E M
Sbjct: 531 MYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENM 590

Query: 372 CEIGINPNLKTYETL-------------------LWGYGEAKQPW--------------- 397
            ++G+ P + TY  L                   +  +G     +               
Sbjct: 591 SKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNV 650

Query: 398 -RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             AE ++  M E GV P   T  L+  ++  +GLA +A  VLK
Sbjct: 651 KEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLK 693



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 210/413 (50%), Gaps = 7/413 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  E   +F  + E+   PT+ TYT ++ AL    R    + L +++ +   +P+
Sbjct: 294 LCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPN 353

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +  M++A  +   +DE+ +I  +M + G  P+  TYN LI+GY   G+ E +L++L 
Sbjct: 354 VHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILG 413

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           LM +  N +PN+RTYN L+  +  +  + +A  ++ KM+ S + P  VTYN+L     + 
Sbjct: 414 LM-ESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKA 472

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A ++L  ++ N + P++ T  + +   CK   ME+A      +KE  +  N V++
Sbjct: 473 GHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMY 532

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            +LI G      +  +D+A++L+E    +   P+  T+++++      G + +   + ++
Sbjct: 533 TALIDGHC---KAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVEN 589

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M K G++P +  ++IL +  +R G+   A  +   M  +G  P+V  +T  I  +C +  
Sbjct: 590 MSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGN 649

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           ++ A  +  +M E G+ P+  TY  L+  Y      + A  +L+ M + G  P
Sbjct: 650 VKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDP 702



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 195/391 (49%), Gaps = 7/391 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L G  +  E   +FN + E    P + TYT +V A+ ++++      +++++ + G+
Sbjct: 326 IHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGL 385

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + +NA+I    E G ++ A++I   M+ + C+P   TYN LI G+       +++ 
Sbjct: 386 VPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMT 445

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M + K + P+  TYN L+   C     + A+ ++  +  +G+ PD  TY+      
Sbjct: 446 LLSKMLESK-LTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTL 504

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A  +   ++   ++ NE     ++ G+CK G +++A+  L RM   +  PN 
Sbjct: 505 CKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNS 564

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLME---EFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             +NSLI G   +     V + L+++E   + GVKP V T++ +++     G       +
Sbjct: 565 STYNSLIYG---VCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRV 621

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F+ MV  G +PD++ ++     Y  +G  ++AE ++  M + GV P+ + +T +IS +  
Sbjct: 622 FNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYER 681

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
                 A ++ ++M + G +P+   +  L+W
Sbjct: 682 LGLAYDAFNVLKRMLDAGCDPSHPIWNNLIW 712



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 82/385 (21%), Positives = 167/385 (43%), Gaps = 4/385 (1%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N ++   +    +DE  +++ +M +    P   T NT++  Y  +G   E+   +  + 
Sbjct: 182 YNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIF 241

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           Q   + P+  TY  L+  +C  N +  A+ V   M   G + + V+Y T+     + G  
Sbjct: 242 Q-AGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRI 300

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSG-YCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
                +  +M+ +   P  RT  +I+   +  + N+E  M     M+E    PN+  +  
Sbjct: 301 DEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLE-GMDLFNEMRERSCEPNVHTYTV 359

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           ++      +  D   + L  M E G+ P VVT++ ++  +   G +    EI   M    
Sbjct: 360 MVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNN 419

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
             P+   ++ L  G+ +     KA ++L+ M +  + P++V + ++I   C A     A 
Sbjct: 420 CRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAY 479

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            + + + E G+ P+  TY   +    ++K+   A +L   ++EKG++  +     + D  
Sbjct: 480 KLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGH 539

Query: 426 RAIGLAREAKRVLKSAEEDRQSMPN 450
              G   EA  +L+    +   +PN
Sbjct: 540 CKAGKIDEAISLLERMHSE-DCLPN 563



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/379 (23%), Positives = 168/379 (44%), Gaps = 40/379 (10%)

Query: 104 TLIKGYGNVGKPEESLKLLQLMSQDKN---VKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
           ++IK   +V      L  L+ M++D N    K + R+YN L+        I+E   V  +
Sbjct: 145 SMIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTE 204

Query: 161 MVASGIQPDAVTYNTLARAYAQYGE---------------------TY------------ 187
           M+   I P+  T NT+  AY++ G                      TY            
Sbjct: 205 MLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNND 264

Query: 188 --RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A ++   M N   R NE +   I+ G C+ G +++ +    +M+E + +P +  +  
Sbjct: 265 VNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTV 324

Query: 246 LIKG-FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +I   F + ++ +G+D     M E   +P+V T++ ++DA      + + + I ++M++ 
Sbjct: 325 IIHALFGNDRNLEGMD-LFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEK 383

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+ P +  ++ L +GY   G  + A  IL  M      PN   +  +I G+     + +A
Sbjct: 384 GLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKA 443

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           M++  KM E  + P+L TY +L+    +A     A +LL +++E G+ P + T  +  D+
Sbjct: 444 MTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDT 503

Query: 425 WRAIGLAREAKRVLKSAEE 443
                   EA  +  S +E
Sbjct: 504 LCKSKRMEEACDLFNSLKE 522


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 207/428 (48%), Gaps = 36/428 (8%)

Query: 47  SILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLI 106
           S  S+ + + K G + + + +  +I+   E G VDE + IF+KM++  C PT  TY  ++
Sbjct: 22  SAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIV 81

Query: 107 KGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGI 166
                 G+  E++ L   M +++  +PN  TY +++ A C +  +EE   ++ +MV  G+
Sbjct: 82  HALFESGRRMEAINLFSEM-RERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGL 140

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR 226
            P   TYN L   Y + G    A+++L  M +N   PNERT   ++ G+C++ N+  AM 
Sbjct: 141 VPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMA 200

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
            L +M E  + P++V +NSLI G   I   D   + L LM E GV PD  T+S  +D   
Sbjct: 201 LLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLC 260

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
             G + +   +F+ + + GI+ +  +++ L  GY +AG+   A S+L  M      PN  
Sbjct: 261 KKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSS 320

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL--------WGYGE------ 392
            +  +I G C   K+Q A+ + E M + G+   + TY  L+        + Y        
Sbjct: 321 TYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQM 380

Query: 393 ---AKQP------------------WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
                QP                    AE+++ +M E+GV P   T  LV D++  +GL 
Sbjct: 381 VSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLL 440

Query: 432 REAKRVLK 439
             A  VLK
Sbjct: 441 NPAFDVLK 448



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 206/430 (47%), Gaps = 1/430 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  E   IF  + E+   PT+ TYT +V AL    R    ++L S++ + G +P+   +
Sbjct: 53  GRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTY 112

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             MINA  +   ++E  +I  +M + G  P+  TYN LI GY   G  E + ++L LM  
Sbjct: 113 TVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHS 172

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           + +  PN+RTYN L+  +C K ++  A  ++ KM+ S + P  VTYN+L     + G   
Sbjct: 173 N-SCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLD 231

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++L  M  N V P++ T  + +   CK+G +E+A      +KE  +  N V++ +LI
Sbjct: 232 SAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALI 291

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G+      D  +  L  M      P+  T++ ++D       + +   + + M++ G++
Sbjct: 292 DGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLK 351

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
             +  ++IL    ++ G+   A  IL  M   G  P+V ++T  I  +C    ++ A  +
Sbjct: 352 CTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDM 411

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
              M E G+ P+  TY  ++  YG       A ++L+ M + G  P   T   +      
Sbjct: 412 MSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLK 471

Query: 428 IGLAREAKRV 437
             L ++ K V
Sbjct: 472 EELTKKYKNV 481



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 115/478 (24%), Positives = 215/478 (44%), Gaps = 42/478 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  + K  E   I + ++E+G  P++ TY  L+    ++   ++   ++  +  +  
Sbjct: 116 INAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSC 175

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   +N +I       NV  AM +  KM +S   P+  TYN+LI G   +G  + + +
Sbjct: 176 NPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYR 235

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL LM+++  V P+  TY++ +   C K  IEEA  +   +   GI+ + V Y  L   Y
Sbjct: 236 LLNLMNEN-GVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGY 294

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM--------------- 225
            + G+   A  +L  M      PN  T   ++ G CKE  +++A+               
Sbjct: 295 CKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTV 354

Query: 226 --------------------RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
                               R L +M      P++ ++ + I  F    +    +  +++
Sbjct: 355 PTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSM 414

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M E GV PD +T++ ++DA+   GL+    ++   M   G +P  H +S L K  ++   
Sbjct: 415 MFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEEL 474

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            +K +++          PN V F  V   W   +K + A+ ++EKM E G +PN+ TY  
Sbjct: 475 TKKYKNVALC----DSIPN-VFFADVADVW-KMMKFETALELFEKMLEHGCSPNINTYAK 528

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           L+ G  +  +   A++L   M E+GV P ++    + +    +G+  +A R++ +  E
Sbjct: 529 LIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMME 586



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 189/387 (48%), Gaps = 7/387 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  EA  +F+ + E G  P + TYT ++ A+ ++ + +    ++ ++ + G+ P 
Sbjct: 84  LFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPS 143

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +NA+I+   + G V+ A +I   M  + C P   TYN LI G+        ++ LL 
Sbjct: 144 VPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLS 203

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + + + P+  TYN L+   C    ++ A+ ++  M  +G+ PD  TY+       + 
Sbjct: 204 KMLESR-LTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKK 262

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A  +   ++   ++ NE     ++ GYCK G M+DA   L RM   +  PN   +
Sbjct: 263 GRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTY 322

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N+LI G    +    V +AL LME     G+K  V T++ ++ A    G       I D 
Sbjct: 323 NALIDGLCKERK---VQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQ 379

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV +G +PD+++++     +   G  ++AE +++ M + GV P+ + +T VI  +     
Sbjct: 380 MVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGL 439

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLL 387
           +  A  + ++M + G +P+  TY  L+
Sbjct: 440 LNPAFDVLKRMFDTGCDPSHHTYSCLI 466



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 198/435 (45%), Gaps = 7/435 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A+ + N + E G  P   TY+  +  L ++ R +    L + +++ G+K + +++
Sbjct: 228 GYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIY 287

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            A+I+   ++G +D+A  +  +M    C P +STYN LI G     K +E+L L++ M Q
Sbjct: 288 TALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQ 347

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K +K    TY IL+ A   +   + A  ++ +MV+SG QPD   Y     A+   G   
Sbjct: 348 -KGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIK 406

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            AE M+  M    V P+  T  +++  Y   G +  A   L RM +    P+   ++ LI
Sbjct: 407 EAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLI 466

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           K  L  + +    K + L +     P+V  F+ + D W          E+F+ M++ G  
Sbjct: 467 KHLLKEELTKKY-KNVALCDSI---PNVF-FADVADVWKMMKF-ETALELFEKMLEHGCS 520

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P+I+ ++ L  G  + G    A+ +   M + GV P+  ++ ++++  C       A+ +
Sbjct: 521 PNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRL 580

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
              M E G  P L++   L  G  E     +A+ +   + + G    +   +++ D    
Sbjct: 581 VGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLK 640

Query: 428 IGLAREAKRVLKSAE 442
            GL+     +L   E
Sbjct: 641 NGLSDGCSELLGVME 655



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/383 (22%), Positives = 162/383 (42%), Gaps = 30/383 (7%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  KG+  EA+ +FN L E+G +   + YT L+    +  +     SL+ ++  +  
Sbjct: 256 IDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDC 315

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+S  +NA+I+   +   V EA+ + + M   G K T  TY  LI      G  + + +
Sbjct: 316 LPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHR 375

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M      +P+   Y   + A+C++ +I+EA +++  M   G+ PDA+TY  +  AY
Sbjct: 376 ILDQMVS-SGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAY 434

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEG--------------------- 219
              G    A  +L  M +    P+  T   ++    KE                      
Sbjct: 435 GGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFAD 494

Query: 220 --------NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
                     E A+    +M E    PN+  +  LI G   +       K    M E GV
Sbjct: 495 VADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGV 554

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            P    ++++++     G+ G    +   M++ G  P +   ++L  G    G  +KA+ 
Sbjct: 555 SPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKV 614

Query: 332 ILTSMRKYGVHPNVVMFTTVISG 354
           + +++ + G + + V +  +I G
Sbjct: 615 VFSNLLQCGYNDDEVAWKILIDG 637



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 149/343 (43%), Gaps = 11/343 (3%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  + K  EA  +   +I++G + T+ TYT L+ A+ ++  F     ++ ++   G +PD
Sbjct: 329 LCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPD 388

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             ++ A I+A    GN+ EA  +   M + G  P   TY  +I  YG +G    +  +L+
Sbjct: 389 VYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLK 448

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D    P+  TY+ L+     K+ ++E     YK VA       V +  +A  +   
Sbjct: 449 RMF-DTGCDPSHHTYSCLI-----KHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMM 502

Query: 184 GETYRAEQMLFE-MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
              +     LFE M  +   PN  T   ++ G CK G +  A +    M E  V P+  +
Sbjct: 503 --KFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAI 560

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +NSL+    ++       + +  M E G  P + + + +       G   K + +F +++
Sbjct: 561 YNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLL 620

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG--VHP 343
           + G   D   + IL  G ++ G       +L  M   G  +HP
Sbjct: 621 QCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHP 663



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/327 (22%), Positives = 130/327 (39%), Gaps = 38/327 (11%)

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M   K  + N+ +Y  L+   C    ++E  N+  KM      P   TY  +  A  + G
Sbjct: 29  MMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESG 88

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
               A  +  EM+     PN  T  ++++  CKE  +E+  R L  M E           
Sbjct: 89  RRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEK---------- 138

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
                                    G+ P V T++ ++D +   G++   QEI D M   
Sbjct: 139 -------------------------GLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSN 173

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
              P+   ++ L  G+ R     +A ++L+ M +  + P+VV + ++I G C    +  A
Sbjct: 174 SCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSA 233

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             +   M E G+ P+  TY   +    +  +   A  L   ++EKG++  +     + D 
Sbjct: 234 YRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDG 293

Query: 425 WRAIGLAREAKRVL-KSAEEDRQSMPN 450
           +   G   +A  +L +   ED   +PN
Sbjct: 294 YCKAGKMDDANSLLDRMLTED--CLPN 318



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 123/284 (43%), Gaps = 11/284 (3%)

Query: 211 IVSGYCKEGNM---------EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           +V+GYCK GN+           A      M +     N V + +LI G  ++   D    
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
               M E    P V T++ I+ A   +G   +   +F +M + G EP+IH ++++     
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           +  + ++   IL  M + G+ P+V  +  +I G+C    ++ A  I + M     NPN +
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY  L+ G+   K   RA  LL  M E  + P   T   +      IG    A R+L   
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 442 EEDRQSMPNKKDEIAVESIHRKQNLSASNSTF--LQIPGVVSSE 483
            E+          + ++++ +K  +  +N  F  L+  G+ ++E
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANE 284



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 9/165 (5%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  ++E G  P + TY  L+  L +  R      L   + + G+ P   ++N+++N C 
Sbjct: 510 LFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCC 569

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES----LKLLQLMSQDKNV 131
           E G   +A+++   M + G  P   + N L  G    G  E++      LLQ    D  V
Sbjct: 570 ELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEV 629

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
                 + IL+         +    ++  M A G Q    TY  L
Sbjct: 630 -----AWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRML 669


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 223/444 (50%), Gaps = 1/444 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  + +   A  I   +++ G+ P+++T  +L+       R    ++L+ ++ + G 
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD++ F  +++   +     EA+ + ++M   GC+P   TY  +I G    G+P+ +L 
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M + K ++ +   Y+ ++ + C    +++A N+  +M   GI+PD  TY++L    
Sbjct: 227 LLNKMEKGK-IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
             YG    A ++L +M   ++ PN  T   ++  + KEG + +A +    M +  + PN+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +NSLI GF      D   +  TLM      PDVVT++T+++ +  A  +    E+F D
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M + G+  +   ++ L  G+ +A +   A+ +   M   GVHPN++ + T++ G C   K
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +++AM ++E + +  + P++ TY  +  G  +A +     +L   +  KGV+P       
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525

Query: 421 VADSWRAIGLAREAKRVLKSAEED 444
           +   +   GL  EA  +    +ED
Sbjct: 526 MISGFCKKGLKEEAYTLFIKMKED 549



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 218/420 (51%), Gaps = 1/420 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L    K  EA  +   ++ +G +P L+TY  ++  L ++      L+L++K+EK  ++ D
Sbjct: 180 LFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD 239

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            ++++ +I++  +  +VD+A+ +F +M + G +P   TY++LI    N G+  ++ +LL 
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + K + PN  T+N L+ A+  +  + EA  +  +M+   I P+ VTYN+L   +  +
Sbjct: 300 DMLERK-INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                A+Q+   M +    P+  T   +++G+CK   + D M     M    +  N V +
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            +LI GF    D D        M   GV P+++T++T++D     G + K   +F+ + K
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           + +EPDI+ ++I+++G  +AG+ +    +  S+   GV P+V+ + T+ISG+C     + 
Sbjct: 479 SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEE 538

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A +++ KM E G  P+  TY TL+  +        + EL++ M         ST  LV D
Sbjct: 539 AYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 598



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 212/427 (49%), Gaps = 6/427 (1%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  +F  +++    P+++ ++ L++A+ + K+F  ++S   K+E  G+  +   +N
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            MIN       +  A+ I  KM   G  P+  T N+L+ G+ +  +  E++ L+  M + 
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE- 163

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
              +P+  T+  LV      N   EA  +V +MV  G QPD VTY  +     + GE   
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  +L +M+  ++  +      ++   CK  +++DA+     M    + P++  ++SLI 
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
              +        + L+ M E  + P+VVTF++++DA++  G + + +++FD+M++  I+P
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           +I  ++ L  G+       +A+ I T M      P+VV + T+I+G+C A K+   M ++
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
             M   G+  N  TY TL+ G+ +A     A+ + + M   GV P   T   + D     
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD----- 458

Query: 429 GLAREAK 435
           GL +  K
Sbjct: 459 GLCKNGK 465


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 221/423 (52%), Gaps = 1/423 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  + K  EA  +   ++E G +P ++TY ++V  + +       L L+ K+++  +
Sbjct: 142 INGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNV 201

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K D   ++ +I++    G +D A+ +F++M+  G K +  TYN+L+ G    GK  + ++
Sbjct: 202 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQ 261

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M+  K + PN  T+N+L+  +  +  ++EA  +  +M+  GI P+ +TYN+L   Y
Sbjct: 262 LLKDMTSRK-IIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGY 320

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                   A  ML  M  N   P+  T   ++ GYCK   +++ M+   ++ +  +  N 
Sbjct: 321 CMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANT 380

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V ++ L++GF      +  ++    M   GV PDV+T+  ++D     G + K  EIF+D
Sbjct: 381 VTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFED 440

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           + K+ +  DI +++I+ +G  + G+ + A ++  S+   GV PNV+ +T +ISG C    
Sbjct: 441 LQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 500

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  +  KM E G  PN  TY TL+  +        + +L++ M+  G     S+I++
Sbjct: 501 LSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKM 560

Query: 421 VAD 423
           V D
Sbjct: 561 VID 563



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 225/455 (49%), Gaps = 5/455 (1%)

Query: 50  SLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY 109
           S++ KV K G +PD+  FN +IN       V EA+ +  +M ++GC+P   TYN+++ G 
Sbjct: 121 SVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGI 180

Query: 110 GNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
              G    +L LL+ M + +NVK +  TY+ ++ + C    I+ A ++  +M   GI+  
Sbjct: 181 CKSGDTSLALDLLRKMDE-RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSS 239

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
            VTYN+L     + G+     Q+L +M + ++ PN  T  +++  + KEG +++A     
Sbjct: 240 LVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYK 299

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            M    + PN + +NSL+ G+         +  L LM      PD+VTF++++  +    
Sbjct: 300 EMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVK 359

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
            + +  ++F  + K G+  +   +SIL +G+ ++G+ + AE +   M   GV P+V+ + 
Sbjct: 360 RVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYG 419

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
            ++ G C+  K+++A+ I+E + +  +N ++  Y  ++ G  +  +   A  L   +  K
Sbjct: 420 ILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCK 479

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSAS 469
           GV+P   T  ++       G   EA  +L+  EED     +      + +  R  +L+AS
Sbjct: 480 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTAS 539

Query: 470 NSTFLQIPGVVSSEHNGSSAAKIRSQIVLRSDTVW 504
                ++     S    + A+ I+  I + S  VW
Sbjct: 540 AKLIEEMKSCGFS----ADASSIKMVIDMLSSAVW 570



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/433 (24%), Positives = 195/433 (45%), Gaps = 38/433 (8%)

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           D+A+ +FQ+M  S   P+   ++    G  +  +    L   + M  +  +  N  T NI
Sbjct: 47  DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELN-GIAHNIYTLNI 105

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           ++  +C       A++V+ K++  G +PD  T+NTL        +   A  ++  M  N 
Sbjct: 106 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENG 165

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRM----------------------------- 231
            +PN  T   IV+G CK G+   A+  L +M                             
Sbjct: 166 CQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAI 225

Query: 232 ---KELE---VHPNLVVFNSLIKGFLDI-KDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
              KE+E   +  +LV +NSL+ G     K +DGV + L  M    + P+V+TF+ ++D 
Sbjct: 226 SLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGV-QLLKDMTSRKIIPNVITFNVLIDV 284

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           +   G + +  E++ +M+  GI P+   ++ L  GY       +A ++L  M +    P+
Sbjct: 285 FVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPD 344

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
           +V FT++I G+C   ++   M ++ K+ + G+  N  TY  L+ G+ ++ +   AEEL Q
Sbjct: 345 IVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQ 404

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQ 464
            M   GV P   T  ++ D     G   +A  + +  ++ + ++      I +E + +  
Sbjct: 405 EMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGG 464

Query: 465 NLSASNSTFLQIP 477
            +  + + F  +P
Sbjct: 465 KVEDAWNLFCSLP 477



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 1/197 (0%)

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           L  G +DIK+ D +D    ++    + P +V FS      +S        +    M   G
Sbjct: 37  LRSGIVDIKEDDAIDLFQEMIRSRPL-PSLVDFSRFFSGVASTKQFNLVLDFCKKMELNG 95

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           I  +I+  +I+   + R  +   A S+L  + K G  P+   F T+I+G C   K+  A+
Sbjct: 96  IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAV 155

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            +  +M E G  PN+ TY +++ G  ++     A +LL+ M+E+ V+    T   + DS 
Sbjct: 156 VLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSL 215

Query: 426 RAIGLAREAKRVLKSAE 442
              G    A  + K  E
Sbjct: 216 CRDGCIDAAISLFKEME 232


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 215/416 (51%), Gaps = 3/416 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  +G   EA  I + L   G +P  +TYT ++ +L   +R+K +  L +++  +  
Sbjct: 239 INAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKC 298

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + FN ++ +  + G VD A+K+   M + GC P   TY++++ G  +VG+ +++++
Sbjct: 299 APDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVE 358

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  + +    KP+   Y  +++  CS    E A  ++ +MV S   PD VT+NT+  + 
Sbjct: 359 LLSRL-KSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASL 417

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G   RA +++ +M  N   P+  T   I+ G C E  ++DAM  L  ++     P++
Sbjct: 418 CQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDI 477

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V FN+L+KG   +   +  ++ +  M      PD  TF+T++ +    GL+ +  E    
Sbjct: 478 VTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKI 537

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M + G  P+   ++I+    ++AG+ Q+A  +L+ M      P+++ + TVIS    A K
Sbjct: 538 MAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGK 595

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
           M+ A+ +   M   G++P+  TY +L +G        RA  +L  +++ G+ P  +
Sbjct: 596 MEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDAT 651



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 223/454 (49%), Gaps = 12/454 (2%)

Query: 2   NILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NIL+ +    G+  +A  +F  L   G   T++TY T+V    R  R +    LIS +  
Sbjct: 102 NILIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDARRLISGMP- 157

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
               PD+  FN +I A    G V +A+ +F  M   GC P+  TY+ L+          +
Sbjct: 158 --FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQ 215

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           ++ LL  M + K  +P+  TYN+L+ A C++  ++EA N++  + + G +PDAVTY  + 
Sbjct: 216 AMVLLDEM-RAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVL 274

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
           ++          E++  EM +N+  P+E T   IV+  C++G ++ A++ +  M E    
Sbjct: 275 KSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCI 334

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P++V ++S++ G  D+   D   + L+ ++ +G KPD + ++T++    S       +E+
Sbjct: 335 PDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEEL 394

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
             +MV +   PD   F+ +     + G   +A  ++  M + G +P++V + ++I G CN
Sbjct: 395 MAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCN 454

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              +  AM +   +   G  P++ T+ TLL G     +   AE+L+  M      P  +T
Sbjct: 455 ERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATT 514

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
              V  S    GL  +A   LK   E+   +PN+
Sbjct: 515 FNTVITSLCQKGLLLQAIETLKIMAEN-GCIPNQ 547



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 192/403 (47%), Gaps = 1/403 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  +A  +F+ ++  G  P+++TY+ L+ A  +   ++  + L+ ++   G +PD
Sbjct: 172 LCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPD 231

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +INA    G+VDEA+ I   +   GCKP   TY  ++K      + +E  +L  
Sbjct: 232 IVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFA 291

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M+ +K   P++ T+N +V + C +  ++ A  VV  M   G  PD VTY+++       
Sbjct: 292 EMASNK-CAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDV 350

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A ++L  +++   +P+      ++ G C     E A   +  M   +  P+ V F
Sbjct: 351 GRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTF 410

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N++I         D   K +  M E G  PD+VT+++I+D   +   +    E+  ++  
Sbjct: 411 NTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQS 470

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G +PDI  F+ L KG       + AE ++ +M      P+   F TVI+  C    + +
Sbjct: 471 YGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQ 530

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
           A+   + M E G  PN  TY  ++    +A +   A +LL  M
Sbjct: 531 AIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGM 573



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/411 (24%), Positives = 193/411 (46%), Gaps = 3/411 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G    A  + + + E G  P ++TY++++  L    R    + L+S+++  G KPD
Sbjct: 312 LCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPD 371

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +I +  ++         + A ++  +M  S C P   T+NT+I      G  + ++K+++
Sbjct: 372 TIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVE 431

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            MS++    P+  TYN ++   C++  I++A  ++  + + G +PD VT+NTL +     
Sbjct: 432 QMSEN-GCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSV 490

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                AEQ++  M ++   P+  T   +++  C++G +  A+  L  M E    PN   +
Sbjct: 491 DRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTY 550

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N ++   L    +    K L+ M      PD++T++T++   + AG M +  ++   MV 
Sbjct: 551 NIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVS 608

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ PD   +  LA G  R     +A  +L  ++  G+ P+   +  ++ G+C   +   
Sbjct: 609 NGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDI 668

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
           A+  +  M   G  P+  TY  LL           A++LL  +   GV  K
Sbjct: 669 AIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGVLDK 719


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 218/420 (51%), Gaps = 7/420 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  EA  +FN ++  GH+P +I+Y+T++  L +       L L+ K+E+ G KP+ + 
Sbjct: 175 EGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVA 234

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +  +I++  +   V++AM +  +M D G  P   TY+T++ G+ ++G   E+  L   M 
Sbjct: 235 YTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMV 294

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             +NV PN  T+ ILV   C +  + EA  V   M   G +P+A TYN L   Y    + 
Sbjct: 295 -GRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQM 353

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+++L  M +    P   +  I+++GYCK   +++A   L  M E E+ P+ V +++L
Sbjct: 354 DEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTL 413

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           ++G   +       +AL L +E    G+ PD++T+ST++D     G + +  ++   M +
Sbjct: 414 MQGLCQVGRPQ---EALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQE 470

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           + IEPDI +++IL +G   AG+ + A+ + + +   G+ P +  +T +I G         
Sbjct: 471 SKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDE 530

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  ++ KM + G  PN  +Y  ++ G+ + +    A  L+  M  K      ST Q++ D
Sbjct: 531 AYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLD 590



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 207/416 (49%), Gaps = 2/416 (0%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           L+  L R       +S++ K+ K G++PD+I FN +IN     G + EA+ +F +M   G
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
            +P   +Y+T+I G    G    +L+LL+ M ++K  KPN   Y  ++ + C    + +A
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKM-EEKGCKPNLVAYTTIIDSLCKDTLVNDA 251

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
            +++ +MV  GI PD VTY+T+   +   G    A  +  EM    V PN  T  I+V G
Sbjct: 252 MDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDG 311

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
            CKEG + +A      M +    PN   +N+L+ G+      D   K L +M + G  P 
Sbjct: 312 LCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPV 371

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           V +++ +++ +     + + + +  +M +  + PD   +S L +G  + G PQ+A ++  
Sbjct: 372 VHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFK 431

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            M   G+ P+++ ++T++ G C    +  A+ + + M E  I P++  Y  L+ G   A 
Sbjct: 432 EMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAG 491

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           +   A+EL   +   G++P   T  ++       GL+ EA  + +  E+D   +PN
Sbjct: 492 KLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDD-GFLPN 546



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 103/423 (24%), Positives = 199/423 (47%), Gaps = 42/423 (9%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           RP+++ +   + ++ ++K++ +++SL ++++  G+  +    N +IN      +V  A+ 
Sbjct: 89  RPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAIS 148

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +  KM   G                                    ++P+  T+N L+   
Sbjct: 149 VLGKMFKLG------------------------------------IQPDAITFNTLINGR 172

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C +  I+EA  +  +MV  G QPD ++Y+T+     + G T  A Q+L +M+    +PN 
Sbjct: 173 CIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNL 232

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
                I+   CK+  + DAM  L  M +  + P++V +++++ GF  +     +++A  L
Sbjct: 233 VAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGH---LNEATIL 289

Query: 266 MEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
             E     V P+ VTF+ ++D     G++ + + +F+ M K G EP+ + ++ L  GY  
Sbjct: 290 FNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCL 349

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
             +  +A+ +L  M   G  P V  +  +I+G+C   ++  A S+  +M E  + P+  T
Sbjct: 350 NNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVT 409

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           Y TL+ G  +  +P  A  L + M   G+ P   T   + D     G   EA ++LKS +
Sbjct: 410 YSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQ 469

Query: 443 EDR 445
           E +
Sbjct: 470 ESK 472



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 164/369 (44%), Gaps = 40/369 (10%)

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK--NVKPN 134
           S ++D+A+  F +M     +P+   +   +   G++ K ++   ++ L +Q     V  N
Sbjct: 70  SISIDDALASFYRMLRMNPRPSVVEFGRFL---GSIAKKKQYSTVVSLCNQMDLFGVTHN 126

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
             + NIL+   C  N +  A +V+ KM   GIQPDA+T+NTL       GE   A  +  
Sbjct: 127 VYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFN 186

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           EM     +P+  +   +++G CK GN   A++ L +                        
Sbjct: 187 EMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRK------------------------ 222

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
                      MEE G KP++V ++TI+D+     L+    ++  +MV  GI PD+  +S
Sbjct: 223 -----------MEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYS 271

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            +  G+   G   +A  +   M    V PN V FT ++ G C    +  A  ++E M + 
Sbjct: 272 TILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKK 331

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G  PN  TY  L+ GY    Q   A+++L +M +KG  P   +  ++ + +       EA
Sbjct: 332 GAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEA 391

Query: 435 KRVLKSAEE 443
           K +L    E
Sbjct: 392 KSLLVEMSE 400


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 222/418 (53%), Gaps = 7/418 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  KG+  +A    + ++  G     I+Y TL+  L +    ++ L L+ +V+ + ++P+
Sbjct: 165 LCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPN 224

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++N +I++  +   V+EA  +F +M   G  P   TY+ LI G+  +GK  +++ L  
Sbjct: 225 VVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFN 284

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  + N+KP+  T+NILV A+C    ++E   V   M+  GI+P+ VTYN+L   Y   
Sbjct: 285 KMILE-NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLV 343

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E  +A+ +   M    V P+ ++  I+++G+CK    ++AM     M    + P++V +
Sbjct: 344 KEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTY 403

Query: 244 NSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +SLI G   +  S  +  AL L   M + GV P + T+++I+DA      + K   +   
Sbjct: 404 SSLIDG---LSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTK 460

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +   GI+P+++ +SIL KG  ++G+ + A  +   +   G + NV  +T +I G+C    
Sbjct: 461 LKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGL 520

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
              A+++  KM + G  P+ KTYE ++    +  +   AE+LL+ M  +GVRP++  I
Sbjct: 521 FNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIAI 578



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 232/489 (47%), Gaps = 40/489 (8%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +FN L+     P    +  ++ +L + K + ++L L  K+E  G+KP+ +  N +I
Sbjct: 68  DAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILI 127

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG----------------------- 108
           N   + G +  A  +F K+   G  P T T+ TLIKG                       
Sbjct: 128 NCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFH 187

Query: 109 -----YGN-------VGKPEESLKLLQLMSQDKN-VKPNDRTYNILVRAWCSKNSIEEAW 155
                YG        VG+   +L LLQ +  D N V+PN   YN ++ + C    + EA+
Sbjct: 188 FDQISYGTLIHGLCKVGETRAALDLLQRV--DGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
           ++  +M++ GI PD VTY+ L   +   G+   A  +  +M    ++P+  T  I+V+ +
Sbjct: 246 DLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAF 305

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           CK+G M++       M +  + PN V +NSL+ G+  +K+ +        M + GV PD+
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
            ++S +++ +       +   +F +M +  I PD+  +S L  G  ++G    A  ++  
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M   GV P +  + +++   C   ++ +A+++  K+ + GI PN+ TY  L+ G  ++ +
Sbjct: 426 MHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGK 485

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKD-E 454
              A ++ + +  KG      T  ++   +   GL  EA  +L S  ED   +P+ K  E
Sbjct: 486 LEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALL-SKMEDNGCIPDAKTYE 544

Query: 455 IAVESIHRK 463
           I + S+ +K
Sbjct: 545 IIILSLFKK 553



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 216/435 (49%), Gaps = 4/435 (0%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           FN +     +   I+Y++              +SL +++ +    P +  FN ++ +  +
Sbjct: 38  FNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVK 97

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
           S +    + + QKM+  G KP     N LI  +  +G    +  +   + +   V P+  
Sbjct: 98  SKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYV-PDTI 156

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           T+  L++  C K  I++A+    K+VA G   D ++Y TL     + GET  A  +L  +
Sbjct: 157 TFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV 216

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI-KD 255
             N V+PN      I+   CK   + +A      M    + P++V +++LI GF  + K 
Sbjct: 217 DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKL 276

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
           +D +D    ++ E  +KPDV TF+ +++A+   G M + + +FD M+K GI+P+   ++ 
Sbjct: 277 NDAIDLFNKMILE-NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNS 335

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  GY    E  KA+SI  +M + GV+P++  ++ +I+G+C   K   AM+++++M    
Sbjct: 336 LMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN 395

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           I P++ TY +L+ G  ++ +   A +L+  M ++GV P   T   + D+   I    +A 
Sbjct: 396 IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAI 455

Query: 436 RVLKSAEEDRQSMPN 450
            +L +  +D+   PN
Sbjct: 456 ALL-TKLKDKGIQPN 469



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 136/277 (49%), Gaps = 5/277 (1%)

Query: 1   MNILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
            NILV      GK  E   +F+ ++++G +P  +TY +L+      K      S+ + + 
Sbjct: 298 FNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMA 357

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           + G+ PD   ++ MIN   +    DEAM +F++M      P   TY++LI G    G+  
Sbjct: 358 QGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRIS 417

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
            +L+L+  M  D+ V P  RTYN ++ A C  + +++A  ++ K+   GIQP+  TY+ L
Sbjct: 418 YALQLVDQM-HDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSIL 476

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
            +   Q G+   A ++   +       N  T  I++ G+C EG   +A+  L +M++   
Sbjct: 477 IKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGC 536

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
            P+   +  +I       ++D  +K L  M   GV+P
Sbjct: 537 IPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 208/414 (50%), Gaps = 1/414 (0%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           +   L+  L R       +S++ K+ K G++PD+I FN +IN     G + EA+ +F +M
Sbjct: 133 SLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEM 192

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
             SG +P   +YNT+I G    G    ++++ + M Q++  KPN  TYN ++ + C    
Sbjct: 193 VWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRG-KPNVVTYNTIIDSLCKDRL 251

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           + EA   + +MV  GI PD VTYNT+   +   G+   A ++  EM    V P+  T  I
Sbjct: 252 VNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNI 311

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           +V G CKEG + +A      M E    PN   +N+L+ G+      D   K L +M   G
Sbjct: 312 LVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKG 371

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
             P++ +++ +++ +  +  M + + +  +M +  + PD   +S L +G  + G P++A 
Sbjct: 372 CAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREAL 431

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           ++   M   G+ P+++ ++ ++ G+C    +  A+ + ++M E  I PN+  Y  L+ G 
Sbjct: 432 NLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGM 491

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
             A +   A+EL   +   G+RP   T  ++       GL+ EA    +  E+D
Sbjct: 492 FIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDD 545



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 221/426 (51%), Gaps = 7/426 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +GK  EA  +FN ++  GH P +I+Y T++  L +       + +  K+E++  
Sbjct: 173 INGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRG 232

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP+ + +N +I++  +   V+EA++   +M D G  P   TYNT++ G+ ++G+  E+ +
Sbjct: 233 KPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATR 292

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M   +NV P+  T+NILV   C +  + EA  V   M   G +P+A TYN L   Y
Sbjct: 293 LFKEMV-GRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGY 351

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
             + +   A ++L  M      PN  +  I+++GYCK   M +A R L  M E  + P+ 
Sbjct: 352 CLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDT 411

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +++L++G   +       +AL L +E    G+ PD++ +S ++D +   G + +  ++
Sbjct: 412 VTYSTLMQGLCQVGRP---REALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKL 468

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
             +M +  I+P+I +++IL +G   AG+ + A+ + + +   G+ P++  +  +I G   
Sbjct: 469 LKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLK 528

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
                 A   + KM + G  P+  +Y  ++ G+ + +    A +L+  M  K      ST
Sbjct: 529 EGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSST 588

Query: 418 IQLVAD 423
            Q++ D
Sbjct: 589 FQMLLD 594



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/425 (24%), Positives = 202/425 (47%), Gaps = 37/425 (8%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           RP+++ +   + ++ ++K++ S +SL ++++  G+  +    N +IN      +VD A+ 
Sbjct: 93  RPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVS 152

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +  KM   G                                    ++P+  T+N L+   
Sbjct: 153 VMGKMFKLG------------------------------------IQPDAITFNTLINGL 176

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C++  I+EA  +  +MV SG +P+ ++YNT+     + G T  A ++  +M+ N+ +PN 
Sbjct: 177 CNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNV 236

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   I+   CK+  + +A+ FL  M +  + P++V +N+++ GF  +   +   +    
Sbjct: 237 VTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKE 296

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M    V PD VTF+ ++D     G++ + + + + M + G EP+ + ++ L  GY    +
Sbjct: 297 MVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQ 356

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A  +L  M   G  PN+  +  +I+G+C + +M  A  +  +M E  + P+  TY T
Sbjct: 357 MDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYST 416

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
           L+ G  +  +P  A  L + M   G+ P      ++ D +   G   EA ++LK   E R
Sbjct: 417 LMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHE-R 475

Query: 446 QSMPN 450
           +  PN
Sbjct: 476 RIKPN 480



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 179/363 (49%), Gaps = 5/363 (1%)

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK--NVKPNDR 136
           ++D+A+  F +M     +P+   +   +   G++ K ++    + L +Q     V  N  
Sbjct: 76  SIDDALTSFYRMVRMNPRPSVVEFGKFL---GSIAKKKQYSSAVSLCNQMDLFGVTHNVY 132

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           + N+L+   C  + ++ A +V+ KM   GIQPDA+T+NTL       G+   A  +  EM
Sbjct: 133 SLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEM 192

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
             +   PN  +   +++G CK GN   A+R   +M++    PN+V +N++I      +  
Sbjct: 193 VWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLV 252

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           +   + L+ M + G+ PDVVT++TI+  + S G + +   +F +MV   + PD   F+IL
Sbjct: 253 NEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNIL 312

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G  + G   +A  +  +M + G  PN   +  ++ G+C   +M  A+ +   M   G 
Sbjct: 313 VDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGC 372

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            PNL +Y  L+ GY ++K+   A+ LL  M EK + P   T   +      +G  REA  
Sbjct: 373 APNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALN 432

Query: 437 VLK 439
           + K
Sbjct: 433 LFK 435



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 115/258 (44%), Gaps = 1/258 (0%)

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
            + M     RP+    G  +    K+     A+    +M    V  N+   N LI     
Sbjct: 84  FYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCR 143

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +   D     +  M + G++PD +TF+T+++   + G + +   +F++MV +G EP++  
Sbjct: 144 LSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVIS 203

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++ +  G  + G    A  +   M +    PNVV + T+I   C    +  A+    +M 
Sbjct: 204 YNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMV 263

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
           + GI P++ TY T+L G+    Q   A  L + M  + V P   T  ++ D     G+  
Sbjct: 264 DRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVS 323

Query: 433 EAKRVLKSAEEDRQSMPN 450
           EA+ V ++  E + + PN
Sbjct: 324 EARCVSETMTE-KGAEPN 340


>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 214/396 (54%), Gaps = 6/396 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLIT--YTTLVAALTRQKRFKSILSLISKVEKDGMK 61
           L  +G+   A   +  ++++GH  +  +   + +++ L R  + +  L + ++ +K G  
Sbjct: 172 LGNRGEWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFG 231

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVG-KPEESLK 120
            +   ++AM++A   SG   EA+K+FQ MK +GCKP   TYNT+I   G  G   +++L 
Sbjct: 232 NNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALD 291

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSI-EEAWNVVYKMVASGIQPDAVTYNTLARA 179
           + + M Q + V+P+  T+N L+ A CS+ S+ E++  V  +M   GI+ D  TYNTL  A
Sbjct: 292 IFEEM-QKEGVEPDRITFNSLI-AVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDA 349

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G+   A  ++  M+   + PN  T   ++ GY K G  E+A+   + MKE  V P+
Sbjct: 350 VCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPD 409

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            V +N+LI  +  +   D    A   ME  G+K DVVT++ ++DA+   G       +FD
Sbjct: 410 RVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFD 469

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            M   G+ P++  +S L   Y +AG  Q A SI    ++ G+ P+VV+++++I   C   
Sbjct: 470 KMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCG 529

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
            ++ A+ + ++M + GI PN+ TY +L+  YG   Q
Sbjct: 530 LVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQ 565



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 191/407 (46%), Gaps = 44/407 (10%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQK-RFKSILSLISKVEKDGMKPDSIL 66
           G+  EA  +F  + + G +P LITY T++ A  +     K  L +  +++K+G++PD I 
Sbjct: 248 GRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRIT 307

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           FN++I  CS     +++ ++F +M+  G +    TYNTLI      G+ E +  ++  M 
Sbjct: 308 FNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSM- 366

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + KN+ PN  TY+ ++  +      EEA  + + M  SG++PD V+YNTL   YA+ G  
Sbjct: 367 RLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRF 426

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A     +M+   ++ +  T   ++  Y K+G  +DA     +MK   + PN++ +++L
Sbjct: 427 DDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSAL 486

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I  +                +  G+KPDVV +S+++D+    GL+     +  +M +AGI
Sbjct: 487 IDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGI 546

Query: 307 EPDIHVFSILAKGYVRAGEPQKAE------------------------------------ 330
           +P+I  ++ L   Y R G+    E                                    
Sbjct: 547 QPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDRSTEIICKTLTSQQNANDHT 606

Query: 331 ------SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
                 S+   M+++G+ PNVV F+ +++       +Q A  + E+M
Sbjct: 607 GVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCSSLQEASVLLEQM 653



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 173/349 (49%), Gaps = 15/349 (4%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           ++  +F  +   G    + TY TL+ A+ +  + +   S++S +    + P+ + ++ MI
Sbjct: 323 DSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMI 382

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   + G  +EA+ ++  MK+SG +P   +YNTLI  Y  +G+ +++L   + M +   +
Sbjct: 383 DGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMER-VGL 441

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           K +  TYN L+ A+  +   ++A  +  KM A G+ P+ +TY+ L  AY++ G    A  
Sbjct: 442 KADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATS 501

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  E +   ++P+      ++   CK G +EDA+  L  M +  + PN+V +NSLI  + 
Sbjct: 502 IFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYG 561

Query: 252 DIKDSDGVDKA-----LTLMEEFGVKPDVV---TFSTIMDAWSSAGLMGKCQEIFDDMVK 303
                D V+ A     + +  + G +   +   T ++  +A    G++     +F +M +
Sbjct: 562 RNGQVDNVEAAKGNMPINVFNKVGDRSTEIICKTLTSQQNANDHTGVLAAV-SVFHEMQQ 620

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR-----KYGVHPNVVM 347
            G++P++  FS +     R    Q+A  +L  MR      YG+   ++M
Sbjct: 621 FGLKPNVVTFSAILNACSRCSSLQEASVLLEQMRFFDSWVYGIAHGLLM 669



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 167/379 (44%), Gaps = 41/379 (10%)

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           S L + MI+     G V+ A+ +F + + +G       Y+ ++  YG  G+  E+LK+ Q
Sbjct: 199 SKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQ 258

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIE--EAWNVVYKMVASGIQPDAVTYNTLARAYA 181
            M +    KPN  TYN ++ A C K  ++  +A ++  +M   G++PD +T+N+L  A  
Sbjct: 259 AMKK-AGCKPNLITYNTIIDA-CGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLI-AVC 315

Query: 182 QYGETYRAEQMLF-EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
             G  +   Q +F EMQ   +  +  T   ++   CK G ME A   +  M+   + PN 
Sbjct: 316 SRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPN- 374

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
                                             VVT+ST++D +   G   +   ++ D
Sbjct: 375 ----------------------------------VVTYSTMIDGYGKLGCFEEAIGLYHD 400

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M ++G+ PD   ++ L   Y + G    A +    M + G+  +VV +  +I  +    K
Sbjct: 401 MKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGK 460

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
            + A  +++KM   G+ PN+ TY  L+  Y +A     A  +    +  G++P       
Sbjct: 461 YKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSS 520

Query: 421 VADSWRAIGLAREAKRVLK 439
           + DS    GL  +A  +L+
Sbjct: 521 LIDSCCKCGLVEDAVVLLQ 539



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/340 (23%), Positives = 160/340 (47%), Gaps = 10/340 (2%)

Query: 105 LIKGYGNVGKPEESLKLLQLMSQDKNVKPN-DRTYNILVRAWCSKNSIEEAWNVVYKMVA 163
           L++  GN G+ E +L+  + M Q  +++    +  +I++        +E A +V  +   
Sbjct: 168 LLRELGNRGEWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQK 227

Query: 164 SGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEG-NME 222
           +G   +   Y+ +  AY + G    A ++   M+    +PN  T   I+    K G +++
Sbjct: 228 AGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLK 287

Query: 223 DAMRFLYRMKELEVHPNLVVFNSLI----KGFLDIKDSDGVDKALTLMEEFGVKPDVVTF 278
            A+     M++  V P+ + FNSLI    +G L  +DS    +    M+  G++ D+ T+
Sbjct: 288 KALDIFEEMQKEGVEPDRITFNSLIAVCSRGSL-WEDSQ---RVFAEMQRRGIEQDIFTY 343

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           +T++DA    G M     I   M    I P++  +S +  GY + G  ++A  +   M++
Sbjct: 344 NTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKE 403

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            GV P+ V + T+I  +    +   A++  + M  +G+  ++ TY  L+  YG+  +   
Sbjct: 404 SGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKD 463

Query: 399 AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           A  L   M+ +G+ P   T   + D++   G+ ++A  + 
Sbjct: 464 AAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIF 503



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 129/270 (47%), Gaps = 3/270 (1%)

Query: 176 LARAYAQYGETYRAEQML-FEMQNNQVRPN-ERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
           L R     GE  RA Q   + +Q   +R    +   I++S   + G +E A+    R ++
Sbjct: 168 LLRELGNRGEWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQK 227

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL-MG 292
                N+  +++++  +          K    M++ G KP+++T++TI+DA    G+ + 
Sbjct: 228 AGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLK 287

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           K  +IF++M K G+EPD   F+ L     R    + ++ +   M++ G+  ++  + T+I
Sbjct: 288 KALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLI 347

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
              C   +M+ A SI   M    I+PN+ TY T++ GYG+      A  L   M+E GVR
Sbjct: 348 DAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVR 407

Query: 413 PKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           P + +   + D +  +G   +A    K  E
Sbjct: 408 PDRVSYNTLIDIYAKLGRFDDALTACKDME 437


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 226/421 (53%), Gaps = 4/421 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P +++YTT++    ++       S   ++    + PD + ++++I A  +   +D+A
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKA 250

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD----KNVKPNDRTYN 139
           M++   M  +G  P   TY +++ GY + G+P+E++  L+ +  D      ++P+  TY 
Sbjct: 251 MEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYC 310

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L++ + +K ++     ++  MV +GI PD   YN L  AYA+ G+   A  +  +M+  
Sbjct: 311 TLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQ 370

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            + P+  T G ++   CK G +EDAM +  +M +  + P  +V+NSLI G       +  
Sbjct: 371 GLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 430

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
           ++ +  M + G+  + + F++I+D+    G + + +++FD MV+ G++PDI  +S L  G
Sbjct: 431 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDG 490

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y  AG+  +A  +L+ M   G+ PN V + T+I+G+C   +M  A+ ++++M   G++P+
Sbjct: 491 YCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPD 550

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + TY  +L G  + ++   A+EL   + E G + + ST  ++        L  +A R+ +
Sbjct: 551 IITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQ 610

Query: 440 S 440
           +
Sbjct: 611 N 611



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/484 (21%), Positives = 224/484 (46%), Gaps = 41/484 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   +A+  ++ +++    P ++TY++++AAL + +     + +++ + K+G+
Sbjct: 203 INGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGV 262

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPT-----TSTYNTLIKGYGNVGKP 115
            P+   + ++++    SG   EA+   +K++  G +P       +TY TL++GY   G  
Sbjct: 263 MPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGAL 322

Query: 116 EESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY-- 173
                LL LM ++  + P+   YNIL+ A+  +  ++EA  V  KM   G+ PDAVTY  
Sbjct: 323 VGMHALLDLMVRN-GIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGA 381

Query: 174 ---------------------------------NTLARAYAQYGETYRAEQMLFEMQNNQ 200
                                            N+L        +  RAE+++ EM +  
Sbjct: 382 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 441

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           +  N      I+  +CKEG + ++ +    M  + V P+++ +++LI G+      D   
Sbjct: 442 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAM 501

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           K L+ M   G+KP+ VT+ T+++ +     MG    +F +M  +G+ PDI  ++I+ +G 
Sbjct: 502 KLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGL 561

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            +      A+ +   + + G    +  +  ++ G C       A+ +++ +C + +    
Sbjct: 562 FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEA 621

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
           +T+  ++    +  +   A++L       G+ P   T +L+A++    GL  E  ++  S
Sbjct: 622 RTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLS 681

Query: 441 AEED 444
            E++
Sbjct: 682 MEDN 685



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 191/388 (49%), Gaps = 33/388 (8%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT+ TY  L+    R  R     + +  V K G + ++I F  ++          +AM I
Sbjct: 85  PTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 87  -FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK--NVKPNDRTYNILVR 143
             ++M +  C P   +   L+KG  +  + +E+L+L  +M+  +     P+  +Y  ++ 
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVIN 204

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +  +    +A++  ++M+   I PD VTY+++  A  +     +A ++L  M  N V P
Sbjct: 205 GFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMP 264

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N RT   I+ GYC  G  ++A+ FL +++                       SDGV    
Sbjct: 265 NCRTYTSIMHGYCSSGQPKEAIGFLKKVR-----------------------SDGV---- 297

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
              E  G++PD+ T+ T++  +++ G +     + D MV+ GI PD +V++IL   Y + 
Sbjct: 298 ---EPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQ 354

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+  +A  + + MR+ G++P+ V +  VI   C + +++ AM  +E+M + G++P    Y
Sbjct: 355 GKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 414

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGV 411
            +L+ G     +  RAEEL+  M ++G+
Sbjct: 415 NSLIHGLCTCNKWERAEELILEMLDRGI 442



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/417 (22%), Positives = 191/417 (45%), Gaps = 1/417 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG     H + + ++  G  P    Y  L+ A  +Q +    + + SK+ + G+ PD++ 
Sbjct: 319 KGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVT 378

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           + A+I    +SG V++AM  F++M D G  P    YN+LI G     K E + +L+  M 
Sbjct: 379 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM- 437

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            D+ +  N   +N ++ + C +  + E+  +   MV  G++PD +TY+TL   Y   G+ 
Sbjct: 438 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 497

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++L  M +  ++PN  T   +++GYCK   M DA+     M+   V P+++ +N +
Sbjct: 498 DEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNII 557

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           ++G    + +    +    + E G + ++ T++ I+       L      +F ++    +
Sbjct: 558 LQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDL 617

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           + +   F+I+    ++ G   +A+ +  +    G+ PN   +  +         ++    
Sbjct: 618 KLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQ 677

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           ++  M + G   +      ++    +  +  RA   L +++EK    + ST  L  D
Sbjct: 678 LFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 734



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 172/357 (48%), Gaps = 4/357 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + IL   G+  +A   F  +I+EG  P  I Y +L+  L    +++    LI ++   G+
Sbjct: 383 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 442

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             ++I FN++I++  + G V E+ K+F  M   G KP   TY+TLI GY   GK +E++K
Sbjct: 443 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMK 502

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M     +KPN  TY  L+  +C  + + +A  +  +M +SG+ PD +TYN + +  
Sbjct: 503 LLSGMVS-VGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGL 561

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q   T  A+++   +  +  +    T  II+ G CK    +DA+R    +  +++    
Sbjct: 562 FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEA 621

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FN +I   L +  +             G+ P+  T+  + +     GL+ +  ++F  
Sbjct: 622 RTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLS 681

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM--RKYGVHPNVV-MFTTVISG 354
           M   G   D  + + + +  ++ GE  +A + L+ +  + + +  +   +F  ++SG
Sbjct: 682 MEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG 738



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 135/296 (45%), Gaps = 9/296 (3%)

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA- 189
           V P   TY IL+   C  + ++  +  +  +V  G + +A+T+  L +       T  A 
Sbjct: 83  VTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE---VHPNLVVFNSL 246
           + +L  M      P+  +C I++ G C E   ++A+   + M +       P++V + ++
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTV 202

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I GF    DS         M +  + PDVVT+S+I+ A      M K  E+   MVK G+
Sbjct: 203 INGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGV 262

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV-----HPNVVMFTTVISGWCNAVKM 361
            P+   ++ +  GY  +G+P++A   L  +R  GV      P++  + T++ G+     +
Sbjct: 263 MPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGAL 322

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
               ++ + M   GI+P+   Y  L+  Y +  +   A  +   M ++G+ P   T
Sbjct: 323 VGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVT 378



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/290 (20%), Positives = 133/290 (45%), Gaps = 5/290 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  E+  +F+ ++  G +P +ITY+TL+       +    + L+S +   G+KP+++ 
Sbjct: 459 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 518

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +  +IN   +   + +A+ +F++M+ SG  P   TYN +++G     +   + K L +  
Sbjct: 519 YRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA-KELYVRI 577

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +   +    TYNI++   C     ++A  +   +    ++ +A T+N +  A  + G  
Sbjct: 578 TESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRN 637

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+ +     +N + PN  T  ++      +G +E+  +    M++     +  + N +
Sbjct: 638 GEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFI 697

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           ++  L   +       L++++E     +  T S  +D  S     GK QE
Sbjct: 698 VRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG----GKYQE 743


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 200/401 (49%), Gaps = 1/401 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +   +I++G +  ++TY+T++  L + +       ++  +   G+KPD + +N +I+
Sbjct: 218 AEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIID 277

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              ++  VD A  + Q M D G KP   TYNT+I G       + +  +LQ M  DK+VK
Sbjct: 278 GLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMI-DKDVK 336

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+ +TYN L+  + S    +E    + +M A G+ PD VTY+ L     + G+   A ++
Sbjct: 337 PDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKI 396

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
            + M    ++PN    GI++ GY   G + D    L  M    + PN  +FN ++  +  
Sbjct: 397 FYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAK 456

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
               D      + M + G+ PDVVT+  ++DA    G +      F+ M+  G+ P+  V
Sbjct: 457 KAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVV 516

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           F+ L  G       +KAE +   M   GV PNVV F T++   CN  ++  A  + + M 
Sbjct: 517 FNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSME 576

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            +G+ PN+ +Y TL+ G+  A +   A +LL VM   G++P
Sbjct: 577 RVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKP 617



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 201/412 (48%), Gaps = 3/412 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           RP L TY+ L     R  R +   +    + K G + + ++ N ++N   ++  VDEAM 
Sbjct: 87  RPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMD 146

Query: 86  IF-QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK--NVKPNDRTYNILV 142
           I  ++M + GC P   + NTL+KG  N  + EE+L+LL  M++D   N  PN  TYN ++
Sbjct: 147 ILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTII 206

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
              C   +++ A  V+  M+  G++ D VTY+T+     +     RAE +L  M +  V+
Sbjct: 207 DGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVK 266

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+  T   I+ G CK   ++ A   L  M +  V P++V +N++I G    +  D  D  
Sbjct: 267 PDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGV 326

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           L  M +  VKPD+ T++ ++  + S G   +     ++M   G++PD+  +S+L     +
Sbjct: 327 LQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCK 386

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G+  +A  I   M + G+ PNV ++  ++ G+     +     + + M   GI+PN   
Sbjct: 387 NGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYI 446

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           +  +L  Y +      A  +   M + G+ P   T  ++ D+   +G   +A
Sbjct: 447 FNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDA 498



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/462 (25%), Positives = 219/462 (47%), Gaps = 34/462 (7%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +   +I++G +P ++TY T++  L + +       ++  +   G+KPD + +N +I+
Sbjct: 253 AEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIID 312

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD---- 128
              ++  VD A  + Q M D   KP   TYN LI GY + G+ +E ++ L+ M       
Sbjct: 313 GLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDP 372

Query: 129 ------------------------------KNVKPNDRTYNILVRAWCSKNSIEEAWNVV 158
                                         K +KPN   Y IL+  + ++ +I +  +++
Sbjct: 373 DVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLL 432

Query: 159 YKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
             MVA+GI P+   +N +  AYA+      A  +   M  + + P+  T GI++   CK 
Sbjct: 433 DLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKL 492

Query: 219 GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTF 278
           G ++DA+    +M    V PN VVFNSL+ G   +   +  ++    M + GV+P+VV F
Sbjct: 493 GRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFF 552

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           +TIM    + G +   Q + D M + G+ P++  ++ L  G+  AG   +A  +L  M  
Sbjct: 553 NTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVS 612

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            G+ P+++ + T++ G+C   ++  A  ++ +M   G+ P   TY T+L G    ++   
Sbjct: 613 VGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSE 672

Query: 399 AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
           A+EL   M + G +    T  ++ +         EA ++ +S
Sbjct: 673 AKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQS 714



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 208/424 (49%), Gaps = 4/424 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG---MKPDSILFNAMINACSESG 78
           E G  P +++  TL+  L  +KR +  L L+  + +DG     P+ + +N +I+   ++ 
Sbjct: 154 EFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQ 213

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
            VD A  + Q M D G K    TY+T+I G       + +  +LQ M  DK VKP+  TY
Sbjct: 214 AVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMI-DKGVKPDVVTY 272

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           N ++   C   +++ A  V+  M+  G++PD VTYNT+     +     RA+ +L  M +
Sbjct: 273 NTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMID 332

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
             V+P+ +T   ++ GY   G  ++ +R L  M    + P++V ++ L+           
Sbjct: 333 KDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTE 392

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
             K    M   G+KP+V  +  ++  +++ G +    ++ D MV  GI P+ ++F+I+  
Sbjct: 393 ARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLC 452

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
            Y +     +A  I + M ++G+ P+VV +  +I   C   ++  A+  + +M   G+ P
Sbjct: 453 AYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTP 512

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           N   + +L++G     +  +AEEL   M ++GVRP       +  +    G    A+R++
Sbjct: 513 NSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLI 572

Query: 439 KSAE 442
            S E
Sbjct: 573 DSME 576



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 220/467 (47%), Gaps = 7/467 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   GK  EA  IF C+I +G +P +  Y  L+     +     +  L+  +  +G+
Sbjct: 381 LDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGI 440

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P++ +FN ++ A ++   +DEAM IF +M   G  P   TY  LI     +G+ ++++ 
Sbjct: 441 SPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVL 500

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M  D  V PN   +N LV   C+ +  E+A  + ++M   G++P+ V +NT+    
Sbjct: 501 KFNQMIND-GVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNL 559

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G+   A++++  M+   VRPN  +   ++ G+C  G  ++A + L  M  + + P+L
Sbjct: 560 CNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDL 619

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           + +++L++G+     +  +D A  L  E    GV P  VT+STI+          + +E+
Sbjct: 620 ISYDTLLRGYC---KTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKEL 676

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           + +M+K+G + DI+ ++I+  G  +     +A  I  S+    + PN++ FT +I     
Sbjct: 677 YLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFK 736

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             + + AM ++  +   G+ PN+ TY  ++    +       + L   ME+ G  P    
Sbjct: 737 GGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVM 796

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQ 464
           +  +  S    G    A   L   +E   S+      + +    R++
Sbjct: 797 LNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREE 843



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 106/459 (23%), Positives = 206/459 (44%), Gaps = 36/459 (7%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +I++  +P + TY  L+        +K ++  + ++   G+ PD + ++ +++   ++G 
Sbjct: 330 MIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGK 389

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             EA KIF  M   G KP  + Y  L+ GY   G   +   LL LM  +  + PN+  +N
Sbjct: 390 CTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVAN-GISPNNYIFN 448

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET------------- 186
           I++ A+  K  I+EA ++  +M   G+ PD VTY  L  A  + G               
Sbjct: 449 IVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMIND 508

Query: 187 ----------------------YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
                                  +AE++ FEM +  VRPN      I+   C EG +  A
Sbjct: 509 GVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVA 568

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
            R +  M+ + V PN++ +N+LI G      +D   + L +M   G+KPD++++ T++  
Sbjct: 569 QRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRG 628

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           +   G +     +F +M++ G+ P    +S + +G        +A+ +  +M K G   +
Sbjct: 629 YCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWD 688

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
           +  +  +++G C    +  A  I++ +C   + PN+ T+  ++    +  +   A +L  
Sbjct: 689 IYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFA 748

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            +   G+ P   T  ++  +    GL  E   +  + E+
Sbjct: 749 SIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEK 787


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 218/420 (51%), Gaps = 1/420 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L    +  EA  + + ++ +G +P L+TY  +V  L ++      LSL+ K+E+  ++P 
Sbjct: 196 LFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++N +I+A     NV++A+ +F +M + G +P   TYN+LI+   N G+  ++ +LL 
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + K + PN  T++ L+ A+  +  + EA  +  +M+   I PD  TY++L   +  +
Sbjct: 316 DMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                A+ M   M +    PN  T   ++ G+CK   +++ M     M +  +  N V +
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            +LI GF   ++ D        M   GV PD++T+S ++D   + G +     +F+ + +
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           + +EPDI+ ++I+ +G  +AG+ +    +  S+   GV PNVV +TT++SG+C     + 
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A +++ +M E G  P+  TY TL+  +        + EL++ M         STI LV +
Sbjct: 555 ADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTN 614



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 201/398 (50%), Gaps = 1/398 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++E G++P   T+ TL+  L R  R    ++L+ ++   G +PD + +  ++N   + G+
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D A+ + +KM+    +P    YNT+I    N     ++L L   M  +K ++PN  TYN
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM-DNKGIRPNVVTYN 295

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+R  C+     +A  ++  M+   I P+ VT++ L  A+ + G+   AE++  EM   
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            + P+  T   +++G+C    +++A      M   +  PN+V +N+LIKGF   K  D  
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            +    M + G+  + VT++T++  +  A      Q +F  MV  G+ PDI  +SIL  G
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
               G+ + A  +   +++  + P++  +  +I G C A K++    ++  +   G+ PN
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           + TY T++ G+        A+ L + M+E+G  P   T
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 213/425 (50%), Gaps = 1/425 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G+ P ++T  +L+       R    +SL+ ++ + G +PDS  FN +I+       
Sbjct: 142 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNR 201

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             EA+ +  +M   GC+P   TY  ++ G    G  + +L LL+ M Q K ++P    YN
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK-IEPGVVIYN 260

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++ A C+  ++ +A N+  +M   GI+P+ VTYN+L R    YG    A ++L +M   
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 320

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           ++ PN  T   ++  + KEG + +A +    M +  + P++  ++SLI GF      D  
Sbjct: 321 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 380

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
                LM      P+VVT++T++  +  A  + +  E+F +M + G+  +   ++ L  G
Sbjct: 381 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHG 440

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           + +A E   A+ +   M   GV P+++ ++ ++ G CN  K++ A+ ++E +    + P+
Sbjct: 441 FFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPD 500

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + TY  ++ G  +A +     +L   +  KGV+P   T   +   +   GL  EA  + +
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFR 560

Query: 440 SAEED 444
             +E+
Sbjct: 561 EMKEE 565



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 210/415 (50%), Gaps = 1/415 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  +A  +F  +++    P+++ ++ L++A+ +  +F  ++SL  +++  G+  +   ++
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +IN       +  A+ +  KM   G +P   T N+L+ G+ +  +  +++ L+  M + 
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE- 179

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
              +P+  T+N L+      N   EA  +V +MV  G QPD VTY  +     + G+   
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  +L +M+  ++ P       I+   C   N+ DA+     M    + PN+V +NSLI+
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
              +        + L+ M E  + P+VVTFS ++DA+   G + + ++++D+M+K  I+P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           DI  +S L  G+       +A+ +   M      PNVV + T+I G+C A ++   M ++
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
            +M + G+  N  TY TL+ G+ +A++   A+ + + M   GV P   T  ++ D
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 122/257 (47%), Gaps = 3/257 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++  V +GK  EA  +++ +I+    P + TY++L+       R      +   +     
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 392

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +N +I    ++  VDE M++F++M   G    T TY TLI G+    + + +  
Sbjct: 393 FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQI 452

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M  D  V P+  TY+IL+   C+   +E A  V   +  S ++PD  TYN +    
Sbjct: 453 VFKQMVSD-GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+      +   +    V+PN  T   ++SG+C++G  E+A      MKE    P+ 
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDS 571

Query: 241 VVFNSLIKGFLDIKDSD 257
             +N+LI+  L  +D D
Sbjct: 572 GTYNTLIRAHL--RDGD 586



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 124/300 (41%), Gaps = 36/300 (12%)

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           +++A N+   MV S   P  V ++ L  A A+  +      +  +MQN  +  N  T  I
Sbjct: 62  LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           +++ +C+   +  A+  L +M +L                                   G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKL-----------------------------------G 146

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
            +PD+VT +++++ +     +     +   MV+ G +PD   F+ L  G  R     +A 
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           +++  M   G  P++V +  V++G C    +  A+S+ +KM +  I P +  Y T++   
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
              K    A  L   M+ KG+RP   T   +       G   +A R+L    E R+  PN
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE-RKINPN 325


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 215/417 (51%), Gaps = 2/417 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSIL-SLISKVEKDGMKPDSILFNAMINACSESGNVD 81
            G  P +++Y  ++ A  R KR  S   ++  ++ +  + P+   +N +I     +GN+D
Sbjct: 163 HGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLD 222

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
            A++ F +M+  GC P   TYNTLI GY  + K ++  +LL+ M+  K ++PN  +YN++
Sbjct: 223 VALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMAL-KGLEPNLISYNVV 281

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +   C +  ++E   V+ +M   G   D VTYNTL + Y + G  ++A  M  EM  + +
Sbjct: 282 INGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            P+  T   ++   CK GNM  A  FL +M+   + PN   + +L+ GF      +   +
Sbjct: 342 SPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            L  M + G  P VVT++ +++    AG M     + +DM + G+ PD+  +S +  G+ 
Sbjct: 402 VLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFC 461

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           R+ +  +A  +   M   G+ P+ + ++++I G+C   + + A  ++++M  +G+ P+  
Sbjct: 462 RSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEF 521

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           TY  L+  Y       +A +L   M EKGV P   T  ++ +        REAKR+L
Sbjct: 522 TYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLL 578



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 196/395 (49%), Gaps = 2/395 (0%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESG-NVDEAMKIFQKM 90
           +  +V + +R       LS++   +  G  P  + +NA+++A   S  N+  A  +F++M
Sbjct: 137 FDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
             S   P   TYN LI+G+   G  + +L+    M + K   PN  TYN L+  +C    
Sbjct: 197 LQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRM-EKKGCLPNVVTYNTLIDGYCKLRK 255

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           I++ + ++  M   G++P+ ++YN +     + G       +L EM       +E T   
Sbjct: 256 IDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNT 315

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++ GYCKEGN   A+     M    + P+++ + SLI       + +   + L  M   G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRG 375

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           + P+  T++T++D +S  G M +   +  +M+  G  P +  ++ L  G+  AG+   A 
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAI 435

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           ++L  M++ G+ P+VV ++TV+SG+C +  +  A+ +  KM   GI P+  TY +L+ G+
Sbjct: 436 AVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGF 495

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            E ++   A +L   M   G+ P + T   + +++
Sbjct: 496 CEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAY 530



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 196/391 (50%), Gaps = 1/391 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F  +++    P + TY  L+            L    ++EK G  P+ + +N +I+
Sbjct: 189 AENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLID 248

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              +   +D+  ++ + M   G +P   +YN +I G    G+ +E   +L  M++ +   
Sbjct: 249 GYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNK-RGYS 307

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
            ++ TYN L++ +C + +  +A  +  +M+  G+ P  +TY +L  +  + G   RA + 
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEF 367

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           L +M+   + PNERT   +V G+ ++G M +A R L  M +    P++V +N+LI G   
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCI 427

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
                     L  M+E G+ PDVV++ST++  +  +  + +   +   MV  GI+PD   
Sbjct: 428 AGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTIT 487

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           +S L +G+      ++A  +   M + G+ P+   +T +I+ +C    +Q+A+ ++ +M 
Sbjct: 488 YSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMV 547

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           E G+ P++ TY  L+ G  +  +   A+ LL
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQARTREAKRLL 578



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/459 (23%), Positives = 217/459 (47%), Gaps = 16/459 (3%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  P LI+Y  ++  L R+ R K I  +++++ K G   D + +N +I    + GN  +
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQ 328

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+ +  +M   G  P+  TY +LI      G    + + L  M + + + PN+RTY  LV
Sbjct: 329 ALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQM-RVRGLCPNERTYTTLV 387

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
             +  K  + EA+ V+ +M+ +G  P  VTYN L   +   G+   A  +L +M+   + 
Sbjct: 388 DGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLT 447

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+  +   ++SG+C+  ++++A+R   +M    + P+ + ++SLI+GF + + +      
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDL 507

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              M   G+ PD  T++ +++A+   G + K  ++ ++MV+ G+ PD+  +S+L  G  +
Sbjct: 508 FDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNK 567

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVIS---------------GWCNAVKMQRAMSI 367
               ++A+ +L  +      P+ V + T+I                G+C    M  A  +
Sbjct: 568 QARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           +E M E    P+   Y  ++ G+       +A  L + M + G      T+  +  +   
Sbjct: 628 FESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHK 687

Query: 428 IGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNL 466
            G   E   V+ +     +    ++ ++ VE  HR+ N+
Sbjct: 688 EGKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGNM 726



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 120/496 (24%), Positives = 231/496 (46%), Gaps = 18/496 (3%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
            F+ + ++G  P ++TY TL+    + ++      L+  +   G++P+ I +N +IN   
Sbjct: 227 FFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLC 286

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
             G + E   +  +M   G      TYNTLIKGY   G   ++L +   M +   + P+ 
Sbjct: 287 REGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR-HGLSPSV 345

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY  L+ + C   ++  A   + +M   G+ P+  TY TL   ++Q G    A ++L E
Sbjct: 346 ITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKE 405

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M +N   P+  T   +++G+C  G M DA+  L  MKE  + P++V +++++ GF    D
Sbjct: 406 MIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYD 465

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D   +    M   G+KPD +T+S+++  +       +  ++FD+M++ G+ PD   ++ 
Sbjct: 466 VDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTA 525

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI-------- 367
           L   Y   G+ QKA  +   M + GV P+VV ++ +I+G     + + A  +        
Sbjct: 526 LINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEE 585

Query: 368 -------YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
                  Y  + E   N   K+  +L+ G+        A+++ + M EK  +P  +   +
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNV 645

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVV 480
           +       G  R+A  + K   +    +        V+++H++  ++  NS    +  + 
Sbjct: 646 MIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANV--LR 703

Query: 481 SSEHNGSSAAKIRSQI 496
           S E + +  AK+  +I
Sbjct: 704 SCELSEAEQAKVLVEI 719



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 184/350 (52%), Gaps = 18/350 (5%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  H+A  +   ++  G  P++ITYT+L+ ++ +          + ++   G+ P+   
Sbjct: 323 EGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERT 382

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +  +++  S+ G ++EA ++ ++M D+G  P+  TYN LI G+   GK  +++ +L+ M 
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDM- 441

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++K + P+  +Y+ ++  +C    ++EA  V  KMVA GI+PD +TY++L + + +   T
Sbjct: 442 KEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRT 501

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A  +  EM    + P+E T   +++ YC EG+++ A++    M E  V P++V ++ L
Sbjct: 502 KEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVL 561

Query: 247 IKGF-LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS---------------AGL 290
           I G     +  +     L L  E  V  D VT+ T+++  S+                G+
Sbjct: 562 INGLNKQARTREAKRLLLKLFYEESVPSD-VTYHTLIENCSNIEFKSVVSLIKGFCMKGM 620

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           M +  ++F+ M++   +PD   ++++  G+ R G+ +KA S+   M K G
Sbjct: 621 MTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSG 670



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 159/307 (51%), Gaps = 1/307 (0%)

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR-AEQMLFEM 196
           ++++V+++     I++A ++V+   A G  P  ++YN +  A  +       AE +  EM
Sbjct: 137 FDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
             +QV PN  T  I++ G+C  GN++ A+RF  RM++    PN+V +N+LI G+  ++  
Sbjct: 197 LQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKI 256

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           D   + L  M   G++P++++++ +++     G M +   +  +M K G   D   ++ L
Sbjct: 257 DDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTL 316

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
            KGY + G   +A  +   M ++G+ P+V+ +T++I   C A  M RA    ++M   G+
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGL 376

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            PN +TY TL+ G+ +      A  +L+ M + G  P   T   + +     G   +A  
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIA 436

Query: 437 VLKSAEE 443
           VL+  +E
Sbjct: 437 VLEDMKE 443



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 84/356 (23%), Positives = 168/356 (47%), Gaps = 22/356 (6%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG  +EA+ +   +I+ G  P+++TY  L+       +    ++++  +++ G+ PD + 
Sbjct: 393 KGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVS 452

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +++    S +VDEA+++ +KM   G KP T TY++LI+G+    + +E+  L   M 
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEML 512

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +   + P++ TY  L+ A+C +  +++A  +  +MV  G+ PD VTY+ L     +   T
Sbjct: 513 R-VGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQART 571

Query: 187 YRAEQMLFEMQNNQVRPNERT-------CGII--------VSGYCKEGNMEDAMRFLYRM 231
             A+++L ++   +  P++ T       C  I        + G+C +G M +A +    M
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 631

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSA 288
            E    P+   +N +I G     D   + KA +L +E    G     VT   ++      
Sbjct: 632 LEKNHKPDGTAYNVMIHGHCRGGD---IRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKE 688

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           G + +   +  +++++    +     +L +   R G       +L  M K G  PN
Sbjct: 689 GKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 195/382 (51%)

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           + G+ P+   +N ++ A    G ++EA+ +   M+ +GC P   TYNTL+  +   G+ +
Sbjct: 3   RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 62

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
            + +++ LM ++ N KPN  T+N +V   C    +E A  V  +MV  G+ PD V+YNTL
Sbjct: 63  GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 122

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
              Y + G  + +  +  EM    + P+  T   ++   CK GN+E A+  + +M+E  +
Sbjct: 123 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 182

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
             N V F +LI GF      D    A+  M + G++P VV ++ +++ +   G M   +E
Sbjct: 183 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE 242

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +  +M    ++PD+  +S +  GY + G    A  +   M K GV P+ + ++++I G C
Sbjct: 243 LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLC 302

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
              ++  A  ++E M ++G+ P+  TY TL+ G+ +     +A  L   M  KGV P   
Sbjct: 303 EEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVV 362

Query: 417 TIQLVADSWRAIGLAREAKRVL 438
           T  ++ +        +EA R+L
Sbjct: 363 TYSVLINGLSKSARTKEAHRLL 384



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 216/469 (46%), Gaps = 51/469 (10%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG-MKP 62
           L  +G+  EA  +   +   G  P  +TY TLVAA  R         ++S + ++G  KP
Sbjct: 20  LCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKP 79

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           + + FN+M+N   ++G ++ A K+F +M   G  P   +YNTL+ GY  VG   ESL + 
Sbjct: 80  NLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVF 139

Query: 123 QLMSQ----------------------------------DKNVKPNDRTYNILVRAWCSK 148
             M+Q                                  ++ ++ N+ T+  L+  +C K
Sbjct: 140 SEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKK 199

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
             +++A   V +M   GIQP  V YN L   Y + G    A +++ EM+  +V+P+  T 
Sbjct: 200 GFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTY 259

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             I+SGYCK GN++ A +   +M +  V P+ + ++SLI+G  + K  +   +    M +
Sbjct: 260 STIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ 319

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            GV+PD  T++T++D     G + K   + D+M++ G+ PD+  +S+L  G  ++   ++
Sbjct: 320 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 379

Query: 329 AESILTSMRKYGVHPNVVMF---------------TTVISGWCNAVKMQRAMSIYEKMCE 373
           A  +L  +      P+ + +                 ++ G+C    M+ A  +Y+ M +
Sbjct: 380 AHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLD 439

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK-STIQLV 421
                +   Y  L+ G+       +A    + M   G  P   STI LV
Sbjct: 440 RNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLV 488



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/422 (25%), Positives = 211/422 (50%), Gaps = 22/422 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+   A  +F+ ++ EG  P +++Y TL++   +       L++ S++ + G+
Sbjct: 88  VNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL 147

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + F ++I+A  ++GN+++A+ +  +M++ G +    T+  LI G+   G  +++L 
Sbjct: 148 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALL 207

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            ++ M +   ++P+   YN L+  +C    ++ A  ++ +M A  ++PD VTY+T+   Y
Sbjct: 208 AVEEMRK-CGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 266

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A Q+  +M    V P+  T   ++ G C+E  + DA      M +L V P+ 
Sbjct: 267 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 326

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             + +LI G    K+ + V+KAL+L +E    GV PDVVT+S +++  S +    +   +
Sbjct: 327 FTYTTLIDGH--CKEGN-VEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 383

Query: 298 F-----DDMVKAGIEPDIHVFSI----------LAKGYVRAGEPQKAESILTSMRKYGVH 342
                 +D V   I+ D  +             L KG+   G  ++A+ +  SM      
Sbjct: 384 LFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWK 443

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
            +  +++ +I G C    +++A+S +++M   G +PN  +  +L+ G  E      A+  
Sbjct: 444 LDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNA 503

Query: 403 LQ 404
           +Q
Sbjct: 504 IQ 505



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 138/270 (51%), Gaps = 1/270 (0%)

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           MV  G+ P+  TYN L RA    G    A  ++ +M+     PN  T   +V+ +C+ G 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 221 MEDAMRFLYRMKEL-EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
           ++ A R +  M+E     PNLV FNS++ G       +G  K    M   G+ PDVV+++
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
           T++  +   G + +   +F +M + G+ PD+  F+ L     +AG  ++A +++  MR+ 
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
           G+  N V FT +I G+C    +  A+   E+M + GI P++  Y  L+ GY +  +   A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
            EL++ ME K V+P   T   +   +  +G
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVG 270



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 139/253 (54%), Gaps = 5/253 (1%)

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M  + V PN  T  I+V   C  G +E+A+  +  M+     PN V +N+L+  F    +
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 256 SDGVDKALTLMEEFG-VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
            DG ++ ++LM E G  KP++VTF+++++    AG M   +++FD+MV+ G+ PD+  ++
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            L  GY + G   ++ ++ + M + G+ P+VV FT++I   C A  +++A+++  +M E 
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQV--MEEKGVRPKKSTIQLVADSWRAIGLAR 432
           G+  N  T+  L+ G+   K+ +  + LL V  M + G++P       + + +  +G   
Sbjct: 181 GLRMNEVTFTALIDGF--CKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 238

Query: 433 EAKRVLKSAEEDR 445
            A+ +++  E  R
Sbjct: 239 LARELIREMEAKR 251



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 111/244 (45%), Gaps = 16/244 (6%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           ++A  +F  +++ G +P   TYTTL+    ++   +  LSL  ++ + G+ PD + ++ +
Sbjct: 308 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 367

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTL---------------IKGYGNVGKP 115
           IN  S+S    EA ++  K+      P    Y+ L               +KG+   G  
Sbjct: 368 INGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLM 427

Query: 116 EESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
           +E+ K+ Q M  D+N K +   Y+IL+   C   ++ +A +   +M+ SG  P++ +  +
Sbjct: 428 KEADKVYQSM-LDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTIS 486

Query: 176 LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
           L R   + G    A+  + ++       +      ++    KEGN++  +  L  M    
Sbjct: 487 LVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDG 546

Query: 236 VHPN 239
           + P+
Sbjct: 547 LLPS 550


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 244/499 (48%), Gaps = 59/499 (11%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK-DG 59
           MN L  +G+  EA  + + ++E+G +PT ITY T+V  + ++    S L+L+ K+E+   
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSH 250

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + P+ ++++A+I++  + G   +A  +F +M++ G  P   TYN++I G+ + G+  ++ 
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +LLQ M + K + P+  TYN L+ A+  +    EA  +  +M+  GI P+ +TY+++   
Sbjct: 311 QLLQEMLERK-ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG 369

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + +      AE M + M      PN  T   ++ GYC    ++D M  L+ M E  +  +
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
              +N+LI GF  + D   ++ AL L++E    G+ PD+VT  T++D     G +    E
Sbjct: 430 TTTYNTLIHGFYLVGD---LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 297 IFDDMVKA-----------GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV---- 341
           +F  M K+           G+EPD+  ++IL  G +  G+  +AE +   M   G+    
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 342 -------------------------------HPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
                                           PNVV FTT+I+G+C A ++   + ++ +
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ-LVADSWRAIG 429
           M   GI  N  TY TL+ G+ +      A ++ Q M   GV P   TI+ ++   W    
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWS--- 663

Query: 430 LAREAKRVLKSAEEDRQSM 448
              E KR +   E+ + SM
Sbjct: 664 -KEELKRAVAMLEKLQMSM 681



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 211/438 (48%), Gaps = 2/438 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F+ ++     P+++ +  L+  + R +R   ++SL  K+E+  ++ D   F  +I
Sbjct: 62  DAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILI 121

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                   +  A+  F K+   G  P   T+NTL+ G     +  E+L L   M +    
Sbjct: 122 KCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE-TTC 180

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +PN  T+  L+   C +  I EA  ++ +M+  G+QP  +TY T+     + G+T  A  
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 192 MLFEMQN-NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           +L +M+  + + PN      I+   CK+G   DA      M+E  + P+L  +NS+I GF
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
                    ++ L  M E  + PDVVT++ +++A+   G   + +E++D+M+  GI P+ 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             +S +  G+ +      AE +   M   G  PN++ F T+I G+C A ++   M +  +
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M E G+  +  TY TL+ G+        A +LLQ M   G+ P   T   + D     G 
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 431 AREAKRVLKSAEEDRQSM 448
            ++A  + K  ++ ++ +
Sbjct: 481 LKDALEMFKVMQKSKKDL 498



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 211/439 (48%), Gaps = 18/439 (4%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P ++T+ TL+  L  + R    L+L  ++ +   +P+ + F  ++N     G + EA
Sbjct: 144 GLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA 203

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +  +M + G +PT  TY T++ G    G    +L LL+ M +  ++ PN   Y+ ++ 
Sbjct: 204 VALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIID 263

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C      +A N+  +M   GI PD  TYN++   +   G    AEQ+L EM   ++ P
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   +++ + KEG   +A      M    + PN + ++S+I GF      D  +   
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF 383

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            LM   G  P+++TF+T++D +  A  +    E+  +M + G+  D   ++ L  G+   
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI--------- 374
           G+   A  +L  M   G+ P++V   T++ G C+  K++ A+ +++ M +          
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503

Query: 375 --GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
             G+ P+++TY  L+ G     +   AEEL + M  +G+ P   T   + D     GL +
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID-----GLCK 558

Query: 433 EAKRVLKSAEEDRQSMPNK 451
           +++  L  A +   SM +K
Sbjct: 559 QSR--LDEATQMFDSMGSK 575



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 169/351 (48%), Gaps = 2/351 (0%)

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           E   +++A+ +F  M  S   P+   +  L+     + +P+  + L Q M + K ++ + 
Sbjct: 56  EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMER-KQIRCDI 114

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            ++ IL++ +CS + +  A +   K+   G+ PD VT+NTL            A  +  +
Sbjct: 115 YSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQ 174

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M     RPN  T   +++G C+EG + +A+  L RM E  + P  + + +++ G     D
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234

Query: 256 SDGVDKALTLMEEFG-VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           +      L  MEE   + P+VV +S I+D+    G     Q +F +M + GI PD+  ++
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            +  G+  +G    AE +L  M +  + P+VV +  +I+ +    K   A  +Y++M   
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           GI PN  TY +++ G+ +  +   AE +  +M  KG  P   T   + D +
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGY 405



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 6/208 (2%)

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           L  GF +IK   G++ A+ L  +       P VV F  +M              ++  M 
Sbjct: 50  LQSGFHEIK---GLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKME 106

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           +  I  DI+ F+IL K +    +   A S    + K G+HP+VV F T++ G C   ++ 
Sbjct: 107 RKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVS 166

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A++++ +M E    PN+ T+ TL+ G     +   A  LL  M E G++P + T   + 
Sbjct: 167 EALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226

Query: 423 DSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           D     G    A  +L+  EE    +PN
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPN 254



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 105/232 (45%), Gaps = 1/232 (0%)

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           SG+ +   +EDA+     M      P++V F  L+   + ++  D V      ME   ++
Sbjct: 52  SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            D+ +F+ ++  + S   +      F  + K G+ PD+  F+ L  G        +A ++
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNL 171

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              M +    PNVV FTT+++G C   ++  A+++ ++M E G+ P   TY T++ G  +
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 393 AKQPWRAEELLQVMEE-KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
                 A  LL+ MEE   + P       + DS    G   +A+ +    +E
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 244/499 (48%), Gaps = 59/499 (11%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK-DG 59
           MN L  +G+  EA  + + ++E+G +PT ITY T+V  + ++    S L+L+ K+E+   
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSH 250

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + P+ ++++A+I++  + G   +A  +F +M++ G  P   TYN++I G+ + G+  ++ 
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +LLQ M + K + P+  TYN L+ A+  +    EA  +  +M+  GI P+ +TY+++   
Sbjct: 311 QLLQEMLERK-ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG 369

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + +      AE M + M      PN  T   ++ GYC    ++D M  L+ M E  +  +
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
              +N+LI GF  + D   ++ AL L++E    G+ PD+VT  T++D     G +    E
Sbjct: 430 TTTYNTLIHGFYLVGD---LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 297 IFDDMVKA-----------GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV---- 341
           +F  M K+           G+EPD+  ++IL  G +  G+  +AE +   M   G+    
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 342 -------------------------------HPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
                                           PNVV FTT+I+G+C A ++   + ++ +
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ-LVADSWRAIG 429
           M   GI  N  TY TL+ G+ +      A ++ Q M   GV P   TI+ ++   W    
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWS--- 663

Query: 430 LAREAKRVLKSAEEDRQSM 448
              E KR +   E+ + SM
Sbjct: 664 -KEELKRAVAMLEKLQMSM 681



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 210/438 (47%), Gaps = 2/438 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F+ ++     P+++ +  L+  + R +R   ++SL  K+E+  ++ D   FN +I
Sbjct: 62  DAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILI 121

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                   +  A+  F K+   G  P   T+ TL+ G     +  E+L     M +    
Sbjct: 122 KCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFE-TTC 180

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +PN  T+  L+   C +  I EA  ++ +M+  G+QP  +TY T+     + G+T  A  
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 192 MLFEMQN-NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           +L +M+  + + PN      I+   CK+G   DA      M+E  + P+L  +NS+I GF
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
                    ++ L  M E  + PDVVT++ +++A+   G   + +E++D+M+  GI P+ 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             +S +  G+ +      AE +   M   G  PN++ F T+I G+C A ++   M +  +
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M E G+  +  TY TL+ G+        A +LLQ M   G+ P   T   + D     G 
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 431 AREAKRVLKSAEEDRQSM 448
            ++A  + K  ++ ++ +
Sbjct: 481 LKDALEMFKVMQKSKKDL 498



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 210/439 (47%), Gaps = 18/439 (4%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P ++T+TTL+  L  + R    L    ++ +   +P+ + F  ++N     G + EA
Sbjct: 144 GLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA 203

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +  +M + G +PT  TY T++ G    G    +L LL+ M +  ++ PN   Y+ ++ 
Sbjct: 204 VALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIID 263

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C      +A N+  +M   GI PD  TYN++   +   G    AEQ+L EM   ++ P
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   +++ + KEG   +A      M    + PN + ++S+I GF      D  +   
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF 383

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            LM   G  P+++TF+T++D +  A  +    E+  +M + G+  D   ++ L  G+   
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI--------- 374
           G+   A  +L  M   G+ P++V   T++ G C+  K++ A+ +++ M +          
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503

Query: 375 --GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
             G+ P+++TY  L+ G     +   AEEL + M  +G+ P   T   + D     GL +
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID-----GLCK 558

Query: 433 EAKRVLKSAEEDRQSMPNK 451
           +++  L  A +   SM +K
Sbjct: 559 QSR--LDEATQMFDSMGSK 575



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 99/399 (24%), Positives = 199/399 (49%), Gaps = 4/399 (1%)

Query: 43  KRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTY 102
           K  +  + L S + +    P  + F  ++         D  + ++QKM+    +    ++
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 103 NTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV 162
           N LIK + +  K   +L     +++   + P+  T+  L+   C ++ + EA +  ++M 
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITK-LGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176

Query: 163 ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNME 222
            +  +P+ VT+ TL     + G    A  +L  M  + ++P + T G IV G CK+G+  
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 223 DAMRFLYRMKEL-EVHPNLVVFNSLIKGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFST 280
            A+  L +M+E+  + PN+V+++++I     D + SD      T M+E G+ PD+ T+++
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDA-QNLFTEMQEKGIFPDLFTYNS 295

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++  + S+G     +++  +M++  I PD+  ++ L   +V+ G+  +AE +   M   G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
           + PN + ++++I G+C   ++  A  ++  M   G +PNL T+ TL+ GY  AK+     
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           ELL  M E G+    +T   +   +  +G    A  +L+
Sbjct: 416 ELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 168/351 (47%), Gaps = 2/351 (0%)

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           E   +++A+ +F  M  S   P+   +  L+     + +P+  + L Q M + K ++ + 
Sbjct: 56  EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMER-KQIRCDI 114

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            ++NIL++ +CS + +  A +   K+   G+ PD VT+ TL            A     +
Sbjct: 115 YSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQ 174

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M     RPN  T   +++G C+EG + +A+  L RM E  + P  + + +++ G     D
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234

Query: 256 SDGVDKALTLMEEFG-VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           +      L  MEE   + P+VV +S I+D+    G     Q +F +M + GI PD+  ++
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            +  G+  +G    AE +L  M +  + P+VV +  +I+ +    K   A  +Y++M   
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           GI PN  TY +++ G+ +  +   AE +  +M  KG  P   T   + D +
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGY 405



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 6/208 (2%)

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           L  GF +IK   G++ A+ L  +       P VV F  +M              ++  M 
Sbjct: 50  LQSGFHEIK---GLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKME 106

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           +  I  DI+ F+IL K +    +   A S    + K G+HP+VV FTT++ G C   ++ 
Sbjct: 107 RKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVS 166

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A+  + +M E    PN+ T+ TL+ G     +   A  LL  M E G++P + T   + 
Sbjct: 167 EALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226

Query: 423 DSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           D     G    A  +L+  EE    +PN
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPN 254



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 103/232 (44%), Gaps = 1/232 (0%)

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           SG+ +   +EDA+     M      P++V F  L+   + ++  D V      ME   ++
Sbjct: 52  SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            D+ +F+ ++  + S   +      F  + K G+ PD+  F+ L  G        +A   
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDF 171

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              M +    PNVV FTT+++G C   ++  A+++ ++M E G+ P   TY T++ G  +
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 393 AKQPWRAEELLQVMEE-KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
                 A  LL+ MEE   + P       + DS    G   +A+ +    +E
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 244/499 (48%), Gaps = 59/499 (11%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK-DG 59
           MN L  +G+  EA  + + ++E+G +PT ITY T+V  + ++    S L+L+ K+E+   
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSH 250

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + P+ ++++A+I++  + G   +A  +F +M++ G  P   TYN++I G+ + G+  ++ 
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +LLQ M + K + P+  TYN L+ A+  +    EA  +  +M+  GI P+ +TY+++   
Sbjct: 311 QLLQEMLERK-ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG 369

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + +      AE M + M      PN  T   ++ GYC    ++D M  L+ M E  +  +
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
              +N+LI GF  + D   ++ AL L++E    G+ PD+VT  T++D     G +    E
Sbjct: 430 TTTYNTLIHGFYLVGD---LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 297 IFDDMVKA-----------GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV---- 341
           +F  M K+           G+EPD+  ++IL  G +  G+  +AE +   M   G+    
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 342 -------------------------------HPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
                                           PNVV FTT+I+G+C A ++   + ++ +
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ-LVADSWRAIG 429
           M   GI  N  TY TL+ G+ +      A ++ Q M   GV P   TI+ ++   W    
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWS--- 663

Query: 430 LAREAKRVLKSAEEDRQSM 448
              E KR +   E+ + SM
Sbjct: 664 -KEELKRAVAMLEKLQMSM 681



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 211/438 (48%), Gaps = 2/438 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F+ ++     P+++ +  L+  + R +R   ++SL  K+E+  ++ D   F  +I
Sbjct: 62  DAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILI 121

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                   +  A+  F K+   G  P   T+NTL+ G     +  E+L L   M +    
Sbjct: 122 KCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE-TTC 180

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +PN  T+  L+   C +  I EA  ++ +M+  G+QP  +TY T+     + G+T  A  
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 192 MLFEMQN-NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           +L +M+  + + PN      I+   CK+G   DA      M+E  + P+L  +NS+I GF
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
                    ++ L  M E  + PDVVT++ +++A+   G   + +E++D+M+  GI P+ 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             +S +  G+ +      AE +   M   G  PN++ F T+I G+C A ++   M +  +
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M E G+  +  TY TL+ G+        A +LLQ M   G+ P   T   + D     G 
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 431 AREAKRVLKSAEEDRQSM 448
            ++A  + K  ++ ++ +
Sbjct: 481 LKDALEMFKVMQKSKKDL 498



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 214/446 (47%), Gaps = 18/446 (4%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           F  L + G  P ++T+ TL+  L  + R    L+L  ++ +   +P+ + F  ++N    
Sbjct: 137 FGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
            G + EA+ +  +M + G +PT  TY T++ G    G    +L LL+ M +  ++ PN  
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
            Y+ ++ + C      +A N+  +M   GI PD  TYN++   +   G    AEQ+L EM
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
              ++ P+  T   +++ + KEG   +A      M    + PN + ++S+I GF      
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           D  +    LM   G  P+++TF+T++D +  A  +    E+  +M + G+  D   ++ L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI-- 374
             G+   G+   A  +L  M   G+ P++V   T++ G C+  K++ A+ +++ M +   
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 375 ---------GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
                    G+ P+++TY  L+ G     +   AEEL + M  +G+ P   T   + D  
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID-- 554

Query: 426 RAIGLAREAKRVLKSAEEDRQSMPNK 451
              GL ++++  L  A +   SM +K
Sbjct: 555 ---GLCKQSR--LDEATQMFDSMGSK 575



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 169/351 (48%), Gaps = 2/351 (0%)

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           E   +++A+ +F  M  S   P+   +  L+     + +P+  + L Q M + K ++ + 
Sbjct: 56  EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMER-KQIRCDI 114

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            ++ IL++ +CS + +  A +   K+   G+ PD VT+NTL            A  +  +
Sbjct: 115 YSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQ 174

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M     RPN  T   +++G C+EG + +A+  L RM E  + P  + + +++ G     D
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234

Query: 256 SDGVDKALTLMEEFG-VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           +      L  MEE   + P+VV +S I+D+    G     Q +F +M + GI PD+  ++
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            +  G+  +G    AE +L  M +  + P+VV +  +I+ +    K   A  +Y++M   
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           GI PN  TY +++ G+ +  +   AE +  +M  KG  P   T   + D +
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGY 405



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 6/208 (2%)

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           L  GF +IK   G++ A+ L  +       P VV F  +M              ++  M 
Sbjct: 50  LQSGFHEIK---GLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKME 106

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           +  I  DI+ F+IL K +    +   A S    + K G+HP+VV F T++ G C   ++ 
Sbjct: 107 RKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVS 166

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A++++ +M E    PN+ T+ TL+ G     +   A  LL  M E G++P + T   + 
Sbjct: 167 EALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226

Query: 423 DSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           D     G    A  +L+  EE    +PN
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPN 254



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 105/232 (45%), Gaps = 1/232 (0%)

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           SG+ +   +EDA+     M      P++V F  L+   + ++  D V      ME   ++
Sbjct: 52  SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            D+ +F+ ++  + S   +      F  + K G+ PD+  F+ L  G        +A ++
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNL 171

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              M +    PNVV FTT+++G C   ++  A+++ ++M E G+ P   TY T++ G  +
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 393 AKQPWRAEELLQVMEE-KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
                 A  LL+ MEE   + P       + DS    G   +A+ +    +E
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 244/499 (48%), Gaps = 59/499 (11%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK-DG 59
           MN L  +G+  EA  + + ++E+G +PT ITY T+V  + ++    S L+L+ K+E+   
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSH 250

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + P+ ++++A+I++  + G   +A  +F +M++ G  P   TYN++I G+ + G+  ++ 
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +LLQ M + K + P+  TYN L+ A+  +    EA  +  +M+  GI P+ +TY+++   
Sbjct: 311 QLLQEMLERK-ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG 369

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + +      AE M + M      PN  T   ++ GYC    ++D M  L+ M E  +  +
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
              +N+LI GF  + D   ++ AL L++E    G+ PD+VT  T++D     G +    E
Sbjct: 430 TTTYNTLIHGFYLVGD---LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 297 IFDDMVKA-----------GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV---- 341
           +F  M K+           G+EPD+  ++IL  G +  G+  +AE +   M   G+    
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 342 -------------------------------HPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
                                           PNVV FTT+I+G+C A ++   + ++ +
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ-LVADSWRAIG 429
           M   GI  N  TY TL+ G+ +      A ++ Q M   GV P   TI+ ++   W    
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWS--- 663

Query: 430 LAREAKRVLKSAEEDRQSM 448
              E KR +   E+ + SM
Sbjct: 664 -KEELKRAVAMLEKLQMSM 681



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 211/438 (48%), Gaps = 2/438 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F+ ++     P+++ +  L+  + R +R   ++SL  K+E+  ++ D   FN +I
Sbjct: 62  DAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILI 121

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                   +  A+  F K+   G  P   T+ TL+ G     +  E+L L   M +    
Sbjct: 122 KCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFE-TTC 180

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +PN  T+  L+   C +  I EA  ++ +M+  G+QP  +TY T+     + G+T  A  
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 192 MLFEMQN-NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           +L +M+  + + PN      I+   CK+G   DA      M+E  + P+L  +NS+I GF
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
                    ++ L  M E  + PDVVT++ +++A+   G   + +E++D+M+  GI P+ 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             +S +  G+ +      AE +   M   G  PN++ F T+I G+C A ++   M +  +
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M E G+  +  TY TL+ G+        A +LLQ M   G+ P   T   + D     G 
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 431 AREAKRVLKSAEEDRQSM 448
            ++A  + K  ++ ++ +
Sbjct: 481 LKDALEMFKVMQKSKKDL 498



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 212/439 (48%), Gaps = 18/439 (4%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P ++T+TTL+  L  + R    L+L  ++ +   +P+ + F  ++N     G + EA
Sbjct: 144 GLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA 203

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +  +M + G +PT  TY T++ G    G    +L LL+ M +  ++ PN   Y+ ++ 
Sbjct: 204 VALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIID 263

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C      +A N+  +M   GI PD  TYN++   +   G    AEQ+L EM   ++ P
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   +++ + KEG   +A      M    + PN + ++S+I GF      D  +   
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF 383

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            LM   G  P+++TF+T++D +  A  +    E+  +M + G+  D   ++ L  G+   
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI--------- 374
           G+   A  +L  M   G+ P++V   T++ G C+  K++ A+ +++ M +          
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503

Query: 375 --GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
             G+ P+++TY  L+ G     +   AEEL + M  +G+ P   T   + D     GL +
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID-----GLCK 558

Query: 433 EAKRVLKSAEEDRQSMPNK 451
           +++  L  A +   SM +K
Sbjct: 559 QSR--LDEATQMFDSMGSK 575



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 200/399 (50%), Gaps = 4/399 (1%)

Query: 43  KRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTY 102
           K  +  + L S + +    P  + F  ++         D  + ++QKM+    +    ++
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 103 NTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV 162
           N LIK + +  K   +L     +++   + P+  T+  L+   C ++ + EA N+ ++M 
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITK-LGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMF 176

Query: 163 ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNME 222
            +  +P+ VT+ TL     + G    A  +L  M  + ++P + T G IV G CK+G+  
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 223 DAMRFLYRMKEL-EVHPNLVVFNSLIKGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFST 280
            A+  L +M+E+  + PN+V+++++I     D + SD      T M+E G+ PD+ T+++
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDA-QNLFTEMQEKGIFPDLFTYNS 295

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++  + S+G     +++  +M++  I PD+  ++ L   +V+ G+  +AE +   M   G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
           + PN + ++++I G+C   ++  A  ++  M   G +PNL T+ TL+ GY  AK+     
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           ELL  M E G+    +T   +   +  +G    A  +L+
Sbjct: 416 ELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 169/351 (48%), Gaps = 2/351 (0%)

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           E   +++A+ +F  M  S   P+   +  L+     + +P+  + L Q M + K ++ + 
Sbjct: 56  EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMER-KQIRCDI 114

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            ++NIL++ +CS + +  A +   K+   G+ PD VT+ TL            A  +  +
Sbjct: 115 YSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQ 174

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M     RPN  T   +++G C+EG + +A+  L RM E  + P  + + +++ G     D
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234

Query: 256 SDGVDKALTLMEEFG-VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           +      L  MEE   + P+VV +S I+D+    G     Q +F +M + GI PD+  ++
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            +  G+  +G    AE +L  M +  + P+VV +  +I+ +    K   A  +Y++M   
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           GI PN  TY +++ G+ +  +   AE +  +M  KG  P   T   + D +
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGY 405



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 6/208 (2%)

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           L  GF +IK   G++ A+ L  +       P VV F  +M              ++  M 
Sbjct: 50  LQSGFHEIK---GLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKME 106

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           +  I  DI+ F+IL K +    +   A S    + K G+HP+VV FTT++ G C   ++ 
Sbjct: 107 RKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVS 166

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A++++ +M E    PN+ T+ TL+ G     +   A  LL  M E G++P + T   + 
Sbjct: 167 EALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226

Query: 423 DSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           D     G    A  +L+  EE    +PN
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPN 254



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 105/232 (45%), Gaps = 1/232 (0%)

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           SG+ +   +EDA+     M      P++V F  L+   + ++  D V      ME   ++
Sbjct: 52  SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            D+ +F+ ++  + S   +      F  + K G+ PD+  F+ L  G        +A ++
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNL 171

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              M +    PNVV FTT+++G C   ++  A+++ ++M E G+ P   TY T++ G  +
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 393 AKQPWRAEELLQVMEE-KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
                 A  LL+ MEE   + P       + DS    G   +A+ +    +E
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 206/422 (48%), Gaps = 10/422 (2%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           ++  L + ++    ++L  ++    + PD + + A+I+   +   V EA  +F++ +  G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
           C PT  TYNT+I G    G+ E +L L   M+     +P   TY+ L+   C  + +++ 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
             ++ +M   G  P+AVTYNTL  A    G +  A  +L +M  N   P   T G+I+ G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 215 YCKEGNMEDAMRFLYRMKELE--VHPNLVVFNSLIKGFLD---IKDSDGV-DKALTLMEE 268
            CKEG +E A R +  M  +E  + P+++ FNS++ G      I D+  V  +AL    E
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRAL----E 236

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G +P+VVT+ST++D  S    M +  ++   MV+ G   +   +S +  G ++ G  + 
Sbjct: 237 RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMED 296

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  +L  MR  G  P+ V + T+I G+    +++ A+ +  +M E G +P++ TY TL  
Sbjct: 297 AVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCH 356

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSM 448
           G   + +   A E+L  M  +G  P   T   + D     G   EA    +    D    
Sbjct: 357 GLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVA 416

Query: 449 PN 450
           P+
Sbjct: 417 PH 418



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 201/408 (49%), Gaps = 8/408 (1%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
           I  G RPT++TY+TL+  L R         L+ ++   G  P+++ +N ++NA    G  
Sbjct: 93  IHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRS 152

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-QLMSQDKNVKPNDRTYN 139
            EA  + ++M  +GC P   T+  +IKG    G+ E + +++ ++   +  + P+  T+N
Sbjct: 153 KEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFN 212

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++   C +  I +A NV  + +  G +P+ VTY+TL    ++  +   A Q+L +M   
Sbjct: 213 SVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVEL 272

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD---IKDS 256
             R N  T   +V G  K G MEDA+  L +M++    P+ V +N+LI GF     ++++
Sbjct: 273 GCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREA 332

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
            G+   L  M E G  P VVT++T+      +G   +  EI D M   G  P+   +S +
Sbjct: 333 VGL---LREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSI 389

Query: 317 AKGYVRAGEPQKAESILTSM-RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
             G  +AG   +A      M R   V P+V+ ++ +I G C A K+  A    E+M   G
Sbjct: 390 VDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAG 449

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
             P++ T+  L+ G  +A +     EL + M E+G  P   T   + D
Sbjct: 450 RIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVD 497



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 202/408 (49%), Gaps = 10/408 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE--KD 58
           +N L+G+G+  EA  +   +   G  P LIT+  ++  L ++   ++   ++ ++   + 
Sbjct: 143 VNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIES 202

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+ PD I FN++++   +   + +A  +F++  + GC+P   TY+TLI G   + K +E+
Sbjct: 203 GLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEA 262

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           L+LL  M +    + N  TY+ +V        +E+A  V+ +M  +G  PDAVTYNTL  
Sbjct: 263 LQLLAKMVE-LGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLID 321

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            + +      A  +L EM      P+  T   +  G C+ G  ++A+  L  M      P
Sbjct: 322 GFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAP 381

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG----VKPDVVTFSTIMDAWSSAGLMGKC 294
           N + ++S++ G      +  V +AL   E+      V P V+ +S ++D    AG + + 
Sbjct: 382 NAITYSSIVDGLCK---AGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEA 438

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
            E  + M++AG  PD+  FSIL  G   AG       +   M + G  P++V + T++  
Sbjct: 439 YEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDR 498

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
            C A ++  A  ++++M   G++P+  T  T++ G  E  +   A+ +
Sbjct: 499 LCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRI 546



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 208/430 (48%), Gaps = 8/430 (1%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  +A  +F  ++++   P ++TY  L+  L +Q+R K    L  +    G  P  + +N
Sbjct: 10  KVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYN 69

Query: 69  AMINACSESGNVDEAMKIFQKMK-DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            MI+   + G ++ A+ ++  M    G +PT  TY+TLI G     + ++  KLL+ M+ 
Sbjct: 70  TMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAG 129

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            +   PN  TYN LV A   +   +EA++++ +M A+G  P+ +T+  + +   + GE  
Sbjct: 130 -RGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIE 188

Query: 188 RAEQMLFE--MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
            A +++ E  M  + + P+  T   ++ G CKE  + DA     R  E    PN+V +++
Sbjct: 189 AAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYST 248

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           LI G   +   D   + L  M E G + + VT+ST++D     G M     +   M  AG
Sbjct: 249 LIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAG 308

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
             PD   ++ L  G+ +    ++A  +L  M + G HP+VV +TT+  G C + +   A+
Sbjct: 309 CLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAV 368

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            I + M   G  PN  TY +++ G  +A    R  E L    EK  R +     ++A S 
Sbjct: 369 EILDYMAARGCAPNAITYSSIVDGLCKA---GRVTEALGYF-EKMARDEVVAPHVIAYSA 424

Query: 426 RAIGLAREAK 435
              GL +  K
Sbjct: 425 LIDGLCKAGK 434


>gi|308810923|ref|XP_003082770.1| leaf protein (ISS) [Ostreococcus tauri]
 gi|116061239|emb|CAL56627.1| leaf protein (ISS) [Ostreococcus tauri]
          Length = 807

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 200/386 (51%), Gaps = 39/386 (10%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L  +GHRPT  T+T ++A L    R    LS++  +E+ G + D  ++NA+ +A   SG+
Sbjct: 121 LARDGHRPTRKTFTAVIATLGGMGRATETLSVVPMIEEYGDEADVAVWNAVAHAHCASGD 180

Query: 80  VDEAMKIFQKMK-DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
             EA +I  +M  + G   + +T+  +I  Y   G+   + +L++ MS +  V P++R Y
Sbjct: 181 PVEAERIADRMAAEGGVGVSGATHPEIIYTYARYGEANRAYRLIRRMSNEHGVIPDERHY 240

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           N  +R  C ++ +EEA  V+ +                          +  E+   E Q+
Sbjct: 241 NAFLRGLCERDDLEEADEVLRR--------------------------WNNEKFDLERQS 274

Query: 199 NQ----VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL--- 251
           ++     +P+  + G+++  + + GNM  A + L +M+   + P+L +FN LI G+L   
Sbjct: 275 DRGGRVSKPSAASYGLLIDAWARRGNMLAARKLLQQMQWERIAPSLQLFNILIGGYLKQG 334

Query: 252 DIKDSDGVDKALTL-----MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +I  ++G+ + L       ME  G++PD VT++  +D W+S G +  C+ IFD M +  +
Sbjct: 335 NIGAAEGLFRELESSGTWDMESLGIRPDNVTYTLFLDYWASQGQVDACERIFDRMARKKV 394

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
             D+  F  L K Y RA +P  AE +L  +    V P+V +++ VI+ +C   +M+RA  
Sbjct: 395 TADVQAFGTLVKAYARARDPDGAERVLDRLEAADVEPSVAVYSAVIAAFCTVGEMKRARE 454

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGE 392
           I ++M +  + PN +T+    WGYG+
Sbjct: 455 ILDRMFDASLRPNERTFAHFAWGYGQ 480



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/213 (21%), Positives = 95/213 (44%), Gaps = 13/213 (6%)

Query: 1   MNILVG----KGKPHEAHYIFNCLIEEGH--------RPTLITYTTLVAALTRQKRFKSI 48
            NIL+G    +G    A  +F  L   G         RP  +TYT  +     Q +  + 
Sbjct: 323 FNILIGGYLKQGNIGAAEGLFRELESSGTWDMESLGIRPDNVTYTLFLDYWASQGQVDAC 382

Query: 49  LSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
             +  ++ +  +  D   F  ++ A + + + D A ++  +++ +  +P+ + Y+ +I  
Sbjct: 383 ERIFDRMARKKVTADVQAFGTLVKAYARARDPDGAERVLDRLEAADVEPSVAVYSAVIAA 442

Query: 109 YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP 168
           +  VG+ + + ++L  M  D +++PN+RT+      +     I    +V   M+A+G++ 
Sbjct: 443 FCTVGEMKRAREILDRMF-DASLRPNERTFAHFAWGYGQLEDINGIVDVAKLMLANGLKL 501

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
                N + RA  + G +  A   L +  N +V
Sbjct: 502 KGANRNAIVRACEECGMSIGAIHALLDRLNPEV 534



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 78/413 (18%), Positives = 145/413 (35%), Gaps = 100/413 (24%)

Query: 33  TTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKD 92
           T+ VA++ R+KR+         V + G++  +    +        G+ D    +    +D
Sbjct: 67  TSAVASMRRRKRYNE--RTTGDVREVGVEAKASGSRSGGGRGRVRGDADPLGAVATLARD 124

Query: 93  SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIE 152
            G +PT  T+  +I   G +G+  E+L ++ +                          IE
Sbjct: 125 -GHRPTRKTFTAVIATLGGMGRATETLSVVPM--------------------------IE 157

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ-NNQVRPNERTCGII 211
           E           G + D   +N +A A+   G+   AE++   M     V  +  T   I
Sbjct: 158 E----------YGDEADVAVWNAVAHAHCASGDPVEAERIADRMAAEGGVGVSGATHPEI 207

Query: 212 VSGYCKEGNMEDAMRFLYRMK-ELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           +  Y + G    A R + RM  E  V P+   +N+ ++G  +  D +  D+         
Sbjct: 208 IYTYARYGEANRAYRLIRRMSNEHGVIPDERHYNAFLRGLCERDDLEEADE--------- 258

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFD-----DMVKAGIEPDIHVFSILAKGYVRAGE 325
                     ++  W++        E FD     D      +P    + +L   + R G 
Sbjct: 259 ----------VLRRWNN--------EKFDLERQSDRGGRVSKPSAASYGLLIDAWARRGN 300

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
              A  +L  M+   + P++ +F  +I G+     +  A  ++ ++              
Sbjct: 301 MLAARKLLQQMQWERIAPSLQLFNILIGGYLKQGNIGAAEGLFREL-------------- 346

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
                 E+   W        ME  G+RP   T  L  D W + G     +R+ 
Sbjct: 347 ------ESSGTWD-------MESLGIRPDNVTYTLFLDYWASQGQVDACERIF 386


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 215/422 (50%), Gaps = 5/422 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHR----PTLITYTTLVAALTRQKRFKSILSLISKVEKDG 59
           L  + +  +A ++ + ++ +  R    P +++YTT++  L R+ +      L  ++   G
Sbjct: 177 LCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQG 236

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           M P+ I +N +++    SG   EA+ IF+KM   G +P   TYNTL+      G+  E+ 
Sbjct: 237 MSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEAR 296

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K+   M + K  KP+   Y  L+  + ++  + +   ++  MV +G QPD   +N L  A
Sbjct: 297 KVFDSMVK-KGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGA 355

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           YA++G    A     +M+   + PN  T G ++   C+ G ++DAM    R+    + PN
Sbjct: 356 YAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPN 415

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            VVF +LI G       D  ++    M   G+ P+ + F+T+++     G++ + + IFD
Sbjct: 416 GVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFD 475

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            MV+  ++ D+  ++ L  GY   G+  +A  +L  M   GV PN V + T+I+G+C   
Sbjct: 476 LMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNG 535

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           +++ A S++ +M   G+NP +  Y T+L G  + ++   A+EL   M + G++    T  
Sbjct: 536 RIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYN 595

Query: 420 LV 421
           ++
Sbjct: 596 II 597



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 195/425 (45%), Gaps = 6/425 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSL-ISKVEKDGMKPDSILFNAMINACSESG 78
           +I  G     IT++ L+  L   KR    + + + ++   G  P++  +N ++    +  
Sbjct: 122 VIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDEN 181

Query: 79  NVDEAMKIFQKM----KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
              +A+ +   M       GC P   +Y T+I G    G+ +++  L   M  D+ + PN
Sbjct: 182 RSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEM-LDQGMSPN 240

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
             TYN L+  +CS    +EA  +  KM   G++PD VTYNTL     + G +  A ++  
Sbjct: 241 CITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFD 300

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
            M     +P+    G ++ GY  EG +    + L  M      P+  +FN LI  +    
Sbjct: 301 SMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHG 360

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
             D    A + M + G+ P++VT+ T+MDA    G +      FD ++  G+ P+  VF 
Sbjct: 361 MVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFR 420

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            L  G     +  KAE +   M   G+ PN + F T+++  C    + RA +I++ M  +
Sbjct: 421 TLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRV 480

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
            +  ++ TY TL+ GY    +   A +LL+ M   GV+P + T   + + +   G   +A
Sbjct: 481 DVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDA 540

Query: 435 KRVLK 439
             + +
Sbjct: 541 CSLFR 545



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/431 (24%), Positives = 211/431 (48%), Gaps = 10/431 (2%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
            AH++F+ L+      ++    + ++A+ R+    + LSL +++ +     D   ++ +I
Sbjct: 50  HAHHLFDELLRR-DTTSIFDLNSALSAVARESPAVA-LSLFNRMPR----ADLCTYSIVI 103

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
             CS +G++D A     ++  +G      T++ L+KG  +  +  +++ +          
Sbjct: 104 GCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGC 163

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVA----SGIQPDAVTYNTLARAYAQYGETY 187
            PN  +YNIL++  C +N  ++A ++++ M+A     G  PD V+Y T+     + G+  
Sbjct: 164 TPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLD 223

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A  +  EM +  + PN  T   ++ GYC  G  ++A+    +M    V P++V +N+L+
Sbjct: 224 KAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLM 283

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
                   S    K    M + G KPD   + T++  +++ G + +  ++ D MV+ G +
Sbjct: 284 VYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQ 343

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD ++F+IL   Y + G   +A    + MR+ G+HPN+V + TV+   C   K+  AMS 
Sbjct: 344 PDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQ 403

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           ++++   G+ PN   + TL+ G     +  +AEEL   M  +G+ P       + +    
Sbjct: 404 FDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCK 463

Query: 428 IGLAREAKRVL 438
            G+   AK + 
Sbjct: 464 EGMVTRAKNIF 474



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/463 (23%), Positives = 212/463 (45%), Gaps = 44/463 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L+ +G+  +A+ +F+ ++++G  P  ITY  L+       + K  + +  K+ +DG+
Sbjct: 213 INGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGV 272

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD + +N ++    ++G   EA K+F  M   G KP +S Y TL+ GY   G   +  +
Sbjct: 273 EPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQ 332

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL +M ++   +P+   +NIL+ A+     ++EA     KM   G+ P+ VTY T+  A 
Sbjct: 333 LLDVMVRN-GTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDAL 391

Query: 181 AQYGETY-----------------------------------RAEQMLFEMQNNQVRPNE 205
            + G+                                     +AE++  EM    + PN 
Sbjct: 392 CRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNT 451

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF-LDIKDSDGVDKALT 264
                +++  CKEG +  A      M  ++V  +++ + +LI G+ LD K    VD+A  
Sbjct: 452 IFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGK----VDEATK 507

Query: 265 LMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           L+E     GVKP+ VT++TI++ +   G +     +F  M   G+ P I ++S +  G  
Sbjct: 508 LLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLF 567

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           +      A+ +   M K G+   +  +  ++ G C       A+ ++  +C I  +   +
Sbjct: 568 QTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNR 627

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           T+  ++    +  +   A++L   +  +G+ P   T  L+  S
Sbjct: 628 TFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKS 670



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/452 (23%), Positives = 209/452 (46%), Gaps = 9/452 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L   G+  EA  +F+ ++++GH+P    Y TL+     +     +  L+  + ++G 
Sbjct: 283 MVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGT 342

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL- 119
           +PD  +FN +I A ++ G VDEAM  F KM+  G  P   TY T++     VGK ++++ 
Sbjct: 343 QPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMS 402

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +  +L+S+   + PN   +  L+   C+ +  ++A  +  +M+  GI P+ + +NTL   
Sbjct: 403 QFDRLISE--GLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNH 460

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G   RA+ +   M    V+ +  T   ++ GYC +G +++A + L  M    V PN
Sbjct: 461 LCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPN 520

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            V +N++I G+     +  ++ A +L  +    GV P +V +STI+        +   +E
Sbjct: 521 EVTYNTIINGYC---KNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKE 577

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           ++  M+K GI+  I  ++I+ +G  +      A  +  ++     H     F  +I    
Sbjct: 578 LYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALL 637

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
              +   A  ++  +   G+ PN+ TY  ++    E       ++L   +E+ G      
Sbjct: 638 KGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSR 697

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEEDRQSM 448
            +  +       G  R+A   L   +E+  S+
Sbjct: 698 MLNALVGKLPQKGEVRKAGVYLSKIDENNFSL 729



 Score = 43.5 bits (101), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 52/106 (49%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L+  G+  EA  +F  L+  G  P ++TY  ++ +L  Q   + +  L   +EK+G 
Sbjct: 633 IDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGC 692

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLI 106
             DS + NA++    + G V +A     K+ ++      ST  +L+
Sbjct: 693 TADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLV 738


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 204/416 (49%), Gaps = 2/416 (0%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           L+  L R       +S++ K+ K G+ PD+I FNA+IN     G + EA+++F +M   G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
            +P   +Y T+I G    G    ++ + + M Q+   KPN  TY+ ++ + C    + +A
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQN-GCKPNVVTYSTIIDSLCKDRLVNDA 252

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
              + +MV  GI P+  TYN++   +   G+   A ++  EM    V PN  T  I+V G
Sbjct: 253 MEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDG 312

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
            CKEG + +A      M E  V P++  +N+L+ G+   +  +   K   +M   G  P 
Sbjct: 313 LCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPG 372

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
             +++ +++ +  +  M + + +  +M    + PD   +S L +G  + G P++A ++  
Sbjct: 373 AHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFK 432

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            M  YG HPN+V +  ++ G+C    +  A+ + + M E  + PN+  Y  L+ G   A 
Sbjct: 433 EMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAG 492

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           +   A+EL   +   G RP   T  ++       GL+ EA  + +  E+D   +PN
Sbjct: 493 KLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDD-GFLPN 547



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 202/388 (52%), Gaps = 1/388 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           RP+++ +   + +  ++K++ +++SL ++++   +  +    N +IN      +VD ++ 
Sbjct: 90  RPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVS 149

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +  KM   G  P   T+N LI G  N GK +E+++L   M + +  +PN  +Y  ++   
Sbjct: 150 VLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVK-RGHEPNVISYTTVINGL 208

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C   +   A +V  KM  +G +P+ VTY+T+  +  +      A + L EM    + PN 
Sbjct: 209 CKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNV 268

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   IV G+C  G + +A R    M   +V PN V F  L+ G                
Sbjct: 269 FTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFET 328

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M E GV+PD+ T++ +MD +    LM + +++F+ M++ G  P  H ++IL  GY ++  
Sbjct: 329 MTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRR 388

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A+S+L  M    ++P+ V ++T++ G C   + + A++++++MC  G +PNL TY  
Sbjct: 389 MDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVI 448

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           LL G+ +      A +LL+ M+EK + P
Sbjct: 449 LLDGFCKHGHLDEALKLLKSMKEKKLEP 476



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 218/426 (51%), Gaps = 7/426 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +GK  EA  +FN +++ GH P +I+YTT++  L +       + +  K+E++G 
Sbjct: 170 INGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGC 229

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP+ + ++ +I++  +   V++AM+   +M + G  P   TYN+++ G+ N+G+  E+ +
Sbjct: 230 KPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATR 289

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M   ++V PN  T+ ILV   C +  + EA  V   M   G++PD  TYN L   Y
Sbjct: 290 LFKEMV-GRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGY 348

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                   A+++   M      P   +  I+++GYCK   M++A   L  M    ++P+ 
Sbjct: 349 CLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDT 408

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +++L++G   +       +AL L +E   +G  P++VT+  ++D +   G + +  ++
Sbjct: 409 VTYSTLMQGLCQLGRP---KEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKL 465

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
              M +  +EP+I  ++IL +G   AG+ + A+ + + +   G  P++  +T +I G   
Sbjct: 466 LKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLK 525

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
                 A  ++ KM + G  PN  +Y  ++ G+ + +    A  L+  M  K      ST
Sbjct: 526 EGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLST 585

Query: 418 IQLVAD 423
            Q++ D
Sbjct: 586 FQMLLD 591



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 168/378 (44%), Gaps = 45/378 (11%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D  + N   N C     VD+A+  F +M     +P+   +   +   G+  K ++   ++
Sbjct: 62  DGFVSNNSNNVC-----VDDALASFYRMVRINPRPSVVEFGKFL---GSFAKKKQYSTVV 113

Query: 123 QLMSQDK--NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L +Q     V  N  + NIL+   C  N ++ + +V+ KM   GI PDA+T+N L    
Sbjct: 114 SLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNAL---- 169

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                                          ++G C EG +++A+     M +    PN+
Sbjct: 170 -------------------------------INGLCNEGKIKEAVELFNEMVKRGHEPNV 198

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + + ++I G     ++         ME+ G KP+VVT+STI+D+     L+    E   +
Sbjct: 199 ISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSE 258

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ GI P++  ++ +  G+   G+  +A  +   M    V PN V FT ++ G C    
Sbjct: 259 MVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGM 318

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++E M E G+ P++ TY  L+ GY   +    A+++ ++M  KG  P   +  +
Sbjct: 319 VSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNI 378

Query: 421 VADSWRAIGLAREAKRVL 438
           + + +       EAK +L
Sbjct: 379 LINGYCKSRRMDEAKSLL 396



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 110/242 (45%)

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           RP+    G  +  + K+      +    +M    V  N+   N LI     +   D    
Sbjct: 90  RPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVS 149

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            L  M + G+ PD +TF+ +++   + G + +  E+F++MVK G EP++  ++ +  G  
Sbjct: 150 VLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLC 209

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           + G    A  +   M + G  PNVV ++T+I   C    +  AM    +M E GI PN+ 
Sbjct: 210 KTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVF 269

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY +++ G+    Q   A  L + M  + V P   T  ++ D     G+  EA+ V ++ 
Sbjct: 270 TYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETM 329

Query: 442 EE 443
            E
Sbjct: 330 TE 331



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 104/230 (45%), Gaps = 1/230 (0%)

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           ++DA+   YRM  +   P++V F   +  F   K    V      M+ F V  +V + + 
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           +++       +     +   M K GI PD   F+ L  G    G+ ++A  +   M K G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
             PNV+ +TTVI+G C       A+ +++KM + G  PN+ TY T++    + +    A 
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           E L  M E+G+ P   T   +   +  +G   EA R+ K     R  MPN
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEM-VGRDVMPN 302


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 210/403 (52%), Gaps = 2/403 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++E+  +P +  Y  +++   +  R +S  +++ ++++ G  PD +  N MI      G 
Sbjct: 35  ILEKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGK 94

Query: 80  VDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
           +D A+K+F+++ KD+ CKPT  TY  LI+ Y   G  +E+LKLL  M   + ++P+  TY
Sbjct: 95  IDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLS-RGLEPDTFTY 153

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           N++ R  C +  ++ A+  V  + + G +PD +TYN L RA    G+    E+ + E+ +
Sbjct: 154 NVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFS 213

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
               PN  T  I++S  C++G +E+++  +  MKE  + P+   ++ LI  F      D 
Sbjct: 214 RGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDM 273

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
             + L  M   G  PD+V ++TIM A    G      EIF  + + G  P++  ++ +  
Sbjct: 274 AIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLS 333

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
               +G+  +A  +++ M   G+ P+V+ + ++IS  C    +  A+ +   M      P
Sbjct: 334 ALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQP 393

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           N+ +Y+T+L G  +A +   A E+L  M E G +P ++T  L+
Sbjct: 394 NIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLL 436



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 185/385 (48%), Gaps = 4/385 (1%)

Query: 55  VEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK 114
           V KD  +PD IL   +I     S N+D+A ++   ++  G KP    YN +I G+    +
Sbjct: 2   VAKD-YQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59

Query: 115 PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVA-SGIQPDAVTY 173
            E +  +L  M + K   P+  T+NI++  +C K  I+ A  V  +++  +  +P  +TY
Sbjct: 60  IESAKTVLDRMKR-KGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITY 118

Query: 174 NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
             L  AY   G    A ++L EM +  + P+  T  +I  G CKEG ++ A  F+  +  
Sbjct: 119 TILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNS 178

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
               P+++ +N L++  L+    D  +K ++ +   G +P+VVT+S ++ +    G + +
Sbjct: 179 RGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEE 238

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
              +   M + G+ PD + +  L   + R G+   A   L  M   G  P++V + T+++
Sbjct: 239 SVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMA 298

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             C       A+ I+ K+ E+G  PN+ +Y T+L     +   +RA  ++  M  KG+ P
Sbjct: 299 ALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDP 358

Query: 414 KKSTIQLVADSWRAIGLAREAKRVL 438
              T   +       G+  EA  +L
Sbjct: 359 DVITYNSLISCLCRDGMVDEAIGLL 383



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 151/348 (43%), Gaps = 36/348 (10%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   EA  + + ++  G  P   TY  +   L ++ +       +  +   G KPD I 
Sbjct: 128 EGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVIT 187

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N ++ A    G  DE  K   ++   GC+P   TY+ LI      GK EES+ L+++M 
Sbjct: 188 YNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVM- 246

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++K + P+   Y+ L+ A+C +  ++ A   +  M+  G  PD V YNT           
Sbjct: 247 KEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNT----------- 295

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
                                   I++  CK GN + A+    ++ E+   PN+  +N++
Sbjct: 296 ------------------------IMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTM 331

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +       D       ++ M   G+ PDV+T+++++      G++ +   +  DM+    
Sbjct: 332 LSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRF 391

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
           +P+I  +  +  G  +A     A  +L +M + G  PN   +T +I G
Sbjct: 392 QPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEG 439



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 139/286 (48%), Gaps = 1/286 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK   A      L   G +P +ITY  L+ AL  Q ++      +S++   G +P+
Sbjct: 160 LCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPN 219

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + ++ +I++    G ++E++ + + MK+ G  P    Y+ LI  +   GK + +++ L 
Sbjct: 220 VVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLD 279

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D    P+   YN ++ A C   + + A  +  K+   G  P+  +YNT+  A    
Sbjct: 280 CMICD-GFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSS 338

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+ YRA  M+ +M +  + P+  T   ++S  C++G +++A+  L  M      PN+V +
Sbjct: 339 GDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSY 398

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            +++ G       D   + L  M E G +P+  T++ +++    +G
Sbjct: 399 KTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSG 444



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 6/167 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAAL-TRQKRFKSILSLISKVEKDG 59
           M  L   G    A  IF  L E G  P + +Y T+++AL +   R+++ L +IS++   G
Sbjct: 297 MAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRA-LGMISQMLSKG 355

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + PD I +N++I+     G VDEA+ +   M     +P   +Y T++ G     + ++++
Sbjct: 356 IDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAI 415

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAW---CSKNSIEEAWNVVYKMVA 163
           ++L  M ++   +PN+ TY +L+       S+    E  N +Y M A
Sbjct: 416 EVLAAMIEN-GCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIMNA 461



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 74/139 (53%), Gaps = 2/139 (1%)

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV    +PD+ + + L KG+  +    KA  ++  + K+G  P+V  +  VISG+C A +
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGY-GEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           ++ A ++ ++M   G +P++ T+  ++  + G+ K     +   +++++   +P   T  
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 420 LVADSWRAIGLAREAKRVL 438
           ++ +++   G   EA ++L
Sbjct: 120 ILIEAYILEGGIDEALKLL 138


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 207/454 (45%), Gaps = 41/454 (9%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++ +G  P + TYT ++ AL  + R       + ++    + P+ + +  +I+   + G 
Sbjct: 37  MVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGR 96

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           VDEA+ +  KM+   C PT  TYN+LI G     +  E+  LL+ M     + P+  TY 
Sbjct: 97  VDEAVALLSKMRKK-CVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCI-PDIFTYT 154

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM-QN 198
            L+  +C     ++A  V  ++VA G +PD VTY+ L     + G    A  +   M ++
Sbjct: 155 TLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKS 214

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
               PN  T   ++SG+C+ G M++AM  L RM E    P++V + +L+ GF  +   D 
Sbjct: 215 GSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDD 274

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
               L  M   G+ PDVVTF+++MD       +     I  +M +    P ++ ++ +  
Sbjct: 275 AYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILD 334

Query: 319 GYVRAGEPQKAE---------------------------------SILTSMRKYGVHPNV 345
           GY RA + ++A                                   ++   R+   +P+V
Sbjct: 335 GYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDV 394

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMC-EIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
           VM+TTVI G C   K+  A  +Y KM  E G  PN  TY TL+ G   A    RA   + 
Sbjct: 395 VMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI- 453

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
              EKG  P   T  L+ D++R      +A+ +L
Sbjct: 454 ---EKGCVPNIGTYNLLIDAFRKANRDEDARELL 484



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/428 (28%), Positives = 200/428 (46%), Gaps = 15/428 (3%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
            +TYT+L+  L + KR +  L  + K+   G  PD   + A+I+A      + EA K  +
Sbjct: 11  FVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLE 70

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
           +M +    P   TY  LI G    G+ +E++ LL  M   K   P   TYN L+   C  
Sbjct: 71  EMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR--KKCVPTAVTYNSLISGLCKA 128

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
               EA++++ +MV SG  PD  TY TL   + +  ++  A ++  ++     RP+  T 
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 209 GIIVSGYCKEGNMEDAMRFLYRM-KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
             ++ G CKEG +++A+    RM K     PN V +NSLI GF  +   D     L  M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
           E G  PDVVT++T+M+ +     +    ++ + M + G+ PD+  F+ L  G  R     
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            A  IL  MR+    P V  + T++ G+C A +++ A     +  E+   PN+ ++  ++
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIMI 366

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK-----RVLKSAE 442
            G  +  +   A EL++    +   P       V D     GL RE K     RV +   
Sbjct: 367 RGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVID-----GLCREKKVDEACRVYRKML 421

Query: 443 EDRQSMPN 450
           E+   +PN
Sbjct: 422 EEPGCLPN 429



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 205/406 (50%), Gaps = 48/406 (11%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +  EA+ +   ++  G  P + TYTTL+    + K+    L +  ++   G +PD + ++
Sbjct: 130 RASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYS 189

Query: 69  AMINACSESGNVDEAMKIFQKMKDSG-CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            +I+   + G + EA+ +F +M  SG C P T TYN+LI G+  +GK +E++ LL+ M++
Sbjct: 190 CLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAE 249

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
             +  P+  TY  L+  +C    +++A++++ +M   G+ PD VT+ +L     +     
Sbjct: 250 TGS-SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +L EM+     P   T   I+ GYC+   +E+A +F+  ++E++  PN+V FN +I
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMI 366

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +G   +  S    +A+ L+EE   +   PDVV ++T++D        G C+E        
Sbjct: 367 RGLCKVNRS---SEAMELVEEARRRRCNPDVVMYTTVID--------GLCRE-------K 408

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
            ++    V+  + +      EP             G  PN + ++T+I+G CNA  + RA
Sbjct: 409 KVDEACRVYRKMLE------EP-------------GCLPNSITYSTLITGLCNAGMLDRA 449

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
               EK    G  PN+ TY  L+  + +A +   A ELL  M ++G
Sbjct: 450 RGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 163/347 (46%), Gaps = 3/347 (0%)

Query: 93  SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIE 152
           + C     TY +LI+G   V + E++L  L  M   K   P+  TY  ++ A C +N + 
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVS-KGFHPDVYTYTAVIHALCVENRLH 63

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           EA   + +M    + P+ VTY  L     + G    A  +L +M+   V P   T   ++
Sbjct: 64  EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLI 122

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           SG CK     +A   L  M      P++  + +LI GF   K SD   +    +   G +
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR 182

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG-IEPDIHVFSILAKGYVRAGEPQKAES 331
           PDVVT+S ++D     G + +  ++F  M+K+G   P+   ++ L  G+ R G+  +A +
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +L  M + G  P+VV +TT+++G+C   ++  A  +  +M   G+ P++ T+ +L+ G  
Sbjct: 243 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLC 302

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
              +   A  +L  M  K   P   T   + D +       EA++ +
Sbjct: 303 RENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM 349



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 139/300 (46%), Gaps = 43/300 (14%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA  +   + E G  P ++TYTTL+    +  R      L++++ + G+ PD + F
Sbjct: 235 GKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTF 294

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            ++++       + +A+ I  +M+   C PT  TYNT++ GY    + EE+ K    M +
Sbjct: 295 TSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARK---FMLE 351

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           + +  PN  ++NI++R  C  N   EA  +V +       PD V Y T            
Sbjct: 352 EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTT------------ 399

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM-KELEVHPNLVVFNSL 246
                                  ++ G C+E  +++A R   +M +E    PN + +++L
Sbjct: 400 -----------------------VIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTL 436

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G     ++  +D+A   +E+ G  P++ T++ ++DA+  A      +E+ DDMV+ G 
Sbjct: 437 ITGLC---NAGMLDRARGYIEK-GCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 213/429 (49%), Gaps = 39/429 (9%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRF-KSILSLISKVEKDGMKPDSILFNAMI 71
           A   F CL+ +G +  +I  ++L+  L   KR  +++  L  ++ + G  PD+I ++ ++
Sbjct: 122 AFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVL 181

Query: 72  NACSESGNVDEAMKIFQKM--KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK 129
            +  + G    A+ I +    +  GC      Y+T++ G    GK  E+  L   M+Q +
Sbjct: 182 KSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQ-Q 240

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
            V PN  TYN ++ A C   ++++A  ++ +MV +G+QPD VTYNTL   Y+  G+  +A
Sbjct: 241 GVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQA 300

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
            +M  EM +  V PN  TC   V+  CK G +E+A  F               F+S++  
Sbjct: 301 VRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREF---------------FDSMLAK 345

Query: 250 FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
                               G K +++++ST++  +++AG +     +F+ MV+ GI P+
Sbjct: 346 --------------------GHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPN 385

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
            HVF+IL  GY + G  ++A  I   M+K G++P+V+ +  VI  +C    M  AM  + 
Sbjct: 386 QHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFN 445

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
            M + G+ PN   Y+ L+ G+       +AEEL+  +  KG+ P   +   + +     G
Sbjct: 446 HMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEG 505

Query: 430 LAREAKRVL 438
              EA+R+ 
Sbjct: 506 RVFEAQRIF 514



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 211/408 (51%), Gaps = 1/408 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA  +F+ + ++G  P ++TY +++ AL + +       ++ ++  +G++PD
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ +N +I+  S  G   +A+++F++M   G  P T T +T +      G+ EE+ +   
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFD 340

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K  K N  +Y+ L+  + +   + +  N+   MV  GI P+   +N L   YA+ 
Sbjct: 341 SMLA-KGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKC 399

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A  +  +MQ   + P+  T   ++  +C+ G+M+DAM     M +  V PN  V+
Sbjct: 400 GMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVY 459

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
             LI+GF    D    ++ +  +   G+ P +++F+++++     G + + Q IFD +++
Sbjct: 460 QCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIR 519

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G + D+++F+ L  GY   G+  +A  +  +M   G+ P++V + T+++G C   ++  
Sbjct: 520 TGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDD 579

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
            + ++ ++   G+ P   TY  +L G   A +   A+E+ Q M E G+
Sbjct: 580 GLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGI 627



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/431 (21%), Positives = 205/431 (47%), Gaps = 1/431 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A  +F  +   G  P  +T +T VA L +  R +        +   G K + I +
Sbjct: 295 GQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISY 354

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +++  + +G + +   +F  M   G  P    +N L+ GY   G   E++ + + M Q
Sbjct: 355 STLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDM-Q 413

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + + P+  TY  ++ A+C   S+++A +    M+  G++P+   Y  L + +  +G+  
Sbjct: 414 KRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLV 473

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +AE++++E++N  + P   +   +++  CKEG + +A R    +       ++ +F SLI
Sbjct: 474 KAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLI 533

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G+  I       +    M   G++PD+VT+ T+++     G +     +F +++  G++
Sbjct: 534 DGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVK 593

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P    + I+  G   AG    A+ +   M + G+   +  ++ +++G C     + A+++
Sbjct: 594 PTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITV 653

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           ++K+C + +  ++     ++    +A++   AE L   + + G+ P   T  ++ ++   
Sbjct: 654 FQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIK 713

Query: 428 IGLAREAKRVL 438
            G   EA+ V 
Sbjct: 714 EGSVEEAEGVF 724



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/454 (22%), Positives = 197/454 (43%), Gaps = 71/454 (15%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
            L   G+  EA   F+ ++ +GH+  +I+Y+TL+           + +L + + +DG+ P
Sbjct: 325 FLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVP 384

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           +  +FN ++N  ++ G V EAM IF+ M+  G  P   TY  +I  +  +G  ++++   
Sbjct: 385 NQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKF 444

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             M  DK V+PN   Y  L++ +C+   + +A  +VY++   G+ P  +++ +L     +
Sbjct: 445 NHMI-DKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCK 503

Query: 183 YGETYRAEQML-------------------------------FEMQNNQV----RPNERT 207
            G  + A+++                                F + +  V     P+  T
Sbjct: 504 EGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVT 563

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
            G +V+G CK G ++D                L++F  L+                    
Sbjct: 564 YGTLVNGCCKNGRIDDG---------------LILFRELLHK------------------ 590

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
             GVKP   T+  I+D    AG     +E+F +M+++GI   I  +SIL  G  R    +
Sbjct: 591 --GVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTE 648

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           +A ++   +    V  ++V+   +IS    A + + A  ++  + + G+ P ++TY  ++
Sbjct: 649 EAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMM 708

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
               +      AE +  VM + G+ P    I ++
Sbjct: 709 ENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVI 742



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 146/313 (46%), Gaps = 1/313 (0%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           FN +I++G  P    Y  L+              L+ ++   G+ P  + F ++IN   +
Sbjct: 444 FNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCK 503

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
            G V EA +IF  +  +G K   + + +LI GY  +GK  E+ ++   M     ++P+  
Sbjct: 504 EGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVS-VGIEPDIV 562

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           TY  LV   C    I++   +  +++  G++P   TY  +       G T  A++M  EM
Sbjct: 563 TYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEM 622

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
             + +     T  I+++G C+    E+A+    ++  + V  ++V+ N +I      +  
Sbjct: 623 IESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRR 682

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           +  +     + ++G+ P V T++ +M+     G + + + +F  M+K+G+ P  H  +++
Sbjct: 683 EEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVI 742

Query: 317 AKGYVRAGEPQKA 329
            +  +  GE  KA
Sbjct: 743 VRTLLEKGEIVKA 755



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 159/353 (45%), Gaps = 15/353 (4%)

Query: 115 PEESLKLLQLMSQDKNVK---PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAV 171
           P  ++ L   MS     +   P   TY+IL+   C    ++ A+     ++  G++ D +
Sbjct: 80  PALAVALFNRMSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVI 139

Query: 172 TYNTLARAYAQYGETYRAEQMLFE-MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
             ++L R       T  A  +LF  M      P+  +   ++   C +G  + A+  L R
Sbjct: 140 VVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDIL-R 198

Query: 231 M--KELEVHP-NLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDA 284
           M  K+    P N+VV+++++ G         V +A  L  E    GV P+VVT+++++ A
Sbjct: 199 MAVKQGGGCPCNVVVYSTVVHGLFK---EGKVGEACDLFHEMTQQGVPPNVVTYNSVIHA 255

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
              A  + K Q I   MV  G++PD   ++ L  GY   G+ ++A  +   M   GV PN
Sbjct: 256 LCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPN 315

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
            V  +T ++  C   +++ A   ++ M   G   N+ +Y TLL GY  A        L  
Sbjct: 316 TVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFN 375

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAV 457
           +M   G+ P +    ++ + +   G+ REA  + +  ++ R   P+    +AV
Sbjct: 376 LMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQK-RGLNPDVLTYLAV 427


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 219/434 (50%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N LV  G+ H AHY++  +I  G  P +   + +V A  +  +       + K+E  G+
Sbjct: 198 LNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGV 257

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ + ++++IN     G+V+ A  + + M + G      TY  LIKGY    K +E+ K
Sbjct: 258 EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEK 317

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+ M ++  + P++R Y +L+  +C    I++A  ++ +M+  G++ +    N+L   Y
Sbjct: 318 VLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGY 377

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + GE + AE ++  M +  ++P+  +   ++ GYC+EG+  +A     +M +  + P +
Sbjct: 378 CKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTV 437

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +N+L+KG   +   D   +   LM + GV PD V +ST++D             ++ D
Sbjct: 438 LTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKD 497

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           ++  G       F+ +  G  + G+  +AE I   M+  G  P+ + + T+I G+C A  
Sbjct: 498 ILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASN 557

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           + +A  +   M    I+P+++ Y +L+ G  ++++     +LL  M  +G+ P   T   
Sbjct: 558 VGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGA 617

Query: 421 VADSWRAIGLAREA 434
           + D W   G+  +A
Sbjct: 618 LIDGWCKEGMLDKA 631



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 217/415 (52%), Gaps = 4/415 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + + V KG    A Y+F+ + + G  P+L +  +L+  L +     +   +  ++ + G+
Sbjct: 163 LKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGI 222

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD  + + M+NA  + G VDEA    +KM++ G +P   TY++LI GY ++G  E +  
Sbjct: 223 VPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKG 282

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV-ASGIQPDAVTYNTLARA 179
           +L+ MS+ K V  N  TY +L++ +C +  ++EA  V+  M   + + PD   Y  L   
Sbjct: 283 VLKFMSE-KGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDG 341

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           Y + G+   A ++L EM    ++ N   C  +++GYCK G + +A   + RM +  + P+
Sbjct: 342 YCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPD 401

Query: 240 LVVFNSLIKGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
              +N+L+ G+  +   S+  +    +++E G++P V+T++T++      G      +I+
Sbjct: 402 SYSYNTLLDGYCREGHTSEAFNLCDKMLQE-GIEPTVLTYNTLLKGLCRVGAFDDALQIW 460

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
             M+K G+ PD   +S L  G  +    + A ++   +   G   + + F T+ISG C  
Sbjct: 461 HLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKM 520

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            KM  A  I++KM ++G +P+  TY TL+ GY +A    +A ++   ME + + P
Sbjct: 521 GKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISP 575



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 203/439 (46%), Gaps = 33/439 (7%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  I++ +++ G  P  + Y+TL+  L + + F+   +L   +   G     I F
Sbjct: 451 GAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 510

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N MI+   + G + EA +IF KMKD GC P   TY TLI GY       ++ K+   M +
Sbjct: 511 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 570

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  + P+   YN L+        + E  +++ +M   G+ P+ VTY  L   + + G   
Sbjct: 571 EX-ISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD 629

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE-------------- 233
           +A    FEM  N +  N   C  +VSG  + G +++A   + +M +              
Sbjct: 630 KAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSD 689

Query: 234 ------------------LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
                               + PN +V+N  I G       D   +  +++   G  PD 
Sbjct: 690 IRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 749

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
            T+ T++  +S+AG + +   + D+M++ G+ P+I  ++ L  G  ++    +A+ +   
Sbjct: 750 FTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHK 809

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           + + G+ PNVV + T+I G+C    M  A  + +KM E GI+P++ TY  L+ G  +   
Sbjct: 810 LHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGD 869

Query: 396 PWRAEELLQVMEEKGVRPK 414
             R+ +LL  M + GV  K
Sbjct: 870 IERSMKLLNQMIKAGVDSK 888



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/423 (24%), Positives = 197/423 (46%), Gaps = 4/423 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   EA  + + +++EG  PT++TY TL+  L R   F   L +   + K G+ PD + 
Sbjct: 415 EGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVG 474

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +++   +  N + A  +++ +   G   +  T+NT+I G   +GK  E+ ++   M 
Sbjct: 475 YSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKM- 533

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +D    P+  TY  L+  +C  +++ +A+ V   M    I P    YN+L     +    
Sbjct: 534 KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRL 593

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
                +L EM    + PN  T G ++ G+CKEG ++ A    + M E  +  N+++ +++
Sbjct: 594 VEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTM 653

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + G   +   D  +  +  M + G  PD   F   + +      + K  +  D+  K  +
Sbjct: 654 VSGLYRLGRIDEANLLMQKMVDHGFFPDHECF---LKSDIRYAAIQKIADSLDESCKTFL 710

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+  V++I   G  + G+   A    + +   G  P+   + T+I G+  A  +  A  
Sbjct: 711 LPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFR 770

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           + ++M   G+ PN+ TY  L+ G  +++   RA+ L   + +KG+ P   T   + D + 
Sbjct: 771 LRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYC 830

Query: 427 AIG 429
            IG
Sbjct: 831 KIG 833



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/442 (23%), Positives = 194/442 (43%), Gaps = 33/442 (7%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  + + ++  G +  L    +L+    ++        +I+++    +KPDS  +
Sbjct: 346 GKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSY 405

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +++     G+  EA  +  KM   G +PT  TYNTL+KG   VG  +++L++  LM +
Sbjct: 406 NTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMK 465

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              V P++  Y+ L+       + E A  +   ++A G     +T+NT+     + G+  
Sbjct: 466 -XGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMV 524

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            AE++  +M++    P+  T   ++ GYCK  N+  A +    M+   + P++ ++NSLI
Sbjct: 525 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLI 584

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G    +        LT M   G+ P++VT+  ++D W   G++ K    + +M + G+ 
Sbjct: 585 SGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLS 644

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH------------------------- 342
            +I + S +  G  R G   +A  ++  M  +G                           
Sbjct: 645 ANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDE 704

Query: 343 -------PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
                  PN +++   I+G C   K+  A   +  +   G  P+  TY TL+ GY  A  
Sbjct: 705 SCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGN 764

Query: 396 PWRAEELLQVMEEKGVRPKKST 417
              A  L   M  +G+ P   T
Sbjct: 765 VDEAFRLRDEMLRRGLVPNIVT 786



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/347 (23%), Positives = 162/347 (46%), Gaps = 34/347 (9%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P++  Y +L++ L + +R      L++++   G+ P+ + + A+I+   + G +D+A   
Sbjct: 575 PSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSS 634

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM--------------------- 125
           + +M ++G        +T++ G   +G+ +E+  L+Q M                     
Sbjct: 635 YFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAA 694

Query: 126 ------SQDKNVK----PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
                 S D++ K    PN+  YNI +   C    +++A      +   G  PD  TY T
Sbjct: 695 IQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCT 754

Query: 176 LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
           L   Y+  G    A ++  EM    + PN  T   +++G CK  N++ A R  +++ +  
Sbjct: 755 LIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKG 814

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           + PN+V +N+LI G+  I + D   K    M E G+ P VVT+S +++     G + +  
Sbjct: 815 LFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSM 874

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAG---EPQKAESILTSMRKY 339
           ++ + M+KAG++  +  +  L +G  +     E  K E++  +M  +
Sbjct: 875 KLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNEMSKPEALKQNMNCF 921



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 148/302 (49%), Gaps = 1/302 (0%)

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
            ++++++ +  K   + A  V   M   G  P   + N+L     + GET+ A  +  +M
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
               + P+     I+V+ +CK+G +++A  F+ +M+ L V PN+V ++SLI G++ + D 
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV-KAGIEPDIHVFSI 315
           +     L  M E GV  +VVT++ ++  +     M + +++   M  +A + PD   + +
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  GY R G+   A  +L  M + G+  N+ +  ++I+G+C   ++  A  +  +M +  
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           + P+  +Y TLL GY        A  L   M ++G+ P   T   +      +G   +A 
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457

Query: 436 RV 437
           ++
Sbjct: 458 QI 459



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 112/267 (41%), Gaps = 32/267 (11%)

Query: 194 FEMQNNQVRPNERTCGIIVSGYCK------EGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           F  +    RPN       V  YCK       G M D  R                 N L+
Sbjct: 91  FVSKQQNFRPN-------VKSYCKLVHILSRGRMYDETR--------------AYLNQLV 129

Query: 248 KGFLDIKDSDGV--DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
                 KD   V  D+ + +  EF   P V  F  I+  +   GL      +FD+M K G
Sbjct: 130 D-LCKFKDRGNVIWDELVGVYREFAFSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCG 186

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
             P +   + L    V+ GE   A  +   M + G+ P+V M + +++ +C   K+  A 
Sbjct: 187 RIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAA 246

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
              +KM  +G+ PN+ TY +L+ GY        A+ +L+ M EKGV     T  L+   +
Sbjct: 247 GFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGY 306

Query: 426 RAIGLAREAKRVLKSAEEDRQSMPNKK 452
                  EA++VL+  +E+   +P+++
Sbjct: 307 CKQCKMDEAEKVLRGMQEEAALVPDER 333


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 207/454 (45%), Gaps = 41/454 (9%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++ +G  P + TYT ++ AL  + R       + ++    + P+ + +  +I+   + G 
Sbjct: 37  MVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGR 96

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           VDEA+ +  KM+   C PT  TYN+LI G     +  E+  LL+ M     + P+  TY 
Sbjct: 97  VDEAVALLSKMRKK-CVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCI-PDIFTYT 154

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM-QN 198
            L+  +C     ++A  V  ++VA G +PD VTY+ L     + G    A  +   M ++
Sbjct: 155 TLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKS 214

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
               PN  T   ++SG+C+ G M++AM  L RM E    P++V + +L+ GF  +   D 
Sbjct: 215 GSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDD 274

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
               L  M   G+ PDVVTF+++MD       +     I  +M +    P ++ ++ +  
Sbjct: 275 AYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILD 334

Query: 319 GYVRAGEPQKAE---------------------------------SILTSMRKYGVHPNV 345
           GY RA + ++A                                   ++   R+   +P+V
Sbjct: 335 GYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDV 394

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMC-EIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
           VM+TTVI G C   K+  A  +Y KM  E G  PN  TY TL+ G   A    RA   + 
Sbjct: 395 VMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI- 453

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
              EKG  P   T  L+ D++R      +A+ +L
Sbjct: 454 ---EKGCVPNIGTYNLLIDAFRKANRDEDARELL 484



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 123/428 (28%), Positives = 200/428 (46%), Gaps = 15/428 (3%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
            +TYT+L+  L + KR +  L  + K+   G  PD   + A+I+A      + EA K  +
Sbjct: 11  FVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLE 70

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
           +M +    P   TY  LI G    G+ +E++ LL  M   K   P   TYN L+   C  
Sbjct: 71  EMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR--KKCVPTAVTYNSLISGLCKA 128

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
               EA++++ +MV SG  PD  TY TL   + +  ++  A ++  ++     RP+  T 
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 209 GIIVSGYCKEGNMEDAMRFLYRM-KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
             ++ G CKEG +++A+    RM K     PN V +NSLI GF  +   D     L  M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
           E G  PDVVT++T+M+ +     +    ++ + M + G+ PD+  F+ L  G  R     
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            A  IL  MR+    P V  + T++ G+C A +++ A     +  E+   PN+ ++  ++
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIMI 366

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK-----RVLKSAE 442
            G  +  +   A EL++    +   P       V D     GL RE K     RV +   
Sbjct: 367 RGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVID-----GLCREKKVDEACRVYRKML 421

Query: 443 EDRQSMPN 450
           E+   +PN
Sbjct: 422 EEPGCLPN 429



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 205/406 (50%), Gaps = 48/406 (11%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +  EA+ +   ++  G  P + TYTTL+    + K+    L +  ++   G +PD + ++
Sbjct: 130 RASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYS 189

Query: 69  AMINACSESGNVDEAMKIFQKMKDSG-CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            +I+   + G + EA+ +F +M  SG C P T TYN+LI G+  +GK +E++ LL+ M++
Sbjct: 190 CLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAE 249

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
             +  P+  TY  L+  +C    +++A++++ +M   G+ PD VT+ +L     +     
Sbjct: 250 TGS-SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +L EM+     P   T   I+ GYC+   +E+A +F+  ++E++  PN+V FN +I
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMI 366

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +G   +  S    +A+ L+EE   +   PDVV ++T++D        G C+E        
Sbjct: 367 RGLCKVNRS---SEAMELVEEARRRRCNPDVVMYTTVID--------GLCRE-------K 408

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
            ++    V+  + +      EP             G  PN + ++T+++G CNA  + RA
Sbjct: 409 KVDEACRVYRKMLE------EP-------------GCLPNSITYSTLVTGLCNAGMLDRA 449

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
               EK    G  PN+ TY  L+  + +A +   A ELL  M ++G
Sbjct: 450 RGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 173/337 (51%), Gaps = 11/337 (3%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG-MKPDSILF 67
           K  +A  +F  L+  G RP ++TY+ L+  L ++ R K  + L  ++ K G   P+++ +
Sbjct: 165 KSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTY 224

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N++I+     G +DEAM + ++M ++G  P   TY TL+ G+  + + +++  LL  M++
Sbjct: 225 NSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTR 284

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K + P+  T+  L+   C +N + +A +++ +M      P   TYNT+   Y +  +  
Sbjct: 285 -KGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLE 343

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A + + E  +    PN  +  I++ G CK     +AM  +   +    +P++V++ ++I
Sbjct: 344 EARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVI 401

Query: 248 KGFLDIKDSDGVDKAL-TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
            G    K  D   +    ++EE G  P+ +T+ST++    +AG++ + +      ++ G 
Sbjct: 402 DGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRAR----GYIEKGC 457

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSM--RKYGV 341
            P+I  +++L   + +A   + A  +L  M  R +GV
Sbjct: 458 VPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGFGV 494



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 163/347 (46%), Gaps = 3/347 (0%)

Query: 93  SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIE 152
           + C     TY +LI+G   V + E++L  L  M   K   P+  TY  ++ A C +N + 
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVS-KGFHPDVYTYTAVIHALCVENRLH 63

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           EA   + +M    + P+ VTY  L     + G    A  +L +M+   V P   T   ++
Sbjct: 64  EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLI 122

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           SG CK     +A   L  M      P++  + +LI GF   K SD   +    +   G +
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR 182

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG-IEPDIHVFSILAKGYVRAGEPQKAES 331
           PDVVT+S ++D     G + +  ++F  M+K+G   P+   ++ L  G+ R G+  +A +
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +L  M + G  P+VV +TT+++G+C   ++  A  +  +M   G+ P++ T+ +L+ G  
Sbjct: 243 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLC 302

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
              +   A  +L  M  K   P   T   + D +       EA++ +
Sbjct: 303 RENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM 349



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 139/300 (46%), Gaps = 43/300 (14%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA  +   + E G  P ++TYTTL+    +  R      L++++ + G+ PD + F
Sbjct: 235 GKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTF 294

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            ++++       + +A+ I  +M+   C PT  TYNT++ GY    + EE+ K    M +
Sbjct: 295 TSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARK---FMLE 351

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           + +  PN  ++NI++R  C  N   EA  +V +       PD V Y T            
Sbjct: 352 EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTT------------ 399

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM-KELEVHPNLVVFNSL 246
                                  ++ G C+E  +++A R   +M +E    PN + +++L
Sbjct: 400 -----------------------VIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTL 436

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + G     ++  +D+A   +E+ G  P++ T++ ++DA+  A      +E+ DDMV+ G 
Sbjct: 437 VTGLC---NAGMLDRARGYIEK-GCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 223/444 (50%), Gaps = 19/444 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK-DG 59
           MN L  +G+  EA  + + ++E G +P  ITY T V  + +     S L+L+ K+E+   
Sbjct: 189 MNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISH 248

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +KP+ ++++A+I+   + G   ++  +F +M+D G  P   TYN +I G+   G+   + 
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +LLQ M + K + PN  TYN L+ A+  +    EA  +  +M+  GI P+ +TYN++   
Sbjct: 309 RLLQEMLERK-ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG 367

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + +      AE M + M      P+  T   ++ GYC    ++D M  L+ M    +  N
Sbjct: 368 FCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN 427

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            V +N+LI GF  + D   ++ AL L ++    GV PD+VT +T++D     G +    E
Sbjct: 428 TVTYNTLIHGFCLVGD---LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 484

Query: 297 IFDDMVKA-----------GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
           +F  M K+           G+EPD+  ++IL  G +  G+  +AE +   M   G+ P+ 
Sbjct: 485 MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT 544

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
           + ++++I G C   ++  A  ++  M     +PN+ T+ TL+ GY +A +     EL   
Sbjct: 545 ITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCE 604

Query: 406 MEEKGVRPKKSTIQLVADSWRAIG 429
           M  +G+         +   +R +G
Sbjct: 605 MGRRGIVADAIIYITLIYGFRKVG 628



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 209/446 (46%), Gaps = 22/446 (4%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           F  L + G  P ++T+TTL+  L    R    L L  ++     +PD + F  ++N    
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCR 194

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
            G V EA+ +  +M ++G +P   TY T + G   +G    +L LL+ M +  ++KPN  
Sbjct: 195 EGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVV 254

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
            Y+ ++   C      ++ N+  +M   GI P+ VTYN +   +   G    A+++L EM
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
              ++ PN  T   +++ + KEG   +A      M    + PN + +NS+I GF      
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 374

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           D  +    LM   G  PDV TF+T++D +  A  +    E+  +M + G+  +   ++ L
Sbjct: 375 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 434

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI-- 374
             G+   G+   A  +   M   GV P++V   T++ G C+  K++ A+ +++ M +   
Sbjct: 435 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 375 ---------GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
                    G+ P++ TY  L+ G     +   AEEL + M  +G+ P   T   + D  
Sbjct: 495 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID-- 552

Query: 426 RAIGLAREAKRVLKSAEEDRQSMPNK 451
              GL ++++  L  A +   SM +K
Sbjct: 553 ---GLCKQSR--LDEATQMFVSMGSK 573



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 200/416 (48%), Gaps = 13/416 (3%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           RP ++T+TTL+  L R+ R    ++L+ ++ ++G++PD I +   ++   + G+   A+ 
Sbjct: 179 RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238

Query: 86  IFQKMKD-SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
           + +KM++ S  KP    Y+ +I G    G+  +S  L   M QDK + PN  TYN ++  
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEM-QDKGIFPNIVTYNCMIGG 297

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +C       A  ++ +M+   I P+ VTYN L  A+ + G+ + A ++  EM    + PN
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   ++ G+CK+  ++ A    Y M      P++  F +LI G+   K  D   + L 
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M   G+  + VT++T++  +   G +    ++   M+ +G+ PDI   + L  G    G
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477

Query: 325 EPQKAESILTSMRKY-----------GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           + + A  +  +M+K            GV P+V+ +  +I G  N  K   A  +YE+M  
Sbjct: 478 KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH 537

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
            GI P+  TY +++ G  +  +   A ++   M  K   P   T   + + +   G
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAG 593



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 204/441 (46%), Gaps = 30/441 (6%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           R  + ++T L+       +    LS   K+ K G+ PD + F  +++       V EA+ 
Sbjct: 113 RCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALD 172

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +F ++    C+P   T+ TL+ G    G+  E++ LL  M ++  ++P+  TY   V   
Sbjct: 173 LFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVEN-GLQPDQITYGTFVDGM 227

Query: 146 CSKNSIEEAWNVVYKM-VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           C       A N++ KM   S I+P+ V Y+ +     + G    +  +  EMQ+  + PN
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPN 287

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   ++ G+C  G    A R L  M E ++ PN+V +N+LI  F  +K+    + A  
Sbjct: 288 IVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAF--VKEGKFFEAA-E 344

Query: 265 LMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           L +E    G+ P+ +T+++++D +     +   +++F  M   G  PD+  F+ L  GY 
Sbjct: 345 LYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYC 404

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
            A        +L  M + G+  N V + T+I G+C    +  A+ + ++M   G+ P++ 
Sbjct: 405 GAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIV 464

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEE-----------KGVRPKKSTIQLVADSWRAIGL 430
           T  TLL G  +  +   A E+ + M++            GV P   T  ++       GL
Sbjct: 465 TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL-----ICGL 519

Query: 431 AREAKRVLKSAEEDRQSMPNK 451
             E K +   AEE  + MP++
Sbjct: 520 INEGKFL--EAEELYEEMPHR 538



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 95/415 (22%), Positives = 203/415 (48%), Gaps = 12/415 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  ++H +F  + ++G  P ++TY  ++       R+ +   L+ ++ +  + P+
Sbjct: 263 LCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPN 322

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +NA+INA  + G   EA +++ +M   G  P T TYN++I G+    + + +  +  
Sbjct: 323 VVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFY 382

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           LM+  K   P+  T+  L+  +C    I++   ++++M   G+  + VTYNTL   +   
Sbjct: 383 LMAT-KGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLV 441

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-------- 235
           G+   A  +  +M ++ V P+  TC  ++ G C  G ++DA+     M++ +        
Sbjct: 442 GDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHP 501

Query: 236 ---VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMG 292
              V P+++ +N LI G ++       ++    M   G+ PD +T+S+++D       + 
Sbjct: 502 FNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 561

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           +  ++F  M      P++  F+ L  GY +AG       +   M + G+  + +++ T+I
Sbjct: 562 EATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLI 621

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
            G+     +  A+ I+++M   G+ P+  T   +L G+   ++  RA  +L+ ++
Sbjct: 622 YGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 182/385 (47%), Gaps = 16/385 (4%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N ++G     G+   A  +   ++E    P ++TY  L+ A  ++ +F     L  ++  
Sbjct: 292 NCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLP 351

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+ P++I +N+MI+   +   +D A  +F  M   GC P   T+ TLI GY    + ++
Sbjct: 352 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 411

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
            ++LL  M + + +  N  TYN L+  +C    +  A ++  +M++SG+ PD VT NTL 
Sbjct: 412 GMELLHEMPR-RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 470

Query: 178 RAYAQYGETYRAEQMLFEMQN-----------NQVRPNERTCGIIVSGYCKEGNMEDAMR 226
                 G+   A +M   MQ            N V P+  T  I++ G   EG   +A  
Sbjct: 471 DGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEE 530

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
               M    + P+ + ++S+I G       D   +    M      P+VVTF+T+++ + 
Sbjct: 531 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYC 590

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
            AG +    E+F +M + GI  D  ++  L  G+ + G    A  I   M   GV+P+ +
Sbjct: 591 KAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTI 650

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKM 371
               +++G+ +  +++RA+++ E +
Sbjct: 651 TIRNMLTGFWSKEELERAVAMLEDL 675



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/442 (24%), Positives = 192/442 (43%), Gaps = 41/442 (9%)

Query: 43  KRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS--------- 93
           K  +  + L S + +    P  I FN ++ A       D  + ++QKM+           
Sbjct: 60  KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119

Query: 94  --------------------------GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
                                     G  P   T+ TL+ G     +  E+L L      
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFH---- 175

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            +  +P+  T+  L+   C +  + EA  ++ +MV +G+QPD +TY T      + G+T 
Sbjct: 176 -QICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTV 234

Query: 188 RAEQMLFEMQN-NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            A  +L +M+  + ++PN      I+ G CK+G   D+      M++  + PN+V +N +
Sbjct: 235 SALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCM 294

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I GF          + L  M E  + P+VVT++ +++A+   G   +  E++D+M+  GI
Sbjct: 295 IGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGI 354

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+   ++ +  G+ +      AE +   M   G  P+V  FTT+I G+C A ++   M 
Sbjct: 355 IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGME 414

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           +  +M   G+  N  TY TL+ G+        A +L Q M   GV P   T   + D   
Sbjct: 415 LLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 474

Query: 427 AIGLAREAKRVLKSAEEDRQSM 448
             G  ++A  + K+ ++ +  +
Sbjct: 475 DNGKLKDALEMFKAMQKSKMDL 496



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 180/377 (47%), Gaps = 13/377 (3%)

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           E   +++A+ +F  M  S   P+   +N L+     + +P+  + L Q M + K ++ + 
Sbjct: 58  EIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMER-KQIRCDI 116

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            ++ IL++ +CS + +  A +   K+   G+ PD VT+ TL          +R  + L +
Sbjct: 117 YSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCL---DHRVSEAL-D 172

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           + +   RP+  T   +++G C+EG + +A+  L RM E  + P+ + + + + G   + D
Sbjct: 173 LFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGD 232

Query: 256 SDGVDKALTLMEEFG-VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           +      L  MEE   +KP+VV +S I+D     G       +F +M   GI P+I  ++
Sbjct: 233 TVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYN 292

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            +  G+  +G    A+ +L  M +  + PNVV +  +I+ +    K   A  +Y++M   
Sbjct: 293 CMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR 352

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           GI PN  TY +++ G+ +  +   AE++  +M  KG  P   T   + D +        A
Sbjct: 353 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCG------A 406

Query: 435 KRVLKSAEEDRQSMPNK 451
           KR+     E    MP +
Sbjct: 407 KRI-DDGMELLHEMPRR 422



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 161/351 (45%), Gaps = 18/351 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N  V +GK  EA  +++ ++  G  P  ITY +++    +Q R  +   +   +   G 
Sbjct: 330 INAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGC 389

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   F  +I+    +  +D+ M++  +M   G    T TYNTLI G+  VG    +L 
Sbjct: 390 SPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALD 449

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS-----------GIQPD 169
           L Q M     V P+  T N L+   C    +++A  +   M  S           G++PD
Sbjct: 450 LSQQMIS-SGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPD 508

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
            +TYN L       G+   AE++  EM +  + P+  T   ++ G CK+  +++A +   
Sbjct: 509 VLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFV 568

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWS 286
            M      PN+V FN+LI G+     +  VD  L L  E    G+  D + + T++  + 
Sbjct: 569 SMGSKSFSPNVVTFNTLINGYC---KAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFR 625

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
             G +    +IF +M+ +G+ PD      +  G+    E ++A ++L  ++
Sbjct: 626 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 231/457 (50%), Gaps = 23/457 (5%)

Query: 1    MNILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
             NIL+      G   +A  +F  ++ +  +P ++T+  L+  L +  + ++   ++  + 
Sbjct: 570  FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMG 629

Query: 57   KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
              G+ P+ + +NA+++   +SG ++EA +  ++M  SGC P + TY +L+       + +
Sbjct: 630  NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTD 689

Query: 117  ESLKLLQLMSQDKNV--KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYN 174
            ++L   QL+S+ K+    P+  TYNILV         E+A  V+ +MV  G  PD VTYN
Sbjct: 690  DAL---QLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYN 746

Query: 175  TLARAYAQYGETYRAEQMLFEMQNNQVR---PNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
            TL  +  + G+   A ++  +M +   R   PN  T  ++++G CK G +++A   +  M
Sbjct: 747  TLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEM 806

Query: 232  --KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG-----VKPDVVTFSTIMDA 284
              K  +V PN++ +NS + G         + +A  LM         V PD VTFST++D 
Sbjct: 807  MRKSCDVLPNIITYNSFLDGLCK---QSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDG 863

Query: 285  WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
                G   +   +FDDM+  G  P++  +++L  G  +  + ++A +++ SM   GV P+
Sbjct: 864  LCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPD 923

Query: 345  VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
            V+ ++ ++  +C A  +  A+ +   M   G  PN+ T+ +++ G  ++ Q   A ++  
Sbjct: 924  VITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFD 983

Query: 405  VMEEK-GVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
             M  K G+ P K T   + D     G A +A+ +L +
Sbjct: 984  DMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDA 1020



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 206/431 (47%), Gaps = 14/431 (3%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  L+E GH P ++TY TL+ +L +    +    L   +      P+ + ++ +IN   
Sbjct: 238 LFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLC 297

Query: 76  ESGNVDEAMKIFQKMKDSGCK--PTTSTYNTLIKGYGNVGKPEESLKLLQ-LMSQDKNVK 132
           + G +DEA ++ Q+M    C   P   TYN+ + G        E+ +L++ L      V 
Sbjct: 298 KVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVS 357

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+  T++ L+   C    I+EA +V   M+A G  P+ +TYN L     +  +  RA  M
Sbjct: 358 PDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAM 417

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           +  M +  V P+  T  ++V  +CK   +++A+  L+ M      PN+V FNS+I G   
Sbjct: 418 IESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLC- 476

Query: 253 IKDSDGVDKALTLMEEFGVK----PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
              SD   +A  + ++  +K    PD +T+ T++D     G  G+ + + D M     +P
Sbjct: 477 --KSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP----DP 530

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D + F+    G  + G+  +A  +   M +  + P+ V F  +I+G C A   ++A +++
Sbjct: 531 DTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALF 590

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           E+M    + P++ T+  L+ G  +A Q   A ++L +M   GV P   T   +       
Sbjct: 591 EEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKS 650

Query: 429 GLAREAKRVLK 439
           G   EA + L+
Sbjct: 651 GRIEEACQFLE 661



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/478 (25%), Positives = 215/478 (44%), Gaps = 48/478 (10%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F+ +I  G+ P +ITY  LV  L +  + +   ++I  +   G+ PD I +
Sbjct: 374 GQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITY 433

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +++A  ++  VDEA+++   M   GC P   T+N++I G     +  E+ ++   M+ 
Sbjct: 434 SVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMAL 493

Query: 128 DKNVKPNDRTYNILVRAW-------------------------CSKN------SIEEAWN 156
              + P+  TY  L+                            C  N       +  A  
Sbjct: 494 KHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQ 553

Query: 157 VVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
           V  +M+   + PD VT+N L     + G   +A  +  EM    ++P+  T G ++ G C
Sbjct: 554 VYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLC 613

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKP 273
           K G +E A   L  M  L V PN+V +N+L+ G      S  +++A   +EE    G  P
Sbjct: 614 KAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCK---SGRIEEACQFLEEMVSSGCVP 670

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           D +T+ +++ A   A       ++  ++   G +PD   ++IL  G  ++G+ ++A ++L
Sbjct: 671 DSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVL 730

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM------CEIGINPNLKTYETLL 387
             M   G HP+VV + T+I   C A  ++ A  ++  M      C +   PN+ TY  L+
Sbjct: 731 EEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCV---PNVVTYSVLI 787

Query: 388 WGYGEAKQPWRAEELLQVMEEKG--VRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            G  +  +   A EL+Q M  K   V P   T     D      +  EA  +++S  +
Sbjct: 788 NGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRD 845



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 202/411 (49%), Gaps = 30/411 (7%)

Query: 2    NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQ------KRFKSILSL 51
            NILV      G+  +A  +   ++ +GH P ++TY TL+ +L +       +R    +S 
Sbjct: 711  NILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMS- 769

Query: 52   ISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCK--PTTSTYNTLIKGY 109
             S+V +  + P+ + ++ +IN   + G +DEA ++ Q+M    C   P   TYN+ + G 
Sbjct: 770  -SRVSRCCV-PNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGL 827

Query: 110  GNVGKPEESLKLLQ-LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP 168
                   E+ +L++ L      V P+  T++ L+   C     +EA NV   M+A G  P
Sbjct: 828  CKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVP 887

Query: 169  DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
            + VTYN L     +  +  RA  M+  M +  V P+  T  ++V  +CK  ++++A+  L
Sbjct: 888  NVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELL 947

Query: 229  YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF----GVKPDVVTFSTIMDA 284
            + M      PN+V FNS+I G      SD   +A  + ++     G+ PD +T+ T++D 
Sbjct: 948  HGMASRGCTPNVVTFNSIIDGLCK---SDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDG 1004

Query: 285  WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
                G  G+ + + D M     +PD + F+    G  + G+  +A   L  M +  + P+
Sbjct: 1005 LFRTGWAGQAEVLLDAMP----DPDTYAFNCCINGLSKLGDVSRA---LHRMLELELVPD 1057

Query: 345  VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
             V F  +I+G C A   ++A +++E+M    + P++ T+  L+ G  +A Q
Sbjct: 1058 KVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 1108



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/448 (24%), Positives = 204/448 (45%), Gaps = 47/448 (10%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+LV  G P +A  +F   +    RP   TY+TL+ A  +                   
Sbjct: 118 LNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKA------------------ 159

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
                            G+V+  +  F++++ S    + + YN +++     G+   +L+
Sbjct: 160 ----------------GGDVERTLGFFRRIRSS--SRSVADYNIVLQSLCRAGETARALE 201

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + +       V P   TYN ++   C  N +     +  ++V  G  PD VTYNTL  + 
Sbjct: 202 IFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSL 261

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM--KELEVHP 238
            + G+   A ++  +M +    PN  T  ++++G CK G +++A   +  M  K  +V P
Sbjct: 262 CKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLP 321

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG-----VKPDVVTFSTIMDAWSSAGLMGK 293
           N++ +NS + G           +A  LM         V PD VTFST++D     G + +
Sbjct: 322 NIITYNSFLDGLCK---QSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDE 378

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
              +FDDM+  G  P++  ++ L  G  +A + ++A +++ SM   GV P+V+ ++ ++ 
Sbjct: 379 ACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVD 438

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK-GVR 412
            +C A ++  A+ +   M   G  PN+ T+ +++ G  ++ +   A ++   M  K G+ 
Sbjct: 439 AFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLV 498

Query: 413 PKKSTIQLVADSWRAIGLAREAKRVLKS 440
           P K T   + D     G A +A+ +L +
Sbjct: 499 PDKITYCTLIDGLFRTGRAGQAEALLDA 526



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 152/311 (48%), Gaps = 13/311 (4%)

Query: 27   PTLITYTTLVAALTRQKRFKSILSLISKVEKDG---MKPDSILFNAMINACSESGNVDEA 83
            P +ITY + +  L +Q        L+  + +DG   + PD++ F+ +I+   + G  DEA
Sbjct: 815  PNIITYNSFLDGLCKQSMMAEACELMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQTDEA 873

Query: 84   MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
              +F  M   G  P   TYN L+ G     K E +  +++ M  DK V P+  TY++LV 
Sbjct: 874  CNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMV-DKGVTPDVITYSVLVD 932

Query: 144  AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ-NNQVR 202
            A+C  + ++EA  +++ M + G  P+ VT+N++     +  ++  A QM  +M   + + 
Sbjct: 933  AFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLA 992

Query: 203  PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
            P++ T   ++ G  + G    A   L  M +    P+   FN  I G   + D   V +A
Sbjct: 993  PDKITYCTLIDGLFRTGWAGQAEVLLDAMPD----PDTYAFNCCINGLSKLGD---VSRA 1045

Query: 263  LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
            L  M E  + PD VTF+ ++     AG   +   +F++MV   ++PD+  F  L  G  +
Sbjct: 1046 LHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCK 1105

Query: 323  AGEPQKAESIL 333
            AG+ +    I+
Sbjct: 1106 AGQVEATWDIM 1116



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 9/223 (4%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            MN L    K   AH +   ++++G  P +ITY+ LV A  +       L L+  +   G 
Sbjct: 896  MNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGC 955

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMK-DSGCKPTTSTYNTLIKGYGNVGKPEESL 119
             P+ + FN++I+   +S    EA ++F  M    G  P   TY TLI G    G   ++ 
Sbjct: 956  TPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAE 1015

Query: 120  KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
             LL  M       P+   +N  +        +  A   +++M+   + PD VT+N L   
Sbjct: 1016 VLLDAMPD-----PDTYAFNCCINGLSKLGDVSRA---LHRMLELELVPDKVTFNILIAG 1067

Query: 180  YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNME 222
              + G   +A  +  EM    ++P+  T G ++ G CK G +E
Sbjct: 1068 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 216/453 (47%), Gaps = 43/453 (9%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV  GK  +A  +   ++ +G  P ++TY++L+  L +  +     +L+ ++ + G  P+
Sbjct: 230 LVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPN 289

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +I+   + G +DEA  + ++M D GC+P   TY  L+  +   GK E+++ L++
Sbjct: 290 IVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVE 349

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           +M + K   PN  TYN L+  +C K+ +E A  ++  M+  G  P+ V+YNT+     + 
Sbjct: 350 VMVE-KGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKA 408

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            + +    +L +M +N   P+  T   I+   CK   ++ A      ++E    PNLV +
Sbjct: 409 TKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTY 468

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF----GVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           NSL+ G      S   D+A  L+ E     G  PD++T++T++D    +  + +  ++F 
Sbjct: 469 NSLVHGLC---KSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFL 525

Query: 300 DMVKAGIEPDIHVFSI-----------------------------------LAKGYVRAG 324
            M+  G+ PD   +SI                                   L  G+ + G
Sbjct: 526 QMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTG 585

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              KA  IL  +   G +P+VV F+  I       ++++A  + E M   G+ P+  TY 
Sbjct: 586 NLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYN 645

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           TLL G+ +A +   A +L +VM + G  P  +T
Sbjct: 646 TLLKGFCDASRTEDAVDLFEVMRQCGCEPDNAT 678



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 210/402 (52%), Gaps = 8/402 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G  P + +Y T++    +  R ++ L L+ ++   G  PD + +  +IN   +   
Sbjct: 70  MVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQ 129

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           VDEA ++  KM   GC+P   TY TL+ G+  VG  + +++L++ M++ +  +PN  TYN
Sbjct: 130 VDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTE-RGYRPNAITYN 188

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASG-IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
            ++   CS   ++ A  +  +M  SG   PD  TY+T+  +  + G+   A +++  M +
Sbjct: 189 NIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVS 248

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
               PN  T   ++ G CK G +++A   L RM      PN+V +N++I G   +     
Sbjct: 249 KGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGR--- 305

Query: 259 VDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
           +D+A  L+EE    G +P+VVT++ ++DA+   G       + + MV+ G  P++  ++ 
Sbjct: 306 IDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNS 365

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L   + +  E ++A  +L+SM + G  PNVV + TVI+G C A K+   + + E+M    
Sbjct: 366 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 425

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             P++ T+ T++    +  +   A EL  +++E G  P   T
Sbjct: 426 CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVT 467



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 217/442 (49%), Gaps = 3/442 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGH-RPTLITYTTLVAALTRQKRFKSILSLISKVEKDG 59
           M+ L    K   A  +F  + E G   P + TY+T+V +L +  +      L+  +   G
Sbjct: 191 MHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKG 250

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
             P+ + ++++++   ++G +DEA  + Q+M  SGC P   TYNT+I G+  +G+ +E+ 
Sbjct: 251 CSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAY 310

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            LL+ M  D   +PN  TY +L+ A+C     E+A  +V  MV  G  P+  TYN+L   
Sbjct: 311 HLLEEMV-DGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDM 369

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + +  E  RA Q+L  M      PN  +   +++G CK   + + +  L +M      P+
Sbjct: 370 FCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPD 429

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +V FN++I         D   +   L++E G  P++VT+++++     +    + + +  
Sbjct: 430 IVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLR 489

Query: 300 DMV-KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           +M  K G  PDI  ++ +  G  ++    +A  +   M   G+ P+ V ++ VIS  C  
Sbjct: 490 EMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKW 549

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
             M  A ++ E M + G +P   TY TL+ G+ +     +A E+LQ++  KG  P   T 
Sbjct: 550 RFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTF 609

Query: 419 QLVADSWRAIGLAREAKRVLKS 440
            +  D     G  R+A  +L++
Sbjct: 610 SIFIDWLSKRGRLRQAGELLET 631



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 229/479 (47%), Gaps = 44/479 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L    +  EA  + + +I+ G +P +ITY TLV    R       + L+ K+ + G 
Sbjct: 121 INGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGY 180

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSG-CKPTTSTYNTLIKGYGNVGKPEESL 119
           +P++I +N +++       +D A+++F++M++SG C P   TY+T++      GK +++ 
Sbjct: 181 RPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDAC 240

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +L++ M   K   PN  TY+ L+   C    ++EA  ++ +M  SG  P+ VTYNT+   
Sbjct: 241 RLVEAMVS-KGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 299

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + + G    A  +L EM +   +PN  T  +++  +CK G  EDA+  +  M E    PN
Sbjct: 300 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN 359

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK--------------------------- 272
           L  +NSL+  F      D V++A  L+     K                           
Sbjct: 360 LFTYNSLLDMFC---KKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVL 416

Query: 273 -----------PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
                      PD+VTF+TI+DA      +    E+F+ + ++G  P++  ++ L  G  
Sbjct: 417 LLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLC 476

Query: 322 RAGEPQKAESILTSM-RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
           ++    +AE +L  M RK G  P+++ + TVI G C + ++ RA  ++ +M   G+ P+ 
Sbjct: 477 KSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDD 536

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            TY  ++    + +    A  +L++M + G  P   T   + D +   G   +A  +L+
Sbjct: 537 VTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQ 595



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 99/399 (24%), Positives = 195/399 (48%), Gaps = 2/399 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P  +TY T++  L++  R    + L+ ++  +G  P+   +N +++   ++  V+ A+ +
Sbjct: 42  PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 101

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            ++M   GC P   +Y T+I G   + + +E+ +++  M Q +  +PN  TY  LV  +C
Sbjct: 102 LEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQ-RGCQPNVITYGTLVDGFC 160

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ-NNQVRPNE 205
               ++ A  +V KM   G +P+A+TYN +        +   A Q+  EM+ +    P+ 
Sbjct: 161 RVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDV 220

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   IV    K G ++DA R +  M      PN+V ++SL+ G       D     L  
Sbjct: 221 FTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQR 280

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M   G  P++VT++TI+D     G + +   + ++MV  G +P++  +++L   + + G+
Sbjct: 281 MTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGK 340

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            + A  ++  M + G  PN+  + +++  +C   +++RA  +   M + G  PN+ +Y T
Sbjct: 341 AEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNT 400

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           ++ G  +A +      LL+ M      P   T   + D+
Sbjct: 401 VIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDA 439



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 192/381 (50%), Gaps = 2/381 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA+++   +++ G +P ++TYT L+ A  +  + +  + L+  + + G  P+   +
Sbjct: 304 GRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTY 363

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N++++   +   V+ A ++   M   GC P   +YNT+I G     K  E + LL+ M  
Sbjct: 364 NSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLS 423

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           + N  P+  T+N ++ A C    ++ A+ +   +  SG  P+ VTYN+L     +     
Sbjct: 424 N-NCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFD 482

Query: 188 RAEQMLFEMQNNQ-VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
           +AE +L EM   Q   P+  T   ++ G CK   ++ A +   +M    + P+ V ++ +
Sbjct: 483 QAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIV 542

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I      +  D  +  L LM + G  P  +T+ T++D +   G + K  EI   ++  G 
Sbjct: 543 ISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGS 602

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD+  FSI      + G  ++A  +L +M + G+ P+ V + T++ G+C+A + + A+ 
Sbjct: 603 YPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVD 662

Query: 367 IYEKMCEIGINPNLKTYETLL 387
           ++E M + G  P+  TY TL+
Sbjct: 663 LFEVMRQCGCEPDNATYTTLV 683



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 178/346 (51%), Gaps = 3/346 (0%)

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M   G K     + ++++G  + G+  +++   + MS  K   P+  TYN ++      +
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMS--KTCPPDSVTYNTMINGLSKSD 58

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            +++A  ++ +MV +G  P+  +YNT+   + +      A  +L +M      P+  +  
Sbjct: 59  RLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYT 118

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            +++G CK   +++A R + +M +    PN++ + +L+ GF  + D DG  + +  M E 
Sbjct: 119 TVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTER 178

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG-IEPDIHVFSILAKGYVRAGEPQK 328
           G +P+ +T++ IM    S   +    ++F +M ++G   PD+  +S +    V++G+   
Sbjct: 179 GYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDD 238

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  ++ +M   G  PNVV +++++ G C A K+  A ++ ++M   G +PN+ TY T++ 
Sbjct: 239 ACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIID 298

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G+ +  +   A  LL+ M + G +P   T  ++ D++   G A +A
Sbjct: 299 GHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDA 344



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 171/352 (48%), Gaps = 35/352 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++   K +   A  + + +I++G  P +++Y T++A L +  +    + L+ ++  +  
Sbjct: 367 LDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNC 426

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + FN +I+A  ++  VD A ++F  +++SGC P   TYN+L+ G     + +++  
Sbjct: 427 VPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEY 486

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M++ +   P+  TYN ++   C    ++ A+ +  +M++ G+ PD VTY+ +  + 
Sbjct: 487 LLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSL 546

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            ++     A  +L  M  N   P   T G ++ G+CK GN++ A+  L            
Sbjct: 547 CKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEIL------------ 594

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
                                   L+   G  PDVVTFS  +D  S  G + +  E+ + 
Sbjct: 595 -----------------------QLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLET 631

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           M++AG+ PD   ++ L KG+  A   + A  +   MR+ G  P+   +TT++
Sbjct: 632 MLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 120/243 (49%), Gaps = 2/243 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKV-EKDGMKPDSILFNAMI 71
           A+ +FN + E G  P L+TY +LV  L + +RF     L+ ++  K G  PD I +N +I
Sbjct: 449 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVI 508

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   +S  VD A K+F +M   G  P   TY+ +I         +E+  +L+LM ++   
Sbjct: 509 DGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKN-GF 567

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P   TY  L+  +C   ++++A  ++  +++ G  PD VT++      ++ G   +A +
Sbjct: 568 DPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGE 627

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L  M    + P+  T   ++ G+C     EDA+     M++    P+   + +L+   +
Sbjct: 628 LLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLV 687

Query: 252 DIK 254
           D K
Sbjct: 688 DKK 690



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 2/150 (1%)

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M + G++    V   + +G   AG+   A      M K    P+ V + T+I+G   + +
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDR 59

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A+ + E+M + G  PN+ +Y T+L G+ +A +   A  LL+ M  +G  P   +   
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           V +    +    EA RV+    + R   PN
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQ-RGCQPN 148


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 222/433 (51%), Gaps = 3/433 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG   EA  + N +  +G  P + TY T++  L +  +++    + +++ + G+ PDS  
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           + +++    + G+V E  K+F  M+     P    +++++  +   G  +++L     + 
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV- 401

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++  + P++  Y IL++ +C K  I  A N+  +M+  G   D VTYNT+     +    
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+++  EM    + P+  T  I++ G+CK GN+++AM    +MKE  +  ++V +N+L
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + GF  + D D   +    M    + P  +++S +++A  S G + +   ++D+M+   I
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           +P + + + + KGY R+G     ES L  M   G  P+ + + T+I G+     M +A  
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641

Query: 367 IYEKMCEI--GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           + +KM E   G+ P++ TY ++L G+    Q   AE +L+ M E+GV P +ST   + + 
Sbjct: 642 LVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701

Query: 425 WRAIGLAREAKRV 437
           + +     EA R+
Sbjct: 702 FVSQDNLTEAFRI 714



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/408 (24%), Positives = 189/408 (46%), Gaps = 7/408 (1%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EAH  F  L  +G   ++     L+ +L R    +    +  ++ + G+  +    N
Sbjct: 180 KLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLN 239

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            M+NA  + G +++      ++++ G  P   TYNTLI  Y + G  EE+ +L+  M   
Sbjct: 240 IMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMP-G 298

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K   P   TYN ++   C     E A  V  +M+ SG+ PD+ TY +L     + G+   
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE 358

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
            E++  +M++  V P+      ++S + + GN++ A+ +   +KE  + P+ V++  LI+
Sbjct: 359 TEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQ 418

Query: 249 GFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           G+        +  A+ L  E    G   DVVT++TI+       ++G+  ++F++M +  
Sbjct: 419 GYC---RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + PD +  +IL  G+ + G  Q A  +   M++  +  +VV + T++ G+     +  A 
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            I+  M    I P   +Y  L+           A  +   M  K ++P
Sbjct: 536 EIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 188/377 (49%), Gaps = 3/377 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG   E   +F+ +      P L+ ++++++  TR       L   + V++ G+ PD+++
Sbjct: 353 KGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +  +I      G +  AM +  +M   GC     TYNT++ G        E+ KL   M+
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + + + P+  T  IL+   C   +++ A  +  KM    I+ D VTYNTL   + + G+ 
Sbjct: 473 E-RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+++  +M + ++ P   +  I+V+  C +G++ +A R    M    + P +++ NS+
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV--KA 304
           IKG+    ++   +  L  M   G  PD ++++T++  +     M K   +   M   + 
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG 651

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+ PD+  ++ +  G+ R  + ++AE +L  M + GV+P+   +T +I+G+ +   +  A
Sbjct: 652 GLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEA 711

Query: 365 MSIYEKMCEIGINPNLK 381
             I+++M + G +P+ K
Sbjct: 712 FRIHDEMLQRGFSPDDK 728



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 187/373 (50%), Gaps = 7/373 (1%)

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           NA+I +    G V+ A  ++Q++  SG      T N ++      GK E+    L  + Q
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQV-Q 262

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +K V P+  TYN L+ A+ SK  +EEA+ ++  M   G  P   TYNT+     ++G+  
Sbjct: 263 EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           RA+++  EM  + + P+  T   ++   CK+G++ +  +    M+  +V P+LV F+S++
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382

Query: 248 KGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
             F     S  +DKAL     ++E G+ PD V ++ ++  +   G++     + ++M++ 
Sbjct: 383 SLF---TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ 439

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G   D+  ++ +  G  +     +A+ +   M +  + P+    T +I G C    +Q A
Sbjct: 440 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNA 499

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           M +++KM E  I  ++ TY TLL G+G+      A+E+   M  K + P   +  ++ ++
Sbjct: 500 MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559

Query: 425 WRAIGLAREAKRV 437
             + G   EA RV
Sbjct: 560 LCSKGHLAEAFRV 572



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/403 (23%), Positives = 179/403 (44%), Gaps = 18/403 (4%)

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKM-KDSG----------------CKPTTSTY 102
            K  S+  +AMI+    SG + +A     +M + SG                C    S +
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVF 168

Query: 103 NTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV 162
           + LI+ Y    K  E+ +   L+ + K    +    N L+ +      +E AW V  ++ 
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLL-RSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227

Query: 163 ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNME 222
            SG+  +  T N +  A  + G+  +    L ++Q   V P+  T   ++S Y  +G ME
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287

Query: 223 DAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIM 282
           +A   +  M      P +  +N++I G       +   +    M   G+ PD  T+ +++
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
                 G + + +++F DM    + PD+  FS +   + R+G   KA     S+++ G+ 
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           P+ V++T +I G+C    +  AM++  +M + G   ++ TY T+L G  + K    A++L
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
              M E+ + P   T+ ++ D    +G  + A  + +  +E R
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR 510


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 209/410 (50%), Gaps = 1/410 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  +A  +F+ ++  G RP + TYTT++  L +     +   L+ K+E+ G 
Sbjct: 175 INWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGC 234

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ + ++ +I++  +   V+EA+ IF  MK  G  P   TYN+LI+G  N  + +E+  
Sbjct: 235 QPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASA 294

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M +  N+ P+  T+N+LV   C +  + EA  V+  M   G++PD VTY++L   Y
Sbjct: 295 LLNEM-RSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGY 353

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           +   E   A ++   M     +P+  +  I+++GYCK   +++A +    M    + PN 
Sbjct: 354 SLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNN 413

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+LI G   +            M   G  P++ T+S ++D +   G  GK   +F  
Sbjct: 414 VSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRA 473

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M     +P++ +++IL     ++G  + A  + + +   G+ PN  ++TT+I+G C    
Sbjct: 474 MQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGL 533

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +  A+  +  M E G  P+  +Y  ++ G+   K   RA +L+  M +KG
Sbjct: 534 LDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKG 583



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 213/426 (50%), Gaps = 8/426 (1%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQ-KRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           FN ++     P +I +T L++A+ +  + + +++SL  ++E  G+ P+    + +IN  S
Sbjct: 85  FNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFS 144

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
               VD A  +  K+   G +PT  T+ TLI     VGK  ++++L   M   +  +P+ 
Sbjct: 145 HLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVA-RGCRPDV 203

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY  ++   C       A  ++ KM  +G QP+ VTY+T+  ++ +      A  +   
Sbjct: 204 YTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSY 263

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL---D 252
           M+   + P+  T   ++ G C     ++A   L  M+ L + P++V FN L+        
Sbjct: 264 MKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGK 323

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           + ++ GV K +T   E GV+PDVVT+S++M  +S    + + +++FD M+  G +PD+  
Sbjct: 324 VSEAQGVLKTMT---EMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFS 380

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++IL  GY +     +A+ +   M   G+ PN V + T+I G C    ++ A ++++ M 
Sbjct: 381 YNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMH 440

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
             G  PNL TY  LL G+ +     +A  L + M+    +P      ++ D+    G  R
Sbjct: 441 TNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLR 500

Query: 433 EAKRVL 438
           +A+++ 
Sbjct: 501 DARKLF 506



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 212/439 (48%), Gaps = 5/439 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P + T + L+   +  +R     S+++K+ K G++P  + F  +IN   + G   +A
Sbjct: 128 GLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQA 187

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           M++F  M   GC+P   TY T+I G   +G+   +  LL+ M ++   +PN  TY+ ++ 
Sbjct: 188 MELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKM-EEAGCQPNVVTYSTIID 246

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           +      + EA ++   M   GI PD  TYN+L +    + +   A  +L EM++  + P
Sbjct: 247 SHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMP 306

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T  ++V   CKEG + +A   L  M E+ V P++V ++SL+ G+    +     K  
Sbjct: 307 DIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLF 366

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M   G KPDV +++ +++ +     + + +++F++M+  G+ P+   ++ L  G  + 
Sbjct: 367 DAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQL 426

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G  ++A ++  +M   G  PN+  ++ ++ G+C      +A  ++  M      PNL  Y
Sbjct: 427 GSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMY 486

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             L+    ++     A +L   +  KG++P       + +     GL  EA    ++ EE
Sbjct: 487 NILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEE 546

Query: 444 DRQSMPNKKDEIAVESIHR 462
           D    P   DEI+   I R
Sbjct: 547 D--GCP--PDEISYNVIIR 561



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 206/423 (48%), Gaps = 8/423 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +I+ G +PT++T+TTL+  L +  +F   + L   +   G +PD   +  +IN   + G 
Sbjct: 159 IIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGE 218

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
              A  + +KM+++GC+P   TY+T+I  +    +  E+L +   M + K + P+  TYN
Sbjct: 219 TAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYM-KVKGISPDIFTYN 277

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L++  C+ +  +EA  ++ +M +  I PD VT+N L     + G+   A+ +L  M   
Sbjct: 278 SLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEM 337

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            V P+  T   ++ GY     + +A +    M      P++  +N LI G+  +K  D  
Sbjct: 338 GVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEA 397

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            +    M   G+ P+ V+++T++      G + + + +F +M   G  P++  +SIL  G
Sbjct: 398 KQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDG 457

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           + + G   KA  +  +M+     PN+VM+  +I   C +  ++ A  ++ ++   G+ PN
Sbjct: 458 FCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPN 517

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV-------ADSWRAIGLAR 432
            + Y T++ G  +      A E  + MEE G  P + +  ++        D  RA+ L  
Sbjct: 518 AQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIG 577

Query: 433 EAK 435
           E +
Sbjct: 578 EMR 580



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 190/441 (43%), Gaps = 38/441 (8%)

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +ACS   N+D+A+  F  M      P    +  L+     +G+  +++  L    +   +
Sbjct: 71  DACSFR-NIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGL 129

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PN  T +IL+  +     ++ A++V+ K++  G+QP  VT+ TL     + G+  +A +
Sbjct: 130 SPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAME 189

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV---------- 241
           +  +M     RP+  T   I++G CK G    A   L +M+E    PN+V          
Sbjct: 190 LFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHR 249

Query: 242 -------------------------VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
                                     +NSLI+G  +          L  M    + PD+V
Sbjct: 250 KDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIV 309

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           TF+ ++D     G + + Q +   M + G+EPD+  +S L  GY    E  +A  +  +M
Sbjct: 310 TFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAM 369

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
              G  P+V  +  +I+G+C   ++  A  ++ +M   G+ PN  +Y TL+ G  +    
Sbjct: 370 ITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSL 429

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK-KDEI 455
             A  L + M   G  P   T  ++ D +   G   +A R+ + A +   S PN     I
Sbjct: 430 REARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFR-AMQSTYSKPNLVMYNI 488

Query: 456 AVESIHRKQNLSASNSTFLQI 476
            ++++ +  NL  +   F ++
Sbjct: 489 LIDAMCKSGNLRDARKLFSEL 509



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 139/281 (49%), Gaps = 5/281 (1%)

Query: 1   MNILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
            N+LV     +GK  EA  +   + E G  P ++TY++L+   + +        L   + 
Sbjct: 311 FNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMI 370

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
             G KPD   +N +IN   +   +DEA ++F +M   G  P   +YNTLI G   +G   
Sbjct: 371 TKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLR 430

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           E+  L + M  + N+ PN  TY+IL+  +C +    +A+ +   M ++  +P+ V YN L
Sbjct: 431 EARNLFKNMHTNGNL-PNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNIL 489

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
             A  + G    A ++  E+    ++PN +    I++G CKEG +++A+     M+E   
Sbjct: 490 IDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGC 549

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
            P+ + +N +I+GFL  KD     + +  M + G   DV T
Sbjct: 550 PPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 142/299 (47%), Gaps = 1/299 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  + N +      P ++T+  LV  + ++ +      ++  + + G++PD + +++++
Sbjct: 291 EASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLM 350

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
              S    V EA K+F  M   GCKP   +YN LI GY  V + +E+ +L   M   + +
Sbjct: 351 YGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIH-QGL 409

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PN+ +YN L+   C   S+ EA N+   M  +G  P+  TY+ L   + + G   +A +
Sbjct: 410 TPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFR 469

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +   MQ+   +PN     I++   CK GN+ DA +    +    + PN  ++ ++I G  
Sbjct: 470 LFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLC 529

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
                D   +A   MEE G  PD ++++ I+  +       +  ++  +M   G   D+
Sbjct: 530 KEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADV 588


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 214/408 (52%), Gaps = 1/408 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  KG+  +A +  + L+ +G +   ++Y TL+  + +    ++ +  + K++    KPD
Sbjct: 139 LCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPD 198

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++N +I+A  +   V EA  +F +M   G      TYNTLI G+  VGK +E++ LL 
Sbjct: 199 VVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLN 258

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K + PN  TYNILV A C +  ++EA +V+  M+ + ++PD +TY+TL   Y   
Sbjct: 259 EMVL-KTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLV 317

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E  +A+ +   M    V P+  T  I+++G+CK   +++A+     M +  + P +V +
Sbjct: 318 YEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTY 377

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           +SLI G         V   +  M + G   DV+T+S+++D     G + +   +F+ M  
Sbjct: 378 SSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKD 437

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
             I P+I  F+IL  G  + G  + A+ +   +   G H NV  +  +I+G C    ++ 
Sbjct: 438 QEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEE 497

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           A+++  KM + G  PN  T+ET++    +  +  +AE+LL+ M  +G+
Sbjct: 498 ALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 212/431 (49%), Gaps = 8/431 (1%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G +P LIT   L+       +     S+++K+ K G  PD++  N +I      G V +
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKK 147

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+    K+   G +    +Y TLI G   +G    ++K L+ +   +  KP+   YN ++
Sbjct: 148 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKID-GRLTKPDVVMYNTII 206

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
            A C    + EA+ +  +M   GI  D VTYNTL   +   G+   A  +L EM    + 
Sbjct: 207 DAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTIN 266

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL---DIKDSDGV 259
           PN  T  I+V   CKEG +++A   L  M +  V P+++ +++L+ G+    ++K +  V
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
             A++LM   GV PDV T++ +++ +    ++ +   +F +M +  + P I  +S L  G
Sbjct: 327 FNAMSLM---GVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG 383

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             ++G       ++  MR  G   +V+ ++++I G C    + RA++++ KM +  I PN
Sbjct: 384 LCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPN 443

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + T+  LL G  +  +   A+E+ Q +  KG      T  ++ +     GL  EA  +L 
Sbjct: 444 IFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTML- 502

Query: 440 SAEEDRQSMPN 450
           S  ED   +PN
Sbjct: 503 SKMEDNGCIPN 513



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 142/306 (46%)

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           +N ++ ++        A ++ +++   GIQPD +T N L   +   G+      +L ++ 
Sbjct: 62  FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
                P+  T   ++ G C +G ++ A+ F  ++       N V + +LI G   I D+ 
Sbjct: 122 KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTR 181

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
              K L  ++    KPDVV ++TI+DA     L+ +   +F +M   GI  D+  ++ L 
Sbjct: 182 AAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLI 241

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            G+   G+ ++A  +L  M    ++PNV  +  ++   C   K++ A S+   M +  + 
Sbjct: 242 YGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVK 301

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           P++ TY TL+ GY    +  +A+ +   M   GV P   T  ++ + +    +  EA  +
Sbjct: 302 PDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNL 361

Query: 438 LKSAEE 443
            K   +
Sbjct: 362 FKEMHQ 367



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 133/312 (42%), Gaps = 46/312 (14%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NILV     +GK  EA  +   +++   +P +ITY+TL+         K    + + +  
Sbjct: 273 NILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL 332

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+ PD   +  +IN   ++  VDEA+ +F++M      P   TY++LI G         
Sbjct: 333 MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG--------- 383

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
                                       C    I   W+++ +M   G   D +TY++L 
Sbjct: 384 ---------------------------LCKSGRISYVWDLIDEMRDRGQPADVITYSSLI 416

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               + G   RA  +  +M++ ++RPN  T  I++ G CK G ++DA      +     H
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 476

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            N+  +N +I G         +++ALT+   ME+ G  P+  TF TI+ A        K 
Sbjct: 477 LNVYTYNVMINGHC---KQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKA 533

Query: 295 QEIFDDMVKAGI 306
           +++   M+  G+
Sbjct: 534 EKLLRQMIARGL 545



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 35/254 (13%)

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
           N++DA+    RM  +   P ++ FN ++  F  +K           +E  G++PD++T +
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA---------- 329
            +++ +   G +     +   ++K G  PD    + L KG    G+ +KA          
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 330 ---------ESILTSMRKYG----------------VHPNVVMFTTVISGWCNAVKMQRA 364
                     +++  + K G                  P+VVM+ T+I   C    +  A
Sbjct: 159 GFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEA 218

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             ++ +M   GI+ ++ TY TL++G+    +   A  LL  M  K + P   T  ++ D+
Sbjct: 219 YGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278

Query: 425 WRAIGLAREAKRVL 438
               G  +EAK VL
Sbjct: 279 LCKEGKVKEAKSVL 292


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 223/444 (50%), Gaps = 19/444 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK-DG 59
           MN L  +G+  EA  + + ++E G +P  ITY T V  + +     S L+L+ K+E+   
Sbjct: 189 MNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISH 248

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +KP+ ++++A+I+   + G   ++  +F +M+D G  P   TYN +I G+   G+   + 
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +LLQ M + K + PN  TYN L+ A+  +    EA  +  +M+  GI P+ +TYN++   
Sbjct: 309 RLLQEMLERK-ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG 367

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + +      AE M + M      P+  T   ++ GYC    ++D M  L+ M    +  N
Sbjct: 368 FCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN 427

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            V +N+LI GF  + D   ++ AL L ++    GV PD+VT +T++D     G +    E
Sbjct: 428 TVTYNTLIHGFCLVGD---LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 484

Query: 297 IFDDMVKA-----------GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
           +F  M K+           G+EPD+  ++IL  G +  G+  +AE +   M   G+ P+ 
Sbjct: 485 MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT 544

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
           + ++++I G C   ++  A  ++  M     +PN+ T+ TL+ GY +A +     EL   
Sbjct: 545 ITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCE 604

Query: 406 MEEKGVRPKKSTIQLVADSWRAIG 429
           M  +G+         +   +R +G
Sbjct: 605 MGRRGIVADAIIYITLIYGFRKVG 628



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 209/446 (46%), Gaps = 22/446 (4%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           F  L + G  P ++T+TTL+  L    R    L L  ++     +PD + F  ++N    
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCR 194

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
            G V EA+ +  +M ++G +P   TY T + G   +G    +L LL+ M +  ++KPN  
Sbjct: 195 EGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVV 254

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
            Y+ ++   C      ++ N+  +M   GI P+ VTYN +   +   G    A+++L EM
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
              ++ PN  T   +++ + KEG   +A      M    + PN + +NS+I GF      
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 374

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           D  +    LM   G  PDV TF+T++D +  A  +    E+  +M + G+  +   ++ L
Sbjct: 375 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 434

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI-- 374
             G+   G+   A  +   M   GV P++V   T++ G C+  K++ A+ +++ M +   
Sbjct: 435 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 375 ---------GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
                    G+ P++ TY  L+ G     +   AEEL + M  +G+ P   T   + D  
Sbjct: 495 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID-- 552

Query: 426 RAIGLAREAKRVLKSAEEDRQSMPNK 451
              GL ++++  L  A +   SM +K
Sbjct: 553 ---GLCKQSR--LDEATQMFVSMGSK 573



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/440 (24%), Positives = 213/440 (48%), Gaps = 32/440 (7%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  ++H +F  + ++G  P ++TY  ++       R+ +   L+ ++ +  + P+
Sbjct: 263 LCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPN 322

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +NA+INA  + G   EA +++ +M   G  P T TYN++I G+    + + +  +  
Sbjct: 323 VVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFY 382

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           LM+  K   P+  T+  L+  +C    I++   ++++M   G+  + VTYNTL   +   
Sbjct: 383 LMAT-KGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLV 441

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A  +  +M ++ V P+  TC  ++ G C  G ++DA+                +F
Sbjct: 442 GDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE---------------MF 486

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            ++ K  +D+  S   +         GV+PDV+T++ ++    + G   + +E++++M  
Sbjct: 487 KAMQKSKMDLDASHPFN---------GVEPDVLTYNILICGLINEGKFLEAEELYEEMPH 537

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GI PD   +S +  G  +     +A  +  SM      PNVV F T+I+G+C A ++  
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDD 597

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ-LVA 422
            + ++ +M   GI  +   Y TL++G+ +      A ++ Q M   GV P   TI+ ++ 
Sbjct: 598 GLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 657

Query: 423 DSW------RAIGLAREAKR 436
             W      RA+ +  + +R
Sbjct: 658 GFWSKEELERAVAMLEDLQR 677



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 204/441 (46%), Gaps = 30/441 (6%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           R  + ++T L+       +    LS   K+ K G+ PD + F  +++       V EA+ 
Sbjct: 113 RCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALD 172

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +F ++    C+P   T+ TL+ G    G+  E++ LL  M ++  ++P+  TY   V   
Sbjct: 173 LFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVEN-GLQPDQITYGTFVDGM 227

Query: 146 CSKNSIEEAWNVVYKM-VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           C       A N++ KM   S I+P+ V Y+ +     + G    +  +  EMQ+  + PN
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPN 287

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   ++ G+C  G    A R L  M E ++ PN+V +N+LI  F  +K+    + A  
Sbjct: 288 IVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAF--VKEGKFFEAA-E 344

Query: 265 LMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           L +E    G+ P+ +T+++++D +     +   +++F  M   G  PD+  F+ L  GY 
Sbjct: 345 LYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYC 404

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
            A        +L  M + G+  N V + T+I G+C    +  A+ + ++M   G+ P++ 
Sbjct: 405 GAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIV 464

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEK-----------GVRPKKSTIQLVADSWRAIGL 430
           T  TLL G  +  +   A E+ + M++            GV P   T  ++       GL
Sbjct: 465 TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL-----ICGL 519

Query: 431 AREAKRVLKSAEEDRQSMPNK 451
             E K +   AEE  + MP++
Sbjct: 520 INEGKFL--EAEELYEEMPHR 538



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 182/385 (47%), Gaps = 16/385 (4%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N ++G     G+   A  +   ++E    P ++TY  L+ A  ++ +F     L  ++  
Sbjct: 292 NCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLP 351

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+ P++I +N+MI+   +   +D A  +F  M   GC P   T+ TLI GY    + ++
Sbjct: 352 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 411

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
            ++LL  M + + +  N  TYN L+  +C    +  A ++  +M++SG+ PD VT NTL 
Sbjct: 412 GMELLHEMPR-RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 470

Query: 178 RAYAQYGETYRAEQMLFEMQN-----------NQVRPNERTCGIIVSGYCKEGNMEDAMR 226
                 G+   A +M   MQ            N V P+  T  I++ G   EG   +A  
Sbjct: 471 DGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEE 530

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
               M    + P+ + ++S+I G       D   +    M      P+VVTF+T+++ + 
Sbjct: 531 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYC 590

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
            AG +    E+F +M + GI  D  ++  L  G+ + G    A  I   M   GV+P+ +
Sbjct: 591 KAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTI 650

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKM 371
               +++G+ +  +++RA+++ E +
Sbjct: 651 TIRNMLTGFWSKEELERAVAMLEDL 675



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/437 (24%), Positives = 194/437 (44%), Gaps = 31/437 (7%)

Query: 43  KRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTY 102
           K  +  + L S + +    P  I FN ++ A       D  + ++QKM+    +    ++
Sbjct: 60  KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119

Query: 103 NTLIKGYGNVGKPEESLK-------------------LLQLMSQDKNV-----------K 132
             LIK + +  K   +L                    LL  +  D  V           +
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR 179

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+  T+  L+   C +  + EA  ++ +MV +G+QPD +TY T      + G+T  A  +
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239

Query: 193 LFEMQN-NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           L +M+  + ++PN      I+ G CK+G   D+      M++  + PN+V +N +I GF 
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                    + L  M E  + P+VVT++ +++A+   G   +  E++D+M+  GI P+  
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++ +  G+ +      AE +   M   G  P+V  FTT+I G+C A ++   M +  +M
Sbjct: 360 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
              G+  N  TY TL+ G+        A +L Q M   GV P   T   + D     G  
Sbjct: 420 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 479

Query: 432 REAKRVLKSAEEDRQSM 448
           ++A  + K+ ++ +  +
Sbjct: 480 KDALEMFKAMQKSKMDL 496



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 172/351 (49%), Gaps = 6/351 (1%)

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           E   +++A+ +F  M  S   P+   +N L+     + +P+  + L Q M + K ++ + 
Sbjct: 58  EIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMER-KQIRCDI 116

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            ++ IL++ +CS + +  A +   K+   G+ PD VT+ TL          +R  + L +
Sbjct: 117 YSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCL---DHRVSEAL-D 172

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           + +   RP+  T   +++G C+EG + +A+  L RM E  + P+ + + + + G   + D
Sbjct: 173 LFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGD 232

Query: 256 SDGVDKALTLMEEFG-VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           +      L  MEE   +KP+VV +S I+D     G       +F +M   GI P+I  ++
Sbjct: 233 TVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYN 292

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            +  G+  +G    A+ +L  M +  + PNVV +  +I+ +    K   A  +Y++M   
Sbjct: 293 CMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR 352

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           GI PN  TY +++ G+ +  +   AE++  +M  KG  P   T   + D +
Sbjct: 353 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGY 403



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 163/353 (46%), Gaps = 18/353 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N  V +GK  EA  +++ ++  G  P  ITY +++    +Q R  +   +   +   G 
Sbjct: 330 INAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGC 389

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   F  +I+    +  +D+ M++  +M   G    T TYNTLI G+  VG    +L 
Sbjct: 390 SPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALD 449

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS-----------GIQPD 169
           L Q M     V P+  T N L+   C    +++A  +   M  S           G++PD
Sbjct: 450 LSQQMIS-SGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPD 508

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
            +TYN L       G+   AE++  EM +  + P+  T   ++ G CK+  +++A +   
Sbjct: 509 VLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFV 568

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWS 286
            M      PN+V FN+LI G+     +  VD  L L  E    G+  D + + T++  + 
Sbjct: 569 SMGSKSFSPNVVTFNTLINGYC---KAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFR 625

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
             G +    +IF +M+ +G+ PD      +  G+    E ++A ++L  +++Y
Sbjct: 626 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRY 678



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 147/305 (48%), Gaps = 10/305 (3%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F  +  +G  P + T+TTL+      KR    + L+ ++ + G+  +++ +N +I+
Sbjct: 377 AEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIH 436

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK--- 129
                G+++ A+ + Q+M  SG  P   T NTL+ G  + GK +++L++ + M + K   
Sbjct: 437 GFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDL 496

Query: 130 -------NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
                   V+P+  TYNIL+    ++    EA  +  +M   GI PD +TY+++     +
Sbjct: 497 DASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCK 556

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                 A QM   M +    PN  T   +++GYCK G ++D +     M    +  + ++
Sbjct: 557 QSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAII 616

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           + +LI GF  + + +G       M   GV PD +T   ++  + S   + +   + +D+ 
Sbjct: 617 YITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676

Query: 303 KAGIE 307
           +  +E
Sbjct: 677 RYQLE 681



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 4/178 (2%)

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           P V+ F+ +M A            ++  M +  I  DI+ F+IL K +    +   A S 
Sbjct: 79  PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 138

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              + K G+HP+VV FTT++ G C   ++  A+ ++ ++C     P++ T+ TL+ G   
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMNGLCR 194

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
             +   A  LL  M E G++P + T     D    +G    A  +L+  EE     PN
Sbjct: 195 EGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPN 252



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 102/231 (44%), Gaps = 6/231 (2%)

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           +EDA+     M      P+++ FN L+   + ++  D V      ME   ++ D+ +F+ 
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++  + S   +      F  + K G+ PD+  F+ L  G        +A  +   +    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
             P+V+ FTT+++G C   ++  A+++ ++M E G+ P+  TY T + G  +      A 
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 401 ELLQVMEE-KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            LL+ MEE   ++P       + D     G   ++  +     +D+   PN
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEM-QDKGIFPN 287


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 219/434 (50%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N LV  G+ H AHY++  +I  G  P +   + +V A  +  +       + K+E  G+
Sbjct: 164 LNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGV 223

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ + ++++IN     G+V+ A  + + M + G      TY  LIKGY    K +E+ K
Sbjct: 224 EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEK 283

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+ M ++  + P++R Y +L+  +C    I++A  ++ +M+  G++ +    N+L   Y
Sbjct: 284 VLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGY 343

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + GE + AE ++  M +  ++P+  +   ++ GYC+EG+  +A     +M +  + P +
Sbjct: 344 CKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTV 403

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +N+L+KG   +   D   +   LM + GV PD V +ST++D             ++ D
Sbjct: 404 LTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKD 463

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           ++  G       F+ +  G  + G+  +AE I   M+  G  P+ + + T+I G+C A  
Sbjct: 464 ILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASN 523

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           + +A  +   M    I+P+++ Y +L+ G  ++++     +LL  M  +G+ P   T   
Sbjct: 524 VGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGA 583

Query: 421 VADSWRAIGLAREA 434
           + D W   G+  +A
Sbjct: 584 LIDGWCKEGMLDKA 597



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 217/415 (52%), Gaps = 4/415 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + + V KG    A Y+F+ + + G  P+L +  +L+  L +     +   +  ++ + G+
Sbjct: 129 LKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGI 188

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD  + + M+NA  + G VDEA    +KM++ G +P   TY++LI GY ++G  E +  
Sbjct: 189 VPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKG 248

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV-ASGIQPDAVTYNTLARA 179
           +L+ MS+ K V  N  TY +L++ +C +  ++EA  V+  M   + + PD   Y  L   
Sbjct: 249 VLKFMSE-KGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDG 307

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           Y + G+   A ++L EM    ++ N   C  +++GYCK G + +A   + RM +  + P+
Sbjct: 308 YCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPD 367

Query: 240 LVVFNSLIKGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
              +N+L+ G+  +   S+  +    +++E G++P V+T++T++      G      +I+
Sbjct: 368 SYSYNTLLDGYCREGHTSEAFNLCDKMLQE-GIEPTVLTYNTLLKGLCRVGAFDDALQIW 426

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
             M+K G+ PD   +S L  G  +    + A ++   +   G   + + F T+ISG C  
Sbjct: 427 HLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKM 486

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            KM  A  I++KM ++G +P+  TY TL+ GY +A    +A ++   ME + + P
Sbjct: 487 GKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISP 541



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 188/406 (46%), Gaps = 33/406 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  I++ +++ G  P  + Y+TL+  L + + F+   +L   +   G     I F
Sbjct: 417 GAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 476

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N MI+   + G + EA +IF KMKD GC P   TY TLI GY       ++ K+   M +
Sbjct: 477 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 536

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  + P+   YN L+        + E  +++ +M   G+ P+ VTY  L   + + G   
Sbjct: 537 EP-ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD 595

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE-------------- 233
           +A    FEM  N +  N   C  +VSG  + G +++A   + +M +              
Sbjct: 596 KAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSD 655

Query: 234 ------------------LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
                               + PN +V+N  I G       D   +  +++   G  PD 
Sbjct: 656 IRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 715

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
            T+ T++  +S+AG + +   + D+M++ G+ P+I  ++ L  G  ++    +A+ +   
Sbjct: 716 FTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHK 775

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           + + G+ PNVV + T+I G+C    M  A  + +KM E GI+P+++
Sbjct: 776 LHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSIQ 821



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 196/442 (44%), Gaps = 33/442 (7%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  + + ++  G +  L    +L+    ++        +I+++    +KPDS  +
Sbjct: 312 GKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSY 371

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +++     G+  EA  +  KM   G +PT  TYNTL+KG   VG  +++L++  LM +
Sbjct: 372 NTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMK 431

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + V P++  Y+ L+       + E A  +   ++A G     +T+NT+     + G+  
Sbjct: 432 -RGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMV 490

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            AE++  +M++    P+  T   ++ GYCK  N+  A +    M+   + P++ ++NSLI
Sbjct: 491 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLI 550

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G    +    V   LT M   G+ P++VT+  ++D W   G++ K    + +M + G+ 
Sbjct: 551 SGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLS 610

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH------------------------- 342
            +I + S +  G  R G   +A  ++  M  +G                           
Sbjct: 611 ANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDE 670

Query: 343 -------PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
                  PN +++   I+G C   K+  A   +  +   G  P+  TY TL+ GY  A  
Sbjct: 671 SCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGN 730

Query: 396 PWRAEELLQVMEEKGVRPKKST 417
              A  L   M  +G+ P   T
Sbjct: 731 VDEAFRLRDEMLRRGLVPNIVT 752



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 148/302 (49%), Gaps = 1/302 (0%)

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
            ++++++ +  K   + A  V   M   G  P   + N+L     + GET+ A  +  +M
Sbjct: 124 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 183

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
               + P+     I+V+ +CK+G +++A  F+ +M+ L V PN+V ++SLI G++ + D 
Sbjct: 184 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 243

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV-KAGIEPDIHVFSI 315
           +     L  M E GV  +VVT++ ++  +     M + +++   M  +A + PD   + +
Sbjct: 244 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 303

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  GY R G+   A  +L  M + G+  N+ +  ++I+G+C   ++  A  +  +M +  
Sbjct: 304 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 363

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           + P+  +Y TLL GY        A  L   M ++G+ P   T   +      +G   +A 
Sbjct: 364 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 423

Query: 436 RV 437
           ++
Sbjct: 424 QI 425



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 112/267 (41%), Gaps = 32/267 (11%)

Query: 194 FEMQNNQVRPNERTCGIIVSGYCK------EGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           F  +    RPN       V  YCK       G M D  R                 N L+
Sbjct: 57  FVSKQQNFRPN-------VKSYCKLVHILSRGRMYDETR--------------AYLNQLV 95

Query: 248 KGFLDIKDSDGV--DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
                 KD   V  D+ + +  EF   P V  F  I+  +   GL      +FD+M K G
Sbjct: 96  D-LCKFKDRGNVIWDELVGVYREFAFSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCG 152

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
             P +   + L    V+ GE   A  +   M + G+ P+V M + +++ +C   K+  A 
Sbjct: 153 RIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAA 212

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
              +KM  +G+ PN+ TY +L+ GY        A+ +L+ M EKGV     T  L+   +
Sbjct: 213 GFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGY 272

Query: 426 RAIGLAREAKRVLKSAEEDRQSMPNKK 452
                  EA++VL+  +E+   +P+++
Sbjct: 273 CKQCKMDEAEKVLRGMQEEAALVPDER 299


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 219/434 (50%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N LV  G+ H AHY++  +I  G  P +   + +V A  +  +       + K+E  G+
Sbjct: 198 LNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGV 257

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ + ++++IN     G+V+ A  + + M + G      TY  LIKGY    K +E+ K
Sbjct: 258 EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEK 317

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+ M ++  + P++R Y +L+  +C    I++A  ++ +M+  G++ +    N+L   Y
Sbjct: 318 VLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGY 377

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + GE + AE ++  M +  ++P+  +   ++ GYC+EG+  +A     +M +  + P +
Sbjct: 378 CKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTV 437

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +N+L+KG   +   D   +   LM + GV PD V +ST++D             ++ D
Sbjct: 438 LTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKD 497

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           ++  G       F+ +  G  + G+  +AE I   M+  G  P+ + + T+I G+C A  
Sbjct: 498 ILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASN 557

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           + +A  +   M    I+P+++ Y +L+ G  ++++     +LL  M  +G+ P   T   
Sbjct: 558 VGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGA 617

Query: 421 VADSWRAIGLAREA 434
           + D W   G+  +A
Sbjct: 618 LIDGWCKEGMLDKA 631



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 217/415 (52%), Gaps = 4/415 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + + V KG    A Y+F+ + + G  P+L +  +L+  L +     +   +  ++ + G+
Sbjct: 163 LKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGI 222

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD  + + M+NA  + G VDEA    +KM++ G +P   TY++LI GY ++G  E +  
Sbjct: 223 VPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKG 282

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV-ASGIQPDAVTYNTLARA 179
           +L+ MS+ K V  N  TY +L++ +C +  ++EA  V+  M   + + PD   Y  L   
Sbjct: 283 VLKFMSE-KGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDG 341

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           Y + G+   A ++L EM    ++ N   C  +++GYCK G + +A   + RM +  + P+
Sbjct: 342 YCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPD 401

Query: 240 LVVFNSLIKGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
              +N+L+ G+  +   S+  +    +++E G++P V+T++T++      G      +I+
Sbjct: 402 SYSYNTLLDGYCREGHTSEAFNLCDKMLQE-GIEPTVLTYNTLLKGLCRVGAFDDALQIW 460

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
             M+K G+ PD   +S L  G  +    + A ++   +   G   + + F T+ISG C  
Sbjct: 461 HLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKM 520

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            KM  A  I++KM ++G +P+  TY TL+ GY +A    +A ++   ME + + P
Sbjct: 521 GKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISP 575



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 203/439 (46%), Gaps = 33/439 (7%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  I++ +++ G  P  + Y+TL+  L + + F+   +L   +   G     I F
Sbjct: 451 GAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 510

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N MI+   + G + EA +IF KMKD GC P   TY TLI GY       ++ K+   M +
Sbjct: 511 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 570

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  + P+   YN L+        + E  +++ +M   G+ P+ VTY  L   + + G   
Sbjct: 571 EP-ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD 629

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE-------------- 233
           +A    FEM  N +  N   C  +VSG  + G +++A   + +M +              
Sbjct: 630 KAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSD 689

Query: 234 ------------------LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
                               + PN +V+N  I G       D   +  +++   G  PD 
Sbjct: 690 IRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 749

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
            T+ T++  +S+AG + +   + D+M++ G+ P+I  ++ L  G  ++    +A+ +   
Sbjct: 750 FTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHK 809

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           + + G+ PNVV + T+I G+C    M  A  + +KM E GI+P++ TY  L+ G  +   
Sbjct: 810 LHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGD 869

Query: 396 PWRAEELLQVMEEKGVRPK 414
             R+ +LL  M + GV  K
Sbjct: 870 IERSMKLLNQMIKAGVDSK 888



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 196/442 (44%), Gaps = 33/442 (7%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  + + ++  G +  L    +L+    ++        +I+++    +KPDS  +
Sbjct: 346 GKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSY 405

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +++     G+  EA  +  KM   G +PT  TYNTL+KG   VG  +++L++  LM +
Sbjct: 406 NTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMK 465

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + V P++  Y+ L+       + E A  +   ++A G     +T+NT+     + G+  
Sbjct: 466 -RGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMV 524

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            AE++  +M++    P+  T   ++ GYCK  N+  A +    M+   + P++ ++NSLI
Sbjct: 525 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLI 584

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G    +    V   LT M   G+ P++VT+  ++D W   G++ K    + +M + G+ 
Sbjct: 585 SGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLS 644

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH------------------------- 342
            +I + S +  G  R G   +A  ++  M  +G                           
Sbjct: 645 ANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDE 704

Query: 343 -------PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
                  PN +++   I+G C   K+  A   +  +   G  P+  TY TL+ GY  A  
Sbjct: 705 SCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGN 764

Query: 396 PWRAEELLQVMEEKGVRPKKST 417
              A  L   M  +G+ P   T
Sbjct: 765 VDEAFRLRDEMLRRGLVPNIVT 786



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/423 (24%), Positives = 197/423 (46%), Gaps = 4/423 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   EA  + + +++EG  PT++TY TL+  L R   F   L +   + K G+ PD + 
Sbjct: 415 EGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVG 474

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +++   +  N + A  +++ +   G   +  T+NT+I G   +GK  E+ ++   M 
Sbjct: 475 YSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKM- 533

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +D    P+  TY  L+  +C  +++ +A+ V   M    I P    YN+L     +    
Sbjct: 534 KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRL 593

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
                +L EM    + PN  T G ++ G+CKEG ++ A    + M E  +  N+++ +++
Sbjct: 594 VEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTM 653

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + G   +   D  +  +  M + G  PD   F   + +      + K  +  D+  K  +
Sbjct: 654 VSGLYRLGRIDEANLLMQKMVDHGFFPDHECF---LKSDIRYAAIQKIADSLDESCKTFL 710

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+  V++I   G  + G+   A    + +   G  P+   + T+I G+  A  +  A  
Sbjct: 711 LPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFR 770

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           + ++M   G+ PN+ TY  L+ G  +++   RA+ L   + +KG+ P   T   + D + 
Sbjct: 771 LRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYC 830

Query: 427 AIG 429
            IG
Sbjct: 831 KIG 833



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 164/342 (47%), Gaps = 31/342 (9%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P++  Y +L++ L + +R   +  L++++   G+ P+ + + A+I+   + G +D+A   
Sbjct: 575 PSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSS 634

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM--------------------- 125
           + +M ++G        +T++ G   +G+ +E+  L+Q M                     
Sbjct: 635 YFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAA 694

Query: 126 ------SQDKNVK----PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
                 S D++ K    PN+  YNI +   C    +++A      +   G  PD  TY T
Sbjct: 695 IQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCT 754

Query: 176 LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
           L   Y+  G    A ++  EM    + PN  T   +++G CK  N++ A R  +++ +  
Sbjct: 755 LIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKG 814

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           + PN+V +N+LI G+  I + D   K    M E G+ P VVT+S +++     G + +  
Sbjct: 815 LFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSM 874

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           ++ + M+KAG++  +  +  L +GY+R+GE QK   +   M 
Sbjct: 875 KLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMH 916



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 148/302 (49%), Gaps = 1/302 (0%)

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
            ++++++ +  K   + A  V   M   G  P   + N+L     + GET+ A  +  +M
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
               + P+     I+V+ +CK+G +++A  F+ +M+ L V PN+V ++SLI G++ + D 
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV-KAGIEPDIHVFSI 315
           +     L  M E GV  +VVT++ ++  +     M + +++   M  +A + PD   + +
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  GY R G+   A  +L  M + G+  N+ +  ++I+G+C   ++  A  +  +M +  
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           + P+  +Y TLL GY        A  L   M ++G+ P   T   +      +G   +A 
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457

Query: 436 RV 437
           ++
Sbjct: 458 QI 459



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 112/267 (41%), Gaps = 32/267 (11%)

Query: 194 FEMQNNQVRPNERTCGIIVSGYCK------EGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           F  +    RPN       V  YCK       G M D  R                 N L+
Sbjct: 91  FVSKQQNFRPN-------VKSYCKLVHILSRGRMYDETR--------------AYLNQLV 129

Query: 248 KGFLDIKDSDGV--DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
                 KD   V  D+ + +  EF   P V  F  I+  +   GL      +FD+M K G
Sbjct: 130 D-LCKFKDRGNVIWDELVGVYREFAFSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCG 186

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
             P +   + L    V+ GE   A  +   M + G+ P+V M + +++ +C   K+  A 
Sbjct: 187 RIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAA 246

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
              +KM  +G+ PN+ TY +L+ GY        A+ +L+ M EKGV     T  L+   +
Sbjct: 247 GFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGY 306

Query: 426 RAIGLAREAKRVLKSAEEDRQSMPNKK 452
                  EA++VL+  +E+   +P+++
Sbjct: 307 CKQCKMDEAEKVLRGMQEEAALVPDER 333


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 232/444 (52%), Gaps = 19/444 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK-DG 59
           MN L  +G+  EA  + + ++E+G +P  ITY T+V  + +     S L+L+ K+E+   
Sbjct: 184 MNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSR 243

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +KP+ ++++A+I+   + G   +A  +F +M++ G  P   TYN +I G+ + G+  E+ 
Sbjct: 244 IKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQ 303

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +LL+ M + K + P+  T+++L+ A   +    EA  +  +M+  GI P+ +TYN++   
Sbjct: 304 RLLREMFERK-MSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDG 362

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           +++      AE+M + M      P+  T  I++ GYC    ++D M+ L+ M    +  N
Sbjct: 363 FSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVAN 422

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            + + +LI GF  + +   ++ AL L++E    GV P+VVT +T++D   + G +    E
Sbjct: 423 TITYTTLIHGFCQLGN---LNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALE 479

Query: 297 IFDDMVKA-----------GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
           +F  M K+            +EPD+  ++IL  G +  G+  +AE +   M   G+ P+ 
Sbjct: 480 MFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDT 539

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
           + + +VI G C   ++  A  +++ M   G +P++ T+ TL+ GY +  +     E+   
Sbjct: 540 ITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCE 599

Query: 406 MEEKGVRPKKSTIQLVADSWRAIG 429
           M  +G+     T + +   +  +G
Sbjct: 600 MGRRGIVANAITYRTLIHGFCQVG 623



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 196/406 (48%), Gaps = 18/406 (4%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A  +F+ + E+G  P L TY  ++       R+     L+ ++ +  M PD + F
Sbjct: 262 GRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTF 321

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +INA  + G   EA +++ +M   G  P T TYN++I G+    + + + ++  LM+ 
Sbjct: 322 SVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMAT 381

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K   P+  T++IL+  +C    +++   ++++M   G+  + +TY TL   + Q G   
Sbjct: 382 -KGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLN 440

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL-----------EV 236
            A  +L EM ++ V PN  TC  ++ G C  G ++DA+     M++            +V
Sbjct: 441 AALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDV 500

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P++  +N LI G ++       ++    M   G+ PD +T+++++D       + +  +
Sbjct: 501 EPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQ 560

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +FD M   G  PD+  F+ L  GY + G       +   M + G+  N + + T+I G+C
Sbjct: 561 MFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFC 620

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
               +  A+ I+++M   G+ P+  T   +L G       W  EEL
Sbjct: 621 QVGNINGALDIFQEMISSGVYPDTITIRNMLTGL------WSKEEL 660



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 209/446 (46%), Gaps = 22/446 (4%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           F  + + G  P+L+T++TL+  L  + R    L    ++     KP+ I F  ++N    
Sbjct: 134 FGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI----CKPNVIAFTTLMNGLCR 189

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
            G V EA+ +  +M + G +P   TY T++ G   +G    +L LL+ M +   +KPN  
Sbjct: 190 EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVV 249

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
            Y+ ++          +A N+  +M   GI P+  TYN +   +   G    A+++L EM
Sbjct: 250 IYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREM 309

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
              ++ P+  T  ++++   KEG   +A      M    + PN + +NS+I GF      
Sbjct: 310 FERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRL 369

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           D  ++   LM   G  PDV+TFS ++D +  A  +    ++  +M + G+  +   ++ L
Sbjct: 370 DAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTL 429

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI-- 374
             G+ + G    A  +L  M   GV PNVV   T++ G CN  K++ A+ +++ M +   
Sbjct: 430 IHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKM 489

Query: 375 ---------GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
                     + P+++TY  L+ G     +   AEEL + M  +G+ P   T   V D  
Sbjct: 490 DLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVID-- 547

Query: 426 RAIGLAREAKRVLKSAEEDRQSMPNK 451
              GL ++++  L  A +   SM +K
Sbjct: 548 ---GLCKQSR--LDEATQMFDSMGSK 568



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 183/376 (48%), Gaps = 12/376 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N     G+  EA  +   + E    P ++T++ L+ AL ++ +F     L +++   G+
Sbjct: 290 INGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGI 349

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P++I +N+MI+  S+   +D A ++F  M   GC P   T++ LI GY    + ++ +K
Sbjct: 350 IPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMK 409

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  MS+ + +  N  TY  L+  +C   ++  A +++ +M++SG+ P+ VT NTL    
Sbjct: 410 LLHEMSR-RGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGL 468

Query: 181 AQYGETYRAEQMLFEMQN-----------NQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
              G+   A +M   MQ            N V P+ +T  I++ G   EG   +A     
Sbjct: 469 CNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYE 528

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            M    + P+ + +NS+I G       D   +    M   G  PDVVTF+T+++ +   G
Sbjct: 529 EMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVG 588

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
            +G   E+F +M + GI  +   +  L  G+ + G    A  I   M   GV+P+ +   
Sbjct: 589 RVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIR 648

Query: 350 TVISGWCNAVKMQRAM 365
            +++G  +  +++RA+
Sbjct: 649 NMLTGLWSKEELKRAV 664



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 165/351 (47%), Gaps = 6/351 (1%)

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           E   +D+A+ +F  M  S   P    +  L+     + +P+  + L + M   + +  N 
Sbjct: 53  EIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEM-RRIPCNI 111

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            ++ IL++ +CS + +  A +   K+   G  P  VT++TL            A     +
Sbjct: 112 YSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQ 171

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           +     +PN      +++G C+EG + +A+  L RM E  + PN + + +++ G   + D
Sbjct: 172 I----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGD 227

Query: 256 SDGVDKALTLMEEFG-VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           +      L  MEE   +KP+VV +S I+D     G     Q +F +M + GI P++  ++
Sbjct: 228 TVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYN 287

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            +  G+  +G   +A+ +L  M +  + P+VV F+ +I+      K   A  +Y +M   
Sbjct: 288 CMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPR 347

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           GI PN  TY +++ G+ +  +   AE +  +M  KG  P   T  ++ D +
Sbjct: 348 GIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGY 398



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 12/220 (5%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM-----------KPDSILFN 68
           +I  G  P ++T  TL+  L    + K  L +   ++K  M           +PD   +N
Sbjct: 449 MISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYN 508

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I      G   EA +++++M   G  P T TYN++I G     + +E+ ++   M   
Sbjct: 509 ILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGS- 567

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K   P+  T+  L+  +C    + +   V  +M   GI  +A+TY TL   + Q G    
Sbjct: 568 KGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNING 627

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           A  +  EM ++ V P+  T   +++G   +  ++ A++ L
Sbjct: 628 ALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 16/211 (7%)

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE------IFD 299
           L  GF +IK   G+D A+ L   FG          ++D     G++ + +       +  
Sbjct: 47  LQSGFHEIK---GLDDAIDL---FGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHR 100

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            M    I  +I+ F+IL K +    +   A S    + K G HP++V F+T++ G C   
Sbjct: 101 KMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVED 160

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           ++  A+  + ++C+    PN+  + TL+ G     +   A  LL  M E G++P + T  
Sbjct: 161 RVSEALHFFHQICK----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 216

Query: 420 LVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            + D    +G    A  +L+  EE  +  PN
Sbjct: 217 TIVDGMCKMGDTVSALNLLRKMEEVSRIKPN 247



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 103/239 (43%), Gaps = 6/239 (2%)

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           SG+ +   ++DA+     M      P ++ F  L+   + ++  D V      ME   + 
Sbjct: 49  SGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIP 108

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            ++ +F+ ++  + S   +      F  + K G  P +  FS L  G        +A   
Sbjct: 109 CNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHF 168

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              + K    PNV+ FTT+++G C   ++  A+++ ++M E G+ PN  TY T++ G  +
Sbjct: 169 FHQICK----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCK 224

Query: 393 AKQPWRAEELLQVMEEKG-VRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
                 A  LL+ MEE   ++P       + D     G   +A+ +    +E   S PN
Sbjct: 225 MGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGIS-PN 282


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 217/464 (46%), Gaps = 42/464 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L    +  E    F  ++  G+ P ++TY TL+  L  + R      L  +++K G 
Sbjct: 111 LNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGC 170

Query: 61  KPDSILFNAMINACSESGNV---------------------------------------- 80
            PD + +  +I     +GN+                                        
Sbjct: 171 TPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGR 230

Query: 81  -DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
            DEA ++F++MK  G  P+  +YN+LI G+   GK EES +LL  M  D+ ++P+  T+N
Sbjct: 231 EDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEM-LDQGLQPDMVTFN 289

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           +L+   C +  + EA  ++  M+ SGI PD VTYN+L   +   G+   A ++   M + 
Sbjct: 290 VLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSK 349

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+  +  ++++GY K   +E+AM+    M  +   PN++ ++SL+KG       D  
Sbjct: 350 GCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDA 409

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            K  ++M+  G+  +  T+   +D       + +  ++F ++  +  + +I   + L  G
Sbjct: 410 KKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDG 469

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             +AG+ + A  +   +   G  PNVV +T +I G+C   ++ +A  + +KM   G  P+
Sbjct: 470 LCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPD 529

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           + TY TL+ G+ E+ +     +LL  M +K V P   T  +V D
Sbjct: 530 IITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVD 573



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 201/423 (47%), Gaps = 40/423 (9%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           T   L+  L    R +   +  + + + G  P+ + +N +I        + EA ++F +M
Sbjct: 106 TLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRM 165

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK-----NVKPNDRTYNILVRAW 145
           +  GC P   TY TLIKG    G    +LKL Q M  D      N KPN  TYNI+V   
Sbjct: 166 QKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGL 225

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C     +EA  +  +M   G+ P  ++YN+L   +   G+   ++++L EM +  ++P+ 
Sbjct: 226 CKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDM 285

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T  +++   CKEG + +A + L  M E  + P+LV +NSLI+GF  + D +   +    
Sbjct: 286 VTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVS 345

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M   G +PDV++++ +++ +S    + +  +++++M+  G  P++  +  L KG   AG+
Sbjct: 346 MPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGK 405

Query: 326 PQKAESILTSMRKYGVHPN--------------------VVMFT---------------T 350
              A+ + + M+ +G+  N                    + +FT                
Sbjct: 406 VDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNC 465

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I G C A K++ A  ++EK+   G  PN+ TY  ++ G+    Q  +A  L+Q ME  G
Sbjct: 466 LIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 525

Query: 411 VRP 413
             P
Sbjct: 526 CTP 528



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 177/367 (48%), Gaps = 7/367 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F  +  +G  P++I+Y +L+       +++    L+ ++   G++PD + F
Sbjct: 229 GREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTF 288

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I+   + G V EA K+   M +SG  P   TYN+LI+G+  VG    + +L   M  
Sbjct: 289 NVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPS 348

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K  +P+  +YN+L+  +     +EEA  +  +M+  G +P+ +TY++L +     G+  
Sbjct: 349 -KGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVD 407

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A+++   M+ + +  N  T GI + G CK   + +AM+    +K       +   N LI
Sbjct: 408 DAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLI 467

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            G      +  ++ A  L E+    G +P+VVT++ ++  +   G + K   +   M   
Sbjct: 468 DGLC---KAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEAN 524

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G  PDI  ++ L +G+  + + ++   +L  M +  V P+ +  + V+       K Q  
Sbjct: 525 GCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQEC 584

Query: 365 MSIYEKM 371
           + +  + 
Sbjct: 585 LHLLPRF 591



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 145/286 (50%), Gaps = 1/286 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +GK  EA  +   +IE G  P L+TY +L+          S   L   +   G 
Sbjct: 292 IDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGC 351

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD I +N +IN  S++  V+EAMK++ +M   G +P   TY++L+KG    GK +++ K
Sbjct: 352 EPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKK 411

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L  +M +   +  N  TY I +   C  + + EA  +  ++ +S  + +    N L    
Sbjct: 412 LFSVM-KAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGL 470

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A ++  ++ N    PN  T  I++ G+C+EG ++ A   + +M+     P++
Sbjct: 471 CKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDI 530

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
           + +N+L++GF +    + V + L  M +  V PD +T S ++D  S
Sbjct: 531 ITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLS 576



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 105/232 (45%), Gaps = 8/232 (3%)

Query: 215 YCKEGNME--DAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           +CK GN+    A+ F + M      P+L  FN L+ G   IK    V      M   G+ 
Sbjct: 42  HCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLS 101

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            D  T + +++   +   + +    F  +++ G  P+I  ++ L KG        +A  +
Sbjct: 102 SDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRL 161

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC------EIGINPNLKTYETL 386
              M+K G  P+VV + T+I G C    +  A+ ++++M       EI   PN+ TY  +
Sbjct: 162 FLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNII 221

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           + G  +  +   A++L + M+ +G+ P   +   +   +   G   E+KR+L
Sbjct: 222 VDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLL 273



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 58/128 (45%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK   A  +F  L  EGH P ++TYT ++    R+ +      LI K+E +G  PD
Sbjct: 470 LCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPD 529

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I +N ++    ES  ++E +++  +M      P   T + ++       K +E L LL 
Sbjct: 530 IITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLP 589

Query: 124 LMSQDKNV 131
                K V
Sbjct: 590 RFPIQKGV 597


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 223/443 (50%), Gaps = 3/443 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  I   +I  G +P   T+  L+    R+      L L+ ++EK  + P ++ +
Sbjct: 94  GKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSY 153

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            AMIN      ++  A K+ +KM  SG KP    Y+TLI GY + G+ EE+ +LL  MS 
Sbjct: 154 GAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSC 213

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              V P+   YN ++        +EEA   + ++   G++PDAVT+      Y++ G+  
Sbjct: 214 -SGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 272

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A +   EM ++ + PN     ++++G+ K GN+ +A+     +  L V P++   ++ I
Sbjct: 273 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFI 332

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G L         K  + ++E G+ PDV T+S+++  +   G + K  E+ D+M   GI 
Sbjct: 333 HGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIA 392

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P+I +++ L  G  ++G+ Q+A  +   M + G+ P+ V ++T+I G+C +  +  A S+
Sbjct: 393 PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL 452

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           + +M   G+ P+   Y  L+ G  +     +A  L + M +KG     S   L+    ++
Sbjct: 453 FHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKS 512

Query: 428 IGLAREAKRVLKSAEEDRQSMPN 450
             + +EA ++ +     +Q MP+
Sbjct: 513 CKI-QEASQLFQEMIA-KQIMPD 533



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 221/456 (48%), Gaps = 1/456 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E+G  P   TYT + A L R KR         +++K G+KPD    +A+I+     G++D
Sbjct: 3   EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 62

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           E ++I   M   G      TYN LI G    GK E++ ++L+ M      KPN RT+ +L
Sbjct: 63  EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMIT-LGCKPNSRTFCLL 121

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +  +C ++++  A  ++ +M    + P AV+Y  +        +   A ++L +M  + +
Sbjct: 122 IEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL 181

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           +PN      ++ GY  EG +E+A R L  M    V P++  +N++I         +    
Sbjct: 182 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 241

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            L  ++  G+KPD VTF   +  +S  G M +  + FD+M+  G+ P+  ++++L  G+ 
Sbjct: 242 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 301

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           +AG   +A SI   +   GV P+V   +  I G     ++Q A+ ++ ++ E G+ P++ 
Sbjct: 302 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 361

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY +L+ G+ +  +  +A EL   M  KG+ P       + D     G  + A+++    
Sbjct: 362 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 421

Query: 442 EEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIP 477
            E      +      ++   + +N++ + S F ++P
Sbjct: 422 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 457



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 200/415 (48%), Gaps = 19/415 (4%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +P ++ Y+TL+     + R +    L+  +   G+ PD   +NA+I+  S++G ++EA
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
                +++  G KP   T+   I GY   GK  E+ K    M  D  + PN+  Y +L+ 
Sbjct: 240 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEM-LDHGLMPNNPLYTVLIN 298

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
                 ++ EA ++   + A G+ PD  T +       + G    A ++  E++   + P
Sbjct: 299 GHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVP 358

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   ++SG+CK+G +E A      M    + PN+ ++N+L+ G     D     K  
Sbjct: 359 DVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF 418

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M E G++PD VT+ST++D +  +  + +   +F +M   G++P   V++ L  G  + 
Sbjct: 419 DGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKE 478

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+ +KA ++   M + G     + F T+I G+C + K+Q A  ++++M    I P+  TY
Sbjct: 479 GDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTY 537

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEE-----------------KGVRPKKSTIQLV 421
            T++  + +A +   A  L + M+E                 KGV+P + T  LV
Sbjct: 538 TTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLV 592



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/435 (24%), Positives = 204/435 (46%), Gaps = 25/435 (5%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  EA  + + +   G  P +  Y  +++ L++  + +   + + +++  G+KPD++ 
Sbjct: 198 EGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVT 257

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F A I   S++G + EA K F +M D G  P    Y  LI G+   G   E+L + + + 
Sbjct: 258 FGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHL- 316

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
               V P+ +T +  +        ++EA  V  ++   G+ PD  TY++L   + + GE 
Sbjct: 317 HALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEV 376

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A ++  EM    + PN      +V G CK G+++ A +    M E  + P+ V ++++
Sbjct: 377 EKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTM 436

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           I G+     S+ V +A +L  E    GV+P    ++ ++      G M K   +F +M++
Sbjct: 437 IDGYC---KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ 493

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G    +  F+ L  GY ++ + Q+A  +   M    + P+ V +TTVI   C A KM+ 
Sbjct: 494 KGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEE 552

Query: 364 A-----------------MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
           A                  +++EKM   G+ P+  TY  +++ + +      A +L   +
Sbjct: 553 ANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEV 612

Query: 407 EEKGVRPKKSTIQLV 421
             KG+  K +   L+
Sbjct: 613 VGKGMLTKGTIHDLL 627



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 200/431 (46%), Gaps = 25/431 (5%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA   F+ +++ G  P    YT L+    +       LS+   +   G+ PD    
Sbjct: 269 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTC 328

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +A I+   ++G V EA+K+F ++K+ G  P   TY++LI G+   G+ E++ +L   M  
Sbjct: 329 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 388

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K + PN   YN LV   C    I+ A  +   M   G++PD+VTY+T+   Y +     
Sbjct: 389 -KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVA 447

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +  EM +  V+P+      +V G CKEG+ME AM     M +      L  FN+LI
Sbjct: 448 EAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLI 506

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAG-------LMGKCQE- 296
            G+     S  + +A  L +E   K   PD VT++T++D    AG       L  + QE 
Sbjct: 507 DGYCK---SCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQER 563

Query: 297 ---------IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
                    +F+ MV  G++PD   + ++   + +     +A  +   +   G+     +
Sbjct: 564 NLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTI 623

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
              +I+  C    +  A  + ++M E+G+ P+L    TL+  + EA +   A  + + ++
Sbjct: 624 HDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVK 683

Query: 408 EKGVRPKKSTI 418
             G+ P  +T+
Sbjct: 684 SLGLVPDTTTL 694



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 171/354 (48%), Gaps = 1/354 (0%)

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M + G  P T TY  +  G     +  E+    + M Q   +KP+    + L+  +  + 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEM-QKTGLKPDYNACSALIDGFMREG 59

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            I+E   +   MV+ GI  + +TYN L     ++G+  +A ++L  M     +PN RT  
Sbjct: 60  DIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFC 119

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
           +++ GYC+E NM  A+  L  M++  + P+ V + ++I G    KD    +K L  M   
Sbjct: 120 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 179

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G+KP+VV +ST++  ++S G + + + + D M  +G+ PDI  ++ +     +AG+ ++A
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
            + L  ++  G+ P+ V F   I G+    KM  A   +++M + G+ PN   Y  L+ G
Sbjct: 240 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 299

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           + +A     A  + + +   GV P   T           G  +EA +V    +E
Sbjct: 300 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKE 353



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 186/389 (47%), Gaps = 26/389 (6%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+  G+  EA  +F+ L E+G  P + TY++L++   +Q   +    L  ++   G+ P+
Sbjct: 335 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 394

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             ++NA+++   +SG++  A K+F  M + G +P + TY+T+I GY       E+  L  
Sbjct: 395 IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 454

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K V+P+   YN LV   C +  +E+A N+  +M+  G     +++NTL   Y + 
Sbjct: 455 EMPS-KGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKS 512

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +   A Q+  EM   Q+ P+  T   ++  +CK G ME+A      M+E     NL+  
Sbjct: 513 CKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQE----RNLI-- 566

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
                          VD    L E+    GVKPD VT+  ++ A      + +  ++ D+
Sbjct: 567 ---------------VDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDE 611

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +V  G+     +  +L     +  +  +A  +L  M + G+ P++   +T++  +  A K
Sbjct: 612 VVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGK 671

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           M  A  ++E +  +G+ P+  T   L+ G
Sbjct: 672 MDEATRVFEGVKSLGLVPDTTTLIDLVNG 700



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 139/305 (45%), Gaps = 52/305 (17%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G    A  +F+ + E+G  P  +TY+T++    + +      SL  ++   G++P 
Sbjct: 405 LCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPH 464

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           S ++NA+++ C + G++++AM +F++M   G   TT ++NTLI GY    K +E+ +L Q
Sbjct: 465 SFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQ 523

Query: 124 LM----------------------------------SQDKN-----------------VK 132
            M                                   Q++N                 VK
Sbjct: 524 EMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVK 583

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P++ TY +++ A C ++++ EA+ +  ++V  G+      ++ L  A  +  +   A ++
Sbjct: 584 PDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKL 643

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           L EM    ++P+   C  +V  + + G M++A R    +K L + P+      L+ G L+
Sbjct: 644 LDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLN 703

Query: 253 IKDSD 257
             DS+
Sbjct: 704 DTDSE 708



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 23/92 (25%), Positives = 49/92 (53%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           +  L+ AL +++       L+ ++ + G+KP     + ++ +  E+G +DEA ++F+ +K
Sbjct: 624 HDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVK 683

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             G  P T+T   L+ G  N    E++  L++
Sbjct: 684 SLGLVPDTTTLIDLVNGNLNDTDSEDARNLIK 715


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 242/499 (48%), Gaps = 59/499 (11%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK-DG 59
           MN L  +G+  EA  + + ++E+G +PT ITY T+V  + +     S L L+ K+E+   
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISH 250

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + P+ ++++A+I++  + G   +A  +F +M++ G  P   TYN++I G+ + G+  ++ 
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +LLQ M + K + P+  TYN L+ A+  +    EA  +  +M+  GI P+ +TY+++   
Sbjct: 311 QLLQEMLERK-ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG 369

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + +      AE M + M      PN  T   ++ GYC    ++D M  L+ M E  +  +
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
              +N+LI GF  + D   ++ AL L++E    G+ PD+VT  T++D     G +    E
Sbjct: 430 TTTYNTLIHGFYLVGD---LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 297 IFDDMVKA-----------GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV---- 341
           +F  M K+           G+EPD+  ++IL  G +  G+  +AE +   M   G+    
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 342 -------------------------------HPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
                                           PNVV FTT+I+G+C A ++   + ++ +
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ-LVADSWRAIG 429
           M   GI  N  TY TL+ G+ +      A ++ Q M   GV P   TI+ ++   W    
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWS--- 663

Query: 430 LAREAKRVLKSAEEDRQSM 448
              E KR +   E+ + SM
Sbjct: 664 -KEELKRAVAMLEKLQMSM 681



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 211/438 (48%), Gaps = 2/438 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F+ ++     P+++ +  L+  + R +R   ++SL  K+E+  ++ D   F  +I
Sbjct: 62  DAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILI 121

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                   +  A+  F K+   G  P   T+NTL+ G     +  E+L L   M +    
Sbjct: 122 KCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE-TTC 180

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +PN  T+  L+   C +  I EA  ++ +M+  G+QP  +TY T+     + G+T  A  
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALD 240

Query: 192 MLFEMQN-NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           +L +M+  + + PN      I+   CK+G   DA      M+E  + P+L  +NS+I GF
Sbjct: 241 LLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
                    ++ L  M E  + PDVVT++ +++A+   G   + +E++D+M+  GI P+ 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             +S +  G+ +      AE +   M   G  PN++ F T+I G+C A ++   M +  +
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M E G+  +  TY TL+ G+        A +LLQ M   G+ P   T   + D     G 
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 431 AREAKRVLKSAEEDRQSM 448
            ++A  + K  ++ ++ +
Sbjct: 481 LKDALEMFKVMQKSKKDL 498



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 212/439 (48%), Gaps = 18/439 (4%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P ++T+ TL+  L  + R    L+L  ++ +   +P+ + F  ++N     G + EA
Sbjct: 144 GLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA 203

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +  +M + G +PT  TY T++ G   +G    +L LL+ M +  ++ PN   Y+ ++ 
Sbjct: 204 VALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIID 263

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C      +A N+  +M   GI PD  TYN++   +   G    AEQ+L EM   ++ P
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   +++ + KEG   +A      M    + PN + ++S+I GF      D  +   
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF 383

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            LM   G  P+++TF+T++D +  A  +    E+  +M + G+  D   ++ L  G+   
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI--------- 374
           G+   A  +L  M   G+ P++V   T++ G C+  K++ A+ +++ M +          
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503

Query: 375 --GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
             G+ P+++TY  L+ G     +   AEEL + M  +G+ P   T   + D     GL +
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID-----GLCK 558

Query: 433 EAKRVLKSAEEDRQSMPNK 451
           +++  L  A +   SM +K
Sbjct: 559 QSR--LDEATQMFDSMGSK 575



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 170/351 (48%), Gaps = 2/351 (0%)

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           E   +++A+ +F  M  S   P+   +  L+     + +P+  + L Q M + K ++ + 
Sbjct: 56  EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMER-KQIRCDI 114

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            ++ IL++ +CS + +  A +   K+   G+ PD VT+NTL            A  +  +
Sbjct: 115 YSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQ 174

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M     RPN  T   +++G C+EG + +A+  L RM E  + P  + + +++ G   I D
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGD 234

Query: 256 SDGVDKALTLMEEFG-VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           +      L  MEE   + P+VV +S I+D+    G     Q +F +M + GI PD+  ++
Sbjct: 235 TVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            +  G+  +G    AE +L  M +  + P+VV +  +I+ +    K   A  +Y++M   
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           GI PN  TY +++ G+ +  +   AE +  +M  KG  P   T   + D +
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGY 405



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 6/208 (2%)

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           L  GF +IK   G++ A+ L  +       P VV F  +M              ++  M 
Sbjct: 50  LQSGFHEIK---GLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKME 106

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           +  I  DI+ F+IL K +    +   A S    + K G+HP+VV F T++ G C   ++ 
Sbjct: 107 RKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVS 166

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A++++ +M E    PN+ T+ TL+ G     +   A  LL  M E G++P + T   + 
Sbjct: 167 EALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226

Query: 423 DSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           D    IG    A  +L+  EE    +PN
Sbjct: 227 DGMCKIGDTVSALDLLRKMEEISHIIPN 254



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 106/232 (45%), Gaps = 1/232 (0%)

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           SG+ +   +EDA+     M      P++V F  L+   + ++  D V      ME   ++
Sbjct: 52  SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            D+ +F+ ++  + S   +      F  + K G+ PD+  F+ L  G        +A ++
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNL 171

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              M +    PNVV FTT+++G C   ++  A+++ ++M E G+ P   TY T++ G  +
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 393 AKQPWRAEELLQVMEE-KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
                 A +LL+ MEE   + P       + DS    G   +A+ +    +E
Sbjct: 232 IGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 209/418 (50%), Gaps = 1/418 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P++ITYT LV AL +  R      ++  + + G  P+ + +N +IN   + GN+DEA+ +
Sbjct: 234 PSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVL 293

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F +M ++ C P   TYN LI GY    +P++  KLLQ M +    +PN  TYN L+ +  
Sbjct: 294 FNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVK-YGCEPNFITYNTLMDSLV 352

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                 +A+N+   M+    +P   T+N +   + + G+   A ++   M +    P+  
Sbjct: 353 KSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIY 412

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T  I++SG C+   ++DA + L RM E    P++V +NS++ G       D   +   ++
Sbjct: 413 TYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVL 472

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              G   DVVT ST++D    +  +   +++  +M + G  PD+  ++IL  G+ +A + 
Sbjct: 473 RNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQL 532

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            K+ +  + M   G  P V+ ++ VI   C + +++    + + M E G+ P+   Y ++
Sbjct: 533 DKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSV 592

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           + G  ++     A EL ++M++ G  P   T  ++ D    +    EA  +L+  E D
Sbjct: 593 IDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESD 650



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 205/409 (50%), Gaps = 7/409 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA  +FN ++E    P + TY  L+    +Q+R +    L+ ++ K G +P+ I +
Sbjct: 285 GNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITY 344

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++++  +SG   +A  + Q M    CKP+  T+N +I  +  VG+ + + +L QLM+ 
Sbjct: 345 NTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMT- 403

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D+   P+  TYNI++   C  N I++A  ++ +M  +G  PD VTYN++     +  +  
Sbjct: 404 DRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVD 463

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++   ++N     +  TC  ++ G CK   ++DA + L  M+     P++V +  LI
Sbjct: 464 EAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILI 523

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            GF     +D +DK+L    E    G  P V+T+S ++D    +  +     +   M++ 
Sbjct: 524 HGFC---KADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLER 580

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+ PD  V++ +  G  ++    +A  +   M++ G  P VV +  ++   C   ++  A
Sbjct: 581 GVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEA 640

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           + + E M   G  P+  TY ++  G+ ++ +  +A  L Q M+ +G  P
Sbjct: 641 IHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSP 689



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 194/397 (48%), Gaps = 6/397 (1%)

Query: 19  CLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESG 78
           C  + G++ +  T   L++A  R+K+ +    L          PDSI ++ +IN   ++ 
Sbjct: 122 CTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKAR 181

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
           +  +A ++  +M+  G  P  + YNT+IKG  + G+ + +  L+      +N  P+  TY
Sbjct: 182 DFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSA--LVHYRDMQRNCAPSVITY 239

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
            ILV A C    I +A  ++  M+ +G  P+ VTYNTL   + + G    A  +  +M  
Sbjct: 240 TILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLE 299

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
           N   P+  T  I++ GYCK+   +D  + L  M +    PN + +N+L+     +K    
Sbjct: 300 NSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSL--VKSGKY 357

Query: 259 VD--KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           +D      +M     KP   TF+ ++D +   G +    E+F  M   G  PDI+ ++I+
Sbjct: 358 IDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIM 417

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G  RA     A  +L  M + G  P+VV + +++SG C A ++  A  +YE +   G 
Sbjct: 418 ISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGY 477

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             ++ T  TL+ G  ++++   AE+LL+ ME  G  P
Sbjct: 478 FLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAP 514



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 155/330 (46%), Gaps = 5/330 (1%)

Query: 116 EESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
           ++++K     +     K +  T N L+ A+  K   +EA+++          PD++TY+T
Sbjct: 113 DKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYST 172

Query: 176 LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
           L   + +  +  +A ++L EM+   + P+      I+ G C  G ++ A+   YR  +  
Sbjct: 173 LINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH-YRDMQRN 231

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTL--MEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
             P+++ +  L+      K +   D +L L  M E G  P+VVT++T+++ +   G M +
Sbjct: 232 CAPSVITYTILVDAL--CKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDE 289

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
              +F+ M++    PD+  ++IL  GY +   PQ    +L  M KYG  PN + + T++ 
Sbjct: 290 AVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMD 349

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
               + K   A ++ + M      P+  T+  ++  + +  Q   A EL Q+M ++G  P
Sbjct: 350 SLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLP 409

Query: 414 KKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
              T  ++           +A+++L+   E
Sbjct: 410 DIYTYNIMISGACRANRIDDARQLLERMTE 439


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 215/447 (48%), Gaps = 32/447 (7%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  +A   F   I+ G RPT++TY+T++  L R         L+ ++   G 
Sbjct: 8   INGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGC 67

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+++ +N ++NA    G   EA  + ++M  +GC P   T+  +IKG    G+ E + +
Sbjct: 68  APNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFR 127

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           ++  M  D+   P+   + +L+ A C    ++EAW    +++  G  PDAVTYNT+    
Sbjct: 128 VVDEMV-DRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGL 186

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A  +L  +  +   P   T  I V G  K GN+  A  F   M +  V PN 
Sbjct: 187 YKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNT 246

Query: 241 VVFNSLIKGF-----LDI-------KDSDG-----------------VDKALTLMEEFGV 271
           V +++LI G      LDI       K+S                   +++A+ L++    
Sbjct: 247 VTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPC 306

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE-PQKAE 330
            P+VV F+++M+    A  + +  E+FD M ++G   D+  ++IL KG  +    P+   
Sbjct: 307 VPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYR 366

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI-GINPNLKTYETLLWG 389
            +    R  G  PNVV F+T+I G CNA ++ +A  +YE+M  + GI+PN  TY  LL G
Sbjct: 367 HVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEG 426

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKS 416
             +A    R E+  + M E+  R   S
Sbjct: 427 LCKAGDSRRLEQCFEQMLEREWRSSSS 453



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 216/457 (47%), Gaps = 33/457 (7%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L ++  +  +  +++L+  L +  R +  + L+  +      P+ + FN+++N   ++  
Sbjct: 269 LRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMP---CVPNVVCFNSLMNGLCQARR 325

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           VDEA ++F  MK+SGC     TYN L+KG   + +  E+ + ++LM + +   PN  T++
Sbjct: 326 VDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFS 385

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVA-SGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
            L++  C+   + +AW V  +MVA  GI P+  TY  L     + G++ R EQ   +M  
Sbjct: 386 TLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLE 445

Query: 199 NQ---------------------VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
            +                      RP   T   +V+G  K G + DA+  L  M E  + 
Sbjct: 446 REWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLS 505

Query: 238 PNLVVFNSLIKGFLD---IKDSDGVDK-ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
           P+++ FNS++ G      I D+  V K AL    E G +P+VVT+ST++D  S    M +
Sbjct: 506 PDVITFNSVLDGLCKEQRILDAHNVFKRAL----ERGCRPNVVTYSTLIDGLSKMAKMDE 561

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
             ++   MV+ G   +   +S +  G ++ G  + A  +L  MR  G  P+ V + T+I 
Sbjct: 562 ALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLID 621

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G+    +++ A+ +  +M E G +P++ TY TL  G   + +   A E+L  M  +G  P
Sbjct: 622 GFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAP 681

Query: 414 KKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
              T   + D     G   EA    +    D    P+
Sbjct: 682 NAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPH 718



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 223/467 (47%), Gaps = 4/467 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  +   +IE G  P +IT+ +++  L +++R     ++  +  + G +P+ + +
Sbjct: 487 GMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTY 546

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +I+  S+   +DEA+++  KM + GC+  T TY+T++ G   VG+ E+++ +L+ M +
Sbjct: 547 STLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQM-R 605

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D    P+  TYN L+  +  +  + EA  ++ +M+ +G  P  VTY TL     + G   
Sbjct: 606 DAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFD 665

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV-HPNLVVFNSL 246
            A ++L  M      PN  T   IV G CK G + +A+ +  +M   EV  P+++ +++L
Sbjct: 666 EAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSAL 725

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G       D   + L  M   G  PDVVTFS +++    AG +    E+F  M + G 
Sbjct: 726 IDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGC 785

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           + DI+ ++ +   Y   GE   A ++L  M+ +G+  N V    VI   C   ++  A+S
Sbjct: 786 KADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVS 845

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
            +  + E   +    +Y TL+     +++  +A ELL+ M   G  P       V D   
Sbjct: 846 YFHSIPEDCRDE--ISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLF 903

Query: 427 AIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF 473
             G    A ++L+       S   +   I +  + + + L  +   F
Sbjct: 904 KAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYF 950



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/464 (23%), Positives = 215/464 (46%), Gaps = 35/464 (7%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +AH +F   +E G RP ++TY+TL+  L++  +    L L++K+ + G + +++ ++ ++
Sbjct: 526 DAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVV 585

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   + G +++A+ + ++M+D+GC P   TYNTLI G+    +  E++ LL+ M +    
Sbjct: 586 DGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLE-AGF 644

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  TY  L    C     +EA  ++  M A G  P+A+TY+++     + G    A  
Sbjct: 645 HPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALG 704

Query: 192 MLFEMQNNQV-RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
              +M  ++V  P+      ++ G CK G +++A  FL RM      P++V F+ LI G 
Sbjct: 705 YFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGL 764

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
            D    D   +    M E G K D+  ++ +++A+   G       + ++M   GI  + 
Sbjct: 765 CDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNT 824

Query: 311 HVFSILAKGY---------------------------------VRAGEPQKAESILTSMR 337
               I+ K                                   V +   ++A  +L +M 
Sbjct: 825 VTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMV 884

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
             G  P+   + TV+ G   A   + A  + ++M   G +P+L+TY  ++ G  +AKQ  
Sbjct: 885 ADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLP 944

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
            A +  + M  K ++P       + D++       +A ++L+S+
Sbjct: 945 LACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRSS 988



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/433 (24%), Positives = 205/433 (47%), Gaps = 7/433 (1%)

Query: 7    KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
            + +  EA  +   ++E G  P+++TYTTL   L R  RF   + ++  +   G  P++I 
Sbjct: 626  RQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAIT 685

Query: 67   FNAMINACSESGNVDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            ++++++   ++G V EA+  F+KM +D    P    Y+ LI G    G+ +E+ + L+ M
Sbjct: 686  YSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERM 745

Query: 126  SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
             +   + P+  T++IL+   C    I+    +   M   G + D   YN +  AY   GE
Sbjct: 746  IRAGRI-PDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGE 804

Query: 186  TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
               A  +L EM+ + +  N  T GI++   C    +++A+ + + + E     + + +N+
Sbjct: 805  FSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPE--DCRDEISYNT 862

Query: 246  LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
            LI   +  + S+   + L  M   G  PD   + T+MD    AG      ++  +M   G
Sbjct: 863  LITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRG 922

Query: 306  IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
              PD+  ++I+  G  +A +   A      M +  + P+ ++++++I  +C A K+  A 
Sbjct: 923  HSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAW 982

Query: 366  SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
             +       GI P +  Y T++    + +   +A E+++ M+ K   P       +A ++
Sbjct: 983  KLLRSS---GIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAY 1039

Query: 426  RAIGLAREAKRVL 438
             A G   EA +++
Sbjct: 1040 VAEGRVDEAVKLV 1052



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/447 (24%), Positives = 201/447 (44%), Gaps = 29/447 (6%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK-DG 59
           MN L    +  EA  +F+ + E G    +ITY  L+  L + +R       +  + + +G
Sbjct: 317 MNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEG 376

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGK---- 114
             P+ + F+ +I     +G V++A +++++M    G  P   TY  L++G    G     
Sbjct: 377 CSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRL 436

Query: 115 ------------------PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWN 156
                             P  S ++  LM Q    +P   TYN LV        + +A  
Sbjct: 437 EQCFEQMLEREWRSSSSWPIHSPEVDFLMVQ--VCRPTLVTYNTLVTGLSKSGMVRDALG 494

Query: 157 VVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
           ++  M+ SG+ PD +T+N++     +      A  +         RPN  T   ++ G  
Sbjct: 495 LLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLS 554

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           K   M++A++ L +M EL    N V +++++ G L +   +     L  M + G  PD V
Sbjct: 555 KMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAV 614

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T++T++D +     + +   +  +M++AG  P +  ++ L  G  R+G   +A  IL  M
Sbjct: 615 TYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYM 674

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC--EIGINPNLKTYETLLWGYGEAK 394
              G  PN + +++++ G C A ++  A+  +EKM   E+ + P++  Y  L+ G  +A 
Sbjct: 675 AARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV-VAPHVIAYSALIDGLCKAG 733

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLV 421
           +   A E L+ M   G  P   T  ++
Sbjct: 734 RIDEAYEFLERMIRAGRIPDVVTFSIL 760



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/499 (24%), Positives = 214/499 (42%), Gaps = 71/499 (14%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISK-VEKDGMKPDSILFNAMINACSESGNVD 81
           EG  P ++T++TL+  L    R      +  + V  +G+ P+   +  ++    ++G+  
Sbjct: 375 EGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSR 434

Query: 82  EAMKIFQKMKDSG---------------------CKPTTSTYNTLIKGYGNVGKPEESLK 120
              + F++M +                       C+PT  TYNTL+ G    G   ++L 
Sbjct: 435 RLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALG 494

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M +   + P+  T+N ++   C +  I +A NV  + +  G +P+ VTY+TL    
Sbjct: 495 LLEFMIE-SGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGL 553

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++  +   A Q+L +M     R N  T   +V G  K G MEDA+  L +M++    P+ 
Sbjct: 554 SKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDA 613

Query: 241 VVFNSLIKGFLD---IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +N+LI GF     ++++ G+   L  M E G  P VVT++T+      +G   +  EI
Sbjct: 614 VTYNTLIDGFFKRQRLREAVGL---LREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEI 670

Query: 298 FDDMV-------------------KAG-----------------IEPDIHVFSILAKGYV 321
            D M                    KAG                 + P +  +S L  G  
Sbjct: 671 LDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLC 730

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           +AG   +A   L  M + G  P+VV F+ +I+G C+A ++   + ++  M E G   ++ 
Sbjct: 731 KAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIY 790

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
            Y  ++  Y    +   A  LL+ M+  G+     T  +V  +        EA     S 
Sbjct: 791 AYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSI 850

Query: 442 EEDRQSMPNKKDEIAVESI 460
            ED       +DEI+  ++
Sbjct: 851 PED------CRDEISYNTL 863



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 184/386 (47%), Gaps = 7/386 (1%)

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           + +N +IN   ++G V +A   F+K    G +PT  TY+T+I G     + ++  KLL+ 
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M+  +   PN  TYN LV A   +   +EA++++ +M A+G  P+ +T+  + +   + G
Sbjct: 62  MA-GRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           E   A +++ EM +    P+     +++   C+ G +++A  F  ++  +   P+ V +N
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +++ G       +     L L+ E    P V TF+  +D  S AG +    E FD M + 
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+ P+   +  L  G  +AG   K +  L  +R       +  F++++ G C A +++ A
Sbjct: 241 GVSPNTVTYDALIDGLCKAG---KLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEA 297

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           + + + M  +   PN+  + +L+ G  +A++   A EL  VM+E G      T  ++   
Sbjct: 298 IQLLKAMPCV---PNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKG 354

Query: 425 WRAIGLAREAKRVLKSAEEDRQSMPN 450
              +    EA R ++         PN
Sbjct: 355 LCKLRRIPEAYRHVELMRRTEGCSPN 380



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 157/334 (47%), Gaps = 6/334 (1%)

Query: 4    LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            L   G+  EA+     +I  G  P ++T++ L+  L    R  + L L   + + G K D
Sbjct: 729  LCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKAD 788

Query: 64   SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
               +NAMINA    G    A  + ++MK  G    T T+  +IK      + +E++    
Sbjct: 789  IYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFH 848

Query: 124  LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
             + +D     ++ +YN L+ +  +    E+A  ++  MVA G  PDA  Y T+     + 
Sbjct: 849  SIPEDCR---DEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKA 905

Query: 184  GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            G    A ++L EM++    P+ RT  I++SG  K   +  A  +   M    + P+ +V+
Sbjct: 906  GSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVY 965

Query: 244  NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            +SLI  F     +D VD A  L+   G++P +  +ST++D+        K  E+  +M  
Sbjct: 966  SSLIDAFCK---ADKVDDAWKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKS 1022

Query: 304  AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
               EP IH+++ LA  YV  G   +A  ++  ++
Sbjct: 1023 KNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 119/274 (43%), Gaps = 41/274 (14%)

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T  ++++G CK G + DA     +  +    P +V ++++I G    +D++ VDK   L+
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGL--CRDNE-VDKGCKLL 59

Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           EE    G  P+ VT++T+++A    G   +   + + M   G  P++  F ++ KG  + 
Sbjct: 60  EEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKE 119

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           GE + A  ++  M   G  P+V + T ++   C   ++  A   ++++  IG  P+  TY
Sbjct: 120 GEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTY 179

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            T++ G  +A +   A  +LQ++ E    P   T                          
Sbjct: 180 NTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFT------------------------ 215

Query: 444 DRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIP 477
                      IAV+ + +  NL+ +   F  +P
Sbjct: 216 -----------IAVDGLSKAGNLTGAYEFFDSMP 238



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 87/158 (55%), Gaps = 4/158 (2%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            M+ L   G P  A  +   +   GH P L TYT +++ L++ K+         ++ +  +
Sbjct: 899  MDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNL 958

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            KPD+I+++++I+A  ++  VD+A K+   ++ SG +PT + Y+T++         +++L+
Sbjct: 959  KPDAIVYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITMYSTMVDSLCKNRGTDKALE 1015

Query: 121  LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVV 158
            +++ M + KN +P    +  L  A+ ++  ++EA  +V
Sbjct: 1016 VIREM-KSKNCEPGIHIWTSLATAYVAEGRVDEAVKLV 1052


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 215/405 (53%), Gaps = 1/405 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG+ H+A    + L+  G     ++Y TL+  L +    ++ L L+ +V+   ++ D ++
Sbjct: 153 KGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVM 212

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +I++  +  NV++A  ++ +M          TY+ LI G+  VGK ++++ L   M+
Sbjct: 213 YSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMT 272

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            + N+ P+  T+NILV A+C +  ++EA N +  M+  GI+PD VTYN+L   Y    E 
Sbjct: 273 SE-NINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEV 331

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+ +L  M +  V    R+  I+++G+CK   ++ AM+    M   ++ PN++ +NSL
Sbjct: 332 NMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSL 391

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G           + + LM + G +PD++T+S+I+DA     L+ K   +   +   GI
Sbjct: 392 IDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGI 451

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+++ ++IL  G  + G  + A +I   +   G +  V  +T +I G+C+      A+S
Sbjct: 452 RPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALS 511

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           +  KM +    P+  TYE ++    +  +  +AE+LL+ M  +G+
Sbjct: 512 LLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGL 556



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 204/430 (47%), Gaps = 42/430 (9%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +FNCL+ +   P  + +  ++ +L + K + ++LSL  K+E  G+KP+ + FN +I
Sbjct: 53  DAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILI 112

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N   + G +  A  +  K+   G +P T T NT IKG+                      
Sbjct: 113 NCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGF---------------------- 150

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
                         C K  I +A N   K+VA G   D V+Y TL     + GET  A +
Sbjct: 151 --------------CLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALE 196

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L  +    V+ +      I+   CK+ N+ DA      M    +  N+V +++LI GF 
Sbjct: 197 LLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFC 256

Query: 252 ---DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
               +KD+ G+   +T      + PDV TF+ ++DA+   G + + +     M+K GI+P
Sbjct: 257 IVGKLKDAIGLFNKMT---SENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKP 313

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           DI  ++ L  GY    E   A+SIL +M   GV   V  +  VI+G+C    + +AM ++
Sbjct: 314 DIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLF 373

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           ++M    I PN+ TY +L+ G  ++ +   A EL+ +M ++G +P   T   + D+    
Sbjct: 374 KEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKN 433

Query: 429 GLAREAKRVL 438
            L  +A  +L
Sbjct: 434 HLVDKAIALL 443



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/426 (23%), Positives = 185/426 (43%), Gaps = 54/426 (12%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  +FN +  E   P + T+  LV A  ++ R K   + ++ + K G+KPD + +
Sbjct: 259 GKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTY 318

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N++++       V+ A  I   M   G   T  +YN +I G+  +   ++++KL + M  
Sbjct: 319 NSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHH 378

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K + PN  TYN L+   C    I  A  ++  M   G QPD +TY+++  A  +     
Sbjct: 379 -KQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVD 437

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A  +L ++++  +RPN  T  I++ G CK G +EDA      +     +  +  +  +I
Sbjct: 438 KAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMI 497

Query: 248 KGFLDIKDSDGV-DKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           +GF     S G+ D+AL+L   M++    PD +T+  I+ +        K +++  +M+ 
Sbjct: 498 QGFC----SHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMIT 553

Query: 304 AGIEPD------------------------------------------IHVFSILAKGYV 321
            G+                                             I+   +L K  +
Sbjct: 554 RGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNM 613

Query: 322 RAGEPQKAESILTSM---RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           R  + +    I+ S     K G   +V  +T +I G+C+      ++++  KM   G  P
Sbjct: 614 RDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIP 673

Query: 379 NLKTYE 384
           +  TY+
Sbjct: 674 DAVTYD 679



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/322 (22%), Positives = 147/322 (45%), Gaps = 1/322 (0%)

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           +N  P D  +  ++ +           ++  KM   GI+P+ V +N L   + Q G    
Sbjct: 64  QNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPF 123

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  +L ++      P+  T    + G+C +G +  A+ F  ++  L  H + V + +LI 
Sbjct: 124 AFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLIN 183

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G   + ++    + L  ++   V+ DVV +STI+D+      +    +++ +MV   I  
Sbjct: 184 GLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISS 243

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           +I  +S L  G+   G+ + A  +   M    ++P+V  F  ++  +C   +++ A +  
Sbjct: 244 NIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGL 303

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
             M + GI P++ TY +L+ GY    +   A+ +L  M  +GV     +  +V + +  I
Sbjct: 304 AMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKI 363

Query: 429 GLAREAKRVLKSAEEDRQSMPN 450
            +  +A ++ K     +Q  PN
Sbjct: 364 KMVDQAMKLFKEMHH-KQIFPN 384



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 96/177 (54%), Gaps = 1/177 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+   A  + + + + G +P +ITY++++ AL +       ++L+ K++  G++P+
Sbjct: 395 LCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPN 454

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +  +I+   + G +++A  IF+ +   G   T +TY  +I+G+ + G  +E+L LL 
Sbjct: 455 MYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLS 514

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            M +D +  P+  TY I++ +   K+  ++A  ++ +M+  G+    + Y + + ++
Sbjct: 515 KM-KDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSF 570


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 223/443 (50%), Gaps = 3/443 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  I   +I  G +P   T+  L+    R+      L L+ ++EK  + P ++ +
Sbjct: 293 GKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSY 352

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            AMIN      ++  A K+ +KM  SG KP    Y+TLI GY + G+ EE+ +LL  MS 
Sbjct: 353 GAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSC 412

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              V P+   YN ++        +EEA   + ++   G++PDAVT+      Y++ G+  
Sbjct: 413 -SGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 471

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A +   EM ++ + PN     ++++G+ K GN+ +A+     +  L V P++   ++ I
Sbjct: 472 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFI 531

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G L         K  + ++E G+ PDV T+S+++  +   G + K  E+ D+M   GI 
Sbjct: 532 HGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIA 591

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P+I +++ L  G  ++G+ Q+A  +   M + G+ P+ V ++T+I G+C +  +  A S+
Sbjct: 592 PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL 651

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           + +M   G+ P+   Y  L+ G  +     +A  L + M +KG     S   L+    ++
Sbjct: 652 FHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKS 711

Query: 428 IGLAREAKRVLKSAEEDRQSMPN 450
             + +EA ++ +     +Q MP+
Sbjct: 712 CKI-QEASQLFQEMIA-KQIMPD 732



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 221/456 (48%), Gaps = 1/456 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E+G  P   TYT + A L R KR         +++K G+KPD    +A+I+     G++D
Sbjct: 202 EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 261

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           E ++I   M   G      TYN LI G    GK E++ ++L+ M      KPN RT+ +L
Sbjct: 262 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMIT-LGCKPNSRTFCLL 320

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +  +C ++++  A  ++ +M    + P AV+Y  +        +   A ++L +M  + +
Sbjct: 321 IEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL 380

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           +PN      ++ GY  EG +E+A R L  M    V P++  +N++I         +    
Sbjct: 381 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 440

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            L  ++  G+KPD VTF   +  +S  G M +  + FD+M+  G+ P+  ++++L  G+ 
Sbjct: 441 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 500

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           +AG   +A SI   +   GV P+V   +  I G     ++Q A+ ++ ++ E G+ P++ 
Sbjct: 501 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 560

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY +L+ G+ +  +  +A EL   M  KG+ P       + D     G  + A+++    
Sbjct: 561 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 620

Query: 442 EEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIP 477
            E      +      ++   + +N++ + S F ++P
Sbjct: 621 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 656



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 206/418 (49%), Gaps = 8/418 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  EA  + + +   G  P +  Y  +++ L++  + +   + + +++  G+KPD++ 
Sbjct: 397 EGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVT 456

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F A I   S++G + EA K F +M D G  P    Y  LI G+   G   E+L + + + 
Sbjct: 457 FGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHL- 515

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
               V P+ +T +  +        ++EA  V  ++   G+ PD  TY++L   + + GE 
Sbjct: 516 HALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEV 575

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A ++  EM    + PN      +V G CK G+++ A +    M E  + P+ V ++++
Sbjct: 576 EKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTM 635

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           I G+     S+ V +A +L  E    GV+P    ++ ++      G M K   +F +M++
Sbjct: 636 IDGYC---KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ 692

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G    +  F+ L  GY ++ + Q+A  +   M    + P+ V +TTVI   C A KM+ 
Sbjct: 693 KGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEE 751

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           A  ++++M E  +  +  TY +L++GY +  Q      L + M  KGV+P + T  LV
Sbjct: 752 ANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLV 809



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 200/410 (48%), Gaps = 2/410 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +P ++ Y+TL+     + R +    L+  +   G+ PD   +NA+I+  S++G ++EA
Sbjct: 379 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 438

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
                +++  G KP   T+   I GY   GK  E+ K    M  D  + PN+  Y +L+ 
Sbjct: 439 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEM-LDHGLMPNNPLYTVLIN 497

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
                 ++ EA ++   + A G+ PD  T +       + G    A ++  E++   + P
Sbjct: 498 GHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVP 557

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   ++SG+CK+G +E A      M    + PN+ ++N+L+ G     D     K  
Sbjct: 558 DVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF 617

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M E G++PD VT+ST++D +  +  + +   +F +M   G++P   V++ L  G  + 
Sbjct: 618 DGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKE 677

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+ +KA ++   M + G     + F T+I G+C + K+Q A  ++++M    I P+  TY
Sbjct: 678 GDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTY 736

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
            T++  + +A +   A  L + M+E+ +     T   +   +  +G + E
Sbjct: 737 TTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSE 786



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 204/438 (46%), Gaps = 8/438 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA   F+ +++ G  P    YT L+    +       LS+   +   G+ PD    
Sbjct: 468 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTC 527

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +A I+   ++G V EA+K+F ++K+ G  P   TY++LI G+   G+ E++ +L   M  
Sbjct: 528 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 587

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K + PN   YN LV   C    I+ A  +   M   G++PD+VTY+T+   Y +     
Sbjct: 588 -KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVA 646

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +  EM +  V+P+      +V G CKEG+ME AM     M +      L  FN+LI
Sbjct: 647 EAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLI 705

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            G+     S  + +A  L +E   K   PD VT++T++D    AG M +   +F +M + 
Sbjct: 706 DGYCK---SCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQER 762

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
            +  D   ++ L  GY + G+  +  ++   M   GV P+ V +  VI   C    +  A
Sbjct: 763 NLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEA 822

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             + +++   G+      ++ L+    + +    A +LL  M E G++P  +    +  S
Sbjct: 823 FKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRS 882

Query: 425 WRAIGLAREAKRVLKSAE 442
           +   G   EA RV +  +
Sbjct: 883 FHEAGKMDEATRVFEGVK 900



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 191/386 (49%), Gaps = 2/386 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+  G+  EA  +F+ L E+G  P + TY++L++   +Q   +    L  ++   G+ P+
Sbjct: 534 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 593

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             ++NA+++   +SG++  A K+F  M + G +P + TY+T+I GY       E+  L  
Sbjct: 594 IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 653

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K V+P+   YN LV   C +  +E+A N+  +M+  G     +++NTL   Y + 
Sbjct: 654 EMPS-KGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKS 711

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +   A Q+  EM   Q+ P+  T   ++  +CK G ME+A      M+E  +  + V +
Sbjct: 712 CKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTY 771

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            SL+ G+  +  S  V      M   GVKPD VT+  ++ A      + +  ++ D++V 
Sbjct: 772 TSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVG 831

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+     +  +L     +  +  +A  +L  M + G+ P++   +T++  +  A KM  
Sbjct: 832 KGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDE 891

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWG 389
           A  ++E +  +G+ P+  T   L+ G
Sbjct: 892 ATRVFEGVKSLGLVPDTTTLIDLVNG 917



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 187/397 (47%), Gaps = 19/397 (4%)

Query: 65  ILFNAMINACSESGNVDEAMKIF------------------QKMKDSGCKPTTSTYNTLI 106
           ++F+ +I++    G +DEA  +F                  + M + G  P T TY  + 
Sbjct: 157 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIIT 216

Query: 107 KGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGI 166
            G     +  E+    + M Q   +KP+    + L+  +  +  I+E   +   MV+ GI
Sbjct: 217 AGLCRAKRMNEAKLTFEEM-QKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGI 275

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR 226
             + +TYN L     ++G+  +A ++L  M     +PN RT  +++ GYC+E NM  A+ 
Sbjct: 276 PINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALE 335

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
            L  M++  + P+ V + ++I G    KD    +K L  M   G+KP+VV +ST++  ++
Sbjct: 336 LLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYA 395

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
           S G + + + + D M  +G+ PDI  ++ +     +AG+ ++A + L  ++  G+ P+ V
Sbjct: 396 SEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAV 455

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            F   I G+    KM  A   +++M + G+ PN   Y  L+ G+ +A     A  + + +
Sbjct: 456 TFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHL 515

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
              GV P   T           G  +EA +V    +E
Sbjct: 516 HALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKE 552



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 164/333 (49%), Gaps = 2/333 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G    A  +F+ + E+G  P  +TY+T++    + +      SL  ++   G++P 
Sbjct: 604 LCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPH 663

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           S ++NA+++ C + G++++AM +F++M   G   TT ++NTLI GY    K +E+ +L Q
Sbjct: 664 SFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQ 722

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K + P+  TY  ++   C    +EEA  +  +M    +  D VTY +L   Y + 
Sbjct: 723 EMIA-KQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKL 781

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G++     +  +M    V+P+E T G+++  +CKE N+ +A +    +    +     + 
Sbjct: 782 GQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIH 841

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           + LI      +D     K L  M E G+KP +   ST++ ++  AG M +   +F+ +  
Sbjct: 842 DLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKS 901

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
            G+ PD      L  G +   + + A +++  +
Sbjct: 902 LGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 934


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 113/431 (26%), Positives = 220/431 (51%), Gaps = 4/431 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A ++   L + G  P +ITY  L++   +     + L ++ ++    + PD + +
Sbjct: 106 GKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTY 162

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++    +SG + +AM++  +     C P   TY  LI+         +++KLL  M +
Sbjct: 163 NTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEM-R 221

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +K  KP+  TYN+L+   C +  ++EA   +  M + G QP+ +T+N + R+    G   
Sbjct: 222 NKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWM 281

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            AE++L +M      P+  T  I+++  C++G +  A+  L +M      PN + +N L+
Sbjct: 282 DAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLL 341

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            GF   K  D   + L +M   G  PD+VT++T++ A    G +    EI + +   G  
Sbjct: 342 HGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCS 401

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P +  ++ +  G  + G+ ++A  +L  MR+ G+ P+++ +++++SG     K+  A+  
Sbjct: 402 PVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKF 461

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           +  +  +GI PN  TY +++ G  +++Q  RA + L  M  K  +P ++T  ++ +    
Sbjct: 462 FHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAY 521

Query: 428 IGLAREAKRVL 438
            GLA+EA  +L
Sbjct: 522 EGLAKEALDLL 532



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 185/376 (49%), Gaps = 1/376 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +  L   GK  +A  + +  +++   P +ITYT L+ A  ++      + L+ ++   G 
Sbjct: 166 LRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGS 225

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD + +N +IN   + G +DEA+K    M   GC+P   T+N +++   + G+  ++ K
Sbjct: 226 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEK 285

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M + K   P+  T+NIL+   C +  +  A +++ KM   G  P++++YN L   +
Sbjct: 286 LLSDMLR-KGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGF 344

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +  RA + L  M +    P+  T   +++  CK+G ++ A+  L ++      P L
Sbjct: 345 CKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVL 404

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +N++I G   +  ++   K L  M   G+KPD++T+S+++   S  G + +  + F D
Sbjct: 405 ITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHD 464

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +   GI P+   ++ +  G  ++ +  +A   L  M      P    +T +I G      
Sbjct: 465 LEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGL 524

Query: 361 MQRAMSIYEKMCEIGI 376
            + A+ +  ++C  G+
Sbjct: 525 AKEALDLLNELCSRGL 540



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 148/308 (48%), Gaps = 40/308 (12%)

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +R       +E+ +  +  MV  G  PD +   +L R + + G+T +A  ++  ++ +  
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD--------- 252
            P+  T  +++SGYCK G +++A++ L RM    V P++V +N++++   D         
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 180

Query: 253 ------------------------IKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAW 285
                                    K+S GV +A+ L++E    G KPDVVT++ +++  
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKES-GVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 239

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
              G + +  +  ++M   G +P++   +I+ +     G    AE +L+ M + G  P+V
Sbjct: 240 CKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSV 299

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
           V F  +I+  C    + RA+ I EKM   G  PN  +Y  LL G+ + K+  RA E L +
Sbjct: 300 VTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI 359

Query: 406 MEEKGVRP 413
           M  +G  P
Sbjct: 360 MVSRGCYP 367


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 213/415 (51%), Gaps = 1/415 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A +++  +++   + +++T+  ++  L R+ ++K     I  +E  G+KP+ + +N +IN
Sbjct: 201 AWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVIN 260

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
                G  + A KIF+ MKD   KP   TYN+ I       + EE+  +L  + +   V 
Sbjct: 261 GYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLV- 319

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           PN  TYN L+   C+K  +++A+    +M+  GI     TYN L  A         AE M
Sbjct: 320 PNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDM 379

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           + EM+   V P+  T  I ++GYC+ GN + A+     M E  + P +  + SLI  F  
Sbjct: 380 IKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGK 439

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
                  ++      + G+ PD++ F+ ++D     G + +  ++  +M  A + PD   
Sbjct: 440 RNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVT 499

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           F+ L +GY R  + ++A+ +L  M++ G+ P+ + + T+ISG+     M+ A+ ++++M 
Sbjct: 500 FNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEML 559

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
            +G +P L TY  L+ GY +  +   AEELL+ M+ KG+ P  ST   V ++ + 
Sbjct: 560 SLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKT 614



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 214/437 (48%), Gaps = 7/437 (1%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           KP EA    N + E    P   T  +L++ L +  + K    +  ++ K  +K   + FN
Sbjct: 162 KPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFN 221

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            MIN     G   +A      M+  G KP   TYNT+I GY   GK E + K+ + M +D
Sbjct: 222 IMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTM-KD 280

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           KN+KP+  TYN  +   C +  IEEA  V+ K++ SG+ P+AVTYN L       G+  +
Sbjct: 281 KNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDK 340

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A     EM N  +  +  T  +++     E  +E+A   +  M+E  V P++V +N  I 
Sbjct: 341 AFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQIN 400

Query: 249 GFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           G+    ++    KAL+L +E     ++P V T+++++D +     M + +E F   +K G
Sbjct: 401 GYCRCGNAK---KALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEG 457

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + PDI +F+ L  G+   G   +A  +L  M    V P+ V F T++ G+C   K++ A 
Sbjct: 458 MLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAK 517

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            + ++M E GI P+  +Y TL+ GY +      A E+   M   G  P   T   +   +
Sbjct: 518 KLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGY 577

Query: 426 RAIGLAREAKRVLKSAE 442
             IG A  A+ +L+  +
Sbjct: 578 SKIGEADHAEELLREMQ 594



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 185/348 (53%), Gaps = 1/348 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK   A  IF  + ++  +P   TY + ++ L +++R +    ++ K+ + G+ P+++ 
Sbjct: 265 RGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVT 324

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +NA+I+ C   G++D+A     +M + G   +  TYN LI       + EE+  +++ M 
Sbjct: 325 YNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEM- 383

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++K V+P+  TYNI +  +C   + ++A ++  +MV   I+P   TY +L   + +    
Sbjct: 384 REKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRM 443

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             AE+   +     + P+      ++ G+C  GN++ A + L  M   +V P+ V FN+L
Sbjct: 444 SEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTL 503

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           ++G+   +  +   K L  M+E G+KPD ++++T++  +S  G M    E+FD+M+  G 
Sbjct: 504 MQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGF 563

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
           +P +  ++ L +GY + GE   AE +L  M+  G+ P+   +  VI  
Sbjct: 564 DPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEA 611



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 170/345 (49%), Gaps = 1/345 (0%)

Query: 98  TTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
           TT  ++ L+  Y    KP+E+L+ L LM +++ + P   T N L+      N I+ AW V
Sbjct: 146 TTLVFDLLLSAYCQFRKPDEALECLNLMKENE-IIPKTETCNSLLSLLLKLNKIKMAWFV 204

Query: 158 VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
             +MV   I+   VT+N +     + G+  +A+  +  M+   V+PN  T   +++GYC 
Sbjct: 205 YEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCL 264

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
            G  E A +    MK+  + P+   +NS I      +  +     L  + E G+ P+ VT
Sbjct: 265 RGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVT 324

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           ++ ++D   + G + K     D+M+  GI   +  +++L          ++AE ++  MR
Sbjct: 325 YNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMR 384

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
           + GV P+VV +   I+G+C     ++A+S++++M E  I P ++TY +L+  +G+  +  
Sbjct: 385 EKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMS 444

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
            AEE  +   ++G+ P       + D     G    A ++LK  +
Sbjct: 445 EAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMD 489



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 78/127 (61%), Gaps = 1/127 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P  +T+ TL+    R+++ +    L+ ++++ G+KPD I +N +I+  S+ G++ +A+++
Sbjct: 495 PDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEV 554

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F +M   G  PT  TYN LI+GY  +G+ + + +LL+ M Q K + P+D TY  ++ A  
Sbjct: 555 FDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREM-QSKGITPDDSTYLYVIEAMK 613

Query: 147 SKNSIEE 153
           + + + E
Sbjct: 614 TNDDLVE 620


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 113/431 (26%), Positives = 220/431 (51%), Gaps = 4/431 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A ++   L + G  P +ITY  L++   +     + L ++ ++    + PD + +
Sbjct: 163 GKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTY 219

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++    +SG + +AM++  +     C P   TY  LI+         +++KLL  M +
Sbjct: 220 NTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEM-R 278

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +K  KP+  TYN+L+   C +  ++EA   +  M + G QP+ +T+N + R+    G   
Sbjct: 279 NKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWM 338

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            AE++L +M      P+  T  I+++  C++G +  A+  L +M      PN + +N L+
Sbjct: 339 DAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLL 398

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            GF   K  D   + L +M   G  PD+VT++T++ A    G +    EI + +   G  
Sbjct: 399 HGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCS 458

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P +  ++ +  G  + G+ ++A  +L  MR+ G+ P+++ +++++SG     K+  A+  
Sbjct: 459 PVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKF 518

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           +  +  +GI PN  TY +++ G  +++Q  RA + L  M  K  +P ++T  ++ +    
Sbjct: 519 FHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAY 578

Query: 428 IGLAREAKRVL 438
            GLA+EA  +L
Sbjct: 579 EGLAKEALDLL 589



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 185/376 (49%), Gaps = 1/376 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +  L   GK  +A  + +  +++   P +ITYT L+ A  ++      + L+ ++   G 
Sbjct: 223 LRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGS 282

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD + +N +IN   + G +DEA+K    M   GC+P   T+N +++   + G+  ++ K
Sbjct: 283 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEK 342

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M + K   P+  T+NIL+   C +  +  A +++ KM   G  P++++YN L   +
Sbjct: 343 LLSDMLR-KGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGF 401

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +  RA + L  M +    P+  T   +++  CK+G ++ A+  L ++      P L
Sbjct: 402 CKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVL 461

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +N++I G   +  ++   K L  M   G+KPD++T+S+++   S  G + +  + F D
Sbjct: 462 ITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHD 521

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +   GI P+   ++ +  G  ++ +  +A   L  M      P    +T +I G      
Sbjct: 522 LEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGL 581

Query: 361 MQRAMSIYEKMCEIGI 376
            + A+ +  ++C  G+
Sbjct: 582 AKEALDLLNELCSRGL 597



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 148/308 (48%), Gaps = 40/308 (12%)

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +R       +E+ +  +  MV  G  PD +   +L R + + G+T +A  ++  ++ +  
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD--------- 252
            P+  T  +++SGYCK G +++A++ L RM    V P++V +N++++   D         
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 237

Query: 253 ------------------------IKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAW 285
                                    K+S GV +A+ L++E    G KPDVVT++ +++  
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKES-GVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 296

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
              G + +  +  ++M   G +P++   +I+ +     G    AE +L+ M + G  P+V
Sbjct: 297 CKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSV 356

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
           V F  +I+  C    + RA+ I EKM   G  PN  +Y  LL G+ + K+  RA E L +
Sbjct: 357 VTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI 416

Query: 406 MEEKGVRP 413
           M  +G  P
Sbjct: 417 MVSRGCYP 424


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 113/431 (26%), Positives = 217/431 (50%), Gaps = 4/431 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  I   L   G  P +ITY  +++   +     + LS++ ++    + PD + +
Sbjct: 151 GKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTY 207

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++ +  +SG + +AM++  +M    C P   TY  LI+          ++KLL  M +
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM-R 266

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D+   P+  TYN+LV   C +  ++EA   +  M +SG QP+ +T+N + R+    G   
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            AE++L +M      P+  T  I+++  C++G +  A+  L +M +    PN + +N L+
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            GF   K  D   + L  M   G  PD+VT++T++ A    G +    EI + +   G  
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P +  ++ +  G  +AG+  KA  +L  MR   + P+ + +++++ G     K+  A+  
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           + +   +GI PN  T+ +++ G  +++Q  RA + L  M  +G +P +++  ++ +    
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAY 566

Query: 428 IGLAREAKRVL 438
            G+A+EA  +L
Sbjct: 567 EGMAKEALELL 577



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 195/397 (49%), Gaps = 3/397 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P ++TY T++ +L    + K  + ++ ++ +    PD I +  +I A      V  AMK+
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M+D GC P   TYN L+ G    G+ +E++K L  M      +PN  T+NI++R+ C
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS-SGCQPNVITHNIILRSMC 320

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           S     +A  ++  M+  G  P  VT+N L     + G   RA  +L +M  +  +PN  
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL-DIKDSDGVDKALTL 265
           +   ++ G+CKE  M+ A+ +L RM     +P++V +N+++     D K  D V+  L  
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE-ILNQ 439

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           +   G  P ++T++T++D  + AG  GK  ++ D+M    ++PD   +S L  G  R G+
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A        + G+ PN V F +++ G C + +  RA+     M   G  PN  +Y  
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
           L+ G         A ELL  +  KG+  K S  Q+  
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQVAG 596



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 161/306 (52%), Gaps = 1/306 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  +G+  EA    N +   G +P +IT+  ++ ++    R+     L++ + + G 
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + FN +IN     G +  A+ I +KM   GC+P + +YN L+ G+    K + +++
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L+ M   +   P+  TYN ++ A C    +E+A  ++ ++ + G  P  +TYNT+    
Sbjct: 401 YLERMVS-RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+ G+T +A ++L EM+   ++P+  T   +V G  +EG +++A++F +  + + + PN 
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V FNS++ G    + +D     L  M   G KP+  +++ +++  +  G+  +  E+ ++
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 579

Query: 301 MVKAGI 306
           +   G+
Sbjct: 580 LCNKGL 585



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 172/387 (44%), Gaps = 48/387 (12%)

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNV-GKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
           K++ SG       + TL  GY N  G    S       S + +    D   N  +R    
Sbjct: 62  KVESSGLNGRAQKFETLSSGYSNSNGNGHYS-------SVNSSFALEDVESNNHLRQMVR 114

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
              +EE +  +  MV  G  PD +   TL R + + G+T +A ++L  ++ +   P+  T
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD--------------- 252
             +++SGYCK G + +A+  L RM    V P++V +N++++   D               
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231

Query: 253 ------------------IKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLM 291
                              +DS GV  A+ L++E    G  PDVVT++ +++     G +
Sbjct: 232 QRDCYPDVITYTILIEATCRDS-GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            +  +  +DM  +G +P++   +I+ +     G    AE +L  M + G  P+VV F  +
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I+  C    + RA+ I EKM + G  PN  +Y  LL G+ + K+  RA E L+ M  +G 
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVL 438
            P   T   +  +    G   +A  +L
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEIL 437



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 3/281 (1%)

Query: 159 YKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
           Y  V S    + V  N   R   + GE     + L  M  +   P+   C  ++ G+C+ 
Sbjct: 91  YSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRL 150

Query: 219 GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTF 278
           G    A + L  ++     P+++ +N +I G+    +   ++ AL++++   V PDVVT+
Sbjct: 151 GKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGE---INNALSVLDRMSVSPDVVTY 207

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           +TI+ +   +G + +  E+ D M++    PD+  ++IL +   R      A  +L  MR 
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD 267

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            G  P+VV +  +++G C   ++  A+     M   G  PN+ T+  +L       +   
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327

Query: 399 AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           AE+LL  M  KG  P   T  ++ +     GL   A  +L+
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 216/420 (51%), Gaps = 1/420 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA  + + ++E G +P ++TY ++V  + R       L L+ K+E+  +K D
Sbjct: 158 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 217

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              ++ +I++    G +D A+ +F++M+  G K +  TYN+L++G    GK  +   LL+
Sbjct: 218 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 277

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   + + PN  T+N+L+  +  +  ++EA  +  +M+  GI P+ +TYNTL   Y   
Sbjct: 278 DMVS-REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 336

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                A  ML  M  N+  P+  T   ++ GYC    ++D M+    + +  +  N V +
Sbjct: 337 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 396

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           + L++GF         ++    M   GV PDV+T+  ++D     G + K  EIF+D+ K
Sbjct: 397 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 456

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           + ++  I +++ + +G  + G+ + A ++  S+   GV PNV+ +T +ISG C    +  
Sbjct: 457 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 516

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  +  KM E G  PN  TY TL+  +        + +L++ M+  G     S+I++V D
Sbjct: 517 ANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 576



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 206/405 (50%), Gaps = 1/405 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A+ +   +++ G+ P   T+ TL+  L  + +    + L+ ++ ++G +PD + +N+++N
Sbjct: 132 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 191

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
               SG+   A+ + +KM++   K    TY+T+I      G  + ++ L + M + K +K
Sbjct: 192 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETKGIK 250

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
            +  TYN LVR  C      +   ++  MV+  I P+ +T+N L   + + G+   A ++
Sbjct: 251 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 310

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             EM    + PN  T   ++ GYC +  + +A   L  M   +  P++V F SLIKG+  
Sbjct: 311 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 370

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +K  D   K    + + G+  + VT+S ++  +  +G +   +E+F +MV  G+ PD+  
Sbjct: 371 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 430

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           + IL  G    G+ +KA  I   ++K  +   +VM+TT+I G C   K++ A +++  + 
Sbjct: 431 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 490

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             G+ PN+ TY  ++ G  +      A  LL+ MEE G  P   T
Sbjct: 491 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 535



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/495 (23%), Positives = 231/495 (46%), Gaps = 34/495 (6%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  +A  +F  +I     P+L+ ++   +A+ R K+F  +L    ++E +G+  +    N
Sbjct: 58  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 117

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM--- 125
            MIN          A  +  K+   G +P T+T+NTLIKG    GK  E++ L+  M   
Sbjct: 118 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 177

Query: 126 -------------------------------SQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
                                           +++NVK +  TY+ ++ + C    I+ A
Sbjct: 178 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 237

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
            ++  +M   GI+   VTYN+L R   + G+      +L +M + ++ PN  T  +++  
Sbjct: 238 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 297

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           + KEG +++A      M    + PN++ +N+L+ G+         +  L LM      PD
Sbjct: 298 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 357

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           +VTF++++  +     +    ++F ++ K G+  +   +SIL +G+ ++G+ + AE +  
Sbjct: 358 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 417

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            M  +GV P+V+ +  ++ G C+  K+++A+ I+E + +  ++  +  Y T++ G  +  
Sbjct: 418 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 477

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDE 454
           +   A  L   +  KGV+P   T  ++       G   EA  +L+  EED  +  +    
Sbjct: 478 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYN 537

Query: 455 IAVESIHRKQNLSAS 469
             + +  R  +L+AS
Sbjct: 538 TLIRAHLRDGDLTAS 552



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 136/288 (47%), Gaps = 1/288 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++ V +GK  EA+ ++  +I  G  P +ITY TL+     Q R     +++  + ++  
Sbjct: 295 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 354

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + F ++I        VD+ MK+F+ +   G      TY+ L++G+   GK + + +
Sbjct: 355 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 414

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L Q M     V P+  TY IL+   C    +E+A  +   +  S +    V Y T+    
Sbjct: 415 LFQEMVS-HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 473

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A  +   +    V+PN  T  +++SG CK+G++ +A   L +M+E    PN 
Sbjct: 474 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 533

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
             +N+LI+  L   D     K +  M+  G   D  +   ++D   SA
Sbjct: 534 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSA 581



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 103/257 (40%), Gaps = 33/257 (12%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  KG   EA+ +   + E+G+ P   TY TL+ A  R     +   LI +++  G   D
Sbjct: 508 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 567

Query: 64  S--------ILFNAM----INACSESGNVD----------EAMKI----FQKMKDSGCKP 97
           +        +L +AM    +  C   G+            E +++    F KM       
Sbjct: 568 ASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSSLTFVKMFPCNTIT 627

Query: 98  TTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
           T+   NT+     N  +    L+ L+  S  K  K  +R   +LV        +E+A   
Sbjct: 628 TSLNVNTIEARGMNSAELNRDLRKLRRSSVLKKFK--NRDVRVLVTNELLTWGLEDAECD 685

Query: 158 VYKMVASGIQPDAVTYNTLARAYAQYGE---TYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
           +  MV   +  DAV Y   A    + G       AE++  EM    + PN  T   ++ G
Sbjct: 686 L--MVDLELPTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDG 743

Query: 215 YCKEGNMEDAMRFLYRM 231
           +CKE  +++A + L  M
Sbjct: 744 FCKENRLDEANQMLDLM 760


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 217/438 (49%), Gaps = 7/438 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA  +F+ +  EG +P ++TY TL+  L +     + +  +  +E+   +P 
Sbjct: 134 LCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPT 193

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            ++++ +I++  +   + EA+ +F  M   G  P   TY++LI G   +G  +E+++L  
Sbjct: 194 VVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFY 253

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K + P+  T+N LV A C +  + +A  VV  M+ S ++PD VTYN+L   +   
Sbjct: 254 AMIHRK-IMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLR 312

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E  +   +   M      P+  +   +++GYCK   M+ AM     M +  + P+ V +
Sbjct: 313 SEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTY 372

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N+LI G   +     +  A+ L  E   +G  PD+VT+  + D       + +   +   
Sbjct: 373 NTLIHGLCHVGR---LRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKV 429

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +    ++PDIH++SI+  G  RAGE + A  + + +   G+HP+V  +T +I+G C    
Sbjct: 430 IEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGL 489

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ +M E G +PN  TY  +  G+    +  RA +L Q M  +G     ST  L
Sbjct: 490 LAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTL 549

Query: 421 VADSWRAIGLAREAKRVL 438
           + +     GL +  K++L
Sbjct: 550 LVEMLSDDGLDQSVKQIL 567



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 109/474 (22%), Positives = 215/474 (45%), Gaps = 37/474 (7%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSL-------------------- 51
           +A  +FN ++     P+++ ++ L+ ++TR K + ++LSL                    
Sbjct: 37  DALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILI 96

Query: 52  ---------------ISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCK 96
                          +  + K G +P +  F  +I      G + EA+++F KM   G +
Sbjct: 97  NSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQ 156

Query: 97  PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWN 156
           P   TY TLI G   VG    +++ L+ M Q +N +P    Y+ ++ + C    + EA +
Sbjct: 157 PDVLTYGTLINGLCKVGNTSTAIRFLRSMEQ-RNCRPTVVVYSTIIDSLCKDRQLTEALS 215

Query: 157 VVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
           +   M+A GI P+  TY++L       G    A ++ + M + ++ P++ T   +V   C
Sbjct: 216 LFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALC 275

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           KEG +  A   +  M + ++ P++V +NSL+ G     +          M   G  P V+
Sbjct: 276 KEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVI 335

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           +++T+++ +    +M K   +F++M + G+ PD   ++ L  G    G  + A ++   M
Sbjct: 336 SYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEM 395

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
             YG  P++V +  +    C   ++  AM + + +    ++P++  Y  ++ G   A + 
Sbjct: 396 VVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGEL 455

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
             A +L   +  KG+ P   T  ++ +     GL  EA ++    +E+  S PN
Sbjct: 456 EAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCS-PN 508



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/432 (24%), Positives = 192/432 (44%), Gaps = 42/432 (9%)

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D+A+ +F +M      P+   ++ L+     +      L L + M     +  N  T N
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDS-FGIPHNTYTLN 93

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           IL+ ++C  N +  A++V+  ++  G QP   T+ TL R     G+   A Q+  +M   
Sbjct: 94  ILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGE 153

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
             +P+  T G +++G CK GN   A+RFL  M++    P +VV++++I      KD   +
Sbjct: 154 GFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSL--CKDRQ-L 210

Query: 260 DKALTLMEEFGVK--------------------------------------PDVVTFSTI 281
            +AL+L  +   K                                      PD +TF+T+
Sbjct: 211 TEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTL 270

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +DA    G++ K   + D M+++ ++PD+  ++ L  G+    E  K  ++  +M + G 
Sbjct: 271 VDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGC 330

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
            P+V+ +TT+I+G+C    M +AM ++E+M + G+ P+  TY TL+ G     +   A  
Sbjct: 331 VPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIA 390

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIH 461
           L   M   G  P   T +++ D         EA  +LK  E            I ++ + 
Sbjct: 391 LFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMC 450

Query: 462 RKQNLSASNSTF 473
           R   L A+   F
Sbjct: 451 RAGELEAARDLF 462



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 151/303 (49%), Gaps = 7/303 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G   +AHY+ + +I+   +P ++TY +L+     +      +++   + + G  P 
Sbjct: 274 LCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPS 333

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I +  +IN   +   +D+AM +F++M   G  P T TYNTLI G  +VG+  +++ L  
Sbjct: 334 VISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 393

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M     + P+  TY IL    C  + + EA  ++  +  + + PD   Y+ +     + 
Sbjct: 394 EMVVYGQI-PDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRA 452

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           GE   A  +  ++ +  + P+ RT  I+++G C++G + +A +    M E    PN   +
Sbjct: 453 GELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTY 512

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N + +GFL  ++++ + +A+ L +E    G   DV T + +++  S  GL    ++I  +
Sbjct: 513 NLITRGFL--RNNETL-RAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCE 569

Query: 301 MVK 303
            V+
Sbjct: 570 FVQ 572



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/356 (19%), Positives = 142/356 (39%), Gaps = 70/356 (19%)

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
           N+I++A ++  +M+     P  V ++ L  +  +         +  +M +  +  N  T 
Sbjct: 33  NTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTL 92

Query: 209 GIIVS-----------------------------------GYCKEGNMEDAMRFLYRMKE 233
            I+++                                   G C EG + +A++   +M  
Sbjct: 93  NILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTG 152

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
               P+++ + +LI G   + ++    + L  ME+   +P VV +STI+D+      + +
Sbjct: 153 EGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTE 212

Query: 294 CQEIFDDMVKAGIEPD-------IH----------------------------VFSILAK 318
              +F DM+  GI P+       IH                             F+ L  
Sbjct: 213 ALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVD 272

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
              + G   KA  ++  M +  + P+VV + +++ G C   +M + +++++ M   G  P
Sbjct: 273 ALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVP 332

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           ++ +Y TL+ GY + +   +A  L + M ++G+ P   T   +      +G  R+A
Sbjct: 333 SVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDA 388


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 220/471 (46%), Gaps = 36/471 (7%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA    + +++ G      TYT+L+    R K   +  ++   +   G   + + +
Sbjct: 218 GNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSY 277

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+   E+  VDEA+K+F +M +  C PT  TY  +I     +G+  E+L + + M++
Sbjct: 278 TNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTE 337

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K+ +PN  TY +L+ + C  ++ ++A  ++  M+  G+ P  VTYN L   Y + G + 
Sbjct: 338 -KHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSA 396

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++L  M++N   PN RT   ++ G+C+  N+  AM  L++M E ++ PN+V +N LI
Sbjct: 397 SALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILI 456

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G     D     K L+LM E G+ PD  T+S  +D     GL+ + + +F+ + + GI+
Sbjct: 457 HGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIK 516

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC----------- 356
            +  ++S L  GY + G+      +L  M   G  PN + + ++I G+C           
Sbjct: 517 ANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLL 576

Query: 357 ---------------------NAVK---MQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
                                N +K     +A  ++++M   G +P++  Y   +  Y  
Sbjct: 577 VDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCS 636

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             +   AE L+  M  KG+ P      L  D++   G    A  +LK   E
Sbjct: 637 HGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHE 687



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 208/410 (50%), Gaps = 9/410 (2%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +F+ + E+   PT+ TYT ++ AL +  R    L++  ++ +   +P+   +  +I
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
            +  E  N D+A KI   M + G  P+  TYN LI GY   G    +L++L LM +  N 
Sbjct: 352 CSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLM-ESNNC 410

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PN RTYN L+  +C   +I +A ++++KM+   +QP+ VTYN L     + G+   A +
Sbjct: 411 SPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYK 470

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L  M  + + P+E T  + +   CK G +E+A      +KE  +  N V++++LI G+ 
Sbjct: 471 LLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYC 530

Query: 252 DI-KDSDG---VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            + K SDG   +DK L+     G  P+ +T+++++D +       + + + D M+K  IE
Sbjct: 531 KVGKVSDGRFLLDKMLSA----GCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIE 586

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P    ++IL    ++  E  +A  +   M   G HP+V ++T  I  +C+  +++ A  +
Sbjct: 587 PAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVL 646

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             KM   GI P+   Y   +  YG       A  +L+ M E G  P   T
Sbjct: 647 ICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYT 696



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 198/408 (48%), Gaps = 7/408 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++++   P + T  T+V    +          +SK+ + G+  D+  + ++I     + N
Sbjct: 195 MLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKN 254

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           VD A  IF  M + GC     +Y  LI G+    + +E+LKL   M +D N  P  RTY 
Sbjct: 255 VDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHED-NCWPTVRTYT 313

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           +++ A C      EA N+  +M     QP+  TY  L  +  +      A+++L  M   
Sbjct: 314 VIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEK 373

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            + P+  T   ++ GYCK+G    A+  L  M+     PN   +N LI GF   K+   +
Sbjct: 374 GLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKN---I 430

Query: 260 DKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
            KA++L   M E  ++P+VVT++ ++      G +G   ++   M ++G+ PD   +S+ 
Sbjct: 431 HKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVF 490

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
                + G  ++A S+  S+++ G+  N V+++T+I G+C   K+     + +KM   G 
Sbjct: 491 IDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGC 550

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
            PN  TY +L+ GY + K    A  L+ +M ++ + P   T  ++ D+
Sbjct: 551 VPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDN 598



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 111/470 (23%), Positives = 193/470 (41%), Gaps = 42/470 (8%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  I N ++E+G  P+++TY  L+    ++    S L ++S +E +   P++  +N +I
Sbjct: 362 DAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELI 421

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                  N+ +AM +  KM +   +P   TYN LI G    G    + KLL LM++   V
Sbjct: 422 LGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLV 481

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWN--------------VVY------------------ 159
            P++ TY++ +   C +  +EEA +              V+Y                  
Sbjct: 482 -PDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRF 540

Query: 160 ---KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
              KM+++G  P+++TYN+L   Y +      A  ++  M    + P   T  I++    
Sbjct: 541 LLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLL 600

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           K+   + A     +M     HP++ ++ + I  +         +  +  M   G+ PD +
Sbjct: 601 KDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTM 660

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
            ++  +DA+   G +     I   M + G EP  + +S L K    A   + + S   S 
Sbjct: 661 LYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSD 720

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
              GV  N        S     V  +  + ++ KM E G  PN  TY   + G  +    
Sbjct: 721 LSSGVASN------DFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCL 774

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
             A  L   M+EKG  P +     +      +GL  EA R L    E+R 
Sbjct: 775 EVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRH 824



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 155/348 (44%), Gaps = 1/348 (0%)

Query: 96  KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
           K T   YN L+         +E +K + L   D  V PN  T N +V  +C   ++ EA 
Sbjct: 166 KLTLRCYNMLLMLLSRFLMIDE-MKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAE 224

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
             V K+V +G+  D  TY +L   Y +      A  +   M N     NE +   ++ G+
Sbjct: 225 LYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGF 284

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C+   +++A++   +M E    P +  +  +I     +            M E   +P+V
Sbjct: 285 CEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNV 344

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
            T++ ++ +          ++I + M++ G+ P +  ++ L  GY + G    A  IL+ 
Sbjct: 345 HTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSL 404

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M      PN   +  +I G+C    + +AMS+  KM E  + PN+ TY  L+ G  +   
Sbjct: 405 MESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGD 464

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
              A +LL +M E G+ P + T  +  D+    GL  EA+ + +S +E
Sbjct: 465 LGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKE 512



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 134/309 (43%), Gaps = 7/309 (2%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +AH +F+ ++  G  P +  YT  + A     R K    LI K+   G+ PD++L+   I
Sbjct: 607 QAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFI 666

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +A    G++D A  I ++M + GC+P+  TY+ LIK   N  KP+E     +L      V
Sbjct: 667 DAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSN-AKPKEVSSSSELSDLSSGV 725

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
             ND +       W  +   E   ++  KM   G  P+A TY        + G    A +
Sbjct: 726 ASNDFS-----NCW-RRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHR 779

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +   M+     PNE     ++   C+ G   +A+R+L  M E    P+L     L+ G  
Sbjct: 780 LFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLY 839

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
           D  + +   +      +     D + +  ++D     GL  KC ++F  M   G +    
Sbjct: 840 DEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPK 899

Query: 312 VFSILAKGY 320
            +S+L +G+
Sbjct: 900 TYSMLIEGF 908



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 87/421 (20%), Positives = 163/421 (38%), Gaps = 34/421 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G   EA  +F  L E+G +   + Y+TL+    +  +      L+ K+   G 
Sbjct: 491 IDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGC 550

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+SI +N++I+   +  N  EA  +   M     +P   TY  LI    N+ K +E  +
Sbjct: 551 VPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILID---NLLKDDEFDQ 607

Query: 121 LLQLMSQ--DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
              +  Q       P+   Y   + A+CS   +++A  ++ KM A GI PD + Y     
Sbjct: 608 AHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFID 667

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV-------------------------- 212
           AY ++G    A  +L  M      P+  T   ++                          
Sbjct: 668 AYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVAS 727

Query: 213 ---SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
              S   +  + E  +    +M E    PN   +   I G   +   +   +    M+E 
Sbjct: 728 NDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEK 787

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G  P+   +++++      GL G+     D M++    P +    +L  G    G  +KA
Sbjct: 788 GQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKA 847

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           + +  S  +   + + +++  +I G        +   ++  M   G   + KTY  L+ G
Sbjct: 848 KRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEG 907

Query: 390 Y 390
           +
Sbjct: 908 F 908



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 105/233 (45%), Gaps = 2/233 (0%)

Query: 221 MEDAMRFLY-RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
           M D M+ +Y  M +  V PN+   N+++ G+  + +    +  ++ + + G+  D  T++
Sbjct: 184 MIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYT 243

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
           +++  +     +     IF  M   G   +   ++ L  G+  A    +A  + + M + 
Sbjct: 244 SLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHED 303

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
              P V  +T +I   C   +   A++++++M E    PN+ TY  L+    E      A
Sbjct: 304 NCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDA 363

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK 452
           +++L  M EKG+ P   T   + D +   GL+  A  +L   E +  S PN +
Sbjct: 364 KKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCS-PNAR 415



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 11/210 (5%)

Query: 251 LDIKDSDGVDKALTLME----------EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           L IK +D  + AL ++E           F  K  +  ++ ++   S   ++ + + ++ +
Sbjct: 135 LMIKSTDSSENALFVLEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLE 194

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+   + P+I   + +  GY + G   +AE  ++ + + G+  +   +T++I G+C    
Sbjct: 195 MLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKN 254

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A +I+  M   G   N  +Y  L+ G+ EA++   A +L   M E    P   T  +
Sbjct: 255 VDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTV 314

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           +  +   +G   EA  + K   E +   PN
Sbjct: 315 IIFALCQLGRKTEALNMFKEMTE-KHCQPN 343


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 223/445 (50%), Gaps = 1/445 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA  + + ++E G +P ++TY ++V  + R       L L+ K+E+  +K D
Sbjct: 168 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              ++ +I++    G +D A+ +F++M+  G K +  TYN+L++G    GK  +   LL+
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 287

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   + + PN  T+N+L+  +  +  ++EA  +  +M+  GI P+ +TYNTL   Y   
Sbjct: 288 DMVS-REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                A  ML  M  N+  P+  T   ++ GYC    ++D M+    + +  +  N V +
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 406

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           + L++GF         ++    M   GV PDV+T+  ++D     G + K  EIF+D+ K
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           + ++  I +++ + +G  + G+ + A ++  S+   GV PNV+ +T +ISG C    +  
Sbjct: 467 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  +  KM E G  PN  TY TL+  +        + +L++ M+  G     S+I++V D
Sbjct: 527 ANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586

Query: 424 SWRAIGLAREAKRVLKSAEEDRQSM 448
              +       +  L    + RQ +
Sbjct: 587 MLLSAMKRLTLRYCLSKGSKSRQDL 611



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 206/405 (50%), Gaps = 1/405 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A+ +   +++ G+ P   T+ TL+  L  + +    + L+ ++ ++G +PD + +N+++N
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
               SG+   A+ + +KM++   K    TY+T+I      G  + ++ L + M + K +K
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETKGIK 260

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
            +  TYN LVR  C      +   ++  MV+  I P+ +T+N L   + + G+   A ++
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             EM    + PN  T   ++ GYC +  + +A   L  M   +  P++V F SLIKG+  
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +K  D   K    + + G+  + VT+S ++  +  +G +   +E+F +MV  G+ PD+  
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           + IL  G    G+ +KA  I   ++K  +   +VM+TT+I G C   K++ A +++  + 
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             G+ PN+ TY  ++ G  +      A  LL+ MEE G  P   T
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 117/495 (23%), Positives = 231/495 (46%), Gaps = 34/495 (6%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  +A  +F  +I     P+L+ ++   +A+ R K+F  +L    ++E +G+  +    N
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM--- 125
            MIN          A  +  K+   G +P T+T+NTLIKG    GK  E++ L+  M   
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187

Query: 126 -------------------------------SQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
                                           +++NVK +  TY+ ++ + C    I+ A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
            ++  +M   GI+   VTYN+L R   + G+      +L +M + ++ PN  T  +++  
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           + KEG +++A      M    + PN++ +N+L+ G+         +  L LM      PD
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           +VTF++++  +     +    ++F ++ K G+  +   +SIL +G+ ++G+ + AE +  
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            M  +GV P+V+ +  ++ G C+  K+++A+ I+E + +  ++  +  Y T++ G  +  
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDE 454
           +   A  L   +  KGV+P   T  ++       G   EA  +L+  EED  +  +    
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYN 547

Query: 455 IAVESIHRKQNLSAS 469
             + +  R  +L+AS
Sbjct: 548 TLIRAHLRDGDLTAS 562



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 136/288 (47%), Gaps = 1/288 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++ V +GK  EA+ ++  +I  G  P +ITY TL+     Q R     +++  + ++  
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + F ++I        VD+ MK+F+ +   G      TY+ L++G+   GK + + +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L Q M     V P+  TY IL+   C    +E+A  +   +  S +    V Y T+    
Sbjct: 425 LFQEMVS-HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A  +   +    V+PN  T  +++SG CK+G++ +A   L +M+E    PN 
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
             +N+LI+  L   D     K +  M+  G   D  +   ++D   SA
Sbjct: 544 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSA 591


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 219/438 (50%), Gaps = 7/438 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  +A ++F+ +I EG +P ++TY TL+  L +     + + L+  +E+   +PD
Sbjct: 147 LCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPD 206

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++ ++I++  +   V EA  +F KM   G  P   TY +LI    N+ + +    LL 
Sbjct: 207 VVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLN 266

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K + P+   ++ +V A C +  I EA +VV  M+  G++P+ VTYN L   +   
Sbjct: 267 QMINSK-IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQ 325

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E   A ++   M +N   PN  +   +++GYCK   M+ A      M + E+ PN V +
Sbjct: 326 SEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTY 385

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N+L+ G   +     +  A+ L  E    G  PD+ T+  ++D       + +   +   
Sbjct: 386 NTLMHGLCHVGR---LQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKT 442

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +  + ++PDI +++I+  G  RAGE + A  I +++   G+ PNV  +T +I+G C    
Sbjct: 443 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGL 502

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ +M   G +P+  TY T+  G  + K+  RA +LLQ M  +G     ST  L
Sbjct: 503 LDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTL 562

Query: 421 VADSWRAIGLAREAKRVL 438
           + +      L +  K++L
Sbjct: 563 LVEMLCDDKLDQSVKQIL 580



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 197/415 (47%), Gaps = 1/415 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P + T   L+ +     R     S+++K+ K G++PD+  F  +I      G + +A
Sbjct: 97  GIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDA 156

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +F KM   G +P   TY TLI G   VG    +++LL+ M Q  N +P+   Y  ++ 
Sbjct: 157 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQ-GNCQPDVVVYTSIID 215

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C    + EA+N+  KMV  GI PD  TY +L  +     E      +L +M N+++ P
Sbjct: 216 SLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMP 275

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +      +V   CKEG + +A   +  M    V PN+V +N+L+ G     + D   K  
Sbjct: 276 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVF 335

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M   G  P+V++++T+++ +     M K   +F++M +  + P+   ++ L  G    
Sbjct: 336 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHV 395

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G  Q A ++   M  +G  P++  +  ++   C    +  AM++ + +    ++P+++ Y
Sbjct: 396 GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIY 455

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             ++ G   A +   A ++   +  KG+RP   T  ++ +     GL  EA ++ 
Sbjct: 456 TIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLF 510



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 193/412 (46%), Gaps = 1/412 (0%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P ++ FN ++ + +++        +  +M   G  P   T N LI  + ++ +P  +  +
Sbjct: 65  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           L  + +   ++P+  T+  L+R  C +  I +A ++  KM+  G QP+ VTY TL     
Sbjct: 125 LAKILK-LGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLC 183

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           + G T  A ++L  M+    +P+      I+   CK+  + +A     +M    + P++ 
Sbjct: 184 KVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIF 243

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            + SLI    ++ +   V   L  M    + PDVV FST++DA    G + +  ++ D M
Sbjct: 244 TYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMM 303

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           +  G+EP++  ++ L  G+    E  +A  +  +M   G  PNV+ + T+I+G+C   +M
Sbjct: 304 IIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRM 363

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            +A  ++E+MC+  + PN  TY TL+ G     +   A  L   M   G  P  +T +++
Sbjct: 364 DKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRIL 423

Query: 422 ADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF 473
            D         EA  +LK+ E        +   I ++ + R   L A+   F
Sbjct: 424 LDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIF 475



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 147/303 (48%), Gaps = 7/303 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EAH + + +I  G  P ++TY  L+     Q      + +   +  +G  P+
Sbjct: 287 LCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPN 346

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I +N +IN   +   +D+A  +F++M      P T TYNTL+ G  +VG+ ++++ L  
Sbjct: 347 VISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFH 406

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M     + P+  TY IL+   C K+ ++EA  ++  +  S + PD   Y  +     + 
Sbjct: 407 EMVAHGQI-PDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRA 465

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           GE   A  +   + +  +RPN RT  I+++G C+ G +++A +    M      P+   +
Sbjct: 466 GELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTY 525

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N++ +G L  K++    +A+ L++E    G   DV T + +++      L    ++I  +
Sbjct: 526 NTITQGLLQNKEA---LRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSE 582

Query: 301 MVK 303
            V+
Sbjct: 583 FVQ 585



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 67/300 (22%), Positives = 127/300 (42%), Gaps = 35/300 (11%)

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
           N++++A +   +M+     P  V +N L  + A+  +      +  +M +  + P+  T 
Sbjct: 46  NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL 105

Query: 209 GIIVS-----------------------------------GYCKEGNMEDAMRFLYRMKE 233
            I+++                                   G C EG + DA+    +M  
Sbjct: 106 NILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIG 165

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
               PN+V + +LI G   + +++   + L  ME+   +PDVV +++I+D+      + +
Sbjct: 166 EGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTE 225

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
              +F  MV  GI PDI  ++ L        E +   ++L  M    + P+VV+F+TV+ 
Sbjct: 226 AFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVD 285

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             C   K+  A  + + M   G+ PN+ TY  L+ G+    +   A ++   M   G  P
Sbjct: 286 ALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAP 345


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 216/420 (51%), Gaps = 1/420 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA  + + ++E G +P ++TY ++V  + R       L L+ K+E+  +K D
Sbjct: 168 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              ++ +I++    G +D A+ +F++M+  G K +  TYN+L++G    GK  +   LL+
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 287

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   + + PN  T+N+L+  +  +  ++EA  +  +M+  GI P+ +TYNTL   Y   
Sbjct: 288 DMVS-REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                A  ML  M  N+  P+  T   ++ GYC    ++D M+    + +  +  N V +
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 406

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           + L++GF         ++    M   GV PDV+T+  ++D     G + K  EIF+D+ K
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           + ++  I +++ + +G  + G+ + A ++  S+   GV PNV+ +T +ISG C    +  
Sbjct: 467 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  +  KM E G  PN  TY TL+  +        + +L++ M+  G     S+I++V D
Sbjct: 527 ANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 213/426 (50%), Gaps = 2/426 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A+ +   +++ G+ P   T+ TL+  L  + +    + L+ ++ ++G +PD + +N+++N
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
               SG+   A+ + +KM++   K    TY+T+I      G  + ++ L + M + K +K
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETKGIK 260

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
            +  TYN LVR  C      +   ++  MV+  I P+ +T+N L   + + G+   A ++
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             EM    + PN  T   ++ GYC +  + +A   L  M   +  P++V F SLIKG+  
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +K  D   K    + + G+  + VT+S ++  +  +G +   +E+F +MV  G+ PD+  
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           + IL  G    G+ +KA  I   ++K  +   +VM+TT+I G C   K++ A +++  + 
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ-LVADSWRAIGLA 431
             G+ PN+ TY  ++ G  +      A  LL+ MEE G  P   T   L+    R   L 
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560

Query: 432 REAKRV 437
             AK +
Sbjct: 561 ASAKLI 566



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/496 (24%), Positives = 238/496 (47%), Gaps = 36/496 (7%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSIL------------------- 49
           K  +A  +F  +I     P+L+ ++   +A+ R K+F  +L                   
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 50  ----------------SLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS 93
                           S++ KV K G +PD+  FN +I      G V EA+ +  +M ++
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187

Query: 94  GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
           GC+P   TYN+++ G    G    +L LL+ M +++NVK +  TY+ ++ + C    I+ 
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKM-EERNVKADVFTYSTIIDSLCRDGCIDA 246

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A ++  +M   GI+   VTYN+L R   + G+      +L +M + ++ PN  T  +++ 
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
            + KEG +++A      M    + PN++ +N+L+ G+         +  L LM      P
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           D+VTF++++  +     +    ++F ++ K G+  +   +SIL +G+ ++G+ + AE + 
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M  +GV P+V+ +  ++ G C+  K+++A+ I+E + +  ++  +  Y T++ G  + 
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKD 453
            +   A  L   +  KGV+P   T  ++       G   EA  +L+  EED  +  +   
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546

Query: 454 EIAVESIHRKQNLSAS 469
              + +  R  +L+AS
Sbjct: 547 NTLIRAHLRDGDLTAS 562



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 142/302 (47%), Gaps = 5/302 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++ V +GK  EA+ ++  +I  G  P +ITY TL+     Q R     +++  + ++  
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + F ++I        VD+ MK+F+ +   G      TY+ L++G+   GK + + +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L Q M     V P+  TY IL+   C    +E+A  +   +  S +    V Y T+    
Sbjct: 425 LFQEMVS-HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A  +   +    V+PN  T  +++SG CK+G++ +A   L +M+E    PN 
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +N+LI+  L   D     K +  M+  G   D  +   ++D      L G+  + F D
Sbjct: 544 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML----LSGELDKSFLD 599

Query: 301 MV 302
           M+
Sbjct: 600 ML 601


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 217/435 (49%), Gaps = 4/435 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK  +A  +   L + G  P +ITY  L++   +     S L L+ ++    + PD
Sbjct: 155 LCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMS---VSPD 211

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N ++    +SG + EAM++  +     C P   TY  LI+         +++KLL 
Sbjct: 212 VVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLD 271

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +DK  KP+  TYN+L+   C +  ++EA   +  M + G QP+ +T+N + R+    
Sbjct: 272 EM-RDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCST 330

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    AE+ L EM      P+  T  I+++  C++G +  A+  L +M +    PN + +
Sbjct: 331 GRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSY 390

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N L+      K  +   + L +M   G  PD+VT++T++ A    G +    EI + +  
Sbjct: 391 NPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGS 450

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G  P +  ++ +  G  + G+   A  +L  M+  G+ P+++ ++T++ G     K+  
Sbjct: 451 KGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDE 510

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A++ +  + E+G+ PN  TY +++ G  +A+Q  RA + L  M  +G +P +++  ++ +
Sbjct: 511 AIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIE 570

Query: 424 SWRAIGLAREAKRVL 438
                GLA+EA  +L
Sbjct: 571 GLAYEGLAKEALELL 585



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 199/400 (49%), Gaps = 9/400 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA-CSESGNVDEAMK 85
           P ++TY T++  L    + K  + ++ +  +    PD I +  +I A C ESG V +AMK
Sbjct: 210 PDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESG-VGQAMK 268

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +  +M+D GCKP   TYN LI G    G+ +E+++ L  M      +PN  T+NI++R+ 
Sbjct: 269 LLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPS-YGCQPNVITHNIILRSM 327

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           CS     +A   + +M+  G  P  VT+N L     + G   RA  +L +M  +   PN 
Sbjct: 328 CSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNS 387

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            +   ++   CK+  ME A+ +L  M     +P++V +N+L+      KD   VD A+ +
Sbjct: 388 LSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTAL--CKDGK-VDVAVEI 444

Query: 266 MEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           + + G K   P ++T++T++D  S  G      ++ D+M   G++PDI  +S L  G  R
Sbjct: 445 LNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSR 504

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G+  +A +    + + GV PN + + +++ G C A +  RA+     M   G  P   +
Sbjct: 505 EGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETS 564

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
           Y  L+ G         A ELL  +  +GV  K S  Q+V 
Sbjct: 565 YMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVV 604



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 195/397 (49%), Gaps = 9/397 (2%)

Query: 39  LTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPT 98
           L R    +     +  +   G  PD I   ++I    ++G   +A ++ + ++DSG  P 
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179

Query: 99  TSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVV 158
             TYN LI GY   G+   +L+LL  MS    V P+  TYN ++R  C    ++EA  V+
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRMS----VSPDVVTYNTILRTLCDSGKLKEAMEVL 235

Query: 159 YKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
            + +     PD +TY  L  A  +     +A ++L EM++   +P+  T  ++++G CKE
Sbjct: 236 DRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKE 295

Query: 219 GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTF 278
           G +++A+RFL  M      PN++  N +++           +K L  M   G  P VVTF
Sbjct: 296 GRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTF 355

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           + +++     GL+G+  ++ + M + G  P+   ++ L     +  + ++A   L  M  
Sbjct: 356 NILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVS 415

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            G +P++V + T+++  C   K+  A+ I  ++   G +P L TY T++ G  +  +   
Sbjct: 416 RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDD 475

Query: 399 AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           A +LL  M+ KG++P      ++  S    GL+RE K
Sbjct: 476 AIKLLDEMKGKGLKP-----DIITYSTLVGGLSREGK 507



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 185/376 (49%), Gaps = 1/376 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +  L   GK  EA  + +  ++    P +ITYT L+ A  ++      + L+ ++   G 
Sbjct: 219 LRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGC 278

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD + +N +IN   + G +DEA++    M   GC+P   T+N +++   + G+  ++ K
Sbjct: 279 KPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEK 338

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L  M + K   P+  T+NIL+   C K  I  A +V+ KM   G  P++++YN L  A 
Sbjct: 339 FLAEMIR-KGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHAL 397

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +  RA + L  M +    P+  T   +++  CK+G ++ A+  L ++      P L
Sbjct: 398 CKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVL 457

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +N++I G   +  +D   K L  M+  G+KPD++T+ST++   S  G + +    F D
Sbjct: 458 ITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHD 517

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           + + G++P+   ++ +  G  +A +  +A   L  M   G  P    +  +I G      
Sbjct: 518 LEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGL 577

Query: 361 MQRAMSIYEKMCEIGI 376
            + A+ +  ++C  G+
Sbjct: 578 AKEALELLNELCSRGV 593



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 171/362 (47%), Gaps = 4/362 (1%)

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
           +G ++E  K  + M   G  P      +LI+G    GK  ++ ++++++ +D    P+  
Sbjct: 123 NGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEIL-EDSGAVPDVI 181

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           TYN+L+  +C    I  A  ++ +M  S   PD VTYNT+ R     G+   A ++L   
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDSGKLKEAMEVLDRQ 238

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
              +  P+  T  I++   CKE  +  AM+ L  M++    P++V +N LI G       
Sbjct: 239 MQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 298

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           D   + L  M  +G +P+V+T + I+ +  S G     ++   +M++ G  P +  F+IL
Sbjct: 299 DEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNIL 358

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
                R G   +A  +L  M ++G  PN + +  ++   C   KM+RA+   + M   G 
Sbjct: 359 INFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGC 418

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            P++ TY TLL    +  +   A E+L  +  KG  P   T   V D    +G   +A +
Sbjct: 419 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIK 478

Query: 437 VL 438
           +L
Sbjct: 479 LL 480



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 144/307 (46%), Gaps = 38/307 (12%)

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +R       +EE +  +  MV  G  PD +   +L R   + G+T++A +++  ++++  
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD---IKDS-- 256
            P+  T  +++SGYCK G +  A++ L RM    V P++V +N++++   D   +K++  
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAME 233

Query: 257 ---------------------------DGVDKALTLMEEF---GVKPDVVTFSTIMDAWS 286
                                       GV +A+ L++E    G KPDVVT++ +++   
Sbjct: 234 VLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGIC 293

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
             G + +     + M   G +P++   +I+ +     G    AE  L  M + G  P+VV
Sbjct: 294 KEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVV 353

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            F  +I+  C    + RA+ + EKM + G  PN  +Y  LL    + K+  RA E L +M
Sbjct: 354 TFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIM 413

Query: 407 EEKGVRP 413
             +G  P
Sbjct: 414 VSRGCYP 420



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 121/271 (44%), Gaps = 3/271 (1%)

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           + V  N   R   + GE     + L +M      P+   C  ++ G CK G    A R +
Sbjct: 109 EEVENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVM 168

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
             +++    P+++ +N LI G+    +   +  AL L++   V PDVVT++TI+     +
Sbjct: 169 EILEDSGAVPDVITYNVLISGYCKTGE---IGSALQLLDRMSVSPDVVTYNTILRTLCDS 225

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
           G + +  E+ D  ++    PD+  ++IL +   +     +A  +L  MR  G  P+VV +
Sbjct: 226 GKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 285

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
             +I+G C   ++  A+     M   G  PN+ T+  +L       +   AE+ L  M  
Sbjct: 286 NVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIR 345

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           KG  P   T  ++ +     GL   A  VL+
Sbjct: 346 KGCSPSVVTFNILINFLCRKGLIGRAIDVLE 376



 Score = 38.9 bits (89), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 23/101 (22%), Positives = 47/101 (46%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  EA   F+ L E G +P  ITY +++  L + ++    +  ++ +   G KP    
Sbjct: 505 EGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETS 564

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIK 107
           +  +I   +  G   EA+++  ++   G    +S    ++K
Sbjct: 565 YMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVK 605


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 229/469 (48%), Gaps = 1/469 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  +A  +F  +     RP LI ++ L + + R K++  +L L  ++E  G+  +    +
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            MIN C     +  A     K+   G +P T T++TLI G    G+  E+L+L+  M + 
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
            + KP   T N LV   C    + +A  ++ +MV +G QP+ VTY  + +   + G+T  
Sbjct: 172 GH-KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A ++L +M+  +++ +     II+ G CK+G++++A      M+      +++++ +LI+
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           GF      D   K L  M +  + PDVV FS ++D +   G + + +E+  +M++ GI P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D   ++ L  G+ +  +  KA  +L  M   G  PN+  F  +I+G+C A  +   + ++
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            KM   G+  +  TY TL+ G+ E  +   A+EL Q M  + VRP   + +++ D     
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470

Query: 429 GLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIP 477
           G   +A  + +  E+ +  +      I +  +     +  +   F  +P
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 217/423 (51%), Gaps = 1/423 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  +A  + + ++E G +P  +TY  ++  + +  +    + L+ K+E+  +
Sbjct: 184 VNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKI 243

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K D++ ++ +I+   + G++D A  +F +M+  G K     Y TLI+G+   G+ ++  K
Sbjct: 244 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAK 303

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M + K + P+   ++ L+  +  +  + EA  +  +M+  GI PD VTY +L   +
Sbjct: 304 LLRDMIKRK-ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +  +A  ML  M +    PN RT  I+++GYCK   ++D +    +M    V  + 
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+LI+GF ++   +   +    M    V+PD+V++  ++D     G   K  EIF+ 
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           + K+ +E DI +++I+  G   A +   A  +  S+   GV P+V  +  +I G C    
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ KM E G +PN  TY  L+  +       ++ +L++ ++  G     ST+++
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKM 602

Query: 421 VAD 423
           V D
Sbjct: 603 VVD 605



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 213/446 (47%), Gaps = 14/446 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  EA  + + ++E GH+PTLIT   LV  L    +    + LI ++ + G 
Sbjct: 149 INGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGF 208

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ + +  ++    +SG    AM++ +KM++   K     Y+ +I G    G  + +  
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN 268

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M + K  K +   Y  L+R +C     ++   ++  M+   I PD V ++ L   +
Sbjct: 269 LFNEM-EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   AE++  EM    + P+  T   ++ G+CKE  ++ A   L  M      PN+
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             FN LI G+     ++ +D  L L  +    GV  D VT++T++  +   G +   +E+
Sbjct: 388 RTFNILINGYC---KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F +MV   + PDI  + IL  G    GEP+KA  I   + K  +  ++ ++  +I G CN
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           A K+  A  ++  +   G+ P++KTY  ++ G  +      A+ L + MEE G  P   T
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564

Query: 418 IQLV-------ADSWRAIGLAREAKR 436
             ++        D+ ++  L  E KR
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKR 590



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 146/302 (48%), Gaps = 5/302 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++  V +GK  EA  +   +I+ G  P  +TYT+L+    ++ +      ++  +   G 
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   FN +IN   ++  +D+ +++F+KM   G    T TYNTLI+G+  +GK E + +
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L Q M   + V+P+  +Y IL+   C     E+A  +  K+  S ++ D   YN +    
Sbjct: 444 LFQEMVS-RRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
               +   A  +   +    V+P+ +T  I++ G CK+G++ +A     +M+E    PN 
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +N LI+  L   D+    K +  ++  G   D  T   ++D  S     G+ ++ F D
Sbjct: 563 CTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSD----GRLKKSFLD 618

Query: 301 MV 302
           M+
Sbjct: 619 ML 620


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 231/469 (49%), Gaps = 1/469 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  +A  +F  ++     PT+I +  L   L R K++  +L+L  ++E  G+  D    N
Sbjct: 70  KKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLN 129

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            MIN       +  A     K+   G +P T T+NTL+ G    G+  E+++L+  M   
Sbjct: 130 IMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLS 189

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           ++V P+  T N +V   C K+ + EA +++ +M+A+G QP+  TY  +     + G T  
Sbjct: 190 QHV-PDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTAS 248

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  +L +M++ +++P+  T  II+   CK+G ++DA+ F   M+   +  N+  +NSLI 
Sbjct: 249 ALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIG 308

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
            F      D   + L  M    + P+VVTFS ++D+    G + + ++++++M+  GIEP
Sbjct: 309 SFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEP 368

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           +   ++ L  G        +A  ++  M   G  P++  +  +I+G+C A ++   M ++
Sbjct: 369 NTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLF 428

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            KM   G+  +  TY TL+ G+ ++++   A+++ Q M  +GV P   T  ++ D     
Sbjct: 429 RKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDN 488

Query: 429 GLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIP 477
           G   EA  +L    + +  +      I +  +     +  + S F  +P
Sbjct: 489 GELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLP 537



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 206/417 (49%), Gaps = 1/417 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  EA  + +C++   H P LIT  T+V  L  + R    + LI+++  +G 
Sbjct: 167 LNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGC 226

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+   +  ++N   +SGN   A+ + +KM+    KP   TY  +I      G+ +++L 
Sbjct: 227 QPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALS 286

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M + K +K N  TYN L+ ++CS    ++   ++  M+   I P+ VT++ L  + 
Sbjct: 287 FFSEM-ETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSL 345

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A+ +  EM    + PN  T   ++ G C +  +++A + +  M      P++
Sbjct: 346 VKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDI 405

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +N LI GF   K  D   +    M   G+  D VT+ST++  +  +  +   +++F +
Sbjct: 406 WTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQE 465

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV  G+ P I  ++IL  G    GE ++A  IL  M K  +  ++ ++  +I G CNA K
Sbjct: 466 MVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANK 525

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           +  A S++  +   G+  ++++Y  +L G  +      A+ L + M+E G  P   T
Sbjct: 526 VDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCT 582


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 229/469 (48%), Gaps = 1/469 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  +A  +F  +     RP LI ++ L + + R K++  +L L  ++E  G+  +    +
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            MIN C     +  A     K+   G +P T T++TLI G    G+  E+L+L+  M + 
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
            + KP   T N LV   C    + +A  ++ +MV +G QP+ VTY  + +   + G+T  
Sbjct: 172 GH-KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A ++L +M+  +++ +     II+ G CK+G++++A      M+      +++++ +LI+
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           GF      D   K L  M +  + PDVV FS ++D +   G + + +E+  +M++ GI P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D   ++ L  G+ +  +  KA  +L  M   G  PN+  F  +I+G+C A  +   + ++
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            KM   G+  +  TY TL+ G+ E  +   A+EL Q M  + VRP   + +++ D     
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470

Query: 429 GLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIP 477
           G   +A  + +  E+ +  +      I +  +     +  +   F  +P
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 213/446 (47%), Gaps = 14/446 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  EA  + + ++E GH+PTLIT   LV  L    +    + LI ++ + G 
Sbjct: 149 INGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGF 208

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ + +  ++    +SG    AM++ +KM++   K     Y+ +I G    G  + +  
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN 268

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M + K  K +   Y  L+R +C     ++   ++  M+   I PD V ++ L   +
Sbjct: 269 LFNEM-EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   AE++  EM    + P+  T   ++ G+CKE  ++ A   L  M      PN+
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             FN LI G+     ++ +D  L L  +    GV  D VT++T++  +   G +   +E+
Sbjct: 388 RTFNILINGYC---KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F +MV   + PDI  + IL  G    GEP+KA  I   + K  +  ++ ++  +I G CN
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           A K+  A  ++  +   G+ P++KTY  ++ G  +      A+ L + MEE G  P   T
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564

Query: 418 IQLV-------ADSWRAIGLAREAKR 436
             ++        D+ ++  L  E KR
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKR 590



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 221/443 (49%), Gaps = 10/443 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  +A  + + ++E G +P  +TY  ++  + +  +    + L+ K+E+  +
Sbjct: 184 VNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKI 243

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K D++ ++ +I+   + G++D A  +F +M+  G K     Y TLI+G+   G+ ++  K
Sbjct: 244 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAK 303

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M + K + P+   ++ L+  +  +  + EA  +  +M+  GI PD VTY +L   +
Sbjct: 304 LLRDMIKRK-ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +  +A  ML  M +    PN RT  I+++GYCK   ++D +    +M    V  + 
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+LI+GF ++   +   +    M    V+PD+V++  ++D     G   K  EIF+ 
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           + K+ +E DI +++I+  G   A +   A  +  S+   GV P+V  +  +I G C    
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ KM E G +PN  TY  L+  +       ++ +L++ ++  G     ST++ 
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRF 602

Query: 421 VADSWRAIGLAREAKRVLKSAEE 443
              +           R+LK+  E
Sbjct: 603 ALSTL---------ARMLKAGHE 616



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 221/474 (46%), Gaps = 27/474 (5%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G    A  +FN +  +G +  +I YTTL+       R+     L+  + K  + PD
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + F+A+I+   + G + EA ++ ++M   G  P T TY +LI G+    + +++  +L 
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           LM   K   PN RT+NIL+  +C  N I++   +  KM   G+  D VTYNTL + + + 
Sbjct: 377 LMVS-KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A+++  EM + +VRP+  +  I++ G C  G  E A+    ++++ ++  ++ ++
Sbjct: 436 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY 495

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N +I G  +    D        +   GVKPDV T++ ++      G + +   +F  M +
Sbjct: 496 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQK----------------------AESILTSMRKYGV 341
            G  P+   ++IL + ++  G+  K                      A S L  M K G 
Sbjct: 556 DGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGH 615

Query: 342 HPNVVMFTTVISGWC---NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            P+V  FTT++  +C   NA  +  A ++++ M  +G  PN+ TY T++ G        +
Sbjct: 616 EPDVFTFTTLLRPFCLEENA-SVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQ 674

Query: 399 AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK 452
              +L  M E+G +P   T            L   A  +L+  E D + +  KK
Sbjct: 675 VPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMENDNEDVTTKK 728


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 232/489 (47%), Gaps = 51/489 (10%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+  GK  +AH     L+ +G    + T+   ++ L R  R     ++   + K G  P+
Sbjct: 26  LLKSGKIEKAHRFVEQLLVKG-LCDISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPN 84

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I +NA+++     G + +A  ++++M  +G  P   TYNTL+ G+  VGK +E+LK+  
Sbjct: 85  RITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFD 144

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
             +  +   P+  TYN L+  +C  + ++EA  ++ +MV+  + PD VTYN+L     + 
Sbjct: 145 -GAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKN 203

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE-GNMEDAMRFLYRMKELEVHPNLVV 242
           G    A  ++ +       PN  T   ++SG C+E   +E A + L +M      P++V 
Sbjct: 204 GRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVS 260

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +N+LI G   +    GV +AL L       G +P+V T++ ++D       + +  E+F 
Sbjct: 261 YNALIHG---LAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFS 317

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQ-------------------------------- 327
            +VK G+EPD   +++   G  +AG  +                                
Sbjct: 318 GLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEK 377

Query: 328 ---KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              +AE +L+ M   G  PN + F T+I G C A K ++AM+ +++M + G+ P + TY 
Sbjct: 378 RVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYN 437

Query: 385 TLLWGYGEAKQPWRAEE---LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
            L+ G  +A+Q  R +E   L   M EKG  P   T   + D     G   +A+R+L  A
Sbjct: 438 ILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLL-GA 496

Query: 442 EEDRQSMPN 450
            E +  +PN
Sbjct: 497 MEAKGCIPN 505



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 217/471 (46%), Gaps = 43/471 (9%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA  IF+  ++ G  P ++TY  L+    +  +      ++ ++  + + PD + +
Sbjct: 134 GKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTY 193

Query: 68  NAMINACSESGNVDEAM---------------------------------KIFQKMKDSG 94
           N+++N   ++G VDEA                                  ++ +KM  +G
Sbjct: 194 NSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNG 253

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
           CKP   +YN LI G        E+LKL   + + +  +P   TYNIL+     ++ + EA
Sbjct: 254 CKPDIVSYNALIHGLAREQGVSEALKLFGSVLR-QGYEPEVPTYNILIDGLLKEDRVNEA 312

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
           + +   +V  G++PDA+TY        + G    A  ML +M      P+  +   +++G
Sbjct: 313 FELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVING 372

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GV 271
            CKE  +++A   L  M+     PN + FN+LI G      +    KA+T  +E    GV
Sbjct: 373 LCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCR---AGKWKKAMTTFKEMLKRGV 429

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQE---IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
           KP VVT++ ++D    A   G+ +E   +FD M++ G  PD+  +S L  G  +AG+   
Sbjct: 430 KPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDD 489

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  +L +M   G  PNV  + ++ISG C   K+  A+ ++  M E G  P+  TY T++ 
Sbjct: 490 ARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIIS 549

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
              + +   +A  L     E GV P       + D   A+    EA ++L+
Sbjct: 550 ALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 12/280 (4%)

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
           + VY  +     PDA T   L R+  + G+  +A + + ++    +  +  T  I +SG 
Sbjct: 2   HTVYDKLVRIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGL 60

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C+   + DA      M++    PN + +N+L+ G  +             M + G  PDV
Sbjct: 61  CRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDV 120

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           VT++T++  +   G + +  +IFD  VK G  PD+  ++ L  G+ +A +  +A+ IL  
Sbjct: 121 VTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQR 180

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRA-MSIYEKMCEIGINPNLKTYETLLWGYG-EA 393
           M    + P+VV + ++++G C   ++  A M I +K    G +PN+ TY TL+ G   E 
Sbjct: 181 MVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDK----GFSPNVITYSTLISGLCREL 236

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
           ++   A +LL+ M   G +P      +V+ +    GLARE
Sbjct: 237 RRLESARQLLEKMVLNGCKP-----DIVSYNALIHGLARE 271



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 4/231 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  + +  EA  + + +  +G  P  I++ TL+    R  ++K  ++   ++ K G+
Sbjct: 370 INGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGV 429

Query: 61  KPDSILFNAMINACSES---GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
           KP  + +N +++   ++   G + EA+ +F  M + G  P   TY+ LI G G  GK ++
Sbjct: 430 KPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDD 489

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           + +LL  M + K   PN  TYN L+   C  + ++EA  +   MV  G  PD +TY T+ 
Sbjct: 490 ARRLLGAM-EAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTII 548

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
            A  +     +A  +        V P       ++ G C    +++A++ L
Sbjct: 549 SALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLL 599



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 132/278 (47%), Gaps = 17/278 (6%)

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+  T GI++    K G +E A RF+ ++  ++   ++  FN  I G             
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLL-VKGLCDISTFNIYISGLCRASRIGDAQTV 72

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              M + G  P+ +T++ ++    + G M   Q +++ M+KAG  PD+  ++ L  G+ +
Sbjct: 73  FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G+  +A  I     K G  P+VV +  +I+G+C A K+  A  I ++M    + P++ T
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVT 192

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           Y +L+ G     +  R +E   ++ +KG  P      ++  S    GL RE +R L+SA 
Sbjct: 193 YNSLVNGLC---KNGRVDEARMLIVDKGFSP-----NVITYSTLISGLCRELRR-LESAR 243

Query: 443 EDRQSM---PNKKDEIA----VESIHRKQNLSASNSTF 473
           +  + M     K D ++    +  + R+Q +S +   F
Sbjct: 244 QLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLF 281



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 2/147 (1%)

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
             ++D +V+    PD +   IL +  +++G+ +KA   +  +   G+  ++  F   ISG
Sbjct: 2   HTVYDKLVRI-YSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISG 59

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C A ++  A ++++ M + G  PN  TY  LL G     +   A+ L + M + G  P 
Sbjct: 60  LCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPD 119

Query: 415 KSTIQLVADSWRAIGLAREAKRVLKSA 441
             T   +   +  +G   EA ++   A
Sbjct: 120 VVTYNTLLHGFCKVGKLDEALKIFDGA 146



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 47/85 (55%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G  K  EA  +F  ++E+G  P  ITY T+++AL +Q+     L+L     + G+ P 
Sbjct: 516 LCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPT 575

Query: 64  SILFNAMINACSESGNVDEAMKIFQ 88
           S ++ ++I+       VDEA+K+ Q
Sbjct: 576 SGMYFSLIDGLCAVARVDEALKLLQ 600


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 225/433 (51%), Gaps = 4/433 (0%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSIL---SLISKVEKDGMK 61
           V  G+PH+A  IFN +   G +PTL+T  TL+ AL R     SI    ++ +   K G+K
Sbjct: 135 VACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVK 194

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
            ++  FN +I+         EA+++  KM+D GC P   TYNT++ G    G+  E+  L
Sbjct: 195 INTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDL 254

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           L  M ++K + PN  T+NILV   C    ++EA NV+  M  + + PDA TYN +   + 
Sbjct: 255 LLDM-KNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFC 313

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           + G    A ++  EM+N ++ P+  T   +++G  + G+ E+  + +  M+   + PN V
Sbjct: 314 KQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSV 373

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            +N ++K F+     D VDK +  MEE G  PD+VT++T++      G M +   + D+M
Sbjct: 374 TYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEM 433

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
            + G++ D    + + +   R  +  +A  +L S R+ G   + V + T+I G+    K 
Sbjct: 434 GRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKA 493

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            +A+ ++++M E  I P++ TY +++ G  +  +  +A + L  + E G+ P + T   +
Sbjct: 494 SQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTI 553

Query: 422 ADSWRAIGLAREA 434
              +   G   +A
Sbjct: 554 IHGYCQEGQVEKA 566



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 194/385 (50%), Gaps = 3/385 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   TY  +++   +Q R    + L  ++E   + PD + +N +IN C E G+ +E  K+
Sbjct: 300 PDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKL 359

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            ++M+  G KP + TYN ++K +   GK +E  K ++ M ++    P+  TYN L+   C
Sbjct: 360 IEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKM-EESGCLPDIVTYNTLISWHC 418

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               ++EA+ ++ +M   G++ D VT NT+ RA  +  +   A  +L   +      +E 
Sbjct: 419 KVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEV 478

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI-KDSDGVDKALTL 265
           + G ++ GY K      A+R    MKE E+ P+++ +NS+I G   + K +  +DK   L
Sbjct: 479 SYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDEL 538

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           +E  G+ PD +T++TI+  +   G + K  +  + MV+   +PD+   + L  G  + G 
Sbjct: 539 LES-GLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGM 597

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            +KA  +  +    G   + V + T+I   C   +   A  + E+M E  + P+  TY  
Sbjct: 598 LEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNA 657

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKG 410
           +L G  +A +   AEE +  + EKG
Sbjct: 658 ILGGLTDAGRMKDAEEFISKIAEKG 682



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 141/308 (45%), Gaps = 38/308 (12%)

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY--RAEQMLF-E 195
           +I + A+ +     +A  +  +M   G+QP  +T NTL  A  ++  ++  R  + +F +
Sbjct: 128 DISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTD 187

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
                V+ N  +  I++ G C E    +A+R L +M++                      
Sbjct: 188 FIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRD---------------------- 225

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
                        +G  PD +T++TI+D     G + + +++  DM   G+ P+   F+I
Sbjct: 226 -------------YGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNI 272

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  G  R G  ++A +++  M +  V P+   +  +ISG+C   ++  AM + E+M  + 
Sbjct: 273 LVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLK 332

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           ++P++ TY TL+ G  E        +L++ ME +G++P   T  ++   +   G   E  
Sbjct: 333 LSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVD 392

Query: 436 RVLKSAEE 443
           + ++  EE
Sbjct: 393 KTVRKMEE 400



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 111/225 (49%), Gaps = 1/225 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EAH +       G+    ++Y TL+    + ++    L L  ++++  + P  I +N
Sbjct: 457 KLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYN 516

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           +MI    + G  ++A+    ++ +SG  P   TYNT+I GY   G+ E++ +    M + 
Sbjct: 517 SMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVE- 575

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           KN KP+  T N L+   C +  +E+A  +    ++ G   DAV+YNT+  +  +      
Sbjct: 576 KNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGE 635

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
           A  +L EM+  ++ P+  T   I+ G    G M+DA  F+ ++ E
Sbjct: 636 AFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAE 680



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 110/224 (49%), Gaps = 19/224 (8%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P++ITY +++A L +  +    +  + ++ + G+ PD I +N +I+   + G V++A + 
Sbjct: 510 PSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQF 569

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL-MSQDKNVKPNDRTYNILVRAW 145
             KM +   KP   T NTL+ G    G  E++LKL    +S+ K+V  +  +YN ++ + 
Sbjct: 570 HNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDV--DAVSYNTIILSL 627

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C +    EA++++ +M    + PD  TYN +       G    AE+ + ++       N+
Sbjct: 628 CKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQ 687

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKEL--EVHPNLVVFNSLI 247
                    + + G  +DA     R  E+  E HPN + +++ I
Sbjct: 688 ---------FLELGKRQDA-----RTSEIPQEPHPNAIAYSNKI 717


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 232/453 (51%), Gaps = 14/453 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MNILV  G  ++AH ++  +  EG  P + T+T  + +  R KR  + L L++ +   G 
Sbjct: 118 MNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGC 177

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + +++++  +I+   E     EA ++F KM   G  P  +T+N L+      G  +E  K
Sbjct: 178 ELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEK 237

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIE-------EAWNVVYKMVASGIQPDAVTY 173
           LL  + ++  V PN  T+NI ++  C K  +E       EA N ++KMV  G++PD  TY
Sbjct: 238 LLNKVLKN-GVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTY 296

Query: 174 NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
           NT+   Y++ G+   A ++L + +     P+E T   ++ G C++G+++ A+        
Sbjct: 297 NTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALG 356

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGL 290
             + P++V++N+LIKG   +     V KAL LM +    G+ PD+ T++ +++     G 
Sbjct: 357 KGLKPSIVLYNTLIKG---LSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGC 413

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           +     + +  +  G  PDI  F+ L  GY +  +   A  IL SM  +GV P+V+ + +
Sbjct: 414 VSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNS 473

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +++G C A K +  M  ++ + E G  PN+ TY  L+    +A++   A +LL+ +  +G
Sbjct: 474 ILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRG 533

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           + P   +   V   +   G   EA ++ +  E+
Sbjct: 534 LIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQ 566



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 210/426 (49%), Gaps = 9/426 (2%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA+ +FN ++  G  P + T+  L+  L ++   +    L++KV K+G+ P+   FN  I
Sbjct: 199 EAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFI 258

Query: 72  NACSESG-------NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
                 G        V EA     KM + G +P   TYNT+I GY  VGK +++ ++L+ 
Sbjct: 259 QGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILK- 317

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
            ++ K   P++ TY  L+   C    I+ A  +  + +  G++P  V YNTL +  +Q G
Sbjct: 318 DAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQG 377

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
              +A Q++ +M    + P+  T  ++++G CK G + DA   L         P++  FN
Sbjct: 378 LVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFN 437

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +LI G+      D     L  M   GV PDV+T+++I++    A       E F  +++ 
Sbjct: 438 TLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEK 497

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G  P+I  ++IL +   +A +  +A  +L  +R  G+ P+ V F TVISG+CN   +  A
Sbjct: 498 GCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEA 557

Query: 365 MSIYEKM-CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
             ++ +M  +  I   + TY  ++  + E      A++L   M +KG  P   T +++ D
Sbjct: 558 YQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMID 617

Query: 424 SWRAIG 429
            +  +G
Sbjct: 618 GFCKVG 623



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 215/450 (47%), Gaps = 17/450 (3%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KGK  EA  +F  +      P++ +Y  ++  L     F     +  +++ +G+ PD   
Sbjct: 89  KGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCT 148

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F   I +   +     A+++   M   GC+     Y T+I G+       E+ +L   M 
Sbjct: 149 FTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKML 208

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG-- 184
           +   + P+  T+N L+   C K  ++E   ++ K++ +G+ P+  T+N   +   + G  
Sbjct: 209 R-LGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVL 267

Query: 185 -----ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
                +   AE  L +M N  + P++ T   I+ GY K G ++DA R L   K     P+
Sbjct: 268 EGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPD 327

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
              + SLI G    +D D +D AL L EE    G+KP +V ++T++   S  GL+ K  +
Sbjct: 328 EFTYCSLIIGV--CQDGD-IDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQ 384

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           + +DM K G+ PDI  ++++  G  + G    A ++L +    G  P++  F T+I G+C
Sbjct: 385 LMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYC 444

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
             +KM  A+ I + M   G+ P++ TY ++L G  +A +P    E  +++ EKG  P   
Sbjct: 445 KRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNII 504

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
           T  ++ +S   +  AR+    L   EE R 
Sbjct: 505 TYNILIES---LCKARKVTEALDLLEEIRN 531



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 193/416 (46%), Gaps = 8/416 (1%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA    + ++ +G  P   TY T++   ++  + +    ++   +  G  PD   + ++I
Sbjct: 276 EAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLI 335

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
               + G++D A+ +F++    G KP+   YNTLIKG    G   ++L+L+  MS++  +
Sbjct: 336 IGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKE-GM 394

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  TYN+++   C    + +A N++   +A G  PD  T+NTL   Y +  +   A  
Sbjct: 395 SPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIG 454

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L  M ++ V P+  T   I++G CK    ED M     + E    PN++ +N LI+   
Sbjct: 455 ILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLC 514

Query: 252 DIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA-GIE 307
             +    V +AL L+EE    G+ PD V+F T++  + + G + +  ++F  M +   I 
Sbjct: 515 KARK---VTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRIC 571

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
             +  ++I+   +    +   A+ +   M   G  P+   +  +I G+C    +      
Sbjct: 572 HTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDF 631

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
             K  EIG  P+L T+  ++       +   A  ++ +M   GV P+       AD
Sbjct: 632 LLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVVTIFDAD 687



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/403 (22%), Positives = 168/403 (41%), Gaps = 43/403 (10%)

Query: 82  EAMKIFQKMK-DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           +A+ IF  +K + G K T  TY  +I+  G  G+ +   ++L  M  + +    +  Y  
Sbjct: 22  KALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYVS 81

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
            +R +  K  ++EA +V  +M     +P   +YN +     +YG   +A ++   M++  
Sbjct: 82  AMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEG 141

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           + P+  T  I +  +C+      A+R L  M       N VV+ ++I GF +        
Sbjct: 142 IAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAY 201

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLM-------------GKCQEIF--------- 298
           +    M   G+ P + TF+ +M      G +             G C  +F         
Sbjct: 202 ELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGL 261

Query: 299 --------------------DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
                                 MV  G+EPD   ++ +  GY + G+ Q A  IL   + 
Sbjct: 262 CRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKF 321

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            G  P+   + ++I G C    +  A++++E+    G+ P++  Y TL+ G  +     +
Sbjct: 322 KGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLK 381

Query: 399 AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           A +L+  M ++G+ P   T  LV +    +G   +A  +L +A
Sbjct: 382 ALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAA 424



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 146/292 (50%), Gaps = 10/292 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G   +A+ + N  I +G+ P + T+ TL+    ++ +  + + ++  +   G+
Sbjct: 405 INGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGV 464

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I +N+++N   ++   ++ M+ F+ + + GC P   TYN LI+      K  E+L 
Sbjct: 465 TPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALD 524

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS-GIQPDAVTYNTLARA 179
           LL+ + +++ + P+  ++  ++  +C+   ++EA+ +  +M     I     TYN +  A
Sbjct: 525 LLEEI-RNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINA 583

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           +++  +   A+++  EM +    P+  T  +++ G+CK GN+     FL +  E+   P+
Sbjct: 584 FSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPS 643

Query: 240 LVVFNSLIKGFL---DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
           L  F  +I        + ++ G+   + LM   GV P+ V   TI DA   A
Sbjct: 644 LTTFGRVINCLCVQHRVHEAVGI---VHLMVRTGVVPEAVV--TIFDADKKA 690


>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 819

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 233/489 (47%), Gaps = 34/489 (6%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +P EA  + N +   G  P+++TY +L++A  R       + L +++ + G KPD   + 
Sbjct: 329 RPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK-------- 120
            +++    +G V+ AM IF++M+++GCKP   T+N  IK YGN GK  + +K        
Sbjct: 389 TLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVC 448

Query: 121 -----------LLQLMSQD----------KNVK-----PNDRTYNILVRAWCSKNSIEEA 154
                      LL +  Q+          K +K     P   T+N L+ A+    S E+A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
             V  +M+ +G+ PD  TYNT+  A A+ G   ++E++L EM++ + +PNE T   ++  
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           Y     +         +    + P  V+  +L+            ++A + ++E G  PD
Sbjct: 569 YANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPD 628

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           + T ++++  +    ++GK  E+ D M + G  P +  ++ L   + R+ +  K+E IL 
Sbjct: 629 ITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILR 688

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            +   G+ P+++ + TVI  +C   +M+ A  I+ +M + GI P++ TY T +  Y    
Sbjct: 689 EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADS 748

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDE 454
               A  +++ M + G RP ++T   + D +  +    EAK  ++         P  +D 
Sbjct: 749 MFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKGEDL 808

Query: 455 IAVESIHRK 463
             +E I +K
Sbjct: 809 RLLERIVKK 817



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 202/387 (52%), Gaps = 8/387 (2%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           +++ L ++ R  S  +L + +++DG   D   + ++I+A + SG   EA+ +F+KM++ G
Sbjct: 179 VISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEG 238

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI-EE 153
           CKPT  TYN ++  +G +G P   +  L    +   + P+  TYN L+   C + S+ +E
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSLHQE 297

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A  V  +M A+G   D VTYN L   Y +      A ++L EM+ N   P+  T   ++S
Sbjct: 298 AAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLIS 357

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---G 270
            Y ++G +++AM    +M E    P++  + +L+ GF   + +  V+ A+ + EE    G
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF---ERAGKVESAMNIFEEMRNAG 414

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
            KP++ TF+  +  + + G      +IFD++   G+ PDI  ++ L   + + G   +  
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +   M++ G  P    F T+IS +      ++AM++Y +M + G+ P+L TY T+L   
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAAL 534

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKST 417
                  ++E++L  ME+   +P + T
Sbjct: 535 ARGGMWEQSEKVLAEMEDGRCKPNELT 561



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/472 (25%), Positives = 227/472 (48%), Gaps = 4/472 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L  +G+   A  +FN L E+G    + +YT+L++A     R++  +++  K+E++G 
Sbjct: 180 ISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGC 239

Query: 61  KPDSILFNAMINACSESGNV-DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           KP  I +N ++N   + G   ++   + +KMK  G  P   TYNTLI         +E+ 
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAA 299

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           ++ + M +      +  TYN L+  +   +  +EA  V+ +M  +G  P  VTYN+L  A
Sbjct: 300 QVFEEM-KAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISA 358

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           YA+ G    A ++  +M     +P+  T   ++SG+ + G +E AM     M+     PN
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPN 418

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +  FN+ IK + +      + K    +   G+ PD+VT++T++  +   G+  +   +F 
Sbjct: 419 ICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M +AG  P+   F+ L   Y R G  ++A ++   M   GV P++  + TV++      
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
             +++  +  +M +    PN  TY +LL  Y   K+      L + +    + P+   ++
Sbjct: 539 MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLK 598

Query: 420 LVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIH-RKQNLSASN 470
            +        L  EA+R     +E R   P+     ++ SI+ R+Q +  +N
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKE-RGFSPDITTLNSMVSIYGRRQMVGKAN 649



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 102/433 (23%), Positives = 212/433 (48%), Gaps = 2/433 (0%)

Query: 7   KGKPH-EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
           +G  H EA  +F  +   G     +TY  L+    +  R K  + +++++E +G  P  +
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIV 350

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            +N++I+A +  G +DEAM++  +M + G KP   TY TL+ G+   GK E ++ + + M
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEM 410

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
            ++   KPN  T+N  ++ + ++    +   +  ++   G+ PD VT+NTL   + Q G 
Sbjct: 411 -RNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM 469

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
                 +  EM+     P   T   ++S Y + G+ E AM    RM +  V P+L  +N+
Sbjct: 470 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 529

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           ++         +  +K L  ME+   KP+ +T+ +++ A+++   +G    + +++    
Sbjct: 530 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 589

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           IEP   +   L     +     +AE   + +++ G  P++    +++S +     + +A 
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKAN 649

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            + + M E G  P++ TY +L++ +  +    ++EE+L+ +  KG++P   +   V  ++
Sbjct: 650 EVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAY 709

Query: 426 RAIGLAREAKRVL 438
                 R+A R+ 
Sbjct: 710 CRNTRMRDASRIF 722



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/404 (23%), Positives = 182/404 (45%), Gaps = 58/404 (14%)

Query: 41  RQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS 100
           +QK ++S+L             D+ +   +I+   + G V  A  +F  +++ G      
Sbjct: 163 KQKDYQSML-------------DNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVY 209

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWN---- 156
           +Y +LI  + N G+  E++ + + M +++  KP   TYN+++  +     +   WN    
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKM-EEEGCKPTLITYNVILNVF---GKMGTPWNKITS 265

Query: 157 VVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
           +V KM + GI PDA TYNTL                              TC       C
Sbjct: 266 LVEKMKSDGIAPDAYTYNTLI-----------------------------TC-------C 289

Query: 217 KEGNM-EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           K G++ ++A +    MK      + V +N+L+  +          K L  ME  G  P +
Sbjct: 290 KRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSI 349

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           VT+++++ A++  G++ +  E+ + M + G +PD+  ++ L  G+ RAG+ + A +I   
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEE 409

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           MR  G  PN+  F   I  + N  K    M I++++   G++P++ T+ TLL  +G+   
Sbjct: 410 MRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM 469

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
                 + + M+  G  P++ T   +  ++   G   +A  V +
Sbjct: 470 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 203/430 (47%), Gaps = 4/430 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG---MKPDSILFNAMINACSESG 78
           E G  P + +Y+ L+     +KR +  L L+S +  DG     P+ + +  +I+   ++ 
Sbjct: 157 EFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQ 216

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
            VD A  +FQ M D G +P   TY  LI GY ++GK +E +++LQ MS    ++P+   Y
Sbjct: 217 MVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMST-HGLQPDCYIY 275

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
            +L+   C      EA N+   ++  GI+P+   Y  L   YA  G        L  M  
Sbjct: 276 AVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVG 335

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
           N V P+     I+   Y K+  +++AM    +M++  + PN+V + +LI     +   D 
Sbjct: 336 NGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDD 395

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
                  M + G+ PD+  FS+++    +     K +E+F +++  GI  D   F+ L  
Sbjct: 396 AVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMC 455

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
              R G   +A+ ++  M + GV P+V+ + T++ G C   ++  A  + + +  IG+ P
Sbjct: 456 NLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKP 515

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           +  TY TLL GY +A++   A  L + M  KG+ P   T   +       G   EAK + 
Sbjct: 516 DKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELY 575

Query: 439 KSAEEDRQSM 448
            S    R  M
Sbjct: 576 LSMINSRTQM 585



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/472 (22%), Positives = 208/472 (44%), Gaps = 37/472 (7%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  +I++G RP   TYT L+       ++K ++ ++ ++   G++PD  ++  +++   
Sbjct: 224 VFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLC 283

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           ++G   EA  IF  +   G KP  + Y  L+ GY   G   E    L LM  +  V P+ 
Sbjct: 284 KNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGN-GVSPDH 342

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET--------- 186
             +NI+  A+  K  I+EA ++  KM    + P+ VTY  L  A  + G           
Sbjct: 343 HIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQ 402

Query: 187 --------------------------YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
                                      +AE++ FE+ +  +R +      ++   C+EG 
Sbjct: 403 MIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGR 462

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           + +A R +  M  + V P+++ +N+L+ G       D   K L ++   G+KPD VT++T
Sbjct: 463 VMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNT 522

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++  +  A  +     +F +M+  G+ PD+  ++ +  G  + G   +A+ +  SM    
Sbjct: 523 LLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSR 582

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
              N+  +  +I+G C    +  A  ++  +C   +  ++ T   ++    +  +   A 
Sbjct: 583 TQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAM 642

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK 452
           +L   +   G+ P   T  L+A++    G   E   +  SA E+  + PN +
Sbjct: 643 DLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELF-SAMEENGTAPNSR 693



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 203/417 (48%), Gaps = 9/417 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  EA  IF+ +I +G +P +  Y  L+     +     + S +  +  +G+
Sbjct: 279 LDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGV 338

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES-L 119
            PD  +FN M  A ++   +DEAM IF KM+     P   TY  LI     +G+ +++ L
Sbjct: 339 SPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVL 398

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K  Q++  D+ + P+   ++ LV   C+ +  E+A  + ++++  GI+ D V +NTL   
Sbjct: 399 KFNQMI--DEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCN 456

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G    A++++  M    VRP+  +   +V G+C  G +++A + L  +  + + P+
Sbjct: 457 LCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPD 516

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            V +N+L+ G+   +    +D A +L  E    G+ PDVVT++TI+      G   + +E
Sbjct: 517 KVTYNTLLHGYCKARR---IDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKE 573

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           ++  M+ +  + +I+ ++I+  G  +     +A  +  S+    +  ++     +I    
Sbjct: 574 LYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALL 633

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
              + + AM ++  +   G+ P+++TY  +     +       +EL   MEE G  P
Sbjct: 634 KGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAP 690



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 186/372 (50%), Gaps = 5/372 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  +A   FN +I+EG  P +  +++LV  L    +++    L  +V   G+
Sbjct: 384 IDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGI 443

Query: 61  KPDSILFNA-MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + D++ FN  M N C E G V EA ++   M   G +P   +YNTL+ G+   G+ +E+ 
Sbjct: 444 RLDTVFFNTLMCNLCRE-GRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAA 502

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           KLL ++     +KP+  TYN L+  +C    I++A+++  +M+  G+ PD VTYNT+   
Sbjct: 503 KLLDVIVS-IGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHG 561

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             Q G    A+++   M N++ + N  T  II++G CK   +++A +  + +   ++  +
Sbjct: 562 LFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLD 621

Query: 240 LVVFNSLIKGFLD-IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           +   N +I   L   +  D +D   T+   +G+ PDV T+  I +     G + +  E+F
Sbjct: 622 IFTANIMIGALLKGGRKEDAMDLFATI-SAYGLVPDVETYCLIAENLIKEGSLEELDELF 680

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
             M + G  P+  + + L +  +  G+  +A + L+ + +          + +IS +   
Sbjct: 681 SAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISIYSRG 740

Query: 359 VKMQRAMSIYEK 370
              Q A S+ EK
Sbjct: 741 EYQQLAKSLPEK 752


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 212/423 (50%), Gaps = 19/423 (4%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHR--PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK 61
           L  + K  EA  + + + E+G    P +++Y+T++    ++       +L  K+   G+ 
Sbjct: 94  LCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIP 153

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P+ +  N++I+   +   +D+A  + Q+M D    P  +TYN+LI GY + G+  E++++
Sbjct: 154 PNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRI 213

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           L+ MS+D   +PN  TYN+L+   C      EA  +   M+ SG +PDA TY +L   YA
Sbjct: 214 LKEMSRDGQ-RPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYA 272

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
             G       +   M  N +R N  T  I +  YCK G +++A     +M++L   P++V
Sbjct: 273 TEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIV 332

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            + ++I G   I   D        M + G+ P+++TF+T++  +S  G   K +E+F +M
Sbjct: 333 TYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEM 392

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           +  GI PD+ +F+ +     + G+  +A+ +   M + G  PNVV + T+I G+  A ++
Sbjct: 393 MDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEV 452

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
              M + + M  IG+ P   T+ TLL G                M   G++P   T + +
Sbjct: 453 GEVMKLLDDMLLIGLKPTAVTFNTLLDG----------------MVSMGLKPDVDTCKTL 496

Query: 422 ADS 424
            DS
Sbjct: 497 IDS 499



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 204/414 (49%), Gaps = 2/414 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P + T+  L++            + + ++ K G++ D++ F  ++          +AM I
Sbjct: 11  PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNI 70

Query: 87  -FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD-KNVKPNDRTYNILVRA 144
             ++M + GC P   +Y+TL+KG     K EE+ +L+ +M++D  N  P+  +Y+ ++  
Sbjct: 71  VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHG 130

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +  +  + +A+ +  KM+  GI P+ VT N++     +     +AE +L +M +  + PN
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 190

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   ++ GY   G   +A+R L  M      PN+V +N LI             +   
Sbjct: 191 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFN 250

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M + G KPD  T+ +++  +++ G + +   + D MV+ G+  + H FSI    Y + G
Sbjct: 251 SMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCG 310

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              +A      M++ G  P++V +TTVI G C   ++  AMS + +M + G++PN+ T+ 
Sbjct: 311 RLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFT 370

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           TL+ G+    +  +AEEL   M ++G+ P  +    + D     G   EA+++ 
Sbjct: 371 TLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLF 424



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 142/312 (45%), Gaps = 9/312 (2%)

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K V P+  T+ IL+   C    +   +  + +++ +G++ DAV +  L R       T  
Sbjct: 7   KKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSD 66

Query: 189 AEQMLF-EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE--LEVHPNLVVFNS 245
           A  ++   M      P+  +   ++ G C E   E+A   ++ M E      P++V +++
Sbjct: 67  AMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYST 126

Query: 246 LIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +I GF   K+ D V KA TL   M + G+ P+VVT ++++D       M K + +   M+
Sbjct: 127 VIHGFF--KEGD-VGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMI 183

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
              I P+   ++ L  GY+ +G+  +A  IL  M + G  PNVV +  +I   C +    
Sbjct: 184 DEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHA 243

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A  I+  M + G  P+  TY +LL GY           +  +M + G+R    T  +  
Sbjct: 244 EAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEI 303

Query: 423 DSWRAIGLAREA 434
            ++   G   EA
Sbjct: 304 YAYCKCGRLDEA 315



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 140/303 (46%), Gaps = 19/303 (6%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G   EA  IFN +I+ G +P   TY +L+     +     + ++   + ++GM
Sbjct: 233 IDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGM 292

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL- 119
           + +   F+  I A  + G +DEA   F KM+  G  P   TY T+I G   +G+ ++++ 
Sbjct: 293 RSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMS 352

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +  Q++  D  + PN  T+  L+  +      E+A  + Y+M+  GI PD   +  +   
Sbjct: 353 RFCQMI--DDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDR 410

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G+   A+++   M     +PN  +   ++ GY   G + + M+ L  M  + + P 
Sbjct: 411 LFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPT 470

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            V FN+L+ G                M   G+KPDV T  T++D+    G +     +F 
Sbjct: 471 AVTFNTLLDG----------------MVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFR 514

Query: 300 DMV 302
           +M+
Sbjct: 515 EML 517



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 18/185 (9%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A   F  +I++G  P +IT+TTL+   +   +++    L  ++   G+ PD  +F
Sbjct: 345 GRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIF 404

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM-- 125
            AMI+   + G V EA K+F  M  +G KP   +YNT+I GY   G+  E +KLL  M  
Sbjct: 405 TAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLL 464

Query: 126 ----------------SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
                                +KP+  T   L+ + C    IE+   +  +M+    + D
Sbjct: 465 IGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTD 524

Query: 170 AVTYN 174
            +T N
Sbjct: 525 TITEN 529



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 4/219 (1%)

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
           +V P++  F  LI    D    +    AL  + + G++ D V F+ ++    +       
Sbjct: 8   KVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDA 67

Query: 295 QEI-FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG--VHPNVVMFTTV 351
             I    M + G  PD+  +S L KG     + ++A  ++  M + G    P+VV ++TV
Sbjct: 68  MNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTV 127

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I G+     + +A +++ KM + GI PN+ T  +++ G  + +   +AE +LQ M ++ +
Sbjct: 128 IHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHI 187

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            P  +T   +   + + G   EA R+LK    D Q  PN
Sbjct: 188 MPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQR-PN 225



 Score = 45.8 bits (107), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 19/119 (15%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA  +F+ +   G +P +++Y T++           ++ L+  +   G+KP 
Sbjct: 411 LFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPT 470

Query: 64  SILFNAM-------------------INACSESGNVDEAMKIFQKMKDSGCKPTTSTYN 103
           ++ FN +                   I++C E G +++ + +F++M     K  T T N
Sbjct: 471 AVTFNTLLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITEN 529


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 214/427 (50%), Gaps = 17/427 (3%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L  +  +P ++T+TTL+  L R+ R    ++L+ ++ +DG++P+ I +  +++   + G+
Sbjct: 170 LFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGD 229

Query: 80  VDEAMKIFQKMKD-SGCKPTTSTY-----NTLIKGYGNVGKPEESLKLLQLMSQDKNVKP 133
              A+ + +KM++ S  KP    +       +I G+ + G+  E+ +LLQ M + K + P
Sbjct: 230 TVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISP 289

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           +  TYN L+ A+  +    EA  +  +M+  GI P  +TY+++   + +      AE M 
Sbjct: 290 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMF 349

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
           + M      P+  T   +++GYC+   ++D ++ L+ M E  +  N + + +LI GF  +
Sbjct: 350 YLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQV 409

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA--------- 304
            D +     L  M   GV P+VVT +T++D     G +    E+F  M K+         
Sbjct: 410 GDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHP 469

Query: 305 --GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G+EPD+  ++IL  G +  G+  +AE +   M   G+ P+ + + +VI G C   ++ 
Sbjct: 470 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLD 529

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A  +++ M     +PN+ T+ TL+ GY +A +     EL   M  +G+     T   + 
Sbjct: 530 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 589

Query: 423 DSWRAIG 429
             +R +G
Sbjct: 590 HGFRKVG 596



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 213/460 (46%), Gaps = 34/460 (7%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F  ++     P++I +  L+  + R  R   ++SL  K+E   +  ++  F  ++
Sbjct: 61  DAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILM 120

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                   +  A+  F K+   G  PT  T++TL+ G     +  E+L L   M      
Sbjct: 121 KCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMC----- 175

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KPN  T+  L+   C +  + EA  ++ +M+  G+QP+ +TY T+     + G+T  A  
Sbjct: 176 KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALN 235

Query: 192 MLFEMQN-NQVRPN-------ERTCGIIVSGYCKEGNMEDAMRFLYRMKEL-EVHPNLVV 242
           +L +M+  + ++PN        RTC  +++G+C  G   +A + L  M E  ++ P++V 
Sbjct: 236 LLRKMEEVSHIKPNVVIWPLERRTC--MINGFCSSGRWSEAQQLLQEMLERKKISPDVVT 293

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +N+LI  F+        ++    M   G+ P  +T+S+++D +     +   + +F  M 
Sbjct: 294 YNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMA 353

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G  PDI  F+ L  GY RA        +L  M + G+  N + +TT+I G+C    + 
Sbjct: 354 TKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLN 413

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE-----------KGV 411
            A  + ++M   G+ PN+ T  TLL G  +  +   A E+ + M++            GV
Sbjct: 414 AAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGV 473

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
            P   T  ++       GL  E K +   AEE  + MP++
Sbjct: 474 EPDVQTYNILIS-----GLINEGKFL--EAEELYEEMPHR 506



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 140/285 (49%), Gaps = 11/285 (3%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A ++F  +  +G  P +IT+ TL+A   R KR    + L+ ++ + G+  ++I +  +I+
Sbjct: 345 AEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIH 404

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK--- 129
              + G+++ A  + Q+M  SG  P   T NTL+ G  + GK +++L++ + M + K   
Sbjct: 405 GFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDI 464

Query: 130 -------NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
                   V+P+ +TYNIL+    ++    EA  +  +M   GI PD +TYN++     +
Sbjct: 465 DASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCK 524

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                 A QM   M +    PN  T   +++GYCK G ++D +     M    +  N + 
Sbjct: 525 QSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT 584

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA-WS 286
           + +LI GF  + + +G       M   GV PD +T   ++   WS
Sbjct: 585 YITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWS 629



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 109/244 (44%), Gaps = 10/244 (4%)

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           SG+ +   +EDA+     M      P+++ F  L+   + +   D V      ME   V 
Sbjct: 51  SGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVP 110

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            +  +F+ +M  + S   +      F  + K G  P +  FS L  G        +A  +
Sbjct: 111 CNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDL 170

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              M K    PNVV FTT+++G C   ++  A+++ ++M E G+ PN  TY T++ G  +
Sbjct: 171 FHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCK 226

Query: 393 AKQPWRAEELLQVMEE-KGVRPKKSTIQL-----VADSWRAIGLAREAKRVLKSAEEDRQ 446
                 A  LL+ MEE   ++P      L     + + + + G   EA+++L+   E ++
Sbjct: 227 MGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKK 286

Query: 447 SMPN 450
             P+
Sbjct: 287 ISPD 290


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 215/438 (49%), Gaps = 7/438 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA ++F+ ++ EG +P  +TY TL+  L +    ++ + L+  + +   +P+
Sbjct: 154 LCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPN 213

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I +N +I+   +   V+EA+ IF +M   G  P  STYN++I G     + +    L+ 
Sbjct: 214 VITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMN 273

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D  + PN   +  LV A C +  +  A +VV  M+  G++PD VTY  L   +   
Sbjct: 274 EMV-DSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLR 332

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E   A+++   M      PN  +   +++GYCK   ++ AM     M + E+ PN+V +
Sbjct: 333 SEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTY 392

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N+LI G   +     +  A+ L  E    G  PD+VT+  ++D       + +   +   
Sbjct: 393 NTLIHGLCHVGR---LRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKA 449

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +  + + PDI  ++I+  G  R GE + A  + +S+   G+HP+V  +T +I+G C    
Sbjct: 450 IEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGL 509

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ +M   G +P+  TY  +  G+    +   A +LLQ M  +G     STI L
Sbjct: 510 LAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITL 569

Query: 421 VADSWRAIGLAREAKRVL 438
           + +     GL +  K++L
Sbjct: 570 IVEMLSDDGLDQSVKQIL 587



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 198/414 (47%), Gaps = 1/414 (0%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           T   ++ +     R     S+++K+ K G +PD+  F  +I      G + EA+ +F KM
Sbjct: 111 TLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKM 170

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
              G +P   TY TLI G   VG    +++LL+ M Q KN +PN  TYN ++        
Sbjct: 171 VGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQ-KNCEPNVITYNTIIDCLFKDRQ 229

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           + EA N+  +M+A GI P+  TYN++     ++ E      ++ EM ++++ PN      
Sbjct: 230 VNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTT 289

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           +V   CKEG +  A   +  M +  V P++V + +L+ G     + D  DK    M   G
Sbjct: 290 LVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKG 349

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
             P+V+++ST+++ +     + K   +F++M +  + P+I  ++ L  G    G  + A 
Sbjct: 350 CAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAI 409

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           ++   M   G  P++V +  ++   C    + +AM++ + +    + P++++Y  ++ G 
Sbjct: 410 ALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGM 469

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
               +   A +L   +  KG+ P   T  ++ +     GL  EA ++ +    D
Sbjct: 470 CRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTD 523



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 112/462 (24%), Positives = 207/462 (44%), Gaps = 36/462 (7%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA   FN ++     P+++ +  ++ ++   K + ++LSL  +++  G+  D      +I
Sbjct: 57  EALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVI 116

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N+      VD    +  K+   G +P T+T+ T                           
Sbjct: 117 NSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTT--------------------------- 149

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
                    L+R  C +  I EA ++  KMV  G QP+ VTY TL     + G +  A +
Sbjct: 150 ---------LIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIR 200

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L  M      PN  T   I+    K+  + +A+     M    + PN+  +NS+I G  
Sbjct: 201 LLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLC 260

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
              +   V   +  M +  + P+VV F+T++DA    G++    ++ D M++ G+EPD+ 
Sbjct: 261 KFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVV 320

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++ L  G+    E  +A+ +  +M + G  PNV+ ++T+I+G+C   ++ +AM ++E+M
Sbjct: 321 TYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEM 380

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
           C+  + PN+ TY TL+ G     +   A  L   M   G  P   T +++ D        
Sbjct: 381 CQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHL 440

Query: 432 REAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF 473
            +A  +LK+ E    +   +   I ++ + R   L A+   F
Sbjct: 441 DQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLF 482



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 138/300 (46%), Gaps = 1/300 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G    AH + + +I+ G  P ++TYT L+     +        +   + + G  P+
Sbjct: 294 LCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPN 353

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I ++ +IN   +   +D+AM +F++M      P   TYNTLI G  +VG+  +++ L  
Sbjct: 354 VISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFH 413

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M     + P+  TY IL+   C    +++A  ++  +  S + PD  +YN +     + 
Sbjct: 414 EMVASGQI-PDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRV 472

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           GE   A  +   + +  + P+  T  I+++G C +G + +A +    M      P+   +
Sbjct: 473 GELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTY 532

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N + +GFL   ++    + L  M   G   D  T + I++  S  GL    ++I  + V+
Sbjct: 533 NLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFVQ 592



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/337 (19%), Positives = 140/337 (41%), Gaps = 36/337 (10%)

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
           N+I+EA +   +M+     P  V +  +  + A          +  +M +  +  +  T 
Sbjct: 53  NTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTL 112

Query: 209 GIIVS-----------------------------------GYCKEGNMEDAMRFLYRMKE 233
            I+++                                   G C EG + +A+    +M  
Sbjct: 113 AIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVG 172

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
               PN V + +LI G   + +S    + L  M +   +P+V+T++TI+D       + +
Sbjct: 173 EGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNE 232

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
              IF +M+  GI P++  ++ +  G  +  E +   +++  M    + PNVV+FTT++ 
Sbjct: 233 ALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVD 292

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             C    +  A  + + M + G+ P++ TY  L+ G+    +   A+++   M  KG  P
Sbjct: 293 ALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAP 352

Query: 414 KKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
              +   + + +  I    +A  + +   + R+ +PN
Sbjct: 353 NVISYSTLINGYCKIQRIDKAMYLFEEMCQ-RELVPN 388


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 207/426 (48%), Gaps = 29/426 (6%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  +I+ G RP  + Y   V A    K       L+  + KDGM P    +N ++    
Sbjct: 144 VFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLC 203

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           +   + +A K+F +M      P T TYNTLI GY  VG  EE+L   + M +++NV+ N 
Sbjct: 204 KVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERM-KEQNVECNL 262

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP--------------------------- 168
            TYN L+   C    +++A  V+ +M  SG  P                           
Sbjct: 263 VTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIR 322

Query: 169 -DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
            D  TY  L     + G   +AE++L ++  N V P++ +  I+V+ YC+EG+++ A+  
Sbjct: 323 IDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILT 382

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
             +M+E  + PN + FN++I  F +  + D  +  +  M E GV P V T++++++ +  
Sbjct: 383 TEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQ 442

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
            G   +C E  D+M KAGI+P++  +  L     +  +   AE +L  M   GV PN  +
Sbjct: 443 KGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEI 502

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           +  +I   C+  K++ A   +++M + GI+  L TY TL+ G G   +  +AE+L   M 
Sbjct: 503 YNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMA 562

Query: 408 EKGVRP 413
            KG  P
Sbjct: 563 GKGCNP 568



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/439 (23%), Positives = 215/439 (48%), Gaps = 27/439 (6%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++++G  P++  Y  ++  L + +R K    L  ++ +  M P+++ +N +I+   + G 
Sbjct: 183 MVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGG 242

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS------------- 126
           ++EA+   ++MK+   +    TYN+L+ G    G+ +++ ++L  M              
Sbjct: 243 IEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFV 302

Query: 127 --------------QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT 172
                           K ++ ++RTY IL+   C    IE+A  V+ K+V +G+ P  ++
Sbjct: 303 FDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKIS 362

Query: 173 YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMK 232
           YN L  AY Q G+  +A     +M+   + PN  T   ++S +C+ G ++ A  ++ RM 
Sbjct: 363 YNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMV 422

Query: 233 ELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMG 292
           E  V P +  +NSLI G+          + L  M++ G+KP+V+++ ++++       + 
Sbjct: 423 EKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLI 482

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
             + +  DM+  G+ P+  ++++L +      + + A      M + G+   +V + T+I
Sbjct: 483 DAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLI 542

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
           +G     ++++A  ++ +M   G NP++ TY +L+ GY ++    +  EL   M+  G++
Sbjct: 543 NGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIK 602

Query: 413 PKKSTIQLVADSWRAIGLA 431
           P   T   +  + R  G+ 
Sbjct: 603 PTVGTFHPLIYACRKEGVV 621



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 203/437 (46%), Gaps = 2/437 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  +A  +   L+E G  P+ I+Y  LV A  ++   K  +    ++E+ G+
Sbjct: 332 LNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGL 391

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ I FN +I+   E+G VD A    ++M + G  PT  TYN+LI GYG  G      +
Sbjct: 392 EPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFE 451

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L  M +   +KPN  +Y  L+   C    + +A  V+  M+  G+ P+A  YN L  A 
Sbjct: 452 FLDEMDK-AGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEAS 510

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
               +   A +   EM  + +     T   +++G  + G ++ A     +M     +P++
Sbjct: 511 CSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDV 570

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +NSLI G+    ++    +    M+  G+KP V TF  ++ A    G++    ++F +
Sbjct: 571 ITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVV-TMDKMFQE 629

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M++  + PD  V++ +   Y   G   KA S+   M   GV  + V + ++I  +    +
Sbjct: 630 MLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRR 689

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +     + + M   G+ P + TY  L+ G  + K    A    + M E+G+    S    
Sbjct: 690 VSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQ 749

Query: 421 VADSWRAIGLAREAKRV 437
           +    R  G+ REA+ V
Sbjct: 750 LISGLREEGMLREAQIV 766



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 180/396 (45%), Gaps = 31/396 (7%)

Query: 46  KSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTL 105
           K+  S +S++     KP     + ++  CS S  +DEA  ++  M+  G  P+T + N L
Sbjct: 71  KTAFSSLSELHAHVSKP--FFSDNLLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRL 128

Query: 106 IKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
           ++   +    E++L +   +  D   +P+   Y   V+A      +++ + ++  MV  G
Sbjct: 129 LRTLVDSRHFEKTLAVFADVI-DSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDG 187

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           + P    YN +     +      A ++  EM    + PN  T   ++ GYCK G +E+A+
Sbjct: 188 MGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEAL 247

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP------------ 273
            F  RMKE  V  NLV +NSL+ G       D   + L  ME  G  P            
Sbjct: 248 GFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHS 307

Query: 274 ----------------DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
                           D  T+  +++     G + K +E+   +V+ G+ P    ++IL 
Sbjct: 308 NGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILV 367

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
             Y + G+ +KA      M + G+ PN + F TVIS +C   ++  A +   +M E G++
Sbjct: 368 NAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVS 427

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           P ++TY +L+ GYG+     R  E L  M++ G++P
Sbjct: 428 PTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKP 463



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/424 (23%), Positives = 190/424 (44%), Gaps = 30/424 (7%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP----------------DSI 65
           E+     L+TY +L+  L    R      ++ ++E  G  P                D  
Sbjct: 255 EQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDG 314

Query: 66  LFNA------------MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVG 113
           LF+             ++N     G +++A ++  K+ ++G  P+  +YN L+  Y   G
Sbjct: 315 LFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEG 374

Query: 114 KPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY 173
             ++++   + M +++ ++PN  T+N ++  +C    ++ A   V +MV  G+ P   TY
Sbjct: 375 DVKKAILTTEQM-EERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETY 433

Query: 174 NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
           N+L   Y Q G   R  + L EM    ++PN  + G +++  CK+  + DA   L  M  
Sbjct: 434 NSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIG 493

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
             V PN  ++N LI+    +       +    M + G+   +VT++T+++     G + K
Sbjct: 494 RGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKK 553

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
            +++F  M   G  PD+  ++ L  GY ++   QK   +   M+  G+ P V  F  +I 
Sbjct: 554 AEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIY 613

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             C    +     ++++M ++ + P+   Y  +++ Y E     +A  L Q M ++GV  
Sbjct: 614 A-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDC 672

Query: 414 KKST 417
            K T
Sbjct: 673 DKVT 676



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/306 (23%), Positives = 135/306 (44%), Gaps = 2/306 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L    K  +A  +   +I  G  P    Y  L+ A     + K       ++ + G+
Sbjct: 472 INCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGI 531

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
               + +N +IN    +G V +A  +F +M   GC P   TYN+LI GY      ++ L+
Sbjct: 532 DATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLE 591

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M +   +KP   T++ L+ A C K  +     +  +M+   + PD   YN +  +Y
Sbjct: 592 LYDKM-KILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSY 649

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+ G   +A  +  +M +  V  ++ T   ++  Y ++  + +    +  MK   + P +
Sbjct: 650 AEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKV 709

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +N LIKG  D+KD +G       M E G+  +V     ++      G++ + Q +  +
Sbjct: 710 DTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSE 769

Query: 301 MVKAGI 306
           +   G+
Sbjct: 770 LSIGGL 775


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 217/431 (50%), Gaps = 4/431 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  I   L   G  P +ITY  +++   +     + LS++ ++    + PD + +
Sbjct: 151 GKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTY 207

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++ +  +SG + +AM++  +M    C P   TY  LI+         +++KLL  M +
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEM-R 266

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D+   P+  TYN+LV   C +  ++EA   +  M +SG QP+ +T+N + R+    G   
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            AE++L +M      P+  T  I+++  C++G +  A+  L +M +    PN + +N L+
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLL 386

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            GF   K  D   + L  M   G  PD+VT++T++ A    G +    EI + +   G  
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P +  ++ +  G  +AG+  KA  +L  MR   + P+ + +++++ G     K+  A+  
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           + +   +G+ PN  T+ +++ G  + +Q  RA + L  M  +G +P +++  ++ +    
Sbjct: 507 FHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAY 566

Query: 428 IGLAREAKRVL 438
            G+A+EA  +L
Sbjct: 567 EGMAKEALELL 577



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 204/423 (48%), Gaps = 4/423 (0%)

Query: 2   NILV-GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           N+++ G  K  E +   + L      P ++TY T++ +L    + K  + ++ ++ +   
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I +  +I A      V +AMK+  +M+D GC P   TYN L+ G    G+ +E++K
Sbjct: 236 YPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L  M      +PN  T+NI++R+ CS     +A  ++  M+  G  P  VT+N L    
Sbjct: 296 FLNDMPS-SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G   RA  +L +M  +  +PN  +   ++ G+CKE  M+ A+ +L RM     +P++
Sbjct: 355 CRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414

Query: 241 VVFNSLIKGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           V +N+++     D K  D V+  L  +   G  P ++T++T++D  + AG  GK  ++ D
Sbjct: 415 VTYNTMLTALCKDGKVEDAVE-ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M    ++PD   +S L  G  R G+  +A        + GV PN V F +++ G C   
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTR 533

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           +  RA+     M   G  P   +Y  L+ G         A ELL  +  KG+  + S  Q
Sbjct: 534 QTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLMKRSSAEQ 593

Query: 420 LVA 422
           +  
Sbjct: 594 VAG 596



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 172/386 (44%), Gaps = 46/386 (11%)

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
           +++ SG       ++TL  G+ N              S + +    D   N  +R     
Sbjct: 62  QVESSGLNGRAQKFDTLASGHSNSNGNG------HFSSANSSFVLEDVESNNHLRQLVRT 115

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
             +EE +  +  MV  G  PD +   TL R + + G+T +A ++L  ++ +   P+  T 
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITY 175

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD---------------- 252
            +++SGYCK G + +A+  L RM    V P++V +N++++   D                
Sbjct: 176 NVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232

Query: 253 -----------------IKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMG 292
                             +DS GV +A+ L++E    G  PDVVT++ +++     G + 
Sbjct: 233 RDCYPDVITYTILIEATCRDS-GVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           +  +  +DM  +G +P++   +I+ +     G    AE +L  M + G  P+VV F  +I
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
           +  C    + RA+ I EKM + G  PN  +Y  LL G+ + K+  RA E L+ M  +G  
Sbjct: 352 NFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411

Query: 413 PKKSTIQLVADSWRAIGLAREAKRVL 438
           P   T   +  +    G   +A  +L
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEIL 437



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 118/228 (51%), Gaps = 1/228 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  KG    A  I   + + G +P  ++Y  L+    ++K+    +  + ++   G 
Sbjct: 351 INFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + +N M+ A  + G V++A++I  ++   GC P   TYNT+I G    GK  +++K
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M + K++KP+  TY+ LV     +  ++EA    ++    G++P+AVT+N++    
Sbjct: 471 LLDEM-RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGL 529

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
            +  +T RA   L  M N   +P E +  I++ G   EG  ++A+  L
Sbjct: 530 CKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELL 577



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 125/269 (46%), Gaps = 3/269 (1%)

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           V  N   R   + GE     + L  M  +   P+   C  ++ G+C+ G    A + L  
Sbjct: 103 VESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEV 162

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
           ++     P+++ +N +I G+    +   ++ AL++++   V PDVVT++TI+ +   +G 
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGE---INNALSVLDRMSVSPDVVTYNTILRSLCDSGK 219

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           + +  E+ D M++    PD+  ++IL +   R     +A  +L  MR  G  P+VV +  
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNV 279

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +++G C   ++  A+     M   G  PN+ T+  +L       +   AE+LL  M  KG
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             P   T  ++ +     GL   A  +L+
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILE 368


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 218/408 (53%), Gaps = 1/408 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  KG  H+A +  + ++ +G     ++Y TL+  L +  R  + L L+ +V+   ++P+
Sbjct: 141 LCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPN 200

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++++N +I+   ++  V++A  ++ +M      P   TYN LI G+  V K   ++ L  
Sbjct: 201 AVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFN 260

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M ++ N+ PN  T+NILV  +C +  + +A  V+  M+   I+PD VTYN+L   Y   
Sbjct: 261 KMKKE-NINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSI 319

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +  +A+ +   M +  V  N +    +V+G+CK   +++A+     M+  ++ PN+V +
Sbjct: 320 NKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTY 379

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           +SLI G   +       K +  M + G  P++VT+S+I+DA      + K   +  ++  
Sbjct: 380 SSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKD 439

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GI PD++ ++IL KG  ++G  + A+++   +   G + +V  +T +I G+C+     +
Sbjct: 440 QGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDK 499

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           A+++  KM + G  PN KTYE ++    E  +   AE+LL+ M  +G+
Sbjct: 500 ALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 220/472 (46%), Gaps = 71/472 (15%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L+ +   P    +  ++++L + K   + LSL  ++E +G++ D   FN +IN  S+ G 
Sbjct: 52  LLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGL 111

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKG----------------------------YGN 111
              +  IF K+   G  PT  T+NTLIKG                            YG 
Sbjct: 112 NSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT 171

Query: 112 -------VGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS 164
                  VG+   +L+LL+ +   K V+PN   YN+++   C    + +A+++  +MVA 
Sbjct: 172 LINGLCKVGRITAALQLLKRV-DGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAK 230

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
            I PD  TYN L   ++   +   A  +  +M+   + PN  T  I+V G+CKEG + DA
Sbjct: 231 RICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDA 290

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFL---------DIKDSDG----------------- 258
              L  M + ++ P++V +NSL+ G+          DI DS                   
Sbjct: 291 KVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNG 350

Query: 259 ------VDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
                 VD+A+ L EE   +   P+VVT+S+++D     G +    ++ D+M   G  P+
Sbjct: 351 FCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPN 410

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
           I  +S +     +     KA ++LT+++  G+ P++  +T +I G C + +++ A +++E
Sbjct: 411 IVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFE 470

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            +   G N ++  Y  ++ G+ +     +A  LL  ME+ G  P   T +LV
Sbjct: 471 DLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELV 522



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 38/221 (17%)

Query: 262 ALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
           AL+L   ME  G++ D  TF+ +++ +S  GL      IF  ++K G  P    F+ L K
Sbjct: 80  ALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIK 139

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC---------------------- 356
           G    G   +A      +   G H + V + T+I+G C                      
Sbjct: 140 GLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQP 199

Query: 357 NAVK-------------MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           NAV              +  A  +Y +M    I P++ TY  L+ G+    +   A +L 
Sbjct: 200 NAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLF 259

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
             M+++ + P   T  ++ D +   G   +AK VL    +D
Sbjct: 260 NKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKD 300



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 72/162 (44%)

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           P    F+ I+ +   A        +   M   GIE D   F+IL   + + G    + SI
Sbjct: 59  PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSI 118

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              + K G HP  + F T+I G C    + +A+  ++K+   G + +  +Y TL+ G  +
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCK 178

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
             +   A +LL+ ++ K V+P      ++ D+     L  +A
Sbjct: 179 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDA 220


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 216/422 (51%), Gaps = 5/422 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  +A  +F+ ++ +G +P + TY T++  L +     +   L+ K+E+ G 
Sbjct: 170 INGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGC 229

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ + ++ +I++      V+EA+ IF  MK  G  P   TY +LI+G     + +E+  
Sbjct: 230 QPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASA 289

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M+   N+ P+  T+N+LV  +C +  + EA  V+  M   G++P+ VTY++L   Y
Sbjct: 290 LLNEMTS-LNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGY 348

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           + + +   A ++   M     +PN  +  I+++GYCK   +++AM+    M    + PN 
Sbjct: 349 SLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNN 408

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+LI GF  +            M   G  PD+ T+S ++D +   G +GK   +F  
Sbjct: 409 VSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRA 468

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M    ++P++ +++IL     ++G  + A  + + +   G+ P+V ++TT+I+G C    
Sbjct: 469 MQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGL 528

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG----VRPKKS 416
           +  A+  +  M   G  P+  +Y  ++ G  + K   RA  L+  M ++G    VRP  S
Sbjct: 529 LDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADVRPCLS 588

Query: 417 TI 418
            +
Sbjct: 589 EV 590



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 218/439 (49%), Gaps = 5/439 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P + T +  +    + +R     S+++KV K G++P  + F  +IN   + G   +A
Sbjct: 123 GLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQA 182

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +++F  M   GC+P   TYNT+I G   +G+   +  LL+ M ++   +PN  TY+ L+ 
Sbjct: 183 VELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKM-EEAGCQPNMVTYSTLID 241

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C    + EA ++   M A GI PD  TY +L +   ++     A  +L EM +  + P
Sbjct: 242 SLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMP 301

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T  ++V  +CKEG + +A+  L  M E+ V PN+V ++SL+ G+    D     K  
Sbjct: 302 DIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLF 361

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            +M   G KP++ +++ +++ +  A  + +  ++F++M+  G+ P+   ++ L  G+ + 
Sbjct: 362 HVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQL 421

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+ ++A+ +  +M   G  P++  ++ ++ G+C    + +A  ++  M    + PNL  Y
Sbjct: 422 GKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMY 481

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             L+    ++     A +L   +  +G++P       + +     GL  EA    ++ E 
Sbjct: 482 TILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEA 541

Query: 444 DRQSMPNKKDEIAVESIHR 462
           D    P   DEI+   I R
Sbjct: 542 D--GCP--PDEISYNVIIR 556



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 210/426 (49%), Gaps = 14/426 (3%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +I+ G +PT++T+TTL+  L +   F   + L   +   G +PD   +N +IN   + G 
Sbjct: 154 VIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGE 213

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
              A  + +KM+++GC+P   TY+TLI          E+L +   M + K + P+  TY 
Sbjct: 214 TAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYM-KAKGISPDIFTYT 272

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L++  C  +  +EA  ++ +M +  I PD VT+N L   + + G+   A  +L  M   
Sbjct: 273 SLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEM 332

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            V PN  T   ++ GY    ++ +A +  + M      PN+  +N LI G+   K    +
Sbjct: 333 GVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKR---I 389

Query: 260 DKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           D+A+ L  E    G+ P+ V+++T++  +   G + + Q++F +M   G  PD+  +SIL
Sbjct: 390 DEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSIL 449

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G+ + G   KA  +  +M+   + PN+VM+T ++   C +   + A  ++ ++   G+
Sbjct: 450 LDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGL 509

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA-------DSWRAIG 429
            P+++ Y T++ G  +      A E  + ME  G  P + +  ++        D  RA+ 
Sbjct: 510 QPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALL 569

Query: 430 LAREAK 435
           L  E +
Sbjct: 570 LVGEMR 575



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 211/426 (49%), Gaps = 8/426 (1%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSI-LSLISKVEKDGMKPDSILFNAMINACS 75
           FN ++     P +I +  L++A+ +  ++  + +SL  ++E  G+ P+    +  +N   
Sbjct: 80  FNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFC 139

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           +   VD    +  K+   G +PT  T+ TLI G   VG+  ++++L   M   K  +P+ 
Sbjct: 140 QLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVA-KGCQPDV 198

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TYN ++   C       A  ++ KM  +G QP+ VTY+TL  +  +      A  +   
Sbjct: 199 YTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSY 258

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL---D 252
           M+   + P+  T   ++ G CK    ++A   L  M  L + P++V FN L+  F     
Sbjct: 259 MKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGK 318

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           + ++ GV K +T   E GV+P+VVT+S++M  +S    + + +++F  M+  G +P+I  
Sbjct: 319 VSEALGVLKTMT---EMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFS 375

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++IL  GY +A    +A  +   M   G+ PN V + T+I G+C   K++ A  ++  MC
Sbjct: 376 YNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMC 435

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
             G  P+L TY  LL G+ +     +A  L + M+   ++P      ++  +    G  +
Sbjct: 436 TNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHK 495

Query: 433 EAKRVL 438
           +A+++ 
Sbjct: 496 DARKLF 501



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 176/369 (47%)

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +A S   N+D+A+  F  M      P    +  L+     +G+  + +  L    +   +
Sbjct: 65  DASSSFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGL 124

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PN  T +I +  +C    ++  ++V+ K++  G+QP  VT+ TL     + GE  +A +
Sbjct: 125 SPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVE 184

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  +M     +P+  T   I++G CK G    A   L +M+E    PN+V +++LI    
Sbjct: 185 LFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLC 244

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
             +  +      + M+  G+ PD+ T+++++          +   + ++M    I PDI 
Sbjct: 245 RDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIV 304

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            F++L   + + G+  +A  +L +M + GV PNVV +++++ G+     +  A  ++  M
Sbjct: 305 TFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVM 364

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
              G  PN+ +Y  L+ GY +AK+   A +L   M  +G+ P   +   +   +  +G  
Sbjct: 365 ITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKL 424

Query: 432 REAKRVLKS 440
           REA+ + ++
Sbjct: 425 REAQDLFRN 433



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 1/234 (0%)

Query: 211 IVSGYCKEGNMEDAMRFLYRMKEL-EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
           ++S   K G   D +  L +  EL  + PN+   +  +  F  ++  D     L  + + 
Sbjct: 98  LLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKL 157

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G++P +VTF+T+++     G   +  E+FDDMV  G +PD++ ++ +  G  + GE   A
Sbjct: 158 GLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAA 217

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             +L  M + G  PN+V ++T+I   C    +  A+ I+  M   GI+P++ TY +L+ G
Sbjct: 218 AGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQG 277

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             +  +   A  LL  M    + P   T  ++ D++   G   EA  VLK+  E
Sbjct: 278 LCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTE 331


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 222/429 (51%), Gaps = 9/429 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  KG+  +A    + ++  G     I+Y TL+  L +    ++ L L+ +V+ + ++P+
Sbjct: 165 LCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPN 224

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++N +I++  +   V+EA  +F +M   G  P   TY+ LI G+  +GK ++++ L  
Sbjct: 225 VVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFN 284

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  + N+KP+  T+NILV A+C    ++E   V   M+  GI+P+ VTYN+L   Y   
Sbjct: 285 KMILE-NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLV 343

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E  +A+ +   M    V P+ ++  I+++G+CK    ++AM     M    + P++V +
Sbjct: 344 KEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTY 403

Query: 244 NSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +SLI G   +  S  +  AL L   M + GV P++ T+++I+DA      + K   +   
Sbjct: 404 SSLIDG---LSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTK 460

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
               G +PDI  +SIL KG  ++G+ + A  +   +   G + +V  +T +I G+C    
Sbjct: 461 FKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGL 520

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
              A+++  KM + G  P+ KTYE ++    +  +   AE+LL+ M  +G+      + L
Sbjct: 521 FNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNFYDLYL 580

Query: 421 --VADSWRA 427
             +A +W  
Sbjct: 581 TRLAQTWHG 589



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 124/489 (25%), Positives = 229/489 (46%), Gaps = 40/489 (8%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +FN L+     P    +  ++ +L + K + ++L L  K+E  G+KP+ +  N +I
Sbjct: 68  DAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILI 127

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG----------------------- 108
           N   + G +  A  +F K+   G  P T T+ TL KG                       
Sbjct: 128 NCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFH 187

Query: 109 -----YGN-------VGKPEESLKLLQLMSQDKN-VKPNDRTYNILVRAWCSKNSIEEAW 155
                YG        VG+   +L LLQ +  D N V+PN   YN ++ + C    + EA+
Sbjct: 188 FDQISYGTLIHGLCKVGETRAALDLLQRV--DGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
           ++  +MV+ GI PD VTY+ L   +   G+   A  +  +M    ++P+  T  I+V+ +
Sbjct: 246 DLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAF 305

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           CK+G M++       M +  + PN V +NSL+ G+  +K+ +        M + GV PD+
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
            ++S +++ +       +   +F +M +  I PD+  +S L  G  ++G    A  ++  
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M   GV PN+  + +++   C   ++ +A+++  K  + G  P++ TY  L+ G  ++ +
Sbjct: 426 MHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGK 485

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKD-E 454
              A ++ + +  KG         ++   +   GL  EA  +L S  ED   +P+ K  E
Sbjct: 486 LEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALL-SKMEDNGCIPDAKTYE 544

Query: 455 IAVESIHRK 463
           I + S+ +K
Sbjct: 545 IIILSLFKK 553



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 209/427 (48%), Gaps = 10/427 (2%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           FN +     +   I+Y++              +SL +++ +    P +  FN ++ +  +
Sbjct: 38  FNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVK 97

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
           S +    + + QKM+  G KP     N LI  +  +G    +  +   + +   V P+  
Sbjct: 98  SKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYV-PDTI 156

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           T+  L +  C K  I++A+    K+VA G   D ++Y TL     + GET  A  +L  +
Sbjct: 157 TFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV 216

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI-KD 255
             N V+PN      I+   CK   + +A      M    + P++V +++LI GF  + K 
Sbjct: 217 DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKL 276

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D +D    ++ E  +KPDV TF+ +++A+   G M + + +FD M+K GI+P+   ++ 
Sbjct: 277 KDAIDLFNKMILE-NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNS 335

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  GY    E  KA+SI  +M + GV+P++  ++ +I+G+C   K   AM+++++M    
Sbjct: 336 LMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN 395

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW-------RAI 428
           I P++ TY +L+ G  ++ +   A +L+  M ++GV P   T   + D+        +AI
Sbjct: 396 IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAI 455

Query: 429 GLAREAK 435
            L  + K
Sbjct: 456 ALLTKFK 462



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/343 (20%), Positives = 152/343 (44%), Gaps = 35/343 (10%)

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           K N  +Y+     + S N +++A ++  +++     P A  +N +  +  +    +    
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 192 MLFEMQNNQVRPNERTCGIIVS-----------------------------------GYC 216
           +  +M+   ++PN   C I+++                                   G C
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLC 166

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
            +G ++ A  F  ++  L  H + + + +LI G   + ++      L  ++   V+P+VV
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
            ++TI+D+     L+ +  ++F +MV  GI PD+  +S L  G+   G+ + A  +   M
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM 286

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
               + P+V  F  +++ +C   KM+   ++++ M + GI PN  TY +L+ GY   K+ 
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            +A+ +   M + GV P   +  ++ + +  I    EA  + K
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFK 389



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 129/267 (48%), Gaps = 5/267 (1%)

Query: 1   MNILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
            NILV      GK  E   +F+ ++++G +P  +TY +L+      K      S+ + + 
Sbjct: 298 FNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMA 357

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           + G+ PD   ++ MIN   +    DEAM +F++M      P   TY++LI G    G+  
Sbjct: 358 QGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRIS 417

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
            +L+L+  M  D+ V PN  TYN ++ A C  + +++A  ++ K    G QPD  TY+ L
Sbjct: 418 YALQLVDQM-HDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSIL 476

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
            +   Q G+   A ++  ++       +     I++ G+C EG   +A+  L +M++   
Sbjct: 477 IKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGC 536

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKAL 263
            P+   +  +I       ++D  +K L
Sbjct: 537 IPDAKTYEIIILSLFKKDENDMAEKLL 563


>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
 gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
          Length = 844

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 219/421 (52%), Gaps = 1/421 (0%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           V  G   E   + + +  +G  P  +TYTT++ A  R  +    L L ++++K G  P+ 
Sbjct: 384 VRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNV 443

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
             +N+++    +    +E +KI   M+ +GC P   T+NTL+   G+ GK +    + + 
Sbjct: 444 CTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFRE 503

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M ++   +P   T+N L+ A+    S  +A  +  +M+ +G  P A TYN L  A A+ G
Sbjct: 504 M-KNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRG 562

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +   AE +L +M+N   +PNE +  +++  Y K GN+    R    + + ++ P+ V+  
Sbjct: 563 DWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLR 622

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +LI      +   G+++A   + + G KPD+V F++++  ++   +  + Q++ D + ++
Sbjct: 623 TLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRES 682

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G++PD+  ++ L   Y R GE  KAE IL  + K G  P++V + T+I G+C    MQ A
Sbjct: 683 GLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEA 742

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           + +  +M   GI P + TY T + GY         +E++  M +K  +P + T +++ D 
Sbjct: 743 IRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDG 802

Query: 425 W 425
           +
Sbjct: 803 Y 803



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 228/502 (45%), Gaps = 72/502 (14%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDGMKPDSIL 66
           GK  +A  +F  + + G  P+L+TY  ++    +  R +  IL L+ ++  +G++ D   
Sbjct: 246 GKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFT 305

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            + +I+AC   G ++EA + F ++K SG +P T TYN L++ +G  G   E+L +L+ M 
Sbjct: 306 CSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEM- 364

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +D N   +  TYN LV A+      EE   V+  M   G+ P+AVTY T+  AY + G+ 
Sbjct: 365 EDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKE 424

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A Q+  +M+ +   PN  T   I++   K+   E+ ++ L  M+     PN + +N+L
Sbjct: 425 VKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTL 484

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +    D      V+     M+  G +P   TF+T++ A+   G      +++D+M+KAG 
Sbjct: 485 LAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGF 544

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW----------- 355
            P    ++ L     R G+ + AES+L  MR  G  PN   F+ ++  +           
Sbjct: 545 TPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLER 604

Query: 356 --------------------------CNAVK-MQRA------------MSIYEKMCEI-- 374
                                     C AV+ M+RA            M I+  M  I  
Sbjct: 605 IGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFA 664

Query: 375 ------------------GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
                             G+ P+L TY +L+  Y    + W+AEE+L+ + + G  P   
Sbjct: 665 KNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLV 724

Query: 417 TIQLVADSWRAIGLAREAKRVL 438
           +   +   +   GL +EA RV+
Sbjct: 725 SYNTIIKGFCRQGLMQEAIRVM 746



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/395 (23%), Positives = 181/395 (45%), Gaps = 36/395 (9%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  +FN + + G  P + TY +++A L ++ R + ++ ++S +  +G  P+ I +
Sbjct: 422 GKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITW 481

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++  C + G       +F++MK+ G +P   T+NTLI  YG  G   ++ K+   M +
Sbjct: 482 NTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMK 541

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                P   TYN L+ A   +   + A +V+  M   G +P+  +++ +   YA+ G   
Sbjct: 542 -AGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVR 600

Query: 188 RAEQM--------LF---------------------------EMQNNQVRPNERTCGIIV 212
             E++        +F                           E+  N  +P+      ++
Sbjct: 601 GLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSML 660

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           S + K    E A + L  ++E  + P+LV +NSL+  +    +    ++ L  + + G  
Sbjct: 661 SIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGES 720

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           PD+V+++TI+  +   GLM +   +  +M   GI P I  ++    GY   G   + + +
Sbjct: 721 PDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEV 780

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           ++ M +    PN + +  ++ G+C A K Q AM  
Sbjct: 781 ISYMIQKNCKPNELTYKIIVDGYCKARKYQDAMDF 815



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/419 (24%), Positives = 191/419 (45%), Gaps = 7/419 (1%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           ++  L R+ ++   L L+ K+  D    D      +++A S +G   +A+ +F++MKD G
Sbjct: 203 MIRILGRESKYSIALKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCG 262

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN--VKPNDRTYNILVRAWCSKNSIE 152
             P+  TYN ++  YG +G+  +  K+L L+ + +N  ++ ++ T + ++ A   +  I 
Sbjct: 263 LSPSLVTYNVMLDVYGKMGRSWD--KILDLLDEMRNEGLQFDEFTCSTVISACGREGLIN 320

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           EA     ++ +SG +P  VTYN L + + + G    A  +L EM++N    +  T   +V
Sbjct: 321 EAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELV 380

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           + Y + G  E+    +  M    V PN V + ++I  +          +    M++ G  
Sbjct: 381 AAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCV 440

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           P+V T+++I+          +  +I  DM   G  P+   ++ L       G+ +    +
Sbjct: 441 PNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHV 500

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              M+  G  P    F T+IS +        A  +Y++M + G  P   TY  LL     
Sbjct: 501 FREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALAR 560

Query: 393 AKQPWR-AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            +  W+ AE +L  M  KG +P +++  L+   +   G  R  +R+ K    D Q  P+
Sbjct: 561 -RGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDI-YDGQIFPS 617



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 113/212 (53%), Gaps = 7/212 (3%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P+ +   TL+ A  + +  + +     ++ K+G KPD ++FN+M++  +++   + A K+
Sbjct: 616 PSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKM 675

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVG---KPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
              +++SG +P   TYN+L+  Y   G   K EE LK L    +     P+  +YN +++
Sbjct: 676 LDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGE----SPDLVSYNTIIK 731

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +C +  ++EA  V+ +M   GI P   TYNT    YA  G     ++++  M     +P
Sbjct: 732 GFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKP 791

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
           NE T  IIV GYCK    +DAM F++ +K ++
Sbjct: 792 NELTYKIIVDGYCKARKYQDAMDFIFGIKNID 823



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 141/304 (46%), Gaps = 50/304 (16%)

Query: 157 VVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
           VV   V+  ++ D+     + R   +  +   A ++L ++  ++   + R C  I+  Y 
Sbjct: 184 VVSNSVSGDVKLDSKAVELMIRILGRESKYSIALKLLDKIPIDKYSLDVRACTTILHAYS 243

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV--DKALTLMEEF---GV 271
           + G  + A+    RMK+  + P+LV +N +    LD+    G   DK L L++E    G+
Sbjct: 244 RNGKYKQAIAMFERMKDCGLSPSLVTYNVM----LDVYGKMGRSWDKILDLLDEMRNEGL 299

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP----------------------- 308
           + D  T ST++ A    GL+ + +E F ++  +G EP                       
Sbjct: 300 QFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALN 359

Query: 309 ------------DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
                       D   ++ L   YVRAG  ++  +++ +M + GV PN V +TTVI+ + 
Sbjct: 360 ILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYG 419

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE---KGVRP 413
            A K  +A+ ++ +M + G  PN+ TY ++L   G+     R+EE+++++ +    G  P
Sbjct: 420 RAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKS---RSEEMIKILSDMRINGCPP 476

Query: 414 KKST 417
            + T
Sbjct: 477 NRIT 480



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 1/159 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++I         A  + + + E G +P L+TY +L+    R+        ++  + K G 
Sbjct: 660 LSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGE 719

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + +N +I      G + EA+++  +M   G  P   TYNT + GY   G   E  +
Sbjct: 720 SPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDE 779

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVY 159
           ++  M Q KN KPN+ TY I+V  +C     ++A + ++
Sbjct: 780 VISYMIQ-KNCKPNELTYKIIVDGYCKARKYQDAMDFIF 817


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 216/421 (51%), Gaps = 8/421 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L+ +G+     TY TL+  L++  + K+ L L+ ++EK  ++P+ ++++A+I+   + G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V +A+ +  ++ + G      TYN+LI G  +VG+ +E  +LL  M ++ NV P+D T+N
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRE-NVDPDDYTFN 269

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           IL+ A C +  I EA  V+  M   G +PD VTYN L   Y      + A ++   M   
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            + P+     +++ GYCK   +++AM     +    + P +  +NSLI G  +      V
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            K L  M      PDVVT++ ++DA    G + +   +   M+K G++P+I  ++ +  G
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y        A+ I   M K G+ P+++ +  +I+G+C    +  A+ ++++M    + P+
Sbjct: 450 YCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPD 509

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW-------RAIGLAR 432
           + +Y +L+ G     +    +ELL  M + G  P   T  ++ D++       +AI L R
Sbjct: 510 IASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFR 569

Query: 433 E 433
           +
Sbjct: 570 Q 570



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 205/411 (49%), Gaps = 2/411 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G+  EA  +   + + G +P ++TY  L+     ++       L +++ K G+
Sbjct: 272 IDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGL 331

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD + +N +I+   ++  VDEAM +F+++ +    PT ++YN+LI G  N G+     K
Sbjct: 332 EPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKK 391

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M       P+  TYNIL+ A C +  I EA  V+  M+  G++P+ VTYN +   Y
Sbjct: 392 LLDEMHGSAQ-PPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGY 450

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                   A+ +   M  + + P+     ++++GYCK   +++A+     M+   + P++
Sbjct: 451 CLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDI 510

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +NSLI G  ++     V + L  M + G  PDV+T++ ++DA+       K   +F  
Sbjct: 511 ASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQ 570

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +V+ GI PD +    +     +  + + AE  L  +  +G  PNV  +T +I+  C    
Sbjct: 571 IVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGS 629

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
              AM +  KM +    P+  T+E ++    +  +  +AE+L + M  +G+
Sbjct: 630 FGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 126/508 (24%), Positives = 230/508 (45%), Gaps = 36/508 (7%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           +V  G    A  +F  L  +G  P++ T+T L+     Q       SL++ + K G +P+
Sbjct: 65  IVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPN 124

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + FN +IN    +G + +A+   Q +   G      TY TLI G    G+ + +L LLQ
Sbjct: 125 LVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQ 184

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +  +V+PN   Y+ L+   C    + +A  +  ++   GI  DAVTYN+L       
Sbjct: 185 EMEK-SSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSV 243

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G      Q+L +M    V P++ T  I++   CKEG + +A   L  M +    P++V +
Sbjct: 244 GRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTY 303

Query: 244 NSLIKGFLDIKDS--------------------------DG------VDKALTLMEEFGV 271
           N+L++G+   ++                           DG      VD+A+ L +E   
Sbjct: 304 NALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN 363

Query: 272 K---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
           K   P + ++++++D   ++G +   +++ D+M  +   PD+  ++IL     + G   +
Sbjct: 364 KNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILE 423

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  +L  M K GV PN+V +  ++ G+C    +  A  I+ +M + G+ P++  Y  L+ 
Sbjct: 424 ALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLIN 483

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSM 448
           GY + +    A  L + M  K + P  ++   + D    +G     + +L    +  QS 
Sbjct: 484 GYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSP 543

Query: 449 PNKKDEIAVESIHRKQNLSASNSTFLQI 476
                 I +++  + Q    + S F QI
Sbjct: 544 DVITYNILLDAFCKTQPFDKAISLFRQI 571



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 222/470 (47%), Gaps = 21/470 (4%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  E   +   ++ E   P   T+  L+ AL ++ R      +++ + K G KPD + +
Sbjct: 244 GRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTY 303

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           NA++       NV EA ++F +M   G +P    YN LI GY      +E++ L + +  
Sbjct: 304 NALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELC- 362

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +KN+ P   +YN L+   C+   I     ++ +M  S   PD VTYN L  A  + G   
Sbjct: 363 NKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRIL 422

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +L  M    V+PN  T   ++ GYC   N+  A     RM +  + P+++ +N LI
Sbjct: 423 EALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLI 482

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            G+     ++ VD+A+ L +E   K   PD+ ++++++D   + G +   QE+ D+M  +
Sbjct: 483 NGYC---KTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDS 539

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G  PD+  ++IL   + +     KA S+   + + G+ P+      ++   C   K++ A
Sbjct: 540 GQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMA 598

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
               + +   G +PN++TY  L+    +      A  LL  ME+    P   T +++   
Sbjct: 599 EDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEII--- 655

Query: 425 WRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFL 474
              IG+  +     K AE+ R+ M      IA   ++ +++L+ S++ F 
Sbjct: 656 ---IGVLLQRNETDK-AEKLREEM------IARGLVNIEKSLNQSHNVFF 695



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 180/377 (47%), Gaps = 1/377 (0%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P + +F+ ++ A    G+   A+ +F +++  G  P+ +T+  LI  Y +      +  L
Sbjct: 53  PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           L  + +    +PN  T+N ++  +C    I +A +    ++A G   D  TY TL    +
Sbjct: 113 LATILK-SGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLS 171

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           + G+   A  +L EM+ + V+PN      ++ G CK+G + DA+    ++ E  +  + V
Sbjct: 172 KNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            +NSLI G   +     V + LT M    V PD  TF+ ++DA    G + + Q +   M
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
            K G +PDI  ++ L +GY       +A  +   M K G+ P+V+ +  +I G+C    +
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMV 351

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             AM +++++C   + P + +Y +L+ G   + +    ++LL  M      P   T  ++
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNIL 411

Query: 422 ADSWRAIGLAREAKRVL 438
            D+    G   EA  VL
Sbjct: 412 IDALCKEGRILEALGVL 428



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 182/372 (48%), Gaps = 9/372 (2%)

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
           NVD+A+  F +M      P TS ++ L+     +G    ++ L   + Q K + P+  T+
Sbjct: 35  NVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQL-QSKGISPSIATF 93

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
            IL+  +  ++    A++++  ++ SG QP+ VT+NT+   +   G  ++A      +  
Sbjct: 94  TILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
                ++ T G +++G  K G ++ A+  L  M++  V PNLV++++LI G       DG
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLC----KDG 209

Query: 259 -VDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
            V  AL L   + E G+  D VT+++++D   S G   +  ++   MV+  ++PD + F+
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
           IL     + G   +A+ +L  M K G  P++V +  ++ G+C+   +  A  ++ +M + 
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G+ P++  Y  L+ GY + K    A  L + +  K + P  ++   + D     G     
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389

Query: 435 KRVLKSAEEDRQ 446
           K++L       Q
Sbjct: 390 KKLLDEMHGSAQ 401



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 108/258 (41%), Gaps = 35/258 (13%)

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C+  N++DA+    RM  +   P   VF+ L+   + +          T ++  G+ P +
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF---------------------S 314
            TF+ +++ +           +   ++K+G +P++  F                     +
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 315 ILAKGYV--------------RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +LA+GY+              + G+ + A  +L  M K  V PN+VM++ +I G C    
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A+ +  ++ E GI  +  TY +L+ G     +     +LL  M  + V P   T  +
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 421 VADSWRAIGLAREAKRVL 438
           + D+    G   EA+ VL
Sbjct: 271 LIDALCKEGRILEAQGVL 288


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 217/408 (53%), Gaps = 1/408 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  KG+ H+A Y  + ++ +G +   ++Y TL+  L R    K+ + L+ +V+   ++P+
Sbjct: 138 LCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPN 197

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            ++++ +I++  +   V++A  ++ +M      P   TY++LI G+  VGK + ++ L  
Sbjct: 198 VVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFN 257

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D N+ PN  T++IL+  +C +  + EA NV+  M+   ++ D VTYN+L   Y   
Sbjct: 258 RMISD-NINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLV 316

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +  +A+ +   M    V P+  +  I+++G+CK   +++AM+    M   ++ PN+V +
Sbjct: 317 KQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTY 376

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           NSL+ G      +    + +  M + G   +++T+++I+DA      + K   +   + +
Sbjct: 377 NSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKE 436

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GI+PDI  +++L  G  + G    A+ +   +   G  PN+  +T++I+G+CN      
Sbjct: 437 KGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDE 496

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
            +++  KM + G  PN  TYE L+    E  +  +AE+LL+ M  +G+
Sbjct: 497 GLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/442 (25%), Positives = 218/442 (49%), Gaps = 3/442 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +P  IT   L+   ++    K   S+ +K+ K G  PD++ F  +I      G V +A
Sbjct: 88  GIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKA 147

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +    K+   G +    +Y TLI G   VG+ + +++LL+ +   K V+PN   Y+ ++ 
Sbjct: 148 LYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRV-DGKLVRPNVVMYSTIID 206

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C    + +A+++  +MV+  I PD VTY++L   +   G+   A  +   M ++ + P
Sbjct: 207 SMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINP 266

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  T  I++ G+CKEG + +A   L  M +  V  ++V +NSL+ G+  +K  +      
Sbjct: 267 NVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLF 326

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            +M + GV PDV ++S +++ +    ++ +  ++F++M    I P++  ++ L  G  ++
Sbjct: 327 NVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKS 386

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G    A  ++  M   G   N++ + +++   C    + +A+ +  K+ E GI P++ TY
Sbjct: 387 GRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTY 446

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             L+ G  +  +   A+++ + +  KG  P   T   + + +   G   E   +L S  +
Sbjct: 447 TVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAML-SKMK 505

Query: 444 DRQSMPNKKD-EIAVESIHRKQ 464
           D   +PN    EI + S+  K 
Sbjct: 506 DNGCIPNAITYEILIHSLFEKD 527



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 149/299 (49%), Gaps = 1/299 (0%)

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           + A ++  +M  +GI+PD +T N L   ++Q G    +  +  ++      P+  T  I+
Sbjct: 75  QTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTIL 134

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           + G C +G +  A+ F  ++       + V + +LI G   + ++    + L  ++   V
Sbjct: 135 IKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLV 194

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           +P+VV +STI+D+     L+    +++ +MV   I PD+  +S L  G+   G+ + A  
Sbjct: 195 RPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVD 254

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +   M    ++PNV  F+ +I G+C   K++ A ++   M +  +  ++ TY +L+ GY 
Sbjct: 255 LFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYC 314

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
             KQ  +A+ L  VM ++GV P   +  ++ + +  I +  EA ++ +     +Q  PN
Sbjct: 315 LVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHC-KQIFPN 372



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 53/94 (56%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  +A  +F  L+ +G+ P + TYT+L+     +  F   L+++SK++ +G 
Sbjct: 450 INGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGC 509

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
            P++I +  +I++  E    D+A K+ ++M   G
Sbjct: 510 IPNAITYEILIHSLFEKDENDKAEKLLREMIARG 543


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 207/417 (49%), Gaps = 1/417 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  +A   F+     G +PT+ TYTT++  L +     +   L  K+E+ G 
Sbjct: 172 INGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGC 231

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ + +N +I++  +   V+EA+ IF  MK     P   TYN+LI+G  N  + +E+  
Sbjct: 232 QPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASA 291

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M+   N+ PN  T+N+LV A C +  + EA  V   M   G++PD VTY++L   Y
Sbjct: 292 LLNEMTS-LNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGY 350

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           +   E   A ++   M     +P+  +  I++ GYCK   +++A +    M    + P+ 
Sbjct: 351 SLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDN 410

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+LI G   +            M   G  PD+ T+S ++D +   G +GK   +F  
Sbjct: 411 VNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRV 470

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M    ++PDI +++IL     + G  + A  + + +   G+ PNV ++TT+I+  C    
Sbjct: 471 MQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGL 530

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           +  A+  +  M   G  P+  +Y  ++ G+ + K   RA +L+  M ++G   +  T
Sbjct: 531 LDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGT 587



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 203/415 (48%), Gaps = 36/415 (8%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P + T + L+   +  +R     S+ SK+ K G++PD++ FN +IN   + G   +A
Sbjct: 125 GLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQA 184

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           ++ F   + SGC+PT  TY T+I G   +G+   +  L + M ++   +PN  TYNIL+ 
Sbjct: 185 VEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKM-EEAGCQPNVVTYNILID 243

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C    + EA ++   M A  I PD  TYN+L +    +     A  +L EM +  + P
Sbjct: 244 SLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMP 303

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  T  ++V   CKEG + +A      M E+ V P++V ++SL+ G              
Sbjct: 304 NIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYG-------------- 349

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
                + ++ ++V                + +++FD M+  G +PD   ++IL KGY +A
Sbjct: 350 -----YSLRMEIV----------------EARKLFDAMITKGCKPDAFSYNILIKGYCKA 388

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
               +A+ +   M   G+ P+ V + T+I G C   +++ A  +++ M   G  P+L TY
Sbjct: 389 KRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTY 448

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             LL G+ +     +A  L +VM+   ++P  +   ++ D+    G  ++A+++ 
Sbjct: 449 SMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLF 503



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/424 (24%), Positives = 186/424 (43%), Gaps = 37/424 (8%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQ-KRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           FN ++     P +I +T L++A+ +  + + +++SL  ++E  G+ PD    + +I+  S
Sbjct: 82  FNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFS 141

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
               VD A  +F KM   G                                    ++P+ 
Sbjct: 142 HLQRVDLAFSVFSKMIKLG------------------------------------LQPDA 165

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            T+N L+   C      +A        ASG QP   TY T+     + GET  A  +  +
Sbjct: 166 VTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKK 225

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M+    +PN  T  I++   CK+  + +A+     MK   + P++  +NSLI+G  + + 
Sbjct: 226 MEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRR 285

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
                  L  M    + P++ TF+ ++DA    G + + Q +F  M + G+EPD+  +S 
Sbjct: 286 WKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSS 345

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  GY    E  +A  +  +M   G  P+   +  +I G+C A ++  A  ++ +M   G
Sbjct: 346 LMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQG 405

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           + P+   Y TL+ G  +  +   A++L + M   G  P   T  ++ D +   G   +A 
Sbjct: 406 LTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAF 465

Query: 436 RVLK 439
           R+ +
Sbjct: 466 RLFR 469


>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
 gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
          Length = 821

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 221/449 (49%), Gaps = 6/449 (1%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           V  G   E   + + + E G +P  +TYTT++ A  R  +    LSL  ++++ G  P+ 
Sbjct: 361 VRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNV 420

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
             +NA++    +    +E MKI   MK  GC P   T+NT++   GN G  +   ++ Q 
Sbjct: 421 CTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQE 480

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M +    +P+  T+N L+ A     S  +A  +  +M+ +G  P   TYN L  A A+ G
Sbjct: 481 M-KSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRG 539

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +   AE ++ +M+N   +P+E +  +I++ Y K G ++   R    + +  + P+ ++  
Sbjct: 540 DWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLR 599

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +LI      +   G+++A   +++ G KPD+V F++++  +S   +  +  EI   + + 
Sbjct: 600 TLILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQEC 659

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G++PD+  ++ L   Y R GE  KAE IL  ++  G   +++ + TVI G+C    M  A
Sbjct: 660 GLQPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEA 719

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           +    +M   GI P + TY T + GY         +E+L  M +   RP + T ++V D 
Sbjct: 720 LRTLSEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDG 779

Query: 425 WRAIGLAREAKRVLKSAEE-----DRQSM 448
           +      +EA   + +  +     D QSM
Sbjct: 780 YCKAKKFKEAMDFVSTITDIDDSFDYQSM 808



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/387 (24%), Positives = 165/387 (42%), Gaps = 37/387 (9%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDGMKPDSIL 66
           GK   A  IF  + E G  PTL+TY  ++    +  R +  IL L+ ++   G+  D   
Sbjct: 223 GKYERAVAIFEKMNESGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFT 282

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            + +I+AC   G +DEA + F  +K  G  P T TY                        
Sbjct: 283 CSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTY------------------------ 318

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
                       N L++ +       EA +++ +M  +   PDAVTYN L  AY + G  
Sbjct: 319 ------------NALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFY 366

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
                ++  M  N ++PN  T   +++ Y +   ++ A+    +MKE    PN+  +N++
Sbjct: 367 EEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAI 426

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +        S+ + K L  M+  G  P+ +T++T++    + G+    + +F +M   G 
Sbjct: 427 LGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGF 486

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           EPD   F+ L     R G    AE I   M + G  P+V  +  +++        + A S
Sbjct: 487 EPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAES 546

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEA 393
           + + M   G  P+  +Y  +L  Y + 
Sbjct: 547 VIKDMKNKGFKPSETSYSLILNSYAKG 573



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 84/375 (22%), Positives = 181/375 (48%), Gaps = 3/375 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L  K +  E   I   +  +G  P  IT+ T+++    +   K +  +  +++  G 
Sbjct: 427 LGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGF 486

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD   FN +I A    G+  +A KI+ +M ++G  P+ +TYN L+      G    +  
Sbjct: 487 EPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAES 546

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG-IQPDAVTYNTLARA 179
           +++ M ++K  KP++ +Y++++ ++ +K    +  N + K +  G I P  +   TL  A
Sbjct: 547 VIKDM-KNKGFKPSETSYSLILNSY-AKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILA 604

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             +       E+    +Q +  +P+      ++S + ++   + A   ++ ++E  + P+
Sbjct: 605 NFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPD 664

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           LV +NSL+  +    +    ++ L  ++  G K D+++++T++  +   GLM +      
Sbjct: 665 LVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLS 724

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M+  GI P I  ++    GY   G   + + +L+ M K+   PN + +  V+ G+C A 
Sbjct: 725 EMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAK 784

Query: 360 KMQRAMSIYEKMCEI 374
           K + AM     + +I
Sbjct: 785 KFKEAMDFVSTITDI 799



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/423 (21%), Positives = 185/423 (43%), Gaps = 65/423 (15%)

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL------ 122
            ++ A   SG+ + A+ +F+ +              L  G GNV    ++++L+      
Sbjct: 140 GVLKALDLSGDCERAILLFEWL-------------VLNLGTGNVNLDNQAVELMARILGR 186

Query: 123 ----QLMSQDKNVKPND------RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT 172
                + S+  +V P D      R Y  ++ ++      E A  +  KM  SG+ P  VT
Sbjct: 187 ESQHSIASKLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVT 246

Query: 173 YNTLARAYAQYGETY-RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
           YN +   Y + G ++ +   +L EM++  +  +E TC  ++S   +EG +++A  F   +
Sbjct: 247 YNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGL 306

Query: 232 KELEVHPNLVVFNSLIKGF-------------LDIKDSDGVDKALTL------------- 265
           K     P  V +N+L++ F              +++D++    A+T              
Sbjct: 307 KSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFY 366

Query: 266 ---------MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
                    M E G+KP+ VT++T+++A+  A  + K   ++D M ++G  P++  ++ +
Sbjct: 367 EEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAI 426

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
                +  + ++   IL  M+  G  PN + + T++S   N    +    ++++M   G 
Sbjct: 427 LGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGF 486

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            P+  T+ TL+   G       AE++   M E G  P  +T   + ++    G  R A+ 
Sbjct: 487 EPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAES 546

Query: 437 VLK 439
           V+K
Sbjct: 547 VIK 549


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 215/438 (49%), Gaps = 7/438 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA ++F+ +I EG +P ++TY TL+  L +     + + L+  +E+   +P+
Sbjct: 150 LCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPN 209

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            ++F+ +I++  +   V EA  IF +M   G  P   TYN+LI G   + + +    L+ 
Sbjct: 210 VVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMN 269

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D  + P+  T N +V A C +  + EA +VV  M+  G++P+ VTYN L   +   
Sbjct: 270 EMV-DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLR 328

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E   A ++   M +     N  +   +++GYCK  +++ AM     M   E+ PN V +
Sbjct: 329 NEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTY 388

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N+LI G   +     +  A++L  E    G  PD+VT+ T+ D       + K   +   
Sbjct: 389 NTLIHGLCHVGR---LQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 445

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +  +  +PDI +++ +  G  RAGE + A  + +++   G+ PNV  +  +I G C    
Sbjct: 446 IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 505

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ +M + G +PN  TY  +  G+    +  R  ELL+ M  +G     ST  L
Sbjct: 506 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTL 565

Query: 421 VADSWRAIGLAREAKRVL 438
           +       GL +  K++L
Sbjct: 566 LVGMLSDDGLDQSVKQIL 583



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 208/455 (45%), Gaps = 39/455 (8%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P + T   ++ +L    R     S ++K+ K G +PD+  F  +I      G + EA
Sbjct: 100 GIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEA 159

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +F KM   G +P   TY TLI G   VG    +++LL+ M Q  N +PN   ++ L+ 
Sbjct: 160 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ-GNCQPNVVVFSTLID 218

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C    + EA+N+  +M+  GI P+ VTYN+L     +  E      ++ EM ++++ P
Sbjct: 219 SLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMP 278

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF-----LDI----- 253
           +  T   +V   CKEG + +A   +  M    V PN+V +N+L+ G      +D+     
Sbjct: 279 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF 338

Query: 254 -----KDS-----------------DGVDKALTLMEEFG---VKPDVVTFSTIMDAWSSA 288
                KD                    VDKA+ L EE     + P+ VT++T++      
Sbjct: 339 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV 398

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
           G +     +F +MV  G  PD+  +  L+    +     KA ++L ++      P++ ++
Sbjct: 399 GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIY 458

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           TT++ G C A +++ A  ++  +   G+ PN+ TY  ++ G  +      A +L   M +
Sbjct: 459 TTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK 518

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            G  P   T  L+    R      EA R ++  EE
Sbjct: 519 NGCSPNDCTYNLIT---RGFLRNNEALRTIELLEE 550



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/431 (24%), Positives = 189/431 (43%), Gaps = 36/431 (8%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA   FN ++ +   P+ + +  L+ ++ + K   ++LSL  +++  G+ PD      +I
Sbjct: 53  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 112

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N+      VD A     K+   G +P  +T+ T                           
Sbjct: 113 NSLCHLNRVDFAFSALAKILKLGHQPDATTFTT--------------------------- 145

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
                    L+R  C +  I EA ++  KM+  G QP+ VTY TL     + G T  A +
Sbjct: 146 ---------LIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIR 196

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L  M+    +PN      ++   CK+  + +A      M    + PN+V +NSLI G  
Sbjct: 197 LLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLC 256

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
            + +   V   +  M +  + PDV T +T++DA    G++ +  ++ D M+  G+EP++ 
Sbjct: 257 KLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVV 316

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++ L  G+    E   A  +  +M       NV+ + T+I+G+C    + +AM ++E+M
Sbjct: 317 TYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEM 376

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
               + PN  TY TL+ G     +   A  L   M  +G  P   T + ++D        
Sbjct: 377 SRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHL 436

Query: 432 REAKRVLKSAE 442
            +A  +LK+ E
Sbjct: 437 DKAMALLKAIE 447



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 146/302 (48%), Gaps = 9/302 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLV-AALTRQKRFKSILSLISKVEKDG 59
           ++ L  +G   EAH + + +I  G  P ++TY  L+     R +   ++    + V KD 
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 346

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +  + I +N +IN   +  +VD+AM +F++M      P T TYNTLI G  +VG+ ++++
Sbjct: 347 VA-NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            L   M     + P+  TY  L    C    +++A  ++  +  S   PD   Y T+   
Sbjct: 406 SLFHEMVARGQI-PDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDG 464

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + GE   A  +   + +  ++PN  T  I++ G CK+G + +A +    M +    PN
Sbjct: 465 MCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPN 524

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
              +N + +GFL  ++++ + + + L+EE    G   DV T + ++   S  GL    ++
Sbjct: 525 DCTYNLITRGFL--RNNEAL-RTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQ 581

Query: 297 IF 298
           I 
Sbjct: 582 IL 583



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 125/290 (43%), Gaps = 35/290 (12%)

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
           N+++EA +   +M+     P  V +N L  + A+         +  +M +  + P+  T 
Sbjct: 49  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
            I+++  C                    H N V F      F           AL  + +
Sbjct: 109 AIVINSLC--------------------HLNRVDF-----AF----------SALAKILK 133

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G +PD  TF+T++      G +G+   +FD M+  G +P++  +  L  G  + G    
Sbjct: 134 LGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSA 193

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  +L SM +    PNVV+F+T+I   C   ++  A +I+ +M   GI+PN+ TY +L+ 
Sbjct: 194 AIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIH 253

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           G  +  +      L+  M +  + P   T+  V D+    G+  EA  V+
Sbjct: 254 GLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVV 303



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 12/175 (6%)

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
           F  KP  + F+T+ +A S+          F+ M+     P    F+ L     +      
Sbjct: 41  FHSKP--LHFNTLDEALST----------FNRMLHKQPPPSTVDFNRLLTSIAKTKHHST 88

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
             S+   M  +G+ P+V     VI+  C+  ++  A S   K+ ++G  P+  T+ TL+ 
Sbjct: 89  LLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIR 148

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           G     +   A  L   M  +G +P   T   + +    +G    A R+L+S E+
Sbjct: 149 GLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ 203


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 216/421 (51%), Gaps = 8/421 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L+ +G+     TY TL+  L++  + K+ L L+ ++EK  ++P+ ++++A+I+   + G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V +A+ +  ++ + G      TYN+LI G  +VG+ +E  +LL  M ++ NV P+D T+N
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRE-NVDPDDYTFN 269

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           IL+ A C +  I EA  V+  M   G +PD VTYN L   Y      + A ++   M   
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            + P+     +++ GYCK   +++AM     +    + P +  +NSLI G  +      V
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            K L  M      PDVVT++ ++DA    G + +   +   M+K G++P+I  ++ +  G
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y        A+ I   M K G+ P+++ +  +I+G+C    +  A+ ++++M    + P+
Sbjct: 450 YCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPD 509

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW-------RAIGLAR 432
           + +Y +L+ G     +    +ELL  M + G  P   T  ++ D++       +AI L R
Sbjct: 510 IASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFR 569

Query: 433 E 433
           +
Sbjct: 570 Q 570



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 205/411 (49%), Gaps = 2/411 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G+  EA  +   + + G +P ++TY  L+     ++       L +++ K G+
Sbjct: 272 IDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGL 331

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD + +N +I+   ++  VDEAM +F+++ +    PT ++YN+LI G  N G+     K
Sbjct: 332 EPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKK 391

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M       P+  TYNIL+ A C +  I EA  V+  M+  G++P+ VTYN +   Y
Sbjct: 392 LLDEMHGSAQ-PPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGY 450

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                   A+ +   M  + + P+     ++++GYCK   +++A+     M+   + P++
Sbjct: 451 CLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDI 510

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +NSLI G  ++     V + L  M + G  PDV+T++ ++DA+       K   +F  
Sbjct: 511 ASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQ 570

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +V+ GI PD +    +     +  + + AE  L  +  +G  PNV  +T +I+  C    
Sbjct: 571 IVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGS 629

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
              AM +  KM +    P+  T+E ++    +  +  +AE+L + M  +G+
Sbjct: 630 FGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 126/508 (24%), Positives = 230/508 (45%), Gaps = 36/508 (7%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           +V  G    A  +F  L  +G  P++ T+T L+     Q       SL++ + K G +P+
Sbjct: 65  IVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPN 124

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + FN +IN    +G + +A+   Q +   G      TY TLI G    G+ + +L LLQ
Sbjct: 125 LVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQ 184

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +  +V+PN   Y+ L+   C    + +A  +  ++   GI  DAVTYN+L       
Sbjct: 185 EMEK-SSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSV 243

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G      Q+L +M    V P++ T  I++   CKEG + +A   L  M +    P++V +
Sbjct: 244 GRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTY 303

Query: 244 NSLIKGFLDIKDS--------------------------DG------VDKALTLMEEFGV 271
           N+L++G+   ++                           DG      VD+A+ L +E   
Sbjct: 304 NALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN 363

Query: 272 K---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
           K   P + ++++++D   ++G +   +++ D+M  +   PD+  ++IL     + G   +
Sbjct: 364 KNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILE 423

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  +L  M K GV PN+V +  ++ G+C    +  A  I+ +M + G+ P++  Y  L+ 
Sbjct: 424 ALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLIN 483

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSM 448
           GY + +    A  L + M  K + P  ++   + D    +G     + +L    +  QS 
Sbjct: 484 GYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSP 543

Query: 449 PNKKDEIAVESIHRKQNLSASNSTFLQI 476
                 I +++  + Q    + S F QI
Sbjct: 544 DVITYNILLDAFCKTQPFDKAISLFRQI 571



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 198/417 (47%), Gaps = 8/417 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  E   +   ++ E   P   T+  L+ AL ++ R      +++ + K G KPD + +
Sbjct: 244 GRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTY 303

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           NA++       NV EA ++F +M   G +P    YN LI GY      +E++ L + +  
Sbjct: 304 NALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELC- 362

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +KN+ P   +YN L+   C+   I     ++ +M  S   PD VTYN L  A  + G   
Sbjct: 363 NKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRIL 422

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +L  M    V+PN  T   ++ GYC   N+  A     RM +  + P+++ +N LI
Sbjct: 423 EALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLI 482

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            G+     ++ VD+A+ L +E   K   PD+ ++++++D   + G +   QE+ D+M  +
Sbjct: 483 NGYC---KTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDS 539

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G  PD+  ++IL   + +     KA S+   + + G+ P+      ++   C   K++ A
Sbjct: 540 GQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMA 598

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
               + +   G +PN++TY  L+    +      A  LL  ME+    P   T +++
Sbjct: 599 EDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEII 655



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 180/377 (47%), Gaps = 1/377 (0%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P + +F+ ++ A    G+   A+ +F +++  G  P+ +T+  LI  Y +      +  L
Sbjct: 53  PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           L  + +    +PN  T+N ++  +C    I +A +    ++A G   D  TY TL    +
Sbjct: 113 LATILK-SGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLS 171

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           + G+   A  +L EM+ + V+PN      ++ G CK+G + DA+    ++ E  +  + V
Sbjct: 172 KNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            +NSLI G   +     V + LT M    V PD  TF+ ++DA    G + + Q +   M
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
            K G +PDI  ++ L +GY       +A  +   M K G+ P+V+ +  +I G+C    +
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMV 351

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             AM +++++C   + P + +Y +L+ G   + +    ++LL  M      P   T  ++
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNIL 411

Query: 422 ADSWRAIGLAREAKRVL 438
            D+    G   EA  VL
Sbjct: 412 IDALCKEGRILEALGVL 428



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 182/372 (48%), Gaps = 9/372 (2%)

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
           NVD+A+  F +M      P TS ++ L+     +G    ++ L   + Q K + P+  T+
Sbjct: 35  NVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQL-QSKGISPSIATF 93

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
            IL+  +  ++    A++++  ++ SG QP+ VT+NT+   +   G  ++A      +  
Sbjct: 94  TILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
                ++ T G +++G  K G ++ A+  L  M++  V PNLV++++LI G       DG
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLC----KDG 209

Query: 259 -VDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
            V  AL L   + E G+  D VT+++++D   S G   +  ++   MV+  ++PD + F+
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
           IL     + G   +A+ +L  M K G  P++V +  ++ G+C+   +  A  ++ +M + 
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G+ P++  Y  L+ GY + K    A  L + +  K + P  ++   + D     G     
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389

Query: 435 KRVLKSAEEDRQ 446
           K++L       Q
Sbjct: 390 KKLLDEMHGSAQ 401



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 108/258 (41%), Gaps = 35/258 (13%)

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C+  N++DA+    RM  +   P   VF+ L+   + +          T ++  G+ P +
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF---------------------S 314
            TF+ +++ +           +   ++K+G +P++  F                     +
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 315 ILAKGYV--------------RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +LA+GY+              + G+ + A  +L  M K  V PN+VM++ +I G C    
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A+ +  ++ E GI  +  TY +L+ G     +     +LL  M  + V P   T  +
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 421 VADSWRAIGLAREAKRVL 438
           + D+    G   EA+ VL
Sbjct: 271 LIDALCKEGRILEAQGVL 288


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 153/581 (26%), Positives = 264/581 (45%), Gaps = 51/581 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +NIL  KGK  EA  I + + +    P + TYT+L+    R +       +  ++ K+G 
Sbjct: 247 INILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGC 306

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+S+ ++ +IN     G VDEA+ + ++M + G +PT  TY   I     +   EE+++
Sbjct: 307 DPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIE 366

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L+  M + +  +PN +TY  L+        +E A  + +KM+  G+ P+ VTYN L    
Sbjct: 367 LVARMKK-RGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINEL 425

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A ++   M+ +    N +T   I+ G C  G++E AM    +M ++   P +
Sbjct: 426 CVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTV 485

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+LI G+L   + +   + L LM+E G +PD  T++ ++  +S  G +      F +
Sbjct: 486 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 545

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQ--------------------------------- 327
           MV+ G+ P+   ++ L  G+ + G+                                   
Sbjct: 546 MVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENR 605

Query: 328 --KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +AE I   M + G+ PNV+ +TT+I G C   + Q A  I+  M +    PNL TY +
Sbjct: 606 FSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSS 665

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
           L++G  +  +   AE LL+ ME KG+ P + T   + D +  +G    A  +L+    D 
Sbjct: 666 LIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM-VDV 724

Query: 446 QSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVS-SEHNGSSAAKIRSQIVLRSDTVW 504
              PN +    +    +K+ L       +Q   V S S H      +I S ++ R   + 
Sbjct: 725 GCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIG 784

Query: 505 TATKSLFVNTYGSGVQPMVVCRKQCSQVGTCGQFVNAYRLV 545
                  ++TY + V  +  CRK        G+F  A +LV
Sbjct: 785 CEPT---LDTYSTLVSGL--CRK--------GRFYEAEQLV 812



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 199/437 (45%), Gaps = 21/437 (4%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK   A + F  ++E G  P  ++YTTL+   ++  +    LSL+ ++E+ G  P+   +
Sbjct: 534 GKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESY 593

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           NA+IN  S+     EA KI  KM + G  P   TY TLI G    G+ + + K+   M +
Sbjct: 594 NAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEK 653

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K + PN  TY+ L+   C +   +EA  ++ +M   G+ PD VT+ +L   +   G   
Sbjct: 654 RKCL-PNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRID 712

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +L  M +   +PN RT  +++ G  KE         L   K    H  +  F+   
Sbjct: 713 HAFLLLRRMVDVGCKPNYRTYSVLLKGLQKEC-------LLLEEKVAVQHEAVYSFSPHE 765

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           K   D+ + + V   L  M E G +P + T+ST++      G   + +++  DM + G  
Sbjct: 766 K---DV-NFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFC 821

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD  ++  L   + +  E   A  I  S+   G   ++ ++  +I   C A +++ A ++
Sbjct: 822 PDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQAL 881

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           ++ M E   N +   +  L+ G  +  +     +LL +ME K   P   T          
Sbjct: 882 FDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY--------- 932

Query: 428 IGLAREAKRVLKSAEED 444
           + L RE  R+ KS E +
Sbjct: 933 VILGRELSRIGKSIESE 949



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/487 (23%), Positives = 213/487 (43%), Gaps = 74/487 (15%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           ++ A   ++  + +   ++++   G        N ++   ++   V+ A  ++++M +SG
Sbjct: 176 MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG 235

Query: 95  CKPTTSTYNTLIKGYGNVGKPEES-LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
            +P+  T+NTLI      GK  E+ L L Q+   D  + P+  TY  L+   C   +++ 
Sbjct: 236 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYD--LSPDVFTYTSLILGHCRNRNLDL 293

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE------------------ 195
           A+ V  +MV  G  P++VTY+TL       G    A  ML E                  
Sbjct: 294 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPIT 353

Query: 196 -----------------MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
                            M+    RPN +T   ++SG  + G +E A+   ++M +  + P
Sbjct: 354 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP 413

Query: 239 NLVVFNSLIK----------------------GFLDIKDSDGVDKALTL----------- 265
           N V +N+LI                          + +  + + K L L           
Sbjct: 414 NTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLF 473

Query: 266 --MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M + G  P VVT++T+++ + + G +     + D M + G EPD   ++ L  G+ + 
Sbjct: 474 EKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKW 533

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+ + A      M + G++PN V +TT+I G     K+  A+S+ E+M E+G NPN+++Y
Sbjct: 534 GKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESY 593

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             ++ G  +  +   AE++   M E+G+ P   T   + D     G  + A ++    E+
Sbjct: 594 NAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEK 653

Query: 444 DRQSMPN 450
            R+ +PN
Sbjct: 654 -RKCLPN 659



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/334 (21%), Positives = 148/334 (44%), Gaps = 12/334 (3%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+   A  IF+ + +    P L TY++L+  L ++ +      L+ ++E+ G+ PD
Sbjct: 635 LCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPD 694

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + F ++I+     G +D A  + ++M D GCKP   TY+ L+KG          L+   
Sbjct: 695 EVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKG----------LQKEC 744

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           L+ ++K    ++  Y+          + E   N++ +M   G +P   TY+TL     + 
Sbjct: 745 LLLEEKVAVQHEAVYSFSPHE--KDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRK 802

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G  Y AEQ++ +M+     P+      ++  +CK   ++ A++  + ++      +L ++
Sbjct: 803 GRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIY 862

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            +LI         +        M E     D + ++ ++D     G +  C ++   M  
Sbjct: 863 RALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMES 922

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
               P+I  + IL +   R G+  ++E +   ++
Sbjct: 923 KNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 956


>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
 gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
 gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 124/489 (25%), Positives = 231/489 (47%), Gaps = 34/489 (6%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +P EA  + N ++  G  P+++TY +L++A  R       + L +++ + G KPD   + 
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK-------- 120
            +++    +G V+ AM IF++M+++GCKP   T+N  IK YGN GK  E +K        
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC 448

Query: 121 -----------LLQLMSQD----------KNVK-----PNDRTYNILVRAWCSKNSIEEA 154
                      LL +  Q+          K +K     P   T+N L+ A+    S E+A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
             V  +M+ +G+ PD  TYNT+  A A+ G   ++E++L EM++ + +PNE T   ++  
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           Y     +         +    + P  V+  +L+            ++A + ++E G  PD
Sbjct: 569 YANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPD 628

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           + T ++++  +    ++ K   + D M + G  P +  ++ L   + R+ +  K+E IL 
Sbjct: 629 ITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILR 688

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            +   G+ P+++ + TVI  +C   +M+ A  I+ +M   GI P++ TY T +  Y    
Sbjct: 689 EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADS 748

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDE 454
               A  +++ M + G RP ++T   + D +  +    EAK  ++         P  +D 
Sbjct: 749 MFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKGEDL 808

Query: 455 IAVESIHRK 463
             +E I +K
Sbjct: 809 RLLERIVKK 817



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 203/387 (52%), Gaps = 8/387 (2%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           +++ L ++ R  S  ++ + +++DG   D   + ++I+A + SG   EA+ +F+KM++ G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI-EE 153
           CKPT  TYN ++  +G +G P   +  L    +   + P+  TYN L+   C + S+ +E
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSLHQE 297

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A  V  +M A+G   D VTYN L   Y +      A ++L EM  N   P+  T   ++S
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---G 270
            Y ++G +++AM    +M E    P++  + +L+ GF   + +  V+ A+++ EE    G
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF---ERAGKVESAMSIFEEMRNAG 414

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
            KP++ TF+  +  + + G   +  +IFD++   G+ PDI  ++ L   + + G   +  
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +   M++ G  P    F T+IS +      ++AM++Y +M + G+ P+L TY T+L   
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAAL 534

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKST 417
                  ++E++L  ME+   +P + T
Sbjct: 535 ARGGMWEQSEKVLAEMEDGRCKPNELT 561



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 229/472 (48%), Gaps = 4/472 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L  +G+   A  +FN L E+G    + +YT+L++A     R++  +++  K+E+DG 
Sbjct: 180 ISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGC 239

Query: 61  KPDSILFNAMINACSESGNV-DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           KP  I +N ++N   + G   ++   + +KMK  G  P   TYNTLI         +E+ 
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAA 299

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           ++ + M +      +  TYN L+  +   +  +EA  V+ +MV +G  P  VTYN+L  A
Sbjct: 300 QVFEEM-KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           YA+ G    A ++  +M     +P+  T   ++SG+ + G +E AM     M+     PN
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +  FN+ IK + +      + K    +   G+ PD+VT++T++  +   G+  +   +F 
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M +AG  P+   F+ L   Y R G  ++A ++   M   GV P++  + TV++      
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
             +++  +  +M +    PN  TY +LL  Y   K+      L + +    + P+   ++
Sbjct: 539 MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLK 598

Query: 420 LVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIH-RKQNLSASN 470
            +        L  EA+R     +E R   P+     ++ SI+ R+Q ++ +N
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKE-RGFSPDITTLNSMVSIYGRRQMVAKAN 649



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 102/433 (23%), Positives = 211/433 (48%), Gaps = 2/433 (0%)

Query: 7   KGKPH-EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
           +G  H EA  +F  +   G     +TY  L+    +  R K  + +++++  +G  P  +
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            +N++I+A +  G +DEAM++  +M + G KP   TY TL+ G+   GK E ++ + + M
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
            ++   KPN  T+N  ++ + ++    E   +  ++   G+ PD VT+NTL   + Q G 
Sbjct: 411 -RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM 469

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
                 +  EM+     P   T   ++S Y + G+ E AM    RM +  V P+L  +N+
Sbjct: 470 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 529

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           ++         +  +K L  ME+   KP+ +T+ +++ A+++   +G    + +++    
Sbjct: 530 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 589

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           IEP   +   L     +     +AE   + +++ G  P++    +++S +     + +A 
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKAN 649

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            + + M E G  P++ TY +L++ +  +    ++EE+L+ +  KG++P   +   V  ++
Sbjct: 650 GVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAY 709

Query: 426 RAIGLAREAKRVL 438
                 R+A R+ 
Sbjct: 710 CRNTRMRDASRIF 722



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/406 (23%), Positives = 180/406 (44%), Gaps = 58/406 (14%)

Query: 39  LTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPT 98
             +QK ++S+L             D+ +   +I+   + G V  A  +F  +++ G    
Sbjct: 161 FMKQKDYQSML-------------DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLD 207

Query: 99  TSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWN-- 156
             +Y +LI  + N G+  E++ + + M +D   KP   TYN+++  +     +   WN  
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEED-GCKPTLITYNVILNVF---GKMGTPWNKI 263

Query: 157 --VVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
             +V KM + GI PDA TYNTL                              TC      
Sbjct: 264 TSLVEKMKSDGIAPDAYTYNTLI-----------------------------TC------ 288

Query: 215 YCKEGNM-EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
            CK G++ ++A +    MK      + V +N+L+  +          K L  M   G  P
Sbjct: 289 -CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSP 347

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
            +VT+++++ A++  G++ +  E+ + M + G +PD+  ++ L  G+ RAG+ + A SI 
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIF 407

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             MR  G  PN+  F   I  + N  K    M I++++   G++P++ T+ TLL  +G+ 
Sbjct: 408 EEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQN 467

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
                   + + M+  G  P++ T   +  ++   G   +A  V +
Sbjct: 468 GMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 199/392 (50%), Gaps = 1/392 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           + T+ T+  ++  L ++ + K     I  +E  G+KP+ + +N +I+     G V+ A  
Sbjct: 233 KSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARM 292

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +   MK+ G +P + TY +LI G    GK EE+  +L+ M ++  + P   TYN L+  +
Sbjct: 293 VLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKM-KEIGLLPTAVTYNTLIDGY 351

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C+K  + +A+    +MV   I P   TYN L  A    G+   A+ M+ +M ++ + P+ 
Sbjct: 352 CNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDS 411

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T  I+++GYC+ GN + A      M    + P LV + SLI            D     
Sbjct: 412 ITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEK 471

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           +   G  PD++ F+ ++D   + G + +   +  +M K  I PD   ++ L +G  R G+
Sbjct: 472 IIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGK 531

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            ++A  +L  M++ G+ P+ + + T+ISG+     +  A +I ++M  IG NP L TY  
Sbjct: 532 VEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNA 591

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           L+ G  + +Q   AEELL+ M  KG+ P  ST
Sbjct: 592 LIQGLCKNQQGDLAEELLKEMVSKGITPDDST 623



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 202/404 (50%), Gaps = 7/404 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+L  +GK  +A      +   G +P ++TY T++     + R +    ++  ++  G+
Sbjct: 243 INVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGV 302

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PDS  + ++I+   + G ++EA  I +KMK+ G  PT  TYNTLI GY N G   ++  
Sbjct: 303 EPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFG 362

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M + + + P   TYN+L+ A   +  ++EA  ++  M  SGI PD++TYN L   Y
Sbjct: 363 YRDEMVR-RAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGY 421

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G   +A  +  EM +  ++P   T   ++    K   M+ A     ++      P+L
Sbjct: 422 CRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDL 481

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           ++FN+LI G      +  +D+A  L++E     + PD VT++T+M      G + + +E+
Sbjct: 482 IMFNALIDGHC---ANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEAREL 538

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
             +M + GI PD   ++ L  GY + G+   A +I   M   G +P ++ +  +I G C 
Sbjct: 539 LKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCK 598

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
             +   A  + ++M   GI P+  TY +L+ G G+      A +
Sbjct: 599 NQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEASD 642



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 192/379 (50%), Gaps = 7/379 (1%)

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           SI+F+ +I AC E    D+A + F  MK+ G  P   T+N ++  +  + + E    L  
Sbjct: 166 SIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYA 225

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + K +K    T+NI++   C +  +++A + +  M   G++P+ VTYNT+   Y   
Sbjct: 226 EMFRLK-IKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSR 284

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A  +L  M+N  V P+  T G ++SG CK G +E+A   L +MKE+ + P  V +
Sbjct: 285 GRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTY 344

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N+LI G+ +  D   + KA    +E     + P V T++ ++ A    G M +   +  D
Sbjct: 345 NTLIDGYCNKGD---LVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKD 401

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M  +GI PD   ++IL  GY R G  +KA ++   M   G+ P +V +T++I       +
Sbjct: 402 MGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNR 461

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ A  ++EK+   G +P+L  +  L+ G+       RA  LL+ M+++ + P + T   
Sbjct: 462 MKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNT 521

Query: 421 VADSWRAIGLAREAKRVLK 439
           +       G   EA+ +LK
Sbjct: 522 LMQGRCREGKVEEARELLK 540



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 182/384 (47%), Gaps = 1/384 (0%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           I +  L+ A    KR          +++ G+ P    FNAM++   +    +    ++ +
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M     K T  T+N +I      GK +++   +  M ++  VKPN  TYN ++  +CS+ 
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSM-ENLGVKPNVVTYNTVIHGYCSRG 285

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            +E A  V+  M   G++PD+ TY +L     + G+   A  +L +M+   + P   T  
Sbjct: 286 RVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYN 345

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            ++ GYC +G++  A  +   M    + P +  +N LI         D  D  +  M + 
Sbjct: 346 TLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDS 405

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G+ PD +T++ +++ +   G   K   + D+M+  GI+P +  ++ L     +    + A
Sbjct: 406 GIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAA 465

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           + +   + + G  P+++MF  +I G C    + RA ++ ++M +  I P+  TY TL+ G
Sbjct: 466 DDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQG 525

Query: 390 YGEAKQPWRAEELLQVMEEKGVRP 413
                +   A ELL+ M+ +G+RP
Sbjct: 526 RCREGKVEEARELLKEMKRRGIRP 549



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/349 (23%), Positives = 163/349 (46%), Gaps = 36/349 (10%)

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           +++L+RA C     ++A+     M   G+ P   T+N +   + +  +T     +  EM 
Sbjct: 169 FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMF 228

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF------- 250
             +++    T  I+++  CKEG ++ A  F+  M+ L V PN+V +N++I G+       
Sbjct: 229 RLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVE 288

Query: 251 -----LDIKDSDGVDK-----------------------ALTLMEEFGVKPDVVTFSTIM 282
                LDI  + GV+                         L  M+E G+ P  VT++T++
Sbjct: 289 GARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLI 348

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
           D + + G + K     D+MV+  I P +  +++L       G+  +A+ ++  M   G+ 
Sbjct: 349 DGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIV 408

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           P+ + +  +I+G+C     ++A +++++M   GI P L TY +L++   +  +   A++L
Sbjct: 409 PDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDL 468

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
            + +  +G  P       + D   A G    A  +LK  ++ R  +P++
Sbjct: 469 FEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDK-RNIVPDE 516


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 215/438 (49%), Gaps = 7/438 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA ++F+ +I EG +P ++TY TL+  L +     + + L+  +E+   +P+
Sbjct: 150 LCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPN 209

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            ++F+ +I++  +   V EA  IF +M   G  P   TYN+LI G   + + +    L+ 
Sbjct: 210 VVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMN 269

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D  + P+  T N +V A C +  + EA +VV  M+  G++P+ VTYN L   +   
Sbjct: 270 EMV-DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLR 328

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E   A ++   M +     N  +   +++GYCK  +++ AM     M   E+ PN V +
Sbjct: 329 NEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTY 388

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N+LI G   +     +  A++L  E    G  PD+VT+ T+ D       + K   +   
Sbjct: 389 NTLIHGLCHVGR---LQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 445

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +  +  +PDI +++ +  G  RAGE + A  + +++   G+ PNV  +  +I G C    
Sbjct: 446 IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 505

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ +M + G +PN  TY  +  G+    +  R  ELL+ M  +G     ST  L
Sbjct: 506 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTL 565

Query: 421 VADSWRAIGLAREAKRVL 438
           +       GL +  K++L
Sbjct: 566 LVGMLSDDGLDQSVKQIL 583



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 208/455 (45%), Gaps = 39/455 (8%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P + T   ++ +L    R     S ++K+ K G +PD+  F  +I      G + EA
Sbjct: 100 GIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEA 159

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +F KM   G +P   TY TLI G   VG    +++LL+ M Q  N +PN   ++ L+ 
Sbjct: 160 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ-GNCQPNVVVFSTLID 218

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C    + EA+N+  +M+  GI P+ VTYN+L     +  E      ++ EM ++++ P
Sbjct: 219 SLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMP 278

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF-----LDI----- 253
           +  T   +V   CKEG + +A   +  M    V PN+V +N+L+ G      +D+     
Sbjct: 279 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF 338

Query: 254 -----KDS-----------------DGVDKALTLMEEFG---VKPDVVTFSTIMDAWSSA 288
                KD                    VDKA+ L EE     + P+ VT++T++      
Sbjct: 339 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV 398

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
           G +     +F +MV  G  PD+  +  L+    +     KA ++L ++      P++ ++
Sbjct: 399 GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIY 458

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           TT++ G C A +++ A  ++  +   G+ PN+ TY  ++ G  +      A +L   M +
Sbjct: 459 TTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK 518

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            G  P   T  L+    R      EA R ++  EE
Sbjct: 519 NGCSPNDCTYNLIT---RGFLRNNEALRTIELLEE 550



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/412 (24%), Positives = 182/412 (44%), Gaps = 36/412 (8%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA   FN ++ +   P+ + +  L+ ++ + K   ++LSL  +++  G+ PD      +I
Sbjct: 53  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 112

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N+      VD A     K+   G +P  +T+ T                           
Sbjct: 113 NSLCHLNRVDFAFSALAKILKLGHQPDATTFTT--------------------------- 145

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
                    L+R  C +  I EA ++  KM+  G QP+ VTY TL     + G T  A +
Sbjct: 146 ---------LIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIR 196

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L  M+    +PN      ++   CK+  + +A      M    + PN+V +NSLI G  
Sbjct: 197 LLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLC 256

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
            + +   V   +  M +  + PDV T +T++DA    G++ +  ++ D M+  G+EP++ 
Sbjct: 257 KLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVV 316

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++ L  G+    E   A  +  +M       NV+ + T+I+G+C    + +AM ++E+M
Sbjct: 317 TYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEM 376

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
               + PN  TY TL+ G     +   A  L   M  +G  P   T + ++D
Sbjct: 377 SRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSD 428



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 148/306 (48%), Gaps = 9/306 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLV-AALTRQKRFKSILSLISKVEKDG 59
           ++ L  +G   EAH + + +I  G  P ++TY  L+     R +   ++    + V KD 
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 346

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +  + I +N +IN   +  +VD+AM +F++M      P T TYNTLI G  +VG+ ++++
Sbjct: 347 VA-NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            L   M     + P+  TY  L    C    +++A  ++  +  S   PD   Y T+   
Sbjct: 406 SLFHEMVARGQI-PDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDG 464

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + GE   A  +   + +  ++PN  T  I++ G CK+G + +A +    M +    PN
Sbjct: 465 MCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPN 524

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
              +N + +GFL  ++++ + + + L+EE    G   DV T + ++   S  GL    ++
Sbjct: 525 DCTYNLITRGFL--RNNEAL-RTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQ 581

Query: 297 IFDDMV 302
           I   +V
Sbjct: 582 ILCKIV 587



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 125/290 (43%), Gaps = 35/290 (12%)

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
           N+++EA +   +M+     P  V +N L  + A+         +  +M +  + P+  T 
Sbjct: 49  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
            I+++  C                    H N V F      F           AL  + +
Sbjct: 109 AIVINSLC--------------------HLNRVDF-----AF----------SALAKILK 133

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G +PD  TF+T++      G +G+   +FD M+  G +P++  +  L  G  + G    
Sbjct: 134 LGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSA 193

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  +L SM +    PNVV+F+T+I   C   ++  A +I+ +M   GI+PN+ TY +L+ 
Sbjct: 194 AIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIH 253

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           G  +  +      L+  M +  + P   T+  V D+    G+  EA  V+
Sbjct: 254 GLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVV 303



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 12/175 (6%)

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
           F  KP  + F+T+ +A S+          F+ M+     P    F+ L     +      
Sbjct: 41  FHSKP--LHFNTLDEALST----------FNRMLHKQPPPSTVDFNRLLTSIAKTKHHST 88

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
             S+   M  +G+ P+V     VI+  C+  ++  A S   K+ ++G  P+  T+ TL+ 
Sbjct: 89  LLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIR 148

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           G     +   A  L   M  +G +P   T   + +    +G    A R+L+S E+
Sbjct: 149 GLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ 203


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 213/423 (50%), Gaps = 5/423 (1%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NIL+     +G+  +A    + +I+ G +P+LIT++T++ A   +        +   +++
Sbjct: 317 NILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQE 376

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+ P+  ++N +++   ++ +V +A  ++++M+D G  P  +T+N L+ G    GK  +
Sbjct: 377 VGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEAD 436

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           S +L +  S    V P+   Y++ V   C    ++EA   +  M+  G+ P  V +N++ 
Sbjct: 437 SYELFRDWSLSSLV-PDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVI 495

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
            AY++ G    A +    M    + P+  TC  ++ G  K+G +++A   LY+M +  + 
Sbjct: 496 AAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLP 555

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
            N V F  L+ G+  + D+ G       ME  G+ PD + FS  +D  S AGL+ +  E 
Sbjct: 556 VNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEA 615

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F +M K G  P+  V++ L  G    G+  +A  +   MR+ G+ P++     +I+G+C 
Sbjct: 616 FSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCK 675

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             +M+ A   + +M  IG+ P+  TY TL+ GY +      A+E L  M   G  P  +T
Sbjct: 676 EGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITT 735

Query: 418 IQL 420
             +
Sbjct: 736 YNI 738



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 207/430 (48%), Gaps = 10/430 (2%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +I +G RP    +  ++    ++   +   SL+  + K   +PD   +N +INA    G 
Sbjct: 269 MIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGR 328

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             +A+     M  +GCKP+  T++T+I  + N G   E+ K+ + + Q+  + PN   YN
Sbjct: 329 TSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGI-QEVGLSPNVAMYN 387

Query: 140 ILVRAWCSKNSIEEAWNVVYK-MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
            L+  +     + +A N++Y+ M   GI PD  T+N L     +YG+   + ++  +   
Sbjct: 388 TLMSGYFKARDVCQA-NMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSL 446

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
           + + P+     + V+G C  G +++AM+FL  M E  + P++V FNS+I  +      D 
Sbjct: 447 SSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDN 506

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
             KA  +M  FG+ P   T S+++   S  G + + +++   M+  G+  +   F++L  
Sbjct: 507 AHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLD 566

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           GY + G+   A S+   M   G+ P+ + F+  I G   A  ++ A   + +M + G  P
Sbjct: 567 GYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVP 626

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           N   Y +L+ G     +   A +L + M +KG+ P   T  ++ +     G  +E +  +
Sbjct: 627 NNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIIN-----GFCKEGR--M 679

Query: 439 KSAEEDRQSM 448
           KSA +    M
Sbjct: 680 KSAFDAFAEM 689



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 176/367 (47%), Gaps = 1/367 (0%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D  + N ++     S    E+++I  +M++ G +P++S  + L +    VG      KLL
Sbjct: 207 DFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLL 266

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           + M +D   +P +  +NI++  +C K  +  A ++++ M     +PD   YN L  AY  
Sbjct: 267 RGMIRD-GPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRI 325

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G T  A   L  M  N  +P+  T   I++ +C EGN+ +A +    ++E+ + PN+ +
Sbjct: 326 RGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAM 385

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +N+L+ G+   +D    +     M + G+ PD  TF+ ++      G      E+F D  
Sbjct: 386 YNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWS 445

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
            + + PD  ++ +   G   AG+  +A   L  M + G+ P+VV F +VI+ +  A    
Sbjct: 446 LSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFED 505

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A   Y+ M   G+ P+  T  ++L G  +  +   A +LL  M +KG+   K    ++ 
Sbjct: 506 NAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLL 565

Query: 423 DSWRAIG 429
           D +  +G
Sbjct: 566 DGYFKVG 572



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 184/403 (45%), Gaps = 6/403 (1%)

Query: 1   MNILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
            NILV      GK  +++ +F         P    Y   VA L    +    +  +  + 
Sbjct: 421 FNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDML 480

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           + GM P  + FN++I A S +G  D A K ++ M   G  P++ST ++++ G    G+ +
Sbjct: 481 EKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQ 540

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           E+  LL  M  DK +  N   + +L+  +        A ++ Y+M A GI PDA+ ++  
Sbjct: 541 EARDLLYKMI-DKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAF 599

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
               ++ G    A +   EM      PN      ++ G C  G + +A++    M++  +
Sbjct: 600 IDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGL 659

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P++   N +I GF           A   M   GV PD VT++T++  +     M    E
Sbjct: 660 LPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADE 719

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
             + M  +G +PDI  ++I  +G+  + +  +A ++L  +   GV PN V + T+++  C
Sbjct: 720 FLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVC 779

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
             + + RAM +  K+ ++   PN+ T   LL  + +   P +A
Sbjct: 780 TDM-LDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKA 821



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 157/339 (46%), Gaps = 1/339 (0%)

Query: 100 STYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVY 159
           S  NTL++G+ N     ESL++L  M ++  V+P+    +IL R           W ++ 
Sbjct: 209 SILNTLMRGFMNSEMAYESLEILSRM-REVGVRPSSSAISILFRLLLRVGDYGSVWKLLR 267

Query: 160 KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEG 219
            M+  G +P    +N +   + Q G    AE +LF M      P+     I+++ Y   G
Sbjct: 268 GMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRG 327

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
              DA+ FL+ M +    P+L+ F+++I  F +  +     K    ++E G+ P+V  ++
Sbjct: 328 RTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYN 387

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
           T+M  +  A  + +   ++++M   GI PD   F+IL  G  + G+   +  +       
Sbjct: 388 TLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLS 447

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
            + P+  ++   ++G C A ++  AM   E M E G+ P++  + +++  Y  A     A
Sbjct: 448 SLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNA 507

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            +  ++M   G+ P  ST   +       G  +EA+ +L
Sbjct: 508 HKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLL 546



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 107/226 (47%), Gaps = 18/226 (7%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA+  F+ + ++G  P    Y +L+  L    +    L L  ++ + G+ PD    
Sbjct: 607 GLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTT 666

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +IN   + G +  A   F +M   G  P T TYNTLI GY          K+L ++S 
Sbjct: 667 NIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGY---------CKVLDMVSA 717

Query: 128 DKNVK--------PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           D+ +         P+  TYNI ++ +CS   I  A  ++ +++A G+ P+ VTYNT+  A
Sbjct: 718 DEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNA 777

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
                   RA  +  ++      PN  T  +++S +CK+G  E A+
Sbjct: 778 VCT-DMLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKAL 822



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 68/309 (22%), Positives = 131/309 (42%), Gaps = 37/309 (11%)

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII--------------- 211
           + D    NTL R +      Y + ++L  M+   VRP+     I+               
Sbjct: 205 ESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWK 264

Query: 212 --------------------VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF- 250
                               +  +C++G +  A   L+ M +    P++  +N LI  + 
Sbjct: 265 LLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYR 324

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
           +  + SD +   L LM + G KP ++TFSTI+ A+ + G + + ++IF+ + + G+ P++
Sbjct: 325 IRGRTSDALG-FLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNV 383

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
            +++ L  GY +A +  +A  +   MR  G+ P+   F  +++G     K   +  ++  
Sbjct: 384 AMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRD 443

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
                + P+   Y+  + G   A Q   A + L+ M EKG+ P       V  ++   G 
Sbjct: 444 WSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGF 503

Query: 431 AREAKRVLK 439
              A +  K
Sbjct: 504 EDNAHKAYK 512



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/205 (20%), Positives = 83/205 (40%), Gaps = 35/205 (17%)

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           +  + N+L++GF++ + +    + L+ M E GV+P     S +       G  G   ++ 
Sbjct: 207 DFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLL 266

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
             M++ G  P  H F+I+   + + G  + AES+L  M K+   P+V  +  +I    NA
Sbjct: 267 RGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILI----NA 322

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            +++   S                                A   L +M + G +P   T 
Sbjct: 323 YRIRGRTS-------------------------------DALGFLHLMIKNGCKPSLITF 351

Query: 419 QLVADSWRAIGLAREAKRVLKSAEE 443
             +  ++   G   EA+++ +  +E
Sbjct: 352 STIITAFCNEGNVVEARKIFEGIQE 376


>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 829

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 224/451 (49%), Gaps = 39/451 (8%)

Query: 21  IEEGHRPT-LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +EE + P   +TY  LVAA  R    K    +I  + + G+ P++I +  +I+A  ++G 
Sbjct: 349 MEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGK 408

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
            DEA+K+F  MK++GC P T TYN ++   G   +  E +K+L  M  +    PN  T+N
Sbjct: 409 EDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSN-GCFPNRATWN 467

Query: 140 ILVRAWCSKNSIEEAWNVVYK-MVASGIQPDAVTYNTLARAYAQ----------YGETYR 188
            ++ A C    +++  N V++ M + G +PD  T+NTL  AY +          YGE  R
Sbjct: 468 TIL-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTR 526

Query: 189 A-------------------------EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED 223
           A                         E ++ +M++   +P E +  +++  Y K GN   
Sbjct: 527 AGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLG 586

Query: 224 AMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD 283
             R    + E ++ P+ ++  +L+      +   G ++A TL ++ G KPD+V F++++ 
Sbjct: 587 IERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLS 646

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
            ++   +  + + I   + + G+ PD+  ++ L   YVR GE  KAE IL ++ K  + P
Sbjct: 647 IFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKP 706

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           ++V + TVI G+C    MQ A+ +  +M E GI P + TY T + GY         E+++
Sbjct: 707 DLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMYGEIEDVI 766

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           + M +   RP + T ++V D +   G   EA
Sbjct: 767 ECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 797



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/477 (23%), Positives = 220/477 (46%), Gaps = 43/477 (9%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDGMKPDSIL 66
           GK  +A  +F  + E G  PTL+TY  ++    +  R ++ IL ++ ++   G+K D   
Sbjct: 231 GKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLEEMRSKGLKFDEFT 290

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            + +++AC+  G + EA   F ++K  G +P T TYN L++ +G  G   E+L +L+ M 
Sbjct: 291 CSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEM- 349

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++ N   +  TYN LV A+      +EA  V+  M   G+ P+A+TY T+  AY + G+ 
Sbjct: 350 EENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKE 409

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++ + M+     PN  T   ++S   K+    + ++ L  MK     PN   +N++
Sbjct: 410 DEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTI 469

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +    +      V++    M+  G +PD  TF+T++ A+   G      +++ +M +AG 
Sbjct: 470 LALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 529

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW----------- 355
              +  ++ L     R G+ +  E++++ M+  G  P    ++ ++  +           
Sbjct: 530 NACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIER 589

Query: 356 --------------------------CNAVK-MQRAMSIYEKMCEIGINPNLKTYETLLW 388
                                     C A+   +RA ++++K    G  P++  + ++L 
Sbjct: 590 IEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKH---GYKPDMVIFNSMLS 646

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
            +       +AE +LQ + E G+ P   T   + D +   G   +A+ +LK+ E+ +
Sbjct: 647 IFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQ 703



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/399 (23%), Positives = 177/399 (44%), Gaps = 36/399 (9%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA  +F  + E G  P   TY  +++ L ++ R   ++ ++  ++ +G  P+   +
Sbjct: 407 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATW 466

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++  C   G      ++F++MK  G +P   T+NTLI  YG  G   ++ K+   M++
Sbjct: 467 NTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTR 526

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                    TYN L+ A   K       NV+  M + G +P   +Y+ + + YA+ G   
Sbjct: 527 -AGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYL 585

Query: 188 RAEQMLFEMQNNQVRPN--------------------ERTCGI---------------IV 212
             E++   +   Q+ P+                    ER   +               ++
Sbjct: 586 GIERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSML 645

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           S + +    + A   L  + E  ++P+LV +NSL+  ++   +    ++ L  +E+  +K
Sbjct: 646 SIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLK 705

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           PD+V+++T++  +   GLM +   +  +M + GI P I  ++    GY   G   + E +
Sbjct: 706 PDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMYGEIEDV 765

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
           +  M K    PN + F  V+ G+C A K   AM    K+
Sbjct: 766 IECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 804



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/397 (23%), Positives = 181/397 (45%), Gaps = 4/397 (1%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           LV  L R+ ++     L+ K+       D   +  +++A S +G  ++A+ +F++MK+ G
Sbjct: 188 LVRILGRESQYSVAAKLLDKIPLQDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKEMG 247

Query: 95  CKPTTSTYNTLIKGYGNVGKP-EESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
             PT  TYN ++  +G +G+   + L +L+ M + K +K ++ T + ++ A   +  + E
Sbjct: 248 PSPTLVTYNVILDVFGKMGRSWRKILGVLEEM-RSKGLKFDEFTCSTVLSACAREGLLRE 306

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A +   ++ + G +P  VTYN L + + + G    A  +L EM+ N    +  T   +V+
Sbjct: 307 AKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVA 366

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
            Y + G  ++A   +  M +  V PN + + ++I  +      D   K    M+E G  P
Sbjct: 367 AYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP 426

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           +  T++ ++          +  ++  DM   G  P+   ++ +       G  +    + 
Sbjct: 427 NTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVF 486

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M+  G  P+   F T+IS +        A  +Y +M   G N  + TY  LL      
Sbjct: 487 REMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR- 545

Query: 394 KQPWRA-EELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           K  WR+ E ++  M+ KG +P +++  L+   +   G
Sbjct: 546 KGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGG 582



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 111/219 (50%), Gaps = 8/219 (3%)

Query: 21  IEEGH-RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           I EG   P+ +   TL+ A  + +         +  +K G KPD ++FN+M++  + +  
Sbjct: 594 INEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNM 653

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQDKNVKPNDR 136
            D+A  I Q + + G  P   TYN+L+  Y   G   K EE LK L+       +KP+  
Sbjct: 654 YDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLE----KSQLKPDLV 709

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           +YN +++ +C K  ++EA  ++ +M   GI+P   TYNT    Y   G     E ++  M
Sbjct: 710 SYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECM 769

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
             N  RPNE T  ++V GYC+ G   +AM F+ ++K  +
Sbjct: 770 AKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFD 808



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/374 (20%), Positives = 172/374 (45%), Gaps = 36/374 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L  K + +E   +   +   G  P   T+ T++A    +   K +  +  +++  G 
Sbjct: 435 LSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGF 494

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD   FN +I+A    G+  +A K++ +M  +G     +TYN L+      G       
Sbjct: 495 EPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGEN 554

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNS------IEE---------AWNVVYKMVAS- 164
           ++  M + K  KP + +Y+++++ +    +      IEE         +W ++  ++ + 
Sbjct: 555 VISDM-KSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLAN 613

Query: 165 -------------------GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                              G +PD V +N++   + +     +AE +L  +  + + P+ 
Sbjct: 614 FKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDL 673

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   ++  Y + G    A   L  +++ ++ P+LV +N++IKGF          + L+ 
Sbjct: 674 VTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSE 733

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M E G++P + T++T +  +++ G+ G+ +++ + M K    P+   F ++  GY RAG+
Sbjct: 734 MTERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGK 793

Query: 326 PQKAESILTSMRKY 339
             +A   ++ ++ +
Sbjct: 794 YSEAMDFVSKIKTF 807



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/393 (20%), Positives = 166/393 (42%), Gaps = 10/393 (2%)

Query: 51  LISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG 110
           L+       +K D  +   ++           A K+  K+           Y T++  Y 
Sbjct: 169 LVLSSNSGALKLDHHVIEILVRILGRESQYSVAAKLLDKIPLQDYMLDVRAYTTILHAYS 228

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW----NVVYKMVASGI 166
             GK E+++ L + M ++    P   TYN+++  +     +  +W     V+ +M + G+
Sbjct: 229 RTGKYEKAINLFERM-KEMGPSPTLVTYNVILDVF---GKMGRSWRKILGVLEEMRSKGL 284

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR 226
           + D  T +T+  A A+ G    A+    E+++    P   T   ++  + K G   +A+ 
Sbjct: 285 KFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALS 344

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
            L  M+E     + V +N L+  +     S      + +M + GV P+ +T++T++DA+ 
Sbjct: 345 VLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYG 404

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
            AG   +  ++F  M +AG  P+   ++ +     +     +   +L  M+  G  PN  
Sbjct: 405 KAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRA 464

Query: 347 MFTTVISGWCNAVKMQRAMS-IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
            + T+++  C    M + ++ ++ +M   G  P+  T+ TL+  YG       A ++   
Sbjct: 465 TWNTILA-LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGE 523

Query: 406 MEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           M   G     +T   + ++    G  R  + V+
Sbjct: 524 MTRAGFNACVTTYNALLNALARKGDWRSGENVI 556


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 216/417 (51%), Gaps = 1/417 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  +A  +F+ ++  G +P + TYTT++  L +     +   LI K+ + G 
Sbjct: 168 INGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGC 227

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD + ++ +I++  +   V+EA+ IF  MK  G  PT  +Y +LI+G  +  + +E+  
Sbjct: 228 QPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASA 287

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M+   N+ P+  T+++L+  +C + ++ EA  V+  M   G++P+ +TYN+L   Y
Sbjct: 288 MLNEMTS-LNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGY 346

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           +   E   A ++   M     +P+  +  I+++GYC    +++A +    M    + PN 
Sbjct: 347 SLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNT 406

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V + +LI  F  +       +    M   G  PD+ T+S +++ +   G +GK   +F  
Sbjct: 407 VSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRA 466

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M    ++P++ +++IL     ++G    A  + + +  +G+ P+V ++TT+I+G C    
Sbjct: 467 MQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGL 526

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           +  A+  + KM E G  PN  +Y  ++ G+ + K   RA +L+  M +KG    + T
Sbjct: 527 LDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 216/454 (47%), Gaps = 43/454 (9%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P   T   L+      +      S+++KV K G++P  I F  +IN   ++G   +A
Sbjct: 121 GLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQA 180

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +++F  M   GC+P   TY T+I G   +G+   +  L++ M +    +P+  TY+ L+ 
Sbjct: 181 LELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGE-VGCQPDVVTYSTLID 239

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C    + EA ++   M A GI P  V+Y +L +    +     A  ML EM +  + P
Sbjct: 240 SLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMP 299

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF------------L 251
           +  T  +++  +CKEGN+ +A   L  M E+ V PN++ +NSL+ G+             
Sbjct: 300 DIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLF 359

Query: 252 DIKDSDG--------------------VDKALTLMEEF---GVKPDVVTFSTIMDAWSSA 288
           D+  + G                    +D+A  L  E    G+ P+ V+++T++ A+   
Sbjct: 360 DVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQL 419

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
           G + + +E+F DM   G  PD+  +S+L +G+ + G   KA  +  +M+   + PN+VM+
Sbjct: 420 GKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMY 479

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           T +I   C +  +  A  ++ ++   G+ P+++ Y T++ G  +      A E  + MEE
Sbjct: 480 TILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEE 539

Query: 409 KGVRPKKSTIQLV-------ADSWRAIGLAREAK 435
            G  P + +  ++        D  RA+ L  E +
Sbjct: 540 DGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMR 573



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/461 (22%), Positives = 199/461 (43%), Gaps = 37/461 (8%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRF-KSILSLISKVEKDGMKPDSILFNAMINACS 75
           FN ++     P +I +  L++A+ R +++  +++SL  ++E  G+ P++   N +IN   
Sbjct: 78  FNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFC 137

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
              +VD    +  K+   G +PT  T+ TL                              
Sbjct: 138 LMQHVDLGFSVLAKVIKLGLQPTIITFTTL------------------------------ 167

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
                 +   C      +A  +   MVA G QPD  TY T+     + GET  A  ++ +
Sbjct: 168 ------INGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKK 221

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M     +P+  T   ++   CK+  + +A+     MK   + P +V + SLI+G      
Sbjct: 222 MGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSR 281

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
                  L  M    + PD+VTFS ++D +   G + + Q +   M + G+EP++  ++ 
Sbjct: 282 WKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNS 341

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  GY    E  +A  +   M   G  P+V  ++ +I+G+C   ++  A  ++ +M   G
Sbjct: 342 LMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQG 401

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           + PN  +Y TL+  + +  +   A EL + M   G  P   T  ++ + +   G   +A 
Sbjct: 402 LTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAF 461

Query: 436 RVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQI 476
           R+ ++ +            I ++S+ +  NL+ +   F ++
Sbjct: 462 RLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSEL 502



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 180/368 (48%)

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +A S   N+D+A+  F  M      P    +N L+     + +  +++  L    +   +
Sbjct: 63  DASSSFRNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGL 122

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PN  T NIL+  +C    ++  ++V+ K++  G+QP  +T+ TL     + GE  +A +
Sbjct: 123 SPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALE 182

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  +M     +P+  T   I++G CK G    A   + +M E+   P++V +++LI    
Sbjct: 183 LFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLC 242

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
             +  +      + M+  G+ P VV++++++    S     +   + ++M    I PDI 
Sbjct: 243 KDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIV 302

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            FS+L   + + G   +A+ +L +M + GV PNV+ + +++ G+   +++  A  +++ M
Sbjct: 303 TFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVM 362

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
              G  P++ +Y  L+ GY   K+   A++L   M  +G+ P   +   +  ++  +G  
Sbjct: 363 ITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKL 422

Query: 432 REAKRVLK 439
           REA+ + K
Sbjct: 423 REARELFK 430


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 211/410 (51%), Gaps = 1/410 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  +A  +F+ ++  G++P + TYTT++  L +     +   L  K+ + G 
Sbjct: 199 INGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGC 258

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD + ++ +I++  +   V+EA+ IF  MK  G  P   TYN+LI+G  N  +  E+  
Sbjct: 259 QPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASA 318

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M    N+ PN  T+++L+  +C + ++ EA  V+  M   G++P+ VTY++L   Y
Sbjct: 319 MLNEM-MSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGY 377

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           +   E   A ++   M     +P+  +  I+++GYCK   + +A +    M    + P++
Sbjct: 378 SLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDI 437

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+LI G   +            M   G  PD+ T+S ++D +   G + K   +F  
Sbjct: 438 VSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRA 497

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M    ++P++ +++IL     ++   ++A  + + +   G+ PNV ++TT+I+G C    
Sbjct: 498 MQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGL 557

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +  A+  +  M E G  PN  +Y  ++ G+ + K   RA +L+  M EKG
Sbjct: 558 LDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKG 607



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 209/421 (49%), Gaps = 1/421 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P   T   L+    + +R     S+++K+ K G++   + FN +IN   + G   +A
Sbjct: 152 GLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQA 211

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +++F  M   G +P   TY T+I G   +G+   +  L + M +    +P+  TY+ ++ 
Sbjct: 212 VELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGE-AGCQPDVVTYSTIID 270

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C    + EA ++   M A GI P+  TYN+L +    +     A  ML EM +  + P
Sbjct: 271 SLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMP 330

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  T  ++++ +CKEGN+ +A   L  M E+ V PN+V ++SL+ G+    +     K  
Sbjct: 331 NIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLF 390

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            +M   G KPDV +++ +++ +  A  +G+ +++F++M+  G+ PDI  ++ L  G  + 
Sbjct: 391 DVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQL 450

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G  ++A  +  +M   G  P++  ++ ++ G+C    + +A  ++  M    + PN+  Y
Sbjct: 451 GRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMY 510

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             L+    +++    A +L   +  +G++P       + +     GL  EA    ++ EE
Sbjct: 511 NILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEE 570

Query: 444 D 444
           D
Sbjct: 571 D 571



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 217/431 (50%), Gaps = 8/431 (1%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFK-SILSLISKVEKDGMKPDSILFNAM 70
           +A   FN ++    RP +I +  L++A+ + + +  +++SL  ++E  G+ PD+   + +
Sbjct: 104 DALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHML 163

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           IN   +   VD    +  K+   G + T  T+NTLI G   VGK  ++++L   M   + 
Sbjct: 164 INCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVA-RG 222

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
            +P+  TY  ++   C       A  +  KM  +G QPD VTY+T+  +  +      A 
Sbjct: 223 YQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 282

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            +   M+   + PN  T   ++ G C      +A   L  M  L + PN+V F+ LI  F
Sbjct: 283 DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIF 342

Query: 251 L---DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
               ++ ++ GV K +T   E GV+P+VVT+S++M+ +S    + + +++FD M+  G +
Sbjct: 343 CKEGNVFEARGVLKTMT---EMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCK 399

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+  ++IL  GY +A    +A+ +   M   G+ P++V + T+I G C   +++ A  +
Sbjct: 400 PDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDL 459

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           ++ M   G  P+L TY  LL G+ +     +A  L + M+   ++P      ++ D+   
Sbjct: 460 FKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCK 519

Query: 428 IGLAREAKRVL 438
               +EA+++ 
Sbjct: 520 SRNLKEARKLF 530



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/369 (22%), Positives = 178/369 (48%)

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N  S   N+D+A+  F  M     +P    +N L+     +    +++  L    +   +
Sbjct: 94  NDASSFRNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGL 153

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  T ++L+  +     ++  ++V+ K++  G+Q   VT+NTL     + G+  +A +
Sbjct: 154 SPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVE 213

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  +M     +P+  T   I++G CK G    A     +M E    P++V ++++I    
Sbjct: 214 LFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLC 273

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
             +  +      + M+  G+ P++ T+++++    +     +   + ++M+   I P+I 
Sbjct: 274 KDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIV 333

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            FS+L   + + G   +A  +L +M + GV PNVV ++++++G+    ++  A  +++ M
Sbjct: 334 TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVM 393

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
              G  P++ +Y  L+ GY +AK+   A++L   M  +G+ P   +   + D    +G  
Sbjct: 394 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 453

Query: 432 REAKRVLKS 440
           REA  + K+
Sbjct: 454 REAHDLFKN 462



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 138/277 (49%), Gaps = 1/277 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +NI   +G   EA  +   + E G  P ++TY++L+   + Q        L   +   G 
Sbjct: 339 INIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGC 398

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD   +N +IN   ++  + EA ++F +M   G  P   +YNTLI G   +G+  E+  
Sbjct: 399 KPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHD 458

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M  + N+ P+  TY+IL+  +C +  + +A+ +   M ++ ++P+ V YN L  A 
Sbjct: 459 LFKNMLTNGNL-PDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 517

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A ++  E+    ++PN +    I++G CKEG +++A+     M+E    PN 
Sbjct: 518 CKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNE 577

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
             +N +I+GFL  KD     + +  M E G   DV T
Sbjct: 578 FSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 152/337 (45%), Gaps = 36/337 (10%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           + +EA  IF+ +  +G  P + TY +L+  L    R++   ++++++    + P+ + F+
Sbjct: 277 RVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFS 336

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +IN   + GNV EA  + + M + G +P   TY++L+ GY    +  E+ KL  +M   
Sbjct: 337 LLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMIT- 395

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K  KP+  +YNIL+  +C    I EA  +  +M+  G+ PD V+YNTL     Q G    
Sbjct: 396 KGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLRE 455

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEG----------------------------- 219
           A  +   M  N   P+  T  I++ G+CK+G                             
Sbjct: 456 AHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILID 515

Query: 220 ------NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
                 N+++A +    +    + PN+ ++ ++I G       D   +A   MEE G  P
Sbjct: 516 AMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPP 575

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
           +  +++ I+  +       +  ++  +M + G   D+
Sbjct: 576 NEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADV 612


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 124/481 (25%), Positives = 238/481 (49%), Gaps = 35/481 (7%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + + + +GK  EA  +   ++  G    ++  TTL+    +Q    S L L  K+ ++G+
Sbjct: 301 IGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGI 360

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+++ +  +I  C ++GN+D+A +I+ +MK+    PT    N+LI+GY     PEE+ K
Sbjct: 361 CPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASK 420

Query: 121 LLQ------------------------LMSQ---------DKNVKPNDRTYNILVRAWCS 147
           L                           MS+          K V+P+  +YN ++   C 
Sbjct: 421 LFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQ 480

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
           +  ++ A  V  +M+  G++P+ +TY+ L   Y + G+T  A  +   M+   + P++ T
Sbjct: 481 QGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFT 540

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
           C II++G CK G   ++   L ++ +    P  + +N +I GF+     +      T M 
Sbjct: 541 CNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMC 600

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
           + GV P+V T++ +++ +  +  M    ++ D+M   GIE D+ V+  L  G+ R G+  
Sbjct: 601 KIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMV 660

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            A  +L+ +++ G+ PN V+++++ISG+     M+ A+ ++++M   GI  +L+ Y TL+
Sbjct: 661 NASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLI 720

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS 447
            G  +  +   A EL   M  KG+ P   T  ++       G    A+++L+  + DR+ 
Sbjct: 721 SGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILE--DMDRKC 778

Query: 448 M 448
           M
Sbjct: 779 M 779



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 204/414 (49%), Gaps = 2/414 (0%)

Query: 10  PHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNA 69
           P EA  +F+  +  G    + TY +L++ L ++ +     S+  K+ + G++P  + +N 
Sbjct: 415 PEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNN 473

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK 129
           MI    + G++D A  +F +M + G KP   TY+ L+ GY   G  E +  L   M + +
Sbjct: 474 MILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRM-RGE 532

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
           N+ P+D T NI++   C      E+ + + K+V  G  P  +TYN +   + + G    A
Sbjct: 533 NIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSA 592

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
             +  EM    V PN  T   +++G+CK  NM+ A++ +  MK   +  ++ V+ +LI G
Sbjct: 593 LAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDG 652

Query: 250 FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
           F    D     + L+ ++E G+ P+ V +S+++  +     M     +   M+  GI  D
Sbjct: 653 FCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCD 712

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
           + +++ L  G ++ G+   A  +   M   G+ P+++ ++ +I G CN  +++ A  I E
Sbjct: 713 LQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILE 772

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
            M    + P +  Y TL+ G+ +      A  L   M +KG+ P  +T  ++ +
Sbjct: 773 DMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVN 826



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 198/386 (51%), Gaps = 1/386 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA  I+  ++ +G RP++++Y  ++    +Q    S   +  ++ + G+KP+
Sbjct: 443 LCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPN 502

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I ++ +++   + G+ + A  ++ +M+     P+  T N +I G    G+  ES   L+
Sbjct: 503 LITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLK 562

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            + Q+  + P   TYN ++  +  + S+  A  V  +M   G+ P+  TY  L   + + 
Sbjct: 563 KLVQEGFI-PTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKS 621

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                A +++ EM+N  +  +      ++ G+C++G+M +A + L  ++E+ + PN VV+
Sbjct: 622 NNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVY 681

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           +S+I GF  +++ +        M   G+  D+  ++T++      G +    E++ +M+ 
Sbjct: 682 SSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLA 741

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GI PD+  +S+L  G    G+ + A+ IL  M +  + P V ++ T+I+G      +Q 
Sbjct: 742 KGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQE 801

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWG 389
           A  ++ +M + G+ P+  TY+ L+ G
Sbjct: 802 AFRLHNEMLDKGLVPDDTTYDILVNG 827



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 124/541 (22%), Positives = 236/541 (43%), Gaps = 76/541 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N  V   + ++A   FN LIE+   P L      ++ L +    +    + +K+   G+
Sbjct: 161 LNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGV 220

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K D    + MI A    G ++EA   F++ K+ G +     Y+ +I+    V K  +S+ 
Sbjct: 221 KGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEA---VCKKPDSVA 277

Query: 121 LLQLMSQ--DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
            L L+ +  DK   P++  +  ++     +  + EA  V  +M++ G   + V   TL +
Sbjct: 278 ALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMK 337

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            Y + G+   A ++  +M  N + PN  T  +I+   CK GNM+ A     +MK  ++ P
Sbjct: 338 GYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISP 397

Query: 239 NLVVFNSLIKGFLDIKDSDGVDK-------------------------------ALTLME 267
            +   NSLI+G+L  +  +   K                               A ++ E
Sbjct: 398 TVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWE 457

Query: 268 EF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
           +    GV+P VV+++ ++      G M     +F +M++ G++P++  +S+L  GY + G
Sbjct: 458 KMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKG 517

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK------------------------ 360
           + + A  +   MR   + P+      +I+G C A +                        
Sbjct: 518 DTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYN 577

Query: 361 -----------MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
                      +  A+++Y +MC+IG++PN+ TY  L+ G+ ++     A +++  M+ K
Sbjct: 578 CIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNK 637

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRK-QNLSA 468
           G+    +    + D +   G    A ++L   +E   S PNK    ++ S  RK QN+ A
Sbjct: 638 GIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLS-PNKVVYSSMISGFRKLQNMEA 696

Query: 469 S 469
           +
Sbjct: 697 A 697



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 92/375 (24%), Positives = 177/375 (47%), Gaps = 2/375 (0%)

Query: 51  LISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG 110
           LI    +   + DS +FN ++N+  ++  +++A+  F  + +    P  +  N  +    
Sbjct: 141 LIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELV 200

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
                 E+  +   M+  K VK +  T ++++RA   +  +EEA     +    G++ DA
Sbjct: 201 KNNMIREARDVYNKMAS-KGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDA 259

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
             Y+ +  A  +  ++  A  +L EM++    P+E     ++    K+G M +A++    
Sbjct: 260 RAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGE 319

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
           M       N+VV  +L+KG+    D D   +    M E G+ P+ VT++ I++     G 
Sbjct: 320 MLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGN 379

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           M K  EI++ M    I P +   + L +GY++A  P++A  +       G+  NV  + +
Sbjct: 380 MDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNS 438

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           ++S  C   KM  A SI+EKM   G+ P++ +Y  ++ G+ +      A  +   M EKG
Sbjct: 439 LLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKG 498

Query: 411 VRPKKSTIQLVADSW 425
           ++P   T  ++ D +
Sbjct: 499 LKPNLITYSVLMDGY 513



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 156/361 (43%), Gaps = 39/361 (10%)

Query: 2   NILVG---KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           N+++G   +G    A+ +F  ++E+G +P LITY+ L+    ++   +    L  ++  +
Sbjct: 473 NMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGE 532

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
            + P     N +IN   ++G   E+    +K+   G  PT  TYN +I G+   G    +
Sbjct: 533 NIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSA 592

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           L +   M +   V PN  TY  L+  +C  N+++ A  V+ +M   GI+ D   Y  L  
Sbjct: 593 LAVYTEMCK-IGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALID 651

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERT------------------------------C 208
            + + G+   A Q+L E+Q   + PN+                                C
Sbjct: 652 GFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPC 711

Query: 209 GI-----IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
            +     ++SG  KEG +  A      M    + P+L+ ++ LI G  +    +   K L
Sbjct: 712 DLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKIL 771

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M+   + P V  ++T++      G + +   + ++M+  G+ PD   + IL  G V+ 
Sbjct: 772 EDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKD 831

Query: 324 G 324
           G
Sbjct: 832 G 832



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 97/190 (51%), Gaps = 1/190 (0%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           Y  L+    R+    +   L+S++++ G+ P+ +++++MI+   +  N++ A+ + ++M 
Sbjct: 646 YCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMI 705

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
           + G       Y TLI G    GK   + +L   M   K + P+  TY++L+   C+K  +
Sbjct: 706 NEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLA-KGIMPDLITYSVLIHGLCNKGQL 764

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           E A  ++  M    + P    YNTL   + + G    A ++  EM +  + P++ T  I+
Sbjct: 765 ENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDIL 824

Query: 212 VSGYCKEGNM 221
           V+G  K+GN+
Sbjct: 825 VNGKVKDGNL 834



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 90/181 (49%), Gaps = 1/181 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG    A  + + L E G  P  + Y+++++   + +  ++ L L  ++  +G+  D  +
Sbjct: 656 KGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQI 715

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +  +I+   + G +  A +++ +M   G  P   TY+ LI G  N G+ E + K+L+ M 
Sbjct: 716 YTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMD 775

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + K + P    YN L+     + +++EA+ +  +M+  G+ PD  TY+ L     + G  
Sbjct: 776 R-KCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834

Query: 187 Y 187
           +
Sbjct: 835 F 835


>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Glycine max]
          Length = 829

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 224/439 (51%), Gaps = 1/439 (0%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           V  G   E   + + +  +G  P  ITYTT++ A  +  R    L L S ++  G  P+ 
Sbjct: 367 VRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNV 426

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
             +N+++    +    ++ +K+  +MK +GC P  +T+NT++      GK     K+L+ 
Sbjct: 427 YTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLRE 486

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M ++   +P+  T+N L+ A+    S  ++  +  +MV SG  P   TYN L  A A+ G
Sbjct: 487 M-KNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRG 545

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +   AE ++ +M+    +PNE +  +++  Y K GN++   +    + +  V P+ ++  
Sbjct: 546 DWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLR 605

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +L+      +   G+++A   ++++G KPD+V  ++++  ++   +  K +E+   + + 
Sbjct: 606 TLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHEC 665

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G++P++  ++ L   YVR GE  KAE +L  ++  G  P+VV + TVI G+C    MQ A
Sbjct: 666 GLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEA 725

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           + +  +M   GI P + TY T L GY   +    A E+++ M E   RP + T +++ D 
Sbjct: 726 IGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDG 785

Query: 425 WRAIGLAREAKRVLKSAEE 443
           +   G   EA   +   +E
Sbjct: 786 YCKAGKYEEAMDFVSKIKE 804



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 226/474 (47%), Gaps = 43/474 (9%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDGMKPDSIL 66
           GK   A  +F  + E G  PTL+TY  ++    +  R +  IL L+ ++   G++ D   
Sbjct: 229 GKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFT 288

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            + +I+AC   G +DEA K   ++K +G KP T TYN++++ +G  G   E+L +L+ M 
Sbjct: 289 CSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEM- 347

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +D N  P+  TYN L   +     ++E   V+  M + G+ P+A+TY T+  AY + G  
Sbjct: 348 EDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGRE 407

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++   M++    PN  T   +++   K+   ED ++ L  MK     PN   +N++
Sbjct: 408 DDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTM 467

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +    +    + V+K L  M+  G +PD  TF+T++ A++  G      +++ +MVK+G 
Sbjct: 468 LAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGF 527

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN---------------------- 344
            P +  ++ L     R G+ + AES++  MR  G  PN                      
Sbjct: 528 TPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEK 587

Query: 345 --------------VVMFTTVISGW-CNAVK-MQRAMSIYEKMCEIGINPNLKTYETLLW 388
                         +++ T V++   C  ++ M+RA   ++++ + G  P+L    ++L 
Sbjct: 588 VEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERA---FDQLQKYGYKPDLVVINSMLS 644

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
            +   K   +A E+L  + E G++P   T   + D +   G   +A+ VLK  +
Sbjct: 645 MFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQ 698



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 181/392 (46%), Gaps = 3/392 (0%)

Query: 4   LVGKGKPHE-AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           ++G+   H  A  +F+ +  E +   +  YTT++ +  R  ++K  + L  K+++ G+ P
Sbjct: 189 ILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDP 248

Query: 63  DSILFNAMINACSESGNV-DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
             + +N M++   + G   D  +++  +M+  G +    T +T+I   G  G  +E+ K 
Sbjct: 249 TLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARKF 308

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           L  +  +   KP   TYN +++ +       EA +++ +M  +   PD+VTYN LA  Y 
Sbjct: 309 LAELKFN-GYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYV 367

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           + G       ++  M +  V PN  T   ++  Y K G  +DA+R    MK+L   PN+ 
Sbjct: 368 RAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVY 427

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            +NS++        ++ V K L  M+  G  P+  T++T++   S  G      ++  +M
Sbjct: 428 TYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREM 487

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
              G EPD   F+ L   Y R G    +  +   M K G  P V  +  +++        
Sbjct: 488 KNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDW 547

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
           + A S+ + M   G  PN  +Y  LL  Y +A
Sbjct: 548 KAAESVIQDMRTKGFKPNENSYSLLLHCYSKA 579



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/404 (21%), Positives = 182/404 (45%), Gaps = 34/404 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A  +F+ + + G  P + TY +++A L ++ R + ++ ++ +++ +G  P+   +
Sbjct: 405 GREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATW 464

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS- 126
           N M+  CSE G  +   K+ ++MK+ G +P   T+NTLI  Y   G   +S K+   M  
Sbjct: 465 NTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVK 524

Query: 127 ------------------------------QD---KNVKPNDRTYNILVRAWCSKNSIEE 153
                                         QD   K  KPN+ +Y++L+  +    +++ 
Sbjct: 525 SGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKG 584

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
              V  ++    + P  +   TL     +       E+   ++Q    +P+      ++S
Sbjct: 585 IEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLS 644

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
            + +      A   L+ + E  + PNL  +N L+  ++   +    ++ L  ++  G +P
Sbjct: 645 MFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEP 704

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           DVV+++T++  +   GLM +   +  +M   GI+P I  ++    GY       +A  ++
Sbjct: 705 DVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVI 764

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
             M ++   P+ + +  ++ G+C A K + AM    K+ E+ I+
Sbjct: 765 RFMIEHNCRPSELTYKILVDGYCKAGKYEEAMDFVSKIKELDIS 808



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/407 (22%), Positives = 189/407 (46%), Gaps = 4/407 (0%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           +V  L R+ +      L   +  +    D   +  ++++ + +G    A+ +F KMK+ G
Sbjct: 186 MVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEIG 245

Query: 95  CKPTTSTYNTLIKGYGNVGKP-EESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
             PT  TYN ++  YG +G+  +  L+LL  M + K ++ ++ T + ++ A   +  ++E
Sbjct: 246 LDPTLVTYNVMLDVYGKMGRSWDRILELLDEM-RSKGLELDEFTCSTVISACGREGMLDE 304

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A   + ++  +G +P  VTYN++ + + + G    A  +L EM++N   P+  T   + +
Sbjct: 305 ARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAA 364

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
            Y + G +++ M  +  M    V PN + + ++I  +      D   +  +LM++ G  P
Sbjct: 365 TYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAP 424

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           +V T+++++             ++  +M   G  P+   ++ +       G+      +L
Sbjct: 425 NVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVL 484

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M+  G  P+   F T+IS +        +  +Y +M + G  P + TY  LL      
Sbjct: 485 REMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAR- 543

Query: 394 KQPWR-AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           +  W+ AE ++Q M  KG +P +++  L+   +   G  +  ++V K
Sbjct: 544 RGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEK 590



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 71/138 (51%), Gaps = 6/138 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M++ V +G+  +A  +   +   G  P +++Y T++    R+   +  + ++S++   G+
Sbjct: 678 MDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGI 737

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL- 119
           +P  + +N  ++  +     DEA ++ + M +  C+P+  TY  L+ GY   GK EE++ 
Sbjct: 738 QPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAMD 797

Query: 120 -----KLLQLMSQDKNVK 132
                K L +   D++VK
Sbjct: 798 FVSKIKELDISFDDQSVK 815


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 236/455 (51%), Gaps = 19/455 (4%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F  ++  G  P + TY  ++  +  Q   +  L  + K+EK+G+ P+ + +N +I
Sbjct: 190 DAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLI 249

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +A  +   V EAM + + M   G      +YN++I G    G+  E  +L++ M + K +
Sbjct: 250 DASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEM-RGKGL 308

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P++ TYN LV  +C + ++ +   ++ +MV  G+ P+ VTY TL     + G   RA +
Sbjct: 309 VPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVE 368

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  +M+   +RPNERT   ++ G+C++G M +A + L  M      P++V +N+L+ G+ 
Sbjct: 369 IFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYC 428

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
            +         L  M E G+ PDVV++ST++  +     +GK  ++ ++MV+ G+ PD  
Sbjct: 429 FLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTV 488

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            +S L +G     +  +A  +   M + G+ P+ V +T++I+ +C   ++ +A+ ++++M
Sbjct: 489 TYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEM 548

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEE-LLQVMEEKGVRPKKSTIQLVADS-----W 425
            + G  P+  TY  L+ G  +  +   A+  LL++  E+ V P   T   + ++     +
Sbjct: 549 VQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESV-PDDVTYNTLIENCSNNEF 607

Query: 426 RAI----------GLAREAKRVLKSAEEDRQSMPN 450
           +++          GL  EA RV K+  + R   PN
Sbjct: 608 KSVEGLVKGFCMKGLMNEADRVFKTMLQ-RNHKPN 641



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 202/421 (47%), Gaps = 6/421 (1%)

Query: 23  EGHRPTLITYTTLVAALTRQ-----KRFKSILSLISKVEKDGMKPDSILFNAMINACSES 77
            G  PT+++Y  ++ AL R+     + +     +   + ++G+ P+   +N +I      
Sbjct: 161 HGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQ 220

Query: 78  GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT 137
           G++++ +   +KM+  G  P   TYNTLI       K +E++ LL+ M+    V  N  +
Sbjct: 221 GDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVG-GVAANLIS 279

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           YN ++   C K  + E   +V +M   G+ PD VTYNTL   + + G  ++   +L EM 
Sbjct: 280 YNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMV 339

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
              + PN  T   +++  CK GN+  A+    +M+   + PN   + +LI GF      +
Sbjct: 340 GKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMN 399

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
              K L+ M   G  P VVT++ ++  +   G + +   I   MV+ G+ PD+  +S + 
Sbjct: 400 EAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVI 459

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            G+ R  E  KA  +   M + GV P+ V ++++I G C   K+  A  ++ +M   G+ 
Sbjct: 460 AGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLP 519

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           P+  TY +L+  Y    +  +A  L   M ++G  P   T  ++ +        + AKR+
Sbjct: 520 PDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRL 579

Query: 438 L 438
           L
Sbjct: 580 L 580



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 115/478 (24%), Positives = 215/478 (44%), Gaps = 18/478 (3%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           K K  EA  +   +   G    LI+Y +++  L  + R   +  L+ ++   G+ PD + 
Sbjct: 255 KKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVT 314

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N ++N   + GN+ + + +  +M   G  P   TY TLI      G    ++++   M 
Sbjct: 315 YNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQM- 373

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + + ++PN+RTY  L+  +C K  + EA+ V+ +M+ SG  P  VTYN L   Y   G  
Sbjct: 374 RVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRV 433

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A  +L  M    + P+  +   +++G+C+E  +  A +    M E  V P+ V ++SL
Sbjct: 434 QEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSL 493

Query: 247 IKGF-LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           I+G  L  K  +  D    +M   G+ PD VT++++++A+   G + K   + D+MV+ G
Sbjct: 494 IQGLCLQQKLVEAFDLFREMMRR-GLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRG 552

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS------------ 353
             PD   +S+L  G  +    + A+ +L  +      P+ V + T+I             
Sbjct: 553 FLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEG 612

Query: 354 ---GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
              G+C    M  A  +++ M +    PN   Y  ++ G+       +A  L   +E   
Sbjct: 613 LVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSS 672

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSA 468
                  +  +  +    G+  E  R+L++     +    K  ++ VE   ++ N+ A
Sbjct: 673 FACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDA 730



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 194/414 (46%), Gaps = 41/414 (9%)

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTT------------------------ 99
           S +F+ ++ + S  G V +A+ +       G  PT                         
Sbjct: 132 SAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDA 191

Query: 100 ----------------STYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
                            TYN +I+G  + G  E+ L  ++ M ++  + PN  TYN L+ 
Sbjct: 192 ERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKE-GISPNVVTYNTLID 250

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           A C K  ++EA  ++  M   G+  + ++YN++       G      +++ EM+   + P
Sbjct: 251 ASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVP 310

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +E T   +V+G+CKEGN+   +  L  M    + PN+V + +LI       +     +  
Sbjct: 311 DEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIF 370

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M   G++P+  T++T++D +   GLM +  ++  +M+ +G  P +  ++ L  GY   
Sbjct: 371 DQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFL 430

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G  Q+A  IL  M + G+ P+VV ++TVI+G+C   ++ +A  + E+M E G+ P+  TY
Sbjct: 431 GRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTY 490

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
            +L+ G    ++   A +L + M  +G+ P + T   + +++   G   +A R+
Sbjct: 491 SSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRL 544



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 178/390 (45%), Gaps = 24/390 (6%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L GKG+  E   +   +  +G  P  +TY TLV    ++      L L+S++   G+
Sbjct: 284 INGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGL 343

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +  +IN   ++GN+  A++IF +M+  G +P   TY TLI G+   G   E+ K
Sbjct: 344 SPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYK 403

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M       P+  TYN LV  +C    ++EA  ++  MV  G+ PD V+Y+T+   +
Sbjct: 404 VLSEMIVS-GFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGF 462

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  E  +A QM  EM    V P+  T   ++ G C +  + +A      M    + P+ 
Sbjct: 463 CRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDE 522

Query: 241 VVFNSLIKGFLDIKDSDG-VDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           V + SLI  +      DG + KAL L +E    G  PD VT+S +++  +        + 
Sbjct: 523 VTYTSLINAYC----VDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKR 578

Query: 297 IFDDMVKAGIEPDIHVFSI---------------LAKGYVRAGEPQKAESILTSMRKYGV 341
           +   +      PD   ++                L KG+   G   +A+ +  +M +   
Sbjct: 579 LLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNH 638

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            PN  ++  +I G      + +A ++Y ++
Sbjct: 639 KPNAAIYNLMIHGHSRGGNVHKAYNLYMEL 668



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 106/243 (43%), Gaps = 16/243 (6%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +F  ++  G  P  +TYT+L+ A          L L  ++ + G  PD++ ++ +I
Sbjct: 505 EAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLI 564

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLI---------------KGYGNVGKPE 116
           N  ++      A ++  K+      P   TYNTLI               KG+   G   
Sbjct: 565 NGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMN 624

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           E+ ++ + M Q +N KPN   YN+++       ++ +A+N+  ++  S      V    L
Sbjct: 625 EADRVFKTMLQ-RNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIAL 683

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
            +A A+ G      ++L  +  +    + +   ++V    KEGNM+  +  L  M +  +
Sbjct: 684 VKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGL 743

Query: 237 HPN 239
            P+
Sbjct: 744 LPD 746


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 213/419 (50%), Gaps = 2/419 (0%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
            +A+ + + +I  G +P +  Y TL+ A  ++ R++  + L+  +  +G+ PD   +N +
Sbjct: 468 QKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCL 527

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           I     +  V+EA  +   M + G KP   TY   I  Y   G+ + + +  + M     
Sbjct: 528 IIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDM-LSSG 586

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           + PN+  Y IL++  C   +  EA +    M+  G+ PD   Y+ +  + ++ G+T  A 
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            +  +     V P+      ++SG+CKEG++E A +    M    ++PN+VV+N+LI G 
Sbjct: 647 GVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGL 706

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
             + +     +    +EE  + PDVVT+STI+D +  +G + +  ++FD+M+  GI PD 
Sbjct: 707 CKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDG 766

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
           +++ IL  G  + G  +KA S+    ++  V  ++  F ++I  +C   K+  A  +++ 
Sbjct: 767 YIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDD 825

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           M +  + PN+ TY  L+  YG+A+    AE+L   ME + + P   T   +  S+  IG
Sbjct: 826 MVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIG 884



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/470 (25%), Positives = 227/470 (48%), Gaps = 43/470 (9%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +  EA  IF  +   G  P   TYT L+    ++   +  L +  ++   G+K + + +N
Sbjct: 326 RSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYN 385

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           AMI   +++G + +AM +F +M  +G +P T TYN LI GY       ++ +LL  M   
Sbjct: 386 AMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKAR 445

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG---- 184
           K + P+  TY++L+   C  + +++A  V+ +M+ +G++P+   Y TL +AY Q      
Sbjct: 446 K-LTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEM 504

Query: 185 -------------------------------ETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
                                          +   A+ +L +M    ++PN  T G  ++
Sbjct: 505 AIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFIN 564

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
            Y K G ++ A R+   M    + PN V++  LIKG  D+ ++         M E G+ P
Sbjct: 565 LYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIP 624

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           D+  +S I+ + S  G   +   +F   +K G+ PD+ +++ L  G+ + G+ +KA  + 
Sbjct: 625 DIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLY 684

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M   G++PN+V++ T+I+G C   ++ +A  +++++ E  + P++ TY T++ GY ++
Sbjct: 685 DEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKS 744

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSW-------RAIGLAREAKR 436
                A +L   M  KG+ P      ++ D         +A+ L  EA++
Sbjct: 745 GNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQ 794



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 220/470 (46%), Gaps = 36/470 (7%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA  +   ++E+G  P   TYT LV    +QKR K    +   +   G+ P+
Sbjct: 286 LCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPN 345

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              + A+I+   + GN++EA++I  +M   G K    TYN +I G    G+  +++ L  
Sbjct: 346 RFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFN 405

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M     ++P+  TYN+L+  +   + + +A  ++ +M A  + P   TY+ L       
Sbjct: 406 EMLM-AGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHS 464

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +  +A ++L +M  N V+PN    G ++  Y +E   E A+  L  M    V P+L  +
Sbjct: 465 SDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCY 524

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N LI G    K  +     L  M E G+KP+  T+   ++ +S +G +   +  F DM+ 
Sbjct: 525 NCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLS 584

Query: 304 AGIEPDIHVFSILAKGY------------------------VRA-----------GEPQK 328
           +GI P+  +++IL KG+                        +RA           G+ ++
Sbjct: 585 SGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKE 644

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  +     K GV P+V ++ ++ISG+C    +++A  +Y++M   GINPN+  Y TL+ 
Sbjct: 645 AMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLIN 704

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           G  +  +  +A EL   +EEK + P   T   + D +   G   EA ++ 
Sbjct: 705 GLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLF 754



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 200/423 (47%), Gaps = 2/423 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           ++  ++E    P + TYT ++ A  +         ++S++EK+  KP+   +NA I    
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLC 287

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           ++G VDEA+++ + M + G  P   TY  L+ G+    + +E+  + + M     + PN 
Sbjct: 288 QTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPS-SGLNPNR 346

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY  L+  +  + +IEEA  +  +M+  G++ + VTYN +    A+ GE  +A  +  E
Sbjct: 347 FTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M    + P+  T  +++ GY K  +M  A   L  MK  ++ P+   ++ LI G     D
Sbjct: 407 MLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
               ++ L  M   GVKP+V  + T++ A+          E+   M+  G+ PD+  ++ 
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNC 526

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  G  RA + ++A+ +L  M + G+ PN   +   I+ +  + ++Q A   ++ M   G
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           I PN   Y  L+ G+ +      A    + M EKG+ P       +  S    G  +EA 
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646

Query: 436 RVL 438
            V 
Sbjct: 647 GVF 649



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 195/436 (44%), Gaps = 2/436 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G  +EA  +F   I EG  PTLI    L+  L +         +   + +  + PD   +
Sbjct: 186 GFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTY 245

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I A  + G+V +   +  +M+   CKP   TYN  I G    G  +E+L++ +LM  
Sbjct: 246 TNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLM-M 303

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +K + P+  TY +LV  +C +   +EA  +   M +SG+ P+  TY  L   + + G   
Sbjct: 304 EKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIE 363

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++  EM    ++ N  T   ++ G  K G M  AM     M    + P+   +N LI
Sbjct: 364 EALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLI 423

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G+L   D     + L  M+   + P   T+S ++     +  + K  E+ D M++ G++
Sbjct: 424 DGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVK 483

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P++ ++  L K YV+    + A  +L  M   GV P++  +  +I G C A K++ A  +
Sbjct: 484 PNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKML 543

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
              M E GI PN  TY   +  Y ++ +   AE   + M   G+ P      ++      
Sbjct: 544 LVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCD 603

Query: 428 IGLAREAKRVLKSAEE 443
           +G   EA    K   E
Sbjct: 604 VGNTVEALSTFKCMLE 619



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 208/499 (41%), Gaps = 84/499 (16%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +   +I  G  P L  Y  L+  L R K+ +    L+  + + G+KP++  + A IN  S
Sbjct: 508 LLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYS 567

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM---------- 125
           +SG +  A + F+ M  SG  P    Y  LIKG+ +VG   E+L   + M          
Sbjct: 568 KSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIR 627

Query: 126 -------SQDKN-----------------VKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
                  S  KN                 V P+   YN L+  +C +  IE+A  +  +M
Sbjct: 628 AYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEM 687

Query: 162 VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM 221
           + +GI P+ V YNTL     + GE  +A ++  E++   + P+  T   I+ GYCK GN+
Sbjct: 688 LHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNL 747

Query: 222 EDAMRFLYRMKELEVHPN----------------------------------LVVFNSLI 247
            +A +    M    + P+                                  L  FNSLI
Sbjct: 748 TEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLI 807

Query: 248 KGF------LDIKD--SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
             F      ++ ++   D VDK LT        P++VT++ ++DA+  A +M + +++F 
Sbjct: 808 DSFCKHGKVIEARELFDDMVDKKLT--------PNIVTYTILIDAYGKAEMMEEAEQLFL 859

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           DM    I P+   ++ L   Y + G   K  S+   M   G+  + + +  + S +C   
Sbjct: 860 DMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEG 919

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           K   A+ +  K    GI      ++ L++   + KQ     ELL  M ++ +     T  
Sbjct: 920 KSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCN 979

Query: 420 LVADSWRAIGLAREAKRVL 438
            +   +   G   EA +VL
Sbjct: 980 TLLLGFYKSGNEDEASKVL 998



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/406 (23%), Positives = 201/406 (49%), Gaps = 2/406 (0%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            G   EA   F C++E+G  P +  Y+ ++ +L++  + K  + +  K  K G+ PD  L+
Sbjct: 605  GNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLY 664

Query: 68   NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            N++I+   + G++++A +++ +M  +G  P    YNTLI G   +G+  ++ +L   + +
Sbjct: 665  NSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEI-E 723

Query: 128  DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            +K++ P+  TY+ ++  +C   ++ EA+ +  +M++ GI PD   Y  L     + G   
Sbjct: 724  EKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLE 783

Query: 188  RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            +A  +  E Q   V        +I S +CK G + +A      M + ++ PN+V +  LI
Sbjct: 784  KALSLFHEAQQKSVGSLSAFNSLIDS-FCKHGKVIEARELFDDMVDKKLTPNIVTYTILI 842

Query: 248  KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
              +   +  +  ++    ME   + P+ +T+++++ +++  G   K   +F DM   GI 
Sbjct: 843  DAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIA 902

Query: 308  PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
             D   + ++A  Y + G+  +A  +L      G+     +F  +I   C   ++   + +
Sbjct: 903  CDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLEL 962

Query: 368  YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
              +M +  ++ + KT  TLL G+ ++     A ++L VM+  G  P
Sbjct: 963  LSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVP 1008



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 125/283 (44%), Gaps = 38/283 (13%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            G   EA  +F+ +I +G  P    Y  L+    ++   +  LSL  + ++  +   S  F
Sbjct: 745  GNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSA-F 803

Query: 68   NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            N++I++  + G V EA ++F  M D    P   TY  LI  YG     EE+ +L   M +
Sbjct: 804  NSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDM-E 862

Query: 128  DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
             +N+ PN  TY  L+ ++    +  +  ++   M A GI  DA+ Y  +A AY + G++ 
Sbjct: 863  TRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSL 922

Query: 188  RAE-----------------------------------QMLFEMQNNQVRPNERTCGIIV 212
             A                                    ++L EM   ++  + +TC  ++
Sbjct: 923  EALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLL 982

Query: 213  SGYCKEGNMEDAMRFLYRMKELEVHP-NLVVFNSLIKGFLDIK 254
             G+ K GN ++A + L  M+ L   P +L + +S+  G  D+K
Sbjct: 983  LGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSISTGRDDMK 1025



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 8/185 (4%)

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
           +D  +    EFG   ++  F   +D +   G + +   +F   +  G  P +   + L +
Sbjct: 157 LDSLVRCYREFG-GSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMR 215

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC---NAVKMQRAMSIYEKMCEIG 375
             ++A        +  SM +  + P+V  +T VI   C   + +K +  +S  EK C+  
Sbjct: 216 DLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECK-- 273

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
             PNL TY   + G  +      A E+ ++M EKG+ P   T  L+ D +     ++EAK
Sbjct: 274 --PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAK 331

Query: 436 RVLKS 440
            + +S
Sbjct: 332 LIFES 336



 Score = 42.4 bits (98), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 49/93 (52%)

Query: 7    KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
            +GK  EA  + N  + EG +     +  L+  L ++K+  ++L L+S++ K+ +   S  
Sbjct: 918  EGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKT 977

Query: 67   FNAMINACSESGNVDEAMKIFQKMKDSGCKPTT 99
             N ++    +SGN DEA K+   M+  G  PT+
Sbjct: 978  CNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTS 1010


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 209/408 (51%), Gaps = 1/408 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  KG+ H+A    + ++  G     ++Y TL+  L +  +  + L L+ +V+   ++P+
Sbjct: 152 LCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPN 211

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++N +I++  +   V+EA  ++ +M   G  P   TYN LI G+  VGK +++  L  
Sbjct: 212 VVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFN 271

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  + N+ PN  T+NILV  +C +  ++EA NV+  M+  GI+PD  TYN+L   Y   
Sbjct: 272 KMIFE-NINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLV 330

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E  +A+ +   +    V PN  +  I++ G+CK   +++AM     M    + P++V +
Sbjct: 331 KEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTY 390

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           NSLI G   +       K +  M + GV  D +T+++I+DA      + K   +   M  
Sbjct: 391 NSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKD 450

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GI+PDI  ++ L  G  + G  + A  +   +   G   +V ++T +I G+C+      
Sbjct: 451 EGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDE 510

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           ++ +  KM E G  PN  TYE ++    +  +  +AE+LL+ M  +G+
Sbjct: 511 SLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 212/428 (49%), Gaps = 10/428 (2%)

Query: 17  FNCLIEEGH-RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           FN L+ + + +P++  +  ++ +L +   + +++SL  ++E +G+  D ++ + +IN  S
Sbjct: 59  FNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFS 118

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV---- 131
           + G    +  +  K+   G +P   T  TLIKG    G+  ++L+       DK V    
Sbjct: 119 QLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQF-----HDKVVALGF 173

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
             N  +Y  L+   C       A  ++ ++    +QP+ V YNT+  +  +      A  
Sbjct: 174 HLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFD 233

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  EM +  + P+  T   ++SG+C  G M+DA     +M    ++PN+  FN L+ GF 
Sbjct: 234 LYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFC 293

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
             +        L +M + G+KPDV T++++MD +     + K + IF+ + + G+ P+IH
Sbjct: 294 KERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIH 353

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            +SI+  G+ +  +  +A ++   M    + P+VV + ++I G C   K+  A+ + ++M
Sbjct: 354 SYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEM 413

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
            + G+  +  TY ++L    +  Q  +A  LL  M+++G++P   T   + D     G  
Sbjct: 414 HDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRL 473

Query: 432 REAKRVLK 439
            +A+ V +
Sbjct: 474 EDARIVFE 481



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/328 (22%), Positives = 149/328 (45%), Gaps = 37/328 (11%)

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           +L+ Q KN KP+   +  ++ +    N      ++  +M  +GI  D V  + L   ++Q
Sbjct: 61  RLLHQ-KNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQ 119

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+   +  +L ++      PN  T   ++ G C +G +  A++F  ++  L  H N V 
Sbjct: 120 LGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVS 179

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           + +LI G   +  +    + L  ++   V+P+VV ++TI+D+     L+ +  +++ +MV
Sbjct: 180 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 239

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             GI                                    P+VV +  +ISG+C   KM+
Sbjct: 240 SKGIS-----------------------------------PDVVTYNALISGFCIVGKMK 264

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A  ++ KM    INPN+ T+  L+ G+ + ++   A+ +L +M ++G++P   T   + 
Sbjct: 265 DATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLM 324

Query: 423 DSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           D +  +    +AK +  +  + R   PN
Sbjct: 325 DRYCLVKEVNKAKHIFNTISQ-RGVNPN 351


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 203/414 (49%), Gaps = 6/414 (1%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NIL+     KG+  EA+ ++  ++  G  P++ TY +L+ A  ++ + K  + L   + +
Sbjct: 47  NILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAE 106

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMK-IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
            G +PD + ++ +I+   ++G V EA++ +F KM + GC   T  YN LI G       E
Sbjct: 107 KGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIE 166

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
            + KLL+ M+  K   P++ TYN ++   C    + EA      M + G  PD V YN L
Sbjct: 167 RAYKLLEEMAS-KGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGL 225

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
             A  + G+T  A ++  ++      P+  T   I+ G  ++ NM++A     +M     
Sbjct: 226 LDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGC 285

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            PN   ++ ++ G    K  D   K L  M + G  PDVVT++ ++D      L+ K  E
Sbjct: 286 APNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHE 345

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F  MV  G  PDI  +S++  G  +  +   A  +   M +  + P+VV F  ++ G C
Sbjct: 346 LFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLC 405

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
            A K+  A  + ++M   G  P+   Y TL+ G  +  +  +A+ L Q M+EKG
Sbjct: 406 KAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 459



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 209/417 (50%), Gaps = 10/417 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   T+  ++ +  +Q + +    L  ++  +G+ PD I +N +I+  ++ G VDEA ++
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           +++M   G +P+  TYN+L+  +    K +E+++L + M++ K  +P+  TY+ ++   C
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAE-KGFEPDVVTYSTIISGLC 124

Query: 147 SKNSIEEAWNVVY-KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
               + EA  +++ KM+  G   + V YN L     +     RA ++L EM +    P+ 
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG-VDKALT 264
            T   I+SG C+ G + +A +F   M      P++V +N    G LD    +G  D+A+ 
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYN----GLLDALYKEGKTDEAMK 240

Query: 265 LMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           L ++    G  PD VT+++I+   +    M + +E+F  MV +G  P+   +SI+  G+ 
Sbjct: 241 LFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHC 300

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           RA +   A  +L  M K G  P+VV +  ++ G C    + +A  ++  M + G  P++ 
Sbjct: 301 RAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIV 360

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           +Y  +L G  +  +   A  L   M E+ + P   T  ++ D     G   EAK +L
Sbjct: 361 SYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 417



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/437 (24%), Positives = 209/437 (47%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  + + +F  +++ G  P  I Y  L+    ++ R      L  ++   G++P    
Sbjct: 21  QGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYT 80

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N+++NA  +   + EAM++F+ M + G +P   TY+T+I G    GK  E+L++L    
Sbjct: 81  YNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKM 140

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            ++    N   YN L+   C   +IE A+ ++ +M + G  PD +TYNT+     + G+ 
Sbjct: 141 IERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKV 200

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+Q    M +    P+      ++    KEG  ++AM+    +      P+ V +NS+
Sbjct: 201 SEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSI 260

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + G     + D  ++    M   G  P+  T+S ++     A  +    ++ ++M K G 
Sbjct: 261 LLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGA 320

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD+  ++IL  G  +     KA  + ++M   G  P++V ++ V++G C   K+  A  
Sbjct: 321 VPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARV 380

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           ++++M E  + P++ T+  L+ G  +A +   A++LL  M   G  P       + +  R
Sbjct: 381 LFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLR 440

Query: 427 AIGLAREAKRVLKSAEE 443
             G   +A R+ ++ +E
Sbjct: 441 KQGRHIQADRLTQAMKE 457



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 182/356 (51%), Gaps = 2/356 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILS-LISKVEKDG 59
           +N    + K  EA  +F  + E+G  P ++TY+T+++ L +  +    L  L  K+ + G
Sbjct: 85  LNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERG 144

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
              +++ +NA+IN   +  N++ A K+ ++M   G  P   TYNT++ G   +GK  E+ 
Sbjct: 145 CSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAK 204

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +    M   +   P+   YN L+ A   +   +EA  +   ++A G  PD VTYN++   
Sbjct: 205 QFFDSMPS-RGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLG 263

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
            A+      AE+M  +M  +   PN  T  I++SG+C+   ++DA + L  M ++   P+
Sbjct: 264 LARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPD 323

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +V +N L+ G       D   +  + M + G  PD+V++S +++       +   + +FD
Sbjct: 324 VVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFD 383

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
            M++  + PD+  F+IL  G  +AG+  +A+ +L  M   G  P+ V + T+++G 
Sbjct: 384 RMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGL 439



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/348 (22%), Positives = 155/348 (44%), Gaps = 36/348 (10%)

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           +   PN  T+ ++++++C +  + + + +  +M+ +GI PD + YN L   YA+ G    
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A ++  EM +  + P+  T   +++ +CKE  M++AM     M E    P++V ++++I 
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 249 GFLD---------------------------------IKDSDGVDKALTLMEEFGVK--- 272
           G                                    +   + +++A  L+EE   K   
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           PD +T++TI+      G + + ++ FD M   G  PD+  ++ L     + G+  +A  +
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              +   G  P+ V + +++ G      M  A  +++KM   G  PN  TY  +L G+  
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
           AK+   A ++L+ M + G  P   T  ++ D      L  +A  +  +
Sbjct: 302 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFST 349



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 1/233 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +GK  EA  +F  +I +G+ P  +TY +++  L R+        +  K+   G 
Sbjct: 226 LDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGC 285

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   ++ +++    +  VD+A K+ ++M   G  P   TYN L+ G       +++ +
Sbjct: 286 APNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHE 345

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M  D    P+  +Y++++   C  N + +A  +  +M+   + PD VT+N L    
Sbjct: 346 LFSTMV-DNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGL 404

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
            + G+   A+ +L +M  +   P+      +++G  K+G    A R    MKE
Sbjct: 405 CKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKE 457



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 47/94 (50%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L    K H+A  +F+ +IE    P ++T+  L+  L +  +      L+ ++   G 
Sbjct: 366 LNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGC 425

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
            PD + +N ++N   + G   +A ++ Q MK+ G
Sbjct: 426 APDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 459



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 47/101 (46%)

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           PN   F  V+  +C   K++    ++E+M + GI+P+   Y  L+ GY +  +   A  L
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            + M   G+ P   T   + +++      +EA  + K+  E
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAE 106


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 208/420 (49%), Gaps = 8/420 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  I   L   G  P +ITY  L+    +       L ++   E+  + PD + +
Sbjct: 156 GKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVL---ERMSVAPDVVTY 212

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++ +  +SG + EAM++  +     C P   TY  LI+   N     +++KLL  M +
Sbjct: 213 NTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRK 272

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K  KP+  TYN+L+   C +  ++EA   +  M   G QP+ +T+N + R+    G   
Sbjct: 273 -KGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWM 331

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            AE++L +M      P+  T  I+++  C++  +  A+  L +M +    PN + +N L+
Sbjct: 332 DAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLL 391

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            GF   K  D   + L +M   G  PD+VT++T++ A    G      EI + +   G  
Sbjct: 392 HGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCS 451

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P +  ++ +  G  + G+ + A  +L  MR+ G+ P+++ ++T++ G     K+  A+ I
Sbjct: 452 PVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKI 511

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST----IQLVAD 423
           +  M  + I P+  TY  ++ G  +A+Q  RA + L  M EKG +P K+T    I+ +AD
Sbjct: 512 FHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIAD 571



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 196/404 (48%), Gaps = 4/404 (0%)

Query: 39  LTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPT 98
           L R    +  L  + ++   G  PD I   ++I     SG   +A +I + +++SG  P 
Sbjct: 117 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPD 176

Query: 99  TSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVV 158
             TYN LI GY   G+ +++L++L+ MS    V P+  TYN ++R+ C    ++EA  V+
Sbjct: 177 VITYNVLIGGYCKSGEIDKALQVLERMS----VAPDVVTYNTILRSLCDSGKLKEAMEVL 232

Query: 159 YKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
            + +     PD +TY  L  A        +A ++L EM+    +P+  T  ++++G CKE
Sbjct: 233 DRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKE 292

Query: 219 GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTF 278
           G +++A++FL  M      PN++  N +++           ++ L  M   G  P VVTF
Sbjct: 293 GRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTF 352

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           + +++      L+G+  ++ + M K G  P+   ++ L  G+ +  +  +A   L  M  
Sbjct: 353 NILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVS 412

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            G +P++V + T+++  C   K   A+ I  ++   G +P L TY T++ G  +  +   
Sbjct: 413 RGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEY 472

Query: 399 AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           A ELL+ M  KG++P   T   +       G   EA ++    E
Sbjct: 473 AAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDME 516



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 197/440 (44%), Gaps = 37/440 (8%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMK---------PDSIL---------------- 66
           +T L A  +R KR ++ +S +SK E  GM          P+  L                
Sbjct: 44  FTKLKATRSR-KRLENRVSAVSKSEASGMNGRLQQIVSTPNGDLNGIGMESSSPNGVNGS 102

Query: 67  -------FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
                   N  +     +G ++E +K  ++M   G  P      +LI+G+   GK  ++ 
Sbjct: 103 RSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKAT 162

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           ++++++     V P+  TYN+L+  +C    I++A  V+ +M    + PD VTYNT+ R+
Sbjct: 163 RIMEILENSGAV-PDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRS 218

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
               G+   A ++L      +  P+  T  I++   C +  +  AM+ L  M++    P+
Sbjct: 219 LCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPD 278

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +V +N LI G       D   K L  M  +G +P+V+T + I+ +  S G     + +  
Sbjct: 279 VVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLA 338

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           DM++ G  P +  F+IL     R     +A  +L  M K+G  PN + +  ++ G+C   
Sbjct: 339 DMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEK 398

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           KM RA+   E M   G  P++ TY TLL    +  +   A E+L  +  KG  P   T  
Sbjct: 399 KMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYN 458

Query: 420 LVADSWRAIGLAREAKRVLK 439
            V D    +G    A  +L+
Sbjct: 459 TVIDGLTKVGKTEYAAELLE 478



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 144/286 (50%), Gaps = 1/286 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  +G+  EA    N +   G +P +IT+  ++ ++    R+     L++ + + G 
Sbjct: 286 INGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGC 345

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + FN +IN       +  A+ + +KM   GC P + +YN L+ G+    K + +++
Sbjct: 346 SPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIE 405

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L++M   +   P+  TYN L+ A C     + A  ++ ++ + G  P  +TYNT+    
Sbjct: 406 YLEIMVS-RGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGL 464

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+T  A ++L EM+   ++P+  T   ++ G   EG +++A++  + M+ L + P+ 
Sbjct: 465 TKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSA 524

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
           V +N+++ G    + +      L  M E G KP   T++ +++  +
Sbjct: 525 VTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIA 570


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 218/411 (53%), Gaps = 7/411 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  KG+ H+A +  + ++  G     + Y TL+  L +  +  + L L+ +V+   ++P+
Sbjct: 136 LCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPN 195

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++N +I++  +   V+EA  ++ +M   G  P   TY+ LI G+  +GK  +++ L  
Sbjct: 196 VVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFN 255

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  ++ + P+  T++ILV  +C +  ++EA NV+  M+  GI+PD VTY +L   Y   
Sbjct: 256 KMISEE-INPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLV 314

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +  +A+ +   M    V  N ++  I+++G+CK   +++AM     M    + P++V +
Sbjct: 315 KQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTY 374

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           NSLI G      S  +  AL L++E    GV  D +T+++I+DA      + K   +   
Sbjct: 375 NSLIDGLCK---SGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTK 431

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   GI+PD++ ++IL  G  + G  + A++I   +   G +  V  +T +I G+C+   
Sbjct: 432 MKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDL 491

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
             +A+++  KM + G  PN KTYE ++    E  +   AE+LL+ M  +G+
Sbjct: 492 FDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 204/428 (47%), Gaps = 36/428 (8%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
           L+T+  L+   ++        S+ + + K G +P++I    +I      G + +A+    
Sbjct: 91  LVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHD 150

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
           K+   G       Y TLI G   VG+   +L+LL+ +   K V+PN   YN ++ + C  
Sbjct: 151 KVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRV-DGKLVQPNVVMYNTIIDSMCKV 209

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
             + EA+++  +MV+ GI PD VTY+ L   +   G+   A  +  +M + ++ P+  T 
Sbjct: 210 KLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTF 269

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD----------- 257
            I+V G+CKEG +++A   L  M +  + P++V + SL+ G+  +K  +           
Sbjct: 270 SILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQ 329

Query: 258 ---------------------GVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGK 293
                                 VD+A+ L +E   K   PDVVT+++++D    +G +  
Sbjct: 330 GGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISY 389

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
             ++ D+M   G+  D   ++ +     +  +  KA ++LT M+  G+ P++  +T +I 
Sbjct: 390 ALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILID 449

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G C   +++ A +I+E +   G N  + TY  ++ G+ +     +A  LL  ME+ G  P
Sbjct: 450 GLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIP 509

Query: 414 KKSTIQLV 421
              T +++
Sbjct: 510 NAKTYEII 517



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/427 (23%), Positives = 208/427 (48%), Gaps = 9/427 (2%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           FN ++     P +  +  ++ +L +   +++ +SL  ++E +G+  D + FN +IN  S+
Sbjct: 44  FNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQ 103

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV----K 132
            G+   +  +F  +   G +P   T  TLIKG    G+  ++L        DK V     
Sbjct: 104 LGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHF-----HDKVVALGFH 158

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
            N   Y  L+   C       A  ++ ++    +QP+ V YNT+  +  +      A  +
Sbjct: 159 LNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDL 218

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             EM +  + P+  T   ++SG+C  G + DA+    +M   E++P++  F+ L+ GF  
Sbjct: 219 YSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCK 278

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
                     L +M + G+KPDVVT+ ++MD +     + K + IF+ M + G+  ++  
Sbjct: 279 EGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQS 338

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++I+  G+ +  +  +A ++   M    + P+VV + ++I G C + K+  A+ + ++M 
Sbjct: 339 YNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMH 398

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
           + G+  +  TY ++L    +  Q  +A  LL  M+++G++P   T  ++ D     G  +
Sbjct: 399 DRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLK 458

Query: 433 EAKRVLK 439
           +A+ + +
Sbjct: 459 DAQNIFE 465


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 217/423 (51%), Gaps = 1/423 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +GK  +A  + + ++E G +P ++TY ++V  + R         ++ K+E+  +
Sbjct: 165 INGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNV 224

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K D   ++ +I++    G +D A+ +F++M+  G K +  TYN+L++G    GK  +   
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M   + + PN  T+N+L+  +  +  ++EA  +  +M+  GI P+ +TYNTL   Y
Sbjct: 285 LLKDMVS-REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGY 343

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                   A  ML  M  N+  P+  T   ++ GYC    ++D M+    + +  +  N 
Sbjct: 344 CMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA 403

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V ++ L++GF         ++    M   GV PDV+T+  ++D     G + K  EIF+D
Sbjct: 404 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 463

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           + K+ ++  I +++ + +G  + G+ + A ++  S+   GV PNV+ +T +ISG C    
Sbjct: 464 LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 523

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  +  KM E G  PN  TY TL+  +        + +L++ M+  G     S+I++
Sbjct: 524 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKM 583

Query: 421 VAD 423
           V D
Sbjct: 584 VID 586



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 212/426 (49%), Gaps = 2/426 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A+ +   +++ G+ P   T+ TL+  L  + +    + L+ ++ ++G +PD + +N+++N
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVN 201

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
               SG+   A  + +KM++   K    TY+T+I      G  + ++ L + M + K +K
Sbjct: 202 GICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETKGIK 260

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
            +  TYN LVR  C      +   ++  MV+  I P+ +T+N L   + + G+   A ++
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             EM    + PN  T   ++ GYC +  + +A   L  M   +  P++V F SLIKG+  
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +K  D   K    + + G+  + VT+S ++  +  +G +   +E+F +MV  G+ PD+  
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           + IL  G    G+ +KA  I   ++K  +   +VM+TT+I G C   K++ A +++  + 
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ-LVADSWRAIGLA 431
             G+ PN+ TY  ++ G  +      A  LL+ MEE G  P   T   L+    R   L 
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560

Query: 432 REAKRV 437
             AK +
Sbjct: 561 ASAKLI 566



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/496 (23%), Positives = 237/496 (47%), Gaps = 36/496 (7%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSIL------------------- 49
           K  +A  +F  +I     P L+ ++   +A+ R K+F  +L                   
Sbjct: 68  KKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 50  ----------------SLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS 93
                           S++ KV K G +PD+  FN +IN     G V +A+ +  +M ++
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVEN 187

Query: 94  GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
           GC+P   TYN+++ G    G    +  +L+ M +++NVK +  TY+ ++ + C    I+ 
Sbjct: 188 GCQPDMVTYNSIVNGICRSGDTSLAFDMLRKM-EERNVKADVFTYSTIIDSLCRDGCIDA 246

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A ++  +M   GI+   VTYN+L R   + G+      +L +M + ++ PN  T  +++ 
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
            + KEG +++A      M    + PN++ +N+L+ G+         +  L LM      P
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           D+VTF++++  +     +    ++F ++ K G+  +   +SIL +G+ ++G+ + AE + 
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M  +GV P+V+ +  ++ G C+  K+++A+ I+E + +  ++  +  Y T++ G  + 
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKD 453
            +   A  L   +  KGV+P   T  ++       G   EA  +L+  EED  +  +   
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546

Query: 454 EIAVESIHRKQNLSAS 469
              + +  R  +L+AS
Sbjct: 547 NTLIRAHLRDGDLTAS 562



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/464 (22%), Positives = 202/464 (43%), Gaps = 51/464 (10%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKD--GMKPDSILFNAMINACSESGNVDEA 83
           +P L+   TL     R     +I S +S  E+D   +   ++ F   + +       D+A
Sbjct: 18  QPHLLKTGTL-----RTDLLCTISSFLSSCERDFSSITNGNVCFRERLRSGIVDIKKDDA 72

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +FQ+M  S   P    ++          +    L   + +  +  +  N  T NI++ 
Sbjct: 73  IALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELN-GIAHNIYTLNIMIN 131

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +C       A++V+ K++  G +PD  T+NTL       G+  +A  ++  M  N  +P
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQP 191

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG-VDKA 262
           +  T   IV+G C+ G+   A   L +M+E  V  ++  ++++I         DG +D A
Sbjct: 192 DMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLC----RDGCIDAA 247

Query: 263 LTL---MEEFGVK-----------------------------------PDVVTFSTIMDA 284
           ++L   ME  G+K                                   P+V+TF+ ++D 
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           +   G + +  E++ +M+  GI P+I  ++ L  GY       +A ++L  M +    P+
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
           +V FT++I G+C   ++   M ++  + + G+  N  TY  L+ G+ ++ +   AEEL Q
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSM 448
            M   GV P   T  ++ D     G   +A  + +  ++ +  +
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 142/302 (47%), Gaps = 5/302 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++ V +GK  EA+ ++  +I  G  P +ITY TL+     Q R     +++  + ++  
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + F ++I        VD+ MK+F+ +   G      TY+ L++G+   GK + + +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L Q M     V P+  TY IL+   C    +E+A  +   +  S +    V Y T+    
Sbjct: 425 LFQEMVS-HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A  +   +    V+PN  T  +++SG CK+G++ +A   L +M+E    PN 
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +N+LI+  L   D     K +  M+  G   D  +   ++D      L G+  + F D
Sbjct: 544 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML----LSGELDKSFLD 599

Query: 301 MV 302
           M+
Sbjct: 600 ML 601


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 226/418 (54%), Gaps = 5/418 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G   +A+  ++ +++    P  +TY +++AAL++ +     + +++ +    + P+
Sbjct: 21  LFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVM----VMPN 76

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +N++++    SG  ++A+ IF+KM   G +P   TYN+L+      GK  E+ K+  
Sbjct: 77  CFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFD 136

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + + +KP+  TY  L+  + SK ++ E  +++  MV +G+Q D   +N L  AY + 
Sbjct: 137 SMVK-RGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQ 195

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +      +  +M+   + PN      ++ G CK G ++DAM    +M +  + PN+VV+
Sbjct: 196 EKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVY 255

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            SLI         +  ++ +  + + G+ P++V F+TI+D+    G + + +++FD +  
Sbjct: 256 TSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGH 315

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ PD+  +S L  GY  AG+   A  +LT M   G+ P+ V ++T+I+G+C   +M+ 
Sbjct: 316 IGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMED 375

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           A++++++M   G+NP++ TY  +L G    ++   A+EL   + E G + + ST  ++
Sbjct: 376 ALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNII 433



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 201/415 (48%), Gaps = 5/415 (1%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           PD + +N +I+   + G+VD+A   + +M D    P   TYN++I         + ++++
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           L +M     V PN  TYN ++  +CS    E+A  +  KM + GI+PD VTYN+L     
Sbjct: 69  LTVM-----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLC 123

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           + G+   A ++   M    ++P+  T G ++ GY  +G + +    L  M +  +  +  
Sbjct: 124 KNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHH 183

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
           VFN LI  +   +  D V    + M + G+ P+ V + T++D     G +      F+ M
Sbjct: 184 VFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQM 243

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           +  G+ P++ V++ L        + +KAE ++  +   G++PN+V F T++   C   ++
Sbjct: 244 IDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRV 303

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             +  +++ +  IG+NP++ TY TL+ GY  A +   A +LL  M   G++P   T   +
Sbjct: 304 IESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTL 363

Query: 422 ADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQI 476
            + +  I    +A  + K  E +  +       I +  + R +  +A+   + +I
Sbjct: 364 INGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARI 418



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 175/366 (47%), Gaps = 1/366 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   TY +++       + +  + +  K+  DG++PD + +N++++   ++G   EA KI
Sbjct: 75  PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKI 134

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F  M   G KP  +TY TL+ GY + G   E   LL LM Q+  ++ +   +NIL+ A+ 
Sbjct: 135 FDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQN-GMQLDHHVFNILICAYT 193

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            +  ++E   V  KM   G+ P+AV Y T+     + G    A     +M +  + PN  
Sbjct: 194 KQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVV 253

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               ++   C     E A   ++ + +  ++PN+V FN+++             K   L+
Sbjct: 254 VYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLL 313

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              GV PDV+T+ST++D +  AG M    ++   MV  G++PD   +S L  GY +    
Sbjct: 314 GHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRM 373

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           + A ++   M   GV+P+++ +  ++ G     +   A  +Y ++ E G    L TY  +
Sbjct: 374 EDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNII 433

Query: 387 LWGYGE 392
           L  + +
Sbjct: 434 LMDFAK 439



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 167/322 (51%), Gaps = 1/322 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   GK  EA  IF+ +++ G +P + TY TL+     +     +  L++ + ++GM
Sbjct: 119 MDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGM 178

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + D  +FN +I A ++   VDE + +F KM+  G  P    Y T+I G   +G+ ++++ 
Sbjct: 179 QLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAML 238

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             + M  DK + PN   Y  L+ A C+ +  E+A  ++++++  GI P+ V +NT+  + 
Sbjct: 239 NFEQMI-DKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSL 297

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    ++++   + +  V P+  T   ++ GYC  G M+ AM+ L  M  + + P+ 
Sbjct: 298 CKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDS 357

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +++LI G+  I   +        ME  GV PD++T++ I+            +E++  
Sbjct: 358 VTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYAR 417

Query: 301 MVKAGIEPDIHVFSILAKGYVR 322
           + ++G + ++  ++I+   + +
Sbjct: 418 ITESGTQLELSTYNIILMDFAK 439



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 159/314 (50%), Gaps = 4/314 (1%)

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M+ D    P+  +YN ++     +  +++A+   ++M+   + PDAVTYN++  A ++  
Sbjct: 1   MADDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQ 60

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
              RA ++L  M    V PN  T   I+ GYC  G  E A+    +M    + P++V +N
Sbjct: 61  AMDRAMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYN 116

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           SL+             K    M + G+KPD+ T+ T++  ++S G + +  ++   MV+ 
Sbjct: 117 SLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQN 176

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G++ D HVF+IL   Y +  +  +   + + MR+ G+ PN V + TVI G C   ++  A
Sbjct: 177 GMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDA 236

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           M  +E+M + G+ PN+  Y +L+       +  +AEEL+  + ++G+ P       + DS
Sbjct: 237 MLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDS 296

Query: 425 WRAIGLAREAKRVL 438
               G   E+K++ 
Sbjct: 297 LCKEGRVIESKKLF 310



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 113/214 (52%), Gaps = 1/214 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A   F  +I++G  P ++ YT+L+ AL    +++    LI ++   G+ P+ + F
Sbjct: 231 GRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFF 290

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++++  + G V E+ K+F  +   G  P   TY+TLI GY   GK + ++KLL  M  
Sbjct: 291 NTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVS 350

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              +KP+  TY+ L+  +C  N +E+A  +  +M ++G+ PD +TYN +     +   T 
Sbjct: 351 -VGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTA 409

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM 221
            A+++   +  +  +    T  II+  + K  ++
Sbjct: 410 AAKELYARITESGTQLELSTYNIILMDFAKTNSL 443


>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
          Length = 410

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 197/380 (51%), Gaps = 2/380 (0%)

Query: 46  KSILSLISKVEKDG-MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNT 104
           +S L+++++  K G    D     A++N C + G+V EA ++F +M   G  P   TY  
Sbjct: 19  RSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTA 78

Query: 105 LIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS 164
           L+ GY   G+ E+   L + M +   V+PN  TYN L+  WC     E A ++  +M   
Sbjct: 79  LMHGYFTHGQREKGFALFEEMRRG-GVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVR 137

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           GI  + V+YNTL     ++G+ + A ++L  M+    RP+  T  ++V GY K G M +A
Sbjct: 138 GIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNA 197

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
           + F  +MK     P+ V +N LI GF   +D    ++AL+ M+E G++P  VT++ ++D+
Sbjct: 198 LPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDS 257

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           ++    MGK  EI   M KAG+E D H + +L +     G  + A  +  SM + GV P+
Sbjct: 258 FARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPS 317

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
            V++  +I G+       +A+ +  +M + G+ PN  +Y   +    +  +   AE LL 
Sbjct: 318 NVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLD 377

Query: 405 VMEEKGVRPKKSTIQLVADS 424
            M   G++  +S  Q + D+
Sbjct: 378 DMVRAGLQTSESICQALLDA 397



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 173/392 (44%), Gaps = 40/392 (10%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA  +F+ +   G  P  +TYT L+       + +   +L  ++ + G++P+   +
Sbjct: 52  GDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTY 111

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I     +G  + A  +F +M   G      +YNTLI G    GK  ++ KLL +M +
Sbjct: 112 NCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMM-R 170

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            +  +P+  T+N+LV  +     +  A     +M A+G QP AVTYN L   + +  +  
Sbjct: 171 TEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMT 230

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           RA + L +M+   + P + T  I++  + +E +M  A   L                   
Sbjct: 231 RANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEIL------------------- 271

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
                     G++KA       G++ D  T+  ++ A    G M   +++F  M + G+E
Sbjct: 272 ---------AGMEKA-------GLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVE 315

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P   ++ ++  GY R G   KA  ++  MR+ G+ PN   +   I   C   K Q A ++
Sbjct: 316 PSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEAL 375

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
            + M   G    L+T E++     +AK   R 
Sbjct: 376 LDDMVRAG----LQTSESICQALLDAKARLRG 403



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 146/343 (42%), Gaps = 9/343 (2%)

Query: 112 VGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAV 171
            G    +L +L   ++  +   +      LV   C    + EA  V  +M   G+ P+ V
Sbjct: 15  AGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEV 74

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
           TY  L   Y  +G+  +   +  EM+   V PN  T   ++  +C+ G  E A      M
Sbjct: 75  TYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEM 134

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
               +  N+V +N+LI G           K L +M   G +P ++TF+ ++D +  AG M
Sbjct: 135 PVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKM 194

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
                 F+ M  AG +P    +++L  G+ RA +  +A   L+ M++ G+ P  V +T +
Sbjct: 195 SNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTIL 254

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I  +     M +A  I   M + G+  +  TY  L+           A +L Q M EKGV
Sbjct: 255 IDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGV 314

Query: 412 RPKKSTIQLVADSWRAIGLAREAK--RVLKSAEEDRQS--MPN 450
            P      ++       G  RE    + LK   E RQ   +PN
Sbjct: 315 EPSNVIYDMM-----IYGYGREGSSYKALKLIMEMRQKGLIPN 352



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 135/306 (44%), Gaps = 7/306 (2%)

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT-LARAYAQYGETYRAEQMLFEMQNNQ 200
           VR  C+   +  A  ++ +   SG     VT  T L     + G+   A ++  EM    
Sbjct: 9   VRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLG 68

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           + PNE T   ++ GY   G  E        M+   V PNL  +N LI  +    +    +
Sbjct: 69  LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGE---FE 125

Query: 261 KALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
           +A +L +E    G+  +VV+++T++      G +    ++ D M   G  P I  F++L 
Sbjct: 126 RARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLV 185

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            GY +AG+   A      M+  G  P+ V +  +I+G+C A  M RA      M E G+ 
Sbjct: 186 DGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLE 245

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           P   TY  L+  +       +A E+L  ME+ G+     T  ++  +    G  ++A+++
Sbjct: 246 PTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKL 305

Query: 438 LKSAEE 443
            +S  E
Sbjct: 306 FQSMGE 311


>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 198/365 (54%), Gaps = 4/365 (1%)

Query: 33  TTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKD 92
           + +++ L R  + +  L + ++ +K G   +   ++AM++A   SG   EA+K+FQ MK 
Sbjct: 204 SIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKK 263

Query: 93  SGCKPTTSTYNTLIKGYGNVG-KPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
           +GCKP   TYNT+I   G  G   +++L +   M Q + V+P+  T+N L+ A CS+  +
Sbjct: 264 AGCKPNLITYNTIIDACGKGGVDLKQALDIFDEM-QKEGVEPDRITFNSLI-AVCSRGGL 321

Query: 152 -EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
            E++  V  +M   GI+ D  T+NTL  A  + G+   A  ++  M+   + PN  T   
Sbjct: 322 WEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYST 381

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++ GY K G  E+A+   + MKE  V P+ V +N+LI  +  +   D    A   ME  G
Sbjct: 382 MIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVG 441

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           +K DVVT++ ++DA+   G       +FD M   G+ P++  +S L   Y +AG  Q   
Sbjct: 442 LKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVS 501

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           ++ T  ++ G+ P+VV+++++I   C    ++ A+ + ++M + GI PN+ TY +L+  Y
Sbjct: 502 NVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAY 561

Query: 391 GEAKQ 395
           G   Q
Sbjct: 562 GRYGQ 566



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 201/387 (51%), Gaps = 8/387 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQK-RFKSILSLISKVEKDGMKPDSIL 66
           G+  EA  +F  + + G +P LITY T++ A  +     K  L +  +++K+G++PD I 
Sbjct: 249 GRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRIT 308

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           FN++I  CS  G  +++ ++F +M+  G +    T+NTLI      G+ E +  ++  M 
Sbjct: 309 FNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTM- 367

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + KN+ PN  TY+ ++  +      EEA ++ + M  SG++PD V+YNTL   YA+ G  
Sbjct: 368 RGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRF 427

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A     +M+   ++ +  T   ++  Y K+G  +DA     +MK   + PN++ +++L
Sbjct: 428 DDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSAL 487

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I  +        V    T  +  G+KPDVV +S+++D+    GL+     +  +M +AGI
Sbjct: 488 IDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGI 547

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSM----RKYGVHPNVVMFTTVIS--GWCNAVK 360
           +P+I  ++ L   Y R G+  K E++  +M    +K G     V+     S     +   
Sbjct: 548 QPNIVTYNSLIDAYGRYGQADKLEAVKANMPNSVQKIGERSMEVVRKPPPSQQNASDHTG 607

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLL 387
           +  A+S++ +M + G+ PN+ T+  +L
Sbjct: 608 VLAAVSVFHEMQQFGLKPNVVTFSAIL 634



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 151/338 (44%), Gaps = 2/338 (0%)

Query: 103 NTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV 162
           + +I   G +GK E +L +    +Q      N   Y+ +V A+       EA  V   M 
Sbjct: 204 SIMISTLGRLGKVEIALDVFN-RAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMK 262

Query: 163 ASGIQPDAVTYNTLARAYAQYG-ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM 221
            +G +P+ +TYNT+  A  + G +  +A  +  EMQ   V P+  T   +++   + G  
Sbjct: 263 KAGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLW 322

Query: 222 EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
           ED+ R    M+   +  ++  FN+LI         +     +T M    + P+VVT+ST+
Sbjct: 323 EDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTM 382

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +D +   G   +   ++ DM ++G+ PD   ++ L   Y + G    A      M + G+
Sbjct: 383 IDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGL 442

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
             +VV +  +I  +    K + A  +++KM   G+ PN+ TY  L+  Y +A        
Sbjct: 443 KADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSN 502

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           +    +  G++P       + DS    GL  +A  +L+
Sbjct: 503 VFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQ 540



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 160/343 (46%), Gaps = 10/343 (2%)

Query: 102 YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN-DRTYNILVRAWCSKNSIEEAWNVVYK 160
           +  L++  GN G+ E +L+  + M Q  +++    +  +I++        +E A +V  +
Sbjct: 166 FPYLLRELGNRGEWERALQGYEWMVQQVHLRSEWSKLASIMISTLGRLGKVEIALDVFNR 225

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEG- 219
              +G   +   Y+ +  AY + G    A ++   M+    +PN  T   I+    K G 
Sbjct: 226 AQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGV 285

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLI----KGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           +++ A+     M++  V P+ + FNSLI    +G L  +DS    +    M+  G++ D+
Sbjct: 286 DLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGL-WEDSQ---RVFAEMQRRGIEQDI 341

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
            TF+T++DA    G M     I   M    I P++  +S +  GY + G  ++A S+   
Sbjct: 342 FTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHD 401

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M++ GV P+ V + T+I  +    +   A+   + M  +G+  ++ TY  L+  YG+  +
Sbjct: 402 MKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGK 461

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
              A  L   M+ +G+ P   T   + DS+   G+ ++   V 
Sbjct: 462 YKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVF 504



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 130/274 (47%), Gaps = 5/274 (1%)

Query: 173 YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE---RTCGIIVSGYCKEGNMEDAMRFLY 229
           +  L R     GE  RA Q  +E    QV       +   I++S   + G +E A+    
Sbjct: 166 FPYLLRELGNRGEWERALQG-YEWMVQQVHLRSEWSKLASIMISTLGRLGKVEIALDVFN 224

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
           R ++     N+  +++++  +          K    M++ G KP+++T++TI+DA    G
Sbjct: 225 RAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGG 284

Query: 290 L-MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
           + + +  +IFD+M K G+EPD   F+ L     R G  + ++ +   M++ G+  ++  F
Sbjct: 285 VDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTF 344

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
            T+I   C   +M+ A SI   M    I+PN+ TY T++ GYG+      A  L   M+E
Sbjct: 345 NTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKE 404

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
            GVRP + +   + D +  +G   +A    K  E
Sbjct: 405 SGVRPDRVSYNTLIDIYAKLGRFDDALIACKDME 438



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 113/197 (57%), Gaps = 7/197 (3%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  +A  +F+ +  EG  P ++TY+ L+ + ++    + + ++ ++ ++ G+KPD +L
Sbjct: 459 QGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVL 518

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++++I++C + G V++A+ + Q+M  +G +P   TYN+LI  YG  G+ ++ L+ ++   
Sbjct: 519 YSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADK-LEAVKANM 577

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEE------AWNVVYKMVASGIQPDAVTYNTLARAY 180
            +   K  +R+  ++ +   S+ +  +      A +V ++M   G++P+ VT++ +  A 
Sbjct: 578 PNSVQKIGERSMEVVRKPPPSQQNASDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNAC 637

Query: 181 AQYGETYRAEQMLFEMQ 197
           ++      A  +L +M+
Sbjct: 638 SRCASLQEASVLLEQMR 654


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/533 (25%), Positives = 250/533 (46%), Gaps = 43/533 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MNILV  G   +AH ++  + + G  P + T+T  + +     R  + L L++ +   G 
Sbjct: 118 MNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGC 177

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + +++ + A+I+   +     EA  +F +M   G  P   T+N LI      G  +ES K
Sbjct: 178 EFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEK 237

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   + + + V PN  T+NI ++  C K +I+EA  ++  +V+ G+ PD ++YNTL   +
Sbjct: 238 LFSKVMK-RGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGF 296

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK----------------------- 217
            ++ +   AE  L +M N+ V PNE T   I++G+CK                       
Sbjct: 297 CKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDE 356

Query: 218 ------------EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
                       +G+M  AM   Y   E     +++++N+L+KG   +     V +AL L
Sbjct: 357 FTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKG---LSKQGLVLQALQL 413

Query: 266 ME---EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           M+   E G  PD+ T++ +++     G +     I +D +  G  PDI  F+ L  GY +
Sbjct: 414 MKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCK 473

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
                KA  IL +M  +G+ P+V+ + T+++G C A K+   +  ++ M E G  PN+ T
Sbjct: 474 QRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIIT 533

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           Y  L+  + + ++   A EL + M+ +G+ P   T+  +     + G   +A  +  + E
Sbjct: 534 YNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIE 593

Query: 443 EDRQ-SMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSEHNGSSAAKIRS 494
           ++ + S       I + +   K N+S +   F ++ G   +  N +    I S
Sbjct: 594 KEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDS 646



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/432 (24%), Positives = 208/432 (48%), Gaps = 6/432 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L  KG   E+  +F+ +++ G  P L T+   +  L R+        L+  +  +G+
Sbjct: 223 IHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGL 282

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I +N +I    +   + EA     KM +SG +P   TYNT+I G+   G  + + K
Sbjct: 283 TPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADK 342

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+  +  K   P++ TY+ L+   C+   +  A  V Y+ +  G +   + YNTL +  
Sbjct: 343 ILR-DAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGL 401

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++ G   +A Q++ +M  +   P+  T  ++V+G CK G + DA   L         P++
Sbjct: 402 SKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDI 461

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FN+LI G+   ++ D   + L  M   G+ PDV+T++T+++    A  +    + F  
Sbjct: 462 FTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKA 521

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M++ G  P+I  ++IL + + +  +  +A  +   M+  G+ P++V   T+I G C+  +
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581

Query: 361 MQRAMSIY---EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           + +A  ++   EK  E   + +   +  ++  +        AE+L   M      P   T
Sbjct: 582 LDKAYELFVTIEK--EYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYT 639

Query: 418 IQLVADSWRAIG 429
            +++ DS+   G
Sbjct: 640 YRVMIDSYCKTG 651



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/438 (24%), Positives = 212/438 (48%), Gaps = 11/438 (2%)

Query: 10  PHEAHYIFNCL-IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK--DGMKPDSIL 66
           P  A  +FN +  E+G + TL TY  ++  L    +F+++  +++++ K  D    + + 
Sbjct: 20  PLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVY 79

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
              M +     G V EA+ +F++M    C+P+  +YN ++      G   ++ K+   M 
Sbjct: 80  IGIMRDY-GRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM- 137

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +D  + P+  T+ I ++++C       A  ++  M   G + +AV+Y  +   + +    
Sbjct: 138 KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQ 197

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A  +  EM    + P+  T   ++   CK+GN++++ +   ++ +  V PNL  FN  
Sbjct: 198 IEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           I+G         +D+A  L+E     G+ PDV++++T++  +     + + +     MV 
Sbjct: 258 IQGLCR---KGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVN 314

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           +G+EP+   ++ +  G+ +AG  Q A+ IL      G  P+   ++++I+G CN   M R
Sbjct: 315 SGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNR 374

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           AM+++ +  E G   ++  Y TL+ G  +     +A +L++ M E G  P   T  LV +
Sbjct: 375 AMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVN 434

Query: 424 SWRAIGLAREAKRVLKSA 441
               +G   +A  +L  A
Sbjct: 435 GLCKMGCLSDANGILNDA 452



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 114/232 (49%), Gaps = 10/232 (4%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           I + ++  G  P +ITY TL+  L + ++  +++     + + G  P+ I +N +I +  
Sbjct: 483 ILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFC 542

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           +   V EAM++F++MK  G  P   T  TLI G  + G+ +++ +L   + ++     + 
Sbjct: 543 KDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYST 602

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
             +NI++ A+C K ++  A  + +KM  S   PD  TY  +  +Y + G    A   L E
Sbjct: 603 AIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLE 662

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
             +  + P+  TCG +++  C            +R+ E  V  NL+V N ++
Sbjct: 663 NISKGLVPSFTTCGKVLNCLC----------VTHRLSEAVVIINLMVQNGIV 704


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/494 (26%), Positives = 234/494 (47%), Gaps = 43/494 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G    +  +F  + E G  P ++TY +L+    +    + + SL ++++  G 
Sbjct: 237 IDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGC 296

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I +N +IN   +   +  A + F +MK++G KP   TY+TLI  +   G  + ++K
Sbjct: 297 VPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIK 356

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M +   + PN+ TY  L+ A C   ++ EAW ++  M+ +G++ + VTY  L    
Sbjct: 357 LLXDMRR-TGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGL 415

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    AE++   M  + + PN++    +V GY K   MEDAM+ L +M E  + P+L
Sbjct: 416 CKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDL 475

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +++ S+I G    +  +     L  M+  G+  + V  +TI+DA+  AG        F +
Sbjct: 476 ILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQE 535

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC--NA 358
           M   G+E  I  + +L  G   AG  + A      M   G+ PNV ++T++I G C  N 
Sbjct: 536 MQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNC 595

Query: 359 VK---------------------------------MQRAMSIYEKMCEIGINPNLKTYET 385
           ++                                 +Q A+ +  +M E+ I  +L  Y +
Sbjct: 596 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTS 655

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKS-TIQLVADSWR------AIGLAREAKRVL 438
           L+ G+ +  +  +A +    M EKG+ P++   I L+ + ++      AI L  E +R+ 
Sbjct: 656 LVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMA 715

Query: 439 KSAEEDRQSMPNKK 452
            S E D Q   N++
Sbjct: 716 YSFEFDAQLAYNEQ 729



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 188/378 (49%), Gaps = 1/378 (0%)

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
           +F+ + +   E G ++EA + F +M++    P   + N L+      G  +   K    M
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
                + P+  TYN+++   C +  +E +  +  +M   G+ PD VTYN+L   Y + G 
Sbjct: 222 I-GAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGS 280

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
                 +  EM++    P+  T   +++ YCK   M  A  +   MK   + PN+V +++
Sbjct: 281 LEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYST 340

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           LI  F       G  K L  M   G+ P+  T+++++DA   AG + +  ++ +DM++AG
Sbjct: 341 LIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 400

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           ++ +I  ++ L  G  +AG   +AE +  SM K G+ PN  ++T ++ G+  A +M+ AM
Sbjct: 401 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAM 460

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            I ++M E  I P+L  Y +++WG+   ++    + +L+ M+ +G+         + D++
Sbjct: 461 KILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAY 520

Query: 426 RAIGLAREAKRVLKSAEE 443
              G + +A    +  ++
Sbjct: 521 FKAGKSSDALNFFQEMQD 538



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 201/434 (46%), Gaps = 36/434 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            ++ V  G   EA+  F+ +      P   +   L+  L++    + +    + +   G+
Sbjct: 167 FSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGI 226

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P    +N MI+   + G+++ + ++F +M++ G  P   TYN+LI GYG VG  EE   
Sbjct: 227 APSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVAS 286

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M +D    P+  TYN L+  +C    +  A+    +M  +G++P+ VTY+TL  A+
Sbjct: 287 LFNEM-KDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAF 345

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A ++L +M+   + PNE T   ++   CK GN+ +A + L  M +  V  N+
Sbjct: 346 CKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNI 405

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V                                   T++ ++D    AG M + +E+F  
Sbjct: 406 V-----------------------------------TYTALLDGLCKAGRMIEAEEVFRS 430

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+K GI P+  V++ L  GY++A   + A  IL  M +  + P+++++ ++I G C+  K
Sbjct: 431 MLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRK 490

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           ++    I E+M   GI+ N     T++  Y +A +   A    Q M++ GV     T  +
Sbjct: 491 LEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCV 550

Query: 421 VADSWRAIGLAREA 434
           + D     G+   A
Sbjct: 551 LIDGLCEAGIVELA 564



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 131/281 (46%), Gaps = 1/281 (0%)

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
            ++ L   + + G    A +    M+N +  P  R+C  ++    K GN +   +F   M
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
               + P++  +N +I       D +   +    M E G+ PDVVT+++++D +   G +
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            +   +F++M   G  PDI  ++ L   Y +  +  +A    + M+  G+ PNVV ++T+
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 341

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I  +C    MQ A+ +   M   G+ PN  TY +L+    +A     A +LL  M + GV
Sbjct: 342 IDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 401

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK 452
           +    T   + D     G   EA+ V +S  +D  S PN++
Sbjct: 402 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGIS-PNQQ 441


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 222/437 (50%), Gaps = 1/437 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   EA  + + +  +G +P + TY  ++  L +  ++     ++ ++ K GM
Sbjct: 400 INAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGM 459

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD+  +N ++  C  + N+ +A +IF +M   G  P   +++ LI      G  +++LK
Sbjct: 460 SPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALK 519

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             + M ++  + P++  Y IL+  +C    + EA  V  +M+  G   D VTYNT+    
Sbjct: 520 YFRDM-KNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGL 578

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A+++  EM    V P+  T   +++GY K+GNM  A+     M +  + P++
Sbjct: 579 CKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDV 638

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+LI GF    + + V++    M    + P+ +++  +++ + + G + +   ++D+
Sbjct: 639 VTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDE 698

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ G E  I   + + KGY RAG   KA+  L++M   G+ P+ + + T+I+G+     
Sbjct: 699 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 758

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M RA ++  KM   G+ P++ TY  +L G+    +   AE ++  M E+GV P +ST   
Sbjct: 759 MDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTS 818

Query: 421 VADSWRAIGLAREAKRV 437
           + +        +EA RV
Sbjct: 819 LINGHVTQNNLKEAFRV 835



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 214/422 (50%), Gaps = 1/422 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV  G    A  I+  ++  G +  + T   ++ AL + ++ ++  S +S +E+ G+ PD
Sbjct: 333 LVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPD 392

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +INA    G ++EA ++   M   G KP   TYN +I G    GK   +  +L 
Sbjct: 393 VVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLD 452

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +   + P+  TYNIL+   C  +++ +A  +  +M + G+ PD V+++ L    ++ 
Sbjct: 453 EMLK-IGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKN 511

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G   +A +   +M+N  + P+     I++ G+C+ G M +A++    M E     ++V +
Sbjct: 512 GCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTY 571

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+++ G    K     D+  T M E GV PD  TF+T+++ +   G M K   +F+ M++
Sbjct: 572 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQ 631

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
             ++PD+  ++ L  G+ +  E +K   +   M    ++PN + +  +I+G+CN   +  
Sbjct: 632 RNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSE 691

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  ++++M E G    + T  T++ GY  A    +A+E L  M  KG+ P   T   + +
Sbjct: 692 AFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 751

Query: 424 SW 425
            +
Sbjct: 752 GF 753



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 195/370 (52%), Gaps = 1/370 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  IF+ +  +G  P L++++ L+  L++       L     ++  G+ PD++++  +I
Sbjct: 481 DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 540

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                +G + EA+K+  +M + GC     TYNT++ G        E+ +L   M++ + V
Sbjct: 541 GGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTE-RGV 599

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  T+  L+  +    ++ +A  +   M+   ++PD VTYNTL   + +  E  +  +
Sbjct: 600 FPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNE 659

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  +M + ++ PN  + GI+++GYC  G + +A R    M E      ++  N+++KG+ 
Sbjct: 660 LWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYC 719

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
              ++   D+ L+ M   G+ PD +T++T+++ +     M +   + + M  +G+ PD+ 
Sbjct: 720 RAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVI 779

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++++  G+ R G  Q+AE I+  M + GV+P+   +T++I+G      ++ A  ++++M
Sbjct: 780 TYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEM 839

Query: 372 CEIGINPNLK 381
            + G  P+ K
Sbjct: 840 LQRGFVPDDK 849



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 199/436 (45%), Gaps = 9/436 (2%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  E    F  L  +G   ++    +L+  L +         +  +V + G++ +    N
Sbjct: 303 KLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLN 362

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            MINA  ++  ++        M++ G  P   TYNTLI  Y   G  EE+ +L+  MS  
Sbjct: 363 IMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMS-G 421

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K +KP   TYN ++   C       A  V+ +M+  G+ PD  TYN L     +      
Sbjct: 422 KGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMD 481

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           AE++  EM +  V P+  +   ++    K G ++ A+++   MK   + P+ V++  LI 
Sbjct: 482 AERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG 541

Query: 249 GFLDIKDSDGV-DKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           GF      +GV  +AL + +E    G   DVVT++TI++      ++ +  E+F +M + 
Sbjct: 542 GFC----RNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTER 597

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+ PD + F+ L  GY + G   KA ++   M +  + P+VV + T+I G+C   +M++ 
Sbjct: 598 GVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKV 657

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             ++  M    I PN  +Y  L+ GY        A  L   M EKG      T   +   
Sbjct: 658 NELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 717

Query: 425 WRAIGLAREAKRVLKS 440
           +   G A +A   L +
Sbjct: 718 YCRAGNAVKADEFLSN 733



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/413 (23%), Positives = 172/413 (41%), Gaps = 57/413 (13%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-QLM 125
           F+AMI+    S  + +A  +  +M             +L+  YGN G       LL +  
Sbjct: 239 FSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTY 298

Query: 126 SQDKNVKPNDRTYNIL-------------------------------------------- 141
            Q + ++     + +L                                            
Sbjct: 299 VQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNV 358

Query: 142 ------VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
                 + A C    IE   + +  M   G+ PD VTYNTL  AY + G    A +++  
Sbjct: 359 YTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDS 418

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M    ++P   T   I++G CK G    A   L  M ++ + P+   +N L+   ++   
Sbjct: 419 MSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL---VECCR 475

Query: 256 SDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +D +  A  + +E    GV PD+V+FS ++   S  G + +  + F DM  AG+ PD  +
Sbjct: 476 NDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVI 535

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++IL  G+ R G   +A  +   M + G   +VV + T+++G C    +  A  ++ +M 
Sbjct: 536 YTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMT 595

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           E G+ P+  T+ TL+ GY +     +A  L ++M ++ ++P   T   + D +
Sbjct: 596 ERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGF 648



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 83/207 (40%), Gaps = 2/207 (0%)

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           + F  ++  +  A  + +  E F  +   G+   I+  + L  G V+ G    A  I   
Sbjct: 289 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 348

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           + + GV  NV     +I+  C   K++   S    M E G+ P++ TY TL+  Y     
Sbjct: 349 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 408

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEI 455
              A EL+  M  KG++P   T   + +     G    AK VL    +   S       I
Sbjct: 409 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 468

Query: 456 AVESIHRKQNLSASNSTFLQIP--GVV 480
            +    R  N+  +   F ++P  GVV
Sbjct: 469 LLVECCRNDNMMDAERIFDEMPSQGVV 495


>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 195/368 (52%), Gaps = 1/368 (0%)

Query: 49  LSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
             L++++E  G+ P+  ++  +I AC  +G++D+A  +F +M D G       Y  +I G
Sbjct: 127 FELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMING 186

Query: 109 YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP 168
           +   G  ++  +L Q M +   V PN  TYN L+  +C    +  A+ V  ++   G+  
Sbjct: 187 FFKKGYKKDGFELYQKM-KLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVAC 245

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           +AVTYN L     + G+  +AE +L  M+   + P  RT  +++ G C  G ++ A+ +L
Sbjct: 246 NAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYL 305

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
            ++K + + P LV +N LI GF  + +S  V + +  ME+ G+ P  VT++ +M+ +  +
Sbjct: 306 EKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRS 365

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
             + K  E+F  M + G+ PD H + +L  G    G   +A  +  SM +  + PN V++
Sbjct: 366 DDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIY 425

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
            T+I+G+C      +A+   E+M + G+ PN+ +Y + +    +  +   A+ LL+ M E
Sbjct: 426 NTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTE 485

Query: 409 KGVRPKKS 416
            G++P +S
Sbjct: 486 AGLKPPES 493



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 153/311 (49%), Gaps = 7/311 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    KG   +   ++  +   G  P L TY +L+    R  +      +  ++ K G+
Sbjct: 184 INGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGV 243

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             +++ +N +I      G V +A  + ++MK +   PTT T+N L+ G  N G+ +++L 
Sbjct: 244 ACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALS 303

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L+ + +   + P   TYNIL+  +    +      +V +M   GI P  VTY  L   +
Sbjct: 304 YLEKL-KLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTF 362

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +  +A +M   M+   + P++ T G+++ G C +GNM +A +    M E+ + PN 
Sbjct: 363 VRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPND 422

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V++N++I G+    +S    KAL  +EE    GV P+V ++ + +      G   + + +
Sbjct: 423 VIYNTMINGYCKECNS---YKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRL 479

Query: 298 FDDMVKAGIEP 308
             +M +AG++P
Sbjct: 480 LKEMTEAGLKP 490



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 154/311 (49%), Gaps = 4/311 (1%)

Query: 116 EESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
           E+SL   +LM   K   P+  ++N  +       +++  W    + +    Q D  ++  
Sbjct: 55  EQSLDSFKLMVL-KGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGR-TQFDVYSFGI 112

Query: 176 LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
             +A+ + G   +  ++L +M+   V PN     I++   C+ G+++ A     RM +L 
Sbjct: 113 TIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLG 172

Query: 236 VHPNLVVFNSLIKGFLDIK-DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
           +  N  ++  +I GF       DG +     M+  GV P++ T+++++  +   G +   
Sbjct: 173 LAANQYIYTIMINGFFKKGYKKDGFE-LYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLA 231

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
            ++FD++ K G+  +   ++IL  G  R G+  KAE +L  M++  ++P    F  ++ G
Sbjct: 232 FKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDG 291

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            CN  ++ +A+S  EK+  IG+ P L TY  L+ G+ +        EL++ ME++G+ P 
Sbjct: 292 LCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPS 351

Query: 415 KSTIQLVADSW 425
           K T  ++ +++
Sbjct: 352 KVTYTILMNTF 362



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/383 (23%), Positives = 177/383 (46%), Gaps = 16/383 (4%)

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNT---LIKGYGNV----GKPEESLK 120
           +A+INA  +S  +++++  F+ M   G  P++ ++N    L+   GN+    G   E L 
Sbjct: 42  DAVINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLG 101

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             Q          +  ++ I ++A+C   ++ + + ++ +M   G+ P+   Y  L  A 
Sbjct: 102 RTQF---------DVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEAC 152

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+  +A+ M   M +  +  N+    I+++G+ K+G  +D      +MK + V PNL
Sbjct: 153 CRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNL 212

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +NSLI  +          K    + + GV  + VT++ ++      G + K + + + 
Sbjct: 213 YTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLER 272

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M +A I P    F++L  G    G+  KA S L  ++  G+ P +V +  +ISG+     
Sbjct: 273 MKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGN 332

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
                 +  +M + GI+P+  TY  L+  +  +    +A E+  +M+  G+ P + T  +
Sbjct: 333 SSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGV 392

Query: 421 VADSWRAIGLAREAKRVLKSAEE 443
           +       G   EA ++ KS  E
Sbjct: 393 LIHGLCIKGNMVEASKLYKSMVE 415



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 1/281 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK   A  +F+ + + G     +TY  L+  L R+ +      L+ ++++  + P +  F
Sbjct: 226 GKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTF 285

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +++    +G +D+A+   +K+K  G  PT  TYN LI G+  VG      +L++ M +
Sbjct: 286 NMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREM-E 344

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D+ + P+  TY IL+  +   + IE+A+ + + M   G+ PD  TY  L       G   
Sbjct: 345 DRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMV 404

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++   M    ++PN+     +++GYCKE N   A++FL  M +  V PN+  + S I
Sbjct: 405 EASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTI 464

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
           +       S    + L  M E G+KP     S +  A S A
Sbjct: 465 QILCKDGKSIEAKRLLKEMTEAGLKPPESLCSKVGQAKSCA 505



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/336 (22%), Positives = 162/336 (48%), Gaps = 1/336 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  +F+ + + G       YT ++    ++   K    L  K++  G+ P+   +
Sbjct: 156 GDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTY 215

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N++I      G +  A K+F ++   G      TYN LI G    G+  ++  LL+ M +
Sbjct: 216 NSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKR 275

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
             ++ P  RT+N+L+   C+   +++A + + K+   G+ P  VTYN L   +++ G + 
Sbjct: 276 -AHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSS 334

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
              +++ EM++  + P++ T  I+++ + +  ++E A    + MK + + P+   +  LI
Sbjct: 335 VVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLI 394

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G     +     K    M E  ++P+ V ++T+++ +       K  +  ++MVK G+ 
Sbjct: 395 HGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVT 454

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
           P++  +    +   + G+  +A+ +L  M + G+ P
Sbjct: 455 PNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490



 Score = 39.3 bits (90), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 21/94 (22%), Positives = 46/94 (48%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG   EA  ++  ++E   +P  + Y T++    ++      L  + ++ K+G+ P+   
Sbjct: 400 KGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVAS 459

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS 100
           + + I    + G   EA ++ ++M ++G KP  S
Sbjct: 460 YISTIQILCKDGKSIEAKRLLKEMTEAGLKPPES 493


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 192/379 (50%), Gaps = 1/379 (0%)

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + P+   +N +I      G + + +  F +M+ +GC P   TYNTLI  Y  +G+ +E+ 
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            LL+ MS  K ++PN  +YN+++   C + S++EAW ++ +M   G  PD VTYNTL   
Sbjct: 66  GLLKSMSS-KGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNG 124

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           Y + G  ++A  +  EM  N V P+  T   +++  CK  N+  AM F  +M+   + PN
Sbjct: 125 YCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPN 184

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
              + +LI GF      +   + L  M E G  P VVT++  +        M +   +  
Sbjct: 185 ERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQ 244

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +MV+ G+ PD+  +S +  G+ R GE  +A  +   M + GV P+ V ++++I G C   
Sbjct: 245 EMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMR 304

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           ++  A  + ++M ++G+ P+  TY TL+  Y       +A  L   M  KG  P   T  
Sbjct: 305 RLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYS 364

Query: 420 LVADSWRAIGLAREAKRVL 438
           ++ +        REAKR+L
Sbjct: 365 VLINGLNKQARTREAKRLL 383



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 126/501 (25%), Positives = 233/501 (46%), Gaps = 33/501 (6%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P + TY  L+         +  L    ++E++G  P+ + +N +I+A  + G +DEA  +
Sbjct: 8   PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            + M   G +P   +YN +I G    G  +E+ ++L+ M   K   P++ TYN L+  +C
Sbjct: 68  LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGY-KGFTPDEVTYNTLLNGYC 126

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            + +  +A  +  +MV +G+ P  VTY  L  +  +     RA +   +M+   +RPNER
Sbjct: 127 KEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNER 186

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   ++ G+ ++G + +A R L  M E    P++V +N+ I G   ++  +     +  M
Sbjct: 187 TYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM 246

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            E G+ PDVV++STI+  +   G + +  ++  +MV+ G+ PD   +S L +G       
Sbjct: 247 VEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRL 306

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +A  +   M   G+ P+   +TT+I+ +C    + +A+ ++++M   G  P+  TY  L
Sbjct: 307 TEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVL 366

Query: 387 LWGYGEAKQPWRAEELL-QVMEEKGVRPKKSTIQLVADSWRAI---------------GL 430
           + G  +  +   A+ LL +++ E+ V P   T   + ++   I               GL
Sbjct: 367 INGLNKQARTREAKRLLFKLIYEESV-PSDVTYDTLIENCSNIEFKSVVALIKGFCMKGL 425

Query: 431 AREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSEHNGSSAA 490
             EA RV +S  E           + +    R  NL  + + + ++              
Sbjct: 426 MHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEM-------------- 471

Query: 491 KIRSQIVLRSDTVWTATKSLF 511
            I S  V  + TV T  K+LF
Sbjct: 472 -IHSGFVPHTVTVITLIKALF 491



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 181/336 (53%), Gaps = 1/336 (0%)

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M  S   P   TYN LI+G+ +VG+ ++ L     M ++  + PN  TYN L+ A+C   
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCL-PNVVTYNTLIDAYCKMG 59

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            I+EA+ ++  M + G+QP+ ++YN +     + G    A ++L EM      P+E T  
Sbjct: 60  RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 119

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            +++GYCKEGN   A+     M    V P++V + +LI      ++ +   +    M   
Sbjct: 120 TLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR 179

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G++P+  T++T++D +S  GL+ +   I ++M ++G  P +  ++    G+      ++A
Sbjct: 180 GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEA 239

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             ++  M + G+ P+VV ++T+ISG+C   ++ RA  + ++M E G++P+  TY +L+ G
Sbjct: 240 LGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQG 299

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
             E ++   A +L Q M + G+ P + T   + +++
Sbjct: 300 LCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAY 335



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 110/477 (23%), Positives = 217/477 (45%), Gaps = 18/477 (3%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +   +  +G +P LI+Y  ++  L R+   K    ++ ++   G  PD + +
Sbjct: 59  GRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTY 118

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++N   + GN  +A+ I  +M  +G  P+  TY  LI           +++    M +
Sbjct: 119 NTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM-R 177

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + ++PN+RTY  L+  +  +  + EA+ ++ +M  SG  P  VTYN     +       
Sbjct: 178 IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERME 237

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  ++ EM    + P+  +   I+SG+C++G ++ A +    M E  V P+ V ++SLI
Sbjct: 238 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 297

Query: 248 KGFLDIKD-SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +G  +++  ++  D +  ++ + G+ PD  T++T+++A+   G + K   + D+M+  G 
Sbjct: 298 QGLCEMRRLTEACDLSQEML-DMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGF 356

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS------------- 353
            PD   +S+L  G  +    ++A+ +L  +      P+ V + T+I              
Sbjct: 357 LPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVAL 416

Query: 354 --GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
             G+C    M  A  ++E M E    P    Y  ++ G+       +A  L + M   G 
Sbjct: 417 IKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGF 476

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSA 468
            P   T+  +  +    G+  E   V+       +    +  ++ VE  H++ N+ A
Sbjct: 477 VPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEA 533



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 197/405 (48%), Gaps = 22/405 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G   EA  I   +  +G  P  +TY TL+    ++  F   L + +++ ++G+
Sbjct: 87  INGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGV 146

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + + A+IN+  ++ N++ AM+ F +M+  G +P   TY TLI G+   G   E+ +
Sbjct: 147 SPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYR 206

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M++     P+  TYN  +   C    +EEA  VV +MV  G+ PD V+Y+T+   +
Sbjct: 207 ILNEMTE-SGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 265

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + GE  RA QM  EM    V P+  T   ++ G C+   + +A      M ++ + P+ 
Sbjct: 266 CRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDE 325

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE- 296
             + +LI  +    D   ++KAL L +E    G  PD VT+S +++  +      + +  
Sbjct: 326 FTYTTLINAYCVEGD---LNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRL 382

Query: 297 ----IFDDMVKAGIEPD--------IHVFSILA--KGYVRAGEPQKAESILTSMRKYGVH 342
               I+++ V + +  D        I   S++A  KG+   G   +A+ +  SM +    
Sbjct: 383 LFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHK 442

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           P   ++  +I G C    + +A ++Y++M   G  P+  T  TL+
Sbjct: 443 PGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLI 487



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 52/99 (52%)

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
           V PNV  +  +I G+C+  ++Q+ +  + +M   G  PN+ TY TL+  Y +  +   A 
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            LL+ M  KG++P   +  ++ +     G  +EA  +L+
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILE 104


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 212/413 (51%), Gaps = 3/413 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   EA  + + +  +G  P + TY T++  L +  +++    + +++ + G+ PDS  
Sbjct: 273 QGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 332

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           + +++    + G+  E   IF  M+     P    +++++  +   G  +++L     + 
Sbjct: 333 YRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV- 391

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++  + P++  Y IL++ +C K  I EA N+  +M+  G   D VTYNT+     +    
Sbjct: 392 KEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 451

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+++  EM    + P+  T  I++ G+CK GN+++AM    +MKE  +  ++V +N+L
Sbjct: 452 GEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTL 511

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + GF  + D D   +    M    + P  ++FS +++A  S G + +   ++D+M+   I
Sbjct: 512 LDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSI 571

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           +P + + + + KGY R+G     E  L  M   G  P+ + + T+I G+     M +A  
Sbjct: 572 KPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFG 631

Query: 367 IYEKMCEI--GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           + +KM E   G+ P++ TY ++L G+    Q   AE +L+ M E+GV P +ST
Sbjct: 632 LVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRST 684



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 190/377 (50%), Gaps = 3/377 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG   E   IF+ +      P L+ ++++++  TR       L   + V++ G+ PD+++
Sbjct: 343 KGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 402

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +  +I      G + EAM +  +M   GC     TYNT++ G        E+ KL   M+
Sbjct: 403 YTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 462

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + + + P+  T  IL+   C   +++ A  +  KM    I+ D VTYNTL   + + G+ 
Sbjct: 463 E-RGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDI 521

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+++  +M + ++ P   +  I+V+  C +G++ +A R    M    + P +++ NS+
Sbjct: 522 DTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSM 581

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM--VKA 304
           IKG+    ++   +  L  M   G  PD ++++T++  +     M K   +   M   + 
Sbjct: 582 IKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQG 641

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+ PD+  ++ +  G+ R  + ++AE++L  M + GV+P+   +T++I+G+ +   +  A
Sbjct: 642 GLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEA 701

Query: 365 MSIYEKMCEIGINPNLK 381
              +++M + G +P+ K
Sbjct: 702 FRFHDEMLQRGFSPDDK 718



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 190/373 (50%), Gaps = 7/373 (1%)

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           NA+I +    G V+ A +I+Q++  SG      T N ++      GK E+    L  + Q
Sbjct: 194 NALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEV-Q 252

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +K V P+  TYN L+ A+ S+  +EEA+ +++ M + G  P   TYNT+     ++G+  
Sbjct: 253 EKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYE 312

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           RA+++  EM  + + P+  T   ++   CK+G+  +       M+  +V P+LV F+S++
Sbjct: 313 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMM 372

Query: 248 KGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
             F     S  +DKAL     ++E G+ PD V ++ ++  +   G++ +   + ++M++ 
Sbjct: 373 SLF---TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQ 429

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G   D+  ++ +  G  +     +A+ +   M + G+ P+    T +I G C    +Q A
Sbjct: 430 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNA 489

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           M +++KM E  I  ++ TY TLL G+G+      A+E+   M  K + P   +  ++ ++
Sbjct: 490 MELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNA 549

Query: 425 WRAIGLAREAKRV 437
             + G   EA RV
Sbjct: 550 LCSKGHLSEAFRV 562



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 99/408 (24%), Positives = 191/408 (46%), Gaps = 7/408 (1%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA+  F  L  +G+  ++     L+ +L R    +    +  ++ + G+  +    N
Sbjct: 170 KLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLN 229

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            M+NA  + G +++      ++++ G  P   TYNTLI  Y + G  EE+ +L+  M   
Sbjct: 230 IMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPS- 288

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K   P   TYN ++   C     E A  V  +M+ SG+ PD+ TY +L     + G+   
Sbjct: 289 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVE 348

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
            E +  +M++  V P+      ++S + + GN++ A+ +   +KE  + P+ V++  LI+
Sbjct: 349 TENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQ 408

Query: 249 GFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           G+        + +A+ L  E    G   DVVT++TI+       ++G+  ++F++M + G
Sbjct: 409 GYC---RKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERG 465

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + PD +  +IL  G+ + G  Q A  +   M++  +  +VV + T++ G+     +  A 
Sbjct: 466 LFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAK 525

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            I+  M    I P   ++  L+           A  +   M  K ++P
Sbjct: 526 EIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKP 573



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/403 (23%), Positives = 180/403 (44%), Gaps = 18/403 (4%)

Query: 60  MKPDSILFNAMINACSESGNVDEAMK-IFQKMKDSG----------------CKPTTSTY 102
            K  S+  +AMI+    SG + +A   + + ++ SG                C    S +
Sbjct: 99  FKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVF 158

Query: 103 NTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV 162
           + LI+ +    K  E+ +   L+ + K    +    N L+ +      +E AW +  ++ 
Sbjct: 159 DLLIRTFVQARKLREAYEAFTLL-RSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEIS 217

Query: 163 ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNME 222
            SG+  +  T N +  A  + G+  +    L E+Q   V P+  T   ++S Y  +G ME
Sbjct: 218 RSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLME 277

Query: 223 DAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIM 282
           +A   ++ M      P +  +N++I G       +   +    M   G+ PD  T+ +++
Sbjct: 278 EAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 337

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
                 G   + + IF DM    + PD+  FS +   + R+G   KA     S+++ G+ 
Sbjct: 338 MEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 397

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           P+ V++T +I G+C    +  AM++  +M + G   ++ TY T+L G  + K    A++L
Sbjct: 398 PDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 457

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
              M E+G+ P   T+ ++ D    +G  + A  + K  +E R
Sbjct: 458 FNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKR 500


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 222/437 (50%), Gaps = 1/437 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   EA  + + +  +G +P + TY  ++  L +  ++     ++ ++ K GM
Sbjct: 296 INAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGM 355

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD+  +N ++  C  + N+ +A +IF +M   G  P   +++ LI      G  +++LK
Sbjct: 356 SPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALK 415

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             + M ++  + P++  Y IL+  +C    + EA  V  +M+  G   D VTYNT+    
Sbjct: 416 YFRDM-KNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGL 474

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A+++  EM    V P+  T   +++GY K+GNM  A+     M +  + P++
Sbjct: 475 CKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDV 534

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+LI GF    + + V++    M    + P+ +++  +++ + + G + +   ++D+
Sbjct: 535 VTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDE 594

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ G E  I   + + KGY RAG   KA+  L++M   G+ P+ + + T+I+G+     
Sbjct: 595 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 654

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M RA ++  KM   G+ P++ TY  +L G+    +   AE ++  M E+GV P +ST   
Sbjct: 655 MDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTS 714

Query: 421 VADSWRAIGLAREAKRV 437
           + +        +EA RV
Sbjct: 715 LINGHVTQNNLKEAFRV 731



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 215/422 (50%), Gaps = 1/422 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV  G    A  I+  ++  G +  + T   ++ AL + ++ ++  S +S +E+ G+ PD
Sbjct: 229 LVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPD 288

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +INA    G ++EA ++   M   G KP   TYN +I G    GK   +  +L 
Sbjct: 289 VVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLD 348

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +   + P+  TYNIL+   C  +++ +A  +  +M + G+ PD V+++ L    ++ 
Sbjct: 349 EMLK-IGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKN 407

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G   +A +   +M+N  + P+     I++ G+C+ G M +A++    M E     ++V +
Sbjct: 408 GCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTY 467

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+++ G    K     D+  T M E GV PD  TF+T+++ +S  G M K   +F+ M++
Sbjct: 468 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQ 527

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
             ++PD+  ++ L  G+ +  E +K   +   M    ++PN + +  +I+G+CN   +  
Sbjct: 528 RNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSE 587

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  ++++M E G    + T  T++ GY  A    +A+E L  M  KG+ P   T   + +
Sbjct: 588 AFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 647

Query: 424 SW 425
            +
Sbjct: 648 GF 649



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 195/370 (52%), Gaps = 1/370 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  IF+ +  +G  P L++++ L+  L++       L     ++  G+ PD++++  +I
Sbjct: 377 DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 436

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                +G + EA+K+  +M + GC     TYNT++ G        E+ +L   M++ + V
Sbjct: 437 GGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTE-RGV 495

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  T+  L+  +    ++ +A  +   M+   ++PD VTYNTL   + +  E  +  +
Sbjct: 496 FPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNE 555

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  +M + ++ PN  + GI+++GYC  G + +A R    M E      ++  N+++KG+ 
Sbjct: 556 LWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYC 615

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
              ++   D+ L+ M   G+ PD +T++T+++ +     M +   + + M  +G+ PD+ 
Sbjct: 616 RAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVI 675

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++++  G+ R G  Q+AE I+  M + GV+P+   +T++I+G      ++ A  ++++M
Sbjct: 676 TYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEM 735

Query: 372 CEIGINPNLK 381
            + G  P+ K
Sbjct: 736 LQRGFVPDDK 745



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/413 (23%), Positives = 179/413 (43%), Gaps = 57/413 (13%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-QLM 125
           F+AMI+    S  + +A  +  +M             +L+  YGN G       LL +  
Sbjct: 135 FSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTY 194

Query: 126 SQDKNVKPNDRTYNIL-VRAWC-SKNS-------------IEEAWNVVYKMVASGIQ--- 167
            Q + ++     + +L  +  C S N+             ++ AW +  ++V SG+Q   
Sbjct: 195 VQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNV 254

Query: 168 --------------------------------PDAVTYNTLARAYAQYGETYRAEQMLFE 195
                                           PD VTYNTL  AY + G    A +++  
Sbjct: 255 YTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDS 314

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M    ++P   T   I++G CK G    A   L  M ++ + P+   +N L+   ++   
Sbjct: 315 MSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL---VECCR 371

Query: 256 SDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +D +  A  + +E    GV PD+V+FS ++   S  G + +  + F DM  AG+ PD  +
Sbjct: 372 NDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVI 431

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++IL  G+ R G   +A  +   M + G   +VV + T+++G C    +  A  ++ +M 
Sbjct: 432 YTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMT 491

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           E G+ P+  T+ TL+ GY +     +A  L ++M ++ ++P   T   + D +
Sbjct: 492 ERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGF 544



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 83/207 (40%), Gaps = 2/207 (0%)

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           + F  ++  +  A  + +  E F  +   G+   I+  + L  G V+ G    A  I   
Sbjct: 185 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 244

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           + + GV  NV     +I+  C   K++   S    M E G+ P++ TY TL+  Y     
Sbjct: 245 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 304

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEI 455
              A EL+  M  KG++P   T   + +     G    AK VL    +   S       I
Sbjct: 305 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 364

Query: 456 AVESIHRKQNLSASNSTFLQIP--GVV 480
            +    R  N+  +   F ++P  GVV
Sbjct: 365 LLVECCRNDNMMDAERIFDEMPSQGVV 391


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 229/469 (48%), Gaps = 1/469 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  +A  +F  +I     PT+I ++ L +A+ + K++  +L+L  ++E  G+  +    +
Sbjct: 68  KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            MIN       +  A     K+   G +P T T++TLI G    G+  E+L+L+  M + 
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
            + KP+  T N LV   C      EA  ++ KMV  G QP+AVTY  +     + G+T  
Sbjct: 188 GH-KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A ++L +M+   ++ +     II+ G CK G++++A      M+   +  N++ +N LI 
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           GF +    D   K L  M +  + P+VVTFS ++D++   G + + +E+  +M+  GI P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D   ++ L  G+ +     KA  ++  M   G  PN+  F  +I+G+C A ++   + ++
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            KM   G+  +  TY TL+ G+ E  +   A+EL Q M  + V P   T +++ D     
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486

Query: 429 GLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIP 477
           G + +A  + +  E+ +  +      I +  +     +  +   F  +P
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 535



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 217/423 (51%), Gaps = 1/423 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  EA  + + ++E G +P  +TY  ++  + +  +    + L+ K+E+  +
Sbjct: 200 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K D++ ++ +I+   + G++D A  +F +M+  G      TYN LI G+ N G+ ++  K
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M + K + PN  T+++L+ ++  +  + EA  +  +M+  GI PD +TY +L   +
Sbjct: 320 LLRDMIKRK-INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +     +A QM+  M +    PN RT  I+++GYCK   ++D +    +M    V  + 
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+LI+GF ++   +   +    M    V P++VT+  ++D     G   K  EIF+ 
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           + K+ +E DI +++I+  G   A +   A  +  S+   GV P V  +  +I G C    
Sbjct: 499 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 558

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ KM E G  P+  TY  L+  +       ++ +L++ ++  G     STI++
Sbjct: 559 LSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKM 618

Query: 421 VAD 423
           V D
Sbjct: 619 VID 621



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 221/446 (49%), Gaps = 14/446 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  EA  + + ++E GH+P LIT  TLV  L    +    + LI K+ + G 
Sbjct: 165 INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGC 224

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+++ +  ++N   +SG    AM++ +KM++   K     Y+ +I G    G  + +  
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 284

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M   K +  N  TYNIL+  +C+    ++   ++  M+   I P+ VT++ L  ++
Sbjct: 285 LFNEMEM-KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   AE++  EM +  + P+  T   ++ G+CKE +++ A + +  M      PN+
Sbjct: 344 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 403

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             FN LI G+     ++ +D  L L  +    GV  D VT++T++  +   G +   +E+
Sbjct: 404 RTFNILINGYC---KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F +MV   + P+I  + IL  G    GE +KA  I   + K  +  ++ ++  +I G CN
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           A K+  A  ++  +   G+ P +KTY  ++ G  +      AE L + MEE G  P   T
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 580

Query: 418 IQLV-------ADSWRAIGLAREAKR 436
             ++        D+ +++ L  E KR
Sbjct: 581 YNILIRAHLGDGDATKSVKLIEELKR 606



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/428 (25%), Positives = 211/428 (49%), Gaps = 1/428 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +I+ G+ P  IT++TL+  L  + R    L L+ ++ + G KPD I  N ++N    SG 
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 208

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             EAM +  KM + GC+P   TY  ++      G+   +++LL+ M +++N+K +   Y+
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKYS 267

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           I++   C   S++ A+N+  +M   GI  + +TYN L   +   G      ++L +M   
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           ++ PN  T  +++  + KEG + +A      M    + P+ + + SLI GF      D  
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
           ++ + LM   G  P++ TF+ +++ +  A  +    E+F  M   G+  D   ++ L +G
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           +   G+   A+ +   M    V PN+V +  ++ G C+  + ++A+ I+EK+ +  +  +
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           +  Y  ++ G   A +   A +L   +  KGV+P   T  ++       G   EA+ + +
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 567

Query: 440 SAEEDRQS 447
             EED  +
Sbjct: 568 KMEEDGHA 575



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 141/302 (46%), Gaps = 11/302 (3%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            V +GK  EA  +   +I  G  P  ITYT+L+    ++        ++  +   G  P+
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              FN +IN   ++  +D+ +++F+KM   G    T TYNTLI+G+  +GK   + +L Q
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K V PN  TY IL+   C     E+A  +  K+  S ++ D   YN +       
Sbjct: 463 EMVSRK-VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 521

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +   A  +   +    V+P  +T  I++ G CK+G + +A     +M+E    P+   +
Sbjct: 522 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 581

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N LI+  L   D D   K++ L+EE    G   D  T   ++D  S     G+ ++ F D
Sbjct: 582 NILIRAHLG--DGDAT-KSVKLIEELKRCGFSVDASTIKMVIDMLSD----GRLKKSFLD 634

Query: 301 MV 302
           M+
Sbjct: 635 ML 636



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 3/246 (1%)

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           NL     L  G +DIK  D +D    ++    + P V+ FS +  A +          + 
Sbjct: 53  NLSYRERLRSGLVDIKADDAIDLFRDMIHSRPL-PTVIDFSRLFSAIAKTKQYDLVLALC 111

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
             M   GI  +++  SI+   + R  +   A S +  + K G  PN + F+T+I+G C  
Sbjct: 112 KQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLE 171

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            ++  A+ + ++M E+G  P+L T  TL+ G   + +   A  L+  M E G +P   T 
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 231

Query: 419 QLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF--LQI 476
             V +     G    A  +L+  EE    +   K  I ++ + +  +L  + + F  +++
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 291

Query: 477 PGVVSS 482
            G+ ++
Sbjct: 292 KGITTN 297


>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 195/368 (52%), Gaps = 1/368 (0%)

Query: 49  LSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
             L++++E  G+ P+  ++  +I AC  +G++D+A  +F +M D G       Y  +I G
Sbjct: 127 FELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMING 186

Query: 109 YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP 168
           +   G  ++  +L Q M +   V PN  TYN L+  +C    +  A+ V  ++   G+  
Sbjct: 187 FFKKGYKKDGFELYQKM-KLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVAC 245

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           +AVTYN L     + G+  +AE +L  M+   + P  RT  +++ G C  G ++ A+ +L
Sbjct: 246 NAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYL 305

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
            ++K + + P LV +N LI GF  + +S  V + +  ME+ G+ P  VT++ +M+ +  +
Sbjct: 306 EKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRS 365

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
             + K  E+F  M + G+ PD H + +L  G    G   +A  +  SM +  + PN V++
Sbjct: 366 DDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIY 425

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
            T+I+G+C      +A+   E+M + G+ PN+ +Y + +    +  +   A+ LL+ M E
Sbjct: 426 NTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTE 485

Query: 409 KGVRPKKS 416
            G++P +S
Sbjct: 486 AGLKPPES 493



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 153/311 (49%), Gaps = 7/311 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    KG   +   ++  +   G  P L TY +L+    R  +      +  ++ K G+
Sbjct: 184 INGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGV 243

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             +++ +N +I      G V +A  + ++MK +   PTT T+N L+ G  N G+ +++L 
Sbjct: 244 ACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALS 303

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L+ + +   + P   TYNIL+  +    +      +V +M   GI P  VTY  L   +
Sbjct: 304 YLEKL-KLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTF 362

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +  +A +M   M+   + P++ T G+++ G C +GNM +A +    M E+ + PN 
Sbjct: 363 VRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPND 422

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V++N++I G+    +S    KAL  +EE    GV P+V ++ + +      G   + + +
Sbjct: 423 VIYNTMINGYCKECNS---YKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRL 479

Query: 298 FDDMVKAGIEP 308
             +M +AG++P
Sbjct: 480 LKEMTEAGLKP 490



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 154/311 (49%), Gaps = 4/311 (1%)

Query: 116 EESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
           E+SL   +LM   K   P+  ++N  +       +++  W    + +    Q D  ++  
Sbjct: 55  EQSLDGFKLMVL-KGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGR-TQFDVYSFWI 112

Query: 176 LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
             +A+ + G   +  ++L +M+   V PN     I++   C+ G+++ A     RM +L 
Sbjct: 113 TIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLG 172

Query: 236 VHPNLVVFNSLIKGFLDIK-DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
           +  N  ++  +I GF       DG +     M+  GV P++ T+++++  +   G +   
Sbjct: 173 LAANQYIYTIMINGFFKKGYKKDGFE-LYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLA 231

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
            ++FD++ K G+  +   ++IL  G  R G+  KAE +L  M++  ++P    F  ++ G
Sbjct: 232 FKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDG 291

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            CN  ++ +A+S  EK+  IG+ P L TY  L+ G+ +        EL++ ME++G+ P 
Sbjct: 292 LCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPS 351

Query: 415 KSTIQLVADSW 425
           K T  ++ +++
Sbjct: 352 KVTYTILMNTF 362



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 1/281 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK   A  +F+ + + G     +TY  L+  L R+ +      L+ ++++  + P +  F
Sbjct: 226 GKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTF 285

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +++    +G +D+A+   +K+K  G  PT  TYN LI G+  VG      +L++ M +
Sbjct: 286 NMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREM-E 344

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D+ + P+  TY IL+  +   + IE+A+ + + M   G+ PD  TY  L       G   
Sbjct: 345 DRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMV 404

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++   M    ++PN+     +++GYCKE N   A++FL  M +  V PN+  + S I
Sbjct: 405 EASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTI 464

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
           +       S    + L  M E G+KP     S +  A S A
Sbjct: 465 QILCKDGKSIEAKRLLKEMTEAGLKPPESLCSKVGQAKSCA 505



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/383 (23%), Positives = 177/383 (46%), Gaps = 16/383 (4%)

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNT---LIKGYGNV----GKPEESLK 120
           +A+INA  +S  +++++  F+ M   G  P++ ++N    L+   GN+    G   E L 
Sbjct: 42  DAVINASLQSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLG 101

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             Q          +  ++ I ++A+C   ++ + + ++ +M   G+ P+   Y  L  A 
Sbjct: 102 RTQF---------DVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEAC 152

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+  +A+ M   M +  +  N+    I+++G+ K+G  +D      +MK + V PNL
Sbjct: 153 CRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNL 212

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +NSLI  +          K    + + GV  + VT++ ++      G + K + + + 
Sbjct: 213 YTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLER 272

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M +A I P    F++L  G    G+  KA S L  ++  G+ P +V +  +ISG+     
Sbjct: 273 MKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGN 332

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
                 +  +M + GI+P+  TY  L+  +  +    +A E+  +M+  G+ P + T  +
Sbjct: 333 SSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGV 392

Query: 421 VADSWRAIGLAREAKRVLKSAEE 443
           +       G   EA ++ KS  E
Sbjct: 393 LIHGLCIKGNMVEASKLYKSMVE 415



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/336 (22%), Positives = 162/336 (48%), Gaps = 1/336 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  +F+ + + G       YT ++    ++   K    L  K++  G+ P+   +
Sbjct: 156 GDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTY 215

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N++I      G +  A K+F ++   G      TYN LI G    G+  ++  LL+ M +
Sbjct: 216 NSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKR 275

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
             ++ P  RT+N+L+   C+   +++A + + K+   G+ P  VTYN L   +++ G + 
Sbjct: 276 -AHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSS 334

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
              +++ EM++  + P++ T  I+++ + +  ++E A    + MK + + P+   +  LI
Sbjct: 335 VVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLI 394

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G     +     K    M E  ++P+ V ++T+++ +       K  +  ++MVK G+ 
Sbjct: 395 HGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVT 454

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
           P++  +    +   + G+  +A+ +L  M + G+ P
Sbjct: 455 PNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490



 Score = 39.3 bits (90), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 21/94 (22%), Positives = 46/94 (48%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG   EA  ++  ++E   +P  + Y T++    ++      L  + ++ K+G+ P+   
Sbjct: 400 KGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVAS 459

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS 100
           + + I    + G   EA ++ ++M ++G KP  S
Sbjct: 460 YISTIQILCKDGKSIEAKRLLKEMTEAGLKPPES 493


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 221/419 (52%), Gaps = 10/419 (2%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           RPT ++YTTL+ AL  ++R    + L+  ++  G++PD + +  +I    ++ +VD+A++
Sbjct: 110 RPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVE 169

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           + ++M +SG +P    Y+ L++GY   G+ E   K+ + MS  + ++P+   Y  L+ + 
Sbjct: 170 LLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMS-GRGIEPDVVMYTGLIDSL 228

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C +  +++A  V+ KM+  G++P+ VTYN L  +  + G    A  +   M    V  + 
Sbjct: 229 CREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDA 288

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRM--KELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
            T   +++G      M++AM  L  M   E  V PN+V FNS+I G           +  
Sbjct: 289 VTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVR 348

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            +M E G   ++VTF+ ++        + K  E+ D+M  +G+EPD   +SIL  G+ + 
Sbjct: 349 DMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKM 408

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM---CEIGINPNL 380
            +  +AES+L+ MR+ G+ P +V +  +++  C    M++A + +++M   C++    ++
Sbjct: 409 WQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKL----DV 464

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             Y T++ G    +    AEE L+ M ++G+ P   T  ++ + +   G    A+RVLK
Sbjct: 465 VAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLK 523



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 210/435 (48%), Gaps = 12/435 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L  + +  +A  +   +   G RP ++TY TL+  L         + L+ ++ + G+
Sbjct: 120 MRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGI 179

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ ++++ ++    ++G  +   K+F++M   G +P    Y  LI      GK +++ +
Sbjct: 180 EPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQ 239

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           ++  M  ++ ++PN  TYN+L+ + C + S++EA ++   M+  G+  DAVTYNTL    
Sbjct: 240 VMDKM-MERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGL 298

Query: 181 AQYGETYRAEQMLFEMQNNQ--VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           +   E   A  +L EM + +  V PN  T   ++ G CK G M  A +    M E     
Sbjct: 299 SGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCAC 358

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           NLV FN LI G L +     V KA+ LM+E    G++PD  T+S +++ +     + + +
Sbjct: 359 NLVTFNLLIGGLLRVHK---VKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAE 415

Query: 296 EIFDDMVKAGIEPD-IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
            +   M + GIEP+ +H   +LA      G  ++A +    M K     +VV ++T+I G
Sbjct: 416 SLLSKMRRDGIEPELVHYIPLLA-ALCEQGMMEQARNFFDEMHK-NCKLDVVAYSTMIHG 473

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C     + A    + M + G+ P+  TY  L+  +  +     AE +L+ M   G  P 
Sbjct: 474 ACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPD 533

Query: 415 KSTIQLVADSWRAIG 429
            +    +   + A G
Sbjct: 534 VAVFDSLIKGYGAKG 548



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 106/452 (23%), Positives = 213/452 (47%), Gaps = 17/452 (3%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           + E G  P ++ Y+ L+    +  R++ +  +  ++   G++PD +++  +I++    G 
Sbjct: 174 MCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGK 233

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V +A ++  KM + G +P   TYN LI      G  +E++ L   M  +K V  +  TYN
Sbjct: 234 VKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNM-LEKGVALDAVTYN 292

Query: 140 ILVRAWCSKNSIEEAWNVVYKMV--ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
            L+        ++EA  ++ +M+   + ++P+ VT+N++     + G   +A Q+   M 
Sbjct: 293 TLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMA 352

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
            N    N  T  +++ G  +   ++ AM  +  M    + P+   ++ LI GF  +   D
Sbjct: 353 ENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVD 412

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
             +  L+ M   G++P++V +  ++ A    G+M + +  FD+M K   + D+  +S + 
Sbjct: 413 RAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHK-NCKLDVVAYSTMI 471

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            G  R  + + AE  L  M   G+ P+ V ++ +I+ + N+  +  A  + ++M   G  
Sbjct: 472 HGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFV 531

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           P++  +++L+ GYG      +  EL++ M  K +      I  +   +  +    E K +
Sbjct: 532 PDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTI---YTCLVANNEGKAL 588

Query: 438 LKSAEEDRQSMPNKKDEI---AVESIHRKQNL 466
           L       QS+P    E+   AV S H   N+
Sbjct: 589 L-------QSVPGFDTEVSKGAVISSHELTNM 613



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/372 (25%), Positives = 183/372 (49%), Gaps = 37/372 (9%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  +   G  P ++ YT L+ +L R+ + K    ++ K+ + G++P+ + +N +IN+  
Sbjct: 205 VFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMC 264

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN-VKPN 134
           + G+V EAM +   M + G      TYNTLI G   V + +E++ LL+ M   +  V+PN
Sbjct: 265 KEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPN 324

Query: 135 DRTYNILVRAWCSKNSIEEAWNV-------------------------VYK--------- 160
             T+N ++   C    + +A+ V                         V+K         
Sbjct: 325 VVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMD 384

Query: 161 -MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEG 219
            M +SG++PD+ TY+ L   + +  +  RAE +L +M+ + + P       +++  C++G
Sbjct: 385 EMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQG 444

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
            ME A  F   M +     ++V ++++I G   ++D    ++ L  M + G+ PD VT+S
Sbjct: 445 MMEQARNFFDEMHK-NCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYS 503

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
            +++ ++++G +G  + +   M  +G  PD+ VF  L KGY   G+ +K   ++  M   
Sbjct: 504 MLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAK 563

Query: 340 GVHPNVVMFTTV 351
            +  +  + +T+
Sbjct: 564 DIALDSKIISTI 575



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 154/287 (53%), Gaps = 2/287 (0%)

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           +YN ++ A C +    +A   + +++A   +P AV+Y TL RA      T +A  +L +M
Sbjct: 80  SYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDM 139

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
           Q + VRP+  T G ++ G C   +++ A+  L  M E  + PN+VV++ L++G+      
Sbjct: 140 QASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRW 199

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           + V K    M   G++PDVV ++ ++D+    G + K  ++ D M++ G+EP++  +++L
Sbjct: 200 ECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVL 259

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC--EI 374
                + G  ++A S+  +M + GV  + V + T+I+G    ++M  AM + E+M   E 
Sbjct: 260 INSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGET 319

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            + PN+ T+ +++ G  +  +  +A ++  +M E G      T  L+
Sbjct: 320 MVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLL 366



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 161/328 (49%), Gaps = 5/328 (1%)

Query: 101 TYNTLIKGYGNVGKP-EESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVY 159
           +YNT++      G   + +L LL++M+ +   +P   +Y  L+RA C++    +A  ++ 
Sbjct: 80  SYNTVLAALCRQGGCLDAALFLLRVMAHE--TRPTAVSYTTLMRALCAERRTGQAVGLLR 137

Query: 160 KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEG 219
            M ASG++PD VTY TL R      +  +A ++L EM  + + PN      ++ GYCK G
Sbjct: 138 DMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAG 197

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
             E   +    M    + P++V++  LI             + +  M E G++P+VVT++
Sbjct: 198 RWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYN 257

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM--R 337
            ++++    G + +   + ++M++ G+  D   ++ L  G     E  +A  +L  M   
Sbjct: 258 VLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHG 317

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
           +  V PNVV F +VI G C   +M++A  + + M E G   NL T+  L+ G     +  
Sbjct: 318 ETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVK 377

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSW 425
           +A EL+  M   G+ P   T  ++ + +
Sbjct: 378 KAMELMDEMASSGLEPDSFTYSILINGF 405



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 134/274 (48%), Gaps = 8/274 (2%)

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           DAV+YNT+  A  + G    A   L  +  ++ RP   +   ++   C E     A+  L
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAW 285
             M+   V P++V + +LI+G  D  D   VDKA+ L+ E    G++P+VV +S ++  +
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAAD---VDKAVELLREMCESGIEPNVVVYSCLLQGY 193

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
             AG      ++F++M   GIEPD+ +++ L     R G+ +KA  ++  M + G+ PNV
Sbjct: 194 CKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNV 253

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
           V +  +I+  C    ++ AMS+   M E G+  +  TY TL+ G     +   A  LL+ 
Sbjct: 254 VTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEE 313

Query: 406 M--EEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           M   E  V P   T   V       G  R+A +V
Sbjct: 314 MIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQV 347



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 2/228 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  +A  + + + E G    L+T+  L+  L R  + K  + L+ ++   G++PD
Sbjct: 335 LCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPD 394

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           S  ++ +IN   +   VD A  +  KM+  G +P    Y  L+      G  E++     
Sbjct: 395 SFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFD 454

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   KN K +   Y+ ++   C     + A   +  M+  G+ PD+VTY+ L   +A  
Sbjct: 455 EMH--KNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANS 512

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
           G+   AE++L +M  +   P+      ++ GY  +G+ E  +  +  M
Sbjct: 513 GDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREM 560


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 196/388 (50%), Gaps = 2/388 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT  TY  L+   TR  R +  L+   ++ + G++ D+I+ + ++    E+   DEA+ I
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 87  -FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV-KPNDRTYNILVRA 144
              +  + GC P   +YN L+K   N GK  ++  LL++M++   V  P+   YN ++  
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +  +  + +A ++  +MV  GI PD VTY+++  A  +     +AE  L +M N  V P+
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   ++ GY   G  ++A+R    M+   + P++V  N+L+                 
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M   G  PDV +++ +++ +++ G +    ++FD M+  GI PDI+ F++L K Y   G
Sbjct: 351 TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 410

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              KA  I   MR +GV P+VV + TVI+  C   KM  AM  + +M + G+ P+   Y 
Sbjct: 411 MLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVR 412
            L+ G+       +A+EL+  +   G+R
Sbjct: 471 CLIQGFCTHGSLLKAKELISEIMNNGMR 498



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 217/418 (51%), Gaps = 7/418 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  ++A  +F  +++ G  P L+TY+++V AL + +      + + ++   G+ PD+  
Sbjct: 234 EGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWT 293

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I   S +G   EA+++F++M+     P     NTL+      GK +E+  +   M+
Sbjct: 294 YNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMA 353

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K   P+  +Y I++  + +K  + +  ++   M+  GI PD  T+N L +AYA  G  
Sbjct: 354 M-KGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGML 412

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A  +  EM+++ V+P+  T   +++  C+ G M+DAM    +M +  V P+   ++ L
Sbjct: 413 DKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCL 472

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           I+GF        + KA  L+ E    G++ D+V F +I++     G +   Q IFD  V 
Sbjct: 473 IQGFC---THGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVN 529

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ PD  V+++L  GY   G+ +KA  +  +M   G+ PNVV + T+++G+C   ++  
Sbjct: 530 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 589

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            +S++ +M + GI P+   Y  ++ G  EA +   A+     M E G+   K T  +V
Sbjct: 590 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 647



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 205/428 (47%), Gaps = 11/428 (2%)

Query: 1   MNILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
           +N L+G     GK  EA  +F+ +  +G  P + +YT ++     +     +  L   + 
Sbjct: 329 LNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLML 388

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
            DG+ PD   FN +I A +  G +D+AM IF +M+D G KP   TY T+I     +GK +
Sbjct: 389 GDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMD 448

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           ++++    M  D+ V P+   Y+ L++ +C+  S+ +A  ++ +++ +G++ D V + ++
Sbjct: 449 DAMEKFNQMI-DQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSI 507

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
                + G    A+ +     N  + P+     +++ GYC  G ME A+R    M    +
Sbjct: 508 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 567

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGK 293
            PN+V + +L+ G+  I     +D+ L+L  E    G+KP  + ++ I+D    AG    
Sbjct: 568 EPNVVGYGTLVNGYCKIGR---IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVP 624

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
            +  F +M ++GI  +   +SI+ +G  +     +A  +   +R   V  +++   T+I+
Sbjct: 625 AKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIA 684

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G     +++ A  ++  +   G+ P   TY  ++    +      AE++   M+  G  P
Sbjct: 685 GMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEP 744

Query: 414 KKSTIQLV 421
               +  V
Sbjct: 745 DSRLLNHV 752



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/435 (22%), Positives = 207/435 (47%), Gaps = 1/435 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F  +  +   P ++   TL+ +L +  + K    +   +   G  PD   +
Sbjct: 305 GQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 364

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             M+N  +  G + +   +F  M   G  P   T+N LIK Y N G  ++++ +   M +
Sbjct: 365 TIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM-R 423

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D  VKP+  TY  ++ A C    +++A     +M+  G+ PD   Y+ L + +  +G   
Sbjct: 424 DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLL 483

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A++++ E+ NN +R +    G I++  CK G + DA         + +HP+ VV+N L+
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G+  +   +   +    M   G++P+VV + T+++ +   G + +   +F +M++ GI+
Sbjct: 544 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 603

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P   +++I+  G   AG    A+     M + G+  N   ++ V+ G         A+ +
Sbjct: 604 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 663

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           ++++  + +  ++ T  T++ G  + ++   A++L   +   G+ P   T  ++  +   
Sbjct: 664 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLK 723

Query: 428 IGLAREAKRVLKSAE 442
            GL  EA+ +  S +
Sbjct: 724 EGLVEEAEDMFSSMQ 738



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 207/454 (45%), Gaps = 44/454 (9%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM--KPDSILFNAMINACSESGN 79
           E G  P + +Y  L+ +L  Q +      L+  + + G    PD + +N +I+   + G+
Sbjct: 177 ELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGD 236

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V++A  +F++M   G  P   TY++++         +++   L+ M  +K V P++ TYN
Sbjct: 237 VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMV-NKGVLPDNWTYN 295

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+  + S    +EA  V  +M    I PD V  NTL  +  +YG+   A  +   M   
Sbjct: 296 NLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMK 355

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+  +  I+++GY  +G + D       M    + P++  FN LIK +    +   +
Sbjct: 356 GQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAY---ANCGML 412

Query: 260 DKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           DKA+ +   M + GVKP VVT+ T++ A    G M    E F+ M+  G+ PD + +  L
Sbjct: 413 DKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCL 472

Query: 317 AKGYVRAGEPQKAESILT-----SMR------------------------------KYGV 341
            +G+   G   KA+ +++      MR                                G+
Sbjct: 473 IQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGL 532

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
           HP+ V++  ++ G+C   KM++A+ +++ M   GI PN+  Y TL+ GY +  +      
Sbjct: 533 HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLS 592

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           L + M +KG++P      ++ D     G    AK
Sbjct: 593 LFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 626



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/369 (21%), Positives = 177/369 (47%), Gaps = 7/369 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  IFN + + G +P ++TY T++AAL R  +    +   +++   G+ PD   +
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAY 469

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +I      G++ +A ++  ++ ++G +     + ++I     +G+  ++  +  L + 
Sbjct: 470 HCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDL-TV 528

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  + P+   YN+L+  +C    +E+A  V   MV++GI+P+ V Y TL   Y + G   
Sbjct: 529 NVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRID 588

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
               +  EM    ++P+     II+ G  + G    A    + M E  +  N   ++ ++
Sbjct: 589 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 648

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +G      +   D+A+ L +E     VK D++T +T++        + + +++F  + ++
Sbjct: 649 RGLF---KNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 705

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+ P    +SI+    ++ G  ++AE + +SM+  G  P+  +   V+       ++ RA
Sbjct: 706 GLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 765

Query: 365 MSIYEKMCE 373
            +   K+ E
Sbjct: 766 GAYLSKIDE 774



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/438 (20%), Positives = 183/438 (41%), Gaps = 49/438 (11%)

Query: 6   GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSI-------LSLISKVEKD 58
           G  +P EAH + + L   G           +AAL R     +        ++L ++    
Sbjct: 43  GTLRPEEAHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGPALAVALFNRAASR 102

Query: 59  G-----MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVG 113
                 + P S  +  +++ C+ +   + A+  F ++  +G +      + L+KG+    
Sbjct: 103 AQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAK 162

Query: 114 KPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG--IQPDAV 171
           + +E+L +L   + +    P+  +YNIL+++ C++    +A +++  M   G    PD V
Sbjct: 163 RTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVV 222

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
            YNT                                   ++ G+ KEG++  A      M
Sbjct: 223 AYNT-----------------------------------VIDGFFKEGDVNKACDLFKEM 247

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
            +  + P+LV ++S++      +  D  +  L  M   GV PD  T++ ++  +SS G  
Sbjct: 248 VQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQW 307

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            +   +F +M +  I PD+   + L     + G+ ++A  +  +M   G +P+V  +T +
Sbjct: 308 KEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIM 367

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           ++G+     +     +++ M   GI P++ T+  L+  Y       +A  +   M + GV
Sbjct: 368 LNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGV 427

Query: 412 RPKKSTIQLVADSWRAIG 429
           +P   T   V  +   IG
Sbjct: 428 KPHVVTYMTVIAALCRIG 445



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 113/241 (46%), Gaps = 3/241 (1%)

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD-GVDK 261
           P   T  I++    +    E A+ F  ++    +  + ++ + L+KGF + K +D  +D 
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG--IEPDIHVFSILAKG 319
            L    E G  PDV +++ ++ +  + G  G+  ++   M + G    PD+  ++ +  G
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           + + G+  KA  +   M + G+ P++V +++V+   C A  M +A +   +M   G+ P+
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             TY  L++GY    Q   A  + + M  + + P    +  +  S    G  +EA+ V  
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 440 S 440
           +
Sbjct: 351 T 351



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/296 (21%), Positives = 132/296 (44%), Gaps = 4/296 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  +A  IF+  +  G  P  + Y  L+       + +  L +   +   G+
Sbjct: 508 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 567

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ + +  ++N   + G +DE + +F++M   G KP+T  YN +I G    G+   +  
Sbjct: 568 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M++   +  N  TY+I++R        +EA  +  ++ A  ++ D +T NT+    
Sbjct: 628 KFHEMTE-SGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 686

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q      A+ +   +  + + P   T  I+++   KEG +E+A      M+     P+ 
Sbjct: 687 FQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDS 746

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            + N +++  L   +       L+ ++E     + +T   ++D +SS    G C+E
Sbjct: 747 RLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSK---GTCRE 799



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 109/256 (42%), Gaps = 36/256 (14%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  +F+ ++  G  P ++ Y TLV    +  R    LSL  ++ + G+KP +IL+
Sbjct: 550 GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY 609

Query: 68  NAMINACSESGNV-----------------------------------DEAMKIFQKMKD 92
           N +I+   E+G                                     DEA+ +F++++ 
Sbjct: 610 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRA 669

Query: 93  SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIE 152
              K    T NT+I G     + EE+  L   +S+   V P   TY+I++     +  +E
Sbjct: 670 MNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV-PCAVTYSIMITNLLKEGLVE 728

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           EA ++   M  +G +PD+   N + R   +  E  RA   L ++          T  ++V
Sbjct: 729 EAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLV 788

Query: 213 SGYCKEGNMEDAMRFL 228
             +  +G   + +RFL
Sbjct: 789 DLFSSKGTCREQIRFL 804



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 11/185 (5%)

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV----KAGIEPDIHVFSILAKGYVRAGE 325
           G++ D +  S ++  +  A    +  E  D ++    + G  PD+  ++IL K     G+
Sbjct: 143 GLRVDAIIASHLLKGFCEAK---RTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGK 199

Query: 326 PQKAESILTSMRKYGV--HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
             +A+ +L  M + G    P+VV + TVI G+     + +A  ++++M + GI P+L TY
Sbjct: 200 SGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTY 259

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            +++    +A+   +AE  L+ M  KGV P   T   +   + + G  +EA RV K  E 
Sbjct: 260 SSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFK--EM 317

Query: 444 DRQSM 448
            RQS+
Sbjct: 318 RRQSI 322


>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Glycine max]
          Length = 830

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 225/447 (50%), Gaps = 1/447 (0%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           V  G   E   + + +  +G  P  ITYTT++ A  +  R    L L SK++  G  P+ 
Sbjct: 368 VRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNV 427

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
             +N+++    +    ++ +K+  +MK +GC P  +T+NT++      GK     K+L+ 
Sbjct: 428 YTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLRE 487

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M ++   +P+  T+N L+ ++    S  ++  +  +MV SG  P   TYN L  A A  G
Sbjct: 488 M-KNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRG 546

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +   AE ++ +MQ    +PNE +  +++  Y K GN+    +    + + +V P+ ++  
Sbjct: 547 DWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLR 606

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +L+      +   G+++A   ++++G KPD+V  ++++  +S   +  K +E+   + + 
Sbjct: 607 TLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHEC 666

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G++P++  ++ L   YVR  E  KAE +L  ++     P+VV + TVI G+C    MQ A
Sbjct: 667 GLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEA 726

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           + +  +M   GI P + TY T L GY   +    A E+++ M E   RP + T +++ D 
Sbjct: 727 IRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDG 786

Query: 425 WRAIGLAREAKRVLKSAEEDRQSMPNK 451
           +   G   EA   +   +E   S  +K
Sbjct: 787 YCKAGKHEEAMDFVTKIKEIDISFDDK 813



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 119/474 (25%), Positives = 224/474 (47%), Gaps = 43/474 (9%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDGMKPDSIL 66
           GK   A  +F+ +   G  PTL+TY  ++    +  R +  IL L+ ++   G++ D   
Sbjct: 230 GKYKRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFT 289

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            + +I+AC   G +DEA K   ++K +G KP T  YN++++ +G  G   E+L +L+ M 
Sbjct: 290 CSTVISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEM- 348

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +D N  P+  TYN L   +     ++E   V+  M + G+ P+A+TY T+  AY + G  
Sbjct: 349 EDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGRE 408

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++  +M++    PN  T   +++   K+   ED ++ L  MK     PN   +N++
Sbjct: 409 DDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTM 468

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +    +    + V+K L  M+  G +PD  TF+T++ +++  G      +++ +MVK+G 
Sbjct: 469 LAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGF 528

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN---------------------- 344
            P +  ++ L       G+ + AES++  M+  G  PN                      
Sbjct: 529 TPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEK 588

Query: 345 --------------VVMFTTVISGW-CNAVK-MQRAMSIYEKMCEIGINPNLKTYETLLW 388
                         +++ T V+S   C  ++ M+RA   ++++ + G  P+L    ++L 
Sbjct: 589 VEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGMERA---FDQLQKYGYKPDLVVINSMLS 645

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
            +   K   +A E+L  + E G++P   T   + D +       +A+ VLK  +
Sbjct: 646 MFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQ 699



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 180/392 (45%), Gaps = 3/392 (0%)

Query: 4   LVGKGKPHE-AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           ++G+   H  A  +F+ +  E +   +  YTT++ A  R  ++K  + L  K+E  G+ P
Sbjct: 190 ILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKYKRAIDLFDKMEGIGLDP 249

Query: 63  DSILFNAMINACSESGNV-DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
             + +N M++   + G      +++  +M+  G +    T +T+I   G  G  +E+ K 
Sbjct: 250 TLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGMLDEARKF 309

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           L  +  +   KP    YN +++ +       EA +++ +M  +   PD++TYN LA  Y 
Sbjct: 310 LAELKLN-GYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYV 368

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           + G       ++  M +  V PN  T   ++  Y K G  +DA+R   +MK+L   PN+ 
Sbjct: 369 RAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVY 428

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            +NS++        ++ V K L  M+  G  P+  T++T++   S  G      ++  +M
Sbjct: 429 TYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREM 488

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
              G EPD   F+ L   Y R G    +  +   M K G  P V  +  +++   +    
Sbjct: 489 KNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDW 548

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
           + A S+ + M   G  PN  +Y  LL  Y +A
Sbjct: 549 KAAESVIQDMQTKGFKPNETSYSLLLHCYSKA 580



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/414 (23%), Positives = 190/414 (45%), Gaps = 36/414 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A  +F+ + + G  P + TY +++A L ++ R + ++ ++ +++ +G  P+   +
Sbjct: 406 GREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATW 465

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N M+  CSE G  +   K+ ++MK+ G +P   T+NTLI  Y   G   +S K+   M +
Sbjct: 466 NTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVK 525

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                P   TYN L+ A   +   + A +V+  M   G +P+  +Y+ L   Y++ G   
Sbjct: 526 -SGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVR 584

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
             E++  E+ + QV P+      +V    K  ++    R   ++++    P+LVV NS++
Sbjct: 585 GIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSML 644

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKP---------------------------------- 273
             F   K      + L  + E G++P                                  
Sbjct: 645 SMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPE 704

Query: 274 -DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            DVV+++T++  +   GLM +   +  +M   GI+P I  ++    GY       +A  +
Sbjct: 705 PDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEV 764

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           +  M ++   P+ + +  ++ G+C A K + AM    K+ EI I+ + K+ + L
Sbjct: 765 IRFMIEHNCRPSELTYKILVDGYCKAGKHEEAMDFVTKIKEIDISFDDKSVKRL 818



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 141/332 (42%), Gaps = 43/332 (12%)

Query: 102 YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
           Y T++  Y   GK + ++ L                                      KM
Sbjct: 219 YTTILHAYARSGKYKRAIDLFD------------------------------------KM 242

Query: 162 VASGIQPDAVTYNTLARAYAQYGETY-RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
              G+ P  VTYN +   Y + G ++ R  ++L EM++  +  +E TC  ++S   +EG 
Sbjct: 243 EGIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGM 302

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           +++A +FL  +K     P  V++NS+++ F            L  ME+    PD +T++ 
Sbjct: 303 LDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNE 362

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           +   +  AG + +   + D M   G+ P+   ++ +   Y +AG    A  + + M+  G
Sbjct: 363 LAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLG 422

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN---PNLKTYETLLWGYGEAKQPW 397
             PNV  + +V++      K  R   + + +CE+ +N   PN  T+ T+L    E  +  
Sbjct: 423 CAPNVYTYNSVLAMLG---KKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHN 479

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
              ++L+ M+  G  P K T   +  S+   G
Sbjct: 480 YVNKVLREMKNCGFEPDKDTFNTLISSYARCG 511


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 215/441 (48%), Gaps = 15/441 (3%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV KG+      ++  ++  G  P ++TY TL+    RQ  F     L  ++ +  + P 
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++  +I        + EA  +F+ M++SG  P   TYNT++ GY  +   +++L+L Q
Sbjct: 228 VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQ 287

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D  + PN  T+ IL+   C  + +  A   +  M + G+ P+   YN L   Y + 
Sbjct: 288 EMLGD-GLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKA 346

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A  +  E++ +++ P+  T  I++ G C    ME+A   L  MK+    PN V +
Sbjct: 347 GNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTY 406

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+LI G+    + +   +  + M E G++P+++TFST++D +  AG M     ++ +MV 
Sbjct: 407 NTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI 466

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ PD+  ++ L  G+ + G  ++A  +   M++ G+HPNV   + +I G C   ++  
Sbjct: 467 KGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISD 526

Query: 364 AMSIY----------EKMCEIG---INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           A+ ++           K  E+     +PN   Y  L+ G     + ++A +    M   G
Sbjct: 527 AIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSG 586

Query: 411 VRPKKST-IQLVADSWRAIGL 430
           +RP   T I ++   +RA+ L
Sbjct: 587 LRPDVFTCIVIIQGHFRAMHL 607



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 185/363 (50%), Gaps = 1/363 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P +     ++  L ++ RF ++  +   +   G  P+ + +  +I+ C   G+  +A ++
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F +M +    PT   Y  LI+G     +  E+  + + M ++  + PN  TYN ++  +C
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM-RNSGMLPNLYTYNTMMDGYC 274

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               +++A  +  +M+  G+ P+ VT+  L     +  E   A + L +M +  V PN  
Sbjct: 275 KIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               ++ GYCK GN+ +A+     +++ E+ P++  ++ LIKG   +   +  D  L  M
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           ++ G  P+ VT++T++D +   G M K  E+   M + GIEP+I  FS L  GY +AG+ 
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           + A  + T M   G+ P+VV +T +I G       + A  ++++M E G++PN+ T   L
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514

Query: 387 LWG 389
           + G
Sbjct: 515 IDG 517



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 195/412 (47%), Gaps = 9/412 (2%)

Query: 35  LVAALTRQKRFK---SILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           L+  L   +R +   S+ +++S++E     P+  +F  +I A SE G V+EA+ ++ KM 
Sbjct: 96  LIQCLQNSRRSRICCSVFNVLSRLESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKMD 153

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
                P     N ++ G    G+ +   K+   M   +   PN  TY  L+   C +   
Sbjct: 154 ---VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVA-RGASPNVVTYGTLIDGCCRQGDF 209

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
            +A+ +  +M+   I P  V Y  L R          AE M   M+N+ + PN  T   +
Sbjct: 210 LKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTM 269

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           + GYCK  +++ A+     M    + PN+V F  LI G     +     K L  M  FGV
Sbjct: 270 MDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGV 329

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            P++  ++ ++D +  AG + +   +  ++ K  I PD+  +SIL KG       ++A+ 
Sbjct: 330 VPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADG 389

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +L  M+K G  PN V + T+I G+C    M++A+ +  +M E GI PN+ T+ TL+ GY 
Sbjct: 390 LLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC 449

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           +A +   A  L   M  KG+ P       + D     G  +EA R+ K  +E
Sbjct: 450 KAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 190/414 (45%), Gaps = 17/414 (4%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G+ +  EA  +F  +   G  P L TY T++    +    K  L L  ++  DG+ P+
Sbjct: 238 LCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPN 297

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + F  +I+   ++  +  A K    M   G  P    YN LI GY   G   E+L L  
Sbjct: 298 VVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHS 357

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            + + + + P+  TY+IL++  C  + +EEA  ++ +M   G  P+AVTYNTL   Y + 
Sbjct: 358 EIEKHE-ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKE 416

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G   +A ++  +M    + PN  T   ++ GYCK G ME AM     M    + P++V +
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY 476

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF----- 298
            +LI G     ++    +    M+E G+ P+V T S ++D     G +    ++F     
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTG 536

Query: 299 --------DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
                   +++ ++   P+  +++ L +G    G   KA    + MR  G+ P+V     
Sbjct: 537 TDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIV 596

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA---KQPWRAEE 401
           +I G   A+ ++  M +   + ++GI PN   Y  L  GY E+   K   R  E
Sbjct: 597 IIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSE 650


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 219/487 (44%), Gaps = 38/487 (7%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +  +G  PT++TY T++  L +     + + L  ++ K G  PD + +N +I++  ++G+
Sbjct: 72  MARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGD 131

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK-NVKPNDRTY 138
           ++EA ++   M   GC P   TY+ LI G   VG+ +E+ +L+Q M++   +V PN  TY
Sbjct: 132 LEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 191

Query: 139 NILVRAWCSKNSIEEAWNVVYK-----------------------------------MVA 163
           N  +   C ++   EA  ++                                     M+A
Sbjct: 192 NSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIA 251

Query: 164 SGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED 223
            G  P+ VTYN L     +  +  RA  M+  M +  V P+  T  ++V  +CK   +++
Sbjct: 252 GGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDE 311

Query: 224 AMRFLYRMKELEVHPNLVVFNSLIKGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFSTIM 282
           A+  L+ M      PN+V FNS+I G     +  +    AL +     V PD VTF+ ++
Sbjct: 312 ALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLV-PDKVTFNILI 370

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
                AG   +   +F++MV   ++PD+  F  L  G  +AG+ + A  IL  M   GV 
Sbjct: 371 AGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVP 430

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           PNVV +  ++ G C + +++      E+M   G  P   TY +L++    A +   A +L
Sbjct: 431 PNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQL 490

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHR 462
           +  ++  G  P   T  ++ D     G   +A  VL+          +         +HR
Sbjct: 491 VSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHR 550

Query: 463 KQNLSAS 469
             NL+ +
Sbjct: 551 SGNLAGT 557



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 194/400 (48%), Gaps = 7/400 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDG---MKPDSILFNAMINACSESGNVDEA 83
           P +ITY + +  L +Q        L+  + +DG   + PD++ F+ +I+   + G  DEA
Sbjct: 186 PNIITYNSFLDGLCKQSMTAEACELMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQTDEA 244

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
                 M   G  P   TYN L+ G     K E +  +++ M  DK V P+  TY++LV 
Sbjct: 245 CN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMV-DKGVTPDVITYSVLVD 301

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           A+C  + ++EA  +++ M + G  P+ VT+N++     +   +  A Q+  ++ N  + P
Sbjct: 302 AFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVP 361

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           ++ T  I+++G CK GN E A      M    + P+++ F +LI G       +     L
Sbjct: 362 DKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDIL 421

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            LM   GV P+VVT++ ++     +G + +  E  ++MV +G  P+   +  L     RA
Sbjct: 422 DLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRA 481

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
                A  +++ ++ +G  P+ V +  ++ G   + K ++A+++ E+M   G  P+  T+
Sbjct: 482 SRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTF 541

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
                G   +       ELL+V+  KG+ P  +T   + D
Sbjct: 542 AACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 195/398 (48%), Gaps = 14/398 (3%)

Query: 32  YTTLVAALTRQKRFKSILSLI-SKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           Y  ++ +L R       L +   ++ +DG+ P  + +N +IN   +S  +   M++F+++
Sbjct: 48  YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
              G  P   TYNTLI      G  EE+ +L   MS  +   PN  TY++L+   C    
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSS-RGCVPNVVTYSVLINGLCKVGR 166

Query: 151 IEEAWNVVYKMV--ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR--PNER 206
           I+EA  ++ +M   +  + P+ +TYN+      +   T  A +++  +++  +R  P+  
Sbjct: 167 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTV 226

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   ++ G CK G  ++A      M      PN+V +N+L+ G      +D +++A  ++
Sbjct: 227 TFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLC---KADKMERAHAMI 281

Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           E     GV PDV+T+S ++DA+  A  + +  E+   M   G  P++  F+ +  G  ++
Sbjct: 282 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKS 341

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
               +A  I   +    + P+ V F  +I+G C A   ++A +++E+M    + P++ T+
Sbjct: 342 DRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTF 401

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             L+ G  +A Q   A ++L +M   GV P   T  ++
Sbjct: 402 GALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVL 439



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 162/338 (47%), Gaps = 13/338 (3%)

Query: 98  TTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
           + + YN +++     G+   +L++ +       V P   TYN ++   C  N +     +
Sbjct: 44  SVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMEL 103

Query: 158 VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
             ++V  G  PD VTYNTL  +  + G+   A ++   M +    PN  T  ++++G CK
Sbjct: 104 FEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCK 163

Query: 218 EGNMEDAMRFLYRM--KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME-----EFG 270
            G +++A   +  M  K  +V PN++ +NS + G           +A  LM         
Sbjct: 164 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLC---KQSMTAEACELMRSLRDGSLR 220

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           V PD VTFST++D     G     +   DDM+  G  P++  ++ L  G  +A + ++A 
Sbjct: 221 VSPDTVTFSTLIDGLCKCGQTD--EACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAH 278

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           +++ SM   GV P+V+ ++ ++  +C A ++  A+ +   M   G  PN+ T+ +++ G 
Sbjct: 279 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGL 338

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQ-LVADSWRA 427
            ++ +   A ++   +  + + P K T   L+A + +A
Sbjct: 339 CKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKA 376



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 147/312 (47%), Gaps = 7/312 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L    K   AH +   ++++G  P +ITY+ LV A  +  R    L L+  +   G 
Sbjct: 265 VNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGC 324

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + FN++I+   +S    EA +I  ++ +    P   T+N LI G    G  E++  
Sbjct: 325 TPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASA 384

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M   KN++P+  T+  L+   C    +E A +++  M   G+ P+ VTYN L    
Sbjct: 385 LFEEMVA-KNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGL 443

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G      + L EM ++   P   T G +V   C+    +DA++ + ++K     P+ 
Sbjct: 444 CKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDT 503

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +N L+ G      S   ++A+T++EE    G +PD  TF+        +G +    E+
Sbjct: 504 VTYNILVDGLW---KSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMEL 560

Query: 298 FDDMVKAGIEPD 309
              ++  G+ PD
Sbjct: 561 LRVVLAKGMLPD 572



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 83/173 (47%), Gaps = 1/173 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+   A  I + +   G  P ++TY  LV  L +  R +     + ++   G  P+
Sbjct: 408 LCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPE 467

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           S+ + +++ A   +   D+A+++  K+K  G  P T TYN L+ G    GK E+++ +L+
Sbjct: 468 SMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLE 527

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
            M   K  +P+  T+           ++     ++  ++A G+ PDA T +++
Sbjct: 528 EMV-GKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSI 579



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 73/142 (51%), Gaps = 6/142 (4%)

Query: 313 FSILAKGYVRAGEPQKAESILTS-MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
           ++I+ +   RAGE  +A  I    M + GV P +V + T+I+G C + ++   M ++E++
Sbjct: 48  YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
            + G +P++ TY TL+    +A     A  L   M  +G  P   T  ++ +    +G  
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167

Query: 432 REAKRVLKSAEEDRQS---MPN 450
            EA+ +++  E  R+S   +PN
Sbjct: 168 DEARELIQ--EMTRKSCDVLPN 187



 Score = 39.7 bits (91), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 20/83 (24%), Positives = 41/83 (49%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P  +TY  LV  L +  + +  ++++ ++   G +PDS  F A       SGN+   
Sbjct: 498 GWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGT 557

Query: 84  MKIFQKMKDSGCKPTTSTYNTLI 106
           M++ + +   G  P  +T ++++
Sbjct: 558 MELLRVVLAKGMLPDATTCSSIL 580


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 210/400 (52%), Gaps = 1/400 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG+ H+A    + ++  G +   + Y TL+  L +    ++ L L+ +V+ + ++P+ ++
Sbjct: 140 KGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVM 199

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +I+   +  +V++A  ++ +M   G  P   TY+ LI G+  VG+ ++++ L   M 
Sbjct: 200 YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMI 259

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            + N+KP+  T+NILV  +C    ++E   V   M+  GI+P+ VTY +L   Y    E 
Sbjct: 260 LE-NIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEV 318

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A+ +L+ M    V P+ ++  I++ G+CK   +++AM     M    + P++V +NSL
Sbjct: 319 NKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSL 378

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G   +       K +  M + GV PD++T+S+I+DA      + K   +   +   GI
Sbjct: 379 IDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGI 438

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+++ ++IL  G  + G  + A +I   +   G +  V  +T +I G+CN      A++
Sbjct: 439 RPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALA 498

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
           +  KM +    P+  TYE ++    +  +  +AE+L +++
Sbjct: 499 LLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLREMI 538



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/471 (23%), Positives = 228/471 (48%), Gaps = 21/471 (4%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM----------- 60
           +A  +F+ L+ +   P  I +  ++ +L + K + ++LSL  ++E +G+           
Sbjct: 59  DAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPH 118

Query: 61  -----KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKP 115
                 P++I F  +I      G + +A+     +   G +     Y TLI G   VG+ 
Sbjct: 119 QLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGET 178

Query: 116 EESLKLLQLMSQDKN-VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYN 174
             +L LL+ +  D N V+PN   Y+ ++   C    + +A+++  +MV+ GI P+ VTY+
Sbjct: 179 RAALDLLRRV--DGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYS 236

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
            L   +   G+   A  +  +M    ++P+  T  I+V G+CK+G M++       M + 
Sbjct: 237 ALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQ 296

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            + PN+V + SL+ G+  +K+ +     L  M + GV PD+ +++ ++D +     + + 
Sbjct: 297 GIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEA 356

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
             +F +M    I PD+  ++ L  G  + G+   A  ++  M   GV P+++ +++++  
Sbjct: 357 MNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDA 416

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C   ++ +A+++  K+ + GI PN+ TY  L+ G  +  +   A  + + +  KG    
Sbjct: 417 LCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNIT 476

Query: 415 KSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKD-EIAVESIHRKQ 464
            +T  ++   +   GL  EA  +L S  +D   +P+    EI + S+  K 
Sbjct: 477 VNTYTVMIHGFCNKGLFDEALALL-SKMKDNSCIPDAVTYEIIIRSLFDKD 526



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 199/427 (46%), Gaps = 29/427 (6%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           FN +     +   I Y+++              SL S++ +    P +I FN ++ +  +
Sbjct: 29  FNFIPYSSSKINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVK 88

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
           S +    + + Q+M+  G  P    +            P       QLM       PN  
Sbjct: 89  SKHYHTVLSLSQQMEFEGINPVLFHFQ----------HPH------QLMGY----HPNTI 128

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           T+  L++  C K  I +A      +VA G Q D V Y TL     + GET  A  +L  +
Sbjct: 129 TFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRV 188

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD- 255
             N V+PN      I+ G CK+ ++ DA      M    + PN+V +++LI GF  +   
Sbjct: 189 DGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQL 248

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D +D    ++ E  +KPDV TF+ ++D +   G M + + +F  M+K GI+P++  +  
Sbjct: 249 KDAIDLFNKMILE-NIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCS 307

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  GY    E  KA+SIL +M + GV+P++  +  +I G+C   K+  AM+++++M    
Sbjct: 308 LMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKH 367

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW-------RAI 428
           I P++ TY +L+ G  +  +   A +L+  M ++GV P   T   + D+        +AI
Sbjct: 368 IIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAI 427

Query: 429 GLAREAK 435
            L  + K
Sbjct: 428 ALLTKLK 434



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 54/108 (50%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L ++G RP + TYT L+  L +  R +   ++   +   G       +  MI+     G 
Sbjct: 433 LKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGL 492

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            DEA+ +  KMKD+ C P   TY  +I+   +  + +++ KL +++++
Sbjct: 493 FDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLREMITR 540


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 215/431 (49%), Gaps = 1/431 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   EA  + +C+  +G +P L TY  L+  L ++  ++    ++ ++   G+ P++  
Sbjct: 272 RGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAAT 331

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           FN M+       +V EA ++F +M   G  P   ++++++  +   G+   +L   + M 
Sbjct: 332 FNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKM- 390

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +   + P+   Y IL+  +C  + +  A  +  +MV  G   D VTYNTL     +    
Sbjct: 391 KGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKML 450

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+++  EM    V P+  T   ++ GYCK+GNM  A+     M    + P++V +N+L
Sbjct: 451 DDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTL 510

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + GF  + + +   +    M    + P  ++FS +++ + S GL+ +   ++D+M + GI
Sbjct: 511 MDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGI 570

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           +P +   + + KGY+RAG   KA   L +M   GV P+ + + T+I+ +       RA  
Sbjct: 571 KPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFF 630

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           +   M E G+ PNL TY  +L G+    +   AE +L  M +KG+ P KST   + + + 
Sbjct: 631 LINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYV 690

Query: 427 AIGLAREAKRV 437
           +    +EA RV
Sbjct: 691 SKDNMKEAFRV 701



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 204/370 (55%), Gaps = 1/370 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +FN +++ G  P LI+++++V   +R       L+   K++  G+ PD++++  +I
Sbjct: 347 EAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILI 406

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N    + +V  A+K+  +M + GC     TYNTL+ G       +++ +L + M + + V
Sbjct: 407 NGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVE-RGV 465

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  T   L+  +C   ++ +A ++   M    ++PD VTYNTL   + + GE  +A++
Sbjct: 466 FPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKE 525

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           + ++M + ++ P+  +  I+++G+C  G + +A R    MKE  + P LV  N++IKG+L
Sbjct: 526 LWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYL 585

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
              +    +  L  M   GV PD +T++T+++++       +   + ++M + G+ P++ 
Sbjct: 586 RAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLV 645

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++ +  G+ R G  Q+AE +L  M   G++P+   +T++I+G+ +   M+ A  ++++M
Sbjct: 646 TYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEM 705

Query: 372 CEIGINPNLK 381
            + G  P+ K
Sbjct: 706 LQRGFVPDDK 715



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 190/391 (48%), Gaps = 5/391 (1%)

Query: 54  KVEKDGMKPDSIL----FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY 109
           KV +D +K  +I+     N M+NA  + G +D       +M++ G      TYNTL+  Y
Sbjct: 210 KVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAY 269

Query: 110 GNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
              G   E+  L+  M+  K +KP   TYN L+   C + S E A  V+ +M+  G+ P+
Sbjct: 270 CRRGLVSEAFGLVDCMA-GKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPN 328

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
           A T+N +     +  + + AE++  EM    V P+  +   IV  + + G +  A+ +  
Sbjct: 329 AATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFE 388

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
           +MK + + P+ V++  LI G+    D  G  K    M E G   DVVT++T+++      
Sbjct: 389 KMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGK 448

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
           ++    E+F +MV+ G+ PD +  + L  GY + G   KA S+  +M    + P+VV + 
Sbjct: 449 MLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYN 508

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
           T++ G+C   +M++A  ++  M    I P+  ++  L+ G+        A  L   M+EK
Sbjct: 509 TLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEK 568

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
           G++P   T   +   +   G   +A   L +
Sbjct: 569 GIKPTLVTCNTIIKGYLRAGNLSKANDFLNT 599



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 180/373 (48%), Gaps = 1/373 (0%)

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           ++F+ +I    ++  + E  + FQ ++  G   + +  N L+     VG  + + K+ + 
Sbjct: 155 VVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYED 214

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
             +  N+  N  T NI+V A C    ++     + +M   G+  D VTYNTL  AY + G
Sbjct: 215 FVKSGNI-VNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
               A  ++  M    ++P   T   +++G CKEG+ E A R L  M  + + PN   FN
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            ++      +D    ++    M + GV PD+++FS+I+  +S  G +G+    F+ M   
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+ PD  +++IL  GY R  +   A  +   M + G   +VV + T+++G C    +  A
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDA 453

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             ++++M E G+ P+  T  TL+ GY +     +A  L + M  + ++P   T   + D 
Sbjct: 454 DELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDG 513

Query: 425 WRAIGLAREAKRV 437
           +  +G   +AK +
Sbjct: 514 FCKVGEMEKAKEL 526



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 114/245 (46%), Gaps = 10/245 (4%)

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +VVF+ LI+ ++  +      +A  L+ + G    +   + ++ A    G +    ++++
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           D VK+G   +++  +I+     + G+       L+ M + GV+ ++V + T+++ +C   
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
            +  A  + + M   G+ P L TY  L+ G  +     RA+ +L  M   G+ P  +T  
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333

Query: 420 -LVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESI----HRKQNLSASNSTFL 474
            ++ +S R   +  EA+RV     + R  +P   D I+  SI     R   L  + + F 
Sbjct: 334 PMLVESCRKEDVW-EAERVFNEMLQ-RGVVP---DLISFSSIVGVFSRNGELGRALAYFE 388

Query: 475 QIPGV 479
           ++ GV
Sbjct: 389 KMKGV 393



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 45/97 (46%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N  V +     A ++ N + E G  P L+TY  ++   +R  R +    ++ K+   G+
Sbjct: 616 INSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGI 675

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKP 97
            PD   + ++IN      N+ EA ++  +M   G  P
Sbjct: 676 NPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVP 712


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 222/437 (50%), Gaps = 1/437 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   EA  + + +  +G +P + TY  ++  L +  ++     ++ ++ K GM
Sbjct: 139 INAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGM 198

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD+  +N ++  C  + N+ +A +IF +M   G  P   +++ LI      G  +++LK
Sbjct: 199 SPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALK 258

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             + M ++  + P++  Y IL+  +C    + EA  V  +M+  G   D VTYNT+    
Sbjct: 259 YFRDM-KNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGL 317

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A+++  EM    V P+  T   +++GY K+GNM  A+     M +  + P++
Sbjct: 318 CKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDV 377

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+LI GF    + + V++    M    + P+ +++  +++ + + G + +   ++D+
Sbjct: 378 VTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDE 437

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ G E  I   + + KGY RAG   KA+  L++M   G+ P+ + + T+I+G+     
Sbjct: 438 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 497

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M RA ++  KM   G+ P++ TY  +L G+    +   AE ++  M E+GV P +ST   
Sbjct: 498 MDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTS 557

Query: 421 VADSWRAIGLAREAKRV 437
           + +        +EA RV
Sbjct: 558 LINGHVTQNNLKEAFRV 574



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 215/422 (50%), Gaps = 1/422 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV  G    A  I+  ++  G +  + T   ++ AL + ++ ++  S +S +E+ G+ PD
Sbjct: 72  LVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPD 131

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +INA    G ++EA ++   M   G KP   TYN +I G    GK   +  +L 
Sbjct: 132 VVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLD 191

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +   + P+  TYNIL+   C  +++ +A  +  +M + G+ PD V+++ L    ++ 
Sbjct: 192 EMLK-IGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKN 250

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G   +A +   +M+N  + P+     I++ G+C+ G M +A++    M E     ++V +
Sbjct: 251 GCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTY 310

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+++ G    K     D+  T M E GV PD  TF+T+++ +S  G M K   +F+ M++
Sbjct: 311 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQ 370

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
             ++PD+  ++ L  G+ +  E +K   +   M    ++PN + +  +I+G+CN   +  
Sbjct: 371 RNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSE 430

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  ++++M E G    + T  T++ GY  A    +A+E L  M  KG+ P   T   + +
Sbjct: 431 AFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 490

Query: 424 SW 425
            +
Sbjct: 491 GF 492



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 197/408 (48%), Gaps = 5/408 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK   A  + + +++ G  P   TY  L+    R         +  ++   G+
Sbjct: 174 INGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGV 233

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + F+A+I   S++G +D+A+K F+ MK++G  P    Y  LI G+   G   E+LK
Sbjct: 234 VPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALK 293

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M +   V  +  TYN ++   C +  + EA  +  +M   G+ PD  T+ TL   Y
Sbjct: 294 VRDEMLEQGCV-LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGY 352

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++ G   +A  +   M    ++P+  T   ++ G+CK   ME        M    ++PN 
Sbjct: 353 SKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNH 412

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +  LI G+ ++       +    M E G +  ++T +TI+  +  AG   K  E   +
Sbjct: 413 ISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSN 472

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  GI PD   ++ L  G+++     +A +++  M   G+ P+V+ +  +++G+    +
Sbjct: 473 MLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGR 532

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGY---GEAKQPWRA-EELLQ 404
           MQ A  I  KM E G+NP+  TY +L+ G+      K+ +R  +E+LQ
Sbjct: 533 MQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQ 580



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 195/370 (52%), Gaps = 1/370 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  IF+ +  +G  P L++++ L+  L++       L     ++  G+ PD++++  +I
Sbjct: 220 DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 279

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                +G + EA+K+  +M + GC     TYNT++ G        E+ +L   M++ + V
Sbjct: 280 GGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTE-RGV 338

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  T+  L+  +    ++ +A  +   M+   ++PD VTYNTL   + +  E  +  +
Sbjct: 339 FPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNE 398

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  +M + ++ PN  + GI+++GYC  G + +A R    M E      ++  N+++KG+ 
Sbjct: 399 LWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYC 458

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
              ++   D+ L+ M   G+ PD +T++T+++ +     M +   + + M  +G+ PD+ 
Sbjct: 459 RAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVI 518

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++++  G+ R G  Q+AE I+  M + GV+P+   +T++I+G      ++ A  ++++M
Sbjct: 519 TYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEM 578

Query: 372 CEIGINPNLK 381
            + G  P+ K
Sbjct: 579 LQRGFVPDDK 588



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 189/385 (49%), Gaps = 9/385 (2%)

Query: 44  RFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYN 103
           R + + SL+      G  P  ++F+ ++    ++  + E  + F+ +K  G   + +  N
Sbjct: 9   RVEIVESLVLTYGNCGSNP--LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACN 66

Query: 104 TLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVA 163
           +L+ G   VG  + + ++ Q + +   V+ N  T NI++ A C    IE   + +  M  
Sbjct: 67  SLLGGLVKVGWVDLAWEIYQEVVR-SGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 125

Query: 164 SGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED 223
            G+ PD VTYNTL  AY + G    A +++  M    ++P   T   I++G CK G    
Sbjct: 126 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 185

Query: 224 AMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFST 280
           A   L  M ++ + P+   +N L+   ++   +D +  A  + +E    GV PD+V+FS 
Sbjct: 186 AKGVLDEMLKIGMSPDTATYNILL---VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 242

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++   S  G + +  + F DM  AG+ PD  +++IL  G+ R G   +A  +   M + G
Sbjct: 243 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 302

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
              +VV + T+++G C    +  A  ++ +M E G+ P+  T+ TL+ GY +     +A 
Sbjct: 303 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAV 362

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSW 425
            L ++M ++ ++P   T   + D +
Sbjct: 363 TLFEMMIQRNLKPDVVTYNTLIDGF 387



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 58/269 (21%), Positives = 123/269 (45%)

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           + + ++ L R Y Q  +     +    +++  +  +   C  ++ G  K G ++ A    
Sbjct: 26  NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
             +    V  N+   N +I      +  +     L+ MEE GV PDVVT++T+++A+   
Sbjct: 86  QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 145

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
           GL+ +  E+ D M   G++P +  ++ +  G  + G+  +A+ +L  M K G+ P+   +
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 205

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
             ++   C    M  A  I+++M   G+ P+L ++  L+    +     +A +  + M+ 
Sbjct: 206 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 265

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRV 437
            G+ P      ++   +   G+  EA +V
Sbjct: 266 AGLAPDNVIYTILIGGFCRNGVMSEALKV 294



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 83/207 (40%), Gaps = 2/207 (0%)

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           + F  ++  +  A  + +  E F  +   G+   I+  + L  G V+ G    A  I   
Sbjct: 28  LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 87

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           + + GV  NV     +I+  C   K++   S    M E G+ P++ TY TL+  Y     
Sbjct: 88  VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 147

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEI 455
              A EL+  M  KG++P   T   + +     G    AK VL    +   S       I
Sbjct: 148 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 207

Query: 456 AVESIHRKQNLSASNSTFLQIP--GVV 480
            +    R  N+  +   F ++P  GVV
Sbjct: 208 LLVECCRNDNMMDAERIFDEMPSQGVV 234


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 212/416 (50%), Gaps = 7/416 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P ++T+  +V A  R    ++ ++LI  +   G+KP  + +N+++     +G  D+A ++
Sbjct: 192 PDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREV 251

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F+ M   G  P   ++N LI G+   G+ EE+L+  + M + + V P+  +++ L+  + 
Sbjct: 252 FRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEM-RGRRVTPDVVSFSCLIGLFT 310

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            +  ++ A   + +M   G+ PD V Y  +   + + G    A ++  EM      P+  
Sbjct: 311 RRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVV 370

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   +++G CKE  + DA   L  MKE  V P+L  F +LI G+   +D + ++KAL   
Sbjct: 371 TYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGY--CRDGN-IEKALQFF 427

Query: 267 EEFG---VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           +      ++PD+VT++T++D     G +GK  E++DDM    I P+   +SIL   +   
Sbjct: 428 DTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEK 487

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+   A + L  M   G+ PN++ + ++I G+C +  + +      KM    + P+L TY
Sbjct: 488 GQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITY 547

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            TL+ GY +  +   A  LL++ME + V+P   T  ++   +   G  +EA  V K
Sbjct: 548 NTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYK 603



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 207/410 (50%), Gaps = 1/410 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A  + + ++ +G +P L+TY +++  L R  R+     +   ++  G+ PD   F
Sbjct: 208 GDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSF 267

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I     +G ++EA++ +++M+     P   +++ LI  +   G+ + + + L+ M +
Sbjct: 268 NMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREM-R 326

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  + P+   Y +++  +C    + EA  V  +MVA G  PD VTYNTL     +     
Sbjct: 327 EFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLS 386

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            AE++L EM+   V P+  T   ++ GYC++GN+E A++F   + +  + P++V +N+LI
Sbjct: 387 DAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLI 446

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G     D    ++    M    + P+ VT+S ++D+    G +       D+MV  GI 
Sbjct: 447 DGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIV 506

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P+I  ++ + KGY R+G   K +  L  MR   V P+++ + T+I G+    KM  A ++
Sbjct: 507 PNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNL 566

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            + M    + P+  TY  ++ G+        A+ + + M  +G+ P + T
Sbjct: 567 LKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYT 616



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 211/437 (48%), Gaps = 1/437 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G PH     +  ++         T   +V +  +  +F  + ++IS++EK  + PD +  
Sbjct: 138 GWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTH 197

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N M++A   +G+V+ AM +   M   G KP   TYN+++KG    G+ +++ ++ + M  
Sbjct: 198 NVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDA 257

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              V P+ R++N+L+  +C    +EEA     +M    + PD V+++ L   + + GE  
Sbjct: 258 -CGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMD 316

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A + L EM+   + P+     +++ G+C+ G M +A+R    M      P++V +N+L+
Sbjct: 317 HAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLL 376

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G    +     ++ L  M+E GV PD+ TF+T++  +   G + K  + FD +    + 
Sbjct: 377 NGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLR 436

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PDI  ++ L  G  R G+  KA  +   M    + PN V ++ +I   C   ++  A + 
Sbjct: 437 PDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAF 496

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
            ++M   GI PN+ TY +++ GY  +    + ++ L  M    V P   T   +   +  
Sbjct: 497 LDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVK 556

Query: 428 IGLAREAKRVLKSAEED 444
            G   EA  +LK  E +
Sbjct: 557 EGKMHEAFNLLKIMENE 573



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 198/413 (47%), Gaps = 7/413 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+  G+  +A  +F  +   G  P + ++  L+    R    +  L    ++    + PD
Sbjct: 239 LLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPD 298

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + F+ +I   +  G +D A +  ++M++ G  P    Y  +I G+   G   E+L++  
Sbjct: 299 VVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRD 358

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M       P+  TYN L+   C +  + +A  ++ +M   G+ PD  T+ TL   Y + 
Sbjct: 359 EMVA-FGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRD 417

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G   +A Q    + + ++RP+  T   ++ G C++G++  A      M   E+ PN V +
Sbjct: 418 GNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTY 477

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + LI       +   VD A   ++E    G+ P+++T+++I+  +  +G + K Q+    
Sbjct: 478 SILIDSHC---EKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPK 534

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M    + PD+  ++ L  GYV+ G+  +A ++L  M    V P+ V +  +ISG+     
Sbjct: 535 MRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGN 594

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           MQ A  +Y+KM   GI P+  TY +++ G+  A    ++ +L   M +KG+ P
Sbjct: 595 MQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAP 647



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 92/385 (23%), Positives = 196/385 (50%), Gaps = 5/385 (1%)

Query: 1   MNILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
            N+L+G     G+  EA   +  +      P +++++ L+   TR+         + ++ 
Sbjct: 267 FNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMR 326

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           + G+ PD +++  +I     +G + EA+++  +M   GC P   TYNTL+ G     +  
Sbjct: 327 EFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLS 386

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           ++ +LL  M +++ V P+  T+  L+  +C   +IE+A      +    ++PD VTYNTL
Sbjct: 387 DAEELLNEM-KERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTL 445

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
                + G+  +A ++  +M + ++ PN  T  I++  +C++G +++A  FL  M    +
Sbjct: 446 IDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGI 505

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            PN++ +NS+IKG+    +     + L  M    V PD++T++T++  +   G M +   
Sbjct: 506 VPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFN 565

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +   M    ++PD   ++++  G+   G  Q+A+ +   M   G+ P+   + ++I+G  
Sbjct: 566 LLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHV 625

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLK 381
            A   +++  ++++M + G+ P+ K
Sbjct: 626 VAGNSKKSFQLHDEMLQKGLAPDDK 650



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/387 (24%), Positives = 180/387 (46%), Gaps = 8/387 (2%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            N M+++  ++    E   +  +M+     P   T+N ++      G  E ++ L+  M 
Sbjct: 162 LNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMV 221

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K +KP   TYN +++        ++A  V   M A G+ PD  ++N L   + + GE 
Sbjct: 222 S-KGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGEL 280

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A +   EM+  +V P+  +   ++  + + G M+ A  +L  M+E  + P+ V++  +
Sbjct: 281 EEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMV 340

Query: 247 IKGFLDIKDSDGVDKALTLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           I GF     +  + +AL + +E   FG  PDVVT++T+++       +   +E+ ++M +
Sbjct: 341 IGGFCR---AGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKE 397

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ PD+  F+ L  GY R G  +KA     ++    + P++V + T+I G C    + +
Sbjct: 398 RGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGK 457

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  +++ M    I PN  TY  L+  + E  Q   A   L  M  KG+ P   T   +  
Sbjct: 458 ANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIK 517

Query: 424 SWRAIGLAREAKRVLKSAEEDRQSMPN 450
            +   G   + ++ L     D+  MP+
Sbjct: 518 GYCRSGNVSKGQQFLPKMRHDK-VMPD 543



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 183/394 (46%), Gaps = 15/394 (3%)

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + I   +  S   P    ++ LI+ Y    KP E+ +  +L+   +   P   +  +L  
Sbjct: 74  LDIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAA 133

Query: 144 ----AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA---QYGETYRAEQMLFEM 196
                W   +   +A+ +V   ++S  + +  T N +  +Y    Q+GE    + ++ EM
Sbjct: 134 LSRAGW--PHLTADAYRLV---LSSNSEVNTYTLNIMVHSYCKTLQFGEV---DTVISEM 185

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
           +   V P+  T  ++V    + G++E AM  +  M    + P LV +NS++KG L     
Sbjct: 186 EKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRW 245

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           D   +    M+  GV PDV +F+ ++  +  AG + +    + +M    + PD+  FS L
Sbjct: 246 DKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCL 305

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
              + R GE   A   L  MR++G+ P+ V++T VI G+C A  M  A+ + ++M   G 
Sbjct: 306 IGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGC 365

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            P++ TY TLL G  + ++   AEELL  M+E+GV P   T   +   +   G   +A +
Sbjct: 366 LPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQ 425

Query: 437 VLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASN 470
              +  + R           ++ + R+ +L  +N
Sbjct: 426 FFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKAN 459


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 212/423 (50%), Gaps = 1/423 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  KG+  EA  + + ++E G +P  +TY  ++  L +       L L  K+E+  +
Sbjct: 182 INGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNI 241

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K   + ++ +I++  + G+ D+A+ +F +M+  G K    TY++LI G  N GK ++  K
Sbjct: 242 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK 301

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+ M   +N+ P+  T++ L+  +  +  + EA  +  +M+  GI PD +TYN+L   +
Sbjct: 302 MLREMIG-RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 360

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +    + A QM   M +    P+  T  I+++ YCK   ++D MR    +    + PN 
Sbjct: 361 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +N+L+ GF      +   +    M   GV P VVT+  ++D     G + K  EIF+ 
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M K+ +   I +++I+  G   A +   A S+  S+   GV P+VV +  +I G C    
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ KM E G  P+  TY  L+  +        + EL++ M+  G     STI++
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKM 600

Query: 421 VAD 423
           V D
Sbjct: 601 VID 603



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 219/440 (49%), Gaps = 1/440 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K ++A  +F  +I+    PT I +  L +A+ R K++  +L     +E +G++ D     
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            MIN       +  A  +  +    G +P T T++TL+ G+   G+  E++ L+  M + 
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K  +P+  T + L+   C K  + EA  ++ +MV  G QPD VTY  +     + G +  
Sbjct: 170 KQ-RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  +  +M+   ++ +     I++   CK+G+ +DA+     M+   +  ++V ++SLI 
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G  +    D   K L  M    + PDVVTFS ++D +   G + + +E++++M+  GI P
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D   ++ L  G+ +     +A  +   M   G  P++V ++ +I+ +C A ++   M ++
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            ++   G+ PN  TY TL+ G+ ++ +   A+EL Q M  +GV P   T  ++ D     
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468

Query: 429 GLAREAKRVLKSAEEDRQSM 448
           G   +A  + +  ++ R ++
Sbjct: 469 GELNKALEIFEKMQKSRMTL 488



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 209/418 (50%), Gaps = 7/418 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  EA  + + ++E   RP L+T +TL+  L  + R    L LI ++ + G +PD + 
Sbjct: 153 EGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVT 212

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +  ++N   +SGN   A+ +F+KM++   K +   Y+ +I      G  +++L L   M 
Sbjct: 213 YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME 272

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K +K +  TY+ L+   C+    ++   ++ +M+   I PD VT++ L   + + G+ 
Sbjct: 273 M-KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+++  EM    + P+  T   ++ G+CKE  + +A +    M      P++V ++ L
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           I  +   K    VD  + L  E    G+ P+ +T++T++  +  +G +   +E+F +MV 
Sbjct: 392 INSYCKAKR---VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ P +  + IL  G    GE  KA  I   M+K  +   + ++  +I G CNA K+  
Sbjct: 449 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD 508

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           A S++  + + G+ P++ TY  ++ G  +      A+ L + M+E G  P   T  ++
Sbjct: 509 AWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNIL 566



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 205/421 (48%), Gaps = 1/421 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G+ P  IT++TLV     + R    ++L+ ++ +   +PD +  + +IN     G V EA
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +  +M + G +P   TY  ++      G    +L L + M +++N+K +   Y+I++ 
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM-EERNIKASVVQYSIVID 253

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C   S ++A ++  +M   GI+ D VTY++L       G+     +ML EM    + P
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   ++  + KEG + +A      M    + P+ + +NSLI GF         ++  
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            LM   G +PD+VT+S +++++  A  +     +F ++   G+ P+   ++ L  G+ ++
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+   A+ +   M   GV P+VV +  ++ G C+  ++ +A+ I+EKM +  +   +  Y
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             ++ G   A +   A  L   + +KGV+P   T  ++       G   EA  + +  +E
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553

Query: 444 D 444
           D
Sbjct: 554 D 554



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 108/232 (46%), Gaps = 9/232 (3%)

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG----LMGKCQEIFDDM 301
           L  G +DIK +D +D   ++++   + P  + F+ +  A +       ++G C+     M
Sbjct: 42  LRNGIVDIKVNDAIDLFESMIQSRPL-PTPIDFNRLCSAVARTKQYDLVLGFCK----GM 96

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
              GIE D++  +I+   Y R  +   A S+L    K G  P+ + F+T+++G+C   ++
Sbjct: 97  ELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRV 156

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             A+++ ++M E+   P+L T  TL+ G     +   A  L+  M E G +P + T   V
Sbjct: 157 SEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPV 216

Query: 422 ADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF 473
            +     G +  A  + +  EE        +  I ++S+ +  +   + S F
Sbjct: 217 LNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF 268


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 212/423 (50%), Gaps = 1/423 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  KG+  EA  + + ++E G +P  +TY  ++  L +       L L  K+E+  +
Sbjct: 211 INGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNI 270

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K   + ++ +I++  + G+ D+A+ +F +M+  G K    TY++LI G  N GK ++  K
Sbjct: 271 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK 330

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+ M   +N+ P+  T++ L+  +  +  + EA  +  +M+  GI PD +TYN+L   +
Sbjct: 331 MLREMIG-RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 389

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +    + A QM   M +    P+  T  I+++ YCK   ++D MR    +    + PN 
Sbjct: 390 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 449

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +N+L+ GF      +   +    M   GV P VVT+  ++D     G + K  EIF+ 
Sbjct: 450 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 509

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M K+ +   I +++I+  G   A +   A S+  S+   GV P+VV +  +I G C    
Sbjct: 510 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 569

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ KM E G  P+  TY  L+  +        + EL++ M+  G     STI++
Sbjct: 570 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKM 629

Query: 421 VAD 423
           V D
Sbjct: 630 VID 632



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 219/440 (49%), Gaps = 1/440 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K ++A  +F  +I+    PT I +  L +A+ R K++  +L     +E +G++ D     
Sbjct: 79  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            MIN       +  A  +  +    G +P T T++TL+ G+   G+  E++ L+  M + 
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K  +P+  T + L+   C K  + EA  ++ +MV  G QPD VTY  +     + G +  
Sbjct: 199 KQ-RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 257

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  +  +M+   ++ +     I++   CK+G+ +DA+     M+   +  ++V ++SLI 
Sbjct: 258 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 317

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G  +    D   K L  M    + PDVVTFS ++D +   G + + +E++++M+  GI P
Sbjct: 318 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 377

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D   ++ L  G+ +     +A  +   M   G  P++V ++ +I+ +C A ++   M ++
Sbjct: 378 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 437

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            ++   G+ PN  TY TL+ G+ ++ +   A+EL Q M  +GV P   T  ++ D     
Sbjct: 438 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 497

Query: 429 GLAREAKRVLKSAEEDRQSM 448
           G   +A  + +  ++ R ++
Sbjct: 498 GELNKALEIFEKMQKSRMTL 517



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 209/418 (50%), Gaps = 7/418 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  EA  + + ++E   RP L+T +TL+  L  + R    L LI ++ + G +PD + 
Sbjct: 182 EGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVT 241

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +  ++N   +SGN   A+ +F+KM++   K +   Y+ +I      G  +++L L   M 
Sbjct: 242 YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME 301

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K +K +  TY+ L+   C+    ++   ++ +M+   I PD VT++ L   + + G+ 
Sbjct: 302 M-KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 360

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+++  EM    + P+  T   ++ G+CKE  + +A +    M      P++V ++ L
Sbjct: 361 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 420

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           I  +   K    VD  + L  E    G+ P+ +T++T++  +  +G +   +E+F +MV 
Sbjct: 421 INSYCKAKR---VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 477

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ P +  + IL  G    GE  KA  I   M+K  +   + ++  +I G CNA K+  
Sbjct: 478 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD 537

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           A S++  + + G+ P++ TY  ++ G  +      A+ L + M+E G  P   T  ++
Sbjct: 538 AWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNIL 595



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 205/421 (48%), Gaps = 1/421 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G+ P  IT++TLV     + R    ++L+ ++ +   +PD +  + +IN     G V EA
Sbjct: 164 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 223

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +  +M + G +P   TY  ++      G    +L L + M +++N+K +   Y+I++ 
Sbjct: 224 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM-EERNIKASVVQYSIVID 282

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C   S ++A ++  +M   GI+ D VTY++L       G+     +ML EM    + P
Sbjct: 283 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 342

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   ++  + KEG + +A      M    + P+ + +NSLI GF         ++  
Sbjct: 343 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 402

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            LM   G +PD+VT+S +++++  A  +     +F ++   G+ P+   ++ L  G+ ++
Sbjct: 403 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 462

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+   A+ +   M   GV P+VV +  ++ G C+  ++ +A+ I+EKM +  +   +  Y
Sbjct: 463 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 522

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             ++ G   A +   A  L   + +KGV+P   T  ++       G   EA  + +  +E
Sbjct: 523 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 582

Query: 444 D 444
           D
Sbjct: 583 D 583



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 108/232 (46%), Gaps = 9/232 (3%)

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG----LMGKCQEIFDDM 301
           L  G +DIK +D +D   ++++   + P  + F+ +  A +       ++G C+     M
Sbjct: 71  LRNGIVDIKVNDAIDLFESMIQSRPL-PTPIDFNRLCSAVARTKQYDLVLGFCK----GM 125

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
              GIE D++  +I+   Y R  +   A S+L    K G  P+ + F+T+++G+C   ++
Sbjct: 126 ELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRV 185

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             A+++ ++M E+   P+L T  TL+ G     +   A  L+  M E G +P + T   V
Sbjct: 186 SEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPV 245

Query: 422 ADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF 473
            +     G +  A  + +  EE        +  I ++S+ +  +   + S F
Sbjct: 246 LNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF 297


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 196/390 (50%), Gaps = 1/390 (0%)

Query: 28  TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIF 87
           T+ T+  +V  L ++ + K     I  +E  G KP+ + +N +I+  S  GN++ A +I 
Sbjct: 226 TVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRIL 285

Query: 88  QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
             M+  G +P + TY +LI G    G+ EE+  L   M +   V PN  TYN L+  +C+
Sbjct: 286 DAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLV-PNAVTYNTLIDGYCN 344

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
           K  +E A++   +MV  GI P   TYN L  A    G    A+ M+ EM+   + P+  T
Sbjct: 345 KGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAIT 404

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
             I+++GY + GN + A      M    + P  V + SLI            D     + 
Sbjct: 405 YNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKIL 464

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
           + GV PDV+ F+ ++D   + G + +   +  +M +  + PD   F+ L +G  R G+ +
Sbjct: 465 DQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVE 524

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           +A  +L  M++ G+ P+ + + T+ISG+     ++ A  + ++M  IG NP L TY  L+
Sbjct: 525 EARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALI 584

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
               + ++   AEELL+ M  KG+ P  ST
Sbjct: 585 KCLCKNQEGDLAEELLKEMVNKGISPDDST 614



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 201/394 (51%), Gaps = 7/394 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+L  +GK  +A      +   G +P +++Y T++   + +   +    ++  +   G+
Sbjct: 234 VNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGI 293

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PDS  + ++I+   + G ++EA  +F KM + G  P   TYNTLI GY N G  E +  
Sbjct: 294 EPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFS 353

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M + K + P+  TYN+LV A   +  + EA +++ +M   GI PDA+TYN L   Y
Sbjct: 354 YRDEMVK-KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGY 412

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++ G   +A  +  EM +  + P   T   ++    +   M++A     ++ +  V P++
Sbjct: 413 SRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDV 472

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           ++FN+++ G      +  V++A  L++E     V PD VTF+T+M      G + + + +
Sbjct: 473 IMFNAMVDGHC---ANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARML 529

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            D+M + GI+PD   ++ L  GY R G+ + A  +   M   G +P ++ +  +I   C 
Sbjct: 530 LDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCK 589

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
             +   A  + ++M   GI+P+  TY +L+ G G
Sbjct: 590 NQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMG 623



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 192/378 (50%), Gaps = 7/378 (1%)

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           SI+F+ ++  C E    DEA K F  MK+ G  P   T N ++  +  + + E +  L  
Sbjct: 157 SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYA 216

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + + +     T+NI+V   C +  +++A   +  M   G +P+ V+YNT+   Y+  
Sbjct: 217 EMFRLR-ISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 275

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A ++L  M+   + P+  T G ++SG CKEG +E+A     +M E+ + PN V +
Sbjct: 276 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 335

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N+LI G+ +  D   +++A +  +E    G+ P V T++ ++ A    G MG+  ++  +
Sbjct: 336 NTLIDGYCNKGD---LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKE 392

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M K GI PD   ++IL  GY R G  +KA  +   M   G+ P  V +T++I       +
Sbjct: 393 MRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 452

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ A  ++EK+ + G++P++  +  ++ G+       RA  LL+ M+ K V P + T   
Sbjct: 453 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 512

Query: 421 VADSWRAIGLAREAKRVL 438
           +       G   EA+ +L
Sbjct: 513 LMQGRCREGKVEEARMLL 530



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 103/429 (24%), Positives = 195/429 (45%), Gaps = 36/429 (8%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +  EA   F  + E+G  P + T   +++   +  R +    L +++ +  +      FN
Sbjct: 172 RADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFN 231

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            M+N   + G + +A +    M+  G KP   +YNT+I GY + G  E + ++L  M + 
Sbjct: 232 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM-RV 290

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K ++P+  TY  L+   C +  +EEA  +  KMV  G+ P+AVTYNTL            
Sbjct: 291 KGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL------------ 338

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
                                  + GYC +G++E A  +   M +  + P++  +N L+ 
Sbjct: 339 -----------------------IDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVH 375

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
                      D  +  M + G+ PD +T++ +++ +S  G   K  ++ ++M+  GIEP
Sbjct: 376 ALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEP 435

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
               ++ L     R    ++A+ +   +   GV P+V+MF  ++ G C    ++RA  + 
Sbjct: 436 THVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLL 495

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           ++M    + P+  T+ TL+ G     +   A  LL  M+ +G++P   +   +   +   
Sbjct: 496 KEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRR 555

Query: 429 GLAREAKRV 437
           G  ++A RV
Sbjct: 556 GDIKDAFRV 564



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/371 (23%), Positives = 165/371 (44%), Gaps = 39/371 (10%)

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           +S+D+    +   +++LVR  C     +EA+   Y M   GI P   T N +   + +  
Sbjct: 147 LSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLN 206

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
               A  +  EM   ++     T  I+V+  CKEG ++ A  F+  M+ L   PN+V +N
Sbjct: 207 RMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYN 266

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           ++I G+    + +G  + L  M   G++PD  T+ +++      G + +   +FD MV+ 
Sbjct: 267 TIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI 326

Query: 305 GIEPDIHVFSILAKGYVRAGEPQK-----------------------------------A 329
           G+ P+   ++ L  GY   G+ ++                                   A
Sbjct: 327 GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEA 386

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           + ++  MRK G+ P+ + +  +I+G+      ++A  ++ +M   GI P   TY +L++ 
Sbjct: 387 DDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYV 446

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMP 449
                +   A++L + + ++GV P       + D   A G    A  +LK  E DR+S+P
Sbjct: 447 LSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLK--EMDRKSVP 504

Query: 450 NKKDEIAVESI 460
              DE+   ++
Sbjct: 505 --PDEVTFNTL 513



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 55/106 (51%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  EA  + + +   G +P  I+Y TL++   R+   K    +  ++   G  P  + 
Sbjct: 520 EGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLT 579

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNV 112
           +NA+I    ++   D A ++ ++M + G  P  STY +LI+G GNV
Sbjct: 580 YNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 625


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/474 (27%), Positives = 225/474 (47%), Gaps = 36/474 (7%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +NIL  KGK  EA  I + + +    P + TYT+L+    R +       +  ++ K+G 
Sbjct: 205 INILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGC 264

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+S+ ++ +IN     G VDEA+ + ++M + G +PT  TY   I     +   EE+++
Sbjct: 265 DPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIE 324

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L+  M + +  +PN +TY  L+        +E A  + +KM+  G+ P+ VTYN L    
Sbjct: 325 LVARMKK-RGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINEL 383

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A ++   M+ +    N +T   I+ G C  G++E AM    +M ++   P +
Sbjct: 384 CVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTV 443

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+LI G+L   + +   + L LM+E G +PD  T++ ++  +S  G +      F +
Sbjct: 444 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 503

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH------------------ 342
           MV+ G+ P+   ++ L  G+ + G+   A S+L  M + G +                  
Sbjct: 504 MVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENR 563

Query: 343 -----------------PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
                            PNV+ +TT+I G C   + Q A  I+  M +    PNL TY +
Sbjct: 564 FSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSS 623

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           L++G  +  +   AE LL+ ME KG+ P + T   + D +  +G    A  +L+
Sbjct: 624 LIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLR 677



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 196/368 (53%), Gaps = 1/368 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           + G RP + TYT L++ L+R  + +  + L  K+ K+G+ P+++ +NA+IN     G   
Sbjct: 331 KRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFS 390

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
            A+KIF  M+  G    T TYN +IKG    G  E+++ L + M +   + P   TYN L
Sbjct: 391 TALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL-PTVVTYNTL 449

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +  + +K ++  A  ++  M  +G +PD  TYN L   ++++G+   A     EM    +
Sbjct: 450 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            PN  +   ++ G+ K+G ++ A+  L RM+E+  +PN+  +N++I G          +K
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
               M E G+ P+V+T++T++D     G      +IF DM K    P+++ +S L  G  
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 629

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           + G+  +AE +L  M + G+ P+ V FT++I G+    ++  A  +  +M ++G  PN +
Sbjct: 630 QEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYR 689

Query: 382 TYETLLWG 389
           TY  LL G
Sbjct: 690 TYSVLLKG 697



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 220/439 (50%), Gaps = 9/439 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  EA  +   +IE+G  PT+ TYT  + AL   +  +  + L+++++K G 
Sbjct: 275 INGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGC 334

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+   + A+I+  S  G ++ A+ ++ KM   G  P T TYN LI      G+   +LK
Sbjct: 335 RPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALK 394

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M    ++  N +TYN +++  C    IE+A  +  KM+  G  P  VTYNTL   Y
Sbjct: 395 IFHWMEGHGSLA-NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGY 453

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A ++L  M+ N   P+E T   +VSG+ K G +E A  +   M E  ++PN 
Sbjct: 454 LTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNP 513

Query: 241 VVFNSLIKGFLDIKDSDG-VDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           V + +LI G       DG VD AL+L   MEE G  P+V +++ +++  S      + ++
Sbjct: 514 VSYTALIDG----HSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           I D MV+ G+ P++  ++ L  G  R G  Q A  I   M K    PN+  ++++I G C
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 629

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
              K   A  + ++M   G+ P+  T+ +L+ G+    +   A  LL+ M + G +P   
Sbjct: 630 QEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYR 689

Query: 417 TIQLVADSWRAIGLAREAK 435
           T  ++    +   L  E K
Sbjct: 690 TYSVLLKGLQKECLLLEEK 708



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 226/441 (51%), Gaps = 8/441 (1%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  ++  ++  G +P+L+T+ TL+  L+++ + +    ++S++ +  + PD   + ++I 
Sbjct: 182 ARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLIL 241

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
               + N+D A  +F +M   GC P + TY+TLI G  N G+ +E+L +L+ M + K ++
Sbjct: 242 GHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIE-KGIE 300

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P   TY + + A C+    EEA  +V +M   G +P+  TY  L    ++ G+   A  +
Sbjct: 301 PTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGL 360

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             +M    + PN  T   +++  C  G    A++  + M+      N   +N +IKG   
Sbjct: 361 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCL 420

Query: 253 IKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
             D   ++KA+ L E+    G  P VVT++T+++ + + G +     + D M + G EPD
Sbjct: 421 GGD---IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPD 477

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
              ++ L  G+ + G+ + A      M + G++PN V +T +I G     K+  A+S+ +
Sbjct: 478 EWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLK 537

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           +M E+G NPN+++Y  ++ G  +  +   AE++   M E+G+ P   T   + D     G
Sbjct: 538 RMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNG 597

Query: 430 LAREAKRVLKSAEEDRQSMPN 450
             + A ++    E+ R+ +PN
Sbjct: 598 RTQFAFKIFHDMEK-RKCLPN 617



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 170/384 (44%), Gaps = 38/384 (9%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           ++ A   ++  + +   ++++   G        N ++   ++   V+ A  ++++M +SG
Sbjct: 134 MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG 193

Query: 95  CKPTTSTYNTLIKGYGNVGKPEES-LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
            +P+  T+NTLI      GK  E+ L L Q+   D  + P+  TY  L+   C   +++ 
Sbjct: 194 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYD--LSPDVFTYTSLILGHCRNRNLDL 251

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A+ V  +MV  G  P++VTY+TL                                   ++
Sbjct: 252 AFGVFDRMVKEGCDPNSVTYSTL-----------------------------------IN 276

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
           G C EG +++A+  L  M E  + P +  +   I     I+  +   + +  M++ G +P
Sbjct: 277 GLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRP 336

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           +V T++ ++   S  G +     ++  M+K G+ P+   ++ L       G    A  I 
Sbjct: 337 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF 396

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M  +G   N   +  +I G C    +++AM ++EKM ++G  P + TY TL+ GY   
Sbjct: 397 HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK 456

Query: 394 KQPWRAEELLQVMEEKGVRPKKST 417
                A  LL +M+E G  P + T
Sbjct: 457 GNVNNAARLLDLMKENGCEPDEWT 480


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 211/414 (50%), Gaps = 7/414 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L  KG+  ++ +  + ++ +G +   ++Y TL+  L +    +S L L+  +E    
Sbjct: 87  MKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRST 146

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ +++N +I+   +   V+EA  ++ +M   G  P   TY+TLI G+   G+  E+  
Sbjct: 147 RPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFG 206

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M   KN+ PN  TY IL+ A C +  ++EA N++  M   G++P+ V+YNTL   Y
Sbjct: 207 LLNEMIL-KNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGY 265

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              GE   A+QM   M    V PN  +  I++   CK   +++AM  L  +    + PN 
Sbjct: 266 CLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNT 325

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V ++SLI GF  +     +  AL L++E    G   DVVT+++++DA      + K   +
Sbjct: 326 VTYSSLIDGFCKLGR---ITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATAL 382

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F  M + GI+P+ + ++ L  G  + G  + A+ +   +   G   NV  +  +ISG C 
Sbjct: 383 FMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCK 442

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
              +  A+++  KM E G  P+  T+E ++    E  Q  +AE+LL  M  K +
Sbjct: 443 EGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDL 496



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/442 (26%), Positives = 214/442 (48%), Gaps = 3/442 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  P L T   L+       +     +++ K+ K G +P++I  N ++      G V +
Sbjct: 39  KGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKK 98

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           ++    K+   G +    +Y TL+ G   +G+   +LKLL+ M +D++ +PN   YN ++
Sbjct: 99  SLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLR-MIEDRSTRPNVVMYNTII 157

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
              C    + EA+++  +M A GI P+ +TY+TL   +   G+   A  +L EM    + 
Sbjct: 158 DGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNIN 217

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           PN  T  I++   CKEG +++A   L  M +  V PN+V +N+L+ G+  I +     + 
Sbjct: 218 PNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQM 277

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              M + GV P+V +++ ++D    +  + +   +  +++   + P+   +S L  G+ +
Sbjct: 278 FHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCK 337

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G    A  +L  M   G   +VV +T+++   C    + +A +++ KM E GI PN  T
Sbjct: 338 LGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYT 397

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           Y  L+ G  +  +   A++L Q +  KG R    T  ++       G+  EA   +KS  
Sbjct: 398 YTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEA-LAMKSKM 456

Query: 443 EDRQSMPNKKD-EIAVESIHRK 463
           E+   +P+    EI + S+  K
Sbjct: 457 EENGCIPDAVTFEIIIRSLFEK 478



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/411 (22%), Positives = 185/411 (45%), Gaps = 6/411 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+   A  +   + +   RP ++ Y T++  L + K       L S+++  G+
Sbjct: 122 LNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGI 181

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I ++ +I     +G + EA  +  +M      P   TY  L+      GK +E+  
Sbjct: 182 FPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKN 241

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL +M+++  VKPN  +YN L+  +C    ++ A  + + MV  G+ P+  +YN +    
Sbjct: 242 LLAVMTKE-GVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRL 300

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A  +L E+ +  + PN  T   ++ G+CK G +  A+  L  M       ++
Sbjct: 301 CKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADV 360

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V + SL+      ++ D        M+E G++P+  T++ ++D     G     Q++F  
Sbjct: 361 VTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQH 420

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           ++  G   ++  ++++  G  + G   +A ++ + M + G  P+ V F  +I       +
Sbjct: 421 LLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQ 480

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
             +A    EK+    I  +L  +     G     +  +AE+LL  M  KG+
Sbjct: 481 NDKA----EKLLHEMIAKDLLRFRD-FHGERSPNENDKAEKLLHEMIAKGL 526



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 151/318 (47%), Gaps = 1/318 (0%)

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P    +N +V +         A ++  +M   GI+PD  T N L   +   G+   +  +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           L ++     +PN  T   ++ G C +G ++ ++ F  ++       + V + +L+ G   
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           I ++    K L ++E+   +P+VV ++TI+D      L+ +  +++ +M   GI P++  
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           +S L  G+  AG+  +A  +L  M    ++PNV  +T ++   C   K++ A ++   M 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
           + G+ PN+ +Y TL+ GY    +   A+++   M +KGV P   +  ++ D         
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 433 EAKRVLKSAEEDRQSMPN 450
           EA  +L+     +  +PN
Sbjct: 308 EAMNLLREVLH-KNMVPN 324


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 208/438 (47%), Gaps = 12/438 (2%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NILV       +  +A  +F  L   G +P   TYTT++  L   +R +   +   +   
Sbjct: 303 NILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEA-- 360

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
                D I +  +I   ++S  +DEA ++F+K+K +GC P    Y  +I G    G+ E+
Sbjct: 361 ----LDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIED 416

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
            LK  + MS    V P   TY +++   C    + +A  V  +MV  G  PD +TY TL 
Sbjct: 417 GLKNFEDMSGSSCV-PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLI 475

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
             +++  +   A ++L  M      P   T G IV G+CK   + +A   + +M+E    
Sbjct: 476 DGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCE 535

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P L +F SL+  +L    ++   + LT M   G  PDV+ +++++D   S G + + + +
Sbjct: 536 PGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHV 595

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           FD M++ G  PD   +  + + + + G  + A  IL  M K GV P+   + +++ G+  
Sbjct: 596 FDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVK 655

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG-VRPKKS 416
             ++ +A  +Y++M   GI PN  T+  L+ G  +  +  RA  L + M EK  V P   
Sbjct: 656 LERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLV 715

Query: 417 TIQLVADSWRAIGLAREA 434
           +  ++ D     G   EA
Sbjct: 716 SYTILIDGLGKAGRVSEA 733



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 209/436 (47%), Gaps = 8/436 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+P   H + N  ++   RP +  YT+++    +     +   ++ ++   G  PD+  +
Sbjct: 104 GQPQVGHMLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAY 162

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+   + G VDEA ++F++M+ SGC     T+ TLI+   N GK +E+ +L + M +
Sbjct: 163 FVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIE 222

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            +  +P     + L+ A C    ++EA  +   +VA  +    V YN+L   Y + G   
Sbjct: 223 -RGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVD 281

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
              ++L +M      P+ +T  I+V+G+ +   ++DA+     +      PN   + ++I
Sbjct: 282 DGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTII 341

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           +G   + D+  +++A    +E     DV++++T++   + +  + +  E+F+ +  AG  
Sbjct: 342 QG---LYDAQRMEEAKAFFDE---ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCS 395

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P++  ++ +  G ++AG  +        M      P    +T VI G C A  +  A  +
Sbjct: 396 PNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKV 455

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           +E+M + G  P+  TY TL+ G+ +A +   A +LL VM  KG  P   T   +   +  
Sbjct: 456 FEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCK 515

Query: 428 IGLAREAKRVLKSAEE 443
           + +  EAK V+    E
Sbjct: 516 LDMINEAKEVIAQMRE 531



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 199/412 (48%), Gaps = 2/412 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT  TYT ++  L + +       +  ++ + G  PD+I +  +I+  S++  +DEA K+
Sbjct: 431 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 490

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
              M   G +PT  TY +++ G+  +    E+ +++  M +++  +P    +  L+  + 
Sbjct: 491 LDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQM-RERGCEPGLFIFTSLLSYYL 549

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           SK   EEA+ V+ +M A G  PD + Y +L       G    A  +   M      P+  
Sbjct: 550 SKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDAL 609

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T G I+  + K GN+E A   L  M +  V P+   +NSL+ G++ ++  D        M
Sbjct: 610 TYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRM 669

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV-KAGIEPDIHVFSILAKGYVRAGE 325
              G+KP+ VTF+ +M      G   +   +F +M+ K  + P +  ++IL  G  +AG 
Sbjct: 670 VASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGR 729

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A S    M   G+ P    +T++I     A ++  A  + E M ++G+NP+++ Y  
Sbjct: 730 VSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSA 789

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           L+ G  ++     A ++ Q M ++G  P + T +++   +RA G A + + V
Sbjct: 790 LITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAV 841



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 201/398 (50%), Gaps = 10/398 (2%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F  ++++G  P  ITYTTL+   ++  +      L+  +   G +P ++ + +++
Sbjct: 451 DACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIV 510

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   +   ++EA ++  +M++ GC+P    + +L+  Y + G+ EE+ ++L  M+  +  
Sbjct: 511 HGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTA-RGC 569

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+   Y  L+    S   + EA +V   M+  G  PDA+TY T+ + +++ G    A +
Sbjct: 570 APDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGE 629

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L  M  + V P+      ++ GY K   ++ A     RM    + PN V FN L+ G  
Sbjct: 630 ILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLF 689

Query: 252 DIKDSDG-VDKALTLMEEF----GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
                DG  D+A +L +E      V P +V+++ ++D    AG + +    F +M+  GI
Sbjct: 690 ----KDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGI 745

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+ H ++ L     +AG   +A+ ++  M K GV+P+V  ++ +I+G  ++  +  A  
Sbjct: 746 IPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWD 805

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
           ++++M + G  PN  TY+ L  G+  A +    E + Q
Sbjct: 806 VFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQ 843



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/451 (22%), Positives = 198/451 (43%), Gaps = 30/451 (6%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK  EA  ++  +IE G+ P L    +L+ AL +  +      +   V    +   
Sbjct: 204 LSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATS 263

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N++++   + G VD+ +K+  +M +    P   TYN L+ G+    + +++L+L +
Sbjct: 264 RVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFK 323

Query: 124 LMSQDKNVKPNDRTYNIL-----------------------------VRAWCSKNSIEEA 154
           L+S     KPN  TY  +                             ++       I+EA
Sbjct: 324 LLSS-YGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEA 382

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
             +  K+  +G  P+ V Y  +     + G      +   +M  +   P   T  +++ G
Sbjct: 383 CELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDG 442

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
            CK   + DA +   +M +    P+ + + +LI GF      D   K L +M   G +P 
Sbjct: 443 LCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPT 502

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
            VT+ +I+  +    ++ + +E+   M + G EP + +F+ L   Y+  G  ++A  +LT
Sbjct: 503 AVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLT 562

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            M   G  P+V+++T++I    +  ++  A  +++ M E G  P+  TY T++  + +  
Sbjct: 563 EMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIG 622

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
               A E+L++M + GV P       + D +
Sbjct: 623 NVEAAGEILELMAKSGVGPDCFAYNSLMDGY 653



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 163/323 (50%), Gaps = 2/323 (0%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           +EA  +   + E G  P L  +T+L++    + R +    +++++   G  PD IL+ ++
Sbjct: 520 NEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSL 579

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           I+    +G V EA  +F  M + GC P   TY T+I+ +  +G  E + ++L+LM++   
Sbjct: 580 IDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAK-SG 638

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           V P+   YN L+  +     +++A+ V  +MVASGI+P+AVT+N L     + G+T RA 
Sbjct: 639 VGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAF 698

Query: 191 QMLFEM-QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
            +  EM + ++V P   +  I++ G  K G + +A      M +  + P    + SLI  
Sbjct: 699 SLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYS 758

Query: 250 FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
                      K +  M + GV PDV  +S ++     + ++    ++F +M+K G  P+
Sbjct: 759 LAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPN 818

Query: 310 IHVFSILAKGYVRAGEPQKAESI 332
              + +L +G+  AG     E++
Sbjct: 819 EVTYKVLRRGFRAAGRALDLEAV 841



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 104/466 (22%), Positives = 202/466 (43%), Gaps = 17/466 (3%)

Query: 17  FNCLIE---EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA 73
            +CL E    G  P ++    ++  L + ++    + L  ++   G +P  + +N +I+ 
Sbjct: 5   LDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISG 64

Query: 74  CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP 133
            +    +DEA K F  M D+GC+P    + TLI G+   G+P+    LL      K  +P
Sbjct: 65  LASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLN--QALKRFRP 122

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           +   Y  ++  +C    ++  + ++ +M+A+G  PDA  Y  L     + G    A ++ 
Sbjct: 123 DVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELF 182

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
             M+ +    +  T   ++      G +++A      M E    P L V +SLI      
Sbjct: 183 ERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKA 242

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
              D  ++    +    V    V ++++MD +   G +    ++   MV+    PDI  +
Sbjct: 243 GKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTY 302

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           +IL  G+ RA     A  +   +  YG  PN   +TT+I G  +A +M+ A + +++  +
Sbjct: 303 NILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALD 362

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
           +       +Y T++ G  ++K+   A EL + ++  G  P       V D     G   +
Sbjct: 363 V------ISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIED 416

Query: 434 AKRVLKSAEEDRQS--MPNKKD-EIAVESIHRKQNLSASNSTFLQI 476
               LK+ E+   S  +P +    + ++ + + Q L  +   F Q+
Sbjct: 417 G---LKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQM 459



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 124/250 (49%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L   G+  EA ++F+ +IE+G  P  +TY T++   ++    ++   ++  + K G+
Sbjct: 580 IDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGV 639

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +N++++   +   VD+A  ++ +M  SG KP   T+N L+ G    GK + +  
Sbjct: 640 GPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFS 699

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M +   V P   +Y IL+        + EA++   +M+  GI P+  TY +L  + 
Sbjct: 700 LFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSL 759

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+ G    A++++ +M    V P+ +    +++G      ++ A      M +    PN 
Sbjct: 760 AKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNE 819

Query: 241 VVFNSLIKGF 250
           V +  L +GF
Sbjct: 820 VTYKVLRRGF 829



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 137/293 (46%), Gaps = 8/293 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++  + KG+  EA+ +   +   G  P +I YT+L+  L    R      +   + + G 
Sbjct: 545 LSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGC 604

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD++ +  +I   S+ GNV+ A +I + M  SG  P    YN+L+ GY  + + +++  
Sbjct: 605 APDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFG 664

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG-IQPDAVTYNTLARA 179
           +   M     +KPN  T+N+L+         + A+++  +M+    + P  V+Y  L   
Sbjct: 665 VYDRMVA-SGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDG 723

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G    A     EM +  + P   T   ++    K G + +A + +  M +L V+P+
Sbjct: 724 LGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPD 783

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAG 289
           +  +++LI G +   DS  VD A  + +E    G  P+ VT+  +   + +AG
Sbjct: 784 VQAYSALITGLI---DSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 833



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 59/120 (49%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA   F  +I+ G  P   TYT+L+ +L +  R      L+  + K G+ PD   +
Sbjct: 728 GRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAY 787

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +A+I    +S  VD A  +FQ+M   GC P   TY  L +G+   G+  +   + Q  SQ
Sbjct: 788 SALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQ 847


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 207/394 (52%), Gaps = 7/394 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G+ P  +T  +LV    R+ R    +SL+ K+ + G +PD + +NA+I++  ++  
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRR 205

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V++A+  F+++   G +P   TY  L+ G  N G+  ++ +LL+ M + K + PN  TY+
Sbjct: 206 VNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRK-ITPNVITYS 264

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+ A+     + EA  +  +MV   I PD VTY++L      +     A QM   M + 
Sbjct: 265 ALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+  +   +++G+CK   +ED M+   +M +  +  N V +N+LI+GF  + D D  
Sbjct: 325 GCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKA 384

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            +  + M+ FGV PD+ T++ ++      GL+ K   IF+DM K+ ++ DI  ++ + +G
Sbjct: 385 QEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQG 444

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             + G+ + A  +  S+   G+ P++V +TT++SG C         ++Y KM + G+   
Sbjct: 445 MCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGL--- 501

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           +K    L  G G+      + EL++ M   G  P
Sbjct: 502 MKNDSMLCLGDGDITI---SAELIKKMLSCGYAP 532



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/427 (23%), Positives = 209/427 (48%), Gaps = 1/427 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K H+A  +F  +++    P+++ +  L++A+ + K++  ++SL  K+E  G++ D   FN
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +IN       V  A+ +  KM   G +P   T  +L+ G+    +  +++ L+  M + 
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE- 183

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
              +P+   YN ++ + C    + +A +   ++   GI+P+ VTY  L       G    
Sbjct: 184 IGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWND 243

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A ++L +M   ++ PN  T   ++  + K G + +A      M  + + P++V ++SLI 
Sbjct: 244 AARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLIN 303

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G       D  ++   LM   G  PDVV+++T+++ +  A  +    ++F  M + G+  
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVN 363

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           +   ++ L +G+ + G+  KA+   + M  +GV P++  +  ++ G C+   +++A+ I+
Sbjct: 364 NTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIF 423

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           E M +  ++ ++ TY T++ G  +  +   A  L   +  KG++P   T   +       
Sbjct: 424 EDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTK 483

Query: 429 GLAREAK 435
           GL  E +
Sbjct: 484 GLQHEVE 490



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 179/367 (48%), Gaps = 1/367 (0%)

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +A+ +F++M  +   P+   +N L+     + K +  + L + M +   ++ +  T+NI+
Sbjct: 68  DAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKM-EVLGIRNDLYTFNIV 126

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +  +C    +  A +V+ KM+  G +PD VT  +L   + +      A  ++ +M     
Sbjct: 127 INCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           RP+      I+   CK   + DA+ F   +    + PN+V + +L+ G  +    +   +
Sbjct: 187 RPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAAR 246

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            L  M +  + P+V+T+S ++DA+   G + + +EIF++MV+  I+PDI  +S L  G  
Sbjct: 247 LLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLC 306

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
                 +A  +   M   G  P+VV + T+I+G+C A +++  M ++ KM + G+  N  
Sbjct: 307 LHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTV 366

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY TL+ G+ +     +A+E    M+  GV P   T  ++       GL  +A  + +  
Sbjct: 367 TYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDM 426

Query: 442 EEDRQSM 448
           ++    +
Sbjct: 427 QKSEMDL 433



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 178/371 (47%), Gaps = 7/371 (1%)

Query: 41  RQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS 100
           R  +    ++L  ++ K    P  + FN +++A  +    D  + + +KM+  G +    
Sbjct: 62  RDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLY 121

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
           T+N +I  +    +   +L +L  M +    +P+  T   LV  +C +N + +A ++V K
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLK-LGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           MV  G +PD V YN +  +  +      A     E+    +RPN  T   +V+G C  G 
Sbjct: 181 MVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGR 240

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE---FGVKPDVVT 277
             DA R L  M + ++ PN++ +++L+  F+    +  V +A  + EE     + PD+VT
Sbjct: 241 WNDAARLLRDMIKRKITPNVITYSALLDAFV---KNGKVLEAKEIFEEMVRMSIDPDIVT 297

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           +S++++       + +  ++FD MV  G  PD+  ++ L  G+ +A   +    +   M 
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMS 357

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
           + G+  N V + T+I G+     + +A   + +M   G++P++ TY  LL G  +     
Sbjct: 358 QRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLE 417

Query: 398 RAEELLQVMEE 408
           +A  + + M++
Sbjct: 418 KALVIFEDMQK 428



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 142/307 (46%), Gaps = 38/307 (12%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+ ++A  +   +I+    P +ITY+ L+ A  +  +      +  ++ +  +
Sbjct: 232 VNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSI 291

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + ++++IN       +DEA ++F  M   GC P   +YNTLI G+    + E+ +K
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMK 351

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + MSQ + +  N  TYN L++ +     +++A     +M + G+ PD  TYN L    
Sbjct: 352 LFRKMSQ-RGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGL 410

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G   +A  +  +MQ +++  +  T   ++ G CK G +EDA                
Sbjct: 411 CDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWG-------------- 456

Query: 241 VVFNSL-IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            +F SL +KG                      KPD+VT++T+M    + GL  + + ++ 
Sbjct: 457 -LFCSLSLKGL---------------------KPDIVTYTTMMSGLCTKGLQHEVEALYT 494

Query: 300 DMVKAGI 306
            M + G+
Sbjct: 495 KMKQEGL 501


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 196/390 (50%), Gaps = 1/390 (0%)

Query: 28  TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIF 87
           T+ T+  +V  L ++ + K     I  +E  G KP+ + +N +I+  S  GN++ A +I 
Sbjct: 248 TVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRIL 307

Query: 88  QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
             M+  G +P + TY +LI G    G+ EE+  L   M +   V PN  TYN L+  +C+
Sbjct: 308 DAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLV-PNAVTYNTLIDGYCN 366

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
           K  +E A++   +MV  GI P   TYN L  A    G    A+ M+ EM+   + P+  T
Sbjct: 367 KGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAIT 426

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
             I+++GY + GN + A      M    + P  V + SLI            D     + 
Sbjct: 427 YNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKIL 486

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
           + GV PDV+ F+ ++D   + G + +   +  +M +  + PD   F+ L +G  R G+ +
Sbjct: 487 DQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVE 546

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           +A  +L  M++ G+ P+ + + T+ISG+     ++ A  + ++M  IG NP L TY  L+
Sbjct: 547 EARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALI 606

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
               + ++   AEELL+ M  KG+ P  ST
Sbjct: 607 KCLCKNQEGDLAEELLKEMVNKGISPDDST 636



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 201/394 (51%), Gaps = 7/394 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+L  +GK  +A      +   G +P +++Y T++   + +   +    ++  +   G+
Sbjct: 256 VNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGI 315

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PDS  + ++I+   + G ++EA  +F KM + G  P   TYNTLI GY N G  E +  
Sbjct: 316 EPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFS 375

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M + K + P+  TYN+LV A   +  + EA +++ +M   GI PDA+TYN L   Y
Sbjct: 376 YRDEMVK-KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGY 434

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++ G   +A  +  EM +  + P   T   ++    +   M++A     ++ +  V P++
Sbjct: 435 SRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDV 494

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           ++FN+++ G      +  V++A  L++E     V PD VTF+T+M      G + + + +
Sbjct: 495 IMFNAMVDGHC---ANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARML 551

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            D+M + GI+PD   ++ L  GY R G+ + A  +   M   G +P ++ +  +I   C 
Sbjct: 552 LDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCK 611

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
             +   A  + ++M   GI+P+  TY +L+ G G
Sbjct: 612 NQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMG 645



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 192/378 (50%), Gaps = 7/378 (1%)

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           SI+F+ ++  C E    DEA K F  MK+ G  P   T N ++  +  + + E +  L  
Sbjct: 179 SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYA 238

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + + +     T+NI+V   C +  +++A   +  M   G +P+ V+YNT+   Y+  
Sbjct: 239 EMFRLR-ISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 297

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A ++L  M+   + P+  T G ++SG CKEG +E+A     +M E+ + PN V +
Sbjct: 298 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 357

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N+LI G+ +  D   +++A +  +E    G+ P V T++ ++ A    G MG+  ++  +
Sbjct: 358 NTLIDGYCNKGD---LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKE 414

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M K GI PD   ++IL  GY R G  +KA  +   M   G+ P  V +T++I       +
Sbjct: 415 MRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 474

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ A  ++EK+ + G++P++  +  ++ G+       RA  LL+ M+ K V P + T   
Sbjct: 475 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 534

Query: 421 VADSWRAIGLAREAKRVL 438
           +       G   EA+ +L
Sbjct: 535 LMQGRCREGKVEEARMLL 552



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/429 (24%), Positives = 195/429 (45%), Gaps = 36/429 (8%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +  EA   F  + E+G  P + T   +++   +  R +    L +++ +  +      FN
Sbjct: 194 RADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFN 253

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            M+N   + G + +A +    M+  G KP   +YNT+I GY + G  E + ++L  M + 
Sbjct: 254 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM-RV 312

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K ++P+  TY  L+   C +  +EEA  +  KMV  G+ P+AVTYNTL            
Sbjct: 313 KGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL------------ 360

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
                                  + GYC +G++E A  +   M +  + P++  +N L+ 
Sbjct: 361 -----------------------IDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVH 397

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
                      D  +  M + G+ PD +T++ +++ +S  G   K  ++ ++M+  GIEP
Sbjct: 398 ALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEP 457

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
               ++ L     R    ++A+ +   +   GV P+V+MF  ++ G C    ++RA  + 
Sbjct: 458 THVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLL 517

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           ++M    + P+  T+ TL+ G     +   A  LL  M+ +G++P   +   +   +   
Sbjct: 518 KEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRR 577

Query: 429 GLAREAKRV 437
           G  ++A RV
Sbjct: 578 GDIKDAFRV 586



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/371 (23%), Positives = 165/371 (44%), Gaps = 39/371 (10%)

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           +S+D+    +   +++LVR  C     +EA+   Y M   GI P   T N +   + +  
Sbjct: 169 LSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLN 228

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
               A  +  EM   ++     T  I+V+  CKEG ++ A  F+  M+ L   PN+V +N
Sbjct: 229 RMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYN 288

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           ++I G+    + +G  + L  M   G++PD  T+ +++      G + +   +FD MV+ 
Sbjct: 289 TIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI 348

Query: 305 GIEPDIHVFSILAKGYVRAGEPQK-----------------------------------A 329
           G+ P+   ++ L  GY   G+ ++                                   A
Sbjct: 349 GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEA 408

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           + ++  MRK G+ P+ + +  +I+G+      ++A  ++ +M   GI P   TY +L++ 
Sbjct: 409 DDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYV 468

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMP 449
                +   A++L + + ++GV P       + D   A G    A  +LK  E DR+S+P
Sbjct: 469 LSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLK--EMDRKSVP 526

Query: 450 NKKDEIAVESI 460
              DE+   ++
Sbjct: 527 --PDEVTFNTL 535



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 55/106 (51%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  EA  + + +   G +P  I+Y TL++   R+   K    +  ++   G  P  + 
Sbjct: 542 EGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLT 601

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNV 112
           +NA+I    ++   D A ++ ++M + G  P  STY +LI+G GNV
Sbjct: 602 YNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 647


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 213/415 (51%), Gaps = 4/415 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  + + +++ G +P L+TY T+V  L ++      L+L++K+E   +K + ++FN
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFN 262

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I++  +  +V+ A+ +F +M+  G +P   TYN+LI    N G+  ++ +LL  M + 
Sbjct: 263 TIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE- 321

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K + PN  T+N L+ A+  +  + EA  +  +M+   I PD +TYN L   +  +     
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A+QM   M +    PN +T   +++G+CK   +ED +     M +  +  N V + ++I+
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           GF    D D        M    V  D++T+S ++    S G +     IF  + K+ +E 
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           +I +++ + +G  +AG+  +A  +  S+    + P+VV + T+ISG C+   +Q A  ++
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLF 558

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
            KM E G  PN  TY TL+           + EL++ M   G     STI LV +
Sbjct: 559 RKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTN 613



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 200/399 (50%), Gaps = 6/399 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++E G++P   T+TTL+  L    +    ++L+ ++ + G +PD + +  ++N   + G+
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D A+ +  KM+ +  K     +NT+I         E ++ L   M + K ++PN  TYN
Sbjct: 239 IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM-ETKGIRPNVVTYN 297

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+   C+     +A  ++  M+   I P+ VT+N L  A+ + G+   AE++  EM   
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD-SDG 258
            + P+  T  ++++G+C    +++A +    M   +  PN+  +N+LI GF   K   DG
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
           V+     M + G+  + VT++TI+  +  AG     Q +F  MV   +  DI  +SIL  
Sbjct: 418 VE-LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           G    G+   A  I   ++K  +  N+ ++ T+I G C A K+  A  ++   C + I P
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF---CSLSIKP 533

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           ++ TY T++ G    +    A++L + M+E G  P   T
Sbjct: 534 DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGT 572



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 187/384 (48%), Gaps = 4/384 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G    L TY+  +    R+ +    L++++K+ K G +PD +  ++++N    S  + +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +  +M + G KP T T+ TLI G     K  E++ L+  M Q +  +P+  TY  +V 
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ-RGCQPDLVTYGTVVN 231

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C +  I+ A N++ KM A+ I+ + V +NT+  +  +Y     A  +  EM+   +RP
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  T   +++  C  G   DA R L  M E +++PN+V FN+LI  F         +K  
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M +  + PD +T++ +++ +     + + +++F  MV     P+I  ++ L  G+ + 
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
              +    +   M + G+  N V +TT+I G+  A     A  ++++M    +  ++ TY
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTY 471

Query: 384 ETLLWG---YGEAKQPWRAEELLQ 404
             LL G   YG+        + LQ
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYLQ 495



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/437 (22%), Positives = 203/437 (46%), Gaps = 36/437 (8%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  +A  +F  +++    P+++ +  L++A+ +  +F+ ++SL  +++  G+  D   ++
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
             IN       +  A+ +  KM   G +P   T ++L+ GY +  +  +++ L+  M + 
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE- 181

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
              KP+  T+  L+      N   EA  +V +MV  G QPD VTY               
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY--------------- 226

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
                               G +V+G CK G+++ A+  L +M+   +  N+V+FN++I 
Sbjct: 227 --------------------GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID 266

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
                +  +      T ME  G++P+VVT++++++   + G       +  +M++  I P
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP 326

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           ++  F+ L   + + G+  +AE +   M +  + P+ + +  +I+G+C   ++  A  ++
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           + M      PN++TY TL+ G+ + K+     EL + M ++G+     T   +   +   
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446

Query: 429 GLAREAKRVLKSAEEDR 445
           G    A+ V K    +R
Sbjct: 447 GDCDSAQMVFKQMVSNR 463



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 78/340 (22%), Positives = 159/340 (46%), Gaps = 39/340 (11%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  +A  + + ++E+   P ++T+  L+ A  ++ +      L  ++ +  +
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD+I +N +IN       +DEA ++F+ M    C P   TYNTLI G+    + E+ ++
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + MSQ                                     G+  + VTY T+ + +
Sbjct: 420 LFREMSQ------------------------------------RGLVGNTVTYTTIIQGF 443

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G+   A+ +  +M +N+V  +  T  I++ G C  G ++ A+     +++ E+  N+
Sbjct: 444 FQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNI 503

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            ++N++I+G   +  +  V +A  L     +KPDVVT++T++    S  L+ +  ++F  
Sbjct: 504 FIYNTMIEG---MCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRK 560

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           M + G  P+   ++ L +  +R  +   +  ++  MR  G
Sbjct: 561 MKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSG 600


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 217/441 (49%), Gaps = 36/441 (8%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++++G  P L TY  L+     +KR +    ++ ++   G+KP+ I +NA+I+     G+
Sbjct: 276 MVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGD 335

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +++A +I  +M   G +     +NTL+ G    GK E++L+++Q M  +K V+P+ +TY+
Sbjct: 336 IEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM-MEKGVEPDSQTYS 394

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           +L+   C   ++  A+ ++ +M    + P  +TY+ +     + G       +L EM  N
Sbjct: 395 LLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMN 454

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            ++PN      +++ + KEG +E++   L RM+E  + P++  +NSLI GF   K  +  
Sbjct: 455 GLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEA 514

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP----------- 308
              L  M E  ++P+  T+   +D +S AG M      F++M+  G+ P           
Sbjct: 515 RTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEG 574

Query: 309 ------------------------DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
                                   D+  +S+L  G  R G+  +A  I + +++ G+ PN
Sbjct: 575 HCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPN 634

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
              + ++ISG C    + +A  + E+MC  GINP++ TY  L+ G  +A +  RA+ L  
Sbjct: 635 AFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFD 694

Query: 405 VMEEKGVRPKKSTIQLVADSW 425
            +E +G+ P   T   + D +
Sbjct: 695 DIEGRGLTPNCVTYAAMVDGY 715



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 135/512 (26%), Positives = 241/512 (47%), Gaps = 45/512 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +   GK  +A  I   ++E+G  P   TY+ L+    R +       L+ +++K  +
Sbjct: 362 LNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKL 421

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + ++ +IN     GN+     I ++M  +G KP    Y TL+  +   G+ EES  
Sbjct: 422 APTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRM 481

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+ M +++ + P+   YN L+  +C    +EEA   + +M+   ++P+A TY      Y
Sbjct: 482 ILERM-REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGY 540

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM---RFLYRMKELE-- 235
           ++ GE   A++   EM +  V PN      ++ G+CKEGN+ +A    RF+   + L+  
Sbjct: 541 SKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDV 600

Query: 236 ------VH------------------------PNLVVFNSLIKGFLDIKDSDGVDKALTL 265
                 +H                        PN   +NSLI G         VDKA  L
Sbjct: 601 QTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCK---QGNVDKASQL 657

Query: 266 MEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           +EE    G+ PD+VT++ ++D    AG + + + +FDD+   G+ P+   ++ +  GY +
Sbjct: 658 LEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCK 717

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           +  P  A  +L  M   GV P+  ++  +++  C   K ++A+ ++++M E G    + +
Sbjct: 718 SKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-S 776

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           + TL+ GY ++ +   A  LL+ M EK   P   T   + D     G+  EAKR+    +
Sbjct: 777 FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQ 836

Query: 443 EDRQSMPNKKDEIA-VESIHRKQNLSASNSTF 473
           E R  MP  K   + +   H   N+S  ++ F
Sbjct: 837 E-RNVMPTAKTYTSLLHGYHNIGNMSEVSALF 867



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 198/388 (51%), Gaps = 1/388 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           RP+L++  +L+  L +  + +    +   +    + PD   +  MI+A  + GNV +A +
Sbjct: 177 RPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKR 236

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +  +M + GC P   TYN +I G       +E+++L + M  DK + P+  TY+IL+  +
Sbjct: 237 VLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMV-DKGLVPDLYTYDILINGF 295

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C +    EA  ++ +M+  G++P+ +TYN L   + + G+  +A ++  EM    +  N 
Sbjct: 296 CMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANL 355

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
                +++G CK G ME A+  +  M E  V P+   ++ LI+G    ++     + L  
Sbjct: 356 IIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDE 415

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M++  + P V+T+S I++     G +     I  +MV  G++P+  V++ L   + + G 
Sbjct: 416 MKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGR 475

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            +++  IL  MR+ G+ P+V  + ++I G+C A +M+ A +   +M E  + PN  TY  
Sbjct: 476 VEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGA 535

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            + GY +A +   A+     M   GV P
Sbjct: 536 FIDGYSKAGEMEIADRYFNEMLSCGVLP 563



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 214/435 (49%), Gaps = 2/435 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F+ +      P + TYT +++A  +    K    ++ ++ + G  P+ + +N +I    
Sbjct: 202 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLC 261

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
            +  +DEA+++ + M D G  P   TY+ LI G+    +  E+ KL+ L   D  +KP  
Sbjct: 262 RARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREA-KLMLLEMIDVGLKPEP 320

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TYN L+  +  +  IE+A+ +  +MVA GI+ + + +NTL     + G+  +A +++ E
Sbjct: 321 ITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQE 380

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M    V P+ +T  +++ G+C+  NM  A   L  MK+ ++ P ++ ++ +I G     +
Sbjct: 381 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGN 440

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
             G +  L  M   G+KP+ V ++T+M A +  G + + + I + M + GI PD+  ++ 
Sbjct: 441 LQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNS 500

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  G+ +A   ++A + L  M +  + PN   +   I G+  A +M+ A   + +M   G
Sbjct: 501 LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCG 560

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           + PN+  Y  L+ G+ +      A  + + +  + V     T  ++       G   EA 
Sbjct: 561 VLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAF 620

Query: 436 RVLKSAEEDRQSMPN 450
            +    +E +  +PN
Sbjct: 621 GIFSELQE-KGLLPN 634



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 187/379 (49%), Gaps = 7/379 (1%)

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P  +  N+++    +   V+   K+F  M      P   TY  +I  +  VG  +++ +
Sbjct: 177 RPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKR 236

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M + K   PN  TYN+++   C    ++EA  +   MV  G+ PD  TY+ L   +
Sbjct: 237 VLLEMGE-KGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGF 295

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                +  A+ ML EM +  ++P   T   ++ G+ ++G++E A R    M    +  NL
Sbjct: 296 CMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANL 355

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           +++N+L+ G   +  +  ++KAL +M+E    GV+PD  T+S +++       M +  E+
Sbjct: 356 IIWNTLLNG---VCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFEL 412

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            D+M K  + P +  +S++  G  R G  Q   +IL  M   G+ PN V++TT+++    
Sbjct: 413 LDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAK 472

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             +++ +  I E+M E GI P++  Y +L+ G+ +AK+   A   L  M E+ +RP   T
Sbjct: 473 EGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHT 532

Query: 418 IQLVADSWRAIGLAREAKR 436
                D +   G    A R
Sbjct: 533 YGAFIDGYSKAGEMEIADR 551



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/436 (25%), Positives = 206/436 (47%), Gaps = 8/436 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+   A   FN ++  G  P +  YT L+    ++       S+   +    +  D   +
Sbjct: 544 GEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTY 603

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +I+  S +G + EA  IF ++++ G  P   TYN+LI G    G  +++ +LL+ M  
Sbjct: 604 SVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCI 663

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K + P+  TYNIL+   C    IE A N+   +   G+ P+ VTY  +   Y +     
Sbjct: 664 -KGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPT 722

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A Q+L EM    V P+     +I++  CKE   E A+     M E +   + V FN+LI
Sbjct: 723 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE-KGFASTVSFNTLI 781

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +G+     S  + +A  L+EE   K   P+ VT+++++D    AG+MG+ + ++ +M + 
Sbjct: 782 EGYC---KSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQER 838

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
            + P    ++ L  GY   G   +  ++   M   G+ P+ + +  +I  +C    +  A
Sbjct: 839 NVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEA 898

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             + +++   G+  ++  Y+ L+    + ++ +   +LL  + E G R    T  ++A  
Sbjct: 899 CKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARG 958

Query: 425 WRAIGLAREAKRVLKS 440
           ++  G   EA  VL+S
Sbjct: 959 FQIAGNMDEAAEVLRS 974



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/404 (24%), Positives = 186/404 (46%), Gaps = 2/404 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   EA  +F  ++       + TY+ L+  L+R  +      + S++++ G+ P++  
Sbjct: 578 EGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFT 637

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N++I+   + GNVD+A ++ ++M   G  P   TYN LI G    G+ E +  L   + 
Sbjct: 638 YNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI- 696

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + + + PN  TY  +V  +C   +   A+ ++ +M+  G+ PDA  YN +   +    E 
Sbjct: 697 EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILN-FCCKEEK 755

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
           +     LF+    +   +  +   ++ GYCK G +++A   L  M E +  PN V + SL
Sbjct: 756 FEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSL 815

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I             +    M+E  V P   T+++++  + + G M +   +F++MV  GI
Sbjct: 816 IDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGI 875

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           EPD   + ++   Y R G   +A  +   +   G+  +V  +  +I   C   +    + 
Sbjct: 876 EPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLK 935

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +  ++ E G    L T   +  G+  A     A E+L+ M + G
Sbjct: 936 LLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFG 979



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/399 (24%), Positives = 183/399 (45%), Gaps = 2/399 (0%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            GK HEA  IF+ L E+G  P   TY +L++   +Q        L+ ++   G+ PD + +
Sbjct: 614  GKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTY 673

Query: 68   NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            N +I+   ++G ++ A  +F  ++  G  P   TY  ++ GY     P  + +LL+ M  
Sbjct: 674  NILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLL 733

Query: 128  DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
             + V P+   YN+++   C +   E+A ++  +M+  G     V++NTL   Y + G+  
Sbjct: 734  -RGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQ 791

Query: 188  RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
             A  +L EM   Q  PN  T   ++   CK G M +A R    M+E  V P    + SL+
Sbjct: 792  EANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLL 851

Query: 248  KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             G+ +I +   V      M   G++PD +T+  ++DA+   G + +  ++ D+++  G+ 
Sbjct: 852  HGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMP 911

Query: 308  PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
              +  +  L +   +  E  +   +L  + + G    +   + +  G+  A  M  A  +
Sbjct: 912  MSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEV 971

Query: 368  YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
               M + G   N  +   L+ G         ++ LL+ M
Sbjct: 972  LRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 164/347 (47%), Gaps = 1/347 (0%)

Query: 97  PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWN 156
           P +  ++ L+  Y  +G   E++ +  L  ++   +P+  + N L+      N +E  W 
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVF-LGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 201

Query: 157 VVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
           V   M A  + PD  TY  +  A+ + G    A+++L EM      PN  T  +I+ G C
Sbjct: 202 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLC 261

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           +   +++A+     M +  + P+L  ++ LI GF   K S      L  M + G+KP+ +
Sbjct: 262 RARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPI 321

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T++ ++D +   G + +   I D+MV  GIE ++ +++ L  G  +AG+ +KA  I+  M
Sbjct: 322 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 381

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
            + GV P+   ++ +I G C    M RA  + ++M +  + P + TY  ++ G       
Sbjct: 382 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNL 441

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
                +L+ M   G++P       +  +    G   E++ +L+   E
Sbjct: 442 QGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMRE 488



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 60/120 (50%)

Query: 7    KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
            +G   EA  + + ++ +G   ++  Y  L+ AL +++ F  +L L++++ + G +     
Sbjct: 892  EGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPT 951

Query: 67   FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
             + +      +GN+DEA ++ + M   G    T++   L+ G  N    E+S  LL+ M+
Sbjct: 952  CSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQMA 1011


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 212/438 (48%), Gaps = 1/438 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G PH A   +  +          T   +V    +   F  + ++IS++EK  + PD +  
Sbjct: 74  GWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTH 133

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N M++A   +G+ + AM +   M   G KP   TYN+++KG    G  +++ ++ + M  
Sbjct: 134 NVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMD- 192

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D  V P+ R++ IL+  +C    IEEA  +  +M   GI+PD V+++ L   +A+ G+  
Sbjct: 193 DFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMD 252

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A   L EM+   + P+     +++ G+C+ G M DA+R    M      P++V +N+L+
Sbjct: 253 HAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLL 312

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G    +     +  L  M E GV PD+ TF+T++  +   G + K  ++FD M+   + 
Sbjct: 313 NGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR 372

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PDI  ++ L  G  R G+  KA  +   M    + PN V ++ +I   C   +++ A   
Sbjct: 373 PDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGF 432

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
            ++M   GI PN+ TY +++ GY  +    + ++ LQ M    V P   T   +   +  
Sbjct: 433 LDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIK 492

Query: 428 IGLAREAKRVLKSAEEDR 445
                +A ++L   E+++
Sbjct: 493 EDKMHDAFKLLNMMEKEK 510



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 214/444 (48%), Gaps = 5/444 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A  + + ++ +G +P ++TY +++  L R   +     +  +++  G+ PD   F
Sbjct: 144 GDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSF 203

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I      G ++EA+KI+++M+  G KP   +++ LI  +   GK + ++  L+ M +
Sbjct: 204 TILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM-R 262

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              + P+   Y +++  +C    + +A  V  +MV  G  PD VTYNTL     +     
Sbjct: 263 CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 322

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            AE +L EM+   V P+  T   ++ GYC EG ++ A++    M    + P++V +N+LI
Sbjct: 323 DAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLI 382

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G     D D  +     M    + P+ VT+S ++D+    G +       D+M+  GI 
Sbjct: 383 DGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGIL 442

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P+I  ++ + KGY R+G   K +  L  M    V P+++ + T+I G+    KM  A  +
Sbjct: 443 PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKL 502

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
              M +  + P++ TY  L+ G+        A  + + M  KG+ P + T   + +    
Sbjct: 503 LNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVT 562

Query: 428 IGLAREA----KRVLKSAEEDRQS 447
            G ++EA      +L+  +E R++
Sbjct: 563 AGNSKEAFQLHDEMLQRGKEKRRA 586



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 207/413 (50%), Gaps = 13/413 (3%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  + + G  P + ++T L+    R    +  L +  ++   G+KPD + F+ +I   +
Sbjct: 187 VFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFA 246

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
             G +D AM   ++M+  G  P    Y  +I G+   G   ++L++   M       P+ 
Sbjct: 247 RRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMV-GCGCLPDV 305

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TYN L+   C +  + +A  ++ +M   G+ PD  T+ TL   Y   G+  +A Q+   
Sbjct: 306 VTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDT 365

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M N ++RP+  T   ++ G C++G+++ A      M   E+ PN V ++ LI       +
Sbjct: 366 MLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC---E 422

Query: 256 SDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
              V+ A   ++E    G+ P+++T+++I+  +  +G + K Q+    M+   + PD+  
Sbjct: 423 KGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLIT 482

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++ L  GY++  +   A  +L  M K  V P+VV +  +I+G+     +Q A  I+EKMC
Sbjct: 483 YNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMC 542

Query: 373 EIGINPNLKTYETLLWGY---GEAKQPWRA-EELLQVMEEKGVRPKKSTIQLV 421
             GI P+  TY +++ G+   G +K+ ++  +E+LQ  +EK  R    T+Q V
Sbjct: 543 AKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKEK--RRAAGTVQFV 593



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 113/221 (51%), Gaps = 1/221 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  +A  +F+ ++ +  RP ++TY TL+  + RQ        L   +    + P+ + 
Sbjct: 353 EGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVT 412

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +I++  E G V++A     +M + G  P   TYN++IKGY   G   +  K LQ M 
Sbjct: 413 YSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM 472

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +K V P+  TYN L+  +  ++ + +A+ ++  M    +QPD VTYN L   ++ +G  
Sbjct: 473 VNK-VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNV 531

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
             A  +  +M    + P+  T   +++G+   GN ++A + 
Sbjct: 532 QEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQL 572



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 49/193 (25%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P LITY TL+    ++ +      L++ +EK+ ++PD + +N +IN  S  GNV EA  I
Sbjct: 478 PDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWI 537

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK-------------- 132
           F+KM   G +P   TY ++I G+   G  +E+ +L   M Q    K              
Sbjct: 538 FEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKEKRRAAGTVQFVNIQN 597

Query: 133 --------PND-----------RTYNILVRA----------------WCSKNSIEEAWNV 157
                   P D           +T    +R                 +    S+E+ W +
Sbjct: 598 SAESLKQMPMDLKVTCSIYFFAKTQEFAIRGCAFVFGALEKSSTPLNFQGTRSLEDHWKI 657

Query: 158 VYKMVASGIQPDA 170
           +  ++ S + PDA
Sbjct: 658 LVGLLGSLVHPDA 670


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 201/411 (48%), Gaps = 2/411 (0%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
           I +G  P  +TY T V  L +       L ++  + ++G  PD   +N +IN  S++G +
Sbjct: 292 IADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGEL 351

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           DEA  I  +M D GC P T+T+NTLI    +  + EE+L L + ++  K + P+  T+NI
Sbjct: 352 DEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTV-KGLSPDVYTFNI 410

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+ A C          +  +M +SG  PD VTYN L       G+   A  +L EM++N 
Sbjct: 411 LINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNG 470

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
              +  T   I+   CK+  +E+A     +M    +  + V FN+LI G    K  D   
Sbjct: 471 CPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDAT 530

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           + +  M + G++P  +T+++I+  +   G + K  +I + M   G E D+  +  L  G 
Sbjct: 531 ELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGL 590

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            +AG  Q A  +L  MR  G+ P    +  VI        ++ A+S++ +M E+G  P+ 
Sbjct: 591 CKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDA 650

Query: 381 KTYETLLWGYGEAKQPWR-AEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
            TY+ +  G      P + A + L  M  KG  P+ S+ +++A+    +G+
Sbjct: 651 LTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGM 701



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 200/421 (47%), Gaps = 1/421 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M   + +G    A  +   ++E G  PT +T   L+    +  R +  L  I K   DG 
Sbjct: 237 MQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGF 296

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD + +N  ++   ++G+V  A+K+   M   G  P   TYNT+I      G+ +E+  
Sbjct: 297 EPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKG 356

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           ++  M  D+   P+  T+N L+ A CS+N +EEA ++  ++   G+ PD  T+N L  A 
Sbjct: 357 IVNQMV-DRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINAL 415

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+ +   ++  EM+++   P+E T  I++   C  G + +A+  L  M+      + 
Sbjct: 416 CKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRST 475

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N++I         +  ++    M+  G+    VTF+T++D    A  +    E+ + 
Sbjct: 476 VTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQ 535

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MVK G++P    ++ +   Y + G+ +KA  IL +M   G   +VV + T+I+G C A +
Sbjct: 536 MVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGR 595

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
            Q A+ +   M   GI P  K Y  ++           A  L + M E G  P   T ++
Sbjct: 596 TQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKI 655

Query: 421 V 421
           V
Sbjct: 656 V 656



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/479 (23%), Positives = 220/479 (45%), Gaps = 1/479 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+L    +      ++N + + G +P ++T  TL+ AL R  + ++ + ++ ++    +
Sbjct: 167 LNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAV 226

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   F  ++    E G+++ A+++  KM ++GC PT  T N LI GY  +G+ E++L 
Sbjct: 227 APDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALG 286

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            +Q    D   +P+  TYN  V   C    +  A  V+  M+  G  PD  TYNT+    
Sbjct: 287 YIQKEIAD-GFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCL 345

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++ GE   A+ ++ +M +    P+  T   ++   C +  +E+A+     +    + P++
Sbjct: 346 SKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDV 405

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FN LI     + D     +    M+  G  PD VT++ ++D   S G +    ++  +
Sbjct: 406 YTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKE 465

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G       ++ +     +    ++AE +   M  +G+  + V F T+I G C A +
Sbjct: 466 MESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKR 525

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  + E+M + G+ P+  TY ++L  Y +     +A ++L+ M   G      T   
Sbjct: 526 IDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGT 585

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGV 479
           + +     G  + A ++L+           K     ++S+ R+ NL  + S F ++  V
Sbjct: 586 LINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEV 644



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/457 (22%), Positives = 206/457 (45%), Gaps = 43/457 (9%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLI-SKVEKDGMKPDSILFNAMINACSESGNVD 81
           EGH        + V +  R +RF   + L+ +++   G++ D+ ++N ++N  +E   + 
Sbjct: 118 EGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMK 177

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
               ++ +M D G +P   T NTLIK      +   ++ +L+ MS    V P++ T+  L
Sbjct: 178 LLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHA-VAPDETTFTTL 236

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN--- 198
           ++ +  + SIE A  V  KM+ +G  P  VT N L   Y + G   R E  L  +Q    
Sbjct: 237 MQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMG---RVEDALGYIQKEIA 293

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
           +   P++ T    V   C+ G++  A++ +  M +    P++  +N++I       + D 
Sbjct: 294 DGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDE 353

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
               +  M + G  PD  TF+T++ A  S   + +  ++  ++   G+ PD++ F+IL  
Sbjct: 354 AKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILIN 413

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPN---------------------------------- 344
              + G+P     +   M+  G  P+                                  
Sbjct: 414 ALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPR 473

Query: 345 -VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
             V + T+I   C  ++++ A  ++++M   GI+ +  T+ TL+ G  +AK+   A EL+
Sbjct: 474 STVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELI 533

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
           + M ++G++P   T   +   +   G  ++A  +L++
Sbjct: 534 EQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILET 570



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/414 (23%), Positives = 197/414 (47%), Gaps = 7/414 (1%)

Query: 35  LVAALTRQKRFKSILSLI-SKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS 93
           L+ AL  Q   ++ L ++ S + ++   P   ++  +I     +G  D    + ++M+  
Sbjct: 59  LLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRRE 118

Query: 94  GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
           G +       + ++ Y  + + ++++ L++       V+ +   YN L+      + ++ 
Sbjct: 119 GHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKL 178

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
             +V  +M   GIQPD VT NTL +A  +  +   A  ML EM ++ V P+E T   ++ 
Sbjct: 179 LESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQ 238

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE---FG 270
           G+ +EG++E A+R   +M E    P  V  N LI G+  +     V+ AL  +++    G
Sbjct: 239 GFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGR---VEDALGYIQKEIADG 295

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
            +PD VT++T +      G +    ++ D M++ G +PD+  ++ +     + GE  +A+
Sbjct: 296 FEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAK 355

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            I+  M   G  P+   F T+I   C+  +++ A+ +  ++   G++P++ T+  L+   
Sbjct: 356 GIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINAL 415

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
            +   P     L + M+  G  P + T  ++ D   ++G    A  +LK  E +
Sbjct: 416 CKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESN 469



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/229 (20%), Positives = 90/229 (39%), Gaps = 39/229 (17%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   +A  I   +   G    ++TY TL+  L +  R +  L L+  +   G++P    
Sbjct: 558 QGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKA 617

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I +     N+ +A+ +F++M + G  P   TY  + +G    G P           
Sbjct: 618 YNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGP----------- 666

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG-E 185
                                   I+EA++ + +MV  G  P+  ++  LA      G +
Sbjct: 667 ------------------------IKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMD 702

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
            Y    +   ++  + R ++ +    + GY K     DA+    R+ E+
Sbjct: 703 DYLISAIELIIEKAKFRESDVSA---IRGYLKIRKYYDALATFGRLLEI 748



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 63/136 (46%), Gaps = 1/136 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+   A  +   +  +G RPT   Y  ++ +L R+   +  LSL  ++ + G 
Sbjct: 587 INGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGE 646

Query: 61  KPDSILFNAMINA-CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
            PD++ +  +    C   G + EA     +M + G  P  S++  L +G  N+G  +  +
Sbjct: 647 PPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLI 706

Query: 120 KLLQLMSQDKNVKPND 135
             ++L+ +    + +D
Sbjct: 707 SAIELIIEKAKFRESD 722


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 218/438 (49%), Gaps = 8/438 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  +A ++F+ +I EG +P ++TY TL+  L +     + + L+  +E+   +PD
Sbjct: 149 LCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPD 208

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++ ++I++  +   V EA  +F KM   G  P   TY +LI    N+ + +    LL 
Sbjct: 209 VVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLN 268

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K + P+   ++ +V A C +  I EA +VV  M+  G++P+ VTYN L   +   
Sbjct: 269 QMINSK-IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQ 327

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E   A ++   M +N   PN  +   +++GYCK   M+ A      M + E+ PN V +
Sbjct: 328 SEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTY 387

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N+L+      +  D    A+ L  E    G  PD+ T+  ++D       + +   +   
Sbjct: 388 NTLMHXCHVGRLQD----AIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKT 443

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +  + ++PDI +++I+  G  RAGE + A  I +++   G+ PNV  +T +I+G C    
Sbjct: 444 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGL 503

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ +M   G +P+  TY T+  G  + K+  RA +LLQ M  +G     ST  L
Sbjct: 504 LDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTL 563

Query: 421 VADSWRAIGLAREAKRVL 438
           + +      L +  K++L
Sbjct: 564 LVEMLCDDKLDQSVKQIL 581



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 200/451 (44%), Gaps = 42/451 (9%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P + T   L+ +     R     S+++K+ K G +PD+  F  +I      G + +A
Sbjct: 99  GIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDA 158

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +F KM   G +P   TY TLI G   VG    +++LL+ M Q  N +P+   Y  ++ 
Sbjct: 159 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQ-GNCQPDVVVYTSIID 217

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C    + EA+N+  KMV  GI PD  TY +L  +     E      +L +M N+++ P
Sbjct: 218 SLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMP 277

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +      +V   CKEG + +A   +  M    V PN+V +N+L+ G     + D   K  
Sbjct: 278 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVF 337

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGK--------CQE------------------- 296
             M   G  P+V++++T+++ +     M K        CQ+                   
Sbjct: 338 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVG 397

Query: 297 -------IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
                  +F +MV  G  PD+  + IL     +     +A ++L ++    + P++ ++T
Sbjct: 398 RLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYT 457

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
            VI G C A +++ A  I+  +   G+ PN++TY  ++ G         A +L   M+  
Sbjct: 458 IVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGN 517

Query: 410 GVRPKKSTIQLVA-------DSWRAIGLARE 433
           G  P   T   +        ++ RAI L +E
Sbjct: 518 GCSPDGCTYNTITQGLLQNKEALRAIQLLQE 548



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 202/457 (44%), Gaps = 37/457 (8%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           FN ++     P+ + +  L+ ++ + K++ ++ SL ++++  G+ PD    N +IN+   
Sbjct: 57  FNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCH 116

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
              +  A  +  K+   G +P T+T+ T                                
Sbjct: 117 LNRLGFAFSVLAKILKLGHQPDTATFTT-------------------------------- 144

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
               L+R  C +  I +A ++  KM+  G QP+ VTY TL     + G T  A ++L  M
Sbjct: 145 ----LIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSM 200

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
           +    +P+      I+   CK+  + +A     +M    + P++  + SLI    ++ + 
Sbjct: 201 EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEW 260

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
             V   L  M    + PDVV FST++DA    G + +  ++ D M+  G+EP++  ++ L
Sbjct: 261 KHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNAL 320

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G+    E  +A  +  +M   G  PNV+ + T+I+G+C   +M +A  ++E+MC+  +
Sbjct: 321 MDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKEL 380

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            PN  TY TL+       +   A  L   M   G  P  +T +++ D         EA  
Sbjct: 381 IPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMA 439

Query: 437 VLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF 473
           +LK+ E        +   I ++ + R   L A+   F
Sbjct: 440 LLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIF 476



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 146/303 (48%), Gaps = 8/303 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EAH + + +I  G  P ++TY  L+     Q      + +   +  +G  P+
Sbjct: 289 LCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPN 348

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I +N +IN   +   +D+A  +F++M      P T TYNTL+    +VG+ ++++ L  
Sbjct: 349 VISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFH 407

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M     + P+  TY IL+   C K+ ++EA  ++  +  S + PD   Y  +     + 
Sbjct: 408 EMVAHGQI-PDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRA 466

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           GE   A  +   + +  +RPN RT  I+++G C+ G +++A +    M      P+   +
Sbjct: 467 GELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTY 526

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N++ +G L  K++    +A+ L++E    G   DV T + +++      L    ++I  +
Sbjct: 527 NTITQGLLQNKEA---LRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSE 583

Query: 301 MVK 303
            V+
Sbjct: 584 FVQ 586



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 67/300 (22%), Positives = 127/300 (42%), Gaps = 35/300 (11%)

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
           N++++A +   +M+     P  V +N L  + A+  +      +  +M +  + P+  T 
Sbjct: 48  NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL 107

Query: 209 GIIVS-----------------------------------GYCKEGNMEDAMRFLYRMKE 233
            I+++                                   G C EG + DA+    +M  
Sbjct: 108 NILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIG 167

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
               PN+V + +LI G   + +++   + L  ME+   +PDVV +++I+D+      + +
Sbjct: 168 EGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTE 227

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
              +F  MV  GI PDI  ++ L        E +   ++L  M    + P+VV+F+TV+ 
Sbjct: 228 AFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVD 287

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             C   K+  A  + + M   G+ PN+ TY  L+ G+    +   A ++   M   G  P
Sbjct: 288 ALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAP 347


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 213/422 (50%), Gaps = 7/422 (1%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK---PDSILFNAMINACSESG 78
           E G  P  ++Y+ L+     + R +  L L+  +  D  +   P+ + +  +I+   ++ 
Sbjct: 162 ELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQ 221

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
             D A  +FQ+M D+G KP   TYN LI GY ++GK +E +++L+ MS  + +KP+  TY
Sbjct: 222 LFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSA-RGLKPDCYTY 280

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
             L+   C+   + E  + +  MV +G+ PD   +N    AYA+ G   +A  +  +M+ 
Sbjct: 281 GSLLNYLCA---LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQ 337

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
           + + PN    G ++   CK G ++DA     +M    V PN+VVFNSL+ G   +   + 
Sbjct: 338 HGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWER 397

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
            ++ +  M + G+ P+ V F+T++    + G + + + + D M   G+ PD   ++ L  
Sbjct: 398 AEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLIS 457

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           GY  AG   +AE +   M   G+ P  V + T++ G+C+A ++  A  ++ +M   G+ P
Sbjct: 458 GYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTP 517

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            + TY T+L G  + K+   A+EL   M   G +    T  ++ +         EA ++ 
Sbjct: 518 GVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMF 577

Query: 439 KS 440
           +S
Sbjct: 578 QS 579



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 194/400 (48%), Gaps = 12/400 (3%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +P   TY +L+  L       S L L+ +   +G+ PD  +FN   +A ++ G +D+A
Sbjct: 272 GLKPDCYTYGSLLNYLCALSEMHSFLDLMVE---NGLSPDHHIFNIFFSAYAKCGMIDKA 328

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES-LKLLQLMSQDKNVKPNDRTYNILV 142
           M IF KM+  G  P    Y  LI     +G+ +++ +K  Q++++   V PN   +N LV
Sbjct: 329 MDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINE--GVTPNIVVFNSLV 386

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
              C+ +  E A  +VY+M+  GI P+AV +NTL       G      +++  M++  VR
Sbjct: 387 YGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVR 446

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+  +   ++SGYC  G  ++A +    M  + + P  V +N+L+ G+     +  +D A
Sbjct: 447 PDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCS---ASRIDDA 503

Query: 263 LTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
             L  E    GV P VVT++TI+          + +E++ +M+ +G + DI+ ++I+  G
Sbjct: 504 YCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNG 563

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             ++    +A  +  S+   G+  N++ FT +I       + + AM ++  +   G+ PN
Sbjct: 564 LCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPN 623

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           + TY  +     E       + L   ME+ G  P    + 
Sbjct: 624 VVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLN 663



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/453 (21%), Positives = 205/453 (45%), Gaps = 9/453 (1%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F  +I+ G +P   TY  L+       ++K ++ ++ K+   G+KPD   + +++N
Sbjct: 226 AEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLN 285

Query: 73  -ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
             C+ S    E       M ++G  P    +N     Y   G  ++++ +   M Q   +
Sbjct: 286 YLCALS----EMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQ-HGL 340

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PN   Y  L+ A C    +++A     +M+  G+ P+ V +N+L        +  RAE+
Sbjct: 341 SPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEE 400

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +++EM +  + PN      ++   C  G + +  R +  M+ + V P+   +  LI G+ 
Sbjct: 401 LVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYC 460

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
               +D  +K    M   G+ P  VT++T++  + SA  +     +F +M++ G+ P + 
Sbjct: 461 LAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVV 520

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++ +  G  +     +A+ +  +M   G   ++  +  +++G C +  +  A  +++ +
Sbjct: 521 TYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSL 580

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
           C  G+  N+ T+  ++    +  +   A +L   +   G+ P   T +LVA++    G  
Sbjct: 581 CSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSL 640

Query: 432 REAKRVLKSAEEDRQSMPNKK--DEIAVESIHR 462
            E   +  SA E   + PN +  + +    +HR
Sbjct: 641 EEFDSLF-SAMEKNGTAPNSQMLNALVRRLLHR 672



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 95/410 (23%), Positives = 183/410 (44%), Gaps = 1/410 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           E H   + ++E G  P    +    +A  +       + + +K+ + G+ P+ + + A+I
Sbjct: 292 EMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALI 351

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +A  + G VD+A   F +M + G  P    +N+L+ G   V K E + +L+  M  D+ +
Sbjct: 352 DALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEM-LDQGI 410

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PN   +N L+   C+   + E   ++  M   G++PDA +Y  L   Y   G T  AE+
Sbjct: 411 CPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEK 470

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +   M +  + P E T   ++ GYC    ++DA      M    V P +V +N+++ G  
Sbjct: 471 VFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLF 530

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
             K      +    M   G K D+ T++ I++    +  + +  ++F  +   G++ +I 
Sbjct: 531 QTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNII 590

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            F+I+    ++ G  + A  +  ++   G+ PNVV +  V         ++   S++  M
Sbjct: 591 TFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAM 650

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            + G  PN +    L+          RA   L  ++E+    + ST  L+
Sbjct: 651 EKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLL 700



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/370 (23%), Positives = 171/370 (46%), Gaps = 1/370 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  +A   FN +I EG  P ++ + +LV  L    +++    L+ ++   G+
Sbjct: 351 IDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGI 410

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+++ FN +I      G V E  ++   M+  G +P   +Y  LI GY   G+ +E+ K
Sbjct: 411 CPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEK 470

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M     + P + TYN L+  +CS + I++A+ +  +M+  G+ P  VTYNT+    
Sbjct: 471 VFDGMVS-IGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGL 529

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q      A+++   M N+  + +  T  II++G CK   +++A +    +    +  N+
Sbjct: 530 FQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNI 589

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + F  +I   L     +        +   G+ P+VVT+  + +     G + +   +F  
Sbjct: 590 ITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSA 649

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M K G  P+  + + L +  +  G+  +A + L+ + +          + +IS + +   
Sbjct: 650 MEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIFTSDEY 709

Query: 361 MQRAMSIYEK 370
              A S+ EK
Sbjct: 710 QHHAKSLPEK 719


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 212/438 (48%), Gaps = 1/438 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G PH A   +  +          T   +V    +   F  + ++IS++EK  + PD +  
Sbjct: 135 GWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTH 194

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N M++A   +G+ + AM +   M   G KP   TYN+++KG    G  +++ ++ + M  
Sbjct: 195 NVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMD- 253

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D  V P+ R++ IL+  +C    IEEA  +  +M   GI+PD V+++ L   +A+ G+  
Sbjct: 254 DFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMD 313

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A   L EM+   + P+     +++ G+C+ G M DA+R    M      P++V +N+L+
Sbjct: 314 HAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLL 373

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G    +     +  L  M E GV PD+ TF+T++  +   G + K  ++FD M+   + 
Sbjct: 374 NGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR 433

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PDI  ++ L  G  R G+  KA  +   M    + PN V ++ +I   C   +++ A   
Sbjct: 434 PDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGF 493

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
            ++M   GI PN+ TY +++ GY  +    + ++ LQ M    V P   T   +   +  
Sbjct: 494 LDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIK 553

Query: 428 IGLAREAKRVLKSAEEDR 445
                +A ++L   E+++
Sbjct: 554 EDKMHDAFKLLNMMEKEK 571



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 206/427 (48%), Gaps = 1/427 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A  + + ++ +G +P ++TY +++  L R   +     +  +++  G+ PD   F
Sbjct: 205 GDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSF 264

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I      G ++EA+KI+++M+  G KP   +++ LI  +   GK + ++  L+ M +
Sbjct: 265 TILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM-R 323

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              + P+   Y +++  +C    + +A  V  +MV  G  PD VTYNTL     +     
Sbjct: 324 CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 383

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            AE +L EM+   V P+  T   ++ GYC EG ++ A++    M    + P++V +N+LI
Sbjct: 384 DAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLI 443

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G     D D  +     M    + P+ VT+S ++D+    G +       D+M+  GI 
Sbjct: 444 DGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGIL 503

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P+I  ++ + KGY R+G   K +  L  M    V P+++ + T+I G+    KM  A  +
Sbjct: 504 PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKL 563

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
              M +  + P++ TY  L+ G+        A  + + M  KG+ P + T   + +    
Sbjct: 564 LNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVT 623

Query: 428 IGLAREA 434
            G ++EA
Sbjct: 624 AGNSKEA 630



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 198/383 (51%), Gaps = 5/383 (1%)

Query: 3   ILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           IL+G     G+  EA  I+  +   G +P L++++ L+    R+ +    ++ + ++   
Sbjct: 266 ILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCF 325

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+ PD +++  +I     +G + +A+++  +M   GC P   TYNTL+ G     +  ++
Sbjct: 326 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 385

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
             LL  M +++ V P+  T+  L+  +C +  +++A  +   M+   ++PD VTYNTL  
Sbjct: 386 EGLLNEM-RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLID 444

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
              + G+  +A  +  +M + ++ PN  T  I++  +C++G +EDA  FL  M    + P
Sbjct: 445 GMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILP 504

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           N++ +NS+IKG+    +     K L  M    V PD++T++T++  +     M    ++ 
Sbjct: 505 NIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL 564

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           + M K  ++PD+  +++L  G+   G  Q+A  I   M   G+ P+   + ++I+G   A
Sbjct: 565 NMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTA 624

Query: 359 VKMQRAMSIYEKMCEIGINPNLK 381
              + A  ++++M + G  P+ K
Sbjct: 625 GNSKEAFQLHDEMLQRGFAPDDK 647


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 214/427 (50%), Gaps = 6/427 (1%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  +A  +F  +++    P++I ++ L++A+ +  +F  ++SL  +++  GM  +   ++
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +IN       +  A+ +  KM   G +P   T ++L+ GY +  +  E++ L+  M   
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV- 179

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
              +PN  T+N L+      N   EA  ++ +MVA G QPD VTY  +     + G+T  
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  +L +M+  ++ P       I+ G CK  +M+DA+     M+   + PN+V ++SLI 
Sbjct: 240 AFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
              +        + L+ M E  + PDV TFS ++DA+   G + + ++++D+MVK  I+P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
            I  +S L  G+       +A+ +   M      P+VV ++T+I G+C A ++   M ++
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELF 419

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            +M + G+  N  TY TL+ G  +A     A+E+ + M   GV P   T   + D     
Sbjct: 420 REMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD----- 474

Query: 429 GLAREAK 435
           GL +  K
Sbjct: 475 GLCKNGK 481



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 219/463 (47%), Gaps = 23/463 (4%)

Query: 8   GKPHEAHYIFNCLI--------------------EEGHRPTLITYTTLVAALTRQKRFKS 47
           G PH  HY ++ LI                    + G+ P ++T ++L+      KR   
Sbjct: 111 GMPHN-HYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 169

Query: 48  ILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIK 107
            ++L+ ++   G +P+++ FN +I+         EA+ +  +M   GC+P   TY  ++ 
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVN 229

Query: 108 GYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ 167
           G    G  + +  LL  M Q K ++P    Y  ++   C    +++A N+  +M   GI+
Sbjct: 230 GLCKRGDTDLAFILLNKMEQGK-LEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIR 288

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
           P+ VTY++L      YG    A ++L +M   ++ P+  T   ++  + KEG + +A + 
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
              M +  + P++V ++SLI GF      D   +    M      PDVV++ST++  +  
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCK 408

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
           A  + +  E+F +M + G+  +   ++ L +G  +AG+   A+ I   M   GV PN++ 
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           + T++ G C   K+++AM ++E +    + P + TY  ++ G  +A +     +L   + 
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            KGV+P       +   +   G   EA  + K  +ED  ++PN
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED-GTLPN 570



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 216/415 (52%), Gaps = 1/415 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  + + ++ +G +P L+TY  +V  L ++        L++K+E+  ++P  +++ 
Sbjct: 201 KASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYT 260

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I+   ++ ++D+A+ +F++M+  G +P   TY++LI    N G+  ++ +LL  M + 
Sbjct: 261 TIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K + P+  T++ L+ A+  +  + EA  +  +MV   I P  VTY++L   +  +     
Sbjct: 321 K-INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A+QM   M +    P+  +   ++ G+CK   +++ M     M +  +  N V + +LI+
Sbjct: 380 AKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQ 439

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G     D D   +    M   GV P+++T++T++D     G + K   +F+ + ++ +EP
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
            I+ ++I+ +G  +AG+ +    +  ++   GV P+VV + T+ISG+C     + A +++
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           ++M E G  PN   Y TL+           + EL++ M   G     STI LV +
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 148/309 (47%), Gaps = 1/309 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  +A  + + +IE    P + T++ L+ A  ++ +      L  ++ K  +
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + ++++IN       +DEA ++F+ M    C P   +Y+TLIKG+    + +E ++
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGME 417

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + MSQ + +  N  TY  L++        + A  +  +MV+ G+ P+ +TYNTL    
Sbjct: 418 LFREMSQ-RGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+  +A  +   +Q +++ P   T  I++ G CK G +ED       +    V P++
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N++I GF      +  D     M+E G  P+   ++T++ A    G      E+  +
Sbjct: 537 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 596

Query: 301 MVKAGIEPD 309
           M   G   D
Sbjct: 597 MRSCGFAGD 605



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 87/196 (44%)

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
           E  ++DA+     M +    P+++ F+ L+     +   D V      M+  G+  +  T
Sbjct: 59  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYT 118

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           +S +++ +     +     +   M+K G EP+I   S L  GY  +    +A +++  M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
             G  PN V F T+I G     K   A+++ ++M   G  P+L TY  ++ G  +     
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 398 RAEELLQVMEEKGVRP 413
            A  LL  ME+  + P
Sbjct: 239 LAFILLNKMEQGKLEP 254


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 217/441 (49%), Gaps = 36/441 (8%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++++G  P L TY  L+     +KR +    ++ ++   G+KP+ I +NA+I+     G+
Sbjct: 267 MVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGD 326

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +++A +I  +M   G +     +NTL+ G    GK E++L+++Q M  +K V+P+ +TY+
Sbjct: 327 IEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM-MEKGVEPDSQTYS 385

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           +L+   C   ++  A+ ++ +M    + P  +TY+ +     + G       +L EM  N
Sbjct: 386 LLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMN 445

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            ++PN      +++ + KEG +E++   L RM+E  + P++  +NSLI GF   K  +  
Sbjct: 446 GLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEA 505

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP----------- 308
              L  M E  ++P+  T+   +D +S AG M      F++M+  G+ P           
Sbjct: 506 RTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEG 565

Query: 309 ------------------------DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
                                   D+  +S+L  G  R G+  +A  I + +++ G+ PN
Sbjct: 566 HCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPN 625

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
              + ++ISG C    + +A  + E+MC  GINP++ TY  L+ G  +A +  RA+ L  
Sbjct: 626 AFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFD 685

Query: 405 VMEEKGVRPKKSTIQLVADSW 425
            +E +G+ P   T   + D +
Sbjct: 686 DIEGRGLTPNCVTYAAMVDGY 706



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/512 (26%), Positives = 241/512 (47%), Gaps = 45/512 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +   GK  +A  I   ++E+G  P   TY+ L+    R +       L+ +++K  +
Sbjct: 353 LNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKL 412

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + ++ +IN     GN+     I ++M  +G KP    Y TL+  +   G+ EES  
Sbjct: 413 APTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRM 472

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+ M +++ + P+   YN L+  +C    +EEA   + +M+   ++P+A TY      Y
Sbjct: 473 ILERM-REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGY 531

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM---RFLYRMKELE-- 235
           ++ GE   A++   EM +  V PN      ++ G+CKEGN+ +A    RF+   + L+  
Sbjct: 532 SKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDV 591

Query: 236 ------VH------------------------PNLVVFNSLIKGFLDIKDSDGVDKALTL 265
                 +H                        PN   +NSLI G         VDKA  L
Sbjct: 592 QTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCK---QGNVDKASQL 648

Query: 266 MEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           +EE    G+ PD+VT++ ++D    AG + + + +FDD+   G+ P+   ++ +  GY +
Sbjct: 649 LEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCK 708

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           +  P  A  +L  M   GV P+  ++  +++  C   K ++A+ ++++M E G    + +
Sbjct: 709 SKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-S 767

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           + TL+ GY ++ +   A  LL+ M EK   P   T   + D     G+  EAKR+    +
Sbjct: 768 FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQ 827

Query: 443 EDRQSMPNKKDEIA-VESIHRKQNLSASNSTF 473
           E R  MP  K   + +   H   N+S  ++ F
Sbjct: 828 E-RNVMPTAKTYTSLLHGYHNIGNMSEVSALF 858



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 200/407 (49%), Gaps = 1/407 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   +A  I + ++  G    LI + TL+  + +  + +  L ++ ++ + G++PDS  
Sbjct: 324 QGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQT 383

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +I       N+  A ++  +MK     PT  TY+ +I G    G  + +  +L+ M 
Sbjct: 384 YSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMV 443

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +  +KPN   Y  L+ A   +  +EE+  ++ +M   GI PD   YN+L   + +    
Sbjct: 444 MN-GLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRM 502

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A   L EM   ++RPN  T G  + GY K G ME A R+   M    V PN+ ++ +L
Sbjct: 503 EEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTAL 562

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I+G     +          +    V  DV T+S ++   S  G M +   IF ++ + G+
Sbjct: 563 IEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGL 622

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+   ++ L  G  + G   KA  +L  M   G++P++V +  +I G C A +++RA +
Sbjct: 623 LPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKN 682

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           +++ +   G+ PN  TY  ++ GY ++K P  A +LL+ M  +GV P
Sbjct: 683 LFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPP 729



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 115/457 (25%), Positives = 216/457 (47%), Gaps = 16/457 (3%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  E+  I   + E+G  P +  Y +L+    + KR +   + + ++ +  ++P++  
Sbjct: 464 EGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHT 523

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           + A I+  S++G ++ A + F +M   G  P    Y  LI+G+   G   E+  + + + 
Sbjct: 524 YGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI- 582

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             + V  + +TY++L+        + EA+ +  ++   G+ P+A TYN+L     + G  
Sbjct: 583 LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV 642

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A Q+L EM    + P+  T  I++ G CK G +E A      ++   + PN V + ++
Sbjct: 643 DKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAM 702

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + G+   K+     + L  M   GV PD   ++ I++         K  ++F +M++ G 
Sbjct: 703 VDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF 762

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
              +  F+ L +GY ++G+ Q+A  +L  M +    PN V +T++I   C A  M  A  
Sbjct: 763 ASTVS-FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKR 821

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           ++ +M E  + P  KTY +LL GY           L + M  KG+ P K T  ++ D++ 
Sbjct: 822 LWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYC 881

Query: 427 AIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRK 463
             G   EA ++              KDEI V+ +  K
Sbjct: 882 REGNVMEACKL--------------KDEILVKGMPMK 904



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/442 (25%), Positives = 211/442 (47%), Gaps = 19/442 (4%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV----- 80
           RP+L++  +L+  L +  + +    +   +    + PD   +  MI+A  + GNV     
Sbjct: 186 RPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKR 245

Query: 81  ------------DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
                       DEA+++ + M D G  P   TY+ LI G+    +  E+ KL+ L   D
Sbjct: 246 VLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREA-KLMLLEMID 304

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
             +KP   TYN L+  +  +  IE+A+ +  +MVA GI+ + + +NTL     + G+  +
Sbjct: 305 VGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEK 364

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A +++ EM    V P+ +T  +++ G+C+  NM  A   L  MK+ ++ P ++ ++ +I 
Sbjct: 365 ALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIIN 424

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G     +  G +  L  M   G+KP+ V ++T+M A +  G + + + I + M + GI P
Sbjct: 425 GLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILP 484

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D+  ++ L  G+ +A   ++A + L  M +  + PN   +   I G+  A +M+ A   +
Sbjct: 485 DVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYF 544

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            +M   G+ PN+  Y  L+ G+ +      A  + + +  + V     T  ++       
Sbjct: 545 NEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRN 604

Query: 429 GLAREAKRVLKSAEEDRQSMPN 450
           G   EA  +    +E +  +PN
Sbjct: 605 GKMHEAFGIFSELQE-KGLLPN 625



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 180/370 (48%), Gaps = 8/370 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK HEA  IF+ L E+G  P   TY +L++   +Q        L+ ++   G+ PD + +
Sbjct: 605 GKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTY 664

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I+   ++G ++ A  +F  ++  G  P   TY  ++ GY     P  + +LL+ M  
Sbjct: 665 NILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLL 724

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + V P+   YN+++   C +   E+A ++  +M+  G     V++NTL   Y + G+  
Sbjct: 725 -RGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQ 782

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +L EM   Q  PN  T   ++   CK G M +A R    M+E  V P    + SL+
Sbjct: 783 EANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLL 842

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV----- 302
            G+ +I +   V      M   G++PD +T+  ++DA+   G + +  ++ D+++     
Sbjct: 843 HGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMP 902

Query: 303 -KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
            K+G    +   S++A+G+  AG   +A  +L SM K+G   N      ++ G  N    
Sbjct: 903 MKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANS 962

Query: 362 QRAMSIYEKM 371
           + + ++ ++M
Sbjct: 963 EDSDNLLKQM 972



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 194/395 (49%), Gaps = 24/395 (6%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P+S++F+ ++++  + G + EA+ +F   K+   +P+  + N+L+       K E   K+
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK-----------------MVAS 164
              M   K V P+  TY  ++ A C   ++++A  V+ +                 MV  
Sbjct: 212 FDGMCAHK-VLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDK 270

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           G+ PD  TY+ L   +     +  A+ ML EM +  ++P   T   ++ G+ ++G++E A
Sbjct: 271 GLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQA 330

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTI 281
            R    M    +  NL+++N+L+ G   +  +  ++KAL +M+E    GV+PD  T+S +
Sbjct: 331 FRIKDEMVACGIEANLIIWNTLLNG---VCKAGKMEKALEIMQEMMEKGVEPDSQTYSLL 387

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           ++       M +  E+ D+M K  + P +  +S++  G  R G  Q   +IL  M   G+
Sbjct: 388 IEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGL 447

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
            PN V++TT+++      +++ +  I E+M E GI P++  Y +L+ G+ +AK+   A  
Sbjct: 448 KPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEART 507

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            L  M E+ +RP   T     D +   G    A R
Sbjct: 508 YLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADR 542



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 8/126 (6%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   E   +F  ++ +G  P  +TY  ++ A  R+        L  ++   GM P    F
Sbjct: 849 GNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGM-PMKSGF 907

Query: 68  NAMINACSE-------SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
              +  CS        +GN+DEA ++ + M   G    T++   L+ G  N    E+S  
Sbjct: 908 RLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDN 967

Query: 121 LLQLMS 126
           LL+ M+
Sbjct: 968 LLKQMA 973


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 229/469 (48%), Gaps = 1/469 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  +A  +F  +I     PT+I ++ L +A+ + K++  +L+L  ++E  G+  +    +
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            MIN       +  A     K+   G +P T T++TLI G    G+  E+L+L+  M + 
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
            + KP+  T N LV   C      EA  ++ KMV  G QP+AVTY  +     + G+T  
Sbjct: 286 GH-KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 344

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A ++L +M+   ++ +     II+ G CK G++++A      M+   +  N++ +N LI 
Sbjct: 345 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 404

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           GF +    D   K L  M +  + P+VVTFS ++D++   G + + +E+  +M+  GI P
Sbjct: 405 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 464

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D   ++ L  G+ +     KA  ++  M   G  PN+  F  +I+G+C A ++   + ++
Sbjct: 465 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 524

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            KM   G+  +  TY TL+ G+ E  +   A+EL Q M  + V P   T +++ D     
Sbjct: 525 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 584

Query: 429 GLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIP 477
           G + +A  + +  E+ +  +      I +  +     +  +   F  +P
Sbjct: 585 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 633



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 217/423 (51%), Gaps = 1/423 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  EA  + + ++E G +P  +TY  ++  + +  +    + L+ K+E+  +
Sbjct: 298 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 357

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K D++ ++ +I+   + G++D A  +F +M+  G      TYN LI G+ N G+ ++  K
Sbjct: 358 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 417

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M + K + PN  T+++L+ ++  +  + EA  +  +M+  GI PD +TY +L   +
Sbjct: 418 LLRDMIKRK-INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 476

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +     +A QM+  M +    PN RT  I+++GYCK   ++D +    +M    V  + 
Sbjct: 477 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 536

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+LI+GF ++   +   +    M    V P++VT+  ++D     G   K  EIF+ 
Sbjct: 537 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 596

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           + K+ +E DI +++I+  G   A +   A  +  S+   GV P V  +  +I G C    
Sbjct: 597 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 656

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ KM E G  P+  TY  L+  +       ++ +L++ ++  G     STI++
Sbjct: 657 LSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKM 716

Query: 421 VAD 423
           V D
Sbjct: 717 VID 719



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 221/446 (49%), Gaps = 14/446 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  EA  + + ++E GH+P LIT  TLV  L    +    + LI K+ + G 
Sbjct: 263 INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGC 322

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+++ +  ++N   +SG    AM++ +KM++   K     Y+ +I G    G  + +  
Sbjct: 323 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 382

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M   K +  N  TYNIL+  +C+    ++   ++  M+   I P+ VT++ L  ++
Sbjct: 383 LFNEMEM-KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 441

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   AE++  EM +  + P+  T   ++ G+CKE +++ A + +  M      PN+
Sbjct: 442 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 501

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             FN LI G+     ++ +D  L L  +    GV  D VT++T++  +   G +   +E+
Sbjct: 502 RTFNILINGYC---KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 558

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F +MV   + P+I  + IL  G    GE +KA  I   + K  +  ++ ++  +I G CN
Sbjct: 559 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 618

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           A K+  A  ++  +   G+ P +KTY  ++ G  +      AE L + MEE G  P   T
Sbjct: 619 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 678

Query: 418 IQLV-------ADSWRAIGLAREAKR 436
             ++        D+ +++ L  E KR
Sbjct: 679 YNILIRAHLGDGDATKSVKLIEELKR 704



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/428 (25%), Positives = 211/428 (49%), Gaps = 1/428 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +I+ G+ P  IT++TL+  L  + R    L L+ ++ + G KPD I  N ++N    SG 
Sbjct: 247 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 306

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             EAM +  KM + GC+P   TY  ++      G+   +++LL+ M +++N+K +   Y+
Sbjct: 307 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKYS 365

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           I++   C   S++ A+N+  +M   GI  + +TYN L   +   G      ++L +M   
Sbjct: 366 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 425

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           ++ PN  T  +++  + KEG + +A      M    + P+ + + SLI GF      D  
Sbjct: 426 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 485

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
           ++ + LM   G  P++ TF+ +++ +  A  +    E+F  M   G+  D   ++ L +G
Sbjct: 486 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 545

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           +   G+   A+ +   M    V PN+V +  ++ G C+  + ++A+ I+EK+ +  +  +
Sbjct: 546 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 605

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           +  Y  ++ G   A +   A +L   +  KGV+P   T  ++       G   EA+ + +
Sbjct: 606 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 665

Query: 440 SAEEDRQS 447
             EED  +
Sbjct: 666 KMEEDGHA 673



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 133/287 (46%), Gaps = 7/287 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            V +GK  EA  +   +I  G  P  ITYT+L+    ++        ++  +   G  P+
Sbjct: 441 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 500

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              FN +IN   ++  +D+ +++F+KM   G    T TYNTLI+G+  +GK   + +L Q
Sbjct: 501 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 560

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K V PN  TY IL+   C     E+A  +  K+  S ++ D   YN +       
Sbjct: 561 EMVSRK-VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 619

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +   A  +   +    V+P  +T  I++ G CK+G + +A     +M+E    P+   +
Sbjct: 620 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 679

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSS 287
           N LI+  L   D D   K++ L+EE    G   D  T   ++D  S 
Sbjct: 680 NILIRAHL--GDGDAT-KSVKLIEELKRCGFSVDASTIKMVIDMLSD 723



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 90/397 (22%), Positives = 162/397 (40%), Gaps = 43/397 (10%)

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M+  G  PT +   ++I    N+  P +  + L LM++    +P DR             
Sbjct: 38  MRSLGGNPTQAQLKSIIASE-NLSSPFDFNRFLDLMAKHLKTEPFDR------------- 83

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            + +A+ V+ K   +G     V    L       GE              ++ PNE    
Sbjct: 84  QLRDAFKVLDKE-GTGF----VAVADLRHILTSIGE--------------KLEPNEFDEW 124

Query: 210 IIVSGYCKEGNM--EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
           I       +G +  ED   F+ RM  +    NL     L  G +DIK  D +D    ++ 
Sbjct: 125 IKEVDVGSDGKIRYED---FIARM--VANDRNLSYRERLRSGLVDIKADDAIDLFRDMIH 179

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
              + P V+ FS +  A +          +   M   GI  +++  SI+   + R  +  
Sbjct: 180 SRPL-PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLC 238

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            A S +  + K G  PN + F+T+I+G C   ++  A+ + ++M E+G  P+L T  TL+
Sbjct: 239 LAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLV 298

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS 447
            G   + +   A  L+  M E G +P   T   V +     G    A  +L+  EE    
Sbjct: 299 NGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 358

Query: 448 MPNKKDEIAVESIHRKQNLSASNSTF--LQIPGVVSS 482
           +   K  I ++ + +  +L  + + F  +++ G+ ++
Sbjct: 359 LDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 395


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 231/469 (49%), Gaps = 54/469 (11%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK-DG 59
           MN L  +G+  EA  + + ++E+G +PT ITY T+V  + ++    S L+L+ K+E+   
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSH 250

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + P+ ++++A+I++  + G   +A  +F +M++ G  P   TYN++I G+ + G+  ++ 
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +LLQ M + K + P+  TYN L+ A+  +    EA  +  +M+  GI P+ +TYN++   
Sbjct: 311 QLLQEMLERK-ISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG 369

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + +      AE M + M      P+  T   ++ GYC    ++D M  L+ M    +  N
Sbjct: 370 FCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN 429

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            V +N+LI GF  + D   ++ AL L ++    GV PD+VT +T++D     G +    E
Sbjct: 430 TVTYNTLIHGFCLVGD---LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 486

Query: 297 IFDDMVKA-----------GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV---- 341
           +F  M K+           G+EPD+  ++IL  G +  G+  +AE +   M   G+    
Sbjct: 487 MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 342 -------------------------------HPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
                                           PNVV F T+I+G+C A ++   + ++ +
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCE 606

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           M   GI  +   Y TL++G+ +      A ++ Q M   GV P   TI+
Sbjct: 607 MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIR 655



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 207/439 (47%), Gaps = 18/439 (4%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P ++T+TTL+  L  + R    L    ++ +   +P+ + F  ++N     G + EA
Sbjct: 144 GLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA 203

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +  +M + G +PT  TY T++ G    G    +L LL+ M +  ++ PN   Y+ ++ 
Sbjct: 204 VALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIID 263

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C      +A N+  +M   GI PD  TYN++   +   G    AEQ+L EM   ++ P
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   +++ + KEG   +A      M    + PN + +NS+I GF      D  +   
Sbjct: 324 DVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMF 383

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            LM   G  PDV TF+T++D +  A  +    E+  +M + G+  +   ++ L  G+   
Sbjct: 384 YLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLV 443

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI--------- 374
           G+   A  +   M   GV P++V   T++ G C+  K++ A+ +++ M +          
Sbjct: 444 GDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHP 503

Query: 375 --GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
             G+ P++ TY  L+ G     +   AEEL + M  +G+ P   T   + D     GL +
Sbjct: 504 FNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID-----GLCK 558

Query: 433 EAKRVLKSAEEDRQSMPNK 451
           +++  L  A +   SM +K
Sbjct: 559 QSR--LDEATQMFVSMGSK 575



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 207/439 (47%), Gaps = 2/439 (0%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
            +A  +F+ ++     P+++ +  L+  + R +R   ++SL  K+E+  ++ D   FN +
Sbjct: 61  EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNIL 120

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           I        +  A+  F K+   G  P   T+ TL+ G     +  E+L     M +   
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFE-TT 179

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
            +PN  T+  L+   C +  I EA  ++ +M+  G+QP  +TY T+     + G+T  A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 191 QMLFEMQN-NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
            +L +M+  + + PN      I+   CK+G   DA      M+E  + P+L  +NS+I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 250 FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
           F         ++ L  M E  + PDVVT++ +++A+   G   +  E++D+M+  GI P+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 359

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
              ++ +  G+ +      AE +   M   G  P+V  FTT+I G+C A ++   M +  
Sbjct: 360 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 419

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           +M   G+  N  TY TL+ G+        A +L Q M   GV P   T   + D     G
Sbjct: 420 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 479

Query: 430 LAREAKRVLKSAEEDRQSM 448
             ++A  + K+ ++ +  +
Sbjct: 480 KLKDALEMFKAMQKSKMDL 498



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 216/466 (46%), Gaps = 26/466 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M ++V   +P     ++  +  +  R  + ++  L+       +    LS   K+ K G+
Sbjct: 86  MGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGL 145

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + F  +++       V EA+  F +M ++ C+P   T+ TL+ G    G+  E++ 
Sbjct: 146 HPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVA 205

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM-VASGIQPDAVTYNTLARA 179
           LL  M +D  ++P   TY  +V   C K     A N++ KM   S I P+ V Y+ +  +
Sbjct: 206 LLDRMMED-GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G    A+ +  EMQ   + P+  T   ++ G+C  G   DA + L  M E ++ P+
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           +V +N+LI  F  +K+    + A  L +E    G+ P+ +T+++++D +     +   ++
Sbjct: 325 VVTYNALINAF--VKEGKFFEAA-ELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAED 381

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F  M   G  PD+  F+ L  GY  A        +L  M + G+  N V + T+I G+C
Sbjct: 382 MFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 441

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK------- 409
               +  A+ + ++M   G+ P++ T  TLL G  +  +   A E+ + M++        
Sbjct: 442 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 501

Query: 410 ----GVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
               GV P   T  ++       GL  E K +   AEE  + MP++
Sbjct: 502 HPFNGVEPDVLTYNIL-----ICGLINEGKFL--EAEELYEEMPHR 540



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 98/415 (23%), Positives = 201/415 (48%), Gaps = 12/415 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  +A  +F  + E+G  P L TY +++       R+     L+ ++ +  + PD
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +NA+INA  + G   EA +++ +M   G  P T TYN++I G+    + + +  +  
Sbjct: 325 VVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFY 384

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           LM+  K   P+  T+  L+  +C    I++   ++++M   G+  + VTYNTL   +   
Sbjct: 385 LMAT-KGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLV 443

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-------- 235
           G+   A  +  +M ++ V P+  TC  ++ G C  G ++DA+     M++ +        
Sbjct: 444 GDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHP 503

Query: 236 ---VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMG 292
              V P+++ +N LI G ++       ++    M   G+ PD +T+S+++D       + 
Sbjct: 504 FNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           +  ++F  M      P++  F+ L  GY +AG       +   M + G+  + +++ T+I
Sbjct: 564 EATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLI 623

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
            G+     +  A+ I+++M   G+ P+  T   +L G+   ++  RA  +L+ ++
Sbjct: 624 YGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 192/389 (49%), Gaps = 4/389 (1%)

Query: 43  KRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTY 102
           K  +  + L S + +    P  + F  ++         D  + ++QKM+    +    ++
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 103 NTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV 162
           N LIK + +  K   +L     +++   + P+  T+  L+   C ++ + EA +  ++M 
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITK-LGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176

Query: 163 ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNME 222
            +  +P+ VT+ TL     + G    A  +L  M  + ++P + T G IV G CK+G+  
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 223 DAMRFLYRMKEL-EVHPNLVVFNSLIKGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFST 280
            A+  L +M+E+  + PN+V+++++I     D + SD      T M+E G+ PD+ T+++
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDA-QNLFTEMQEKGIFPDLFTYNS 295

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++  + S+G     +++  +M++  I PD+  ++ L   +V+ G+  +A  +   M   G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRG 355

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
           + PN + + ++I G+C   ++  A  ++  M   G +P++ T+ TL+ GY  AK+     
Sbjct: 356 IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGM 415

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           ELL  M  +G+     T   +   +  +G
Sbjct: 416 ELLHEMPRRGLVANTVTYNTLIHGFCLVG 444



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 169/351 (48%), Gaps = 2/351 (0%)

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           E   +++A+ +F  M  S   P+   +  L+     + +P+  + L Q M + K ++ + 
Sbjct: 56  EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMER-KQIRCDI 114

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            ++NIL++ +CS + +  A +   K+   G+ PD VT+ TL            A     +
Sbjct: 115 YSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQ 174

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M     RPN  T   +++G C+EG + +A+  L RM E  + P  + + +++ G     D
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234

Query: 256 SDGVDKALTLMEEFG-VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           +      L  MEE   + P+VV +S I+D+    G     Q +F +M + GI PD+  ++
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            +  G+  +G    AE +L  M +  + P+VV +  +I+ +    K   A  +Y++M   
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPR 354

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           GI PN  TY +++ G+ +  +   AE++  +M  KG  P   T   + D +
Sbjct: 355 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGY 405



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 161/351 (45%), Gaps = 18/351 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N  V +GK  EA  +++ ++  G  P  ITY +++    +Q R  +   +   +   G 
Sbjct: 332 INAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGC 391

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   F  +I+    +  +D+ M++  +M   G    T TYNTLI G+  VG    +L 
Sbjct: 392 SPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALD 451

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS-----------GIQPD 169
           L Q M     V P+  T N L+   C    +++A  +   M  S           G++PD
Sbjct: 452 LSQQMIS-SGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPD 510

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
            +TYN L       G+   AE++  EM +  + P+  T   ++ G CK+  +++A +   
Sbjct: 511 VLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFV 570

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWS 286
            M      PN+V FN+LI G+     +  VD  L L  E    G+  D + + T++  + 
Sbjct: 571 SMGSKSFSPNVVTFNTLINGYC---KAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFR 627

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
             G +    +IF +M+ +G+ PD      +  G+    E ++A ++L  ++
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 6/208 (2%)

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           L  GF +IK   G++ A+ L  +       P VV F  +M              ++  M 
Sbjct: 50  LQSGFHEIK---GLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKME 106

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           +  I  DI+ F+IL K +    +   A S    + K G+HP+VV FTT++ G C   ++ 
Sbjct: 107 RKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVS 166

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A+  + +M E    PN+ T+ TL+ G     +   A  LL  M E G++P + T   + 
Sbjct: 167 EALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226

Query: 423 DSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           D     G    A  +L+  EE    +PN
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPN 254



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 103/232 (44%), Gaps = 1/232 (0%)

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           SG+ +   +EDA+     M      P++V F  L+   + ++  D V      ME   ++
Sbjct: 52  SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            D+ +F+ ++  + S   +      F  + K G+ PD+  F+ L  G        +A   
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDF 171

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              M +    PNVV FTT+++G C   ++  A+++ ++M E G+ P   TY T++ G  +
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 393 AKQPWRAEELLQVMEE-KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
                 A  LL+ MEE   + P       + DS    G   +A+ +    +E
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 217/438 (49%), Gaps = 7/438 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  E  ++F+ +I EG +P ++TY TL+  L +     + + L+  +E+   +PD
Sbjct: 148 LCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPD 207

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++ ++I++  +   V +A  +F +M   G  P+  TYN+LI    N+ + +    LL 
Sbjct: 208 VVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLN 267

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K + PN   ++ +V A C +  + EA +VV  M+  G++P+ VTYN L   +   
Sbjct: 268 EMVNSK-IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLR 326

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E   A ++   M      P+  +   +++GYCK   +E AM     M   E+ PN V +
Sbjct: 327 SEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTY 386

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           ++L+ G   +     +  A+ L  E    G  PD V++  ++D       + +   +   
Sbjct: 387 STLMHGLCHVGR---LQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 443

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +  + ++PDI +++I+  G  RAGE + A  + +++   G+HPNV  +T +I+G C    
Sbjct: 444 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGL 503

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ +M   G +PN  TY  +  G+    +  R  +LLQ M  +G     ST  +
Sbjct: 504 LAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTV 563

Query: 421 VADSWRAIGLAREAKRVL 438
           + +     GL +  K++L
Sbjct: 564 LVEMLSDDGLDQSVKQIL 581



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 196/415 (47%), Gaps = 1/415 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P + T   L+ +    +R     S+++K+ K G +P+   FN +I      G + E 
Sbjct: 98  GIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEV 157

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +F KM   G +P   TY TLI G   VG    +++LL+ M Q  N +P+   Y  ++ 
Sbjct: 158 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQG-NCQPDVVVYTSIID 216

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C    + +A+N+  +M+  GI P   TYN+L  A     E      +L EM N+++ P
Sbjct: 217 SLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMP 276

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N      +V   CKEG + +A   +  M +  V PN+V +N+L+ G     + D   K  
Sbjct: 277 NVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVF 336

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M   G  PDVV++ST+++ +     + K   +F++M +  + P+   +S L  G    
Sbjct: 337 DTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHV 396

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G  Q A ++   M   G  P+ V +  ++   C   ++  A+++ + +    ++P+++ Y
Sbjct: 397 GRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIY 456

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             ++ G   A +   A +L   +  KG+ P   T  ++ +     GL  EA ++ 
Sbjct: 457 TIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLF 511



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 205/457 (44%), Gaps = 36/457 (7%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           FN ++     P++  +T L+ ++T+ K + ++LSL  +++  G+ P+    N +IN+   
Sbjct: 56  FNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCH 115

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
              +  A  +  K                               +L+L  Q     PN  
Sbjct: 116 LQRLGFAFSVLAK-------------------------------ILKLGHQ-----PNIA 139

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           T+N L+R  C +  I E  ++  KM+  G QP+ VTY TL     + G T  A ++L  M
Sbjct: 140 TFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSM 199

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
           +    +P+      I+   CK+  +  A      M    + P++  +NSLI    ++ + 
Sbjct: 200 EQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEW 259

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
             V   L  M    + P+VV FST++DA    G + +  ++ D M+K G+EP++  ++ L
Sbjct: 260 KHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNAL 319

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G+    E  +A  +  +M   G  P+VV ++T+I+G+C   ++++AM ++E+MC   +
Sbjct: 320 MDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKEL 379

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            PN  TY TL+ G     +   A  L   M  +G  P   +  ++ D         EA  
Sbjct: 380 IPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIA 439

Query: 437 VLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF 473
           +LK+ E        +   I ++ + R   L A+   F
Sbjct: 440 LLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLF 476



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 142/300 (47%), Gaps = 1/300 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EAH + + +I+ G  P ++TY  L+     +      + +   +   G  PD
Sbjct: 288 LCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPD 347

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + ++ +IN   +   +++AM +F++M      P T TY+TL+ G  +VG+ ++++ L  
Sbjct: 348 VVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFH 407

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M     + P+  +Y IL+   C    ++EA  ++  +  S + PD   Y  +     + 
Sbjct: 408 EMVTRGQI-PDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRA 466

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           GE   A  +   + +  + PN  T  I+++G C++G + +A +    MK     PN   +
Sbjct: 467 GELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTY 526

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N + +GFL   ++    + L  M   G   DV T + +++  S  GL    ++I  + ++
Sbjct: 527 NLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 586



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/300 (21%), Positives = 123/300 (41%), Gaps = 35/300 (11%)

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
           N++++A +   +M+     P    +  L  +  +         +  +M +  + PN  T 
Sbjct: 47  NTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTL 106

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK-------------------- 248
            I+++ +C    +  A   L ++ +L   PN+  FN+LI+                    
Sbjct: 107 NILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIG 166

Query: 249 ---------------GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
                          G   +  +    + L  ME+   +PDVV +++I+D+      + +
Sbjct: 167 EGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ 226

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
              +F +M+  GI P I  ++ L        E +   ++L  M    + PNVV+F+TV+ 
Sbjct: 227 AFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVD 286

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             C   K+  A  + + M + G+ PN+ TY  L+ G+    +   A ++   M  KG  P
Sbjct: 287 ALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAP 346


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 210/420 (50%), Gaps = 8/420 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  I   L   G  P +ITY  L+    +       L ++   E+  + PD + +
Sbjct: 155 GKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVL---ERMSVAPDVVTY 211

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++ +  +SG + EAM++  +     C P   TY  LI+   N     +++KLL  M +
Sbjct: 212 NTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRK 271

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K  KP+  TYN+L+   C +  ++EA   +  M + G +P+ +T+N + R+    G   
Sbjct: 272 -KGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWM 330

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            AE++L +M      P+  T  I+++  C++  +  A+  L +M +    PN + +N L+
Sbjct: 331 DAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLL 390

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            GF   K  D   + L +M   G  PD+VT++T++ A    G +    EI + +   G  
Sbjct: 391 HGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCS 450

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P +  ++ +  G  + G+ + A  +L  MR+ G+ P+++ ++T++ G     K+  A+ I
Sbjct: 451 PVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKI 510

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST----IQLVAD 423
           +  M  + I P+  TY  ++ G  +A+Q  RA + L  M EKG +P ++T    I+ +AD
Sbjct: 511 FHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIAD 570



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 195/396 (49%), Gaps = 3/396 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA-CSESGNVDEAMK 85
           P ++TY T++ +L    + K  + ++ +  +    PD I +  +I A C++SG V +AMK
Sbjct: 206 PDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSG-VGQAMK 264

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +  +M+  GCKP   TYN LI G    G+ +E++K L  M      KPN  T+NI++R+ 
Sbjct: 265 LLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS-YGCKPNVITHNIILRSM 323

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           CS     +A  ++  M+  G  P  VT+N L     +     RA  +L +M  +   PN 
Sbjct: 324 CSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNS 383

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            +   ++ G+C+E  M+ A+ +L  M     +P++V +N+L+         D   + L  
Sbjct: 384 LSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQ 443

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           +   G  P ++T++T++D  +  G      E+ ++M + G++PDI  +S L +G  R G+
Sbjct: 444 LSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGK 503

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A  I   M    + P+ V +  ++ G C A +  RA+     M E G  P   TY  
Sbjct: 504 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTI 563

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           L+ G  +      A ELL  +  +G   K S  Q+V
Sbjct: 564 LIEGIADEGLAEEALELLNELCSRGFVKKSSAEQVV 599



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 198/397 (49%), Gaps = 9/397 (2%)

Query: 39  LTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPT 98
           L R    +  L  + ++   G  PD I   ++I     SG   +A +I + +++SG  P 
Sbjct: 116 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPD 175

Query: 99  TSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVV 158
             TYN LI GY   G+ +++L++L+ MS    V P+  TYN ++R+ C    ++EA  V+
Sbjct: 176 VITYNVLIGGYCKSGEIDKALEVLERMS----VAPDVVTYNTILRSLCDSGKLKEAMEVL 231

Query: 159 YKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
            + +     PD +TY  L  A        +A ++L EM+    +P+  T  ++++G CKE
Sbjct: 232 DRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKE 291

Query: 219 GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTF 278
           G +++A++FL  M      PN++  N +++           ++ L+ M   G  P VVTF
Sbjct: 292 GRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTF 351

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           + +++      L+G+  ++ + M K G  P+   ++ L  G+ +  +  +A   L  M  
Sbjct: 352 NILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVS 411

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            G +P++V + T+++  C   K+  A+ I  ++   G +P L TY T++ G  +  +   
Sbjct: 412 RGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEY 471

Query: 399 AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           A ELL+ M  KG++P      ++  S    GL RE K
Sbjct: 472 AVELLEEMRRKGLKP-----DIITYSTLLRGLGREGK 503



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 175/363 (48%), Gaps = 4/363 (1%)

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
           +G ++E +K  ++M   G  P      +LI+G+   GK +++ ++++++     V P+  
Sbjct: 119 NGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAV-PDVI 177

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           TYN+L+  +C    I++A  V+ +M    + PD VTYNT+ R+    G+   A ++L   
Sbjct: 178 TYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQ 234

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
              +  P+  T  I++   C +  +  AM+ L  M++    P++V +N LI G       
Sbjct: 235 LQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 294

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           D   K L  M  +G KP+V+T + I+ +  S G     + +  DM++ G  P +  F+IL
Sbjct: 295 DEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNIL 354

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
                R     +A  +L  M K+G  PN + +  ++ G+C   KM RA+   E M   G 
Sbjct: 355 INFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGC 414

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            P++ TY TLL    +  +   A E+L  +  KG  P   T   V D    +G    A  
Sbjct: 415 YPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVE 474

Query: 437 VLK 439
           +L+
Sbjct: 475 LLE 477



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 146/286 (51%), Gaps = 1/286 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  +G+  EA    N +   G +P +IT+  ++ ++    R+     L+S + + G 
Sbjct: 285 INGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGC 344

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + FN +IN       +  A+ + +KM   GC P + +YN L+ G+    K + +++
Sbjct: 345 SPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIE 404

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L++M   +   P+  TYN L+ A C    ++ A  ++ ++ + G  P  +TYNT+    
Sbjct: 405 YLEIMVS-RGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGL 463

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+T  A ++L EM+   ++P+  T   ++ G  +EG +++A++  + M+ L + P+ 
Sbjct: 464 TKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSA 523

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
           V +N+++ G    + +      L  M E G KP   T++ +++  +
Sbjct: 524 VTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIA 569


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 230/439 (52%), Gaps = 9/439 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPT-LITYTTLVAALTRQKRFKSILSLISKVEKDG 59
           +  LV   + H+A+ IF   +   H  T  ITY TL+    +    +    L++++++ G
Sbjct: 76  LRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERG 135

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
             PD +  ++++ A   +GN+  AM+ F++  +  C P +  +N L+ G     +  E+ 
Sbjct: 136 HSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE--CAPDSVLFNILVHGLCKANQLSEAR 193

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           ++++ MS+ + + P+  TYN L+   C    +EEA  ++  MV   ++P+ VTYNTL   
Sbjct: 194 QMIEEMSE-RGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYG 252

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           Y + G T  A Q++  M  +   P+  T   ++SG+C++  ++ A   L+ MK+    PN
Sbjct: 253 YCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPN 312

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           LV +N LI G  D   ++   + L+ M+  G+ PD++T+++++  +     + +  +I +
Sbjct: 313 LVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQN 372

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            MV+ G+ PD   +  LA   +++    +A ++L +M   G  PN+  F +++ G C + 
Sbjct: 373 LMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSR 432

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           ++  A  +   M  +G +P   TYE L+ G  +A +   A+E+L +M  +G++P  S+  
Sbjct: 433 RLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSG 492

Query: 420 LVADSWRAIGLAREAKRVL 438
            +  +     LARE K+ L
Sbjct: 493 TIVHT-----LAREGKQDL 506



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 158/313 (50%), Gaps = 2/313 (0%)

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
           T N L++      +  ++ ++ +     ++   N  TYN L+  +C    +E A+ ++ +
Sbjct: 71  TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           M   G  PD VT++++ +A    G   RA Q   E  + +  P+     I+V G CK   
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE--SVECAPDSVLFNILVHGLCKANQ 188

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           + +A + +  M E  + P++V +NSLI G       +   + L  M +  V+P++VT++T
Sbjct: 189 LSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNT 248

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++  +   G  G   ++ + M+++G  PD+  F+ L  G+ +  +  KA  +L  M+K  
Sbjct: 249 LIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGL 308

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
             PN+V +  +ISG C+A +   A  +  +M   GI P++ TY +L+  +    Q  +A 
Sbjct: 309 CAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAF 368

Query: 401 ELLQVMEEKGVRP 413
           ++  +M E+GV P
Sbjct: 369 QIQNLMVERGVIP 381



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 164/348 (47%), Gaps = 7/348 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P  + +  LV  L +  +      +I ++ + G+ PD + +N++I+   +S  ++EA ++
Sbjct: 171 PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQL 230

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            + M     +P   TYNTLI GY   G    + +L++ M Q     P+  T+N L+  +C
Sbjct: 231 LETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQ-SGTHPDVVTFNSLISGFC 289

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            K+ I++A  V++ M      P+ VTYN L       G    A ++L EM    + P+  
Sbjct: 290 QKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDII 349

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   ++  +C+   +E A +    M E  V P+ + + +L    L    S+  D+A  L+
Sbjct: 350 TYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALL---KSERFDEAFALL 406

Query: 267 E---EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           +   + G  P++ TF+++M+    +  + + + +   M + G +P    + +L  G  +A
Sbjct: 407 DNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKA 466

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
           G    A+ +L  M   G+ P V    T++       K   A+  ++++
Sbjct: 467 GRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQV 514



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 139/281 (49%), Gaps = 6/281 (2%)

Query: 172 TYNTLARAYAQYGETYRAEQMLF-EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           T N L R   +    ++A Q+   E+       N  T   ++ G+CK G+ME A + L  
Sbjct: 71  TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE-FGVKPDVVTFSTIMDAWSSAG 289
           MKE    P++V  +S+++   +   +  + +A+    E     PD V F+ ++     A 
Sbjct: 131 MKERGHSPDVVTHSSIVQALCN---TGNLSRAMQYFRESVECAPDSVLFNILVHGLCKAN 187

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
            + + +++ ++M + GI PD+  ++ L  G  ++   ++A  +L +M K  V PN+V + 
Sbjct: 188 QLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYN 247

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
           T+I G+C       A  + E+M + G +P++ T+ +L+ G+ +  +  +A E+L +M++ 
Sbjct: 248 TLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKG 307

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
              P   T  ++       G A EA  +L S  + R  +P+
Sbjct: 308 LCAPNLVTYNVLISGLCDAGRANEACELL-SEMDGRGILPD 347


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 226/472 (47%), Gaps = 43/472 (9%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE-------------------- 56
           FN ++     P +  +  L+AAL R K + S++S+  K+E                    
Sbjct: 92  FNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCH 151

Query: 57  ---------------KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTST 101
                          K G KP  I FN +IN     G + EAM+    +   G +PT  T
Sbjct: 152 LHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYT 211

Query: 102 YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
           +  ++ G   +GK   ++  ++ M +  + +P   +Y+I++ + C    + EA ++ Y M
Sbjct: 212 HTMIVNGLCKIGKTSAAIVWMKKMVE-LDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHM 270

Query: 162 VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM 221
            + GI P  VTYN+L       G+  +A  +  EM    ++P+  T  I+V   CKEG +
Sbjct: 271 RSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVV 330

Query: 222 EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTF 278
            +A+    +M ++ + P++V ++SLI G   +  S    ++ TL+ E     ++PDVVTF
Sbjct: 331 LEALSVFGKMIQIAMEPDIVTYSSLIHG---VCKSSLWKESSTLLNEMLSRNIRPDVVTF 387

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           S  +D +   G++ + Q I + M++ G+ P++  ++ L  GY    +  +A  +   M  
Sbjct: 388 SIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVN 447

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            G  P+V+ +  +I G+C + ++  A  ++++M   G+ PN  T+ TL+ G  +A +P+ 
Sbjct: 448 KGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYA 507

Query: 399 AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           A+EL + M   G  P   T   +   +   G   EA  + ++ ++  Q  PN
Sbjct: 508 AKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKS-QLKPN 558



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 224/413 (54%), Gaps = 1/413 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  EA    + ++  G++PT+ T+T +V  L +  +  + +  + K+ +   
Sbjct: 181 INGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDC 240

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ + ++ +I++  ++  V+EA+ +F  M+  G  PT  TYN+LI G  N G+ +++  
Sbjct: 241 EPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASI 300

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M  + N+KP+  T++ILV A C +  + EA +V  KM+   ++PD VTY++L    
Sbjct: 301 LFKEM-LEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGV 359

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      +  +L EM +  +RP+  T  I V  +CK+G + +A   +  M E  + PN+
Sbjct: 360 CKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNV 419

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +NSL+ G+      D   K   +M   G  PDV++++ ++  +  +  + + +++FD+
Sbjct: 420 VTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDE 479

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G+ P+    + L  G  +AG P  A+ +   M  +G  P+++ ++T++SG+C    
Sbjct: 480 MSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGH 539

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           +  A++++E + +  + PN    + LL G  +A +   A+EL   +  + ++P
Sbjct: 540 LDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQP 592



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 103/261 (39%), Gaps = 38/261 (14%)

Query: 216 CKEG---NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           CK G   N +DA+ +  +M  +   P +  FN L+   + +K  D V      ME FGV 
Sbjct: 77  CKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVS 136

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
             V T + +++      L+G    +   + K G +P I  F+ L  G    G   +A   
Sbjct: 137 CSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQ 196

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE------------------- 373
           L  +   G  P V   T +++G C   K   A+   +KM E                   
Sbjct: 197 LDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCK 256

Query: 374 ----------------IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
                           IGI+P + TY +L++G   + Q  +A  L + M E  ++P   T
Sbjct: 257 NRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVT 316

Query: 418 IQLVADSWRAIGLAREAKRVL 438
             ++ D+    G+  EA  V 
Sbjct: 317 FSILVDALCKEGVVLEALSVF 337


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 217/438 (49%), Gaps = 7/438 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  E  ++F+ +I EG +P ++TY TL+  L +     + + L+  +E+   +PD
Sbjct: 139 LCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPD 198

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++ ++I++  +   V +A  +F +M   G  P+  TYN+LI    N+ + +    LL 
Sbjct: 199 VVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLN 258

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K + PN   ++ +V A C +  + EA +VV  M+  G++P+ VTYN L   +   
Sbjct: 259 EMVNSK-IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLR 317

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E   A ++   M      P+  +   +++GYCK   +E AM     M   E+ PN V +
Sbjct: 318 SEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTY 377

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           ++L+ G   +     +  A+ L  E    G  PD V++  ++D       + +   +   
Sbjct: 378 STLMHGLCHVGR---LQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 434

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +  + ++PDI +++I+  G  RAGE + A  + +++   G+HPNV  +T +I+G C    
Sbjct: 435 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGL 494

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ +M   G +PN  TY  +  G+    +  R  +LLQ M  +G     ST  +
Sbjct: 495 LAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTV 554

Query: 421 VADSWRAIGLAREAKRVL 438
           + +     GL +  K++L
Sbjct: 555 LVEMLSDDGLDQSVKQIL 572



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 196/415 (47%), Gaps = 1/415 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P + T   L+ +    +R     S+++K+ K G +P+   FN +I      G + E 
Sbjct: 89  GIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEV 148

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +F KM   G +P   TY TLI G   VG    +++LL+ M Q  N +P+   Y  ++ 
Sbjct: 149 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQG-NCQPDVVVYTSIID 207

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C    + +A+N+  +M+  GI P   TYN+L  A     E      +L EM N+++ P
Sbjct: 208 SLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMP 267

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N      +V   CKEG + +A   +  M +  V PN+V +N+L+ G     + D   K  
Sbjct: 268 NVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVF 327

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M   G  PDVV++ST+++ +     + K   +F++M +  + P+   +S L  G    
Sbjct: 328 DTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHV 387

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G  Q A ++   M   G  P+ V +  ++   C   ++  A+++ + +    ++P+++ Y
Sbjct: 388 GRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIY 447

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             ++ G   A +   A +L   +  KG+ P   T  ++ +     GL  EA ++ 
Sbjct: 448 TIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLF 502



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 205/457 (44%), Gaps = 36/457 (7%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           FN ++     P++  +T L+ ++T+ K + ++LSL  +++  G+ P+    N +IN+   
Sbjct: 47  FNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCH 106

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
              +  A  +  K                               +L+L  Q     PN  
Sbjct: 107 LQRLGFAFSVLAK-------------------------------ILKLGHQ-----PNIA 130

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           T+N L+R  C +  I E  ++  KM+  G QP+ VTY TL     + G T  A ++L  M
Sbjct: 131 TFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSM 190

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
           +    +P+      I+   CK+  +  A      M    + P++  +NSLI    ++ + 
Sbjct: 191 EQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEW 250

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
             V   L  M    + P+VV FST++DA    G + +  ++ D M+K G+EP++  ++ L
Sbjct: 251 KHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNAL 310

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G+    E  +A  +  +M   G  P+VV ++T+I+G+C   ++++AM ++E+MC   +
Sbjct: 311 MDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKEL 370

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            PN  TY TL+ G     +   A  L   M  +G  P   +  ++ D         EA  
Sbjct: 371 IPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIA 430

Query: 437 VLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF 473
           +LK+ E        +   I ++ + R   L A+   F
Sbjct: 431 LLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLF 467



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 142/300 (47%), Gaps = 1/300 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EAH + + +I+ G  P ++TY  L+     +      + +   +   G  PD
Sbjct: 279 LCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPD 338

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + ++ +IN   +   +++AM +F++M      P T TY+TL+ G  +VG+ ++++ L  
Sbjct: 339 VVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFH 398

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M     + P+  +Y IL+   C    ++EA  ++  +  S + PD   Y  +     + 
Sbjct: 399 EMVTRGQI-PDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRA 457

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           GE   A  +   + +  + PN  T  I+++G C++G + +A +    MK     PN   +
Sbjct: 458 GELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTY 517

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N + +GFL   ++    + L  M   G   DV T + +++  S  GL    ++I  + ++
Sbjct: 518 NLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 577



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/300 (21%), Positives = 123/300 (41%), Gaps = 35/300 (11%)

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
           N++++A +   +M+     P    +  L  +  +         +  +M +  + PN  T 
Sbjct: 38  NTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTL 97

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK-------------------- 248
            I+++ +C    +  A   L ++ +L   PN+  FN+LI+                    
Sbjct: 98  NILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIG 157

Query: 249 ---------------GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
                          G   +  +    + L  ME+   +PDVV +++I+D+      + +
Sbjct: 158 EGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ 217

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
              +F +M+  GI P I  ++ L        E +   ++L  M    + PNVV+F+TV+ 
Sbjct: 218 AFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVD 277

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             C   K+  A  + + M + G+ PN+ TY  L+ G+    +   A ++   M  KG  P
Sbjct: 278 ALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAP 337


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 212/428 (49%), Gaps = 8/428 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L   GK  EAH++   +  +G  P +++YTT++         + ++ L+ +++  G+
Sbjct: 117 MNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGL 176

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP+   ++++I    +SG V E  K+ ++M   G  P    Y TLI G+  +G  + + K
Sbjct: 177 KPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYK 236

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M + + + P+   ++ L+        + EA  +  +M+  G +PD VTY  L   Y
Sbjct: 237 LFSEM-EAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGY 295

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + GE  +A  +  +M    + PN  T   +  G CK G ++ A   L+ M    +  N+
Sbjct: 296 CKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNI 355

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +N+++ G     +     K +  M+E G+ PD +T++T+MDA+   G M K +E+  +
Sbjct: 356 STYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLRE 415

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  G++P +  F++L  G   +G+ +  E +L  M + G+ PN   + +++  +C    
Sbjct: 416 MLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNN 475

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ +  IY  MC  G+ P+  TY  L+ G+ +A+    A  L + M EK          L
Sbjct: 476 MRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEK-------RFNL 528

Query: 421 VADSWRAI 428
            A S+ A+
Sbjct: 529 TASSYNAL 536



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 222/449 (49%), Gaps = 38/449 (8%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALT-RQKRFKSILSLISKVEKDGMK 61
           +LV  G  +EA   F+ L+  G   +  +    +  L+ ++     +L + S+  + G+ 
Sbjct: 48  VLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVC 107

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
            ++  +N ++N+    G + EA  +  +M+  GC P   +Y T+I GY +VG+ ++ ++L
Sbjct: 108 WNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQL 167

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           ++ M Q K +KPN  TY+ ++   C    + E   V+ +M+  G+ PD V Y TL   + 
Sbjct: 168 VKEM-QLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFC 226

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           + G T  A ++  EM+  ++ P+      ++ G    G + +A +               
Sbjct: 227 KLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADK--------------- 271

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
           +FN +IK                     G +PD VT++ ++D +   G M K   + + M
Sbjct: 272 LFNEMIKK--------------------GFEPDEVTYTALIDGYCKLGEMKKAFFLHNQM 311

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           V+ G+ P++  ++ LA G  ++GE   A  +L  M + G+  N+  + T+++G C A  +
Sbjct: 312 VQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNI 371

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            +A+ + E+M E G++P+  TY TL+  Y +  +  +A ELL+ M ++G++P   T  ++
Sbjct: 372 LQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVL 431

Query: 422 ADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            +     G   + +R+LK   E +  MPN
Sbjct: 432 MNGLCMSGKLEDGERLLKWMLE-KGIMPN 459



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 196/389 (50%), Gaps = 5/389 (1%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D  +F+       E+G ++EA K F K+ + G   +  + N  +    +  K +    +L
Sbjct: 38  DPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSS--KRDMLGMVL 95

Query: 123 QLMSQ--DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           ++ S+     V  N  +YNIL+ +      I EA +++ +M   G  PD V+Y T+   Y
Sbjct: 96  KVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGY 155

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              GE  +  Q++ EMQ   ++PN  T   I+   CK G + +  + L  M +  V P+ 
Sbjct: 156 CHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDH 215

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V++ +LI GF  + ++    K  + ME   + PD + FS ++   S +G + +  ++F++
Sbjct: 216 VIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNE 275

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+K G EPD   ++ L  GY + GE +KA  +   M + G+ PNVV +T +  G C + +
Sbjct: 276 MIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGE 335

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  +  +MC  G+  N+ TY T++ G  +A    +A +L++ M+E G+ P   T   
Sbjct: 336 LDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTT 395

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMP 449
           + D++   G   +A+ +L+    DR   P
Sbjct: 396 LMDAYYKTGEMVKARELLREM-LDRGLQP 423



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 173/376 (46%), Gaps = 40/376 (10%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           +L   GK  E   +   +++ G  P  + YTTL+    +    ++   L S++E   + P
Sbjct: 189 LLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVP 248

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           DSI F+A+I   S SG V EA K+F +M   G +P   TY  LI GY  +G+ +++  L 
Sbjct: 249 DSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLH 308

Query: 123 QLMSQ----------------------------------DKNVKPNDRTYNILVRAWCSK 148
             M Q                                   K ++ N  TYN +V   C  
Sbjct: 309 NQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKA 368

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
            +I +A  ++ +M  +G+ PD +TY TL  AY + GE  +A ++L EM +  ++P   T 
Sbjct: 369 GNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTF 428

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL---DIKDSDGVDKALTL 265
            ++++G C  G +ED  R L  M E  + PN   +NS++K +    +++ S  + + +  
Sbjct: 429 NVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCA 488

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
               GV PD  T++ ++     A  M +   +  +MV+         ++ L KG+ +  +
Sbjct: 489 Q---GVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKK 545

Query: 326 PQKAESILTSMRKYGV 341
             +A  +   MR+ G+
Sbjct: 546 LLEARQLFEEMRREGL 561



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 148/296 (50%), Gaps = 1/296 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A ++ N +++ G  P ++TYT L   L +     +   L+ ++ + G++ +   +
Sbjct: 299 GEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTY 358

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++N   ++GN+ +A+K+ ++MK++G  P T TY TL+  Y   G+  ++ +LL+ M  
Sbjct: 359 NTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREM-L 417

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D+ ++P   T+N+L+   C    +E+   ++  M+  GI P+A TYN++ + Y       
Sbjct: 418 DRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMR 477

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            + ++   M    V P+  T  I++ G+CK  NM++A      M E   +     +N+LI
Sbjct: 478 ISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALI 537

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           KGF   K      +    M   G+      ++  +D     G M    E+ D+ ++
Sbjct: 538 KGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIE 593



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 117/238 (49%), Gaps = 11/238 (4%)

Query: 226 RFLYRMKELEVHPNL--VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD 283
           R +Y  K+    P++  V F  L++  L  +     DK L     +GV     + +  + 
Sbjct: 27  RLIYTYKDWGSDPHVFDVFFQVLVEAGLLNEARKFFDKLLN----YGVALSAGSCNLYLT 82

Query: 284 AWSSA-GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
             SS   ++G   ++F +  + G+  +   ++IL     R G+ ++A  +L  M   G  
Sbjct: 83  CLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCI 142

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           P+VV +TT+I G+C+  ++Q+ + + ++M   G+ PNL TY +++    ++ +    E++
Sbjct: 143 PDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKV 202

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESI 460
           L+ M ++GV P       + D +  +G  + A ++  S  E R+ +P   D IA  ++
Sbjct: 203 LREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLF-SEMEAREIVP---DSIAFSAL 256



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 1/142 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L   GK  +   +   ++E+G  P   TY +++     +   +    +   +   G+
Sbjct: 432 MNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGV 491

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PDS  +N +I    ++ N+ EA  + ++M +     T S+YN LIKG+    K  E+ +
Sbjct: 492 VPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQ 551

Query: 121 LLQLMSQDKNVKPNDRTYNILV 142
           L + M ++  V   +  YN+ V
Sbjct: 552 LFEEMRREGLVASAE-IYNLFV 572


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 199/392 (50%), Gaps = 1/392 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           + +++T+  ++  L ++ + K     I  +E  G+KP+ + +N +I+     G V+ A  
Sbjct: 188 KSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARM 247

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           IF  MK  G KP + TY + I G    GK EE+  +L+ M ++  ++P   TYN L+  +
Sbjct: 248 IFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKM-KEIGLRPTAVTYNTLIDGY 306

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C+K ++E A++   KMV  G+ P   TYN L  A     +   A+ ++ EM    + P+ 
Sbjct: 307 CNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDS 366

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T  I+++GYC+ GN++ A      M    + P  V + SLI            D     
Sbjct: 367 VTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEK 426

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           +   G+ PD++ F+ ++D   + G M +   +  +M +  + PD   F+ L +G  R G+
Sbjct: 427 IVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGK 486

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            + A  ++  M+  G+ P+ + + T+ISG+     M+ A  + ++M  IG NP L TY  
Sbjct: 487 VEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNA 546

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           L+ G  + ++   AE+LL+ M  KG+ P  +T
Sbjct: 547 LIQGLCKNEEGDHAEQLLKEMISKGITPNDNT 578



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 196/391 (50%), Gaps = 1/391 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+L  +GK  +A      +   G +P ++TY T++     + R +    +   ++  G+
Sbjct: 198 INVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGV 257

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPDS  + + I+   + G ++EA  + +KMK+ G +PT  TYNTLI GY N G  E +  
Sbjct: 258 KPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFD 317

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M ++  + P   TYN+L+ A      ++EA  ++ +M   G+ PD+VTYN L   Y
Sbjct: 318 YRDKMVRE-GLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGY 376

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G   +A  +  EM +  ++P   T   ++    K G M+ A     ++    + P+L
Sbjct: 377 CRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDL 436

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           ++FN+LI G     + D     L  M++  V PD VTF+T+M      G +   +E+ ++
Sbjct: 437 IMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEE 496

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   GI+PD   ++ L  GY + G+ + A  +   M   G +P ++ +  +I G C   +
Sbjct: 497 MKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEE 556

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
              A  + ++M   GI PN  TY +L+ G G
Sbjct: 557 GDHAEQLLKEMISKGITPNDNTYLSLIEGIG 587



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 205/413 (49%), Gaps = 7/413 (1%)

Query: 28  TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIF 87
           T + Y  L+ A    KR          ++  G+ P     N M++   +S   ++A  ++
Sbjct: 120 TYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLY 179

Query: 88  QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
            +M     K +  T+N +I      GK +++ + + LM +   +KPN  TYN ++  +CS
Sbjct: 180 AEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLM-EALGIKPNVVTYNTIIHGYCS 238

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
           +  +E A  +   M   G++PD+ TY +      + G+   A  ML +M+   +RP   T
Sbjct: 239 RGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVT 298

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG-FLDIK--DSDGVDKALT 264
              ++ GYC +GN+E A  +  +M    + P +  +N LI   FLD K  ++DG+ K   
Sbjct: 299 YNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKE-- 356

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M E G+ PD VT++ +++ +   G + K   + D+M+  GI+P    ++ L     + G
Sbjct: 357 -MSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRG 415

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
             ++A+ +   + + G+ P+++MF  +I G C    M RA ++ ++M ++ + P+  T+ 
Sbjct: 416 RMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFN 475

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           TL+ G     +   A EL++ M+ +G++P   +   +   +   G  ++A RV
Sbjct: 476 TLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRV 528



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 193/397 (48%), Gaps = 7/397 (1%)

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           +L++ +I AC E    D+A + F  MK  G  P     N ++  +    + E++  L   
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M + + +K +  T+NI++   C +  +++A   +  M A GI+P+ VTYNT+   Y   G
Sbjct: 182 MFRMR-IKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRG 240

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
               A  +   M+   V+P+  T G  +SG CKEG +E+A   L +MKE+ + P  V +N
Sbjct: 241 RVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYN 300

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +LI G+ +  + +        M   G+ P V T++ ++ A      M +   I  +M + 
Sbjct: 301 TLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEK 360

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+ PD   ++IL  GY R G  +KA ++   M   G+ P  V +T++I       +M++A
Sbjct: 361 GLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQA 420

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             ++EK+   GI P+L  +  L+ G+       RA  +L+ M++  V P + T   +   
Sbjct: 421 DDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQ- 479

Query: 425 WRAIGLAREAK-RVLKSAEEDRQSMPNKKDEIAVESI 460
               G  RE K    +   E+ +S   K D I+  ++
Sbjct: 480 ----GRCREGKVEAARELIEEMKSRGIKPDHISYNTL 512


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 217/415 (52%), Gaps = 1/415 (0%)

Query: 9    KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
            K  EA  + + ++ +G +P L+TY  +V  L ++       +L++K+E+  ++P  +++N
Sbjct: 815  KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 874

Query: 69   AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
             +I+   +  ++D+A+ +F++M+  G +P   TY++LI    N G+  ++ +LL  M + 
Sbjct: 875  TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 934

Query: 129  KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
            K + P+  T++ L+ A+  +  + EA  +  +MV   I P  VTY++L   +  +     
Sbjct: 935  K-INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 993

Query: 189  AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
            A+QM   M +    P+  T   ++ G+CK   +E+ M     M +  +  N V +N LI+
Sbjct: 994  AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 1053

Query: 249  GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
            G     D D   +    M   GV P+++T++T++D     G + K   +F+ + ++ +EP
Sbjct: 1054 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 1113

Query: 309  DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
             I+ ++I+ +G  +AG+ +    +  ++   GV P+VV + T+ISG+C     + A +++
Sbjct: 1114 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 1173

Query: 369  EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
            ++M E G  PN   Y TL+           + EL++ M   G     STI LV +
Sbjct: 1174 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 1228



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/463 (25%), Positives = 220/463 (47%), Gaps = 23/463 (4%)

Query: 8    GKPHEAHYIFNCLI--------------------EEGHRPTLITYTTLVAALTRQKRFKS 47
            G PH  HY ++ LI                    + G+ P ++T ++L+      KR   
Sbjct: 725  GIPHN-HYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 783

Query: 48   ILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIK 107
             ++L+ ++   G +P+++ FN +I+         EAM +  +M   GC+P   TY  ++ 
Sbjct: 784  AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 843

Query: 108  GYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ 167
            G    G  + +  LL  M Q K ++P    YN ++   C    +++A N+  +M   GI+
Sbjct: 844  GLCKRGDTDLAFNLLNKMEQGK-LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 902

Query: 168  PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
            P+ VTY++L      YG    A ++L +M   ++ P+  T   ++  + KEG + +A + 
Sbjct: 903  PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 962

Query: 228  LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
               M +  + P++V ++SLI GF      D   +    M      PDVVT++T++  +  
Sbjct: 963  YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 1022

Query: 288  AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
               + +  E+F +M + G+  +   ++IL +G  +AG+   A+ I   M   GV PN++ 
Sbjct: 1023 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 1082

Query: 348  FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
            + T++ G C   K+++AM ++E +    + P + TY  ++ G  +A +     +L   + 
Sbjct: 1083 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 1142

Query: 408  EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
             KGV+P       +   +   G   EA  + K  +ED  ++PN
Sbjct: 1143 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED-GTLPN 1184



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 212/427 (49%), Gaps = 6/427 (1%)

Query: 9    KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
            K  +A  +F  +++    P++I ++ L++A+ +  +F  ++SL  +++  G+  +   ++
Sbjct: 675  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 734

Query: 69   AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
             +IN       +  A+ +  KM   G +P   T ++L+ GY +  +  E++ L+  M   
Sbjct: 735  ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV- 793

Query: 129  KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
               +PN  T+N L+      N   EA  ++ +MVA G QPD VTY  +     + G+T  
Sbjct: 794  TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 853

Query: 189  AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
            A  +L +M+  ++ P       I+ G CK  +M+DA+     M+   + PN+V ++SLI 
Sbjct: 854  AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 913

Query: 249  GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
               +        + L+ M E  + PDV TFS ++DA+   G + + ++++D+MVK  I+P
Sbjct: 914  CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 973

Query: 309  DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
             I  +S L  G+       +A+ +   M      P+VV + T+I G+C   +++  M ++
Sbjct: 974  SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 1033

Query: 369  EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
             +M + G+  N  TY  L+ G  +A     A+E+ + M   GV P   T   + D     
Sbjct: 1034 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD----- 1088

Query: 429  GLAREAK 435
            GL +  K
Sbjct: 1089 GLCKNGK 1095



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 190/395 (48%), Gaps = 1/395 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G R  L T+  ++       +    LS++ K+ K G +PD +   +++N       V +A
Sbjct: 218 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 277

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +  KM + G KP    YN +I       +  ++    + + + K ++PN  TY  LV 
Sbjct: 278 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER-KGIRPNVVTYTALVN 336

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C+ +   +A  ++  M+   I P+ +TY+ L  A+ + G+   A+++  EM    + P
Sbjct: 337 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 396

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   +++G C    +++A +    M       ++V +N+LI GF   K  +   K  
Sbjct: 397 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 456

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M + G+  + VT++T++  +  AG + K QE F  M   GI PDI  ++IL  G    
Sbjct: 457 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 516

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           GE +KA  I   M+K  +  ++V +TTVI G C   K++ A S++  +   G+ P++ TY
Sbjct: 517 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 576

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            T++ G          E L   M+++G+     T+
Sbjct: 577 TTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 611



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 98/427 (22%), Positives = 212/427 (49%), Gaps = 1/427 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K ++A  +F+ +++    P+++ +  L++A+ + K++  ++SL  K+E  G++ D   FN
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +IN       V  A+ I  KM   G +P   T  +L+ G+    +  +++ L+  M + 
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE- 286

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
              KP+   YN ++ + C    + +A++   ++   GI+P+ VTY  L            
Sbjct: 287 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 346

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A ++L +M   ++ PN  T   ++  + K G + +A      M  + + P++V ++SLI 
Sbjct: 347 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 406

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G       D  ++   LM   G   DVV+++T+++ +  A  +    ++F +M + G+  
Sbjct: 407 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 466

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           +   ++ L +G+ +AG+  KA+   + M  +G+ P++  +  ++ G C+  ++++A+ I+
Sbjct: 467 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 526

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           E M +  ++ ++ TY T++ G  +  +   A  L   +  KG++P   T   +       
Sbjct: 527 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 586

Query: 429 GLAREAK 435
           GL  E +
Sbjct: 587 GLLHEVE 593



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 182/379 (48%), Gaps = 36/379 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    + +  +A  + + ++E G++P ++ Y  ++ +L + KR         ++E+ G+
Sbjct: 265 VNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI 324

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ + + A++N    S    +A ++   M      P   TY+ L+  +   GK  E+ +
Sbjct: 325 RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 384

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M +  ++ P+  TY+ L+   C  + I+EA  +   MV+ G   D V+YNTL    
Sbjct: 385 LFEEMVR-MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL---- 439

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                                          ++G+CK   +ED M+    M +  +  N 
Sbjct: 440 -------------------------------INGFCKAKRVEDGMKLFREMSQRGLVSNT 468

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+LI+GF    D D   +  + M+ FG+ PD+ T++ ++      G + K   IF+D
Sbjct: 469 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 528

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M K  ++ DI  ++ + +G  + G+ ++A S+  S+   G+ P++V +TT++SG C    
Sbjct: 529 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 588

Query: 361 MQRAMSIYEKMCEIGINPN 379
           +    ++Y KM + G+  N
Sbjct: 589 LHEVEALYTKMKQEGLMKN 607



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 109/465 (23%), Positives = 202/465 (43%), Gaps = 53/465 (11%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L    +  EA+ +F+ ++ +G    +++Y TL+    + KR +  + L  ++ + G+
Sbjct: 405 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 464

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             +++ +N +I    ++G+VD+A + F +M   G  P   TYN L+ G  + G+ E++L 
Sbjct: 465 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 524

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M Q + +  +  TY  ++R  C    +EEAW++   +   G++PD VTY T+    
Sbjct: 525 IFEDM-QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 583

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERT------------------CGI-------IVSGY 215
              G  +  E +  +M+   +  N+ T                  CG        I SG 
Sbjct: 584 CTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGV 643

Query: 216 CK---------------------------EGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           CK                           E  ++DA+     M +    P+++ F+ L+ 
Sbjct: 644 CKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLS 703

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
               +   D V      M+  G+  +  T+S +++ +     +     +   M+K G EP
Sbjct: 704 AIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEP 763

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           +I   S L  GY  +    +A +++  M   G  PN V F T+I G     K   AM++ 
Sbjct: 764 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALI 823

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           ++M   G  P+L TY  ++ G  +      A  LL  ME+  + P
Sbjct: 824 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEP 868



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 179/372 (48%), Gaps = 7/372 (1%)

Query: 41  RQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS 100
           R  +    + L S + K    P  + FN +++A  +    D  + + +KM+  G +    
Sbjct: 165 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 224

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
           T+N +I  +    +   +L +L  M +    +P+  T   LV  +C +N + +A ++V K
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLK-LGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 283

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           MV  G +PD V YN +  +  +      A     E++   +RPN  T   +V+G C    
Sbjct: 284 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 343

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE---FGVKPDVVT 277
             DA R L  M + ++ PN++ +++L+  F+    +  V +A  L EE     + PD+VT
Sbjct: 344 WSDAARLLSDMIKKKITPNVITYSALLDAFV---KNGKVLEAKELFEEMVRMSIDPDIVT 400

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           +S++++       + +  ++FD MV  G   D+  ++ L  G+ +A   +    +   M 
Sbjct: 401 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 460

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
           + G+  N V + T+I G+  A  + +A   + +M   GI+P++ TY  LL G  +  +  
Sbjct: 461 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 520

Query: 398 RAEELLQVMEEK 409
           +A  + + M+++
Sbjct: 521 KALVIFEDMQKR 532



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/475 (23%), Positives = 199/475 (41%), Gaps = 61/475 (12%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L    +  +A  + + +I++   P +ITY+ L+ A  +  +      L  ++ +  +
Sbjct: 335 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 394

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + ++++IN       +DEA ++F  M   GC     +YNTLI G+    + E+ +K
Sbjct: 395 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 454

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + MSQ + +  N  TYN L++ +     +++A     +M   GI PD  TYN L    
Sbjct: 455 LFREMSQ-RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 513

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              GE  +A  +  +MQ  ++  +  T   ++ G CK G +E+A      +    + P++
Sbjct: 514 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 573

Query: 241 VVFNSLIKGFL-----------------------DIKDSDG------------------- 258
           V + +++ G                         D   SDG                   
Sbjct: 574 VTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAP 633

Query: 259 ----------VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL----MGKCQEIFDDMVKA 304
                       KAL+L+  F  K    T     +  S  GL    +     +F +MVK+
Sbjct: 634 SLLKDIKSGVCKKALSLLRAFSGK----TSYDYREKLSRNGLSELKLDDAVALFGEMVKS 689

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
              P I  FS L     +  +     S+   M+  G+  N   ++ +I+ +C   ++  A
Sbjct: 690 RPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLA 749

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           +++  KM ++G  PN+ T  +LL GY  +K+   A  L+  M   G +P   T  
Sbjct: 750 LAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFN 804



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 150/309 (48%), Gaps = 1/309 (0%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            ++ L   G+  +A  + + +IE    P + T++ L+ A  ++ +      L  ++ K  +
Sbjct: 912  ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 971

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             P  + ++++IN       +DEA ++F+ M    C P   TYNTLIKG+    + EE ++
Sbjct: 972  DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 1031

Query: 121  LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            + + MSQ + +  N  TYNIL++        + A  +  +MV+ G+ P+ +TYNTL    
Sbjct: 1032 VFREMSQ-RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 1090

Query: 181  AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
             + G+  +A  +   +Q +++ P   T  I++ G CK G +ED       +    V P++
Sbjct: 1091 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 1150

Query: 241  VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            V +N++I GF      +  D     M+E G  P+   ++T++ A    G      E+  +
Sbjct: 1151 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 1210

Query: 301  MVKAGIEPD 309
            M   G   D
Sbjct: 1211 MRSCGFAGD 1219


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 219/458 (47%), Gaps = 14/458 (3%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  PT++TY T++  L +     + + L  ++ + G  PD + +N +I++  ++G+++E
Sbjct: 31  DGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEE 90

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK-NVKPNDRTYNIL 141
           A ++   M   GC P   TY+ LI G   VG+ +E+ +L+Q M++   +V PN  TYN  
Sbjct: 91  ARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSF 150

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQ--PDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           +   C ++   EA  ++  +    ++  PD VT++TL     + G+   A  +  +M   
Sbjct: 151 LDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAG 210

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              PN  T   +V+G CK   ME A   +  M +  V P+++ ++ L+  F     +  V
Sbjct: 211 GYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFC---KASRV 267

Query: 260 DKALTLMEEFGVK--------PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
           D+AL L+     +        PD VTF+ ++     AG   +   +F++MV   ++PD+ 
Sbjct: 268 DEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVM 327

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            F  L  G  +AG+ + A  IL  M   GV PNVV +  ++ G C + +++ A    E+M
Sbjct: 328 TFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEM 387

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
              G  P+  TY +L++    A +   A +L+  ++  G  P   T  ++ D     G  
Sbjct: 388 VSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKT 447

Query: 432 REAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSAS 469
            +A  VL+          +         +HR  NL+ +
Sbjct: 448 EQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGT 485



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 117/471 (24%), Positives = 207/471 (43%), Gaps = 45/471 (9%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  L+E GH P ++TY TL+ +L +    +    L   +   G  P+ + ++ +IN   
Sbjct: 59  LFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLC 118

Query: 76  ESGNVDEAMKIFQKMKDSGC---------------------------------------K 96
           + G +DEA ++ Q+M    C                                        
Sbjct: 119 KVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVS 178

Query: 97  PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWN 156
           P T T++TLI G    G+ +E+  +   M     V PN  TYN LV   C  + +E A  
Sbjct: 179 PDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYV-PNVITYNALVNGLCKADKMERAHA 237

Query: 157 VVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN-----NQVRPNERTCGII 211
           ++  MV  G+ PD +TY+ L  A+ +      A ++L  M +     N + P++ T  I+
Sbjct: 238 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNIL 297

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           ++G CK GN E A      M    + P+++ F +LI G       +     L LM   GV
Sbjct: 298 IAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGV 357

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            P+VVT++ ++     +G + +  +  ++MV +G  PD   +  L     RA     A  
Sbjct: 358 PPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQ 417

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +++ ++ +G  P+ V +  ++ G   + K ++A+++ E+M   G  P+  T+     G  
Sbjct: 418 LVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLH 477

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
            +       ELL+V+  KG+ P  +T   + D     G   + K ++K  E
Sbjct: 478 RSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 199/399 (49%), Gaps = 17/399 (4%)

Query: 32  YTTLVAALTRQKRFKSILSLI-SKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           Y  ++ +L R       L +   ++ +DG+ P  + +N +IN   +S ++   M++F+++
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
            + G  P   TYNTLI      G  EE+ +L   MS  +   PN  TY++L+   C    
Sbjct: 64  VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSS-RGCVPNVVTYSVLINGLCKVGR 122

Query: 151 IEEAWNVVYKMV--ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR--PNER 206
           I+EA  ++ +M   +  + P+ +TYN+      +   T  A +++  +++  +R  P+  
Sbjct: 123 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTV 182

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   ++ G CK G +++A      M      PN++ +N+L+ G      +D +++A  ++
Sbjct: 183 TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLC---KADKMERAHAMI 239

Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV-----FSILAK 318
           E     GV PDV+T+S ++DA+  A  + +  E+   M   G  P++ V     F+IL  
Sbjct: 240 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIA 299

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           G  +AG  ++A ++   M    + P+V+ F  +I G C A +++ A  I + M  +G+ P
Sbjct: 300 GACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPP 359

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           N+ TY  L+ G  ++ +   A + L+ M   G  P   T
Sbjct: 360 NVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSIT 398



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 164/351 (46%), Gaps = 15/351 (4%)

Query: 100 STYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVY 159
           + YN +++     G    +L++ +       V P   TYN ++   C  N +     +  
Sbjct: 2   ADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFE 61

Query: 160 KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEG 219
           ++V  G  PD VTYNTL  +  + G+   A ++  +M +    PN  T  ++++G CK G
Sbjct: 62  ELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVG 121

Query: 220 NMEDAMRFLYRM--KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME-----EFGVK 272
            +++A   +  M  K  +V PN++ +NS + G           +A  LM         V 
Sbjct: 122 RIDEARELIQEMTRKSCDVLPNIITYNSFLDGLC---KQSMTAEACELMRSLRDGSLRVS 178

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           PD VTFST++D     G + +   +FDDM+  G  P++  ++ L  G  +A + ++A ++
Sbjct: 179 PDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAM 238

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK-----TYETLL 387
           + SM   GV P+V+ ++ ++  +C A ++  A+ +   M   G  PN+      T+  L+
Sbjct: 239 IESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILI 298

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            G  +A    +A  L + M  K ++P   T   + D     G    A+ +L
Sbjct: 299 AGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL 349



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 138/288 (47%), Gaps = 6/288 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG- 59
           +N L    K   AH +   ++++G  P +ITY+ LV A  +  R    L L+  +   G 
Sbjct: 223 VNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGC 282

Query: 60  ----MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKP 115
               + PD + FN +I    ++GN ++A  +F++M     +P   T+  LI G    G+ 
Sbjct: 283 TPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQV 342

Query: 116 EESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
           E +  +L LM  +  V PN  TYN LV   C    IEEA   + +MV+SG  PD++TY +
Sbjct: 343 EAARDILDLMG-NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGS 401

Query: 176 LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
           L  A  +   T  A Q++ E+++    P+  T  I+V G  K G  E A+  L  M    
Sbjct: 402 LVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKG 461

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD 283
             P+   F +   G     +  G  + L ++   G+ PD  T S+I+D
Sbjct: 462 HQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 509



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 1/150 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  EA      ++  G  P  ITY +LV AL R  R    L L+S+++  G  PD
Sbjct: 371 LCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPD 430

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ +N +++   +SG  ++A+ + ++M   G +P + T+     G    G    +++LL+
Sbjct: 431 TVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLR 490

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
           ++   K + P+  T + ++   C    +++
Sbjct: 491 VVLA-KGMLPDATTCSSILDWVCRSGKLDD 519


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 213/458 (46%), Gaps = 33/458 (7%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQ--------------KRFKSILSLISK 54
           K  EA+  FN +I+ G  P +I +TTL+    +               KRF+  + L + 
Sbjct: 22  KMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALKRFRPDVFLYTS 81

Query: 55  VEKDGMKP-----------------DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKP 97
           V     K                  D I +  +I   ++S  +DEA ++F+++K +GC P
Sbjct: 82  VIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSP 141

Query: 98  TTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
               Y  +I G    G+ E+ LK  + MS    V P   TY +++   C    + +A  V
Sbjct: 142 NVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCV-PTRTTYTVVIDGLCKAQMLPDACKV 200

Query: 158 VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
             +MV  G  PD +TY TL   +++  +   A ++L  M      P   T G IV G+CK
Sbjct: 201 FEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCK 260

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
              + +A   + +M+E    P L +F SL+  +L    ++   + LT M   G  PDV+ 
Sbjct: 261 LDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVIL 320

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           +++++D   S G + + + +FD M++ G  PD   +  + + + + G  + A  IL  M 
Sbjct: 321 YTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMA 380

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
           K GV P+   + +++ G+    ++ +A  +Y++M   GI PN  T+  L+ G  +  +  
Sbjct: 381 KSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTD 440

Query: 398 RAEELL-QVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           RA  L  +++E++ V P   +  ++ D     G   EA
Sbjct: 441 RAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEA 478



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 198/412 (48%), Gaps = 2/412 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT  TYT ++  L + +       +  ++ + G  PD+I +  +I+  S++  +DEA K+
Sbjct: 176 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 235

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
              M   G +PT  TY +++ G+  +    E+ +++  M +++  +P    +  L+  + 
Sbjct: 236 LDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQM-RERGCEPGLFIFTSLLSYYL 294

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           SK   EEA+ V+ +M A G  PD + Y +L       G    A  +   M      P+  
Sbjct: 295 SKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDAL 354

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T G I+  + K GN+E A   L  M +  V P+   +NSL+ G++ ++  D        M
Sbjct: 355 TYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRM 414

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV-KAGIEPDIHVFSILAKGYVRAGE 325
              G+KP+ VTF+ +M      G   +   +F +M+ K  + P +  ++IL  G  +AG 
Sbjct: 415 VASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGR 474

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A      M   G+ P    +T++I     A ++  A  + E M ++G+NP+++ Y  
Sbjct: 475 VSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSA 534

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           L+ G  ++     A ++ Q M ++G  P + T +++   +RA G A + + V
Sbjct: 535 LITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAV 586



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 201/398 (50%), Gaps = 10/398 (2%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F  ++++G  P  ITYTTL+   ++  +      L+  +   G +P ++ + +++
Sbjct: 196 DACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIV 255

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   +   ++EA ++  +M++ GC+P    + +L+  Y + G+ EE+ ++L  M+  +  
Sbjct: 256 HGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTA-RGC 314

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+   Y  L+    S   + EA +V   M+  G  PDA+TY T+ + +++ G    A +
Sbjct: 315 APDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGE 374

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L  M  + V P+      ++ GY K   ++ A     RM    + PN V FN L+ G  
Sbjct: 375 ILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLF 434

Query: 252 DIKDSDG-VDKALTLMEEF----GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
                DG  D+A +L +E      V P +V+++ ++D    AG + +    F +M+  GI
Sbjct: 435 ----KDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGI 490

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+ H ++ L     +AG   +A+ ++  M K GV+P+V  ++ +I+G  ++  +  A  
Sbjct: 491 IPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWD 550

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
           ++++M + G  PN  TY+ L  G+  A +    E + Q
Sbjct: 551 VFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQ 588



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 171/387 (44%), Gaps = 34/387 (8%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G +P  + +N +I+  +    +DEA K F  M D+GC+P    + TLI G+   G+P+  
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS---------------------------- 150
            KLL      K  +P+   Y  ++  +C                                
Sbjct: 62  HKLLN--QALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLA 119

Query: 151 ----IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               I+EA  +  ++  +G  P+ V Y  +     + G      +   EM  +   P   
Sbjct: 120 DSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRT 179

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T  +++ G CK   + DA +   +M +    P+ + + +LI GF      D   K L +M
Sbjct: 180 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 239

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              G +P  VT+ +I+  +    ++ + +E+   M + G EP + +F+ L   Y+  G  
Sbjct: 240 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRA 299

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           ++A  +LT M   G  P+V+++T++I    +  ++  A  +++ M E G  P+  TY T+
Sbjct: 300 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 359

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRP 413
           +  + +      A E+L++M + GV P
Sbjct: 360 IQNFSKIGNVEAAGEILELMAKSGVGP 386



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 148/310 (47%), Gaps = 10/310 (3%)

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +P   +YN ++    S + ++EA+     M+ +G +PD + + TL   + + G+     +
Sbjct: 4   EPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHK 63

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L +    + RP+      ++ GYCK G+++      +R    +   +++ + ++IKG  
Sbjct: 64  LLNQALK-RFRPDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISYTTVIKG-- 117

Query: 252 DIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
            + DS  +D+A  L EE    G  P+VV ++ ++D    AG +    + F++M  +   P
Sbjct: 118 -LADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVP 176

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
               ++++  G  +A     A  +   M + G  P+ + +TT+I G+  A KM  A  + 
Sbjct: 177 TRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 236

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           + M   G  P   TY +++ G+ +      A+E++  M E+G  P       +   + + 
Sbjct: 237 DVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSK 296

Query: 429 GLAREAKRVL 438
           G A EA +VL
Sbjct: 297 GRAEEAYQVL 306



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 124/250 (49%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L   G+  EA ++F+ +IE+G  P  +TY T++   ++    ++   ++  + K G+
Sbjct: 325 IDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGV 384

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +N++++   +   VD+A  ++ +M  SG KP   T+N L+ G    GK + +  
Sbjct: 385 GPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFS 444

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M + + V P   +Y IL+        + EA+    +M+  GI P+  TY +L  + 
Sbjct: 445 LFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSL 504

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+ G    A++++ +M    V P+ +    +++G      ++ A      M +    PN 
Sbjct: 505 AKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNE 564

Query: 241 VVFNSLIKGF 250
           V +  L +GF
Sbjct: 565 VTYKVLRRGF 574



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 137/293 (46%), Gaps = 8/293 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++  + KG+  EA+ +   +   G  P +I YT+L+  L    R      +   + + G 
Sbjct: 290 LSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGC 349

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD++ +  +I   S+ GNV+ A +I + M  SG  P    YN+L+ GY  + + +++  
Sbjct: 350 APDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFG 409

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV-ASGIQPDAVTYNTLARA 179
           +   M     +KPN  T+N+L+         + A+++  +M+    + P  V+Y  L   
Sbjct: 410 VYDRMVA-SGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDG 468

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G    A     EM +  + P   T   ++    K G + +A + +  M +L V+P+
Sbjct: 469 LGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPD 528

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAG 289
           +  +++LI G +   DS  VD A  + +E    G  P+ VT+  +   + +AG
Sbjct: 529 VQAYSALITGLI---DSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 578



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 130/280 (46%), Gaps = 6/280 (2%)

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           G +P  V+YNT+    A   +   A +    M +N   P+      ++ G+CK G  +  
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD-GVDKALTLMEEFGVKPDVVTFSTIMD 283
            + L +  +    P++ ++ S+I G+    D D G  +A+T         DV++++T++ 
Sbjct: 62  HKLLNQALK-RFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASL----DVISYTTVIK 116

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
             + +  + +  E+F+++  AG  P++  ++ +  G ++AG  +        M      P
Sbjct: 117 GLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVP 176

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
               +T VI G C A  +  A  ++E+M + G  P+  TY TL+ G+ +A +   A +LL
Sbjct: 177 TRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 236

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            VM  KG  P   T   +   +  + +  EAK V+    E
Sbjct: 237 DVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRE 276



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 59/120 (49%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA   F  +I+ G  P   TYT+L+ +L +  R      L+  + K G+ PD   +
Sbjct: 473 GRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAY 532

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +A+I    +S  VD A  +FQ+M   GC P   TY  L +G+   G+  +   + Q  SQ
Sbjct: 533 SALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQ 592


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 205/421 (48%), Gaps = 6/421 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+   A  + + L++ G      +   L+ AL R + FK + +L++++++  ++P+
Sbjct: 280 LCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPN 339

Query: 64  SILFNAMINACSESGNVDEAMKIFQKM---KDSG--CKPTTSTYNTLIKGYGNVGKPEES 118
            + F  +IN   +   VDEA+++F+KM   + +G   +P   TYNTLI G   VG+ EE 
Sbjct: 340 VVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEG 399

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           L L++ M       PN  TYN L+  +C  + IE A  +  +M   G+ P+ VT NTL  
Sbjct: 400 LGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVD 459

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
              ++G    A +   EMQ   ++ N  T   ++  +C   N+E AM     M E    P
Sbjct: 460 GMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSP 519

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           + +V+ +LI G       D     L+ M+E G  PD+V+F+ +++ +     + +  E+ 
Sbjct: 520 DAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEML 579

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
            +M  AGI+PD   ++ L   + + G+   A  ++  M K G+ P VV +  +I  +C  
Sbjct: 580 KEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLN 639

Query: 359 VKMQRAMSIYEKMCEIG-INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             +  AM I+  M     + PN   Y  L+       Q   A  L+  M+ KGV+P  +T
Sbjct: 640 GNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNT 699

Query: 418 I 418
            
Sbjct: 700 F 700



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/496 (25%), Positives = 238/496 (47%), Gaps = 18/496 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHR--PTLITYTTLVAALTRQKRF------KSILSLI 52
           +++L  KG+  +A ++ + +++      P   T   + +AL+++ +       + I+ L+
Sbjct: 199 IDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLV 258

Query: 53  SKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNV 112
           SK  +  + P+SI    +I+    SG  D A  +   +   G     ++ N L+   G  
Sbjct: 259 SKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRA 318

Query: 113 GKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG-----IQ 167
            + +    LL  M ++ +++PN  T+ IL+   C    ++EA  V  KM         ++
Sbjct: 319 REFKRMNTLLAEM-KEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVE 377

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNN-QVRPNERTCGIIVSGYCKEGNMEDAMR 226
           PD +TYNTL     + G       ++  M++  +  PN  T   ++ GYCK   +E A  
Sbjct: 378 PDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARE 437

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
              +M +  V PN+V  N+L+ G       +G  +    M+  G+K + VT++ ++ A+ 
Sbjct: 438 LFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFC 497

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
           +   + K  E+FD+M++AG  PD  V+  L  G  +AG+  +A  +L+ M++ G  P++V
Sbjct: 498 NVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIV 557

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            F  +I+G+C   K+  A  + ++M   GI P+  TY TL+  + +      A  L++ M
Sbjct: 558 SFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKM 617

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKD-EIAVESIHRKQ- 464
            ++G+ P   T   +  ++   G   EA ++ +      +  PN     I + S+ RK  
Sbjct: 618 VKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQ 677

Query: 465 -NLSASNSTFLQIPGV 479
            +L+ S    +++ GV
Sbjct: 678 VDLALSLMDDMKVKGV 693



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 106/204 (51%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK   A ++ + + E G  P ++++  L+    R+ +      ++ ++E  G+KPD + +
Sbjct: 535 GKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTY 594

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I+  S++G+   A ++ +KM   G  PT  TY  LI  Y   G  +E++K+ + MS 
Sbjct: 595 NTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSS 654

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              V PN   YNIL+ + C KN ++ A +++  M   G++P+  T+N + +   +     
Sbjct: 655 TSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLS 714

Query: 188 RAEQMLFEMQNNQVRPNERTCGII 211
           +A +++  M  +   P+  T  I+
Sbjct: 715 KAFELMDRMTEHACNPDYITMEIL 738



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 43/88 (48%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P  + Y  L+ +L R+ +    LSL+  ++  G+KP++  FNAM     E   + +A ++
Sbjct: 660 PNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFEL 719

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGK 114
             +M +  C P   T   L +    VG+
Sbjct: 720 MDRMTEHACNPDYITMEILTEWLSAVGE 747


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 207/404 (51%), Gaps = 6/404 (1%)

Query: 12  EAHYIFNCLIEEG--HRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNA 69
           +A   FN ++++G   RP +  + +L+ +L R   F+      +++ K+ +K D   F  
Sbjct: 111 KALIFFNEMVDKGLVFRPNI--FNSLLGSLVRSNCFEKAWLFFNEL-KERVKFDVYSFGI 167

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK 129
           MI  C E+GN+D++ ++   ++D G  P    Y TLI G    G  E +      M +  
Sbjct: 168 MIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGE-M 226

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
            +  N  T+ +L+     K   ++ +++  KM  +G+ P+  TYN L   Y   G+  RA
Sbjct: 227 GLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRA 286

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
             +  EM+   V  N  T   ++ G C+E  + +A + + +MK+  V PNL+ +N+LI G
Sbjct: 287 FDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGG 346

Query: 250 FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
           F D+ + D     L  ++  G+ P +VT++ +++ +S AG      ++  +M   GI P 
Sbjct: 347 FCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPS 406

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
               ++L   YVR  E +KA  I +SM K+G+ P+V ++  +I G C    M+ +  ++ 
Sbjct: 407 KVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFR 466

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            M E+ + P+   Y T++ GY +    +RA  LL+ ME KG+ P
Sbjct: 467 SMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVP 510



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 207/413 (50%), Gaps = 1/413 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           E  ++F   ++E  +  + ++  ++              L+  ++  G+ P+ +++  +I
Sbjct: 145 EKAWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLI 204

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           + C ++G+++ A   F KM + G      T+  LI G    G  ++   L + M  +  +
Sbjct: 205 DGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKIN-GL 263

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PN  TYN L+  +C +  I  A+++  +M   G++ + VTYNTL     +    + AE+
Sbjct: 264 FPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEK 323

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           ++ +M+   V PN  T   ++ G+C  GN++ A   L ++K   + P+LV +N LI+G+ 
Sbjct: 324 LVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYS 383

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
              +  GV      ME  G+ P  VT + ++DA+     M K  +I+  M K G+ PD++
Sbjct: 384 KAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVY 443

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
           V+ +L  G    G  +++  +  SM +  V P+ V++ T+I G+C      RA+ +  +M
Sbjct: 444 VYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREM 503

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
              G+ PN+ +Y +++    +  +   AE LL  M E  ++P  S + +++ +
Sbjct: 504 EAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMISKA 556



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/372 (25%), Positives = 178/372 (47%), Gaps = 1/372 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   ++  +   L + G  P ++ YTTL+    +    +       K+ + G+  +   F
Sbjct: 176 GNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTF 235

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +IN   + G   +   +F+KMK +G  P   TYN L+  Y   GK   +  L   M +
Sbjct: 236 TVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEM-R 294

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           ++ V+ N  TYN L+   C +  + EA  +V +M  + + P+ +TYNTL   +   G   
Sbjct: 295 ERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLD 354

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A  +L ++++N + P+  T  I++ GY K GN +        M+   + P+ V    LI
Sbjct: 355 KASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLI 414

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             ++ +++ +   +  + ME+FG+ PDV  +  ++      G M +  ++F  M +  +E
Sbjct: 415 DAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVE 474

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P   +++ +  GY +     +A  +L  M   G+ PNV  ++++I   C   K + A  +
Sbjct: 475 PSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVL 534

Query: 368 YEKMCEIGINPN 379
            +KM E+ + P+
Sbjct: 535 LDKMIELQLKPS 546



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 104/456 (22%), Positives = 210/456 (46%), Gaps = 60/456 (13%)

Query: 10  PHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP------- 62
           P +A  +FN  I++G + T  + + L+  L    +     SLI ++  + +         
Sbjct: 18  PLQALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPS 77

Query: 63  --------------DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
                          ++L+ ++INA  +S  +D+A+  F +M D G     + +N+L+  
Sbjct: 78  LLHHLTQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGS 137

Query: 109 YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP 168
                                           LVR+ C     E+AW + +  +   ++ 
Sbjct: 138 --------------------------------LVRSNC----FEKAW-LFFNELKERVKF 160

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           D  ++  + +   + G   ++ Q+L  +Q+  + PN      ++ G CK G++E A  F 
Sbjct: 161 DVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFF 220

Query: 229 YRMKELEVHPNLVVFNSLIKG-FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
            +M E+ +  N   F  LI G F      DG D     M+  G+ P++ T++ +M+ +  
Sbjct: 221 DKMGEMGLVANQYTFTVLINGLFKKGLKKDGFD-LFEKMKINGLFPNLYTYNCLMNEYCG 279

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
            G + +  ++FD+M + G+E ++  ++ L  G  R     +AE ++  M+K  V PN++ 
Sbjct: 280 EGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLIT 339

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           + T+I G+C+   + +A S+ +++   G++P+L TY  L+ GY +A       +L + ME
Sbjct: 340 YNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREME 399

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            +G+ P K T  ++ D++  +    +A ++  S E+
Sbjct: 400 GRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEK 435



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 157/319 (49%), Gaps = 1/319 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  KG   +   +F  +   G  P L TY  L+     + +      L  ++ + G+
Sbjct: 239 INGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGV 298

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + + + +N +I        V EA K+  +MK +   P   TYNTLI G+ +VG  +++  
Sbjct: 299 EANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASS 358

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  +  +  + P+  TYNIL+  +    + +   ++  +M   GI P  VT   L  AY
Sbjct: 359 LLDQLKSN-GLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAY 417

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  E  +A Q+   M+   + P+    G+++ G C +GNM+++ +    M E+ V P+ 
Sbjct: 418 VRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSD 477

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V++N++I G+    +S    + L  ME  G+ P+V ++S+I+      G   + + + D 
Sbjct: 478 VIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDK 537

Query: 301 MVKAGIEPDIHVFSILAKG 319
           M++  ++P   + ++++K 
Sbjct: 538 MIELQLKPSASILNMISKA 556


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 213/431 (49%), Gaps = 2/431 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G+ P ++T ++L+      KR    ++L+ ++   G +P+++ FN +I+       
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             EAM +  +M   GC+P   TY  ++ G    G  + +  LL  M Q K ++P    YN
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK-LEPGVLIYN 260

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++   C    +++A N+  +M   GI+P+ VTY++L      YG    A ++L +M   
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           ++ P+  T   ++  + KEG + +A +    M +  + P++V ++SLI GF      D  
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            +    M      PDVVT++T++  +     + +  E+F +M + G+  +   ++IL +G
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             +AG+   A+ I   M   GV PN++ + T++ G C   K+++AM ++E +    + P 
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + TY  ++ G  +A +     +L   +  KGV+P       +   +   G   EA  + K
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560

Query: 440 SAEEDRQSMPN 450
             +ED  ++PN
Sbjct: 561 EMKED-GTLPN 570



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 217/415 (52%), Gaps = 1/415 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  + + ++ +G +P L+TY  +V  L ++       +L++K+E+  ++P  +++N
Sbjct: 201 KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 260

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I+   +  ++D+A+ +F++M+  G +P   TY++LI    N G+  ++ +LL  M + 
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K + P+  T++ L+ A+  +  + EA  +  +MV   I P  VTY++L   +  +     
Sbjct: 321 K-INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A+QM   M +    P+  T   ++ G+CK   +E+ M     M +  +  N V +N LI+
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G     D D   +    M   GV P+++T++T++D     G + K   +F+ + ++ +EP
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
            I+ ++I+ +G  +AG+ +    +  ++   GV P+VV + T+ISG+C     + A +++
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           ++M E G  PN   Y TL+           + EL++ M   G     STI LV +
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 212/427 (49%), Gaps = 6/427 (1%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  +A  +F  +++    P++I ++ L++A+ +  +F  ++SL  +++  G+  +   ++
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +IN       +  A+ +  KM   G +P   T ++L+ GY +  +  E++ L+  M   
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV- 179

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
              +PN  T+N L+      N   EA  ++ +MVA G QPD VTY  +     + G+T  
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  +L +M+  ++ P       I+ G CK  +M+DA+     M+   + PN+V ++SLI 
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
              +        + L+ M E  + PDV TFS ++DA+   G + + ++++D+MVK  I+P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
            I  +S L  G+       +A+ +   M      P+VV + T+I G+C   +++  M ++
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            +M + G+  N  TY  L+ G  +A     A+E+ + M   GV P   T   + D     
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD----- 474

Query: 429 GLAREAK 435
           GL +  K
Sbjct: 475 GLCKNGK 481



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 198/402 (49%), Gaps = 1/402 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  + + +   G++P  +T+ TL+  L    +    ++LI ++   G +PD + +  ++
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 228

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N   + G+ D A  +  KM+    +P    YNT+I G       +++L L + M + K +
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM-ETKGI 287

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +PN  TY+ L+   C+     +A  ++  M+   I PD  T++ L  A+ + G+   AE+
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  EM    + P+  T   +++G+C    +++A +    M      P++V +N+LIKGF 
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
             K  +   +    M + G+  + VT++ ++     AG     QEIF +MV  G+ P+I 
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++ L  G  + G+ +KA  +   +++  + P +  +  +I G C A K++    ++  +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
              G+ P++  Y T++ G+        A+ L + M+E G  P
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 150/309 (48%), Gaps = 1/309 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  +A  + + +IE    P + T++ L+ A  ++ +      L  ++ K  +
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + ++++IN       +DEA ++F+ M    C P   TYNTLIKG+    + EE ++
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + MSQ + +  N  TYNIL++        + A  +  +MV+ G+ P+ +TYNTL    
Sbjct: 418 VFREMSQ-RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+  +A  +   +Q +++ P   T  I++ G CK G +ED       +    V P++
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N++I GF      +  D     M+E G  P+   ++T++ A    G      E+  +
Sbjct: 537 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 596

Query: 301 MVKAGIEPD 309
           M   G   D
Sbjct: 597 MRSCGFAGD 605



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 87/196 (44%)

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
           E  ++DA+     M +    P+++ F+ L+     +   D V      M+  G+  +  T
Sbjct: 59  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           +S +++ +     +     +   M+K G EP+I   S L  GY  +    +A +++  M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
             G  PN V F T+I G     K   AM++ ++M   G  P+L TY  ++ G  +     
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 398 RAEELLQVMEEKGVRP 413
            A  LL  ME+  + P
Sbjct: 239 LAFNLLNKMEQGKLEP 254



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 5/191 (2%)

Query: 259 VDKALTLMEEFGVK----PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           +D A+ L  E  VK    P ++ FS ++ A +          + + M   GI  + + +S
Sbjct: 62  LDDAVALFGEM-VKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
           IL   + R  +   A ++L  M K G  PN+V  +++++G+C++ ++  A+++ ++M   
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G  PN  T+ TL+ G     +   A  L+  M  KG +P   T  +V +     G    A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 435 KRVLKSAEEDR 445
             +L   E+ +
Sbjct: 241 FNLLNKMEQGK 251


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 214/441 (48%), Gaps = 15/441 (3%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV KG+      ++  ++  G  P ++TY TL+    RQ  F     L  ++ +  + P 
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++  +I        + EA  +F+ M++SG  P   TYNT++ GY  +   +++L+L  
Sbjct: 228 VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYX 287

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D  + PN  T+ IL+   C  + +  A   +  M + G+ P+   YN L   Y + 
Sbjct: 288 EMLGD-GLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKA 346

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A  +  E++ +++ P+  T  I++ G C    ME+A   L  MK+    PN V +
Sbjct: 347 GNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTY 406

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+LI G+    + +   +  + M E G++P+++TFST++D +  AG M     ++ +MV 
Sbjct: 407 NTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI 466

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ PD+  ++ L  G+ + G  ++A  +   M++ G+HPNV   + +I G C   ++  
Sbjct: 467 KGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISD 526

Query: 364 AMSIY----------EKMCEIG---INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           A+ ++           K  E+     +PN   Y  L+ G     + ++A +    M   G
Sbjct: 527 AIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSG 586

Query: 411 VRPKKST-IQLVADSWRAIGL 430
           +RP   T I ++   +RA+ L
Sbjct: 587 LRPDVFTCIVIIQGHFRAMHL 607



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 185/363 (50%), Gaps = 1/363 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P +     ++  L ++ RF ++  +   +   G  P+ + +  +I+ C   G+  +A ++
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F +M +    PT   Y  LI+G     +  E+  + + M ++  + PN  TYN ++  +C
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM-RNSGMLPNLYTYNTMMDGYC 274

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               +++A  +  +M+  G+ P+ VT+  L     +  E   A + L +M +  V PN  
Sbjct: 275 KIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               ++ GYCK GN+ +A+     +++ E+ P++  ++ LIKG   +   +  D  L  M
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           ++ G  P+ VT++T++D +   G M K  E+   M + GIEP+I  FS L  GY +AG+ 
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           + A  + T M   G+ P+VV +T +I G       + A  ++++M E G++PN+ T   L
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514

Query: 387 LWG 389
           + G
Sbjct: 515 IDG 517



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 196/412 (47%), Gaps = 9/412 (2%)

Query: 35  LVAALTRQKRFK---SILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           L+  L + +R +   S+ +++S++E     P+  +F  +I A SE G V+EA+ ++ KM 
Sbjct: 96  LIQCLQKSRRSRICCSVFNVLSRLESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKMD 153

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
                P     N ++ G    G+ +   K+   M   +   PN  TY  L+   C +   
Sbjct: 154 ---VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVA-RGASPNVVTYGTLIDGCCRQGDF 209

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
            +A+ +  +M+   I P  V Y  L R          AE M   M+N+ + PN  T   +
Sbjct: 210 LKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTM 269

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           + GYCK  +++ A+     M    + PN+V F  LI G     +     K L  M  FGV
Sbjct: 270 MDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGV 329

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            P++  ++ ++D +  AG + +   +  ++ K  I PD+  +SIL KG       ++A+ 
Sbjct: 330 VPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADG 389

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +L  M+K G  PN V + T+I G+C    M++A+ +  +M E GI PN+ T+ TL+ GY 
Sbjct: 390 LLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC 449

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           +A +   A  L   M  KG+ P       + D     G  +EA R+ K  +E
Sbjct: 450 KAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 187/403 (46%), Gaps = 14/403 (3%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G+ +  EA  +F  +   G  P L TY T++    +    K  L L  ++  DG+ P+
Sbjct: 238 LCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPN 297

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + F  +I+   ++  +  A K    M   G  P    YN LI GY   G   E+L L  
Sbjct: 298 VVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHS 357

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            + + + + P+  TY+IL++  C  + +EEA  ++ +M   G  P+AVTYNTL   Y + 
Sbjct: 358 EIEKHE-ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKE 416

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G   +A ++  +M    + PN  T   ++ GYCK G ME AM     M    + P++V +
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY 476

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF----- 298
            +LI G     ++    +    M+E G+ P+V T S ++D     G +    ++F     
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTG 536

Query: 299 --------DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
                   +++ ++   P+  +++ L +G    G   KA    + MR  G+ P+V     
Sbjct: 537 TDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIV 596

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
           +I G   A+ ++  M +   + ++GI PN   Y  L  GY E+
Sbjct: 597 IIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEES 639



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 117/534 (21%), Positives = 213/534 (39%), Gaps = 99/534 (18%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G  +  EA  +   + ++G  P  +TY TL+    ++   +  + + S++ + G++P+
Sbjct: 378 LCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPN 437

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I F+ +I+   ++G ++ AM ++ +M   G  P    Y  LI G+   G  +E+ +L +
Sbjct: 438 IITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHK 497

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVY-------------KMVASGIQPDA 170
            M Q+  + PN  T + L+   C    I +A  +               ++  S   P+ 
Sbjct: 498 EM-QEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNH 556

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           V Y  L +     G  ++A +   +M+ + +RP+  TC +I+ G+ +  ++ D M     
Sbjct: 557 VMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQAD 616

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP-DVVTFSTIMDAWSSAG 289
           + ++ + PN  V+  L KG+   ++S  +  AL+   E GV+P D V      + W S  
Sbjct: 617 ILKMGIIPNSSVYRVLAKGY---EESGYLKSALSFCGE-GVQPLDRVN----SEPWGSYT 668

Query: 290 LMGKCQ--------EIFDDMVKA-GIE--------------PDIHVFSILAK----GYVR 322
           +  + Q        E     + A GI               P  H   IL K    G   
Sbjct: 669 IRSRFQLCVVTEKKECHSSYLTAFGIHSFVLLWYFHTILKPPSPH--EILKKVPFIGQKG 726

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISG-----------WCNAVKMQRAM------ 365
              P KA  +   M+     P++V  T  +S            W +A    R +      
Sbjct: 727 DQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCL 786

Query: 366 -----SIYEKMCEIGI---------NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
                ++Y K  EIG            ++ T+ +++ G+    Q   A +L   M+E   
Sbjct: 787 NNSLINMYSKCGEIGTARRLFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNK 846

Query: 412 RPKKS----------------TIQLVADSWRAIGLAREAKRVLKSAEEDRQSMP 449
           R +K+                T   V  +    GL  E K+  +S +ED    P
Sbjct: 847 RARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRP 900



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 94/233 (40%), Gaps = 25/233 (10%)

Query: 43  KRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTY 102
           +R    L L  +++ D  +PD +     ++AC++ G +D    I   ++  G        
Sbjct: 728 QRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLN 787

Query: 103 NTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV 162
           N+LI  Y   G+   + +L      D   K +  T+  ++         EEA  +  +M 
Sbjct: 788 NSLINMYSKCGEIGTARRLF-----DGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMK 842

Query: 163 ----------------ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN-QVRPNE 205
                           +S + P+ VT+  +  A +  G     +Q    M+ +  +RP  
Sbjct: 843 ETNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRI 902

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
              G +V   C+ G + +A  F+ +M    V PN VV+ +L+       DS+G
Sbjct: 903 SHFGCMVDLLCRAGLLTEAYEFILKMP---VRPNAVVWRTLLGACSLQGDSNG 952



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 82/408 (20%), Positives = 153/408 (37%), Gaps = 82/408 (20%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  +A   F+ +   G RP + T   ++    R    + ++ L + + K G+ P+
Sbjct: 566 LCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPN 625

Query: 64  SILFNAMINACSESGNVDEAMKI------------------------FQKMKDSGCKPTT 99
           S ++  +     ESG +  A+                          FQ    +  K   
Sbjct: 626 SSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSYTIRSRFQLCVVTEKKECH 685

Query: 100 STY---------------NTLIK--------------GYGNVGKPEESLKLLQLMSQDKN 130
           S+Y               +T++K              G     +P ++L+L + M  D +
Sbjct: 686 SSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGDQRPNKALQLFRQMQMD-D 744

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
            +P+  T  + + A     +++    +   +   G+  D    N+L   Y++ GE   A 
Sbjct: 745 XQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTAR 804

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           ++    Q   V     T   ++ G+   G  E+A++    MKE              K  
Sbjct: 805 RLFDGTQKKDVT----TWTSMIVGHALHGQAEEALQLFTEMKETN------------KRA 848

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA-GIEPD 309
              K +   + +L L       P+ VTF  ++ A S AGL+ + ++ F  M +   + P 
Sbjct: 849 RKNKRNGEXESSLVL-------PNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPR 901

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           I  F  +     RAG   +A   +  M    V PN V++ T++ G C+
Sbjct: 902 ISHFGCMVDLLCRAGLLTEAYEFILKMP---VRPNAVVWRTLL-GACS 945


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 197/416 (47%), Gaps = 1/416 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E G  P ++ Y T++    R+ + +   +L  ++   G+ P+ + +  +I+   ++  VD
Sbjct: 154 EFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVD 213

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
            A  +FQ+M D G KP   TYN LI GY + GK +E +++L+ MS    ++P+  TY +L
Sbjct: 214 RAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMST-HGLEPDCITYALL 272

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +   C      EA      M   GI+PD   Y  L   YA  G        L  M  N V
Sbjct: 273 LDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGV 332

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            PN R   I+   Y K+  +E+AM    +M++  + P++V F +LI     +   D    
Sbjct: 333 SPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVL 392

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
               M   GV P++  FS+++    + G   K +E+F +++  GI  D   F+ L     
Sbjct: 393 QFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLC 452

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
             G   +A+ ++  M + GV PNV+ + T+++G C   ++  A  + + M   G+ PN  
Sbjct: 453 NEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEF 512

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           TY  LL GY +A++   A  L + M  KGV P  +T   +       G   EA  +
Sbjct: 513 TYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANEL 568



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 200/435 (45%), Gaps = 37/435 (8%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   TY+ L+    R  R +   +    + K G + + I+ + ++    ++  VDEA  I
Sbjct: 88  PNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDI 147

Query: 87  FQ-KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
              +M + GC P    YNT+I G+   G+ E++  L   M  D+ + PN  TY  ++   
Sbjct: 148 LLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEM-MDQGIPPNVVTYTTVIDGL 206

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C    ++ A  V  +M+  G++PD  TYN L   Y   G+     QML EM  + + P+ 
Sbjct: 207 CKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDC 266

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG------------FLDI 253
            T  +++   CK G   +A  F   M    + P++ ++  L+ G            FLD+
Sbjct: 267 ITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDL 326

Query: 254 KDSDGV--------------------DKALTL---MEEFGVKPDVVTFSTIMDAWSSAGL 290
              +GV                    ++A+ +   M + G+ PDVV+F  ++DA    G 
Sbjct: 327 MVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGR 386

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           +      F+ M+  G+ P+I VFS L  G    G+ +KAE +   +   G+  + V F T
Sbjct: 387 VDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNT 446

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           ++   CN  ++  A  + + M  +G+ PN+ +Y TL+ G+    +   A +LL VM   G
Sbjct: 447 LMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNG 506

Query: 411 VRPKKSTIQLVADSW 425
           ++P + T  ++   +
Sbjct: 507 LKPNEFTYTILLRGY 521



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 203/402 (50%), Gaps = 1/402 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G+  +A+ +F  ++++G  P ++TYTT++  L + +       +  ++   G+
Sbjct: 168 INGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGV 227

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD+  +N +I+    +G   E +++ ++M   G +P   TY  L+      G+  E+  
Sbjct: 228 KPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARL 287

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M + K +KP+   Y IL+  + +K ++ E  + +  MV +G+ P+   +N +  AY
Sbjct: 288 FFDSMFR-KGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAY 346

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+      A  +  +M+   + P+  + G ++   CK G ++DA+    +M    V PN+
Sbjct: 347 AKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNI 406

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            VF+SL+ G   +   +  ++    + + G+  D V F+T+M    + G + + Q + D 
Sbjct: 407 FVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDL 466

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M++ G+ P++  ++ L  G+   G   +A  +L  M   G+ PN   +T ++ G+C A +
Sbjct: 467 MIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARR 526

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           +  A S++ +M   G+ P + TY T+L G  +  +   A EL
Sbjct: 527 VDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANEL 568



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 174/377 (46%), Gaps = 1/377 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F  +I+ G +P   TY  L+       ++K ++ ++ ++   G++PD I +  +++
Sbjct: 215 AKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLD 274

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              ++G   EA   F  M   G KP  + Y  L+ GY   G   E    L LM  +  V 
Sbjct: 275 YLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGN-GVS 333

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           PN R +NI+  A+  K  IEEA ++  KM   G+ PD V++  L  A  + G    A   
Sbjct: 334 PNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQ 393

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             +M N  V PN      +V G C  G  E A    + + +  +  + V FN+L+    +
Sbjct: 394 FNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCN 453

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
                   + + LM   GV+P+V++++T++      G + +  ++ D MV  G++P+   
Sbjct: 454 EGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFT 513

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++IL +GY +A     A S+   M   GV P V  + T++ G     +   A  +Y  M 
Sbjct: 514 YTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMI 573

Query: 373 EIGINPNLKTYETLLWG 389
                 ++ TY  +L G
Sbjct: 574 NSRTKCDIYTYNIILNG 590



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 172/331 (51%), Gaps = 5/331 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  +A   FN +I EG  P +  +++LV  L    +++    L  +V   G+
Sbjct: 378 IDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGI 437

Query: 61  KPDSILFNA-MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
             D++ FN  M N C+E G V EA ++   M   G +P   +YNTL+ G+   G+ +E+ 
Sbjct: 438 CVDAVFFNTLMCNLCNE-GRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAA 496

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           KLL +M  +  +KPN+ TY IL+R +C    +++A+++  +M+  G+ P   TYNT+   
Sbjct: 497 KLLDVMVSN-GLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHG 555

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             Q G    A ++   M N++ + +  T  II++G CK   +++A +   R+   +   +
Sbjct: 556 LFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLD 615

Query: 240 LVVFNSLIKGFLD-IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
            V FN +I   L   +  D +D   T+   +G+ PDVVT+  I +     G +G+   +F
Sbjct: 616 SVTFNIMIGALLKGGRKEDAMDLFATI-SAYGLVPDVVTYRLIAENLIEEGSLGEFDGLF 674

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
             M K+G  P+ H+ + L +  +  G+  +A
Sbjct: 675 SAMEKSGTAPNSHMLNALVRRLLHRGDISRA 705



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/423 (23%), Positives = 194/423 (45%), Gaps = 9/423 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  EA   F+ +  +G +P +  Y  L+     +     + S +  +  +G+
Sbjct: 273 LDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGV 332

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES-L 119
            P+  +FN M  A ++   ++EAM IF KM+  G  P   ++  LI     +G+ +++ L
Sbjct: 333 SPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVL 392

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +  Q++++   V PN   ++ LV   C+    E+A  + ++++  GI  DAV +NTL   
Sbjct: 393 QFNQMINE--GVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCN 450

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
               G    A++++  M    VRPN  +   +V+G+C  G +++A + L  M    + PN
Sbjct: 451 LCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPN 510

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
              +  L++G+   +    VD A +L  E    GV P V T++TI+      G   +  E
Sbjct: 511 EFTYTILLRGYCKARR---VDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANE 567

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           ++ +M+ +  + DI+ ++I+  G  +     +A  +   +       + V F  +I    
Sbjct: 568 LYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALL 627

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
              + + AM ++  +   G+ P++ TY  +     E       + L   ME+ G  P   
Sbjct: 628 KGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSH 687

Query: 417 TIQ 419
            + 
Sbjct: 688 MLN 690



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/415 (22%), Positives = 187/415 (45%), Gaps = 1/415 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG   E H   + ++  G  P    +  +  A  ++   +  + + +K+ + G+ PD + 
Sbjct: 314 KGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVS 373

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F A+I+A  + G VD+A+  F +M + G  P    +++L+ G   VGK E++ +L     
Sbjct: 374 FGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELF-FEV 432

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            D+ +  +   +N L+   C++  + EA  ++  M+  G++P+ ++YNTL   +   G  
Sbjct: 433 LDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRI 492

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++L  M +N ++PNE T  I++ GYCK   ++DA      M    V P +  +N++
Sbjct: 493 DEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTI 552

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + G          ++    M     K D+ T++ I++       + +  ++F  +     
Sbjct: 553 LHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDP 612

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           + D   F+I+    ++ G  + A  +  ++  YG+ P+VV +  +         +     
Sbjct: 613 QLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDG 672

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           ++  M + G  PN      L+          RA   L  ++EK    + ST  ++
Sbjct: 673 LFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSML 727



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/366 (20%), Positives = 160/366 (43%), Gaps = 6/366 (1%)

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ-----DK 129
           S S  +DEA+K+F ++       +   +N L+      G    S +++ L ++       
Sbjct: 25  SGSLGLDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSS 84

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
            V PN  TY+IL+  +C    +E  +     ++ +G + + +  + L +          A
Sbjct: 85  KVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEA 144

Query: 190 -EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
            + +L  M      P+      +++G+ +EG +E A      M +  + PN+V + ++I 
Sbjct: 145 TDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVID 204

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G    +  D        M + GVKPD  T++ ++  + S G   +  ++ ++M   G+EP
Sbjct: 205 GLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEP 264

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D   +++L     + G  ++A     SM + G+ P+V ++  ++ G+     +    S  
Sbjct: 265 DCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFL 324

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           + M   G++PN + +  +   Y +      A  +   M ++G+ P   +   + D+   +
Sbjct: 325 DLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKL 384

Query: 429 GLAREA 434
           G   +A
Sbjct: 385 GRVDDA 390



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 132/283 (46%), Gaps = 1/283 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  EA  + + +I  G RP +I+Y TLVA      R      L+  +  +G+KP+
Sbjct: 451 LCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPN 510

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +  ++    ++  VD+A  +F++M   G  P  +TYNT++ G    G+  E+ +L  
Sbjct: 511 EFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYL 570

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   +  K +  TYNI++   C  N ++EA+ +  ++ +   Q D+VT+N +  A  + 
Sbjct: 571 NMINSRT-KCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKG 629

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A  +   +    + P+  T  +I     +EG++ +       M++    PN  + 
Sbjct: 630 GRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHML 689

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
           N+L++  L   D       L  ++E     +  T S ++  +S
Sbjct: 690 NALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYS 732



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 129/308 (41%), Gaps = 42/308 (13%)

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM--LFEMQ 197
           I  RA      ++EA  +  +++          +N L    ++ G +  +E++  LF   
Sbjct: 19  IASRARSGSLGLDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRM 78

Query: 198 ----NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
               +++V PN  T  I++  +C+ G +E        + +     N++V + L+KG  D 
Sbjct: 79  ARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDA 138

Query: 254 KDSD-GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           K  D   D  L  M EFG  P                                   D+  
Sbjct: 139 KRVDEATDILLLRMSEFGCPP-----------------------------------DVVA 163

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++ +  G+ R G+ +KA ++   M   G+ PNVV +TTVI G C A  + RA  ++++M 
Sbjct: 164 YNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMI 223

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
           + G+ P+  TY  L+ GY    +     ++L+ M   G+ P   T  L+ D     G  R
Sbjct: 224 DRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCR 283

Query: 433 EAKRVLKS 440
           EA+    S
Sbjct: 284 EARLFFDS 291


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 211/414 (50%), Gaps = 1/414 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  +A   FN +IE G  PT++T+ T++ A  ++        L   +++ G  P++I+
Sbjct: 104 RGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIM 163

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N ++N   +   +D+A  ++++M+  G  P   T+N L+ G+   G+ E+  +LL+ +S
Sbjct: 164 YNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDIS 223

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
               + P+   ++I V   C    ++EA   +  M+  G+ P  + +N++  AY+Q G  
Sbjct: 224 V-LGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLE 282

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A +    M +  + P+  TC  ++ G    G +++A   + +M E  +  N + F  L
Sbjct: 283 DKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVL 342

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +  F    D  G       ME  G+ PDVV FS  +D  S  GL+ +   +F +M++ G+
Sbjct: 343 LDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGL 402

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+   ++ L  G+ + G+  +A  +   MR  G+ P++     +I G C   +M+ A++
Sbjct: 403 IPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAIN 462

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           ++  M + G++P++ TY TL+ GY +A     A+ L+  M   G  P  +T  +
Sbjct: 463 VFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNI 516



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 206/428 (48%), Gaps = 1/428 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  +I  G +P   T++ ++    R+       SL+  + K   +P++  +N +INAC 
Sbjct: 43  LFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACC 102

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
             G   +A+  F  M + GC PT  T+NT+I  +   G   E+ KL   + ++    PN 
Sbjct: 103 IRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGL-KEMGFSPNA 161

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
             YN L+  +     I++A  +  +M   GI PD +T+N L   + +YG     +++L +
Sbjct: 162 IMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKD 221

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           +    + P+     I VSG C  G +++AM FL  M E  + P+++ FNS+I  +     
Sbjct: 222 ISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGL 281

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D   +A  LM  FG+ P   T S+++   S  G + +  E+   M++ G+  +   F++
Sbjct: 282 EDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTV 341

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L   + + G+   A+S+   M + G+ P+VV F+  I G      ++ A +++ +M   G
Sbjct: 342 LLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKG 401

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           + PN   Y +L+ G+ +  +   A +L +VM  +G+ P   T  ++       G  R A 
Sbjct: 402 LIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAI 461

Query: 436 RVLKSAEE 443
            V     +
Sbjct: 462 NVFMDMHQ 469



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/376 (23%), Positives = 179/376 (47%), Gaps = 1/376 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN  V   +  +A+ ++  + ++G  P  IT+  LV+   +  R +    L+  +   G+
Sbjct: 168 MNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGL 227

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD  LF+  ++    +G +DEAM+    M + G  P+   +N++I  Y   G  +++ +
Sbjct: 228 LPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFE 287

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             +LM     + P+  T + L+        ++EA  ++ +M+  G+  + + +  L   +
Sbjct: 288 AYKLMVH-FGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKF 346

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A+ +  EM+   + P+       + G  K+G +E+A      M    + PN 
Sbjct: 347 FKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNN 406

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +NSLI GF      +   K   +M   G+ PD+ T + I+      G M     +F D
Sbjct: 407 FAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMD 466

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M + G+ PDI  ++ L  GY +A +   A++++  M   G +P++  +   I G+C++ +
Sbjct: 467 MHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRR 526

Query: 361 MQRAMSIYEKMCEIGI 376
           M RA+ + +++   GI
Sbjct: 527 MNRAVLMLDELVSAGI 542



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 78/355 (21%), Positives = 161/355 (45%), Gaps = 1/355 (0%)

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           ++L++L  M ++  V+P+     IL +           W +   ++  G QP   T++ +
Sbjct: 4   QALEILGRM-REVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGI 62

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
              + + G  +  E +L  M      PN     I+++  C  G   DA+ +   M E   
Sbjct: 63  ILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGC 122

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           +P +V FN++I  F    +     K    ++E G  P+ + ++T+M+ +     + +   
Sbjct: 123 NPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANM 182

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           ++++M K GI PD   F+IL  G+ + G  +  + +L  +   G+ P+  +F   +SG C
Sbjct: 183 LYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLC 242

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
            A ++  AM     M E G++P++  + +++  Y +A    +A E  ++M   G+ P  S
Sbjct: 243 WAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPS 302

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNS 471
           T   +       G  +EA  ++    E   S+ N    + ++   ++ ++  + S
Sbjct: 303 TCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQS 357


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 210/411 (51%), Gaps = 1/411 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  +A   FN +IE G  PT++T+ T++ A  ++        L   +++ G  P++I+
Sbjct: 314 RGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIM 373

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N ++N   +   +D+A  ++++M+  G  P   T+N L+ G+   G+ E+  +LL+ +S
Sbjct: 374 YNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDIS 433

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
               + P+   ++I V   C    ++EA   +  M+  G+ P  + +N++  AY+Q G  
Sbjct: 434 V-LGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLE 492

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A +    M +  + P+  TC  ++ G    G +++A   + +M E  +  N + F  L
Sbjct: 493 DKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVL 552

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +  F    D  G       ME  G+ PDVV FS  +D  S  GL+ +   +F +M++ G+
Sbjct: 553 LDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGL 612

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+   ++ L  G+ + G+  +A  +   MR  G+ P++     +I G C   +M+ A++
Sbjct: 613 IPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAIN 672

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           ++  M + G++P++ TY TL+ GY +A     A+ L+  M   G  P  +T
Sbjct: 673 VFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTT 723



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 206/428 (48%), Gaps = 1/428 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  +I  G +P   T++ ++    R+       SL+  + K   +P++  +N +INAC 
Sbjct: 253 LFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACC 312

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
             G   +A+  F  M + GC PT  T+NT+I  +   G   E+ KL   + ++    PN 
Sbjct: 313 IRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGL-KEMGFSPNA 371

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
             YN L+  +     I++A  +  +M   GI PD +T+N L   + +YG     +++L +
Sbjct: 372 IMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKD 431

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           +    + P+     I VSG C  G +++AM FL  M E  + P+++ FNS+I  +     
Sbjct: 432 ISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGL 491

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D   +A  LM  FG+ P   T S+++   S  G + +  E+   M++ G+  +   F++
Sbjct: 492 EDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTV 551

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L   + + G+   A+S+   M + G+ P+VV F+  I G      ++ A +++ +M   G
Sbjct: 552 LLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKG 611

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           + PN   Y +L+ G+ +  +   A +L +VM  +G+ P   T  ++       G  R A 
Sbjct: 612 LIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAI 671

Query: 436 RVLKSAEE 443
            V     +
Sbjct: 672 NVFMDMHQ 679



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 187/389 (48%), Gaps = 1/389 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN  V   +  +A+ ++  + ++G  P  IT+  LV+   +  R +    L+  +   G+
Sbjct: 378 MNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGL 437

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD  LF+  ++    +G +DEAM+    M + G  P+   +N++I  Y   G  +++ +
Sbjct: 438 LPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFE 497

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             +LM     + P+  T + L+        ++EA  ++ +M+  G+  + + +  L   +
Sbjct: 498 AYKLMVH-FGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKF 556

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A+ +  EM+   + P+       + G  K+G +E+A      M    + PN 
Sbjct: 557 FKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNN 616

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +NSLI GF      +   K   +M   G+ PD+ T + I+      G M     +F D
Sbjct: 617 FAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMD 676

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M + G+ PDI  ++ L  GY +A +   A++++  M   G +P++  +   I G+C++ +
Sbjct: 677 MHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRR 736

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           M RA+ + +++   GI PN  TY ++L G
Sbjct: 737 MNRAVLMLDELVSAGIVPNTVTYNSMLNG 765



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/393 (22%), Positives = 184/393 (46%), Gaps = 16/393 (4%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P    +   V+ L    R    +  +  + + G+ P  I FN++I A S++G  D+A
Sbjct: 436 GLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKA 495

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            + ++ M   G  P+ ST ++L+ G    G+ +E+ +L+  M + K +  N+  + +L+ 
Sbjct: 496 FEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIE-KGLSVNNMAFTVLLD 554

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +  +  +  A ++  +M   GI PD V ++      ++ G    A  +  EM    + P
Sbjct: 555 KFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIP 614

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N      ++ G+CK G + +A++    M+   + P++   N +I G              
Sbjct: 615 NNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVF 674

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M + G+ PD++T++T+++ +  A  M     + + M  +G  PD+  ++I   G+  +
Sbjct: 675 MDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSS 734

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
               +A  +L  +   G+ PN V + ++++G C+ + + RAM +  ++ ++   PN+ T 
Sbjct: 735 RRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSDI-LDRAMILTARLLKMAFVPNVVTA 793

Query: 384 --------------ETLLWGYGEAKQPWRAEEL 402
                          TL+WG+  ++ P+  +E+
Sbjct: 794 NLLLSQFYKQGMPERTLMWGHKLSEIPYAFDEI 826



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/372 (21%), Positives = 169/372 (45%), Gaps = 1/372 (0%)

Query: 100 STYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVY 159
           S  ++L++ + N     ++L++L  M ++  V+P+     IL +           W +  
Sbjct: 197 SVLDSLMRAFVNAEMGFQALEILGRM-REVGVRPSASGVAILFKLLLRVGDYGNVWKLFK 255

Query: 160 KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEG 219
            ++  G QP   T++ +   + + G  +  E +L  M      PN     I+++  C  G
Sbjct: 256 DVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRG 315

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
              DA+ +   M E   +P +V FN++I  F    +     K    ++E G  P+ + ++
Sbjct: 316 RTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYN 375

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
           T+M+ +     + +   ++++M K GI PD   F+IL  G+ + G  +  + +L  +   
Sbjct: 376 TLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVL 435

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
           G+ P+  +F   +SG C A ++  AM     M E G++P++  + +++  Y +A    +A
Sbjct: 436 GLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKA 495

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVES 459
            E  ++M   G+ P  ST   +       G  +EA  ++    E   S+ N    + ++ 
Sbjct: 496 FEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDK 555

Query: 460 IHRKQNLSASNS 471
             ++ ++  + S
Sbjct: 556 FFKRGDVVGAQS 567



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 115/254 (45%), Gaps = 2/254 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G   EA+ +F  ++ +G  P    Y +L+    +  +    L L   +   G+ PD
Sbjct: 591 LSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPD 650

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
               N +I    + G +  A+ +F  M  +G  P   TYNTLI GY        +  L+ 
Sbjct: 651 IFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVN 710

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M    +  P+  TYNI +  +CS   +  A  ++ ++V++GI P+ VTYN++       
Sbjct: 711 RMYASGS-NPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCS- 768

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
               RA  +   +      PN  T  +++S + K+G  E  + + +++ E+    + + +
Sbjct: 769 DILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPERTLMWGHKLSEIPYAFDEITY 828

Query: 244 NSLIKGFLDIKDSD 257
             + K    ++D+D
Sbjct: 829 KIMDKAHHILEDAD 842



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/277 (20%), Positives = 121/277 (43%)

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR 226
           + D    ++L RA+      ++A ++L  M+   VRP+     I+     + G+  +  +
Sbjct: 193 ESDFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWK 252

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
               +      P    F+ +I GF         +  L LM +F  +P+   ++ +++A  
Sbjct: 253 LFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACC 312

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
             G        F+ M++ G  P +  F+ +   + + G   +A  +   +++ G  PN +
Sbjct: 313 IRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAI 372

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
           M+ T+++G+    ++ +A  +YE+M + GI P+  T+  L+ G+ +  +    + LL+ +
Sbjct: 373 MYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDI 432

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
              G+ P +S   +        G   EA   L    E
Sbjct: 433 SVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLE 469


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 191/388 (49%), Gaps = 2/388 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG- 59
           M+   G G   +A  I   L  +G  P ++TYT LV    +  R +    ++ ++++ G 
Sbjct: 260 MDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGD 319

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +  D + +  MIN   + G +D+A ++  +M+D+G       YNT+I G   +G+ EE  
Sbjct: 320 IVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQ 379

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K+LQ M +D  ++P+  +YN L+  +C + S+ +A+ +   MV +G+    +TYNTL + 
Sbjct: 380 KVLQEM-EDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKG 438

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           +        A ++ F M    V PNE +C  ++ G  K G  E A+          +  N
Sbjct: 439 FCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKN 498

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           ++ FN++I G   I      ++ L  M+E    PD +T+ T+ D +   G +G    + +
Sbjct: 499 VITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMN 558

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            M   G  P + +F+    G+  A +  K   I + M   G+ PN+V +  +I+GWC   
Sbjct: 559 KMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEG 618

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLL 387
            +  A ++Y +M   G+NPN+     L+
Sbjct: 619 NLHEACNLYFEMVNNGMNPNVFICSALM 646



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/434 (22%), Positives = 211/434 (48%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N LV  G P  A  ++  +   G  P   T   +  A  R  R    +  + ++E  G+
Sbjct: 190 LNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGL 249

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + + + ++A+++     G  ++A +I + ++  G  P   TY  L+KGY   G+ EE+ +
Sbjct: 250 EVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAER 309

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +++ M +  ++  ++  Y +++  +C +  +++A  V  +M  +GI  +   YNT+    
Sbjct: 310 VVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGL 369

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G     +++L EM++  +RP++ +   ++ GYC+EG+M  A      M    +    
Sbjct: 370 CKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATT 429

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +N+L+KGF  +   D   +   LM + GV P+ ++ ST++D    AG   +   ++ +
Sbjct: 430 LTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKE 489

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
            +  G+  ++  F+ +  G  + G   +AE +L  M++    P+ + + T+  G+C   +
Sbjct: 490 TLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQ 549

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  +  KM  +G  P+++ + + + G+  AKQ  +  ++   M  +G+ P   T   
Sbjct: 550 LGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGA 609

Query: 421 VADSWRAIGLAREA 434
           +   W   G   EA
Sbjct: 610 LIAGWCKEGNLHEA 623



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 218/467 (46%), Gaps = 50/467 (10%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKV--EKDGMKP-----------DSILFNAMIN 72
           RP+L+++  L+  L R +RF    +L+S +    + + P            ++ F+ ++ 
Sbjct: 97  RPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLR 156

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
           A +++G +  A+ +F  M   GC+P+  + N L+      G P  +  +   M +   V 
Sbjct: 157 AHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM-RIAGVL 215

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ------------------------- 167
           P++ T  I+ +A+C    + +A   V +M   G++                         
Sbjct: 216 PDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRI 275

Query: 168 ----------PDAVTYNTLARAYAQYGETYRAEQMLFEM-QNNQVRPNERTCGIIVSGYC 216
                     P+ VTY  L + Y + G    AE+++ EM +   +  +E   G++++GYC
Sbjct: 276 LESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYC 335

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           + G M+DA R    M++  +H NL V+N++I G   +   + V K L  ME+ G++PD  
Sbjct: 336 QRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKY 395

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           +++T++D +   G M K  E+   MV+ G+      ++ L KG+        A  +   M
Sbjct: 396 SYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLM 455

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
            K GV PN +  +T++ G   A K ++A++++++    G+  N+ T+ T++ G  +  + 
Sbjct: 456 LKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRM 515

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             AEELL  M+E    P   T + + D +  +G    A  ++   E 
Sbjct: 516 AEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEH 562



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 113/499 (22%), Positives = 224/499 (44%), Gaps = 62/499 (12%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  +A  + N + + G    L  Y T++  L +  R + +  ++ ++E  GM+PD   
Sbjct: 337 RGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYS 396

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I+     G++ +A ++ + M  +G   TT TYNTL+KG+ ++   +++L+L  LM 
Sbjct: 397 YNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLML 456

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + + V PN+ + + L+         E+A N+  + +A G+  + +T+NT+     + G  
Sbjct: 457 K-RGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRM 515

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             AE++L  M+  +  P+  T   +  GYCK G +  A   + +M+ L   P++ +FNS 
Sbjct: 516 AEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSF 575

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G    K    V+   + M   G+ P++VT+  ++  W   G + +   ++ +MV  G+
Sbjct: 576 ITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGM 635

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV--------------------- 345
            P++ + S L   + + G+  +A  +L  +    + P                       
Sbjct: 636 NPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGN 695

Query: 346 -----VMFTTVISGWCNAVKMQRAMSIYEK------------------------------ 370
                VM+  +I G C + ++  A S++E                               
Sbjct: 696 PHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAF 755

Query: 371 -----MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
                M   G+ PN+ TY +L++G  ++ +  RA  L   ++ KG+ P   T   + D +
Sbjct: 756 SLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEY 815

Query: 426 RAIGLAREAKRVLKSAEED 444
              G   EA ++ +   E+
Sbjct: 816 CKEGKTTEAFKLKQKMVEE 834



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 106/427 (24%), Positives = 201/427 (47%), Gaps = 14/427 (3%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G  P  I+ +TL+  L +  + +  L+L  +    G+  + I FN +IN   + G 
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGR 514

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           + EA ++  +MK+  C P + TY TL  GY  +G+   +  L+  M +     P+   +N
Sbjct: 515 MAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKM-EHLGFAPSVEMFN 573

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
             +          +  ++  +M A G+ P+ VTY  L   + + G  + A  + FEM NN
Sbjct: 574 SFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNN 633

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS--D 257
            + PN   C  ++S + KEG +++A   L ++  +++ P   +    I     + D+  D
Sbjct: 634 GMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIAD 693

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
           G   +  +M           ++ I+     +G +   + +F+ +      PD   +S L 
Sbjct: 694 GNPHSANVM-----------WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLI 742

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            G   +G   +A S+   M   G+ PN++ + ++I G C + K+ RA++++ K+   GI+
Sbjct: 743 HGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGIS 802

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           PN  TY TL+  Y +  +   A +L Q M E+G++P   T  ++       G   EA ++
Sbjct: 803 PNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKL 862

Query: 438 LKSAEED 444
           L    E+
Sbjct: 863 LDQMIEN 869



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 157/324 (48%), Gaps = 27/324 (8%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           H+ + I + +   G  P L+TY  L+A   ++       +L  ++  +GM P+  + +A+
Sbjct: 586 HKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSAL 645

Query: 71  INACSESGNVDEAMKIFQKMKD----SGCKPTT----------------------STYNT 104
           ++   + G VDEA  + QK+ +     GC  +T                        +N 
Sbjct: 646 MSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNV 705

Query: 105 LIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS 164
           +I G    G+  ++  L + + ++K   P++ TY+ L+    +  SI+EA+++   M+++
Sbjct: 706 IIFGLCKSGRIADAKSLFESL-RNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSA 764

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           G+ P+ +TYN+L     + G+  RA  +  ++Q+  + PN  T   ++  YCKEG   +A
Sbjct: 765 GLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEA 824

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
            +   +M E  + P ++ ++ LI G       +   K L  M E  V P+ +T+ T++  
Sbjct: 825 FKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHG 884

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEP 308
           +  +G M +  +++D+M   G+ P
Sbjct: 885 YIKSGNMEEISKLYDEMHIRGLLP 908


>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
 gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
          Length = 877

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 225/457 (49%), Gaps = 48/457 (10%)

Query: 22  EEGHRPTLITYTTLVAALTR------QKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           EEG   +L+TY+ +V    +              SL+ ++E++G+     +++ M+N  +
Sbjct: 365 EEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYT 424

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
             GN ++ + +F+++K+ G  P+  +Y  LI  Y  +GK  ++L++ ++M +   +K N 
Sbjct: 425 MIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMM-ESAGIKHNM 483

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           +TY++L+  +        A+ V   ++  G++PD V YN + +A+   G   RA  M+ E
Sbjct: 484 KTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKE 543

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           MQ  + RP  RT   I+ G+ + G M  A+     M+     P +  FN+L+ G ++ + 
Sbjct: 544 MQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQ 603

Query: 256 SDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI-- 310
              ++KA+ +++E    GV PD  T++TIM+ +++ G  GK  E F  +   G+E D+  
Sbjct: 604 ---MEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFT 660

Query: 311 ---------------------------------HVFSILAKGYVRAGEPQKAESILTSMR 337
                                             V++IL  G+ R G+  +A  ++  M+
Sbjct: 661 YEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMK 720

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
           + GV P++  +T+ I+  C A  M RA    ++M  +G+ PN+KTY TL+ G+  A  P 
Sbjct: 721 QEGVQPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPE 780

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           +A    + M+  G++P K+    +  S  +     EA
Sbjct: 781 KALRCFEEMKLAGLKPDKAVYHCLMTSLLSRATVAEA 817



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 192/388 (49%), Gaps = 7/388 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+    GK  +A  +   +   G +  + TY+ L+    + K + +  ++   V KDG+
Sbjct: 455 INMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGL 514

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD +L+N +I A    GN+D A+ + ++M+    +PT+ T+  +I G+   G+   +L+
Sbjct: 515 KPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALE 574

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +  +M +   + P   T+N LV     K  +E+A  ++ +M  +G+ PD  TY T+   Y
Sbjct: 575 IFDMMRRSGCI-PTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGY 633

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A  G+T +A +   +++N  +  +  T   ++   CK G M+ A+     M    +  N 
Sbjct: 634 AALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNT 693

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            V+N LI G+    D       +  M++ GV+PD+ T+++ ++A   AG M +  +   +
Sbjct: 694 FVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQE 753

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G++P++  ++ L  G+  A  P+KA      M+  G+ P+  ++  +++   +   
Sbjct: 754 MEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDKAVYHCLMTSLLSRAT 813

Query: 361 MQRA------MSIYEKMCEIGINPNLKT 382
           +  A      +SI  +M E  +  ++ T
Sbjct: 814 VAEAYIYSGILSICREMIESELTVDMGT 841



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/390 (23%), Positives = 180/390 (46%), Gaps = 7/390 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN     G   +   +F  L E G  P++I+Y  L+   T+  +    L +   +E  G+
Sbjct: 420 MNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGI 479

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K +   ++ +IN   +  +   A  +F+ +   G KP    YN +IK +  +G  + ++ 
Sbjct: 480 KHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIH 539

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +++ M Q K  +P  RT+  ++  +     +  A  +   M  SG  P   T+N L    
Sbjct: 540 MVKEM-QKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGL 598

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +  +A ++L EM    V P+E T   I++GY   G+   A  +  +++   +  ++
Sbjct: 599 VEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDV 658

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFG---VKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             + +L+K       S  +  AL +  E     +  +   ++ ++D W+  G + +  ++
Sbjct: 659 FTYEALLKACC---KSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADL 715

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
              M + G++PDIH ++       +AG+  +A   +  M   GV PNV  +TT+I GW  
Sbjct: 716 MQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWAC 775

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           A   ++A+  +E+M   G+ P+   Y  L+
Sbjct: 776 ASLPEKALRCFEEMKLAGLKPDKAVYHCLM 805



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/433 (22%), Positives = 199/433 (45%), Gaps = 42/433 (9%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P    +  +V    R+            +   G+ P S ++ ++I+A +   +++EA+ 
Sbjct: 299 KPARREFGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALS 358

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK------LLQLMSQDKNVKPNDRTYN 139
             +KMK+ G + +  TY+ ++ G+  +G  ++S        L++ M ++    P D  Y+
Sbjct: 359 CVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPID-IYH 417

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++  +    + E+   V  ++   G  P  ++Y  L   Y + G+  +A ++   M++ 
Sbjct: 418 TMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESA 477

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            ++ N +T  ++++G+ K  +  +A      + +  + P++V++N++IK F  + + D  
Sbjct: 478 GIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRA 537

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
              +  M++   +P   TF  I+  ++ AG M +  EIFD M ++G  P +H F+ L  G
Sbjct: 538 IHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLG 597

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW------------------------ 355
            V   + +KA  IL  M   GV P+   +TT+++G+                        
Sbjct: 598 LVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELD 657

Query: 356 -----------CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
                      C + +MQ A+++  +M    I  N   Y  L+ G+      W A +L+Q
Sbjct: 658 VFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQ 717

Query: 405 VMEEKGVRPKKST 417
            M+++GV+P   T
Sbjct: 718 QMKQEGVQPDIHT 730



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 139/293 (47%), Gaps = 6/293 (2%)

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KP  R + ++V  +  +  +  A      M   GI P +  Y +L  AYA   +   A  
Sbjct: 299 KPARREFGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALS 358

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEG------NMEDAMRFLYRMKELEVHPNLVVFNS 245
            + +M+   V  +  T  I+V G+ K G      NM+ A   +  M+E  +   + ++++
Sbjct: 359 CVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHT 418

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           ++ G+  I + +        ++E G  P V+++  +++ ++  G + K  E+   M  AG
Sbjct: 419 MMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAG 478

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           I+ ++  +S+L  G+++  +   A ++   + K G+ P+VV++  +I  +C    M RA+
Sbjct: 479 IKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAI 538

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            + ++M +    P  +T+  ++ G+  A +  RA E+  +M   G  P   T 
Sbjct: 539 HMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTF 591



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 133/292 (45%), Gaps = 6/292 (2%)

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           E W  V        +P    +  +   YA+ G+ +RA Q    M+   + P+      ++
Sbjct: 285 ENWQAVVSAFERIKKPARREFGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLI 344

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD---GVDKALTL---M 266
             Y    +ME+A+  + +MKE  V  +LV ++ ++ GF  I ++D    +D+A +L   M
Sbjct: 345 HAYAVGRDMEEALSCVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREM 404

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           EE G+   +  + T+M+ ++  G   KC  +F  + + G  P +  +  L   Y + G+ 
Sbjct: 405 EEEGIDAPIDIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKV 464

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            KA  +   M   G+  N+  ++ +I+G+        A +++E + + G+ P++  Y  +
Sbjct: 465 SKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNI 524

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           +  +       RA  +++ M++K  RP   T   +   +   G  R A  + 
Sbjct: 525 IKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIF 576



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 121/251 (48%), Gaps = 6/251 (2%)

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           +P  R  G++V  Y + G+M  A +    M+   ++P+  V+ SLI  +   +D +    
Sbjct: 299 KPARREFGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALS 358

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGL------MGKCQEIFDDMVKAGIEPDIHVFSI 315
            +  M+E GV+  +VT+S ++  ++  G       M + + +  +M + GI+  I ++  
Sbjct: 359 CVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHT 418

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           +  GY   G  +K   +   +++ G  P+V+ +  +I+ +    K+ +A+ + + M   G
Sbjct: 419 MMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAG 478

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           I  N+KTY  L+ G+ + K    A  + + + + G++P       +  ++  +G    A 
Sbjct: 479 IKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAI 538

Query: 436 RVLKSAEEDRQ 446
            ++K  ++ R 
Sbjct: 539 HMVKEMQKKRH 549


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 191/388 (49%), Gaps = 2/388 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG- 59
           M+   G G   +A  I   L  +G  P ++TYT LV    +  R +    ++ ++++ G 
Sbjct: 260 MDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGD 319

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +  D + +  MIN   + G +D+A ++  +M+D+G       YNT+I G   +G+ EE  
Sbjct: 320 IVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQ 379

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K+LQ M +D  ++P+  +YN L+  +C + S+ +A+ +   MV +G+    +TYNTL + 
Sbjct: 380 KVLQEM-EDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKG 438

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           +        A ++ F M    V PNE +C  ++ G  K G  E A+          +  N
Sbjct: 439 FCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKN 498

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           ++ FN++I G   I      ++ L  M+E    PD +T+ T+ D +   G +G    + +
Sbjct: 499 VITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMN 558

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            M   G  P + +F+    G+  A +  K   I + M   G+ PN+V +  +I+GWC   
Sbjct: 559 KMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEG 618

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLL 387
            +  A ++Y +M   G+NPN+     L+
Sbjct: 619 NLHEACNLYFEMVNNGMNPNVFICSALM 646



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/434 (22%), Positives = 211/434 (48%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N LV  G P  A  ++  +   G  P   T   +  A  R  R    +  + ++E  G+
Sbjct: 190 LNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGL 249

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + + + ++A+++     G  ++A +I + ++  G  P   TY  L+KGY   G+ EE+ +
Sbjct: 250 EVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAER 309

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +++ M +  ++  ++  Y +++  +C +  +++A  V  +M  +GI  +   YNT+    
Sbjct: 310 VVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGL 369

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G     +++L EM++  +RP++ +   ++ GYC+EG+M  A      M    +    
Sbjct: 370 CKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATT 429

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +N+L+KGF  +   D   +   LM + GV P+ ++ ST++D    AG   +   ++ +
Sbjct: 430 LTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKE 489

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
            +  G+  ++  F+ +  G  + G   +AE +L  M++    P+ + + T+  G+C   +
Sbjct: 490 TLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQ 549

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  +  KM  +G  P+++ + + + G+  AKQ  +  ++   M  +G+ P   T   
Sbjct: 550 LGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGA 609

Query: 421 VADSWRAIGLAREA 434
           +   W   G   EA
Sbjct: 610 LIAGWCKEGNLHEA 623



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 218/467 (46%), Gaps = 50/467 (10%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKV--EKDGMKP-----------DSILFNAMIN 72
           RP+L+++  L+  L R +RF    +L+S +    + + P            ++ F+ ++ 
Sbjct: 97  RPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLR 156

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
           A +++G +  A+ +F  M   GC+P+  + N L+      G P  +  +   M +   V 
Sbjct: 157 AHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM-RIAGVL 215

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ------------------------- 167
           P++ T  I+ +A+C    + +A   V +M   G++                         
Sbjct: 216 PDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRI 275

Query: 168 ----------PDAVTYNTLARAYAQYGETYRAEQMLFEM-QNNQVRPNERTCGIIVSGYC 216
                     P+ VTY  L + Y + G    AE+++ EM +   +  +E   G++++GYC
Sbjct: 276 LESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYC 335

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           + G M+DA R    M++  +H NL V+N++I G   +   + V K L  ME+ G++PD  
Sbjct: 336 QRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKY 395

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           +++T++D +   G M K  E+   MV+ G+      ++ L KG+        A  +   M
Sbjct: 396 SYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLM 455

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
            K GV PN +  +T++ G   A K ++A++++++    G+  N+ T+ T++ G  +  + 
Sbjct: 456 LKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRM 515

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             AEELL  M+E    P   T + + D +  +G    A  ++   E 
Sbjct: 516 AEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEH 562



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/499 (22%), Positives = 224/499 (44%), Gaps = 62/499 (12%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  +A  + N + + G    L  Y T++  L +  R + +  ++ ++E  GM+PD   
Sbjct: 337 RGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYS 396

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I+     G++ +A ++ + M  +G   TT TYNTL+KG+ ++   +++L+L  LM 
Sbjct: 397 YNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLML 456

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + + V PN+ + + L+         E+A N+  + +A G+  + +T+NT+     + G  
Sbjct: 457 K-RGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRM 515

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             AE++L  M+  +  P+  T   +  GYCK G +  A   + +M+ L   P++ +FNS 
Sbjct: 516 AEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSF 575

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G    K    V+   + M   G+ P++VT+  ++  W   G + +   ++ +MV  G+
Sbjct: 576 ITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGM 635

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV--------------------- 345
            P++ + S L   + + G+  +A  +L  +    + P                       
Sbjct: 636 NPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGN 695

Query: 346 -----VMFTTVISGWCNAVKMQRAMSIYEK------------------------------ 370
                VM+  +I G C + ++  A S++E                               
Sbjct: 696 PHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAF 755

Query: 371 -----MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
                M   G+ PN+ TY +L++G  ++ +  RA  L   ++ KG+ P   T   + D +
Sbjct: 756 SLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEY 815

Query: 426 RAIGLAREAKRVLKSAEED 444
              G   EA ++ +   E+
Sbjct: 816 CKEGKTTEAFKLKQKMVEE 834



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 187/393 (47%), Gaps = 14/393 (3%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G  P  I+ +TL+  L +  + +  L+L  +    G+  + I FN +IN   + G 
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGR 514

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           + EA ++  +MK+  C P + TY TL  GY  +G+   +  L+  M +     P+   +N
Sbjct: 515 MAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKM-EHLGFAPSVEMFN 573

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
             +          +  ++  +M A G+ P+ VTY  L   + + G  + A  + FEM NN
Sbjct: 574 SFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNN 633

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS--D 257
            + PN   C  ++S + KEG +++A   L ++  +++ P   +    I     + D+  D
Sbjct: 634 GMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIAD 693

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
           G   +  +M           ++ I+     +G +   + +F+ +      PD   +S L 
Sbjct: 694 GNPHSANVM-----------WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLI 742

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            G   +G   +A S+   M   G+ PN++ + ++I G C + K+ RA++++ K+   GI+
Sbjct: 743 HGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGIS 802

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           PN  TY TL+  Y +  +   A +L Q M E+G
Sbjct: 803 PNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG 835



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 143/305 (46%), Gaps = 43/305 (14%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           H+ + I + +   G  P L+TY  L+A   ++       +L  ++  +GM P+  + +A+
Sbjct: 586 HKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSAL 645

Query: 71  INACSESGNVDEAMKIFQKMKD----SGCKPTT----------------------STYNT 104
           ++   + G VDEA  + QK+ +     GC  +T                        +N 
Sbjct: 646 MSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNV 705

Query: 105 LIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS 164
           +I G    G+  ++  L + + ++K   P++ TY+ L+    +  SI+EA+++   M+++
Sbjct: 706 IIFGLCKSGRIADAKSLFESL-RNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSA 764

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN---- 220
           G+ P+ +TYN+L     + G+  RA  +  ++Q+  + PN  T   ++  YCKEG     
Sbjct: 765 GLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEA 824

Query: 221 ------------MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
                       ME+A++ L +M E  V PN + + +LI G++   + + + K    M  
Sbjct: 825 FKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHI 884

Query: 269 FGVKP 273
            G+ P
Sbjct: 885 RGLLP 889



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 35/219 (15%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           +  G PH A+ ++N +I                 L +  R     SL   +      PD+
Sbjct: 691 IADGNPHSANVMWNVII---------------FGLCKSGRIADAKSLFESLRNKRFLPDN 735

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
             ++++I+ C+ SG++DEA  +   M  +G  P   TYN+LI G    GK   ++ L   
Sbjct: 736 FTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNK 795

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           + Q K + PN  TYN L+  +C +    EA+ +  KMV  G   +A+             
Sbjct: 796 L-QSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAI------------- 841

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED 223
                 ++L +M  N V PN  T   ++ GY K GNME+
Sbjct: 842 ------KLLDQMIENNVDPNYITYCTLIHGYIKSGNMEE 874



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 20/200 (10%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  +A  +F  L  +   P   TY++L+             SL   +   G+ P+
Sbjct: 710 LCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPN 769

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I +N++I    +SG +  A+ +F K++  G  P   TYNTLI  Y   GK  E+ KL Q
Sbjct: 770 IITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQ 829

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M ++                      +EEA  ++ +M+ + + P+ +TY TL   Y + 
Sbjct: 830 KMVEE--------------------GYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKS 869

Query: 184 GETYRAEQMLFEMQNNQVRP 203
           G      ++  EM    + P
Sbjct: 870 GNMEEISKLYDEMHIRGLLP 889


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 193/379 (50%), Gaps = 1/379 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN +    +P  A      +++ G  P L+T+T+L+       R +  L+L  ++   G 
Sbjct: 124 MNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGF 183

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ + +  +I+   ++ +++ A++IF +M D+G +P   TYN+L+ G   +G+  ++  
Sbjct: 184 RPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAW 243

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M + + ++PN  T+  L+ A+     I EA  +   M+   + PD  TY  L    
Sbjct: 244 LLRDMMK-RGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGL 302

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
             YG    A QM + M++N   PNE T   ++ G+CK   +ED  +  Y M +  +  N 
Sbjct: 303 CTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANT 362

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +  LI+G+  +   D   +    M      PD+ T++ ++D     G + K   IF  
Sbjct: 363 ITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKY 422

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M K  ++ +I  ++I+ +G  + G+ + A  +  S+   G+ PNV+ +TT+ISG+C    
Sbjct: 423 MRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGF 482

Query: 361 MQRAMSIYEKMCEIGINPN 379
           +  A ++++KM E G  PN
Sbjct: 483 IHEADALFKKMKEDGFLPN 501



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 203/442 (45%), Gaps = 36/442 (8%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSL------------------- 51
           +EA  +F  ++     P+++ +T L++ + + KRF  ++SL                   
Sbjct: 64  NEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIV 123

Query: 52  ----------------ISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGC 95
                           + K+ K G +PD + F ++++       +++A+ +F ++   G 
Sbjct: 124 MNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGF 183

Query: 96  KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
           +P   TY TLI           ++++   M  D  ++PN  TYN LV   C      +A 
Sbjct: 184 RPNVVTYTTLIHCLCKNRHLNHAVEIFNQMG-DNGIRPNVVTYNSLVSGLCEIGRWSDAA 242

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
            ++  M+  GIQP+ +T+  L  A+ + G+   A+++   M    V P+  T   +++G 
Sbjct: 243 WLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGL 302

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C  G +++A +  Y M+    +PN V + +LI GF   K  +   K    M + G+  + 
Sbjct: 303 CTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANT 362

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           +T++ ++  +   G     QE+F+ M      PDI  +++L  G    G  +KA  I   
Sbjct: 363 ITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKY 422

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           MRK  +  N+V +T +I G C   K++ A  ++  +   G+ PN+ TY T++ G+     
Sbjct: 423 MRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGF 482

Query: 396 PWRAEELLQVMEEKGVRPKKST 417
              A+ L + M+E G  P +S 
Sbjct: 483 IHEADALFKKMKEDGFLPNESV 504



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 169/359 (47%), Gaps = 1/359 (0%)

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           +EA+ +F +M  S   P+   +  L+     + + +  + L + M Q   + P   T NI
Sbjct: 64  NEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQM-QILGISPVLYTCNI 122

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           ++   C  +    A   + KM+  G +PD VT+ +L   +  +     A  +  ++    
Sbjct: 123 VMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMG 182

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
            RPN  T   ++   CK  ++  A+    +M +  + PN+V +NSL+ G  +I       
Sbjct: 183 FRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAA 242

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
             L  M + G++P+V+TF+ ++DA+   G + + +E++  M++  + PD+  ++ L  G 
Sbjct: 243 WLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGL 302

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
              G   +A  +   M   G +PN V +TT+I G+C + +++    I+ +M + G+  N 
Sbjct: 303 CTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANT 362

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            TY  L+ GY    +P  A+E+   M  +   P   T  ++ D     G   +A  + K
Sbjct: 363 ITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFK 421



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 6/283 (2%)

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           Y  ++R         EA ++  +MV S   P  V +  L    A+         +  +MQ
Sbjct: 50  YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQ 109

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
              + P   TC I+++  C+      A  FL +M +L   P+LV F SL+ GF      +
Sbjct: 110 ILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFC---HWN 166

Query: 258 GVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
            ++ AL L ++    G +P+VVT++T++        +    EIF+ M   GI P++  ++
Sbjct: 167 RIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYN 226

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            L  G    G    A  +L  M K G+ PNV+ FT +I  +    K+  A  +Y+ M ++
Sbjct: 227 SLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQM 286

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            + P++ TY  L+ G     +   A ++  +ME  G  P + T
Sbjct: 287 SVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVT 329



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 45/98 (45%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   +A  IF  + +      ++TYT ++  + +  + +    L   +   GMKP+
Sbjct: 407 LCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPN 466

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTST 101
            I +  MI+     G + EA  +F+KMK+ G  P  S 
Sbjct: 467 VITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNESV 504


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/476 (24%), Positives = 225/476 (47%), Gaps = 1/476 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+LV   K      + + ++  G +P + T+  L+ AL R  + +  + ++ ++   G+
Sbjct: 183 LNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGL 242

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   F  ++    E GN++ A++I ++M  +GC  +  T N L+ GY   G+ EE L 
Sbjct: 243 SPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLS 302

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            +  MS ++  +P+  T+N LV   C    ++ A  ++  M+  G  PD  TYN+L    
Sbjct: 303 FIDEMS-NEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGL 361

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + GE   A ++L +M      PN  T   ++S  CKE  +E+A      +    + P++
Sbjct: 362 CKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDV 421

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FNSLI+G     +     +    M+  G  PD  T++ ++D+  S G + +   +  +
Sbjct: 422 CTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKE 481

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M  +G   ++  ++ L  G+ +    ++AE I   M   G+  NVV + T+I G C   +
Sbjct: 482 MESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRR 541

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           ++ A  + ++M   G+ P+  TY +LL  +  A    +A +++Q M   G  P   T   
Sbjct: 542 VEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGT 601

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQI 476
           +       G    A R+L++ +     +  +     ++++ R++  S +   F ++
Sbjct: 602 LILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREM 657



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 208/421 (49%), Gaps = 1/421 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M   + +G  + A  I   ++  G   + +T   LV    ++ R + +LS I ++  +G 
Sbjct: 253 MQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGF 312

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD   FN+++N     G+V  A++I   M   G  P   TYN+LI G   +G+ EE+++
Sbjct: 313 RPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVE 372

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M   ++  PN  TYN L+   C +N +EEA  +   + + GI PD  T+N+L +  
Sbjct: 373 ILNQMIL-RDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 431

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                   A ++  EM+     P+E T  +++   C  G +E+A+  L  M+      N+
Sbjct: 432 CLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNV 491

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+LI GF   K  +  ++    ME  G+  +VVT++T++D       + +  ++ D 
Sbjct: 492 VTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQ 551

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  G++PD   ++ L   + RAG+ +KA  I+ +M   G  P+ V + T+I G   A +
Sbjct: 552 MLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGR 611

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           ++ A  +   +   G+    +TY  ++      K+   A  L + M EKG  P   T ++
Sbjct: 612 VELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKV 671

Query: 421 V 421
           V
Sbjct: 672 V 672



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 205/420 (48%), Gaps = 7/420 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKD-GMKPDSILFNAMINACSESGNVDEAMK 85
           P   T   L  AL RQ    SIL L+    K     P S+++  ++    + G+     +
Sbjct: 67  PQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRR 126

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           + Q+MK +GC+    T+  LI+ Y      +E++ ++ +M ++  +K +  TYN L+   
Sbjct: 127 VLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVL 186

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
              N ++    V  +MV+ GI+PD  T+N L +A  +  +   A  M+ EM +  + P+E
Sbjct: 187 VDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDE 246

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
           +T   ++ G+ +EGNM  A+R   +M       + V  N L+ G+        +++ L+ 
Sbjct: 247 KTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYC---KEGRIEEVLSF 303

Query: 266 MEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           ++E    G +PD  TF+++++     G +    EI D M++ G +PDI  ++ L  G  +
Sbjct: 304 IDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCK 363

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            GE ++A  IL  M      PN V + T+IS  C   +++ A  +   +   GI P++ T
Sbjct: 364 LGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 423

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           + +L+ G         A EL + M+ KG  P + T  ++ DS  + G   EA  +LK  E
Sbjct: 424 FNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEME 483



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 214/453 (47%), Gaps = 16/453 (3%)

Query: 1   MNILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
           +N+LV     +G+  E     + +  EG RP   T+ +LV  L R    K  L ++  + 
Sbjct: 284 VNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVML 343

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           ++G  PD   +N++I    + G V+EA++I  +M      P T TYNTLI       + E
Sbjct: 344 QEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVE 403

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           E+ +L ++++  K + P+  T+N L++  C  N+   A  +  +M   G  PD  TYN L
Sbjct: 404 EATELARVLTS-KGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNML 462

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
             +    G    A  +L EM+++    N  T   ++ G+CK   +E+A      M+   +
Sbjct: 463 IDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGI 522

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGK 293
             N+V +N+LI G    +    V++A  LM++    G+KPD  T+++++  +  AG + K
Sbjct: 523 SRNVVTYNTLIDGLCKNRR---VEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKK 579

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
             +I   M   G EPD   +  L  G  +AG  + A  +L +++  G+      +  VI 
Sbjct: 580 AADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIK 639

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP-WRAEELLQVMEEKGVR 412
                 +   A+ ++ +M E G  P+  TY+ +  G      P   A + L  M +KG  
Sbjct: 640 ALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFL 699

Query: 413 PKKSTIQLVADSWRAIG----LAREAKRVLKSA 441
           P  S+  ++A+   A+     L +   RV+K A
Sbjct: 700 PDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQA 732



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 207/430 (48%), Gaps = 2/430 (0%)

Query: 12  EAHYIFNCLIEE-GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           EA  + + + EE G +    TY  L+  L    + K +  + S++   G+KPD   FN +
Sbjct: 158 EAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNIL 217

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           I A   +  +  A+ + ++M   G  P   T+ TL++G+   G    +L++ + M     
Sbjct: 218 IKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVA-AG 276

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
              ++ T N+LV  +C +  IEE  + + +M   G +PD  T+N+L     + G    A 
Sbjct: 277 CPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHAL 336

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           ++L  M      P+  T   ++ G CK G +E+A+  L +M   +  PN V +N+LI   
Sbjct: 337 EILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTL 396

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
                 +   +   ++   G+ PDV TF++++             E+F++M   G  PD 
Sbjct: 397 CKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDE 456

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             +++L       G  ++A S+L  M   G   NVV + T+I G+C   +++ A  I+++
Sbjct: 457 FTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDE 516

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M   GI+ N+ TY TL+ G  + ++   A +L+  M  +G++P K T   +   +   G 
Sbjct: 517 MELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGD 576

Query: 431 AREAKRVLKS 440
            ++A  ++++
Sbjct: 577 IKKAADIVQT 586



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 1/101 (0%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA-CSESGNVDEAMKIFQK 89
           TY  ++ AL R+KR    + L  ++ + G  PD++ +  +    CS  G + EA+    +
Sbjct: 633 TYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVE 692

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           M D G  P  S++  L +G   +   +  +KL+  + +  N
Sbjct: 693 MTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQAN 733


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 207/419 (49%), Gaps = 1/419 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           + + +  +G +P ++T+ +++  L + +RF     +   +++  + PD   FN +I    
Sbjct: 214 LVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFC 273

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
             G V+EAMK +++M+  G  P   +++ LI  +   GK + +   L+ M +   + P+ 
Sbjct: 274 RVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREM-KGLGLVPDG 332

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
             Y +++  +C   S+ EA  V  +MV  G  PD VTYNTL     +      AE++L E
Sbjct: 333 VIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNE 392

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M+   V P+  T   ++ GYC++GN E A++    +    + P++V +NSLI G     D
Sbjct: 393 MKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGD 452

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
               ++    M    + P+ VT+S ++D+    G + +     D+MV  G  P+I  ++ 
Sbjct: 453 LAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNS 512

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           + KGY R+G  +K +  L  M +  + P+++ F T+I G+     M  A +++  M +  
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEM 572

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           + P+  TY  ++ G+ E      A  + + M   G+ P + T   + +     G ++EA
Sbjct: 573 VQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEA 631



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 227/470 (48%), Gaps = 42/470 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G PH A   +  ++         T   +V +  +   F    ++IS++EK  + PD +  
Sbjct: 136 GWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTH 195

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I+A   +G+VD A+ +   M + G KP   T+N+++KG     + +++ ++ + M Q
Sbjct: 196 NVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQ 255

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
             +V P+ R++NIL+  +C    +EEA     +M   G+ PD V+++ L   ++  G+  
Sbjct: 256 -CSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMD 314

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR--------------------- 226
            A   L EM+   + P+     +++ G+C+ G+M +A+R                     
Sbjct: 315 HAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLL 374

Query: 227 --------------FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF--- 269
                          L  MKE  V P+L  F +LI G+   +D +  +KAL L +     
Sbjct: 375 NGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGY--CRDGN-FEKALQLFDTLLHQ 431

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
            ++PDVV +++++D     G + K  E++DDM    I P+   +SIL   +   G+ ++A
Sbjct: 432 RLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEA 491

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
              L  M   G  PN++ + ++I G+C +  +++     +KM +  I P+L T+ TL+ G
Sbjct: 492 FGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHG 551

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           Y + +    A  +  +ME++ V+P   T  ++ + +   G   EA RV K
Sbjct: 552 YIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFK 601



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/385 (23%), Positives = 196/385 (50%), Gaps = 5/385 (1%)

Query: 1   MNILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
            NIL+G     G+  EA   +  + + G  P +++++ L+   + + +     + + +++
Sbjct: 265 FNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMK 324

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
             G+ PD +++  +I     +G++ EA+++  +M   GC P   TYNTL+ G     +  
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLL 384

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           ++ +LL  M +++ V P+  T+  L+  +C   + E+A  +   ++   ++PD V YN+L
Sbjct: 385 DAEELLNEM-KERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSL 443

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
                + G+  +A ++  +M   ++ PN  T  I++  +C++G +E+A  FL  M     
Sbjct: 444 IDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGN 503

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            PN++ +NS+IKG+    +     + L  M +  + PD++TF+T++  +     M     
Sbjct: 504 LPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFN 563

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F+ M K  ++PD   ++++  G+   G  ++A  +   M   G+ P+   + ++I+G  
Sbjct: 564 VFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHV 623

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLK 381
            A   + A  ++++M   G  P+ K
Sbjct: 624 TAGNSKEAFQLHDEMMHRGFAPDDK 648



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 192/405 (47%), Gaps = 7/405 (1%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F  + +    P + ++  L+    R    +  +    ++++ G+ PD + F+ +I
Sbjct: 245 KAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLI 304

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
              S  G +D A    ++MK  G  P    Y  +I G+   G   E+L++   M      
Sbjct: 305 GLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMV-GLGC 363

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  TYN L+   C ++ + +A  ++ +M   G+ PD  T+ TL   Y + G   +A Q
Sbjct: 364 LPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQ 423

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +   + + ++RP+      ++ G C++G++  A      M   E+ PN V ++ LI    
Sbjct: 424 LFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHC 483

Query: 252 DIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
              +   V++A   ++E    G  P+++T+++I+  +  +G + K Q+    M++  I P
Sbjct: 484 ---EKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILP 540

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D+  F+ L  GY++      A ++   M K  V P+ V +  +I+G+     M+ A  ++
Sbjct: 541 DLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVF 600

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           +KM   GI P+  TY +L+ G+  A     A +L   M  +G  P
Sbjct: 601 KKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAP 645



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 179/381 (46%), Gaps = 7/381 (1%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            N M+++  +S   D+A  +  +M+     P   T+N LI      G  + ++ L+  M+
Sbjct: 160 LNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMA 219

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +K +KP   T+N +++  C     ++A  V   M    + PD  ++N L   + + GE 
Sbjct: 220 -NKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEV 278

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A +   EMQ   V P+  +   ++  +   G M+ A  +L  MK L + P+ V++  +
Sbjct: 279 EEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMV 338

Query: 247 IKGFLDIKDSDGVDKALTLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           I GF     +  + +AL + +E    G  PDVVT++T+++       +   +E+ ++M +
Sbjct: 339 IGGFCR---AGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKE 395

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ PD+  F+ L  GY R G  +KA  +  ++    + P+VV + ++I G C    + +
Sbjct: 396 RGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAK 455

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  +++ M    I PN  TY  L+  + E  Q   A   L  M  KG  P   T   +  
Sbjct: 456 ANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIK 515

Query: 424 SWRAIGLAREAKRVLKSAEED 444
            +   G  ++ ++ L+   +D
Sbjct: 516 GYCRSGNVKKGQQFLQKMMQD 536



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 158/391 (40%), Gaps = 84/391 (21%)

Query: 157 VVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
           +V  ++AS   P    ++ L R Y Q  +   A +    + +++V         +++   
Sbjct: 74  IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALS 133

Query: 217 KEG---NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
           + G     E+A R +    + EV  N    N ++  +    + D  D  ++ ME+  V P
Sbjct: 134 RAGWPHLAEEAYRLVLS-SDSEV--NAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFP 190

Query: 274 DVVTFSTIMDAWSSAG---------------------------LMGKC--------QEIF 298
           DVVT + ++DA   AG                           L G C        +E+F
Sbjct: 191 DVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVF 250

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF---------- 348
             M +  + PD+  F+IL  G+ R GE ++A      M++ GV P+VV F          
Sbjct: 251 RAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTR 310

Query: 349 -------------------------TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
                                    T VI G+C A  M  A+ + ++M  +G  P++ TY
Sbjct: 311 GKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTY 370

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            TLL G  +  +   AEELL  M+E+GV P   T   +   +   G   +A ++  +   
Sbjct: 371 NTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLH 430

Query: 444 DRQSMPNKKDEIA----VESIHRKQNLSASN 470
            R     + D +A    ++ + RK +L+ +N
Sbjct: 431 QRL----RPDVVAYNSLIDGMCRKGDLAKAN 457


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 196/415 (47%), Gaps = 1/415 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P + T   L+ +     R     S+++K+ K G +PD   F  +I      G + EA
Sbjct: 86  GVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEA 145

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +F KM D G +P   TY TLI G   VG    +++LL+ M Q  N +P+   Y  ++ 
Sbjct: 146 LHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ-GNCQPDVVIYTSIID 204

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C    + EA+N+  +MV  GI PD  TY +L  A     E      +L +M N+++ P
Sbjct: 205 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 264

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +      +V   CKEG + +A   +  M +  V P++V + +L+ G     + D   K  
Sbjct: 265 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVF 324

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            +M   G  PDV++++T+++ +     + K   +F++M +    PD   ++ L  G    
Sbjct: 325 DMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHV 384

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G  Q A ++   M   G  P++V ++ ++   C    ++ AM++ + +    +NP+++ Y
Sbjct: 385 GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVY 444

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             ++ G   A +   A +L   +  KG+ P   T  ++       GL  EA ++ 
Sbjct: 445 NIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLF 499



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 222/448 (49%), Gaps = 9/448 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA ++F+ +I+EG +P ++TY TL+  L +     + + L+  +E+   +PD
Sbjct: 136 LCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPD 195

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++ ++I++  +   V EA  +F +M   G  P   TY +L+    N+ + +    LL 
Sbjct: 196 VVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLN 255

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K + P+   ++ +V A C +  + EA  +V  M+  G++PD VTY TL   +   
Sbjct: 256 QMVNSK-ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQ 314

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E   A ++   M      P+  +   +++GYCK   ++ AM     M   E  P+   +
Sbjct: 315 SEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTY 374

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N+L+ G   +     +  A+ L  E    G  PD+VT+S ++D+      + +   +   
Sbjct: 375 NTLMHGLCHVGR---LQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKA 431

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +  + + PDI V++I+  G  RAGE + A  + +++   G+HP+V  +  +I G C    
Sbjct: 432 IEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGL 491

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ +M     +P+  TY T+  G+ +  +  RA +LL+ M  +G     ST  L
Sbjct: 492 LNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTL 551

Query: 421 VADSWRAIGLAREAKRVLKS--AEEDRQ 446
           + +     GL + +  ++ S  +E+DR+
Sbjct: 552 LVEMLSDDGLDQSSCFLMLSVLSEDDRR 579



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 206/457 (45%), Gaps = 36/457 (7%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           FN L+     P+++ +  L+ ++ + K + ++LSL ++++  G+ P+    N +IN+   
Sbjct: 44  FNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCH 103

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
              V  A  +  K+   G +P  +T+ T                                
Sbjct: 104 LNRVGFAFSVLAKILKLGHQPDPTTFTT-------------------------------- 131

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
               L+R  C +  I EA ++  KM+  G QP+ VTY TL     + G T  A ++L  M
Sbjct: 132 ----LIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM 187

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
           +    +P+      I+   CK+  + +A     +M    + P++  + SL+    ++ + 
Sbjct: 188 EQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEW 247

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
             V   L  M    + PDVV FST++DA    G + +  EI D M++ G+EPD+  ++ L
Sbjct: 248 KHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTL 307

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G+    E  +A  +   M + G  P+V+ +TT+I+G+C   K+ +AM ++E+MC    
Sbjct: 308 MDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEW 367

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            P+ KTY TL+ G     +   A  L   M  +G  P   T  ++ DS        EA  
Sbjct: 368 IPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMA 427

Query: 437 VLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF 473
           +LK+ E    +   +   I ++ + R   L A+   F
Sbjct: 428 LLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLF 464



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 147/293 (50%), Gaps = 7/293 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +GK  EAH I + +I+ G  P ++TYTTL+     Q      + +   + + G 
Sbjct: 273 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 332

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I +  +IN   +   +D+AM +F++M      P T TYNTL+ G  +VG+ ++++ 
Sbjct: 333 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIA 392

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M   +   P+  TY+IL+ + C    +EEA  ++  + AS + PD   YN +    
Sbjct: 393 LFHEMVA-RGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGM 451

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + GE   A  +   + +  + P+  T  I++ G CK G + +A +    M   +  P+ 
Sbjct: 452 CRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDG 511

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGL 290
             +N++ +GFL    ++   +A+ L+EE    G   DV T + +++  S  GL
Sbjct: 512 CTYNTIARGFL---QNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGL 561



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 129/300 (43%), Gaps = 35/300 (11%)

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
           N++++A +   +++     P  V +  L  + A+         +  +M +  V PN  T 
Sbjct: 35  NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTL 94

Query: 209 GIIVS-----------------------------------GYCKEGNMEDAMRFLYRMKE 233
            I+++                                   G C EG + +A+    +M +
Sbjct: 95  NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 154

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
               PN+V + +LI G   + ++    + L  ME+   +PDVV +++I+D+      + +
Sbjct: 155 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTE 214

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
              +F  MV  GI PDI  ++ L        E +   ++L  M    + P+VV+F+TV+ 
Sbjct: 215 AFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVD 274

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             C   K+  A  I + M + G+ P++ TY TL+ G+    +   A ++  +M  KG  P
Sbjct: 275 ALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAP 334


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 214/405 (52%), Gaps = 2/405 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  +A  + N ++++G  P ++TY ++V AL + +       ++ ++   G++PD + 
Sbjct: 277 QGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLT 336

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           + A+I+  S SG+  E+ K+F+KM   G  P   T+N+ +      G+ +++ ++ Q M+
Sbjct: 337 YTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMT 396

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K   P+  +Y+IL+  + ++    +  N+ + M   GI  +   +N L  A+A+ G  
Sbjct: 397 T-KGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMM 455

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A  +  EMQ   VRP+  T   ++S +C+ G + DAM    +M  + + PN VV++SL
Sbjct: 456 DEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSL 515

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGV-KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           I GF    D     + ++ M   G+ +P++V FS+I+ +  + G +    ++F+ ++  G
Sbjct: 516 IHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIG 575

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
             P I  F+ L  GY   G+ +KA  +L +M   G+ P+VV + T++SG+C + K+   +
Sbjct: 576 DRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGL 635

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
            ++ +M    + P   TY  +L G   A +   A+++   M + G
Sbjct: 636 ILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSG 680



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 204/406 (50%), Gaps = 8/406 (1%)

Query: 16  IFN--CLIEEGHRP---TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           +FN  C  E G R    ++ TY  L+    R +R     +  +++ + G++  +I  N  
Sbjct: 138 LFNRICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTF 197

Query: 71  INACSESGNVDEAMKIF-QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK 129
           +     +   DEA+ +   +M D GC P   +YNT+IK      + +E+L ++Q M+++ 
Sbjct: 198 LKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEG 257

Query: 130 N-VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
               P+  ++N ++  +  +  + +A N++ +MV  G++PD VTYN++  A  +     +
Sbjct: 258 GRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDK 317

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           AE +L +M +  V P+  T   I+ GY   G+ +++ +   +M    + P +V FNS + 
Sbjct: 318 AELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMS 377

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
                  S   ++    M   G  PD+V++S ++  +++ G       +F  M   GI  
Sbjct: 378 SLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVA 437

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           + H F+IL   + + G   +A  + T M+  GV P+VV ++T+IS +C   ++  AM  +
Sbjct: 438 NCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKF 497

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV-RP 413
            +M  IG+ PN   Y +L+ G+       +A+EL+  M  KG+ RP
Sbjct: 498 SQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRP 543



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 205/453 (45%), Gaps = 39/453 (8%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK--PDSILFNAMINACSESGNVD 81
           G  P  I+Y T++ +L    R +  L ++ ++ K+G +  PD + FN +I+   + G V 
Sbjct: 222 GCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVS 281

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +A  +  +M   G +P   TYN+++         +++  +L+ M  DK V+P+  TY  +
Sbjct: 282 KACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMV-DKGVEPDGLTYTAI 340

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +  +      +E+  +  KM + G+ P  VT+N+   +  ++G +  AE++   M     
Sbjct: 341 IHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGH 400

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            P+  +  I++ GY  EG   D     + M +  +  N   FN LI         D    
Sbjct: 401 MPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAML 460

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
             T M+  GV+PDVVT+ST++ A+   G +    E F  M+  G+EP+  V+  L  G+ 
Sbjct: 461 VFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFC 520

Query: 322 RAGEPQKAESILTSMRKYGV------------------------------------HPNV 345
             G+  KA+ +++ M   G+                                     P +
Sbjct: 521 MHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTI 580

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
           V F ++I G+C   KM++A  + + M  +GI P++ TY TL+ GY ++ +      L + 
Sbjct: 581 VTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFRE 640

Query: 406 MEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           M  K V+P   T  +V D     G    AK++ 
Sbjct: 641 MLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMF 673



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 204/418 (48%), Gaps = 10/418 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   G+  +A  IF  +  +GH P L++Y+ L+     + RF  + +L   +   G+
Sbjct: 376 MSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGI 435

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL- 119
             +   FN +I+A ++ G +DEAM +F +M+  G +P   TY+TLI  +  +G+  +++ 
Sbjct: 436 VANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAME 495

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGI-QPDAVTYNTLAR 178
           K  Q++S    ++PN   Y+ L+  +C    + +A  +V +M++ GI +P+ V ++++  
Sbjct: 496 KFSQMISI--GLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIH 553

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           +    G    A  +   + +   RP   T   ++ GYC  G ME A   L  M  + + P
Sbjct: 554 SLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEP 613

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           ++V +N+L+ G+     S  +D  L L  E     VKP  VT+S ++D    AG     +
Sbjct: 614 DVVTYNTLVSGYC---KSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAK 670

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           ++F +M+ +G   DI  + IL KG  R     +A ++   +       ++ +  TVI+  
Sbjct: 671 KMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINAL 730

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
               + + A  ++  +   G+ PN+ TY  ++    +      A+ +   ME+ G  P
Sbjct: 731 YKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAP 788



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/433 (21%), Positives = 202/433 (46%), Gaps = 2/433 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           E+  +F  +  +G  P ++T+ + +++L +  R K    +   +   G  PD + ++ ++
Sbjct: 352 ESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILL 411

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +  +  G   +   +F  M D G       +N LI  +   G  +E++ +   M Q + V
Sbjct: 412 HGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEM-QGQGV 470

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +P+  TY+ L+ A+C    + +A     +M++ G++P+ V Y++L   +  +G+  +A++
Sbjct: 471 RPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKE 530

Query: 192 MLFEMQNNQV-RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           ++ EM +  + RPN      I+   C EG + DA      +  +   P +V FNSLI G+
Sbjct: 531 LVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGY 590

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
             +   +     L  M   G++PDVVT++T++  +  +G +     +F +M+   ++P  
Sbjct: 591 CLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTT 650

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             +SI+  G   AG    A+ +   M   G   ++  +  ++ G C       A++++ K
Sbjct: 651 VTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHK 710

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           +  +    ++    T++    + ++   A +L   +   G+ P  ST  ++  +    G 
Sbjct: 711 LGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGS 770

Query: 431 AREAKRVLKSAEE 443
             EA  +  S E+
Sbjct: 771 VEEADTMFSSMEK 783



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/440 (21%), Positives = 191/440 (43%), Gaps = 55/440 (12%)

Query: 12  EAHYIFNCLIEEG---HRPTLITYTTLVAALTRQKRFKS-------ILSLISKV--EKDG 59
           +AH++F+ L+ +G   H P L      +AAL R     S       +L+L +++  E+ G
Sbjct: 92  DAHHLFDELLRQGTPVHNPAL---NGFLAALARAPDSVSCSNGPALVLALFNRICREEAG 148

Query: 60  --MKPDSI-LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
             + P S+  +  +++ C  +   D     F ++  +G +  T   NT +K   +  + +
Sbjct: 149 PRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTD 208

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG--IQPDAVTYN 174
           E++ +L     D    PN  +YN ++++ C  +  +EA ++V +M   G    PD V++N
Sbjct: 209 EAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFN 268

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           T                                   ++ G+ K+G +  A   +  M + 
Sbjct: 269 T-----------------------------------VIHGFFKQGEVSKACNLINEMVQK 293

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            V P++V +NS++      +  D  +  L  M + GV+PD +T++ I+  +S +G   + 
Sbjct: 294 GVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKES 353

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
            ++F  M   G+ P I  F+       + G  + AE I   M   G  P++V ++ ++ G
Sbjct: 354 AKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHG 413

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
           +    +     +++  M + GI  N   +  L+  + +      A  +   M+ +GVRP 
Sbjct: 414 YATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPD 473

Query: 415 KSTIQLVADSWRAIGLAREA 434
             T   +  ++  +G   +A
Sbjct: 474 VVTYSTLISAFCRMGRLADA 493



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/370 (21%), Positives = 170/370 (45%), Gaps = 43/370 (11%)

Query: 1   MNILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
            NIL+     +G   EA  +F  +  +G RP ++TY+TL++A  R  R    +   S++ 
Sbjct: 442 FNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMI 501

Query: 57  KDGMKPDSILFNAMINA-------------------------------------CSESGN 79
             G++P++++++++I+                                      C+E G 
Sbjct: 502 SIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNE-GR 560

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V +A  +F  +   G +PT  T+N+LI GY  VGK E++  +L  M     ++P+  TYN
Sbjct: 561 VMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVS-VGIEPDVVTYN 619

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            LV  +C    I++   +  +M+   ++P  VTY+ +       G T  A++M  EM ++
Sbjct: 620 TLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDS 679

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
               +  T  I++ G C+    ++A+   +++  ++   ++ + N++I     ++  +  
Sbjct: 680 GTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEA 739

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
           +     +   G+ P+V T+  ++      G + +   +F  M K+G  P   + + + + 
Sbjct: 740 NDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRM 799

Query: 320 YVRAGEPQKA 329
            ++ G+  KA
Sbjct: 800 LLQKGDIVKA 809



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 139/309 (44%), Gaps = 9/309 (2%)

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA-EQMLF 194
            TY IL+   C     +       +++ +G++   +  NT  +       T  A + +L 
Sbjct: 157 HTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLH 216

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL--EVHPNLVVFNSLIKGFLD 252
            M +    PN  +   ++   C +   ++A+  + RM +      P++V FN++I GF  
Sbjct: 217 RMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFK 276

Query: 253 IKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
             +   V KA  L+ E    GV+PDVVT+++I+DA   A  M K + +   MV  G+EPD
Sbjct: 277 QGE---VSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPD 333

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
              ++ +  GY  +G  +++  +   M   G+ P +V F + +S  C   + + A  I++
Sbjct: 334 GLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQ 393

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
            M   G  P+L +Y  LL GY    +      L   M +KG+        ++  +    G
Sbjct: 394 YMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRG 453

Query: 430 LAREAKRVL 438
           +  EA  V 
Sbjct: 454 MMDEAMLVF 462



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 139/286 (48%), Gaps = 1/286 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  +AH +FN +I  G RPT++T+ +L+       + +    ++  +   G++PD
Sbjct: 555 LCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPD 614

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +++   +SG +D+ + +F++M     KPTT TY+ ++ G  + G+   + K+  
Sbjct: 615 VVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFH 674

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D     +  TY IL++  C  +  +EA  + +K+ A   + D    NT+  A  + 
Sbjct: 675 EM-IDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKV 733

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                A  +   +  + + PN  T G+++    KEG++E+A      M++    P+  + 
Sbjct: 734 RRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLL 793

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
           N +I+  L   D       ++ ++   +  +  T S +M  +SS G
Sbjct: 794 NDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKG 839



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 11/277 (3%)

Query: 168 PDAVT-YNTLARAYAQYGETYRAEQMLFEMQNNQVRP-NERTCGIIVSGYCKEGNMEDAM 225
           PD+V+  N  A   A +    R E         +V P +  T GI++   C+    +   
Sbjct: 123 PDSVSCSNGPALVLALFNRICREEA------GPRVAPLSVHTYGILMDCCCRARRPDLGP 176

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD-GVDKALTLMEEFGVKPDVVTFSTIMDA 284
            F  R+    +    +  N+ +K     K +D  VD  L  M + G  P+ ++++T++ +
Sbjct: 177 AFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKS 236

Query: 285 WSSAGLMGKCQEIFDDMVKAG--IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
                   +  ++   M K G    PD+  F+ +  G+ + GE  KA +++  M + GV 
Sbjct: 237 LCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVE 296

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           P+VV + +++   C A  M +A  +  +M + G+ P+  TY  ++ GY  +     + ++
Sbjct: 297 PDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKM 356

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            + M  KG+ P   T      S    G +++A+ + +
Sbjct: 357 FRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQ 393



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/256 (21%), Positives = 105/256 (41%), Gaps = 36/256 (14%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  + + ++  G  P ++TY TLV+   +  +    L L  ++    +KP ++ +
Sbjct: 594 GKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTY 653

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSG--------------------------------- 94
           + +++    +G    A K+F +M DSG                                 
Sbjct: 654 SIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGA 713

Query: 95  --CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIE 152
             CK   +  NT+I     V + EE+  L   +S    V PN  TY +++     + S+E
Sbjct: 714 MDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLV-PNVSTYGVMIHNLLKEGSVE 772

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           EA  +   M  SG  P +   N + R   Q G+  +A   + ++    +     T  +++
Sbjct: 773 EADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLM 832

Query: 213 SGYCKEGNMEDAMRFL 228
           S +  +G   + ++FL
Sbjct: 833 SLFSSKGKHREQIKFL 848



 Score = 43.1 bits (100), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 56/122 (45%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L    +  EA+ +F  +   G  P + TY  ++  L ++   +   ++ S +EK G 
Sbjct: 727 INALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGC 786

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P S L N +I    + G++ +A     K+  +      ST + L+  + + GK  E +K
Sbjct: 787 APSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIK 846

Query: 121 LL 122
            L
Sbjct: 847 FL 848


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 235/473 (49%), Gaps = 37/473 (7%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  ++N ++E G RPT++TY T++ +  +Q + +  L L+ +++K G  P+ + +N ++N
Sbjct: 174 AREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVN 233

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
             S SG +++A ++ Q+M   G + +  TY+ LI+GY   G+ +E+ +L + M   +   
Sbjct: 234 GLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEM-LSRGAV 292

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P   TYN ++   C    + +A  ++  MV   + PD V+YNTL   Y + G    A  +
Sbjct: 293 PTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLL 352

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             E++   + P+  T   ++ G C+ G+++ AMR    M +    P++  F  L++GF  
Sbjct: 353 FAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCK 412

Query: 253 IKD------------SDGV--------------------DKALTLMEEF---GVKPDVVT 277
           + +            + G+                     KA  + EE    G  PD++T
Sbjct: 413 LGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLIT 472

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           ++  +D     G + +  E+   M+  G+ PD   ++ +   ++ AG  +KA ++   M 
Sbjct: 473 YNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEML 532

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
             G+ P+VV +T +I  +    +++ A+  + +M E G++PN+ TY  L+ G  + ++  
Sbjct: 533 SKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMD 592

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           +A +    M+ KG+ P K T  ++ +    +G  +EA R+ K    DR+  P+
Sbjct: 593 QAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDM-LDREIQPD 644



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 184/385 (47%), Gaps = 9/385 (2%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG+  EA  +   ++  G  PTL+TY T++  L +  R      L+  +    + PD + 
Sbjct: 273 KGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVS 332

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I   +  GN+ EA  +F +++  G  P+  TYNTLI G   +G  + +++L     
Sbjct: 333 YNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRL----- 387

Query: 127 QDKNVK----PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           +D+ +K    P+  T+ ILVR +C   ++  A  +  +M+  G+QPD   Y T      +
Sbjct: 388 KDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELK 447

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+  +A  M  EM      P+  T  + + G  K GN+++A   + +M    + P+ V 
Sbjct: 448 LGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVT 507

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           + S+I   L              M   G+ P VVT++ ++ +++  G +      F +M 
Sbjct: 508 YTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMH 567

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           + G+ P++  ++ L  G  +  +  +A    T M+  G+ PN   +T +I+  CN    Q
Sbjct: 568 EKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQ 627

Query: 363 RAMSIYEKMCEIGINPNLKTYETLL 387
            A+ +Y+ M +  I P+  T+  LL
Sbjct: 628 EALRLYKDMLDREIQPDSCTHSALL 652



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 152/311 (48%), Gaps = 1/311 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA  +F  L   G  P+++TY TL+  L R       + L  ++ K G  PD   F
Sbjct: 344 GNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTF 403

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             ++    + GN+  A ++F +M + G +P    Y T I G   +G P ++  + + M  
Sbjct: 404 TILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLA 463

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            +   P+  TYN+ +       +++EA  +V KM+ +G+ PD VTY ++  A+   G   
Sbjct: 464 -RGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLR 522

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A  +  EM +  + P+  T  +++  Y   G ++ A+   + M E  VHPN++ +N+LI
Sbjct: 523 KARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALI 582

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G   ++  D   K  T M+  G+ P+  T++ +++   + G   +   ++ DM+   I+
Sbjct: 583 NGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQ 642

Query: 308 PDIHVFSILAK 318
           PD    S L K
Sbjct: 643 PDSCTHSALLK 653



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/421 (21%), Positives = 196/421 (46%), Gaps = 3/421 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINAC---SESG 78
           + G + + +TY  ++  L R    +S   ++ KV    M+   +    +       ++  
Sbjct: 74  QTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKKS 133

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
            +++ + +F KM   G  P     N +++   +     +  + +  +  +  ++P   TY
Sbjct: 134 MLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTY 193

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           N ++ ++C +  ++EA  ++ +M   G  P+ VTYN L    +  GE  +A++++ EM  
Sbjct: 194 NTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLR 253

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
             +  +  T   ++ GYC++G +++A R    M      P LV +N+++ G         
Sbjct: 254 LGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSD 313

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
             K L +M    + PD+V+++T++  ++  G +G+   +F ++   G+ P +  ++ L  
Sbjct: 314 ARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLID 373

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           G  R G+   A  +   M K+G  P+V  FT ++ G+C    +  A  ++++M   G+ P
Sbjct: 374 GLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQP 433

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           +   Y T + G  +   P +A  + + M  +G  P   T  +  D    +G  +EA  ++
Sbjct: 434 DRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELV 493

Query: 439 K 439
           K
Sbjct: 494 K 494


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 204/411 (49%), Gaps = 7/411 (1%)

Query: 10  PHEAHYIFN--CLIEEGHRP---TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           P  A  +FN  C  E G R    T+ TY  L+    R +R     +  +++ + G++ D 
Sbjct: 141 PALAVALFNRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDG 200

Query: 65  ILFNAMINACSESGNVDEAMK-IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           I+ N  +     +   DEA+  +  +M + GC P   +YNT+IK      + +E+L +L 
Sbjct: 201 IVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLL 260

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M++     P+  +Y +++     +  I +A N+  +MV  G+ P+ VTYN++  A  + 
Sbjct: 261 RMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKA 320

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
               +AE +L +M +N ++P+E T   ++ GY   G  ++A +    M    + P++V F
Sbjct: 321 RAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTF 380

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           NSL+      K S    +    +   G KPD++++S ++  +++ G       +F  M  
Sbjct: 381 NSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTD 440

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GI  D H F+IL   + + G   +A  I T MR  GV PNVV + TVI+  C   ++  
Sbjct: 441 NGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLAD 500

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV-RP 413
           AM    +M  IG+ PN   Y +L+ G+       +A+EL+  M ++G+ RP
Sbjct: 501 AMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRP 551



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 220/419 (52%), Gaps = 2/419 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  +A  +FN ++++G  P ++TY ++V AL + +       ++ ++  + ++PD
Sbjct: 282 LFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPD 341

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + + AMI+  S  G   EA K+F++M   G  P   T+N+L+       + +E+ ++  
Sbjct: 342 EVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFH 401

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            ++  K  KP+  +Y+IL+  + ++    +  N+ + M  +GI  D+  +N L  A+A+ 
Sbjct: 402 SIAT-KGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKR 460

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A  +  EM+   V PN  T   +++  C+ G + DAM  L +M  + + PN VV+
Sbjct: 461 GMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVY 520

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGV-KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +SLI+GF    D     + ++ M + G+ +P++  FS+I+ +  + G +   Q++F+ ++
Sbjct: 521 HSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVI 580

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G  PDI  F+ L  GY   G+  KA  +L +M   G  P+VV ++T+I+G+  + ++ 
Sbjct: 581 HIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRID 640

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             + ++ +M    + P   TY  +L G   A +   A+++   M E G     ST  ++
Sbjct: 641 DGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTII 699



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 220/442 (49%), Gaps = 4/442 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  P +++YT ++  L  +       +L +++ + G+ P+ + +N++++A  ++  +D+
Sbjct: 266 DGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDK 325

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A  + ++M D+  +P   TY  +I GY  +G+ +E+ K+ + M+++  + P+  T+N L+
Sbjct: 326 AELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTRE-GLIPDIVTFNSLM 384

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
            + C     +EA  + + +   G +PD ++Y+ L   YA  G       +   M +N + 
Sbjct: 385 DSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIV 444

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI-KDSDGVDK 261
            +     I+++ + K G M++A+     M+   V PN+V + ++I     + + +D ++K
Sbjct: 445 ADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEK 504

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI-EPDIHVFSILAKGY 320
            L+ M   G+KP+ V + +++  + + G + K +E+  +M+  GI  P+I  FS +    
Sbjct: 505 -LSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSL 563

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
              G    A+ +   +   G  P++  F ++I G+C   KM +A  + + M   G  P++
Sbjct: 564 CNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDV 623

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            TY TL+ GY ++ +      L + M  K V+P   T  LV D     G    AK++   
Sbjct: 624 VTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHE 683

Query: 441 AEEDRQSMPNKKDEIAVESIHR 462
             E   +M      I ++ + R
Sbjct: 684 MIESGTAMSISTYTIILQGLCR 705



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 104/437 (23%), Positives = 210/437 (48%), Gaps = 2/437 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F  +  EG  P ++T+ +L+ +L + KR K    +   +   G KPD I +
Sbjct: 356 GRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISY 415

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +++  +  G   +   +F  M D+G    +  +N LI  +   G  +E+L +   M +
Sbjct: 416 SILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEM-R 474

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + V PN  TY  ++ A C    + +A   + +M++ G++P+ V Y++L + +  +G+  
Sbjct: 475 GQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLI 534

Query: 188 RAEQMLFEMQNNQV-RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
           +A++++ EM +  + RPN      I+   C EG + +A      +  +   P++  FNSL
Sbjct: 535 KAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSL 594

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G+  +   D     L  M   G +PDVVT+ST+++ +  +G +     +F +M+   +
Sbjct: 595 IDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRV 654

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           +P    +S++  G  RAG    A+ +   M + G   ++  +T ++ G C       A++
Sbjct: 655 KPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAIT 714

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           ++ K+  + +   +    T++    + K+   A +L   +   G+ P  ST  ++  +  
Sbjct: 715 LFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLL 774

Query: 427 AIGLAREAKRVLKSAEE 443
             G   EA  +  S E+
Sbjct: 775 KEGSVEEADIMFSSMEK 791



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 204/418 (48%), Gaps = 10/418 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L    +  EA  IF+ +  +GH+P +I+Y+ L+     + RF  + +L   +  +G+
Sbjct: 384 MDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGI 443

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL- 119
             DS  FN +INA ++ G +DEA+ IF +M+  G  P   TY T+I     +G+  +++ 
Sbjct: 444 VADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAME 503

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGI-QPDAVTYNTLAR 178
           KL Q++S    +KPN   Y+ L++ +C+   + +A  +V +M+  GI +P+   ++++  
Sbjct: 504 KLSQMISI--GLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIH 561

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           +    G    A+ +   + +   RP+  T   ++ GYC  G M+ A   L  M      P
Sbjct: 562 SLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEP 621

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           ++V +++LI G+     S  +D  L L  E     VKP  VT+S ++D    AG     +
Sbjct: 622 DVVTYSTLINGYF---KSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAK 678

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           ++F +M+++G    I  ++I+ +G  R     +A ++   +    +   + +  T+I   
Sbjct: 679 KMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHAL 738

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
               + + A  ++  +   G+ PN  TY  ++    +      A+ +   ME+ G  P
Sbjct: 739 YKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAP 796



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/369 (20%), Positives = 160/369 (43%), Gaps = 10/369 (2%)

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKP-----TTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           ACS++  +  A+ +F ++      P     T  TY  L+       +P+        + +
Sbjct: 136 ACSDAPAL--AVALFNRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLR 193

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWN-VVYKMVASGIQPDAVTYNTLARAYAQYGET 186
              ++ +    N  ++  C     +EA + ++++M   G  PDA +YNT+ ++      +
Sbjct: 194 -AGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRS 252

Query: 187 YRAEQMLFEM-QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
             A  ML  M + +   P+  +  +++ G   EG +  A      M +  V PN+V +NS
Sbjct: 253 QEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNS 312

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           ++      +  D  +  L  M +  ++PD VT++ ++  +S  G   +  ++F +M + G
Sbjct: 313 IVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREG 372

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + PDI  F+ L     +    ++A  I  S+   G  P+++ ++ ++ G+    +     
Sbjct: 373 LIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMN 432

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           +++  M + GI  +   +  L+  + +      A  +   M  +GV P   T   V  + 
Sbjct: 433 NLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAAL 492

Query: 426 RAIGLAREA 434
             +G   +A
Sbjct: 493 CRMGRLADA 501



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 108/240 (45%), Gaps = 8/240 (3%)

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD-GVDKALT 264
            T GI++   C+    +    F  R+    +  + +V N+ +K     K +D  +   L 
Sbjct: 166 HTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLH 225

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA----GIEPDIHVFSILAKGY 320
            M E G  PD  +++T++ +        + QE  D +++     G  PD+  ++++  G 
Sbjct: 226 RMSELGCVPDAFSYNTVIKSLCGGS---RSQEALDMLLRMTKGDGCSPDVVSYTMVIHGL 282

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
              GE  KA ++   M + GV PNVV + +++   C A  M +A  +  +M +  I P+ 
Sbjct: 283 FMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDE 342

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            TY  ++ GY    +   A ++ + M  +G+ P   T   + DS      ++EA  +  S
Sbjct: 343 VTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHS 402


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/436 (25%), Positives = 216/436 (49%), Gaps = 1/436 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   EA  + N +  +G +PTL TY  ++  L ++ R+     + +++   G+
Sbjct: 227 INAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGL 286

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD+  +N ++     + N  EA  IF  M   G  P   ++++LI      G  +++L 
Sbjct: 287 SPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALM 346

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             + M +   + P++  Y IL+  +C    + EA  +  KM+  G   D V YNT+    
Sbjct: 347 YFRDM-KTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGL 405

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A  +  EM    V P+  T   ++ G+CKEGNM  A+     M +  + P++
Sbjct: 406 CKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDI 465

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N LI GF    + +  ++    M    + P+ ++++ +++ + + G + +   ++D+
Sbjct: 466 VTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDE 525

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M++ GI+P +   + + KGY R+G+  KA+  L  M   GV P+ + + T+I+G+     
Sbjct: 526 MIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEY 585

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M +A  +  KM   G+ P++ TY  +L G+    +   AE +L+ M E+G+ P +ST   
Sbjct: 586 MDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTT 645

Query: 421 VADSWRAIGLAREAKR 436
           + + + +    +EA R
Sbjct: 646 LINGYVSQDNLKEAFR 661



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 202/422 (47%), Gaps = 1/422 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV  G    A  ++N +   G    + T   +V AL +  +   +   +  +E+ G+  D
Sbjct: 160 LVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFAD 219

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +INA    G + EA ++   M   G KPT  TYN +I G    G+   +  +  
Sbjct: 220 IVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFN 279

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M     + P+  TYN L+   C  N+  EA ++   M+  G+ PD +++++L    ++ 
Sbjct: 280 EMLS-IGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRN 338

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G   +A     +M+ + + P+     I+++GYC+ G M +A+    +M E     ++V +
Sbjct: 339 GHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAY 398

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+++ G    K     +     M E GV PD  TF+T++      G MGK   +F  M +
Sbjct: 399 NTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQ 458

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
             I+PDI  ++IL  G+ +  E +KA  +   M    + PN + +  +++G+CN   +  
Sbjct: 459 KNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSE 518

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  ++++M   GI P L T  T++ GY  +    +A+E L  M  +GV P   T   + +
Sbjct: 519 AFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLIN 578

Query: 424 SW 425
            +
Sbjct: 579 GF 580



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 198/413 (47%), Gaps = 34/413 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  KG+   A  +FN ++  G  P   TY TL+    R   F     + S +   G+
Sbjct: 262 INGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGV 321

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I F+++I   S +G++D+A+  F+ MK SG  P    Y  LI GY   G   E+L+
Sbjct: 322 SPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALE 381

Query: 121 LLQLMSQ----------------------------------DKNVKPNDRTYNILVRAWC 146
           +   M +                                  ++ V P+  T+  L+   C
Sbjct: 382 IRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHC 441

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            + ++ +A ++   M    I+PD VTYN L   + +  E  +A ++  EM + ++ PN  
Sbjct: 442 KEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHI 501

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           +  I+V+GYC  G + +A R    M    + P LV  N++IKG+    D    D+ L  M
Sbjct: 502 SYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKM 561

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              GV PD +T++T+++ +     M K   + + M   G++PD+  ++++  G+ R G  
Sbjct: 562 ISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRM 621

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Q+AE IL  M + G+ P+   +TT+I+G+ +   ++ A   +++M + G  P+
Sbjct: 622 QEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 199/401 (49%), Gaps = 18/401 (4%)

Query: 34  TLVAALTRQK---RFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           TL+  + R+    R + + SLIS     G+  D+++F+ +I +  ++  ++E    F+ +
Sbjct: 84  TLILRMIRRSGVSRVEIVESLISMSSTCGV--DNLVFDLLIRSYVQARKLNEGTDTFKIL 141

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
           +  G   + +  N+L+ G   +G  + + ++   +++   ++ N  T NI+V A C  + 
Sbjct: 142 RRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIAR-SGIELNVYTLNIMVNALCKDHK 200

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           I++    +  M   GI  D VTYNTL  AY + G    A +++  M    ++P   T   
Sbjct: 201 IDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNA 260

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI------KGFLDIKDSDGVDKALT 264
           +++G CK+G    A      M  + + P+   +N+L+        FL+ KD        +
Sbjct: 261 VINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKD------IFS 314

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M   GV PD+++FS+++   S  G + +    F DM  +G+ PD  +++IL  GY R G
Sbjct: 315 DMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNG 374

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              +A  I   M + G   +VV + T+++G C    +  A +++++M E G+ P+  T+ 
Sbjct: 375 MMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFT 434

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           TL+ G+ +     +A  L  +M +K ++P   T  ++ D +
Sbjct: 435 TLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGF 475



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/305 (18%), Positives = 129/305 (42%)

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           D + ++ L R+Y Q  +          ++      +   C  ++ G  K G ++ A    
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
             +    +  N+   N ++         D V   L  ME+ G+  D+VT++T+++A+   
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
           GL+G+  E+ + M   G++P +  ++ +  G  + G   +A+ +   M   G+ P+   +
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTY 293

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
            T++   C       A  I+  M   G++P+L ++ +L+          +A    + M+ 
Sbjct: 294 NTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKT 353

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSA 468
            G+ P      ++ + +   G+  EA  +     E   ++        +  + +K+ L+ 
Sbjct: 354 SGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLAD 413

Query: 469 SNSTF 473
           +N+ F
Sbjct: 414 ANALF 418



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 1/194 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A+ ++N +I     P  I+Y  LV              L  ++ + G+KP  +  N +I
Sbjct: 483 KANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVI 542

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                SG++ +A +   KM   G  P + TYNTLI G+      +++  L+  M + K +
Sbjct: 543 KGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKM-ETKGL 601

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +P+  TYN+++  +C +  ++EA  ++ KM+  GI PD  TY TL   Y        A +
Sbjct: 602 QPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFR 661

Query: 192 MLFEMQNNQVRPNE 205
              EM      P++
Sbjct: 662 FHDEMLQRGFVPDD 675



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 62/128 (48%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A      +I EG  P  ITY TL+    + +       LI+K+E  G++PD + +
Sbjct: 549 GDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTY 608

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++N     G + EA  I +KM + G  P  STY TLI GY +    +E+ +    M Q
Sbjct: 609 NVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQ 668

Query: 128 DKNVKPND 135
              V  +D
Sbjct: 669 RGFVPDDD 676


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 199/419 (47%), Gaps = 4/419 (0%)

Query: 2   NILVGKGKPHE---AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           ++++G  + H+   A  +FN + +EG  P  +TY+TL+  L    R      LI ++   
Sbjct: 255 SMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILH 314

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+ P +      I A  + G  ++A ++F  MK+ GC+P   TY  LI G    G  + +
Sbjct: 315 GILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVA 374

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           + L   MS+D  V PN  TYN L+        I+ A+ V+  M  +G  P+ VTYN + +
Sbjct: 375 IGLFHRMSRD-GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIK 433

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            Y   G+  +A  ++  M       N  T   I+ GYC  GN   A+R L  M++    P
Sbjct: 434 GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 493

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           +   +  LI GF  I   +        M + G+ P+ VT++ ++D +     +     + 
Sbjct: 494 DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 553

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           + M ++G  P++  +++L  G  +      AE +   M + G+ PNVV +T +I G C  
Sbjct: 554 EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 613

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
                A+ ++ KM E G  PNL TY +L+   G+  +   AE L   +E  G+ P + T
Sbjct: 614 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEIT 672



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 206/406 (50%), Gaps = 1/406 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
             + L + G R  L  Y+ L+  L+R     +++    ++  +G++P+ +++NA+INA  
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + GNV +A  I +K+ +S   P T TY ++I G+      + +L++   M+++   +PN 
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE-GCEPNT 285

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY+ L+   C    + EA++++ +M+  GI P A T      A    G    A ++  +
Sbjct: 286 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 345

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M+N    PN  T   ++SG C  G ++ A+   +RM    V PN V +N+LI   ++ + 
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
                  L LM   G  P++VT++ ++  +   G   K   + ++M++ G   ++  ++ 
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           + KGY  +G    A  IL  MR  G  P+   +T +I G+C   KM+ A  ++ +M + G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           + PN  TY  L+ GY + ++   A  LL+ M+  G RP   T  ++
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 196/386 (50%), Gaps = 1/386 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   +A  +F  +  +G  P + TYT L++ L      K  + L  ++ +DG+ P+
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ +NA+IN   E+  +  A  +   M  +GC P   TYN +IKGY  +G P++++ ++ 
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M Q +    N  TYN +++ +C   +   A  ++  M   G +PD  +Y  L   + + 
Sbjct: 450 NMLQ-RGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKI 508

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +   A  +  EM ++ + PNE T   ++ GYCK+  ++ A   L  MK     PN+  +
Sbjct: 509 SKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTY 568

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N LI G     +  G ++   +M E G+ P+VVT++ ++D     G      E+F+ M++
Sbjct: 569 NVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIE 628

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G  P++  +S L +   + G+ ++AE++   + ++G+ P+ + +  +I  +  + K++ 
Sbjct: 629 QGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEH 688

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWG 389
           A +   +M + G  P L TY  L+ G
Sbjct: 689 AFNFLGRMIKAGCQPTLWTYGVLIKG 714



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 109/463 (23%), Positives = 186/463 (40%), Gaps = 38/463 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A  I + + + G +P   +YT L+    +  + +S   L +++  DG+ P+ + +
Sbjct: 474 GNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTY 533

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQL 124
            A+I+   +   +D A  + + MK SGC+P   TYN LI G     N    EE  K++  
Sbjct: 534 TALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI- 592

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
              ++ + PN  TY  ++   C   S   A  +  KM+  G  P+ +TY++L RA  Q G
Sbjct: 593 ---EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEG 649

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +   AE +  E++ + + P+E T   ++  Y   G +E A  FL RM +    P L  + 
Sbjct: 650 KVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYG 709

Query: 245 SLIKGF------------------------LDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
            LIKG                             D D V      + E      V   + 
Sbjct: 710 VLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNA 769

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++   S+AG   +  E+   M+  G+ PD   ++ L    +R      A  +   M   G
Sbjct: 770 LVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQG 829

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
              ++  +  +I   C   + + A   +E M     NP+      L+ G           
Sbjct: 830 CEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCM 889

Query: 401 ELLQVMEEKGVRPKKSTIQLVA------DSWRAI-GLAREAKR 436
           E L +ME +   P      ++A       SW+ + G   + KR
Sbjct: 890 EFLHIMETRRYMPSFHIYTILAREASKKRSWKHVAGCITKVKR 932



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 138/300 (46%)

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+++  SK ++    + +  +  SG++     Y+ L    ++ G T         M +  
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           V+PN      +++  CK+GN+ DA   + ++ E E+ P+   + S+I G     D D   
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           +    M + G +P+ VT+ST+++    +G + +  ++  +M+  GI P  H  +      
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
              G  + A  +   M+  G  PNV  +T +ISG C +  ++ A+ ++ +M   G+ PN 
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 390

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            TY  L+    E ++   A  +L +M   G  P   T   +   +  +G  ++A  V+ +
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNN 450



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 158/381 (41%), Gaps = 33/381 (8%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G    A  +FN +IE+G  P L+TY++L+ AL ++ + +   +L +++E+ G+ PD
Sbjct: 610 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 669

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I +  MI A   SG V+ A     +M  +GC+PT  TY  LIKG  N     E L   Q
Sbjct: 670 EITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN-----EYLLADQ 724

Query: 124 LMSQDKNVKPNDRTYNILVRAWCS---KNSIEEAWNVVYKMVASGIQP--DAVTYNTLAR 178
            ++   +V PN           CS   + + ++A +V+   +A  + P       N L  
Sbjct: 725 RLAALPDVVPN-----------CSFGYQTTDQDAVSVMSAKLAE-LDPGLSVQVQNALVS 772

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM--KELEV 236
             +  G  + A ++L  M +  + P++     ++    +  N++ AM     M  +  EV
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEV 832

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           H N   +  LI     +            M      PD V  + ++D     G    C E
Sbjct: 833 HLN--GYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCME 890

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
               M      P  H+++ILA+   +    +     +T +++          +T  +G C
Sbjct: 891 FLHIMETRRYMPSFHIYTILAREASKKRSWKHVAGCITKVKR-------ATCSTSCTGQC 943

Query: 357 NAVKMQRAMSIYEKMCEIGIN 377
               + R   +Y    EI  N
Sbjct: 944 FCSSLSRLYYLYPIKIEILAN 964


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 217/440 (49%), Gaps = 1/440 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G+  + + +F  +I+ G  P ++TYTT++  L + + F     +  ++  +G 
Sbjct: 206 INGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGF 265

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP++  +N +I+     G   E +++ ++M   G KP   TY +L+      G+  E+  
Sbjct: 266 KPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARF 325

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M + K +KP   TY IL+  + +K ++ E  + +  MV +G+ PD   +N    AY
Sbjct: 326 FFDSMIR-KGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAY 384

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+ G   +A  +  +M+ + + PN    G ++   CK G ++DA     +M    V PN+
Sbjct: 385 AKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNI 444

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           VVFNSL+ G   +   +  ++ +  M + G+ P+ V F+T++    + G + + + + D 
Sbjct: 445 VVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDL 504

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G+ PD   ++ L  GY   G   +AE +   M   G+ P  V + T++ G+C+A +
Sbjct: 505 MEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 564

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ +M   G+ P + TY T+L G  + K+   A+EL   M   G +    T  +
Sbjct: 565 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 624

Query: 421 VADSWRAIGLAREAKRVLKS 440
           + +         EA ++ +S
Sbjct: 625 ILNGLCKSNCVDEAFKMFQS 644



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 207/423 (48%), Gaps = 9/423 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EA + F+ +I +G +P + TY  L+     +     + S +  + ++G+
Sbjct: 311 LNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGL 370

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES-L 119
            PD  +FN   +A ++ G +D+AM IF KM+  G  P    Y  LI     +G+ +++ +
Sbjct: 371 SPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEV 430

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K  Q++++   V PN   +N LV   C+ +  E A  +VY+M+  GI P+AV +NTL   
Sbjct: 431 KFNQMINE--GVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICN 488

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
               G      +++  M++  VRP+  +   ++SGYC  G  ++A +    M  + + P 
Sbjct: 489 LCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPT 548

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            V +N+L+ G+     +  +D A  L  E    GV P VVT++TI+          + +E
Sbjct: 549 EVTYNTLLHGYCS---ASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKE 605

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           ++ +M+ +G + DI+ ++I+  G  ++    +A  +  S+   G+  N++ FT +I    
Sbjct: 606 LYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALL 665

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
              + + AM ++  +   G+ PN+ TY  +     E       + L   ME+ G  P   
Sbjct: 666 KGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQ 725

Query: 417 TIQ 419
            + 
Sbjct: 726 MLN 728



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 193/455 (42%), Gaps = 73/455 (16%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P L TY+ L+    R    +   +    + K G + D I  N ++        V EAM +
Sbjct: 88  PNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDV 147

Query: 87  F-QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD--KNVKPNDRTYNILVR 143
             Q+M + GC P T +Y  L+KG  N  + EE+L+LL +M+ D  +   PN  +Y+I++ 
Sbjct: 148 LLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVIN 207

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            + ++  +++ +N+  +M+  GI PD VTY T                            
Sbjct: 208 GFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTT---------------------------- 239

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
                  ++ G CK    + A     +M +    PN   +N LI G+L I     V + L
Sbjct: 240 -------VIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQML 292

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE---------------- 307
             M   G+KPD  T+ ++++     G   + +  FD M++ GI+                
Sbjct: 293 EEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATK 352

Query: 308 -------------------PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
                              PD H+F+I    Y + G   KA  I   MR++G+ PNVV +
Sbjct: 353 GALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNY 412

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
             +I   C   ++  A   + +M   G+ PN+  + +L++G     +  RAEEL+  M +
Sbjct: 413 GALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLD 472

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           +G+ P       +  +   +G   E +R++   E 
Sbjct: 473 QGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEH 507



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/487 (21%), Positives = 210/487 (43%), Gaps = 39/487 (8%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F  +I+ G +P   TY  L+       ++K ++ ++ ++   G+KPD   + +++N
Sbjct: 253 AEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLN 312

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              ++G   EA   F  M   G KP  STY  LI GY   G   E    L LM ++  + 
Sbjct: 313 YLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVEN-GLS 371

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET------ 186
           P+   +NI   A+     I++A ++  KM   G+ P+ V Y  L  A  + G        
Sbjct: 372 PDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVK 431

Query: 187 -----------------------------YRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
                                         RAE++++EM +  + PN      ++   C 
Sbjct: 432 FNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCN 491

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
            G + +  R +  M+ + V P+   +  LI G+     +D  +K    M   G+ P  VT
Sbjct: 492 VGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVT 551

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           ++T++  + SA  +     +F +M++ G+ P +  ++ +  G  +     +A+ +  +M 
Sbjct: 552 YNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMI 611

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
             G   ++  +  +++G C +  +  A  +++ +C  G+  N+ T+  ++    +  +  
Sbjct: 612 NSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKE 671

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK--DEI 455
            A +L   +   G+ P   T +LVA++    G   E   +  SA E   + PN +  + +
Sbjct: 672 DAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLF-SAMEKNGTAPNSQMLNAL 730

Query: 456 AVESIHR 462
               +HR
Sbjct: 731 VRRLLHR 737



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 159/336 (47%), Gaps = 1/336 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  +A   FN +I EG  P ++ + +LV  L    +++    L+ ++   G+
Sbjct: 416 IDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGI 475

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+++ FN +I      G V E  ++   M+  G +P   +Y  LI GY   G+ +E+ K
Sbjct: 476 CPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEK 535

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M     + P + TYN L+  +CS + I++A+ +  +M+  G+ P  VTYNT+    
Sbjct: 536 VFDGMVS-IGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGL 594

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q      A+++   M N+  + +  T  II++G CK   +++A +    +    +  N+
Sbjct: 595 FQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNI 654

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + F  +I   L     +        +   G+ P+VVT+  + +     G + +   +F  
Sbjct: 655 ITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSA 714

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           M K G  P+  + + L +  +  G+  +A + L+ +
Sbjct: 715 MEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKL 750



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/414 (22%), Positives = 174/414 (42%), Gaps = 36/414 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  IFN + + G  P ++ Y  L+ AL +  R        +++  +G+ P+ ++F
Sbjct: 388 GMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVF 447

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N+++         + A ++  +M D G  P    +NTLI    NVG+  E  +L+ LM +
Sbjct: 448 NSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLM-E 506

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              V+P+  +Y  L+  +C     +EA  V   MV+ G+ P  VTYNTL           
Sbjct: 507 HVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTL----------- 555

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
                                   + GYC    ++DA      M    V P +V +N+++
Sbjct: 556 ------------------------LHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTIL 591

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G    K      +    M   G K D+ T++ I++    +  + +  ++F  +   G++
Sbjct: 592 HGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQ 651

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
            +I  F+I+    ++ G  + A  +  ++   G+ PNVV +  V         ++   S+
Sbjct: 652 LNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSL 711

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           +  M + G  PN +    L+          RA   L  ++E+    + ST  L+
Sbjct: 712 FSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLL 765



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 90/389 (23%), Positives = 171/389 (43%), Gaps = 18/389 (4%)

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNV---GKPEESLKLLQLMSQD--K 129
           S S  +D+A+K+F ++       +   +N L+            E ++     M ++   
Sbjct: 25  SRSLGLDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSD 84

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
            V PN  TY+IL+  +C    +E  +     ++ +G + D +  N L +          A
Sbjct: 85  KVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEA 144

Query: 190 EQMLFE-MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE---LEVHPNLVVFNS 245
             +L + M      P+  +  I++ G C E   E+A+  L+ M +       PN+V ++ 
Sbjct: 145 MDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSI 204

Query: 246 LIKGFLDIKDSDG-VDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
           +I GF     ++G VDK   L  E    G+ PDVVT++T++D    A L  + + +F  M
Sbjct: 205 VINGFF----TEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQM 260

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           +  G +P+ + ++ L  GY+  G+ ++   +L  M   G+ P+   + ++++  C   + 
Sbjct: 261 IDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRC 320

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           + A   ++ M   GI P + TY  L+ GY            L +M E G+ P      + 
Sbjct: 321 REARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIF 380

Query: 422 ADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
             ++   G+  +A  +     +   S PN
Sbjct: 381 FSAYAKCGMIDKAMDIFNKMRQHGLS-PN 408



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 36/303 (11%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++++G  P  + + TL+  L    R      LI  +E  G++PD+  +  +I+    +G 
Sbjct: 470 MLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGR 529

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP------ 133
            DEA K+F  M   G  PT  TYNTL+ GY +  + +++  L + M + K V P      
Sbjct: 530 TDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLR-KGVTPGVVTYN 588

Query: 134 -----------------------------NDRTYNILVRAWCSKNSIEEAWNVVYKMVAS 164
                                        +  TYNI++   C  N ++EA+ +   + + 
Sbjct: 589 TILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSK 648

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           G+Q + +T+  +  A  + G    A  +   +  N + PN  T  ++     +EG++E+ 
Sbjct: 649 GLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEF 708

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
                 M++    PN  + N+L++  L   D       L+ ++E     +  T S +M  
Sbjct: 709 DSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSI 768

Query: 285 WSS 287
           ++S
Sbjct: 769 FTS 771


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 216/469 (46%), Gaps = 42/469 (8%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSL------------------------- 51
           FN ++     P+++ +  L +AL R K +K+++SL                         
Sbjct: 79  FNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCR 138

Query: 52  ----------ISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTST 101
                     + K+ K G++P+ I F+ +IN     G +  A+++F  M   G KP   +
Sbjct: 139 LCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHS 198

Query: 102 YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
           Y+ +IKG   VGK  E +KLL+ M +    +P+   YN +V   C    + EA ++  KM
Sbjct: 199 YSIIIKGLCRVGKTTEVIKLLEHM-KVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKM 257

Query: 162 VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM 221
             +GI P  VTY +L       G    A  +L EM+   + P+     +++   CKEG +
Sbjct: 258 KGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEV 317

Query: 222 EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
            +A   L  M E+ V P++  +N+L+ G+    +     K   +M   G  PDV +FS +
Sbjct: 318 SEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSIL 377

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           ++ +  A  + + +++FD+M   G+ PD   ++ L  G  +A  P +AE +   M   G 
Sbjct: 378 VNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGY 437

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG---YGEAKQPWR 398
            PN+V ++ ++        + +AM ++  M   G+ P+L TY  ++ G   YG+ K    
Sbjct: 438 PPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKD--- 494

Query: 399 AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS 447
           A EL   +  KG++P         D     GL  EA +  +  E+D  S
Sbjct: 495 ARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCS 543



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 187/365 (51%), Gaps = 1/365 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK   A  +F+ ++  G++P + +Y+ ++  L R  +   ++ L+  ++  G +PD ++
Sbjct: 174 EGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVI 233

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +++   +   V+EA+ IF KMK +G  PT  TY +LI G  N+G+ +E+  LL  M 
Sbjct: 234 YNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEM- 292

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +  N+ P+   +++L+   C +  + EA  ++  M   G++PD  TYNTL   Y    E 
Sbjct: 293 KGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEV 352

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++   M +    P+  +  I+V+GYCK   +++A +    M    + P+ V +N+L
Sbjct: 353 VEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTL 412

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G    +     ++    M   G  P++VT+S ++D  S  G + +   +F  M  +G+
Sbjct: 413 ISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGL 472

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           +PD+  ++I+  G  + G+ + A  +   +   G+ PN  + T  I G C    +  A  
Sbjct: 473 KPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHK 532

Query: 367 IYEKM 371
            + +M
Sbjct: 533 AFRQM 537



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 36/298 (12%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           +EA +IF  +   G  PT++TYT+L+  L    R+K    L+++++   + PD + F+ +
Sbjct: 248 NEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVL 307

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           I+   + G V EA  I + M + G +P  +TYNTL+ GY    +  E+ K+ ++M   K 
Sbjct: 308 IDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMIS-KG 366

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
             P+  +++ILV  +C    I+EA  +  +M   G+ PD V+YNTL     Q      AE
Sbjct: 367 RMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAE 426

Query: 191 QM----------------------------------LFE-MQNNQVRPNERTCGIIVSGY 215
           ++                                  LF  M+N+ ++P+  T  I++ G 
Sbjct: 427 ELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGM 486

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
           CK G  +DA      +    + PN  V    I G       D   KA   ME+    P
Sbjct: 487 CKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 117/238 (49%), Gaps = 1/238 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++I+  +G+  EA  I   + E G  P + TY TL+     +        +   +   G 
Sbjct: 308 IDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGR 367

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   F+ ++N   ++  +DEA ++F +M   G  P T +YNTLI G     +P E+ +
Sbjct: 368 MPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEE 427

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M  +    PN  TY+IL+     +  +++A  +   M  SG++PD VTYN +    
Sbjct: 428 LFKDMHSN-GYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGM 486

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            +YG+   A ++  E+    ++PN   C   + G CK G +++A +   +M++ +  P
Sbjct: 487 CKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 52/103 (50%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G   +A  +F  +   G +P L+TY  ++  + +  +FK    L +++   G+
Sbjct: 448 LDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGL 507

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYN 103
           +P++ +    I+   + G +DEA K F++M+   C P     N
Sbjct: 508 QPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGCIN 550


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/531 (24%), Positives = 249/531 (46%), Gaps = 25/531 (4%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           ++  +G   +A  +F+ +I  G  P    Y +L+    R+K  +    L+ +++K  +  
Sbjct: 359 VMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVI 418

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
               +   +     SG++D A  I ++M  SGC+P    Y TLIK +    +  +++++L
Sbjct: 419 SPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVL 478

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           + M +++ + P+   YN L+        ++EA + + +MV +G +PDA TY      Y +
Sbjct: 479 KEM-REQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIE 537

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            GE   A++ + EM    V PN+  C  +++ YCK+G + +A      M E  +  +   
Sbjct: 538 AGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKT 597

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +  L+ G +     +  ++    M   G+ PDV ++ T++D +S  G M K   IFD+MV
Sbjct: 598 YTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMV 657

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           +AG+  ++ ++++L  G+ R+GE +KA+ +L  M   G  PN V + T+I G+C +  + 
Sbjct: 658 QAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLA 717

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A  ++++M   G+ P+   Y TL+ G        RA  + +   EKG     +    + 
Sbjct: 718 EAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFET-NEKGCASSSAPFNALI 776

Query: 423 DSWRAIG---LAREAKRVLKSAEEDRQSMPNKKD-EIAVESIHRKQNLSASNSTFLQ--- 475
           +     G   L  +    L     D+   PN     I ++ + ++ NL A+   F     
Sbjct: 777 NWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQK 836

Query: 476 ---IPGVV--SSEHNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQP 521
              +P V+  +S  NG      RS++            S+F     +G++P
Sbjct: 837 ANLMPTVITYTSLLNGYDKMGRRSEMF-----------SVFDEVIAAGIEP 876



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 198/405 (48%), Gaps = 1/405 (0%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           + Y+ L+  L + +   +   L+ ++   G   D ++++  I   S+ G +++A  +F  
Sbjct: 316 VAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDG 375

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M   G  P    Y +LI+G+       +  +LL  + + +N+  +  TY   V+  CS  
Sbjct: 376 MITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKK-RNIVISPYTYGTAVKGMCSSG 434

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            ++ A+N+V +M ASG +P+ V Y TL + + Q      A ++L EM+   + P+     
Sbjct: 435 DLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYN 494

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            ++ G  K   M++A  FL  M E    P+   + + I G+++  +    DK +  M E 
Sbjct: 495 SLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLEC 554

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           GV P+ V  + +++ +   G + +    F  MV+ GI  D   +++L  G V+ G+   A
Sbjct: 555 GVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDA 614

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           E I   MR  G+ P+V  + T+I G+     MQ+A SI+++M + G+  N+  Y  LL G
Sbjct: 615 EEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGG 674

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           +  + +  +A+ELL  M  KG  P   T   + D +   G   EA
Sbjct: 675 FCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEA 719



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 185/404 (45%), Gaps = 1/404 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G     + Y   +  ++++   +   +L   +   G+ P +  + ++I       N
Sbjct: 341 MVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKN 400

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V +  ++  ++K      +  TY T +KG  + G  + +  +++ M      +PN   Y 
Sbjct: 401 VRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGA-SGCRPNVVIYT 459

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L++ +  K+   +A  V+ +M   GI PD   YN+L    ++  +   A   L EM  N
Sbjct: 460 TLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVEN 519

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
             +P+  T G  +SGY + G    A +++  M E  V PN V+   LI  +         
Sbjct: 520 GFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEA 579

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
             A   M E G+  D  T++ +M+     G +   +EIF +M   GI PD+  +  L  G
Sbjct: 580 CSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDG 639

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           + + G  QKA SI   M + G+  NV+++  ++ G+C + ++++A  + ++M   G  PN
Sbjct: 640 FSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPN 699

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
             TY T++ GY ++     A +L   M+ KG+ P       + D
Sbjct: 700 AVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVD 743



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 106/464 (22%), Positives = 208/464 (44%), Gaps = 53/464 (11%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA      ++E G +P   TY   ++       F S    + ++ + G+ P+ +L  
Sbjct: 505 KMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCT 564

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +IN   + G V EA   F+ M + G      TY  L+ G    GK  ++ ++   M + 
Sbjct: 565 GLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEM-RG 623

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K + P+  +Y  L+  +    ++++A ++  +MV +G+  + + YN L   + + GE  +
Sbjct: 624 KGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEK 683

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A+++L EM      PN  T   I+ GYCK G++ +A +    MK   + P+  V+ +L+ 
Sbjct: 684 AKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVD 743

Query: 249 GFLDIKDSDGVDKALTLME----------------------------------------- 267
           G   + D   V++A+T+ E                                         
Sbjct: 744 GCCRLND---VERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSF 800

Query: 268 -EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            +FG KP+ VT++ ++D     G +   +E+F  M KA + P +  ++ L  GY + G  
Sbjct: 801 DKFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRR 859

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM-----CEIGINPNLK 381
            +  S+   +   G+ P+ +M++ +I+ +       +A+ + ++M      + G   ++ 
Sbjct: 860 SEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSIS 919

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST-IQLVADS 424
           T   LL G+ +  +   AE++++ M      P  ST I+L+ +S
Sbjct: 920 TCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINES 963



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 177/395 (44%), Gaps = 36/395 (9%)

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
           NVDEA+++ + M   G  P+  +YN LI G     + E++  LL  M+    +  ++  Y
Sbjct: 260 NVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNS-VGLFADNVAY 318

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL---------------------- 176
           +IL+       + + A  +V++MV+ G   D + Y+                        
Sbjct: 319 SILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMIT 378

Query: 177 ------ARAYAQYGETYRAE-------QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED 223
                 ARAYA   E +  E       ++L E++   +  +  T G  V G C  G+++ 
Sbjct: 379 FGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDG 438

Query: 224 AMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD 283
           A   +  M      PN+V++ +LIK FL         + L  M E G+ PD   +++++ 
Sbjct: 439 AYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLII 498

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
             S A  M + +    +MV+ G +PD   +     GY+ AGE   A+  +  M + GV P
Sbjct: 499 GLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIP 558

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           N V+ T +I+ +C   K+  A S +  M E GI  + KTY  L+ G  +  +   AEE+ 
Sbjct: 559 NKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIF 618

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             M  KG+ P   +   + D +  +G  ++A  + 
Sbjct: 619 HEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIF 653



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 169/365 (46%), Gaps = 11/365 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN LV  GK ++A  IF+ +  +G  P + +Y TL+   ++    +   S+  ++ + G+
Sbjct: 602 MNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGL 661

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             + I++N ++     SG +++A ++  +M   G  P   TY T+I GY   G   E+ +
Sbjct: 662 TSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQ 721

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M   K + P+   Y  LV   C  N +E A   +++    G    +  +N L    
Sbjct: 722 LFDEMKL-KGLVPDSFVYTTLVDGCCRLNDVERAIT-IFETNEKGCASSSAPFNALINWV 779

Query: 181 AQYGETYRAEQMLFEMQNNQV----RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
            ++G+T     M+  + +       +PN+ T  I++   CKEGN+E A    + M++  +
Sbjct: 780 FKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANL 839

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P ++ + SL+ G+  +     +      +   G++PD + +S I++A+   G+  K   
Sbjct: 840 MPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALV 899

Query: 297 IFDDM-----VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
           + D M     V  G +  I     L  G+ + GE + AE ++ +M +    P+      +
Sbjct: 900 LLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIEL 959

Query: 352 ISGWC 356
           I+  C
Sbjct: 960 INESC 964



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/351 (22%), Positives = 160/351 (45%), Gaps = 17/351 (4%)

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCK--PTTSTYNTLIKGYGNVGKPEESLKLL 122
           +LF  +I+   E G +DEA+ +F   KD      P+ +  N L+       + +    + 
Sbjct: 153 LLFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVY 212

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           + M + +NV  + ++Y +L+ A C   +++ A +V+ K           T   L  A   
Sbjct: 213 KGMVE-RNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLK-----------TEEELGTATLN 260

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
             E    ++    M    + P+ ++  +++ G CK+  +EDA   L  M  + +  + V 
Sbjct: 261 VDEALELKK---SMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVA 317

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           ++ LI G L  +++D  +  +  M   G   D + +   +   S  G M K + +FD M+
Sbjct: 318 YSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMI 377

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G+ P    ++ L +G+ R    +K   +L  ++K  +  +   + T + G C++  + 
Sbjct: 378 TFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLD 437

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            A +I ++M   G  PN+  Y TL+  + +  +   A  +L+ M E+G+ P
Sbjct: 438 GAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAP 488


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 199/419 (47%), Gaps = 4/419 (0%)

Query: 2   NILVGKGKPHE---AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           ++++G  + H+   A  +FN + +EG  P  +TY+TL+  L    R      LI ++   
Sbjct: 255 SMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILH 314

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+ P +      I A  + G  ++A ++F  MK+ GC+P   TY  LI G    G  + +
Sbjct: 315 GILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVA 374

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           + L   MS+D  V PN  TYN L+        I+ A+ V+  M  +G  P+ VTYN + +
Sbjct: 375 IGLFHRMSRD-GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIK 433

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            Y   G+  +A  ++  M       N  T   I+ GYC  GN   A+R L  M++    P
Sbjct: 434 GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 493

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           +   +  LI GF  I   +        M + G+ P+ VT++ ++D +     +     + 
Sbjct: 494 DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 553

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           + M ++G  P++  +++L  G  +      AE +   M + G+ PNVV +T +I G C  
Sbjct: 554 EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 613

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
                A+ ++ KM E G  PNL TY +L+   G+  +   AE L   +E  G+ P + T
Sbjct: 614 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEIT 672



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 206/406 (50%), Gaps = 1/406 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
             + L + G R  L  Y+ L+  L+R     +++    ++  +G++P+ +++NA+INA  
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + GNV +A  I +K+ +S   P T TY ++I G+      + +L++   M+++   +PN 
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE-GCEPNT 285

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY+ L+   C    + EA++++ +M+  GI P A T      A    G    A ++  +
Sbjct: 286 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 345

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M+N    PN  T   ++SG C  G ++ A+   +RM    V PN V +N+LI   ++ + 
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
                  L LM   G  P++VT++ ++  +   G   K   + ++M++ G   ++  ++ 
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           + KGY  +G    A  IL  MR  G  P+   +T +I G+C   KM+ A  ++ +M + G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           + PN  TY  L+ GY + ++   A  LL+ M+  G RP   T  ++
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 196/386 (50%), Gaps = 1/386 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   +A  +F  +  +G  P + TYT L++ L      K  + L  ++ +DG+ P+
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ +NA+IN   E+  +  A  +   M  +GC P   TYN +IKGY  +G P++++ ++ 
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M Q +    N  TYN +++ +C   +   A  ++  M   G +PD  +Y  L   + + 
Sbjct: 450 NMLQ-RGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKI 508

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +   A  +  EM ++ + PNE T   ++ GYCK+  ++ A   L  MK     PN+  +
Sbjct: 509 SKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTY 568

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N LI G     +  G ++   +M E G+ P+VVT++ ++D     G      E+F+ M++
Sbjct: 569 NVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIE 628

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G  P++  +S L +   + G+ ++AE++   + ++G+ P+ + +  +I  +  + K++ 
Sbjct: 629 QGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEH 688

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWG 389
           A +   +M + G  P L TY  L+ G
Sbjct: 689 AFNFLGRMIKAGCQPTLWTYGVLIKG 714



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/442 (23%), Positives = 178/442 (40%), Gaps = 31/442 (7%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A  I + + + G +P   +YT L+    +  + +S   L +++  DG+ P+ + +
Sbjct: 474 GNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTY 533

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQL 124
            A+I+   +   +D A  + + MK SGC+P   TYN LI G     N    EE  K++  
Sbjct: 534 TALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI- 592

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
              ++ + PN  TY  ++   C   S   A  +  KM+  G  P+ +TY++L RA  Q G
Sbjct: 593 ---EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEG 649

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +   AE +  E++ + + P+E T   ++  Y   G +E A  FL RM +    P L  + 
Sbjct: 650 KVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYG 709

Query: 245 SLIKGF------------------------LDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
            LIKG                             D D V      + E      V   + 
Sbjct: 710 VLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNA 769

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++   S+AG   +  E+   M+  G+ PD   ++ L    +R      A  +   M   G
Sbjct: 770 LVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQG 829

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
              ++  +  +I   C   + + A   +E M     NP+      L+ G           
Sbjct: 830 CEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCM 889

Query: 401 ELLQVMEEKGVRPKKSTIQLVA 422
           E L +ME +   P      ++A
Sbjct: 890 EFLHIMETRRYMPSFHIYTILA 911



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 138/300 (46%)

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+++  SK ++    + +  +  SG++     Y+ L    ++ G T         M +  
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           V+PN      +++  CK+GN+ DA   + ++ E E+ P+   + S+I G     D D   
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           +    M + G +P+ VT+ST+++    +G + +  ++  +M+  GI P  H  +      
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
              G  + A  +   M+  G  PNV  +T +ISG C +  ++ A+ ++ +M   G+ PN 
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 390

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            TY  L+    E ++   A  +L +M   G  P   T   +   +  +G  ++A  V+ +
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNN 450



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 139/322 (43%), Gaps = 26/322 (8%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G    A  +FN +IE+G  P L+TY++L+ AL ++ + +   +L +++E+ G+ PD
Sbjct: 610 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 669

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I +  MI A   SG V+ A     +M  +GC+PT  TY  LIKG  N     E L   Q
Sbjct: 670 EITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN-----EYLLADQ 724

Query: 124 LMSQDKNVKPNDRTYNILVRAWCS---KNSIEEAWNVVYKMVASGIQP--DAVTYNTLAR 178
            ++   +V PN           CS   + + ++A +V+   +A  + P       N L  
Sbjct: 725 RLAALPDVVPN-----------CSFGYQTTDQDAVSVMSAKLAE-LDPGLSVQVQNALVS 772

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM--KELEV 236
             +  G  + A ++L  M +  + P++     ++    +  N++ AM     M  +  EV
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEV 832

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           H N   +  LI     +            M      PD V  + ++D     G    C E
Sbjct: 833 HLN--GYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCME 890

Query: 297 IFDDMVKAGIEPDIHVFSILAK 318
               M      P  H+++ILA+
Sbjct: 891 FLHIMETRRYMPSFHIYTILAR 912


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 223/456 (48%), Gaps = 40/456 (8%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILS-LISKVEKDGMKPDSILF 67
           +P     +F C++  G +   IT  TL+  L    R +  ++ L+ ++ + G  P+++ +
Sbjct: 172 RPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSY 231

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSG--CKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
           + ++ A  ++     A+ + Q M   G  C P    Y+T+I G+ N G+  ++  L   M
Sbjct: 232 SIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEM 291

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           ++ + VKP+  TYN+++ A C   ++++A  V+ +M   G QPD VTY+ +   YA  G 
Sbjct: 292 TR-QGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGR 350

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A +M  EM+   + PN  TC   ++  CK G  ++A  F   M      P++  + +
Sbjct: 351 LKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCT 410

Query: 246 LIKGF------------LDIKDSDG--------------------VDKAL---TLMEEFG 270
           L+ G+             +   S+G                    VD A+   T M++ G
Sbjct: 411 LLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQG 470

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           V PDVVT+ST++  +S  G +    E F+ MV  GI+P+  V+S + +G+   G   KA+
Sbjct: 471 VSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAK 530

Query: 331 SILTSMRKYGV-HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
            +++ M   G+  P++V F++VI+  C   ++  A  I++   +IG  P + T+ +L+ G
Sbjct: 531 ELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDG 590

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           Y    +  +A ++L  ME  GV P   T   + D +
Sbjct: 591 YCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGY 626



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 211/442 (47%), Gaps = 8/442 (1%)

Query: 10  PHEAHYIFN--CLIEEGHR---PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           P  A  +FN  C  E G +   PT  TY  L+    R +R    L+L   + + G+K D 
Sbjct: 133 PALALALFNRVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQ 192

Query: 65  ILFNAMINACSESGNVDEAMKIF-QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           I  N ++     +   +EA+ +   +M + GC P   +Y+ ++K   +    + +L LLQ
Sbjct: 193 ITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQ 252

Query: 124 LMS-QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           +M+ Q     P+   Y+ ++  + ++    +A ++ ++M   G++PD VTYN +  A  +
Sbjct: 253 MMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCK 312

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                +AE +L +M  +  +P+  T   ++ GY   G +++A +    MK+  + PN+V 
Sbjct: 313 ARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVT 372

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
            NS +        S    +    M   G KPD+ ++ T++  ++S G       +F+ M 
Sbjct: 373 CNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMK 432

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             GI  + HVF+IL   Y + G    A  I T M++ GV P+VV ++TVIS +    ++ 
Sbjct: 433 SNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLT 492

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV-RPKKSTIQLV 421
            AM  + +M   GI PN   Y +++ G+       +A+EL+  M  KG+ RP       V
Sbjct: 493 DAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSV 552

Query: 422 ADSWRAIGLAREAKRVLKSAEE 443
            +S    G   +A  +   A +
Sbjct: 553 INSLCKDGRVMDAHDIFDLATD 574



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 203/408 (49%), Gaps = 8/408 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  +A  +F+ +  +G +P ++TY  ++ AL + +       ++ ++  DG +PD++ 
Sbjct: 278 EGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVT 337

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ MI+  +  G + EA K+F++MK  G  P   T N+ +      G+ +E+ +    M+
Sbjct: 338 YSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMT 397

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K  KP+  +Y  L+  + S+    +   +   M ++GI  +   +  L  AYA+ G  
Sbjct: 398 A-KGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMV 456

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A  +  EMQ   V P+  T   ++S + + G + DAM    +M    + PN  V++S+
Sbjct: 457 DDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSI 516

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GV-KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           I+GF       G+ KA  L+ E    G+ +PD+V FS+++++    G +    +IFD   
Sbjct: 517 IQGFC---MHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLAT 573

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G  P +  F+ L  GY   G+  KA  IL +M   GV P++V + T++ G+    ++ 
Sbjct: 574 DIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRIN 633

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
             ++++ +M   G+ PN  TY  +L G   A +   A +    M E G
Sbjct: 634 DGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESG 681



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 101/437 (23%), Positives = 206/437 (47%), Gaps = 2/437 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F  + + G  P ++T  + +A+L +  R K        +   G KPD   +
Sbjct: 349 GRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSY 408

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +++  +  G   + + +F  MK +G       +  LI  Y   G  ++++ +   M Q
Sbjct: 409 CTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEM-Q 467

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + V P+  TY+ ++  +     + +A     +MVA GIQP+   Y+++ + +  +G   
Sbjct: 468 QQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLV 527

Query: 188 RAEQMLFEMQNNQV-RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
           +A++++ EM N  + RP+      +++  CK+G + DA        ++   P ++ FNSL
Sbjct: 528 KAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSL 587

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G+  +   D   K L  ME  GV+PD+VT++T++D +   G +     +F +M + G+
Sbjct: 588 IDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGV 647

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           +P+   + I+  G  RAG    A      M + G    V ++  ++ G C       A+ 
Sbjct: 648 KPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAII 707

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           +++K+  + +  ++    T++    + ++   A+EL   +   G+ P +ST  ++  +  
Sbjct: 708 LFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLL 767

Query: 427 AIGLAREAKRVLKSAEE 443
             G   +A  +  S E+
Sbjct: 768 KDGGVEDANNMFSSMEK 784



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 191/420 (45%), Gaps = 15/420 (3%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSI--------LSLISKV--EKDGMK 61
           +AH++F+ L  +       +    +AAL R     +         L+L ++V  E+ G +
Sbjct: 92  DAHHMFDELFRQATPVPGRSLNGFLAALARATSSSACITDGPALALALFNRVCREEAGTQ 151

Query: 62  ---PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
              P    +N +++ C  +   D  + +F  +  +G K    T NTL+K      + EE+
Sbjct: 152 VAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEA 211

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG--IQPDAVTYNTL 176
           + +L     +    PN  +Y+I+++A C  +  + A +++  M   G    PD V Y+T+
Sbjct: 212 VNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTV 271

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
              +   GET +A  +  EM    V+P+  T  +I+   CK   M+ A   L +M     
Sbjct: 272 IHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGA 331

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P+ V ++ +I G+  +       K    M++ G+ P++VT ++ + +    G   +  E
Sbjct: 332 QPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAE 391

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
            FD M   G +PDI  +  L  GY   G       +  SM+  G+  N  +FT +I  + 
Sbjct: 392 FFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYA 451

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
               +  AM I+ +M + G++P++ TY T++  +    +   A E    M  +G++P  +
Sbjct: 452 KRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTA 511



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/422 (21%), Positives = 182/422 (43%), Gaps = 76/422 (18%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  EA   F+ +  +GH+P + +Y TL+     +  F  ++ L + ++ +G+  +
Sbjct: 380 LCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAAN 439

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGC---------------------------- 95
             +F  +I+A ++ G VD+AM IF +M+  G                             
Sbjct: 440 CHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFN 499

Query: 96  -------KPTTSTYNTLIKGYG----------------NVGKPEESL----KLLQLMSQD 128
                  +P T+ Y+++I+G+                 N G P   +     ++  + +D
Sbjct: 500 QMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKD 559

Query: 129 KNV---------------KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY 173
             V               +P   T+N L+  +C    +++A+ ++  M   G++PD VTY
Sbjct: 560 GRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTY 619

Query: 174 NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
           NTL   Y + G       +  EMQ   V+PN  T GI+++G  + G    A +  + M E
Sbjct: 620 NTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIE 679

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG---VKPDVVTFSTIMDAWSSAGL 290
                 + ++  ++ G      ++  D+A+ L ++ G   VK  +   +T+++A      
Sbjct: 680 SGTTVTVSIYGIILGGLC---RNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQR 736

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
             + +E+F  +  +G+ P+   + ++    ++ G  + A ++ +SM K G+ P   +   
Sbjct: 737 KEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNR 796

Query: 351 VI 352
           +I
Sbjct: 797 II 798



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 119/252 (47%), Gaps = 1/252 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  +AH IF+   + G RP +IT+ +L+       +      ++  +E  G+
Sbjct: 553 INSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGV 612

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD + +N +++   ++G +++ + +F++M+  G KP T TY  ++ G    G+   + K
Sbjct: 613 EPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARK 672

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M +          Y I++   C  N  +EA  +  K+    ++      NT+  A 
Sbjct: 673 KFHEMIES-GTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAM 731

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A+++   +  + + PNE T G+++    K+G +EDA      M++  + P  
Sbjct: 732 YKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGS 791

Query: 241 VVFNSLIKGFLD 252
            + N +I+  L+
Sbjct: 792 RLLNRIIRMLLE 803



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 90/184 (48%), Gaps = 4/184 (2%)

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIF-DDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
           G+K D +T +T++     A    +   +    M + G  P+   +SI+ K        Q+
Sbjct: 187 GLKMDQITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQR 246

Query: 329 AESILTSMRKYG--VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           A  +L  M K G    P+VV ++TVI G+ N  +  +A S++ +M   G+ P++ TY  +
Sbjct: 247 ALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLI 306

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
           +    +A+   +AE +L+ M   G +P   T   +   +  +G  +EA ++ +  ++ R 
Sbjct: 307 IDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKK-RG 365

Query: 447 SMPN 450
            +PN
Sbjct: 366 LIPN 369



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 50/114 (43%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +  EA  +F  +   G  P   TY  ++  L +    +   ++ S +EK G+ P S L N
Sbjct: 736 RKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLN 795

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
            +I    E G + +A     K+         ST + ++  +   GK +E +KLL
Sbjct: 796 RIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLL 849


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 217/431 (50%), Gaps = 6/431 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  +F  + E G +PT+  Y  L+ A+  + RF+ I  + S +++DG +P+   +
Sbjct: 128 GLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTY 187

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++ A  ++  VD A K+  +M + GC+P   +Y T+I     +GK EE+ +L      
Sbjct: 188 NILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL------ 241

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
               +PN   YN L+  +C +  ++E + ++ +MV  GI P+ +TY+T+  + +  G   
Sbjct: 242 SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVE 301

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +  +M      PN  T   ++ GY   G + +A+    RM E    PN+V +N+LI
Sbjct: 302 LALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLI 361

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G              + ME  G  P+V T+  ++D ++ AG +    EI++ M+  G  
Sbjct: 362 HGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCI 421

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P++ V++ +     R+    +A S++  M      PN V F T I G C + +++ A+++
Sbjct: 422 PNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINL 481

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           + +M + G +PN+KTY  +L G  +  +   A EL+  MEEKG+     T   +   +  
Sbjct: 482 FCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCN 541

Query: 428 IGLAREAKRVL 438
           +G   EA ++L
Sbjct: 542 VGKFEEALKLL 552



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 207/451 (45%), Gaps = 41/451 (9%)

Query: 28  TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIF 87
           T +TY  ++  L R+     +  L+ +++ +G+     LF  +IN     G  ++A+K+F
Sbjct: 78  TQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMF 137

Query: 88  QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
            ++++ GC+PT   YN L+    +  + +    +   M +D   +PN  TYNIL++A C 
Sbjct: 138 YRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGK-EPNVYTYNILLKALCK 196

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
            N ++ A  ++ +M   G +PD V+Y T+  + ++ G+   A ++    Q     PN   
Sbjct: 197 NNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQ-----PNVSV 251

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD---------- 257
              +++G+C+E  +++    L +M E  + PN++ ++++I     I + +          
Sbjct: 252 YNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMF 311

Query: 258 ----------------------GVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMG 292
                                  V +AL +   M E G +P+VV ++T++    S G MG
Sbjct: 312 VRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMG 371

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           +   +   M + G  P++  +  L  G+ +AG+   A  I   M   G  PNVV++T+++
Sbjct: 372 EAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMV 431

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
           +  C +    +A S+ EKM      PN  T+ T + G   + +   A  L   ME+ G  
Sbjct: 432 NVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCS 491

Query: 413 PKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           P   T   V D        +EA  ++   EE
Sbjct: 492 PNIKTYNEVLDGLLKENRIKEALELVTEMEE 522



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 186/400 (46%), Gaps = 37/400 (9%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P +  Y  L+    R+ + K +  L+ ++ + G+ P+ I ++ +I++ S  GNV+ A+ 
Sbjct: 246 QPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALA 305

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           ++ KM   GC P   T+ +L+KGY   G+  E+L +   M+++   +PN   YN L+   
Sbjct: 306 VWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEE-GFEPNVVAYNTLIHGL 364

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ-------------- 191
           CS   + EA +V  KM  +G  P+  TY  L   +A+ G+   A +              
Sbjct: 365 CSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNV 424

Query: 192 ---------------------MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
                                ++ +M  +   PN  T    + G C  G +E A+    +
Sbjct: 425 VVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQ 484

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
           M++    PN+  +N ++ G L         + +T MEE G++ ++VT++TI   + + G 
Sbjct: 485 MEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGK 544

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH-PNVVMFT 349
             +  ++   M+  G++PD   ++ L   Y   G+ + A  +L  +   G   P V  +T
Sbjct: 545 FEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYT 604

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           +++ G CN + ++ A+   +KM   GI  N  T+  L+ G
Sbjct: 605 SLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRG 644



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 133/289 (46%), Gaps = 5/289 (1%)

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           ++  K  +    TY I++     +  ++    ++ +M   GI      +  +   Y + G
Sbjct: 69  IANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVG 128

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
              +A +M + ++    +P  +    ++     E   +        MK     PN+  +N
Sbjct: 129 LAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYN 188

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            L+K        DG  K L  M   G +PDVV+++T++ + S    +GK +E  +  ++ 
Sbjct: 189 ILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSK---LGKVEEARELSIR- 244

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
             +P++ V++ L  G+ R  + ++   +L  M + G+ PNV+ ++TVIS       ++ A
Sbjct: 245 -FQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELA 303

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           ++++ KM   G +PN+ T+ +L+ GY    +   A  +   M E+G  P
Sbjct: 304 LAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEP 352



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 113/276 (40%), Gaps = 72/276 (26%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  I+N ++  G  P ++ YT++V  L R   F    SLI K+  D   P+++ FN  I 
Sbjct: 408 ASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIK 467

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYN----------------------------- 103
               SG V+ A+ +F +M+  GC P   TYN                             
Sbjct: 468 GLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMEL 527

Query: 104 ------TLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
                 T+  G+ NVGK EE+LKLL  M     VKP+  TYN L  A+C +  ++ A  +
Sbjct: 528 NLVTYNTIFGGFCNVGKFEEALKLLGKMLVG-GVKPDAITYNTLTYAYCMQGKVKTAIQL 586

Query: 158 VYKMVASG-IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
           + K+ A G   P+   Y +L                                   + G C
Sbjct: 587 LDKLSAGGKWVPEVAAYTSL-----------------------------------LWGIC 611

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
            +  +E+A+ +L +M    +  N   +N+L++G  +
Sbjct: 612 NQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFN 647



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 88/176 (50%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+   A  +F  + + G  P + TY  ++  L ++ R K  L L++++E+ GM+ +
Sbjct: 469 LCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELN 528

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +       G  +EA+K+  KM   G KP   TYNTL   Y   GK + +++LL 
Sbjct: 529 LVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLD 588

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            +S      P    Y  L+   C++  +EEA   + KM+  GI  +A T+N L R 
Sbjct: 589 KLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRG 644


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 198/407 (48%), Gaps = 1/407 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   EA  +   ++  G +P  ITY  LV  L +  +      L+ ++ +D  +PD+I 
Sbjct: 235 EGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 294

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I       N  +A ++  +M+++G  P   TY+ +I G    G+PE++  LL+ M+
Sbjct: 295 YNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 354

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K +KPN   Y  L+  +C + ++  A  +  KM    + PD   YN+L    ++ G  
Sbjct: 355 T-KGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRV 413

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             + +   +MQ   + PNE T   ++ GY K G++E A + + RM +  + PN V++  L
Sbjct: 414 EESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDL 473

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           ++ +    D + V      M + GV  D   +  ++   SS+G M     +  ++ K G 
Sbjct: 474 LESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGS 533

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD+HV+S L  G  +  + +KA  IL  M K GV PN+V +  +I G C +  +  A +
Sbjct: 534 VPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARN 593

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           ++  +   G+ PN  TY +L+ G  +      A  L   M   G+ P
Sbjct: 594 VFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITP 640



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 216/434 (49%), Gaps = 8/434 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G  P + TY+TL+ A  + + F +   ++ ++ + G   +++ +N +I     SG 
Sbjct: 108 MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGA 167

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V+EA    + M+D G  P   TY  LI G     +  E+  LL  MS    +KPN   Y 
Sbjct: 168 VEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC-AELKPNVVVYA 226

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+  +  + + +EA+ ++ +MVA+G+QP+ +TY+ L R   + G+  RA  +L +M  +
Sbjct: 227 NLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRD 286

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
             RP+  T  +I+ G+ +  N +DA R L  M+   + PN+  ++ +I G      S   
Sbjct: 287 SHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLC---QSGEP 343

Query: 260 DKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           +KA  L+EE    G+KP+   ++ ++  +   G +    EIFD M K  + PD++ ++ L
Sbjct: 344 EKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSL 403

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G  + G  +++      M++ G+ PN   ++ +I G+     ++ A  + ++M + G+
Sbjct: 404 IFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 463

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            PN   Y  LL  Y ++    +     + M ++GV        ++  +  + G    A R
Sbjct: 464 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 523

Query: 437 VLKSAEEDRQSMPN 450
           VL   E++  S+P+
Sbjct: 524 VLSEIEKN-GSVPD 536



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 215/441 (48%), Gaps = 36/441 (8%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P   TY  L+  L + +R     +L+ ++    +KP+ +++  +I+     GN DEA
Sbjct: 182 GLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEA 241

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            K+ ++M  +G +P   TY+ L++G   +G+ + +  LL+ M +D + +P+  TYN+++ 
Sbjct: 242 FKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH-RPDTITYNLIIE 300

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
                ++ ++A+ ++ +M  +GI P+  TY+ +     Q GE  +A  +L EM    ++P
Sbjct: 301 GHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKP 360

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N      ++SGYC+EGN+  A     +M ++ V P+L  +NSLI G   +   +   K  
Sbjct: 361 NAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYF 420

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M+E G+ P+  T+S ++  +   G +   +++   M+  G++P+  ++  L + Y ++
Sbjct: 421 AQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKS 480

Query: 324 GEPQKAESILTSM---------RKYG--VH------------------------PNVVMF 348
            + +K  S   SM         R YG  +H                        P+V ++
Sbjct: 481 DDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVY 540

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           +++ISG C     ++A  I ++M + G++PN+  Y  L+ G  ++     A  +   +  
Sbjct: 541 SSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILA 600

Query: 409 KGVRPKKSTIQLVADSWRAIG 429
           KG+ P   T   + D    +G
Sbjct: 601 KGLVPNCVTYTSLIDGSCKVG 621



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 218/465 (46%), Gaps = 16/465 (3%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           I   L + GHR   +    LV    +  R +    ++  +   G+ P     NA++    
Sbjct: 35  IHRALSDSGHRSPAV-LDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLL 93

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
            +  +    K+ + M  +G  P   TY+TLI+ Y  V + + + K+L  M +++    N 
Sbjct: 94  RADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEM-RERGCGLNT 152

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TYN+L+   C   ++EEA+     M   G+ PD  TY  L     +   +  A+ +L E
Sbjct: 153 VTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDE 212

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M   +++PN      ++ G+ +EGN ++A + +  M    V PN + +++L++G   +  
Sbjct: 213 MSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQ 272

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D     L  M     +PD +T++ I++             +  +M  AGI P+++ +SI
Sbjct: 273 MDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSI 332

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           +  G  ++GEP+KA  +L  M   G+ PN  ++  +ISG+C    +  A  I++KM ++ 
Sbjct: 333 MIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN 392

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           + P+L  Y +L++G  +  +   + +    M+E+G+ P + T   +   +   G      
Sbjct: 393 VLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNG------ 446

Query: 436 RVLKSAEEDRQSM------PNKKDEI-AVESIHRKQNLSASNSTF 473
             L+SAE+  Q M      PN    I  +ES  +  ++   +STF
Sbjct: 447 -DLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 490



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 192/406 (47%), Gaps = 2/406 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+P +A  +   +  +G +P    Y  L++   R+        +  K+ K  + PD
Sbjct: 337 LCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 396

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +N++I   S+ G V+E+ K F +M++ G  P   TY+ LI GY   G  E + +L+Q
Sbjct: 397 LYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQ 456

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D  +KPND  Y  L+ ++   + IE+  +    M+  G+  D   Y  L    +  
Sbjct: 457 RM-LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 515

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A ++L E++ N   P+      ++SG CK  + E A   L  M +  V PN+V +
Sbjct: 516 GNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCY 575

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+LI G     D          +   G+ P+ VT+++++D     G +     ++++M+ 
Sbjct: 576 NALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLA 635

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GI PD  V+S+L  G   AG+ ++A  ++  M   G H ++  F  ++ G+C   KMQ 
Sbjct: 636 TGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQE 694

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
            + +   +   G+ PN  T E ++ G  EA +      +   +++K
Sbjct: 695 TLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 740



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 90/401 (22%), Positives = 170/401 (42%), Gaps = 23/401 (5%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A  +   +++ G +P  + Y  L+ +  +    + + S    +   G+  D+ ++
Sbjct: 446 GDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIY 505

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+  S SGN++ A ++  +++ +G  P    Y++LI G       E++  +L  MS+
Sbjct: 506 GILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSK 565

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K V PN   YN L+   C    I  A NV   ++A G+ P+ VTY +L     + G+  
Sbjct: 566 -KGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDIS 624

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +  EM    + P+     ++ +G    G++E AM FL     L  H ++  FN+L+
Sbjct: 625 NAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM-FLIEEMFLRGHASISSFNNLV 683

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD-------- 299
            GF          K L ++   G+ P+ +T   I+   S AG + +   IF         
Sbjct: 684 DGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSE 743

Query: 300 -----------DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
                      DM+  G  P + V   + + + + G   KA  +   +           +
Sbjct: 744 SAARHFSSLFMDMINQGKIP-LDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSY 802

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIG-INPNLKTYETLLW 388
             ++   C   K+  A+++ ++M + G + P L     + W
Sbjct: 803 LAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVALLGIFW 843


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 217/418 (51%), Gaps = 7/418 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  ++A  +F  +++ G  P L+TY+++V AL + +      + + ++   G+ PD+  
Sbjct: 236 EGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWT 295

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I   S +G   EA+++F++M+     P   T N L+      GK +E+  +   M+
Sbjct: 296 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMA 355

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K   P+  +Y I++  + +K  + +  ++   M+  GI PD  T++ L +AYA  G  
Sbjct: 356 M-KGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGML 414

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A  +  EM+++ V+P+  T   +++  C+ G M+DAM    +M +  V P+   ++ L
Sbjct: 415 DKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCL 474

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           I+GF        + KA  L+ E    G++ D+V FS+I++     G +   Q IFD  V 
Sbjct: 475 IQGFCT---HGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVN 531

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G  PD  V+S+L  GY   G+ +KA  +  +M   G+ PNVV++ T+++G+C   ++  
Sbjct: 532 VGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDE 591

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            +S++ +M + GI P+   Y  ++ G   A +   A+     M E G+   K T  +V
Sbjct: 592 GLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIV 649



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 193/388 (49%), Gaps = 2/388 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT  TY  L+   TR  R +  L+   ++ + G++ D I+ N ++    E+   DEA+ I
Sbjct: 113 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 172

Query: 87  -FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV-KPNDRTYNILVRA 144
              +  + GC P   +Y+ L+K   + GK  ++  LL++M++   V  P+   Y  ++  
Sbjct: 173 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDC 232

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +  +  + +A ++  +MV  GI PD VTY+++  A  +     +AE  L +M N  V P+
Sbjct: 233 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPD 292

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   ++ GY   G  ++A+R    M+   + P++V  N L+                 
Sbjct: 293 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFD 352

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M   G  PDV ++  +++ +++ G +    ++FD M+  GI PDI+ FS+L K Y   G
Sbjct: 353 TMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCG 412

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              KA  I   MR +GV P+VV +TTVI+  C   KM  AM  + +M + G+ P+   Y 
Sbjct: 413 MLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 472

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVR 412
            L+ G+       +A+EL+  +   G+R
Sbjct: 473 CLIQGFCTHGSLLKAKELILEIMNNGMR 500



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/434 (23%), Positives = 208/434 (47%), Gaps = 3/434 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGH--RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK 61
           L  +GK  +A  +   + E G    P ++ YTT++    ++        L  ++ + G+ 
Sbjct: 196 LCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIP 255

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           PD + ++++++A  ++  + +A    ++M + G  P   TYN LI GY + G+ +E++++
Sbjct: 256 PDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRV 315

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
            + M +  ++ P+  T N+L+ + C    I+EA +V   M   G  PD  +Y  +   YA
Sbjct: 316 FKEMRR-HSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYA 374

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
             G       +   M  + + P+  T  +++  Y   G ++ AM     M++  V P++V
Sbjct: 375 TKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVV 434

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            + ++I     I   D   +    M + GV PD   +  ++  + + G + K +E+  ++
Sbjct: 435 TYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEI 494

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           +  G+  DI  FS +     + G    A++I       G HP+ V+++ ++ G+C   KM
Sbjct: 495 MNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKM 554

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           ++A+ +++ M   GI PN+  Y TL+ GY +  +      L + M +KG++P      ++
Sbjct: 555 EKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 614

Query: 422 ADSWRAIGLAREAK 435
            D     G    AK
Sbjct: 615 IDGLFVAGRTVPAK 628



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 194/389 (49%), Gaps = 11/389 (2%)

Query: 1   MNILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
           +N+L+G     GK  EA  +F+ +  +G  P + +Y  ++     +     +  L   + 
Sbjct: 331 LNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLML 390

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
            DG+ PD   F+ +I A +  G +D+AM IF +M+D G KP   TY T+I     +GK +
Sbjct: 391 GDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMD 450

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           ++++    M  D+ V P+   Y+ L++ +C+  S+ +A  ++ +++ +G++ D V ++++
Sbjct: 451 DAMEKFNQMI-DQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSI 509

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
                + G    A+ +     N    P+     +++ GYC  G ME A+R    M    +
Sbjct: 510 INNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 569

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGK 293
            PN+VV+ +L+ G+  I     +D+ L+L  E    G+KP  + ++ I+D    AG    
Sbjct: 570 EPNVVVYGTLVNGYCKIGR---IDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVP 626

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
            +  F +M ++GI  +   ++I+ +G+ +     +A  +   +R   V  +++   T+I+
Sbjct: 627 AKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIA 686

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           G     +++ A  ++  +   G+ P + T
Sbjct: 687 GMFQTRRVEEAKDLFASISRSGLVPCVVT 715



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/411 (22%), Positives = 194/411 (47%), Gaps = 1/411 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F  +      P ++T   L+ +L +  + K    +   +   G  PD   +
Sbjct: 307 GQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 366

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             M+N  +  G + +   +F  M   G  P   T++ LIK Y N G  ++++ +   M +
Sbjct: 367 KIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEM-R 425

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D  VKP+  TY  ++ A C    +++A     +M+  G+ PD   Y+ L + +  +G   
Sbjct: 426 DHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLL 485

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A++++ E+ NN +R +      I++  CK G + DA         +  HP+ VV++ L+
Sbjct: 486 KAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLM 545

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G+  +   +   +    M   G++P+VV + T+++ +   G + +   +F +M++ GI+
Sbjct: 546 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 605

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P   +++I+  G   AG    A+     M + G+  N   +  V+ G+        A+ +
Sbjct: 606 PSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFL 665

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
           ++++  + +  ++ T  T++ G  + ++   A++L   +   G+ P   T+
Sbjct: 666 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTV 716



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 108/249 (43%), Gaps = 40/249 (16%)

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD-GVDK 261
           P   T  I++    +    E A+ F  ++    +  ++++ N L+KGF + K +D  +D 
Sbjct: 113 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 172

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            L    E G  PDV +                                   +SIL K   
Sbjct: 173 LLHRTPELGCVPDVFS-----------------------------------YSILLKSLC 197

Query: 322 RAGEPQKAESILTSMRKYGV--HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             G+  +A+ +L  M + G    P+VV +TTVI  +     + +A  ++++M + GI P+
Sbjct: 198 DQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPD 257

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           L TY +++    +A+   +AE  L+ M  KGV P   T   +   + + G  +EA RV K
Sbjct: 258 LVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFK 317

Query: 440 SAEEDRQSM 448
             E  R S+
Sbjct: 318 --EMRRHSI 324


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 205/421 (48%), Gaps = 13/421 (3%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG------MKPDSI 65
           EA  +   ++  G+RP ++TY TL+  L         + L  ++          +KP+ +
Sbjct: 180 EATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLV 239

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            +  +I++  + G +D+  ++F +MK  G  P    Y+++I G  + G+ E +  L   M
Sbjct: 240 CYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEM 299

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
             D+ V PN  T+N+L+ A C    +EEA +++  M+  G  PD  TYNTL   +   G 
Sbjct: 300 V-DEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGR 358

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A  +   M++  +  +  +  ++++GYCK G M +A +    M   E+ P ++ +N+
Sbjct: 359 IDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNT 418

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           L+ G         V  A  L  E  V    P+  T++ ++D       + +  E+F  + 
Sbjct: 419 LLTGLFR---EGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLE 475

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
               +P I +F+ L  G  +A + + A  +   +   G+ PNV+ +T +I G C + +++
Sbjct: 476 NHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLE 535

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A  ++  M E G  PNL T+ TL+ G+ +  +  +  ELLQ M EK   P  STI +V 
Sbjct: 536 NAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVV 595

Query: 423 D 423
           D
Sbjct: 596 D 596



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 200/437 (45%), Gaps = 10/437 (2%)

Query: 6   GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
           G  K  EA  +FN LI+    P + ++ TL+ A+ + KR+  ++SL  ++   G+ PD I
Sbjct: 69  GHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFI 128

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
             N +IN       VD  + +  +M   G  P T T+ +L+KG     +  E+  LL+ M
Sbjct: 129 TLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKM 188

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG------IQPDAVTYNTLARA 179
            +    +PN  TY  L+   C   +   A  +  +M+         I+P+ V Y T+  +
Sbjct: 189 VR-MGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDS 247

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G   + +++  EM+   + P+      I+ G C  G  E A      M +  VHPN
Sbjct: 248 LCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPN 307

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +V FN LI         +  +  L LM + G  PD  T++T++D +   G +   +++F 
Sbjct: 308 VVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFV 367

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            M   GIE D   +++L  GY ++G   +A+ +   M    + P V+ + T+++G     
Sbjct: 368 SMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREG 427

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           K++ A +++ +M    + P   TY  LL G  +      A EL   +E    +P      
Sbjct: 428 KVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFN 487

Query: 420 LVADSW---RAIGLARE 433
            + D     R I +ARE
Sbjct: 488 CLIDGLCKARKIEIARE 504



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 137/286 (47%), Gaps = 1/286 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   GK  EA+++   +I+ G  P   TY TL+     + R      L   +E  G+
Sbjct: 315 IDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGI 374

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + D++ +N +IN   +SG + EA K++++M      PT  TYNTL+ G    GK  ++  
Sbjct: 375 ETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWN 434

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M +  ++ P   TYNIL+   C  N + EA  + + +     QP    +N L    
Sbjct: 435 LFGEM-KVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGL 493

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +   A ++   + +  + PN  T  +++ G CK G +E+A      M+E    PNL
Sbjct: 494 CKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNL 553

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
           V FN+L++GF    +   V + L  M E    PD  T S ++D  S
Sbjct: 554 VTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLS 599



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 103/202 (50%), Gaps = 1/202 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT+ITY TL+  L R+ + +   +L  +++   + P+S  +N +++   ++ ++ EAM++
Sbjct: 411 PTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMEL 470

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F  +++   +P+   +N LI G     K E + +L   +S +  ++PN  TY +++   C
Sbjct: 471 FHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHE-GLEPNVITYTVMIHGLC 529

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               +E A ++   M   G  P+ VT+NTL R + Q  E  +  ++L EM      P+  
Sbjct: 530 KSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDAS 589

Query: 207 TCGIIVSGYCKEGNMEDAMRFL 228
           T  I+V    K+    + +  L
Sbjct: 590 TISIVVDLLSKDEKYREYLHLL 611


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 199/419 (47%), Gaps = 4/419 (0%)

Query: 2   NILVGKGKPHE---AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           ++++G  + H+   A  +FN + +EG  P  +TY+TL+  L    R      LI ++   
Sbjct: 255 SMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILH 314

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+ P +      I A  + G  ++A ++F  MK+ GC+P   TY  LI G    G  + +
Sbjct: 315 GILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVA 374

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           + L   MS+D  V PN  TYN L+        I+ A+ V+  M  +G  P+ VTYN + +
Sbjct: 375 IGLFHRMSRD-GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIK 433

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            Y   G+  +A  ++  M       N  T   I+ GYC  GN   A+R L  M++    P
Sbjct: 434 GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 493

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           +   +  LI GF  I   +        M + G+ P+ VT++ ++D +     +     + 
Sbjct: 494 DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 553

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           + M ++G  P++  +++L  G  +      AE +   M + G+ PNVV +T +I G C  
Sbjct: 554 EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 613

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
                A+ ++ KM E G  PNL TY +L+   G+  +   AE L   +E  G+ P + T
Sbjct: 614 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEIT 672



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 206/406 (50%), Gaps = 1/406 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
             + L + G R  L  Y+ L+  L+R     +++    ++  +G++P+ +++NA+INA  
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + GNV +A  I +K+ +S   P T TY ++I G+      + +L++   M+++   +PN 
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE-GCEPNT 285

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY+ L+   C    + EA++++ +M+  GI P A T      A    G    A ++  +
Sbjct: 286 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 345

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M+N    PN  T   ++SG C  G ++ A+   +RM    V PN V +N+LI   ++ + 
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
                  L LM   G  P++VT++ ++  +   G   K   + ++M++ G   ++  ++ 
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           + KGY  +G    A  IL  MR  G  P+   +T +I G+C   KM+ A  ++ +M + G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           + PN  TY  L+ GY + ++   A  LL+ M+  G RP   T  ++
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 196/386 (50%), Gaps = 1/386 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   +A  +F  +  +G  P + TYT L++ L      K  + L  ++ +DG+ P+
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPN 389

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ +NA+IN   E+  +  A  +   M  +GC P   TYN +IKGY  +G P++++ ++ 
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M Q +    N  TYN +++ +C   +   A  ++  M   G +PD  +Y  L   + + 
Sbjct: 450 NMLQ-RGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKI 508

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +   A  +  EM ++ + PNE T   ++ GYCK+  ++ A   L  MK     PN+  +
Sbjct: 509 SKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTY 568

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N LI G     +  G ++   +M E G+ P+VVT++ ++D     G      E+F+ M++
Sbjct: 569 NVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIE 628

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G  P++  +S L +   + G+ ++AE++   + ++G+ P+ + +  +I  +  + K++ 
Sbjct: 629 QGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEH 688

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWG 389
           A +   +M + G  P L TY  L+ G
Sbjct: 689 AFNFLGRMIKAGCQPTLWTYGVLIKG 714



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/442 (23%), Positives = 178/442 (40%), Gaps = 31/442 (7%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A  I + + + G +P   +YT L+    +  + +S   L +++  DG+ P+ + +
Sbjct: 474 GNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTY 533

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQL 124
            A+I+   +   +D A  + + MK SGC+P   TYN LI G     N    EE  K++  
Sbjct: 534 TALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI- 592

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
              ++ + PN  TY  ++   C   S   A  +  KM+  G  P+ +TY++L RA  Q G
Sbjct: 593 ---EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEG 649

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +   AE +  E++ + + P+E T   ++  Y   G +E A  FL RM +    P L  + 
Sbjct: 650 KVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYG 709

Query: 245 SLIKGF------------------------LDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
            LIKG                             D D V      + E      V   + 
Sbjct: 710 VLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNA 769

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++   S+AG   +  E+   M+  G+ PD   ++ L    +R      A  +   M   G
Sbjct: 770 LVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQG 829

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
              ++  +  +I   C   + + A   +E M     NP+      L+ G           
Sbjct: 830 CEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCM 889

Query: 401 ELLQVMEEKGVRPKKSTIQLVA 422
           E L +ME +   P      ++A
Sbjct: 890 EFLHIMETRRYMPSFHIYTILA 911



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 138/300 (46%)

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+++  SK ++    + +  +  SG++     Y+ L    ++ G T         M +  
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           V+PN      +++  CK+GN+ DA   + ++ E E+ P+   + S+I G     D D   
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           +    M + G +P+ VT+ST+++    +G + +  ++  +M+  GI P  H  +      
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
              G  + A  +   M+  G  PNV  +T +ISG C +  ++ A+ ++ +M   G+ PN 
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNT 390

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            TY  L+    E ++   A  +L +M   G  P   T   +   +  +G  ++A  V+ +
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNN 450



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 139/322 (43%), Gaps = 26/322 (8%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G    A  +FN +IE+G  P L+TY++L+ AL ++ + +   +L +++E+ G+ PD
Sbjct: 610 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 669

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I +  MI A   SG V+ A     +M  +GC+PT  TY  LIKG  N     E L   Q
Sbjct: 670 EITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN-----EYLLADQ 724

Query: 124 LMSQDKNVKPNDRTYNILVRAWCS---KNSIEEAWNVVYKMVASGIQP--DAVTYNTLAR 178
            ++   +V PN           CS   + + ++A +V+   +A  + P       N L  
Sbjct: 725 RLAALPDVVPN-----------CSFGYQTTDQDAVSVMSAKLAE-LDPGLSVQVQNALVS 772

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM--KELEV 236
             +  G  + A ++L  M +  + P++     ++    +  N++ AM     M  +  EV
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEV 832

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           H N   +  LI     +            M      PD V  + ++D     G    C E
Sbjct: 833 HLN--GYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCME 890

Query: 297 IFDDMVKAGIEPDIHVFSILAK 318
               M      P  H+++ILA+
Sbjct: 891 FLHIMETRRYMPSFHIYTILAR 912


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 196/400 (49%), Gaps = 1/400 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E G  PT +T   L+    +  R    L  I +   DG +PD + F+  +N   ++G+VD
Sbjct: 259 EMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVD 318

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
            A+K+   M   GC+P   TY+T+I    N G+ EE+  ++  M  D    P+  T+N L
Sbjct: 319 HALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMV-DSGCLPDTTTFNTL 377

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           + A C++N +EEA ++  ++   G+ P+  T+N L  A  + G+ + A ++  EM+++  
Sbjct: 378 IVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGC 437

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            P+E T  I++   C  G +  A+  L  M+      + V +N++I G    +  +  ++
Sbjct: 438 TPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEE 497

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
               M+  G+  + +TF+T++D   +A  +    E+ D M+  G++P+   ++ +   Y 
Sbjct: 498 VFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYC 557

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           + G   KA  IL +M   G   +VV + T+I+G C A + Q A+ +   M   G+ P  K
Sbjct: 558 KQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPK 617

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            Y  ++           A  L + M E G  P   T ++V
Sbjct: 618 AYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIV 657



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 201/411 (48%), Gaps = 2/411 (0%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
           I +G  P  +T++T V  L +       L ++  + ++G +PD   ++ +IN    +G +
Sbjct: 293 IADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGEL 352

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           +EA  I  +M DSGC P T+T+NTLI       + EE+L L + ++  K + PN  T+NI
Sbjct: 353 EEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTV-KGLSPNVYTFNI 411

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+ A C       A  +  +M +SG  PD VTYN L       G+  +A  +L EM+ + 
Sbjct: 412 LINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSG 471

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
              +  T   I+ G CK   +E+A     +M    +  N + FN+LI G  + +  D   
Sbjct: 472 CPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAA 531

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           + +  M   G++P+ VT+++I+  +   G + K  +I   M   G E D+  ++ L  G 
Sbjct: 532 ELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGL 591

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            +A   Q A  +L  MR  G+ P    +  VI         + A+S++ +M E+G  P+ 
Sbjct: 592 CKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDA 651

Query: 381 KTYETLLWGYGEAKQPWR-AEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
            TY+ +  G      P + A + L  M + G  P+ S+ +++A+    +G+
Sbjct: 652 FTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLGM 702



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 212/459 (46%), Gaps = 42/459 (9%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  P ++T+ T++ AL R ++ ++ + ++ ++    + PD   F  ++    E G+++ 
Sbjct: 190 QGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEA 249

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKP--------------------------- 115
           A+++  +M + GC PT+ T N LI GY  +G+                            
Sbjct: 250 ALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVN 309

Query: 116 --------EESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ 167
                   + +LK+L LM Q+   +P+  TY+ ++   C+   +EEA  +V +MV SG  
Sbjct: 310 GLCQNGHVDHALKVLGLMLQE-GCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCL 368

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
           PD  T+NTL  A     +   A  +  E+    + PN  T  I+++  CK G+   A+R 
Sbjct: 369 PDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRL 428

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDA 284
              MK     P+ V +N LI    ++  S  + KAL L++E    G     VT++TI+D 
Sbjct: 429 FEEMKSSGCTPDEVTYNILID---NLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDG 485

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
                 + + +E+FD M   GI  +   F+ L  G   A     A  ++  M   G+ PN
Sbjct: 486 LCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPN 545

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
            V + ++++ +C    + +A  I + M   G   ++ TY TL+ G  +A++   A +LL+
Sbjct: 546 NVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLR 605

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            M  KG++P       V  S       R+A  + +   E
Sbjct: 606 GMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTE 644



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 170/358 (47%), Gaps = 2/358 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EA  I N +++ G  P   T+ TL+ AL  + + +  L L  ++   G+
Sbjct: 343 INCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGL 402

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   FN +INA  + G+   A+++F++MK SGC P   TYN LI    + GK  ++L 
Sbjct: 403 SPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALD 462

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M +      +  TYN ++   C +  IEEA  V  +M  +GI  +A+T+NTL    
Sbjct: 463 LLKEM-EVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGL 521

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                   A +++ +M +  ++PN  T   I++ YCK+GN+  A   L  M       ++
Sbjct: 522 CNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDV 581

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V + +LI G    + +    K L  M   G+KP    ++ ++ +            +F +
Sbjct: 582 VTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFRE 641

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEP-QKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           M + G  PD   + I+ +G  R G P ++A   L  M   G  P    F  +  G  N
Sbjct: 642 MTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLN 699



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 90/390 (23%), Positives = 172/390 (44%), Gaps = 2/390 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G    A  +   +++EG  P + TY+T++  L      +    +++++   G 
Sbjct: 308 VNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGC 367

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD+  FN +I A      ++EA+ + +++   G  P   T+N LI     VG P  +++
Sbjct: 368 LPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVR 427

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M +     P++ TYNIL+   CS   + +A +++ +M  SG     VTYNT+    
Sbjct: 428 LFEEM-KSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGL 486

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      AE++  +M    +  N  T   ++ G C    ++DA   + +M    + PN 
Sbjct: 487 CKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNN 546

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +NS++  +    +       L  M   G + DVVT++T+++    A       ++   
Sbjct: 547 VTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRG 606

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC-NAV 359
           M   G++P    ++ + +   R    + A S+   M + G  P+   +  V  G C    
Sbjct: 607 MRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGG 666

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
            ++ A     +M + G  P   ++  L  G
Sbjct: 667 PIKEAFDFLVEMADNGFIPEFSSFRMLAEG 696



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/421 (22%), Positives = 198/421 (47%), Gaps = 8/421 (1%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLIS-KVEKDGMKPDSILFNAMINACSESGNVD 81
           EGH   L    + + +  R + F     L+S +++  G++ ++ ++N ++   +E   + 
Sbjct: 119 EGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIK 178

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
                + +M   G +P   T+NT+I       +   ++ +L+ MS   +V P++ T+  L
Sbjct: 179 LLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSS-CDVAPDETTFTTL 237

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +  +  + SIE A  +  +M   G  P +VT N L   Y + G    A   + +   +  
Sbjct: 238 MEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGF 297

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            P+  T    V+G C+ G+++ A++ L  M +    P++  ++++I    +  + +    
Sbjct: 298 EPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKG 357

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            +  M + G  PD  TF+T++ A  +   + +  ++  ++   G+ P+++ F+IL     
Sbjct: 358 IVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALC 417

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           + G+P  A  +   M+  G  P+ V +  +I   C++ K+ +A+ + ++M   G   +  
Sbjct: 418 KVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTV 477

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY T++ G  + ++   AEE+   M+  G+     T   + D     GL   A+R+  +A
Sbjct: 478 TYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLID-----GLC-NAERIDDAA 531

Query: 442 E 442
           E
Sbjct: 532 E 532



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/443 (23%), Positives = 195/443 (44%), Gaps = 17/443 (3%)

Query: 7   KGKPHEAHYIFNCLI--EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           +  P  A  + N  +  ++G  P+   Y  ++  L     F  +  L+ ++ ++G +   
Sbjct: 66  QADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGL 125

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDS-GCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            L  + I + +     D+A  +     D  G +  T  YN L+       K    +KLL+
Sbjct: 126 GLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSK----IKLLE 181

Query: 124 LMSQD---KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               +   + ++P+  T+N ++ A C       A  ++ +M +  + PD  T+ TL   +
Sbjct: 182 SAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGF 241

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A ++   M      P   T  ++++GYCK G + DA+ ++ +       P+ 
Sbjct: 242 VEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDR 301

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V F++ + G       D   K L LM + G +PDV T+ST+++   + G + + + I + 
Sbjct: 302 VTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQ 361

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV +G  PD   F+ L        + ++A  +   +   G+ PNV  F  +I+  C    
Sbjct: 362 MVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGD 421

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
              A+ ++E+M   G  P+  TY  L+     + +  +A +LL+ ME  G      T   
Sbjct: 422 PHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNT 481

Query: 421 VADSWRAIGLAREAKRVLKSAEE 443
           + D     GL +  +R ++ AEE
Sbjct: 482 IID-----GLCK--RRRIEEAEE 497



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 1/114 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA-CSESGNVD 81
           +G +PT   Y  ++ +L R    +  LSL  ++ + G  PD+  +  +    C   G + 
Sbjct: 610 KGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIK 669

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           EA     +M D+G  P  S++  L +G  N+G  +  ++ ++L+ +  N + +D
Sbjct: 670 EAFDFLVEMADNGFIPEFSSFRMLAEGLLNLGMDDYLIRAIELIVEKANFRESD 723


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 209/414 (50%), Gaps = 7/414 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L  KG+  ++ +  + ++ +G +   ++Y TL+  L +    +  + L+  +E    
Sbjct: 87  MKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRST 146

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ +++N +I+   +   V+EA  ++ +M   G  P   TY TLI G+  +G+   +  
Sbjct: 147 RPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFS 206

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M   KN+ P    YNIL+ A C + +++EA N++  M   GI+P  VTY+TL   Y
Sbjct: 207 LLDEMIL-KNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGY 265

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              GE   A+Q+   M    V PN  +  I+++G CK   +++AM  L  M    + P+ 
Sbjct: 266 CLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDT 325

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +NSLI G      S  +  AL LM E    G   DVVT+++++DA      + K   +
Sbjct: 326 VTYNSLIDGLC---KSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATAL 382

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F  M + GI+P ++ ++ L  G  + G  + A+ +   +   G   +V  +T +ISG C 
Sbjct: 383 FMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCK 442

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
                 A++I  KM + G  PN  T+E ++    E  +  +AE+LL  M  KG+
Sbjct: 443 EGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 212/442 (47%), Gaps = 3/442 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G R   +T   L+       +     S++ K+ K G +PD+I  N ++      G V +
Sbjct: 39  KGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKK 98

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           ++    K+   G +    +Y TL+ G   +G+   ++KLL+ M +D++ +PN   YN ++
Sbjct: 99  SLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLR-MIEDRSTRPNVVMYNTII 157

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
              C    + EA+++  +M A GI PDA+TY TL   +   G+   A  +L EM    + 
Sbjct: 158 DGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNIN 217

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P      I+++  CKEGN+++A   L  M +  + P +V +++L+ G+  + +     + 
Sbjct: 218 PGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQI 277

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              M + GV P+V +++ +++       + +   +  +M+   + PD   ++ L  G  +
Sbjct: 278 FHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCK 337

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           +G    A +++  M   G   +VV +T+++   C    + +A +++ KM E GI P + T
Sbjct: 338 SGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYT 397

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           Y  L+ G  +  +   A+EL Q +  KG      T  ++       G+  EA  + KS  
Sbjct: 398 YTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAI-KSKM 456

Query: 443 EDRQSMPNKKD-EIAVESIHRK 463
           ED   +PN    EI + S+  K
Sbjct: 457 EDNGCIPNAVTFEIIIRSLFEK 478



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/417 (20%), Positives = 179/417 (42%), Gaps = 75/417 (17%)

Query: 97  PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ--DKNVKPNDRTYNILVRAWCSKNSIEEA 154
           P    +N ++   G++ K ++ L  + L  Q   K ++ N  T NIL+  +C    +  +
Sbjct: 8   PPIIEFNKIL---GSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFS 64

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
           ++V+ K++  G QPD +T NTL +                                   G
Sbjct: 65  FSVLGKILKLGYQPDTITLNTLMK-----------------------------------G 89

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
            C +G ++ ++ F  ++       + V + +L+ G   I ++    K L ++E+   +P+
Sbjct: 90  LCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPN 149

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIF-----------------------------------D 299
           VV ++TI+D      L+ +  +++                                   D
Sbjct: 150 VVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLD 209

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M+   I P +++++IL     + G  ++A+++L  M K G+ P VV ++T++ G+C   
Sbjct: 210 EMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVG 269

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           ++Q A  I+  M ++G+NPN+ +Y  ++ G  + K+   A  LL+ M  K + P   T  
Sbjct: 270 EVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYN 329

Query: 420 LVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQI 476
            + D     G    A  ++       Q          ++++ + QNL  + + F+++
Sbjct: 330 SLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM 386


>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
          Length = 496

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 189/363 (52%), Gaps = 2/363 (0%)

Query: 46  KSILSLISKVEKDGMKP-DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNT 104
           +S L+++++  K G    D     A++N C + G+V EA ++F +M   G  P   TY  
Sbjct: 19  RSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTA 78

Query: 105 LIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS 164
           L+ GY   G+ E+   L + M +   V+PN  TYN L+  WC     E A ++  +M   
Sbjct: 79  LMHGYFTHGQREKGFALFEEMRRG-GVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVR 137

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           GI  + V+YNTL     ++G+ + A ++L  M+    RP+  T  ++V GY K G M +A
Sbjct: 138 GIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNA 197

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
           + F  +MK     P+ V +N LI GF   +D    ++AL+ M+E G++P  VT++ ++D+
Sbjct: 198 LPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDS 257

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           ++    MGK  EI   M KAG+E D H + +L +     G  + A  +  SM + GV P+
Sbjct: 258 FARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPS 317

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
            V++  +I G+       +A+ +  +M + G+ PN  +Y   +    +  +   AE LL 
Sbjct: 318 NVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLD 377

Query: 405 VME 407
            ME
Sbjct: 378 DME 380



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 162/364 (44%), Gaps = 36/364 (9%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA  +F+ +   G  P  +TYT L+       + +   +L  ++ + G++P+   +
Sbjct: 52  GDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTY 111

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I     +G  + A  +F +M   G      +YNTLI G    GK  ++ KLL +M +
Sbjct: 112 NCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMM-R 170

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            +  +P+  T+N+LV  +     +  A     +M A+G QP AVTYN L   + +  +  
Sbjct: 171 TEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMT 230

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           RA + L +M+   + P + T  I++  + +E +M  A   L                   
Sbjct: 231 RANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILA------------------ 272

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
                     G++KA       G++ D  T+  ++ A    G M   +++F  M + G+E
Sbjct: 273 ----------GMEKA-------GLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVE 315

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P   ++ ++  GY R G   KA  ++  MR+ G+ PN   +   I   C   K Q A ++
Sbjct: 316 PSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEAL 375

Query: 368 YEKM 371
            + M
Sbjct: 376 LDDM 379



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 112/221 (50%), Gaps = 6/221 (2%)

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
           C  +V+G CK G++ +A R    M  L + PN V + +L+ G+      +   K   L E
Sbjct: 41  CTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQRE---KGFALFE 97

Query: 268 EF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
           E    GV+P++ T++ ++  W   G   + + +FD+M   GI  ++  ++ L  G  R G
Sbjct: 98  EMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHG 157

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           +   A  +L  MR  G  P+++ F  ++ G+  A KM  A+  + +M   G  P+  TY 
Sbjct: 158 KLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYN 217

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            L+ G+  A+   RA   L  M+E+G+ P K T  ++ DS+
Sbjct: 218 MLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSF 258



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 126/251 (50%), Gaps = 5/251 (1%)

Query: 2   NILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N L+G+    G+   A  +F+ +   G    +++Y TL+A L R  +      L+  +  
Sbjct: 112 NCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRT 171

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
           +G +P  I FN +++   ++G +  A+  F +MK +G +P+  TYN LI G+        
Sbjct: 172 EGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTR 231

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           + + L  M +++ ++P   TY IL+ ++  +N + +A+ ++  M  +G++ DA TY  L 
Sbjct: 232 ANRALSDM-KERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLV 290

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
           RA    G    A ++   M    V P+     +++ GY +EG+   A++ +  M++  + 
Sbjct: 291 RALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLI 350

Query: 238 PNLVVFNSLIK 248
           PN   +   I+
Sbjct: 351 PNSASYGLTIR 361



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 81/156 (51%)

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           DV   + +++     G + + + +FD+M   G+ P+   ++ L  GY   G+ +K  ++ 
Sbjct: 37  DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             MR+ GV PN+  +  +I  WC   + +RA S++++M   GI  N+ +Y TL+ G    
Sbjct: 97  EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
            + W A +LL +M  +G RP   T  L+ D +   G
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAG 192


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 226/444 (50%), Gaps = 18/444 (4%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  IF  ++E G  P + TY  L+         +  L    ++E++G  P+ + +N +I+
Sbjct: 187 AEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIID 246

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
           A  +   + EA K+ + M   G  P   +YN +I G    G+ +E+ ++L+ MS+ + V 
Sbjct: 247 AYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV- 305

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+  T+N L+  +C+  +  +A  +  +MV +G+ P+ VTY TL  +  + G   RA + 
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEF 365

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           L +M++  + PN RT   ++ G+ ++G ++ A + +  M E    P ++ +N+LI G   
Sbjct: 366 LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCI 425

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +   +     L  M E G  PDVV++STI+  +     + K  ++  +MV  GI PD+  
Sbjct: 426 LGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVAT 485

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           +S L +G  +     +   +   M   G+ P+ V +T++I+ +C    + +A+ ++++M 
Sbjct: 486 YSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMI 545

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEE-LLQVMEEKGVRPKKSTIQLVADSWRAI--- 428
           + G +P++ TY  L+ G+ +  +   A+  LL+++ E+ V P + T   + D+   +   
Sbjct: 546 QKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESV-PNEITYNTLIDNCNNLEFK 604

Query: 429 ------------GLAREAKRVLKS 440
                       GL  EA RVL+S
Sbjct: 605 SALALMKGFCMKGLMNEADRVLES 628



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 213/425 (50%), Gaps = 4/425 (0%)

Query: 16  IFNCLIEEGH--RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA 73
           +F CL    +  + +   +  +V +  R       LS+++  +  G  P  + +NA+++A
Sbjct: 117 LFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDA 176

Query: 74  CSESG-NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              +  +V  A  IF++M +SG  P   TYN LI+G+   G  E  L     M ++  + 
Sbjct: 177 VIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCL- 235

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           PN  TYN ++ A+C    I EA+ ++  M   G+ P+ ++YN +     + G+     ++
Sbjct: 236 PNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEI 295

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           L EM   +  P+  T   +++GYC  GN   A+     M +  + PN+V + +LI     
Sbjct: 296 LEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCK 355

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
             + +   + L  M + G+ P+  T++T++D +S  G + +  +I  +MV+ G  P I  
Sbjct: 356 AGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIIT 415

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++ L  G+   G  + A  +L  M + G  P+VV ++T+ISG+C   ++++A  +  +M 
Sbjct: 416 YNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMV 475

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
             GI+P++ TY +L+ G  + ++     +L Q M   G+ P + T   + +++   G   
Sbjct: 476 AKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLD 535

Query: 433 EAKRV 437
           +A R+
Sbjct: 536 KALRL 540



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 204/445 (45%), Gaps = 16/445 (3%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  +   +  +G  P LI+Y  ++  L R+ + K    ++ ++ K    PD + FN
Sbjct: 253 KIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFN 312

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +IN     GN  +A+ +  +M  +G  P   TY TLI      G    +++ L  M +D
Sbjct: 313 TLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM-RD 371

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           + + PN RTY  L+  +  +  +++A+ ++ +MV +G  P  +TYN L   +   G    
Sbjct: 372 RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMED 431

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  +L EM      P+  +   I+SG+C+   +E A +    M    + P++  ++SLI+
Sbjct: 432 ASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQ 491

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G    +    V      M   G+ PD VT++++++A+   G + K   + D+M++ G  P
Sbjct: 492 GLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSP 551

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS--------------- 353
           DI  +++L  G+ +    ++A+ +L  +      PN + + T+I                
Sbjct: 552 DIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMK 611

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G+C    M  A  + E M + G   N + Y  ++ G+ +     +A  L + M   G  P
Sbjct: 612 GFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAP 671

Query: 414 KKSTIQLVADSWRAIGLAREAKRVL 438
              TI  +A S    G   E  ++L
Sbjct: 672 HSVTIMALAKSLYHEGKEVELNQLL 696



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 181/355 (50%), Gaps = 18/355 (5%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G  H+A  +   +++ G  P ++TYTTL+ ++ +       +  + ++   G+ P+   +
Sbjct: 322 GNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTY 381

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+  S+ G + +A +I ++M ++G  PT  TYN LI G+  +G+ E++  LLQ M +
Sbjct: 382 TTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIE 441

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            +   P+  +Y+ ++  +C    +E+A+ +  +MVA GI PD  TY++L +   +     
Sbjct: 442 -RGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLG 500

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
               +  EM +  + P+E T   +++ YC EG+++ A+R    M +    P++V +N LI
Sbjct: 501 EVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLI 560

Query: 248 KGF-LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD---------------AWSSAGLM 291
            GF    +  +     L L+ E  V P+ +T++T++D                +   GLM
Sbjct: 561 NGFNKQSRTKEAKRLLLKLLYEESV-PNEITYNTLIDNCNNLEFKSALALMKGFCMKGLM 619

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
            +   + + M++ G + +  V++++  G+ + G  +KA ++   M   G  P+ V
Sbjct: 620 NEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSV 674



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 164/320 (51%), Gaps = 2/320 (0%)

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR-AE 190
           K +   ++++V++    N I +A ++V    + G  P  ++YN +  A  +  ++ + AE
Sbjct: 129 KSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAE 188

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            +  EM  + V PN  T  I++ G+C  GN+E  + F   M+     PN+V +N++I  +
Sbjct: 189 GIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAY 248

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
             ++      K L LM   G+ P++++++ +++     G M +  EI ++M K    PD 
Sbjct: 249 CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             F+ L  GY   G   +A  +   M K G+ PNVV +TT+I+  C A  + RAM   ++
Sbjct: 309 VTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQ 368

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M + G++PN +TY TL+ G+ +     +A ++++ M E G  P   T   + +    +G 
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428

Query: 431 AREAKRVLKSAEEDRQSMPN 450
             +A  +L+   E R  +P+
Sbjct: 429 MEDASGLLQEMIE-RGFIPD 447



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/414 (24%), Positives = 196/414 (47%), Gaps = 23/414 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  E   I   + +  + P  +T+ TL+        F   L L +++ K+G+
Sbjct: 280 INGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGL 339

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +  +IN+  ++GN++ AM+   +M+D G  P   TY TLI G+   G  +++ +
Sbjct: 340 SPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQ 399

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +++ M ++    P   TYN L+   C    +E+A  ++ +M+  G  PD V+Y+T+   +
Sbjct: 400 IMKEMVEN-GFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGF 458

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  E  +A Q+  EM    + P+  T   ++ G CK+  + +       M  L + P+ 
Sbjct: 459 CRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDE 518

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V + SLI  +    D   +DKAL L +E    G  PD+VT++ +++ ++      + + +
Sbjct: 519 VTYTSLINAYCIEGD---LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRL 575

Query: 298 FDDMVKAGIEPDIHVFSI---------------LAKGYVRAGEPQKAESILTSMRKYGVH 342
              ++     P+   ++                L KG+   G   +A+ +L SM + G  
Sbjct: 576 LLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYK 635

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG-YGEAKQ 395
            N  ++  +I G      +++A ++Y++M   G  P+  T   L    Y E K+
Sbjct: 636 LNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKE 689



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 159/355 (44%), Gaps = 22/355 (6%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   +A+ I   ++E G  PT+ITY  L+       R +    L+ ++ + G  PD + 
Sbjct: 391 QGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVS 450

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +I+    +  +++A ++  +M   G  P  +TY++LI+G     +  E   L Q M 
Sbjct: 451 YSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEM- 509

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
               + P++ TY  L+ A+C +  +++A  +  +M+  G  PD VTYN L   + +   T
Sbjct: 510 LSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRT 569

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVS---------------GYCKEGNMEDAMRFLYRM 231
             A+++L ++   +  PNE T   ++                G+C +G M +A R L  M
Sbjct: 570 KEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESM 629

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSA 288
            +     N  V+N +I G   + +   ++KA  L +E    G  P  VT   +  +    
Sbjct: 630 LQKGYKLNEEVYNVIIHGHSKVGN---IEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHE 686

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
           G   +  ++ D  +K+    +  +  +L     + G      ++L  M   G+ P
Sbjct: 687 GKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741


>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
 gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
          Length = 467

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 189/363 (52%), Gaps = 2/363 (0%)

Query: 46  KSILSLISKVEKDGMKP-DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNT 104
           +S L+++++  K G    D     A++N C + G+V EA ++F +M   G  P   TY  
Sbjct: 19  RSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTA 78

Query: 105 LIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS 164
           L+ GY   G+ E+   L + M +   V+PN  TYN L+  WC     E A ++  +M   
Sbjct: 79  LMHGYFTHGQREKGFALFEEMRRG-GVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVR 137

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           GI  + V+YNTL     ++G+ + A ++L  M+    RP+  T  ++V GY K G M +A
Sbjct: 138 GIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNA 197

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
           + F  +MK     P+ V +N LI GF   +D    ++AL+ M+E G++P  VT++ ++D+
Sbjct: 198 LPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDS 257

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           ++    MGK  EI   M KAG+E D H + +L +     G  + A  +  SM + GV P+
Sbjct: 258 FARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPS 317

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
            V++  +I G+       +A+ +  +M + G+ PN  +Y   +    +  +   AE LL 
Sbjct: 318 NVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLD 377

Query: 405 VME 407
            ME
Sbjct: 378 DME 380



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 162/364 (44%), Gaps = 36/364 (9%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA  +F+ +   G  P  +TYT L+       + +   +L  ++ + G++P+   +
Sbjct: 52  GDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTY 111

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I     +G  + A  +F +M   G      +YNTLI G    GK  ++ KLL +M +
Sbjct: 112 NCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMM-R 170

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            +  +P+  T+N+LV  +     +  A     +M A+G QP AVTYN L   + +  +  
Sbjct: 171 TEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMT 230

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           RA + L +M+   + P + T  I++  + +E +M  A   L                   
Sbjct: 231 RANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILA------------------ 272

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
                     G++KA       G++ D  T+  ++ A    G M   +++F  M + G+E
Sbjct: 273 ----------GMEKA-------GLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVE 315

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P   ++ ++  GY R G   KA  ++  MR+ G+ PN   +   I   C   K Q A ++
Sbjct: 316 PSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEAL 375

Query: 368 YEKM 371
            + M
Sbjct: 376 LDDM 379



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 6/222 (2%)

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
            C  +V+G CK G++ +A R    M  L + PN V + +L+ G+      +   K   L 
Sbjct: 40  ACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQRE---KGFALF 96

Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           EE    GV+P++ T++ ++  W   G   + + +FD+M   GI  ++  ++ L  G  R 
Sbjct: 97  EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+   A  +L  MR  G  P+++ F  ++ G+  A KM  A+  + +M   G  P+  TY
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
             L+ G+  A+   RA   L  M+E+G+ P K T  ++ DS+
Sbjct: 217 NMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSF 258



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 126/251 (50%), Gaps = 5/251 (1%)

Query: 2   NILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N L+G+    G+   A  +F+ +   G    +++Y TL+A L R  +      L+  +  
Sbjct: 112 NCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRT 171

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
           +G +P  I FN +++   ++G +  A+  F +MK +G +P+  TYN LI G+        
Sbjct: 172 EGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTR 231

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           + + L  M +++ ++P   TY IL+ ++  +N + +A+ ++  M  +G++ DA TY  L 
Sbjct: 232 ANRALSDM-KERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLV 290

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
           RA    G    A ++   M    V P+     +++ GY +EG+   A++ +  M++  + 
Sbjct: 291 RALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLI 350

Query: 238 PNLVVFNSLIK 248
           PN   +   I+
Sbjct: 351 PNSASYGLTIR 361



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 81/156 (51%)

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           DV   + +++     G + + + +FD+M   G+ P+   ++ L  GY   G+ +K  ++ 
Sbjct: 37  DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             MR+ GV PN+  +  +I  WC   + +RA S++++M   GI  N+ +Y TL+ G    
Sbjct: 97  EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
            + W A +LL +M  +G RP   T  L+ D +   G
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAG 192


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 206/409 (50%), Gaps = 7/409 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EAH +   +      P +++Y+T++         K  L L+  ++  G+KP+   +
Sbjct: 272 GKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTY 331

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N++I    + G   EA K+ ++M      P    Y TLI G+  +G    + K    M  
Sbjct: 332 NSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM-L 390

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K + P+  TY  L++ +     + E  N+ ++M++ G++PD VTY TL   Y + GE  
Sbjct: 391 SKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMV 450

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +  EM    + PN  T G ++ G CK G ++ A   L  M++  +  N+ ++NS++
Sbjct: 451 NAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMV 510

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            G   I  +  +++A+ LM+E    G+ PD +T++T++DA+   G + K  ++  +M+  
Sbjct: 511 NG---ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDR 567

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G++P +  F++L  G+   G  +  + +L  M + G+ P+ + + T++   C    M   
Sbjct: 568 GLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTT 627

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             IY++M   G+ P+  TY  L+ G+ +A+    A  L + M EKG  P
Sbjct: 628 TKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVP 676



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 193/389 (49%), Gaps = 1/389 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G +P   TY +++  L +  +      ++ ++    + PD++++  +I+   + G+V  
Sbjct: 322 KGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRT 381

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A K F +M      P   TY TLI+G+G  GK  E   L   M   + +KP++ TY  L+
Sbjct: 382 ANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMIS-RGLKPDEVTYTTLI 440

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
             +C    +  A+++  +MV  G+ P+ VTY  L     ++GE   A ++L EM+   ++
Sbjct: 441 DVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQ 500

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
            N      +V+G CK GN+E A++ +  M+   + P+ + + ++I  +  + D D   K 
Sbjct: 501 LNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKL 560

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           L  M + G++P VVTF+ +M+ +   G++     +   M++ GI PD   ++ L K +  
Sbjct: 561 LQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCI 620

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
                    I   MR  GV P+   +  +I G C A  ++ A  +Y++M E G  P + +
Sbjct: 621 RNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTS 680

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           Y  L+  + + K+   A EL + M   G+
Sbjct: 681 YNALIKRFYKKKKILEARELFEEMRGHGL 709



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 213/416 (51%), Gaps = 11/416 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN-ACSESGNVDEAMK 85
           P  I +      L           L+ K+   G+       NA ++   + S  ++ A+K
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +F    + G    T++YN +I     +GK +E+ +LL  M   ++  P+  +Y+ ++  +
Sbjct: 248 VFC---EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDF-RSSTPDVVSYSTVIDGY 303

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C    +++A  ++  M   G++P+  TYN++     + G+++ AE++L EM + ++ P+ 
Sbjct: 304 CHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDN 363

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
                ++ G+ K G++  A ++   M   ++ P+ + + +LI+GF        V +   L
Sbjct: 364 VVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGF---GQGGKVIEPQNL 420

Query: 266 MEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
             E    G+KPD VT++T++D +  AG M     + ++MV+ G+ P+I  +  L  G  +
Sbjct: 421 FHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCK 480

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            GE   A  +L  MRK G+  NV ++ ++++G C A  +++A+ + ++M   GI+P+  T
Sbjct: 481 HGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAIT 540

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           Y T++  Y       +A +LLQ M ++G++P   T  ++ + +  +G+  +  R+L
Sbjct: 541 YTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLL 596



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 187/378 (49%), Gaps = 3/378 (0%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P+ I F+       E G++ EA K+  K+   G   T  + N  +     +    E +++
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFL---SRIANNSEGIEM 244

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
              +  +  +  N  +YNI++ + C    ++EA  ++ +M      PD V+Y+T+   Y 
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
             GE  +A +++ +MQ   ++PN  T   I+   CK G   +A + L  M   ++ P+ V
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
           V+ +LI GF  +      +K    M    + PD +T++T++  +   G + + Q +F +M
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           +  G++PD   ++ L   Y +AGE   A S+   M + G+ PN+V +  +I G C   ++
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             A  + ++M + G+  N+  Y +++ G  +A    +A +L++ ME  G+ P   T   V
Sbjct: 485 DTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTV 544

Query: 422 ADSWRAIGLAREAKRVLK 439
            D++  +G   +A ++L+
Sbjct: 545 IDAYCRLGDIDKAHKLLQ 562



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 119/253 (47%), Gaps = 34/253 (13%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+   A+ + + + ++G +  +  Y ++V  + +    +  + L+ ++E  G+ PD
Sbjct: 478 LCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL- 122
           +I +  +I+A    G++D+A K+ Q+M D G +PT  T+N L+ G+  +G  E+  +LL 
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLG 597

Query: 123 ---------------QLMSQ------------------DKNVKPNDRTYNILVRAWCSKN 149
                           LM Q                  ++ V P+  TYNIL++  C   
Sbjct: 598 WMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKAR 657

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
           +++EAW +  +M+  G  P   +YN L + + +  +   A ++  EM+ + +  +     
Sbjct: 658 NLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYN 717

Query: 210 IIVSGYCKEGNME 222
             V    +EG++E
Sbjct: 718 FFVDMCYEEGDVE 730



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 1/157 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN     G   +   +   ++E+G  P  ITY TL+     +    +   +  ++   G+
Sbjct: 580 MNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGV 639

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PDS  +N +I    ++ N+ EA  ++++M + G  PT ++YN LIK +    K  E+ +
Sbjct: 640 APDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARE 699

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
           L + M +   +  +   YN  V     +  +E   N+
Sbjct: 700 LFEEM-RGHGLVADGEIYNFFVDMCYEEGDVEITLNL 735


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 206/409 (50%), Gaps = 7/409 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EAH +   +      P +++Y+T++         K  L L+  ++  G+KP+   +
Sbjct: 272 GKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTY 331

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N++I    + G   EA K+ ++M      P    Y TLI G+  +G    + K    M  
Sbjct: 332 NSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM-L 390

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K + P+  TY  L++ +     + E  N+ ++M++ G++PD VTY TL   Y + GE  
Sbjct: 391 SKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMV 450

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +  EM    + PN  T G ++ G CK G ++ A   L  M++  +  N+ ++NS++
Sbjct: 451 NAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMV 510

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            G   I  +  +++A+ LM+E    G+ PD +T++T++DA+   G + K  ++  +M+  
Sbjct: 511 NG---ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDR 567

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G++P +  F++L  G+   G  +  + +L  M + G+ P+ + + T++   C    M   
Sbjct: 568 GLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTT 627

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             IY++M   G+ P+  TY  L+ G+ +A+    A  L + M EKG  P
Sbjct: 628 TKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVP 676



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 193/389 (49%), Gaps = 1/389 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G +P   TY +++  L +  +      ++ ++    + PD++++  +I+   + G+V  
Sbjct: 322 KGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRT 381

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A K F +M      P   TY TLI+G+G  GK  E   L   M   + +KP++ TY  L+
Sbjct: 382 ANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMIS-RGLKPDEVTYTTLI 440

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
             +C    +  A+++  +MV  G+ P+ VTY  L     ++GE   A ++L EM+   ++
Sbjct: 441 DVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQ 500

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
            N      +V+G CK GN+E A++ +  M+   + P+ + + ++I  +  + D D   K 
Sbjct: 501 LNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKL 560

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           L  M + G++P VVTF+ +M+ +   G++     +   M++ GI PD   ++ L K +  
Sbjct: 561 LQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCI 620

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
                    I   MR  GV P+   +  +I G C A  ++ A  +Y++M E G  P + +
Sbjct: 621 RNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTS 680

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           Y  L+  + + ++   A EL + M   G+
Sbjct: 681 YNALIKRFYKKRKFXEARELFEEMRGHGL 709



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 213/416 (51%), Gaps = 11/416 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN-ACSESGNVDEAMK 85
           P  I +      L           L+ K+   G+       NA ++   + S  ++ A+K
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +F    + G    T++YN +I     +GK +E+ +LL  M   ++  P+  +Y+ ++  +
Sbjct: 248 VFC---EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDF-RSSTPDVVSYSTVIDGY 303

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C    +++A  ++  M   G++P+  TYN++     + G+++ AE++L EM + ++ P+ 
Sbjct: 304 CHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDN 363

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
                ++ G+ K G++  A ++   M   ++ P+ + + +LI+GF        V +   L
Sbjct: 364 VVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGF---GQGGKVIEPQNL 420

Query: 266 MEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
             E    G+KPD VT++T++D +  AG M     + ++MV+ G+ P+I  +  L  G  +
Sbjct: 421 FHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCK 480

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            GE   A  +L  MRK G+  NV ++ ++++G C A  +++A+ + ++M   GI+P+  T
Sbjct: 481 HGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAIT 540

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           Y T++  Y       +A +LLQ M ++G++P   T  ++ + +  +G+  +  R+L
Sbjct: 541 YTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLL 596



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 187/378 (49%), Gaps = 3/378 (0%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P+ I F+       E G++ EA K+  K+   G   T  + N  +     +    E +++
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFL---SRIANNSEGIEM 244

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
              +  +  +  N  +YNI++ + C    ++EA  ++ +M      PD V+Y+T+   Y 
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
             GE  +A +++ +MQ   ++PN  T   I+   CK G   +A + L  M   ++ P+ V
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
           V+ +LI GF  +      +K    M    + PD +T++T++  +   G + + Q +F +M
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           +  G++PD   ++ L   Y +AGE   A S+   M + G+ PN+V +  +I G C   ++
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             A  + ++M + G+  N+  Y +++ G  +A    +A +L++ ME  G+ P   T   V
Sbjct: 485 DTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTV 544

Query: 422 ADSWRAIGLAREAKRVLK 439
            D++  +G   +A ++L+
Sbjct: 545 IDAYCRLGDIDKAHKLLQ 562



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 119/253 (47%), Gaps = 34/253 (13%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+   A+ + + + ++G +  +  Y ++V  + +    +  + L+ ++E  G+ PD
Sbjct: 478 LCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL- 122
           +I +  +I+A    G++D+A K+ Q+M D G +PT  T+N L+ G+  +G  E+  +LL 
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLG 597

Query: 123 ---------------QLMSQ------------------DKNVKPNDRTYNILVRAWCSKN 149
                           LM Q                  ++ V P+  TYNIL++  C   
Sbjct: 598 WMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKAR 657

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
           +++EAW +  +M+  G  P   +YN L + + +  +   A ++  EM+ + +  +     
Sbjct: 658 NLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYN 717

Query: 210 IIVSGYCKEGNME 222
             V    +EG++E
Sbjct: 718 FFVDMCYEEGDVE 730



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 1/157 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN     G   +   +   ++E+G  P  ITY TL+     +    +   +  ++   G+
Sbjct: 580 MNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGV 639

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PDS  +N +I    ++ N+ EA  ++++M + G  PT ++YN LIK +    K  E+ +
Sbjct: 640 APDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARE 699

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
           L + M +   +  +   YN  V     +  +E   N+
Sbjct: 700 LFEEM-RGHGLVADGEIYNFFVDMCYEEGDVEITLNL 735


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 215/463 (46%), Gaps = 42/463 (9%)

Query: 2   NILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK 61
           N L    +  EA      ++  G+ P ++TYTTL+  L  + R      L  +++K G  
Sbjct: 134 NCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT 193

Query: 62  PDSILFNAMINACSESGNV----------------------------------------- 80
           P+++ +  +I    ++GNV                                         
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRE 253

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           DEA ++F++MK  G  P   +Y+TLI G+   GK ++S  L   M  D+ V+P+  T+++
Sbjct: 254 DEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMV-DQGVQPDMVTFSV 312

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+   C +  + EA  ++  M+  GI P+ +TYN+L   +   G+   A ++   M +  
Sbjct: 313 LIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKG 372

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           + P+E +   +++GYCK   +++AM     M ++   PN+  + +L+KG           
Sbjct: 373 LEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAK 432

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           K   +M+ +GV  +   +   +D       + +  E+F+++     + +I  +S L  G 
Sbjct: 433 KLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGL 492

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            +AG+ + A  +   + + G+ P+VV +  +I G+C   ++  A  ++EKM E G  P++
Sbjct: 493 CKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDI 552

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
             Y TLL G+ E  +     +LL  M +K V P  ++  +V D
Sbjct: 553 IAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVD 595



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 213/434 (49%), Gaps = 5/434 (1%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           ++N +   G  P L T + L   L    R    L+ ++ + + G  P+ + +  +I    
Sbjct: 113 LYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLC 172

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK-----N 130
               + EA ++F +M+  GC P   TY TLIKG    G    +LKL + M  D      N
Sbjct: 173 MEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVN 232

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
            KP   TY+I++   C     +EA  +  +M A G+ PD ++Y+TL   +   G+  +++
Sbjct: 233 CKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSK 292

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            +  EM +  V+P+  T  +++   CKEG + +A + L  M +  + PNL+ +NSLI GF
Sbjct: 293 HLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGF 352

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
             + D +   +    M   G++PD ++++T+++ +     + +   ++++M++ G  P++
Sbjct: 353 CMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNV 412

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             +  L KG  + G+   A+ +   M+ YGV  N  ++   + G C    +  AM ++ +
Sbjct: 413 TTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNE 472

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           +       N++ Y  L+ G  +A +   A EL + + ++G++P   T  ++   +  +G 
Sbjct: 473 LKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQ 532

Query: 431 AREAKRVLKSAEED 444
              A  + +  EE+
Sbjct: 533 VDNANILFEKMEEN 546



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 172/364 (47%), Gaps = 1/364 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F  +  +G  P +I+Y+TL+       ++     L  ++   G++PD + F
Sbjct: 251 GREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTF 310

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +I+   + G V EA K+ + M   G  P   TYN+LI G+  VG    + +L   M  
Sbjct: 311 SVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPS 370

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K ++P++ +Y  L+  +C    ++EA N+  +M+  G  P+  TY TL +   Q G+  
Sbjct: 371 -KGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVG 429

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A+++   M+   V  N +  GI + G CK   + +AM     +K      N+  ++ LI
Sbjct: 430 DAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLI 489

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G       +   +    + + G++PDVVT++ ++  +   G +     +F+ M + G  
Sbjct: 490 DGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCT 549

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PDI  ++ L  G+    + ++   +L  M +  V PN    T V+   C   K ++ + +
Sbjct: 550 PDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDL 609

Query: 368 YEKM 371
             K 
Sbjct: 610 LPKF 613



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 169/383 (44%), Gaps = 57/383 (14%)

Query: 76  ESGNVD--EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP 133
           ++GN+   +A   F  M  S   P  S++N L+ G   +    +   L   M +   + P
Sbjct: 66  KTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEM-RLAGLSP 124

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           +  T +IL    C+ N + EA   +  ++  G  P+ VTY TL                 
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTL----------------- 167

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
                             + G C E  + +A R   RM++L   PN V + +LIKG    
Sbjct: 168 ------------------IKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLC-- 207

Query: 254 KDSDGVDKALTLMEE-------FGV--KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
             +  V+ AL L +E       +GV  KP V+T+S I+D     G   + +E+F++M   
Sbjct: 208 -QTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQ 266

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+ PD+  +S L  G+  AG+  +++ +   M   GV P++V F+ +I   C   K+  A
Sbjct: 267 GMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEA 326

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK----STIQL 420
             + E M + GI PNL TY +L+ G+        A EL   M  KG+ P +    + I  
Sbjct: 327 KKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLING 386

Query: 421 VADSWR---AIGLAREAKRVLKS 440
              +W+   A+ L  E  +V KS
Sbjct: 387 YCKTWKVKEAMNLYNEMLQVGKS 409



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 120/273 (43%), Gaps = 34/273 (12%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +GK  EA  +   +I+ G  P LITY +L+          S   L   +   G+
Sbjct: 314 IDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGL 373

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD I +  +IN   ++  V EAM ++ +M   G  P  +TY TL+KG    GK  ++ K
Sbjct: 374 EPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKK 433

Query: 121 LLQLMS----------------------------------QDKNVKPNDRTYNILVRAWC 146
           L  +M                                   +  N K N   Y+ L+   C
Sbjct: 434 LFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLC 493

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               +E AW +  K+   G+QPD VTYN +   + + G+   A  +  +M+ N   P+  
Sbjct: 494 KAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDII 553

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
               ++ G+C+   +E+ ++ L++M + +V PN
Sbjct: 554 AYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPN 586



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/306 (21%), Positives = 123/306 (40%), Gaps = 45/306 (14%)

Query: 216 CKEGNME--DAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
           CK GN+    A  F   M      P +  FN L+ G   I     +      M   G+ P
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           D+ T S + +   +   + +       +++ G  P++  ++ L KG        +A  + 
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184

Query: 334 TSMRKYGVHPNVVMFTTVISGWCN------AVKMQRAM---------------------- 365
             M+K G  PN V + T+I G C       A+K+ + M                      
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244

Query: 366 -------------SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
                         ++E+M   G+ P++ +Y TL+ G+  A +  +++ L   M ++GV+
Sbjct: 245 DGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQ 304

Query: 413 PKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKD-EIAVESIHRKQNLSASNS 471
           P   T  ++ D+    G   EAK++L+   + R  +PN       ++      +L+++  
Sbjct: 305 PDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQ-RGIVPNLITYNSLIDGFCMVGDLNSARE 363

Query: 472 TFLQIP 477
            FL +P
Sbjct: 364 LFLSMP 369


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 105/426 (24%), Positives = 205/426 (48%), Gaps = 1/426 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L   G+    +  +N ++  G  P   TY  L+ +L + +RF+   S+   +   G 
Sbjct: 24  LEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGC 83

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   ++ +I        VDEA ++  +M D G +P   TY +L+ G   +GK +E++ 
Sbjct: 84  SPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVD 143

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M   +   P+   YN+L+  +  K  + EA+ +  +M+  G  P   TYN+L   +
Sbjct: 144 LFSRMVY-RGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGF 202

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++ GE  R + +  +M      PN  T   ++ G+CK G+M +A R    M+ L   P++
Sbjct: 203 SRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDV 262

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+LI+G           + L  M   GV PD+V+++ ++D +S +G +    ++F +
Sbjct: 263 VSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYE 322

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           + K+G+EPD   +S +     RAG+   A  +   M   G  P+  +   ++ G C   +
Sbjct: 323 IPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGER 382

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  +  +++ M +    P +  Y  L++   +AK+     E+   + E+G  P     ++
Sbjct: 383 LTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKV 442

Query: 421 VADSWR 426
           + ++ R
Sbjct: 443 ILETLR 448



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 175/377 (46%), Gaps = 1/377 (0%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           ++Y  L+  L +  R   +    + +   G  P++  +  ++ +  ++   +EA  +F+ 
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M   GC P   +Y+ LI G     K +E+ +LL  M  D   +PN  TY  L+   C   
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI-DGGHQPNVVTYGSLLSGLCKMG 136

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            ++EA ++  +MV  G  PD V YN L   +++ G+   A ++  EM      P   T  
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            ++SG+ ++G           M      PN+  FN+L+ GF  + D     +    M   
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G  PDVV+++T++    S G   + Q +  +M+++G+ PDI  ++IL  GY ++G    A
Sbjct: 257 GCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             +   + K G+ P+   ++T+I   C A K+  A  +++ M   G  P+      L+ G
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIG 376

Query: 390 YGEAKQPWRAEELLQVM 406
               ++   + EL Q M
Sbjct: 377 LCRGERLTESCELFQAM 393



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 182/380 (47%), Gaps = 9/380 (2%)

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ +N ++   ++SG  D     +  M  +GC P T TY  L++      + EE+  + +
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M+  +   PN  +Y+IL+   C    ++EA  ++ +M+  G QP+ VTY +L     + 
Sbjct: 77  GMAA-QGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A  +   M      P+     +++ G+ K+G+M +A R    M E    P +  +
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           NSL+ GF    +   V      M   G  P++ TF+ ++D +   G M +   +F +M  
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G  PD+  ++ L +G    G+P +A+ +L  M + GV P++V +  +I G+  +  +  
Sbjct: 256 LGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH 315

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS-TIQLVA 422
           A+ ++ ++ + G+ P+  +Y T++     A +   A  + + M   G  P  +  I LV 
Sbjct: 316 AIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLV- 374

Query: 423 DSWRAIGLAREAKRVLKSAE 442
                IGL R  +R+ +S E
Sbjct: 375 -----IGLCR-GERLTESCE 388



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 173/357 (48%), Gaps = 36/357 (10%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  + N +I+ GH+P ++TY +L++ L +  + K  + L S++   G  PD +++N
Sbjct: 102 KVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYN 161

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I+  S+ G++ EA ++F++M + GC PT  TYN+L+ G+   G+      L + M + 
Sbjct: 162 VLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQ 221

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
             V PN  T+N L+  +C    + EA  +  +M + G  PD V+YNTL R     G+ + 
Sbjct: 222 GCV-PNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHE 280

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A+++L EM  + V P+  +  I++ GY K G ++ A++  Y + +  + P+   ++++I 
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340

Query: 249 ----------GFLDIKD----SDGVDKALTL---------------------MEEFGVKP 273
                      F+  KD        D A+ +                     M +F   P
Sbjct: 341 CLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVP 400

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
            +  ++ +M     A       EIF ++ + G  PD+ +  ++ +   R+ +   AE
Sbjct: 401 LIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKDAAE 457


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/523 (25%), Positives = 233/523 (44%), Gaps = 55/523 (10%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK-- 61
           L   G  H+A  +F+ ++     P L  +  ++ AL ++        L+ KV + GM   
Sbjct: 164 LYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSIN 223

Query: 62  --------------------------------PDSILFNAMINACSESGNVDEAMKIFQK 89
                                           PD + +N +I    +     EAM   ++
Sbjct: 224 LFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRR 283

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M + GC P   TYNT+I GY  +   +E+ +LL+  +  K   P+  TY  L+   C++ 
Sbjct: 284 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLK-DAVFKGFVPDQVTYCSLINGLCAEG 342

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            +E A  +  +  A GI+PD V YN+L +     G    A Q++ EM      P+ +T  
Sbjct: 343 DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 402

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
           I+++G CK GN+ DA   +         P++  FN+LI G+      D   + +  M E+
Sbjct: 403 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 462

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G+ PD +T++++++    AG + +  E F +M+  G  P+   ++IL + + R+ + ++A
Sbjct: 463 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 522

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             ++  M + G+HP+ V F T+I G+C    ++ A  +++K+ E G +    T+ TL+  
Sbjct: 523 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGA 582

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMP 449
           +        AE++   M  KG R    T +++ D               K+A  DR  M 
Sbjct: 583 FSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGS------------CKTANVDRAYMH 630

Query: 450 NKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSEHNGSSAAKI 492
                  VE I  K+    S STF ++   ++  H    A  I
Sbjct: 631 ------LVEMI--KKGFIPSMSTFGRVINSLTVNHRVFQAVGI 665



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 175/356 (49%), Gaps = 1/356 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  P  +TY +L+  L  +   +  L L ++ +  G+KPD +++N+++      G +  
Sbjct: 322 KGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILH 381

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+++  +M + GC P   TYN +I G   +G   ++  ++      K   P+  T+N L+
Sbjct: 382 ALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIM-KGYLPDVFTFNTLI 440

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
             +C +  ++ A  +V +M   GI PD +TYN++     + G+     +   EM      
Sbjct: 441 DGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCH 500

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           PN  T  I++  +C+   ME+A + + +M +  +HP+ V FN+LI GF    D +G    
Sbjct: 501 PNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLL 560

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              +EE G      TF+T++ A+S    M   ++IFD+M+  G   D + + +L  G  +
Sbjct: 561 FQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCK 620

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
                +A   L  M K G  P++  F  VI+      ++ +A+ I   M +IG+ P
Sbjct: 621 TANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 676



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 208/447 (46%), Gaps = 13/447 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ LV      +AH ++  ++  G  P L T+T  + +     R    L L+  +   G 
Sbjct: 95  MDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG- 153

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
              ++ +  ++      G+  +A ++F +M  +   P  + +N ++      G   E+  
Sbjct: 154 ---AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGL 210

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  + Q + +  N  TYNI +R  C    + EA  +V  M A  + PD VTYNTL R  
Sbjct: 211 LLGKVIQ-RGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGL 268

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A   L  M N    P++ T   I+ GYCK   +++A   L         P+ 
Sbjct: 269 CKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQ 328

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V + SLI G     D   V++AL L  E    G+KPD+V +++++      GL+    ++
Sbjct: 329 VTYCSLINGLCAEGD---VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQV 385

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            ++M + G  PDI  ++I+  G  + G    A  ++      G  P+V  F T+I G+C 
Sbjct: 386 MNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCK 445

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            +K+  A+ + E+M E GI P+  TY ++L G  +A +     E  Q M  KG  P   T
Sbjct: 446 RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPIT 505

Query: 418 IQLVADSW-RAIGLAREAKRVLKSAEE 443
             ++ +++ R+  +   +K ++K ++E
Sbjct: 506 YNILIENFCRSNKMEEASKVIVKMSQE 532



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/506 (23%), Positives = 223/506 (44%), Gaps = 26/506 (5%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            +PH A  +   L   G     + Y T+V  L           L  ++    + P+   F
Sbjct: 137 ARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAF 192

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +++A  + G+V EA  +  K+   G      TYN  I+G    G+  E+++L+  M  
Sbjct: 193 NKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMR- 251

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                P+  TYN L+R  C K+  +EA + + +M+  G  PD  TYNT+   Y +     
Sbjct: 252 -AYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQ 310

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++L +       P++ T   +++G C EG++E A+      +   + P++VV+NSL+
Sbjct: 311 EATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLV 370

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           KG           + +  M E G  PD+ T++ +++     G +     + +D +  G  
Sbjct: 371 KGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYL 430

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+  F+ L  GY +  +   A  ++  M +YG+ P+ + + +V++G C A K+      
Sbjct: 431 PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNET 490

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           +++M   G +PN  TY  L+  +  + +   A +++  M ++G+ P   +   +   +  
Sbjct: 491 FQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCR 550

Query: 428 IGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSEHNGS 487
            G    A  + +  EE                    +  SA+  TF  + G  S + N  
Sbjct: 551 NGDLEGAYLLFQKLEE--------------------KGYSATADTFNTLIGAFSGKLNMH 590

Query: 488 SAAKIRSQIVLRSDTVWTATKSLFVN 513
            A KI  +++ +     + T  + ++
Sbjct: 591 MAEKIFDEMLSKGHRADSYTYRVLID 616



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 124/518 (23%), Positives = 221/518 (42%), Gaps = 57/518 (11%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G   EA  +   +I+ G    L TY   +  L    R    + L+     DGM
Sbjct: 196 LHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLV-----DGM 250

Query: 61  K----PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           +    PD + +N +I    +     EAM   ++M + GC P   TYNT+I GY  +   +
Sbjct: 251 RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQ 310

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           E+ +LL+  +  K   P+  TY  L+   C++  +E A  +  +  A GI+PD V YN+L
Sbjct: 311 EATELLK-DAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSL 369

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV------------------------ 212
            +     G    A Q++ EM      P+ +T  I++                        
Sbjct: 370 VKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY 429

Query: 213 -----------SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
                       GYCK   ++ A++ + RM E  + P+ + +NS++ G       + V++
Sbjct: 430 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNE 489

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
               M   G  P+ +T++ +++ +  +  M +  ++   M + G+ PD   F+ L  G+ 
Sbjct: 490 TFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 549

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           R G+ + A  +   + + G       F T+I  +   + M  A  I+++M   G   +  
Sbjct: 550 RNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSY 609

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS-------WRAIGLAREA 434
           TY  L+ G  +     RA   L  M +KG  P  ST   V +S       ++A+G+    
Sbjct: 610 TYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIM 669

Query: 435 KRVLKSAEEDRQSMPNKKDEIA-----VESIHRKQNLS 467
            ++    E     +   K EIA     VE + +K ++S
Sbjct: 670 VKIGVVPEVVDTILNADKKEIAAPKILVEDLMKKGHIS 707



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 87/387 (22%), Positives = 155/387 (40%), Gaps = 43/387 (11%)

Query: 60  MKPDSI--LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
           + P +I  L+ A I A + +G + +A+  F++M    C P    YN ++    +    ++
Sbjct: 47  LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 106

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           + K+   M     V P+  T+ I +R++C       A  ++  +   G    AV Y T+ 
Sbjct: 107 AHKVYVRMLA-AGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVV 161

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
                +G T+ A Q+  +M +  V PN      ++   CK G++ +A   L ++ +  + 
Sbjct: 162 CGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMS 221

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
            NL  +N  I+G                  E G  P+ V     M A++           
Sbjct: 222 INLFTYNIWIRGLC----------------EAGRLPEAVRLVDGMRAYAV---------- 255

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
                     PD+  ++ L +G  +   PQ+A   L  M   G  P+   + T+I G+C 
Sbjct: 256 ----------PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCK 305

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              +Q A  + +     G  P+  TY +L+ G        RA EL    + KG++P    
Sbjct: 306 ISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVV 365

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEED 444
              +       GL   A +V+    E+
Sbjct: 366 YNSLVKGLCLQGLILHALQVMNEMAEE 392


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 216/449 (48%), Gaps = 11/449 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKV----EKDG 59
           L  +G  +  + +   ++E   +P ++T+  L+  + + +R    L ++ K+    E  G
Sbjct: 315 LAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGG 374

Query: 60  M----KPDSILFNAMINACSESGNVDEAMKIFQKMKDS-GCKPTTSTYNTLIKGYGNVGK 114
           +    +PD +++N +I+   + G   E + + ++M+   GC P T TYN LI G+   G+
Sbjct: 375 ISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGE 434

Query: 115 PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYN 174
            E+  +L   M+++  V PN  T N LV   C    +  A N   +    G++ DAVTY 
Sbjct: 435 IEKGKELFDEMNKE-GVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYT 493

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
            L  A+       +A ++  EM  +   P+      ++SG+ + G M DA   L  +K+L
Sbjct: 494 ALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKL 553

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            + P+ V +N+LI GF        V + L  MEE G+KPD +T++T++   S  G +   
Sbjct: 554 GIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFA 613

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG-VHPNVVMFTTVIS 353
           Q++   M+KAG+ P +  +  +   Y   G   +A  I   M+    V PN V++  +I+
Sbjct: 614 QKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILIN 673

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             C   K++ A+S+ E M   G+ PN  TY  +  G  + K   +  E +  M E    P
Sbjct: 674 SLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNP 733

Query: 414 KKSTIQLVADSWRAIGLAREAKRVLKSAE 442
              T++++ +   A+G     K+ +   E
Sbjct: 734 DYITMEILTEWLSAVGEIERLKKFVAGCE 762



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 190/388 (48%), Gaps = 30/388 (7%)

Query: 50  SLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM----KDSGCKPTTSTYNTL 105
           SLI   + D    ++ L N  ++    SG V +A+K+  +M     DS C+P  +T + L
Sbjct: 176 SLILFNDLDPSVKNTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDIL 235

Query: 106 IKGYGNVGKPEESLKLLQLMSQDK--NVKPNDRTYNILVRAW---------CSKNSIEEA 154
                   + EE      L+S+D+  N+      + +L+ ++         C        
Sbjct: 236 FSFLLKRERNEE------LLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRG 289

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
           W++  +M+  G   ++   N+L    A+ G   R  +++ +M    ++PN  T GI+++ 
Sbjct: 290 WDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINH 349

Query: 215 YCKEGNMEDAMRFLYRMK--------ELEVHPNLVVFNSLIKGFLDI-KDSDGVDKALTL 265
            CK   ++DA+  L +M          + V P++V++N+LI G   + +  +G+     +
Sbjct: 350 MCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERM 409

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
             + G  PD +T++ ++D +  AG + K +E+FD+M K G+ P++   + L  G  R G 
Sbjct: 410 RSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGR 469

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
              A +     ++ G+  + V +T +I+ +CN    ++AM ++ +M + G +P+   Y T
Sbjct: 470 VSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYT 529

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           L+ G+ +A +   A  +L  +++ G+RP
Sbjct: 530 LISGFSQAGRMADASFVLAELKKLGIRP 557



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/417 (23%), Positives = 190/417 (45%), Gaps = 17/417 (4%)

Query: 16  IFNCLIEEGHRPTLIT---YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           I N +++ G    LI+      L+  L R ++      L +++ K G   +S   N+++ 
Sbjct: 254 IVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLT 313

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK--- 129
             +  GN +   ++ +KM +   +P   T+  LI       + +++L++L+ MS  K   
Sbjct: 314 GLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESG 373

Query: 130 ----NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS-GIQPDAVTYNTLARAYAQYG 184
               +V+P+   YN L+   C     +E   ++ +M +  G  PD +TYN L   + + G
Sbjct: 374 GISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAG 433

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           E  + +++  EM    V PN  T   +V G C+ G +  A+ F    +   +  + V + 
Sbjct: 434 EIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYT 493

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
           +LI  F ++ +    +KA+ L  E    G  PD + + T++  +S AG M     +  ++
Sbjct: 494 ALINAFCNVNN---FEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAEL 550

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
            K GI PD   ++ L  G+ R  +  +   +L  M + G+ P+ + + T+I+       +
Sbjct: 551 KKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDL 610

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
           + A  +  KM + G+ P + TY  ++  Y        A E+ + M+     P  + I
Sbjct: 611 KFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVI 667



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 113/504 (22%), Positives = 212/504 (42%), Gaps = 90/504 (17%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGH----RPTLITYTTLVAALTRQKRFKSILS------ 50
           ++IL+  G+  +A  + + + E       RP   T   L + L +++R + +LS      
Sbjct: 197 LSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVN 256

Query: 51  LISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG 110
           L+ K  + G+   S     +I     +   +    +F +M   G    ++  N+L+ G  
Sbjct: 257 LVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLA 316

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM--------V 162
             G      +L++ M +  +++PN  T+ IL+   C    +++A  V+ KM        +
Sbjct: 317 REGNFNRMNELMEKMVE-MDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGI 375

Query: 163 ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNME 222
           +  ++PD V YNTL                                   + G CK G  +
Sbjct: 376 SVSVEPDVVIYNTL-----------------------------------IDGLCKVGRQQ 400

Query: 223 DAMRFLYRMKELE-VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
           + +  + RM+  +   P+ + +N LI GF    + +   +    M + GV P+VVT +T+
Sbjct: 401 EGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTL 460

Query: 282 M--------------------------DAWSSAGLMG---------KCQEIFDDMVKAGI 306
           +                          DA +   L+          K  E+F++M+K+G 
Sbjct: 461 VGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGC 520

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD  V+  L  G+ +AG    A  +L  ++K G+ P+ V + T+I G+C   K  R   
Sbjct: 521 SPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFE 580

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           + ++M E G+ P+  TY TL+    +      A+++++ M + GV P  +T   V +++ 
Sbjct: 581 MLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYC 640

Query: 427 AIGLAREAKRVLKSAEEDRQSMPN 450
             G   EA  + K  +   +  PN
Sbjct: 641 LNGNGNEAMEIFKDMKAASKVPPN 664


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 216/418 (51%), Gaps = 7/418 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  ++A  +F  +++ G  P L+TY+++V AL + +      + + ++   G+ PD+  
Sbjct: 234 EGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWT 293

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I   S +G   EA+++F++M+     P     NTL+      GK +E+  +   M+
Sbjct: 294 YNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMA 353

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K   P+  +Y I++  + +K  + +  ++   M+  GI P   T+N L +AYA  G  
Sbjct: 354 M-KGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGML 412

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A  +  EM+++ V+P+  T   +++  C+ G M+DAM    +M +  V P+   ++ L
Sbjct: 413 DKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCL 472

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           I+GF        + KA  L+ E    G++ D+V F +I++     G +   Q IFD  V 
Sbjct: 473 IQGFC---THGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVN 529

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ PD  V+++L  GY   G+ +KA  +  +M   G+ PNVV + T+++G+C   ++  
Sbjct: 530 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 589

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            +S++ +M + GI P+   Y  ++ G  EA +   A+     M E G+   K T  +V
Sbjct: 590 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 647



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 194/388 (50%), Gaps = 2/388 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT  TY  L+   TR  R +  L+   ++ + G++ D+I+ + ++    E+   DEA+ I
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 87  -FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV-KPNDRTYNILVRA 144
              +  + GC P   +YN L+K   N GK  ++  LL++M++   V  P+   YN ++  
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +  +  + +A ++  +MV  GI PD VTY+++  A  +     +AE  L +M N  V P+
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   ++ GY   G  ++A+R    M+   + P++V  N+L+                 
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M   G  PDV +++ +++ +++ G +    ++FD M+  GI P I  F++L K Y   G
Sbjct: 351 TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCG 410

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              KA  I   MR +GV P+VV + TVI+  C   KM  AM  + +M + G+ P+   Y 
Sbjct: 411 MLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVR 412
            L+ G+       +A+EL+  +   G+R
Sbjct: 471 CLIQGFCTHGSLLKAKELISEIMNNGMR 498



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 99/435 (22%), Positives = 207/435 (47%), Gaps = 1/435 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F  +  +   P ++   TL+ +L +  + K    +   +   G  PD   +
Sbjct: 305 GQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 364

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             M+N  +  G + +   +F  M   G  P   T+N LIK Y N G  ++++ +   M +
Sbjct: 365 TIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM-R 423

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D  VKP+  TY  ++ A C    +++A     +M+  G+ PD   Y+ L + +  +G   
Sbjct: 424 DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLL 483

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A++++ E+ NN +R +    G I++  CK G + DA         + +HP+ VV+N L+
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G+  +   +   +    M   G++P+VV + T+++ +   G + +   +F +M++ GI+
Sbjct: 544 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 603

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P   +++I+  G   AG    A+     M + G+  N   ++ V+ G         A+ +
Sbjct: 604 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 663

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           ++++  + +  ++ T  T++ G  + ++   A++L   +   G+ P   T  ++  +   
Sbjct: 664 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIK 723

Query: 428 IGLAREAKRVLKSAE 442
            GL  EA+ +  S +
Sbjct: 724 EGLVEEAEDMFSSMQ 738



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/428 (24%), Positives = 204/428 (47%), Gaps = 11/428 (2%)

Query: 1   MNILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
           +N L+G     GK  EA  +F+ +  +G  P + +YT ++     +     +  L   + 
Sbjct: 329 LNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLML 388

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
            DG+ P    FN +I A +  G +D+AM IF +M+D G KP   TY T+I     +GK +
Sbjct: 389 GDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMD 448

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           ++++    M  D+ V P+   Y+ L++ +C+  S+ +A  ++ +++ +G++ D V + ++
Sbjct: 449 DAMEKFNQMI-DQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSI 507

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
                + G    A+ +     N  + P+     +++ GYC  G ME A+R    M    +
Sbjct: 508 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 567

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGK 293
            PN+V + +L+ G+  I     +D+ L+L  E    G+KP  + ++ I+D    AG    
Sbjct: 568 EPNVVGYGTLVNGYCKIGR---IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVP 624

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
            +  F +M ++GI  +   +SI+ +G  +     +A  +   +R   V  +++   T+I+
Sbjct: 625 AKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIA 684

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G     +++ A  ++  +   G+ P   TY  ++    +      AE++   M+  G  P
Sbjct: 685 GMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP 744

Query: 414 KKSTIQLV 421
               +  V
Sbjct: 745 DSRLLNHV 752



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 206/454 (45%), Gaps = 44/454 (9%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM--KPDSILFNAMINACSESGN 79
           E G  P + +Y  L+ +L  Q +      L+  + + G    PD + +N +I+   + G+
Sbjct: 177 ELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGD 236

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V++A  +F++M   G  P   TY++++         +++   L+ M  +K V P++ TYN
Sbjct: 237 VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMV-NKGVLPDNWTYN 295

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+  + S    +EA  V  +M    I PD V  NTL  +  +YG+   A  +   M   
Sbjct: 296 NLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMK 355

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+  +  I+++GY  +G + D       M    + P +  FN LIK +    +   +
Sbjct: 356 GQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAY---ANCGML 412

Query: 260 DKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           DKA+ +   M + GVKP VVT+ T++ A    G M    E F+ M+  G+ PD + +  L
Sbjct: 413 DKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCL 472

Query: 317 AKGYVRAGEPQKAESILT-----SMR------------------------------KYGV 341
            +G+   G   KA+ +++      MR                                G+
Sbjct: 473 IQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGL 532

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
           HP+ V++  ++ G+C   KM++A+ +++ M   GI PN+  Y TL+ GY +  +      
Sbjct: 533 HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLS 592

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           L + M +KG++P      ++ D     G    AK
Sbjct: 593 LFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 626



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/369 (21%), Positives = 177/369 (47%), Gaps = 7/369 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  IFN + + G +P ++TY T++AAL R  +    +   +++   G+ PD   +
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAY 469

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +I      G++ +A ++  ++ ++G +     + ++I     +G+  ++  +  L + 
Sbjct: 470 HCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDL-TV 528

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  + P+   YN+L+  +C    +E+A  V   MV++GI+P+ V Y TL   Y + G   
Sbjct: 529 NVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRID 588

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
               +  EM    ++P+     II+ G  + G    A    + M E  +  N   ++ ++
Sbjct: 589 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 648

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +G      +   D+A+ L +E     VK D++T +T++        + + +++F  + ++
Sbjct: 649 RGLF---KNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 705

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+ P    +SI+    ++ G  ++AE + +SM+  G  P+  +   V+       ++ RA
Sbjct: 706 GLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 765

Query: 365 MSIYEKMCE 373
            +   K+ E
Sbjct: 766 GAYLSKIDE 774



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/438 (20%), Positives = 182/438 (41%), Gaps = 49/438 (11%)

Query: 6   GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSI-------LSLISKVEKD 58
           G  +P EAH + + L   G           +AAL R     +        ++L ++    
Sbjct: 43  GTLRPEEAHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGPALAVALFNRAASR 102

Query: 59  G-----MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVG 113
                 + P S  +  +++ C+ +   + A+  F ++  +G +      + L+KG+    
Sbjct: 103 AQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAK 162

Query: 114 KPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG--IQPDAV 171
           + +E+L +L   + +    P+  +YNIL+++ C++    +A +++  M   G    PD V
Sbjct: 163 RTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVV 222

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
            YNT                                   ++ G+ KEG++  A      M
Sbjct: 223 AYNT-----------------------------------VIDGFFKEGDVNKACDLFKEM 247

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
            +  + P+LV ++S++      +  D  +  L  M   GV PD  T++ ++  +SS G  
Sbjct: 248 VQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQW 307

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            +   +F +M +  I PD+   + L     + G+ ++A  +  +M   G +P+V  +T +
Sbjct: 308 KEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIM 367

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           ++G+     +     +++ M   GI P + T+  L+  Y       +A  +   M + GV
Sbjct: 368 LNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGV 427

Query: 412 RPKKSTIQLVADSWRAIG 429
           +P   T   V  +   IG
Sbjct: 428 KPHVVTYMTVIAALCRIG 445



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 113/241 (46%), Gaps = 3/241 (1%)

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD-GVDK 261
           P   T  I++    +    E A+ F  ++    +  + ++ + L+KGF + K +D  +D 
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG--IEPDIHVFSILAKG 319
            L    E G  PDV +++ ++ +  + G  G+  ++   M + G    PD+  ++ +  G
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           + + G+  KA  +   M + G+ P++V +++V+   C A  M +A +   +M   G+ P+
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             TY  L++GY    Q   A  + + M  + + P    +  +  S    G  +EA+ V  
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 440 S 440
           +
Sbjct: 351 T 351



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/296 (21%), Positives = 132/296 (44%), Gaps = 4/296 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  +A  IF+  +  G  P  + Y  L+       + +  L +   +   G+
Sbjct: 508 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 567

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ + +  ++N   + G +DE + +F++M   G KP+T  YN +I G    G+   +  
Sbjct: 568 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M++   +  N  TY+I++R        +EA  +  ++ A  ++ D +T NT+    
Sbjct: 628 KFHEMTE-SGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 686

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q      A+ +   +  + + P   T  I+++   KEG +E+A      M+     P+ 
Sbjct: 687 FQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDS 746

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            + N +++  L   +       L+ ++E     + +T   ++D +SS    G C+E
Sbjct: 747 RLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSK---GTCRE 799



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 109/256 (42%), Gaps = 36/256 (14%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  +F+ ++  G  P ++ Y TLV    +  R    LSL  ++ + G+KP +IL+
Sbjct: 550 GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY 609

Query: 68  NAMINACSESGNV-----------------------------------DEAMKIFQKMKD 92
           N +I+   E+G                                     DEA+ +F++++ 
Sbjct: 610 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRA 669

Query: 93  SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIE 152
              K    T NT+I G     + EE+  L   +S+   V P   TY+I++     +  +E
Sbjct: 670 MNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV-PCAVTYSIMITNLIKEGLVE 728

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           EA ++   M  +G +PD+   N + R   +  E  RA   L ++          T  ++V
Sbjct: 729 EAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLV 788

Query: 213 SGYCKEGNMEDAMRFL 228
             +  +G   + +RFL
Sbjct: 789 DLFSSKGTCREQIRFL 804



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 11/185 (5%)

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV----KAGIEPDIHVFSILAKGYVRAGE 325
           G++ D +  S ++  +  A    +  E  D ++    + G  PD+  ++IL K     G+
Sbjct: 143 GLRVDAIIASHLLKGFCEAK---RTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGK 199

Query: 326 PQKAESILTSMRKYGV--HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
             +A+ +L  M + G    P+VV + TVI G+     + +A  ++++M + GI P+L TY
Sbjct: 200 SGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTY 259

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            +++    +A+   +AE  L+ M  KGV P   T   +   + + G  +EA RV K  E 
Sbjct: 260 SSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFK--EM 317

Query: 444 DRQSM 448
            RQS+
Sbjct: 318 RRQSI 322


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 221/456 (48%), Gaps = 1/456 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E+G  P   TYT + A L R KR         +++K G+KPD    +A+I+     G++D
Sbjct: 291 EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 350

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           E ++I   M   G      TYN LI G    GK E++ ++L+ M      KPN RT+ +L
Sbjct: 351 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVT-LGCKPNSRTFCLL 409

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +  +C ++++  A  ++ +M    + P AV+Y  +        +   A ++L +M  + +
Sbjct: 410 IEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL 469

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           +PN     I++  Y  EG +E+A R L  M    V P++  +N++I         +    
Sbjct: 470 KPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 529

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            L  ++  G+KPD VTF   +  +S  G M +  + FD+M+  G+ P+  ++++L  G+ 
Sbjct: 530 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 589

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           +AG   +A SI   +   GV P+V   +  I G     ++Q A+ ++ ++ E G+ P++ 
Sbjct: 590 KAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 649

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY +L+ G+ +  +  +A EL   M  KG+ P       + D     G  + A+++    
Sbjct: 650 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 709

Query: 442 EEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIP 477
            E      +      ++   + +N++ + S F ++P
Sbjct: 710 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 745



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/428 (25%), Positives = 213/428 (49%), Gaps = 1/428 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           ++N +++      + TYT LV AL +    +    ++ ++++ G+ P+  +++ +I    
Sbjct: 215 VYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMC 274

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G++DEA+++ + M + G  P T TY  +  G     +  E+    + M Q   +KP+ 
Sbjct: 275 QVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEM-QKTGLKPDY 333

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
              + L+  +  +  I+E   +   MV+ GI  + +TYN L     ++G+  +A ++L  
Sbjct: 334 NACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKG 393

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M     +PN RT  +++ GYC+E NM  A+  L  M++  + P+ V + ++I G    KD
Sbjct: 394 MVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKD 453

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
               +K L  M   G+KP+VV +S ++ A++S G + + + + D M  +G+ PDI  ++ 
Sbjct: 454 LSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNA 513

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           +     +AG+ ++A + L  ++  G+ P+ V F   I G+    KM  A   +++M + G
Sbjct: 514 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 573

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           + PN   Y  L+ G+ +A     A  + + +   GV P   T           G  +EA 
Sbjct: 574 LMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 633

Query: 436 RVLKSAEE 443
           +V    +E
Sbjct: 634 KVFSELKE 641



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 225/492 (45%), Gaps = 38/492 (7%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAAL--------------------------- 39
           +G   E   I + ++  G    LITY  L+  L                           
Sbjct: 346 EGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRT 405

Query: 40  --------TRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
                    R+      L L+ ++EK  + P ++ + AMIN      ++  A K+ +KM 
Sbjct: 406 FCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMT 465

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
            SG KP    Y+ LI  Y + G+ EE+ +LL  MS    V P+   YN ++        +
Sbjct: 466 FSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSC-SGVAPDIFCYNAIISCLSKAGKM 524

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           EEA   + ++   G++PDAVT+      Y++ G+   A +   EM ++ + PN     ++
Sbjct: 525 EEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVL 584

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           ++G+ K GN+ +A+    R+  L V P++   ++ I G L         K  + ++E G+
Sbjct: 585 INGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGL 644

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            PDV T+S+++  +   G + K  E+ D+M   GI P+I +++ L  G  ++G+ Q+A  
Sbjct: 645 VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARK 704

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +   M + G+ P+ V ++T+I G+C +  +  A S++ +M   G+ P+   Y  L+ G  
Sbjct: 705 LFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCC 764

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
           +     +A  L + M +KG     S   L+ D +      +EA ++ +     +Q MP+ 
Sbjct: 765 KEGDMEKAMNLFREMLQKGFATTLSFNTLI-DGYCKSCKIQEASQLFQEMIA-KQIMPDH 822

Query: 452 KDEIAVESIHRK 463
                V   H K
Sbjct: 823 VTYTTVIDWHCK 834



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 206/418 (49%), Gaps = 8/418 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  EA  + + +   G  P +  Y  +++ L++  + +   + + +++  G+KPD++ 
Sbjct: 486 EGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVT 545

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F A I   S++G + EA K F +M D G  P    Y  LI G+   G   E+L + + + 
Sbjct: 546 FGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRL- 604

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
               V P+ +T +  +        ++EA  V  ++   G+ PD  TY++L   + + GE 
Sbjct: 605 HALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEV 664

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A ++  EM    + PN      +V G CK G+++ A +    M E  + P+ V ++++
Sbjct: 665 EKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTM 724

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           I G+     S+ V +A +L  E    GV+P    ++ ++      G M K   +F +M++
Sbjct: 725 IDGYC---KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ 781

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G    +  F+ L  GY ++ + Q+A  +   M    + P+ V +TTVI   C A KM+ 
Sbjct: 782 KGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEE 840

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           A  ++++M E  +  +  TY +L++GY +  Q      L + M  KGV+P + T  LV
Sbjct: 841 ANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLV 898



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 205/438 (46%), Gaps = 8/438 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA   F+ +++ G  P    YT L+    +       LS+  ++   G+ PD    
Sbjct: 557 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTC 616

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +A I+   ++G V EA+K+F ++K+ G  P   TY++LI G+   G+ E++ +L   M  
Sbjct: 617 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 676

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K + PN   YN LV   C    I+ A  +   M   G++PD+VTY+T+   Y +     
Sbjct: 677 -KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVA 735

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +  EM +  V+P+      +V G CKEG+ME AM     M +      L  FN+LI
Sbjct: 736 EAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLI 794

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            G+     S  + +A  L +E   K   PD VT++T++D    AG M +   +F +M + 
Sbjct: 795 DGYCK---SCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQER 851

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
            +  D   ++ L  GY + G+  +  ++   M   GV P+ V +  VI   C    +  A
Sbjct: 852 NLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEA 911

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             + +++   G+      ++ L+    + +    A +LL  M E G++P  +    +  S
Sbjct: 912 FKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRS 971

Query: 425 WRAIGLAREAKRVLKSAE 442
           +   G   EA RV +  +
Sbjct: 972 FHEAGKMDEATRVFEGVK 989



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 190/386 (49%), Gaps = 2/386 (0%)

Query: 4    LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            L+  G+  EA  +F+ L E+G  P + TY++L++   +Q   +    L  ++   G+ P+
Sbjct: 623  LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 682

Query: 64   SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              ++NA+++   +SG++  A K+F  M + G +P + TY+T+I GY       E+  L  
Sbjct: 683  IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 742

Query: 124  LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
             M   K V+P+   YN LV   C +  +E+A N+  +M+  G     +++NTL   Y + 
Sbjct: 743  EMPS-KGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKS 800

Query: 184  GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
             +   A Q+  EM   Q+ P+  T   ++  +CK G ME+A      M+E  +  + V +
Sbjct: 801  CKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTY 860

Query: 244  NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
             SL+ G+  +  S  V      M   GVKPD VT+  ++ A      + +  ++ D++V 
Sbjct: 861  TSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVG 920

Query: 304  AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
             G+     +  +L     +  +  +A  +L  M + G+ P++    T++  +  A KM  
Sbjct: 921  KGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDE 980

Query: 364  AMSIYEKMCEIGINPNLKTYETLLWG 389
            A  ++E +  +G+ P+  T   L+ G
Sbjct: 981  ATRVFEGVKSLGLVPDTTTLIDLVNG 1006



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 169/337 (50%), Gaps = 10/337 (2%)

Query: 4    LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            L   G    A  +F+ + E+G  P  +TY+T++    + +      SL  ++   G++P 
Sbjct: 693  LCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPH 752

Query: 64   SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            S ++NA+++ C + G++++AM +F++M   G   TT ++NTLI GY    K +E+ +L Q
Sbjct: 753  SFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQ 811

Query: 124  LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
             M   K + P+  TY  ++   C    +EEA  +  +M    +  D VTY +L   Y + 
Sbjct: 812  EMIA-KQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKL 870

Query: 184  GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV-- 241
            G++     +  +M    V+P+E T G+++  +CKE N+ +A    +++++  V   ++  
Sbjct: 871  GQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEA----FKLRDEVVGKGMLTK 926

Query: 242  --VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
              + + LI      +D     K L  M E G+KP +   +T++ ++  AG M +   +F+
Sbjct: 927  GTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFE 986

Query: 300  DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
             +   G+ PD      L  G +   + + A +++  +
Sbjct: 987  GVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 1023



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/422 (22%), Positives = 182/422 (43%), Gaps = 8/422 (1%)

Query: 61  KPDSILF-----NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKP 115
           K DSIL      N+++    + G ++   K++  M D+       TY  L+      G  
Sbjct: 185 KNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDL 244

Query: 116 EESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
             + ++L  M + K + PN+  Y++++   C    I+EA  +   M   G+ P+  TY  
Sbjct: 245 RGAKRVLIEMDE-KGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTI 303

Query: 176 LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
           +     +      A+    EMQ   ++P+   C  ++ G+ +EG++++ +R    M    
Sbjct: 304 ITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCG 363

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           +  NL+ +N LI G       +   + L  M   G KP+  TF  +++ +     MG+  
Sbjct: 364 IPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRAL 423

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           E+ D+M K  + P    +  +  G     +   A  +L  M   G+ PNVV+++ +I  +
Sbjct: 424 ELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAY 483

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
            +  +++ A  + + M   G+ P++  Y  ++    +A +   A   L  ++ +G++P  
Sbjct: 484 ASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDA 543

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQ-NLSASNSTFL 474
            T       +   G   EA +       D   MPN      + + H K  NL  + S F 
Sbjct: 544 VTFGAFILGYSKTGKMTEAAKYFDEM-LDHGLMPNNPLYTVLINGHFKAGNLMEALSIFR 602

Query: 475 QI 476
           ++
Sbjct: 603 RL 604



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 156/338 (46%), Gaps = 1/338 (0%)

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
            ++ LI  Y  +G  +E+  +  +   D  +    R  N L++       +E  W V   
Sbjct: 160 VFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRC-NSLLKDLLKCGMMELFWKVYNG 218

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           M+ + +  D  TY  L  A  + G+   A+++L EM    + PNE    +++ G C+ G+
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           +++A+     M E  + PN   +  +  G    K  +        M++ G+KPD    S 
Sbjct: 279 IDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSA 338

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++D +   G + +   I D MV  GI  ++  +++L  G  + G+ +KA  IL  M   G
Sbjct: 339 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLG 398

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
             PN   F  +I G+C    M RA+ + ++M +  + P+  +Y  ++ G    K    A 
Sbjct: 399 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLAN 458

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           +LL+ M   G++P      ++  ++ + G   EA+R+L
Sbjct: 459 KLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLL 496


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/474 (25%), Positives = 226/474 (47%), Gaps = 36/474 (7%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L   G PH A   +  ++         T   +V +  +   F    ++IS++EK  +
Sbjct: 129 LAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCV 188

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD +  N +I+A   +G+VD A+ +   M + G KP   TYN+++KG     + +++ +
Sbjct: 189 FPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKE 248

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M Q  +V P+ R++NIL+  +C    ++EA     +M    + PD V+++ L   +
Sbjct: 249 VFRTMDQ-CSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLF 307

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++ GE   A   L EM+   + P+     +++ G+C+ G+M +A+R    M      P++
Sbjct: 308 SRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDV 367

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGV----------------------------- 271
           V +N+L+ G          +K L  MEE GV                             
Sbjct: 368 VTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDT 427

Query: 272 ------KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
                 +PDVVT+++++D     G + K  E++DDM    I P+   +SIL   +   G+
Sbjct: 428 LLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQ 487

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            + A   L  M K G  PN+  + ++I G+C +  +++     +KM +  + P+L T+ T
Sbjct: 488 VEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNT 547

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           L+ GY + +    A  +  +ME++ VRP   T  ++ + +   G  ++A RV K
Sbjct: 548 LIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFK 601



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 207/419 (49%), Gaps = 1/419 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           + + +   G +P ++TY +++  L + +RF     +   +++  + PD   FN +I    
Sbjct: 214 LVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFC 273

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
             G V EA+K +++M+     P   +++ LI  +   G+ + +   L+ M +   + P+ 
Sbjct: 274 RVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREM-KGLGLVPDG 332

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
             Y +++  +C   S+ EA  V  +MV  G  PD VTYNTL     +      AE++L E
Sbjct: 333 VIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNE 392

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M+   V P+  T   ++ GYC++GN E+A++    +    + P++V +NSLI G     D
Sbjct: 393 MEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGD 452

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
               ++    M    + P+ +T+S ++D+    G +       D+MVK G  P+I  ++ 
Sbjct: 453 LAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNS 512

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           + KGY R+G  +K +  L  MR+  V P+++ F T+I G+     M  A +++  M +  
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEM 572

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           + P+  TY  ++ G+ E      A  + + M + G+ P + T   + +     G +++A
Sbjct: 573 VRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQA 631



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 196/388 (50%), Gaps = 11/388 (2%)

Query: 1   MNILVGK----GKPHEAHYIFNCLIEEGHR---PTLITYTTLVAALTRQKRFKSILSLIS 53
            NIL+G     G+  EA   +    E  HR   P +++++ L+   +R+       + + 
Sbjct: 265 FNILIGGFCRVGEVKEAVKFYK---EMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLR 321

Query: 54  KVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVG 113
           +++  G+ PD +++  +I     +G++ EA+++  +M   GC P   TYNTL+ G     
Sbjct: 322 EMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQH 381

Query: 114 KPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY 173
           +  ++ KLL  M +++ V P+  T+  L+  +C + + E A  +   ++   ++PD VTY
Sbjct: 382 RLLDAEKLLNEM-EERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTY 440

Query: 174 NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
           N+L     + G+  +A ++  +M   ++ PN  T  I++  +C++G +EDA  FL  M +
Sbjct: 441 NSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVK 500

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
               PN+  +NS+IKG+    +     + L  M +  V PD++TF+T++  +     M  
Sbjct: 501 KGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHG 560

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
              +F+ M K  + PD   ++++  G+   G  Q A  +   M   G+ P+   + ++I+
Sbjct: 561 AFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLIN 620

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           G   A   ++A  ++++M   G  P+ K
Sbjct: 621 GHVTAGNSKQAFQLHDEMIHRGFAPDDK 648



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/448 (24%), Positives = 212/448 (47%), Gaps = 25/448 (5%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTT--LVAALTR-------QKRFKSILSLISKVEKDG 59
           KP EA   F  L++  HR  +    +  L+A L+R       Q+ ++ +LS  S+V    
Sbjct: 102 KPREAFEAFRLLLD--HRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEV---- 155

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
              ++   N M+++  ++   D A  +  +M+     P   T+N LI      G  + ++
Sbjct: 156 ---NAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAI 212

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            L+  M+ ++ +KP   TYN +++  C     ++A  V   M    + PD  ++N L   
Sbjct: 213 ALVDSMA-NRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGG 271

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + + GE   A +   EMQ+  V P+  +   ++  + + G M+ A  +L  MK L + P+
Sbjct: 272 FCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPD 331

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            V++  +I GF     +  + +AL + +E   FG  PDVVT++T+++       +   ++
Sbjct: 332 GVIYTMVIGGFCR---AGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEK 388

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           + ++M + G+ PD+  F+ L  GY R G  + A  +  ++ +  + P+VV + ++I G C
Sbjct: 389 LLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMC 448

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
               + +A  +++ M    I PN  TY  L+  + E  Q   A   L  M +KG  P   
Sbjct: 449 RKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIR 508

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEED 444
           T   +   +   G  ++ ++ L+   +D
Sbjct: 509 TYNSIIKGYCRSGNVKKGQQFLQKMRQD 536



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/405 (24%), Positives = 187/405 (46%), Gaps = 7/405 (1%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F  + +    P + ++  L+    R    K  +    +++   + PD + F+ +I
Sbjct: 245 KAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLI 304

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
              S  G +D A    ++MK  G  P    Y  +I G+   G   E+L++   M      
Sbjct: 305 GLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMV-GFGC 363

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  TYN L+   C ++ + +A  ++ +M   G+ PD  T+ TL   Y + G    A Q
Sbjct: 364 LPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQ 423

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +   +   ++RP+  T   ++ G C++G++  A      M   E+ PN + ++ LI    
Sbjct: 424 LFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHC 483

Query: 252 DIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
              +   V+ A   ++E    G  P++ T+++I+  +  +G + K Q+    M +  + P
Sbjct: 484 ---EKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFP 540

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D+  F+ L  GY++      A ++   M K  V P+ V +  +I+G+     MQ A  ++
Sbjct: 541 DLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVF 600

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           + M + GI P+  TY +L+ G+  A    +A +L   M  +G  P
Sbjct: 601 KGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAP 645



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 98/461 (21%), Positives = 167/461 (36%), Gaps = 119/461 (25%)

Query: 94  GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK--------------PNDRTYN 139
           G +P+T+            G+  E   LL  MS+ +                 P  + ++
Sbjct: 32  GARPSTAALAAAATAAAAAGRASECQSLLLRMSRRRGASRREIVSSLLASSPTPQPQVFD 91

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           +L+R +       EA+     ++   +   A   N L    ++ G  + A++    + ++
Sbjct: 92  LLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSS 151

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
               N  T  I+V  YCK       + F                             DG 
Sbjct: 152 DSEVNAYTLNIMVHSYCK------TLEF-----------------------------DGA 176

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAG---------------------------LMG 292
           D  ++ ME+  V PDVVT + ++DA   AG                           L G
Sbjct: 177 DTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKG 236

Query: 293 KC--------QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK---------------- 328
            C        +E+F  M +  + PD+  F+IL  G+ R GE ++                
Sbjct: 237 LCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPD 296

Query: 329 -------------------AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
                              A + L  M+  G+ P+ V++T VI G+C A  M  A+ + +
Sbjct: 297 VVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRD 356

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           +M   G  P++ TY TLL G  +  +   AE+LL  MEE+GV P   T   +   +   G
Sbjct: 357 EMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQG 416

Query: 430 LAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASN 470
               A ++  +    R           ++ + RK +L+ +N
Sbjct: 417 NFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKAN 457


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 211/454 (46%), Gaps = 35/454 (7%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK-- 61
           L   G  H+A  +F+ ++     P L  +  ++ AL ++        L+ KV + GM   
Sbjct: 161 LYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSIN 220

Query: 62  --------------------------------PDSILFNAMINACSESGNVDEAMKIFQK 89
                                           PD + +N +I    +     EAM   ++
Sbjct: 221 LFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRR 280

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M + GC P   TYNT+I GY  +   +E+ +LL+  +  K   P+  TY  L+   C++ 
Sbjct: 281 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLK-DAVFKGFVPDQVTYCSLINGLCAEG 339

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            +E A  +  +  A GI+PD V YN+L +     G    A Q++ EM      P+ +T  
Sbjct: 340 DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 399

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
           I+++G CK GN+ DA   +         P++  FN+LI G+      D   + +  M E+
Sbjct: 400 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 459

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G+ PD +T++++++    AG + +  E F +M+  G  P+   ++IL + + R+ + ++A
Sbjct: 460 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 519

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             ++  M + G+HP+ V F T+I G+C    ++ A  +++K+ E G +    T+ TL+  
Sbjct: 520 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGA 579

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           +        AE++   M  KG R    T +++ D
Sbjct: 580 FSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLID 613



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 182/371 (49%), Gaps = 5/371 (1%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +    + +G  P  +TY +L+  L  +   +  L L ++ +  G+KPD +++N+++
Sbjct: 308 EATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLV 367

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ--LMSQDK 129
                 G +  A+++  +M + GC P   TYN +I G   +G   ++  ++   +M   K
Sbjct: 368 KGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIM---K 424

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
              P+  T+N L+  +C +  ++ A  +V +M   GI PD +TYN++     + G+    
Sbjct: 425 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEV 484

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
            +   EM      PN  T  I++  +C+   ME+A + + +M +  +HP+ V FN+LI G
Sbjct: 485 NETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG 544

Query: 250 FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
           F    D +G       +EE G      TF+T++ A+S    M   ++IFD+M+  G   D
Sbjct: 545 FCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 604

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
            + + +L  G  +     +A   L  M K G  P++  F  VI+      ++ +A+ I  
Sbjct: 605 SYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIH 664

Query: 370 KMCEIGINPNL 380
            M +IG+ P +
Sbjct: 665 IMVKIGVVPEV 675



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 208/447 (46%), Gaps = 13/447 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ LV      +AH ++  ++  G  P L T+T  + +     R    L L+  +   G 
Sbjct: 92  MDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG- 150

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
              ++ +  ++      G+  +A ++F +M  +   P  + +N ++      G   E+  
Sbjct: 151 ---AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGL 207

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  + Q + +  N  TYNI +R  C    + EA  +V  M A  + PD VTYNTL R  
Sbjct: 208 LLGKVIQ-RGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGL 265

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A   L  M N    P++ T   I+ GYCK   +++A   L         P+ 
Sbjct: 266 CKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQ 325

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V + SLI G     D   V++AL L  E    G+KPD+V +++++      GL+    ++
Sbjct: 326 VTYCSLINGLCAEGD---VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQV 382

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            ++M + G  PDI  ++I+  G  + G    A  ++      G  P+V  F T+I G+C 
Sbjct: 383 MNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCK 442

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            +K+  A+ + E+M E GI P+  TY ++L G  +A +     E  Q M  KG  P   T
Sbjct: 443 RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPIT 502

Query: 418 IQLVADSW-RAIGLAREAKRVLKSAEE 443
             ++ +++ R+  +   +K ++K ++E
Sbjct: 503 YNILIENFCRSNKMEEASKVIVKMSQE 529



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/506 (23%), Positives = 223/506 (44%), Gaps = 26/506 (5%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            +PH A  +   L   G     + Y T+V  L           L  ++    + P+   F
Sbjct: 134 ARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAF 189

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +++A  + G+V EA  +  K+   G      TYN  I+G    G+  E+++L+  M  
Sbjct: 190 NKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMR- 248

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                P+  TYN L+R  C K+  +EA + + +M+  G  PD  TYNT+   Y +     
Sbjct: 249 -AYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQ 307

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++L +       P++ T   +++G C EG++E A+      +   + P++VV+NSL+
Sbjct: 308 EATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLV 367

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           KG           + +  M E G  PD+ T++ +++     G +     + +D +  G  
Sbjct: 368 KGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYL 427

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+  F+ L  GY +  +   A  ++  M +YG+ P+ + + +V++G C A K+      
Sbjct: 428 PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNET 487

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           +++M   G +PN  TY  L+  +  + +   A +++  M ++G+ P   +   +   +  
Sbjct: 488 FQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCR 547

Query: 428 IGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSEHNGS 487
            G    A  + +  EE                    +  SA+  TF  + G  S + N  
Sbjct: 548 NGDLEGAYLLFQKLEE--------------------KGYSATADTFNTLIGAFSGKLNMH 587

Query: 488 SAAKIRSQIVLRSDTVWTATKSLFVN 513
            A KI  +++ +     + T  + ++
Sbjct: 588 MAEKIFDEMLSKGHRADSYTYRVLID 613



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 124/518 (23%), Positives = 221/518 (42%), Gaps = 57/518 (11%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G   EA  +   +I+ G    L TY   +  L    R    + L+     DGM
Sbjct: 193 LHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLV-----DGM 247

Query: 61  K----PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           +    PD + +N +I    +     EAM   ++M + GC P   TYNT+I GY  +   +
Sbjct: 248 RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQ 307

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           E+ +LL+  +  K   P+  TY  L+   C++  +E A  +  +  A GI+PD V YN+L
Sbjct: 308 EATELLK-DAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSL 366

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV------------------------ 212
            +     G    A Q++ EM      P+ +T  I++                        
Sbjct: 367 VKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY 426

Query: 213 -----------SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
                       GYCK   ++ A++ + RM E  + P+ + +NS++ G       + V++
Sbjct: 427 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNE 486

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
               M   G  P+ +T++ +++ +  +  M +  ++   M + G+ PD   F+ L  G+ 
Sbjct: 487 TFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 546

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           R G+ + A  +   + + G       F T+I  +   + M  A  I+++M   G   +  
Sbjct: 547 RNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSY 606

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS-------WRAIGLAREA 434
           TY  L+ G  +     RA   L  M +KG  P  ST   V +S       ++A+G+    
Sbjct: 607 TYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIM 666

Query: 435 KRVLKSAEEDRQSMPNKKDEIA-----VESIHRKQNLS 467
            ++    E     +   K EIA     VE + +K ++S
Sbjct: 667 VKIGVVPEVVDTILNADKKEIAAPKILVEDLMKKGHIS 704



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/387 (22%), Positives = 155/387 (40%), Gaps = 43/387 (11%)

Query: 60  MKPDSI--LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
           + P +I  L+ A I A + +G + +A+  F++M    C P    YN ++    +    ++
Sbjct: 44  LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 103

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           + K+   M     V P+  T+ I +R++C       A  ++  +   G    AV Y T+ 
Sbjct: 104 AHKVYVRMLA-AGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVV 158

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
                +G T+ A Q+  +M +  V PN      ++   CK G++ +A   L ++ +  + 
Sbjct: 159 CGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMS 218

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
            NL  +N  I+G                  E G  P+ V     M A++           
Sbjct: 219 INLFTYNIWIRGLC----------------EAGRLPEAVRLVDGMRAYAV---------- 252

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
                     PD+  ++ L +G  +   PQ+A   L  M   G  P+   + T+I G+C 
Sbjct: 253 ----------PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCK 302

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              +Q A  + +     G  P+  TY +L+ G        RA EL    + KG++P    
Sbjct: 303 ISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVV 362

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEED 444
              +       GL   A +V+    E+
Sbjct: 363 YNSLVKGLCLQGLILHALQVMNEMAEE 389


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 200/403 (49%), Gaps = 3/403 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++E G   T +T   L+    +Q R    LS I +   +G +PD   +N ++N   + G+
Sbjct: 264 MVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGH 323

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-QLMSQDKNVKPNDRTY 138
              AM++   M   G  P   TYN+LI G   +G+ EE++K+L Q++S+D    PN  TY
Sbjct: 324 AKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD--CSPNAVTY 381

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           N ++ + C +N ++EA  +   + + GI PD  T+N+L +          A  +  EM+ 
Sbjct: 382 NAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKG 441

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
              RP+E T  +++   C    +E+A+  L  M+      N+V++N+LI GF   K  + 
Sbjct: 442 KGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEE 501

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
            ++    ME  GV  D VT++T++D    +  +    ++ D M+  G+ PD   ++ L  
Sbjct: 502 AEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLT 561

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
            + + G+ +KA  I+ +M   G +P++V + T+ISG C A ++Q A  +   +   G+  
Sbjct: 562 HFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVL 621

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
               Y  ++    +  +   A  L + M +K   P   T ++V
Sbjct: 622 TPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIV 664



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 213/445 (47%), Gaps = 7/445 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+LV   K        + ++    R  + T+  L+ AL +  + +  + ++ ++   G+
Sbjct: 175 LNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGL 234

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   F  ++    E GN+D A++I ++M + GC  T  T N LI G+   G+ +++L 
Sbjct: 235 SPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALS 294

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            +Q  +  +  +P+  TYN LV   C     + A  VV  M+  G+ PD  TYN+L    
Sbjct: 295 FIQ-EAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGL 353

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + GE   A ++L +M +    PN  T   I+S  CKE  +++A      +    + P++
Sbjct: 354 CKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDV 413

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             FNSLI+G      S     A+ L EE    G +PD  T++ ++D+  S+  + +   +
Sbjct: 414 CTFNSLIQGLCL---SSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNL 470

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
             +M   G   ++ +++ L  G+ +    ++AE I   M   GV  + V + T+I G C 
Sbjct: 471 LKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCK 530

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           + +++ A  + ++M   G+ P+  TY +LL  + +     +A +++Q M   G  P   T
Sbjct: 531 SKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVT 590

Query: 418 IQLVADSWRAIGLAREAKRVLKSAE 442
              +       G  + A R+L+S +
Sbjct: 591 YATLISGLCKAGRVQVASRLLRSIQ 615



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 208/415 (50%), Gaps = 1/415 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P    Y  L+  L    + K + S  S + +  ++ D   FN +I A  ++  V  A+ 
Sbjct: 165 KPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAIL 224

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           + ++M   G  P  +T+ T+++GY   G  + +L++ + M +       D T N+L+  +
Sbjct: 225 MMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVE-YGCPCTDVTVNVLINGF 283

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C +  I++A + + + V+ G +PD  TYNTL     + G    A +++  M    + P+ 
Sbjct: 284 CKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDI 343

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   ++SG CK G +E+A++ L +M   +  PN V +N++I         D   +   L
Sbjct: 344 YTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARL 403

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           +   G+ PDV TF++++     +       ++F++M   G  PD   +++L      + +
Sbjct: 404 LTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRK 463

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            ++A ++L  M   G   NVV++ T+I G+C   +++ A  I+++M   G++ +  TY T
Sbjct: 464 LEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNT 523

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
           L+ G  ++K+   A +L+  M  +G+RP K T   +   +   G  ++A  ++++
Sbjct: 524 LIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQT 578



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 201/422 (47%), Gaps = 7/422 (1%)

Query: 25  HRPTLITYTTLVAALTRQKRFKSILSLISKVEKD-GMKPDSILFNAMINACSESGNVDEA 83
           H P   T   L+  L RQ    + L + +   K     P S ++  ++    ++G+ +  
Sbjct: 57  HLPPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYM 116

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            ++ ++MK SGC+     +   ++ YG     +E + ++++M  +  +KP+ R YN+L+ 
Sbjct: 117 RRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLN 176

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
                N ++   +    MV   I+ D  T+N L +A  +  +   A  M+ EM +  + P
Sbjct: 177 VLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSP 236

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +E T   I+ GY + GN++ A+R   +M E       V  N LI GF        +D+AL
Sbjct: 237 DETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCK---QGRIDQAL 293

Query: 264 TLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           + ++E    G +PD  T++T+++     G      E+ D M+  G++PDI+ ++ L  G 
Sbjct: 294 SFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGL 353

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            + GE ++A  IL  M      PN V +  +IS  C   ++  A  I   +   GI P++
Sbjct: 354 CKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDV 413

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            T+ +L+ G   +     A +L + M+ KG RP + T  ++ DS  +     EA  +LK 
Sbjct: 414 CTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKE 473

Query: 441 AE 442
            E
Sbjct: 474 ME 475



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 200/427 (46%), Gaps = 8/427 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G+  +A       + EG RP   TY TLV  L +    K  + ++  +   G+
Sbjct: 280 INGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGL 339

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +N++I+   + G ++EA+KI  +M    C P   TYN +I       + +E+ +
Sbjct: 340 DPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATE 399

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + +L++  K + P+  T+N L++  C  ++ + A ++  +M   G +PD  TYN L  + 
Sbjct: 400 IARLLTS-KGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSL 458

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
               +   A  +L EM+ N    N      ++ G+CK   +E+A      M+   V  + 
Sbjct: 459 CSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDS 518

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +N+LI G      S  V+ A  LM++    G++PD  T+++++  +   G + K  +I
Sbjct: 519 VTYNTLIDGLC---KSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADI 575

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
              M  +G  PDI  ++ L  G  +AG  Q A  +L S++  G+      +  VI     
Sbjct: 576 VQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFK 635

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW-RAEELLQVMEEKGVRPKKS 416
             +   AM ++ +M +    P+  TY+ +  G      P   A +    M E+G  P+ S
Sbjct: 636 RNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFS 695

Query: 417 TIQLVAD 423
           +  ++A+
Sbjct: 696 SFVMLAE 702


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 198/410 (48%), Gaps = 7/410 (1%)

Query: 26  RPTLI-TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAM 84
           RPT    Y  L+ AL R+    ++  +   + KDG++P+   +N ++ A  ++  V  A 
Sbjct: 130 RPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAAR 189

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
           K+  +M   GC P   TY T++     +G+ +E+ ++L          P   +YN ++ A
Sbjct: 190 KMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSA------APPVAASYNAVILA 243

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
            C +  ++E + VV  MV  G+QP+ +TY T+  A+ + GE   A  +L  M      PN
Sbjct: 244 LCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPN 303

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   +V G   +G + DA+     M      P+ V +N LI+G   + D  G    L 
Sbjct: 304 VATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLN 363

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            ME+ G  P+  T+ST++D +S AG +     I++DM ++G +P++ V++ +   + +  
Sbjct: 364 DMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKL 423

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              +AES++  M      PN V F T+I   CN  ++ RA+ ++ +M   G  PN +TY 
Sbjct: 424 MFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYN 483

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
            LL G         A +++  M+  G+     T   V      + + REA
Sbjct: 484 ELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREA 533



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 174/370 (47%), Gaps = 1/370 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G +P +ITYTT+V A  +    +   ++++++   G  P+   F A++      G 
Sbjct: 260 MVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGR 319

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V +A+ +++ M   G  P+T +YN LI+G  +VG  + +  +L  M Q     PN RTY+
Sbjct: 320 VHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQ-HGCFPNARTYS 378

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+  +     ++ A ++   M  SG +P+ V Y  +   + +     +AE ++ +M   
Sbjct: 379 TLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVE 438

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              PN  T   ++   C    +  A+   + M+     PN   +N L+ G     +    
Sbjct: 439 NCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDA 498

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            + +  M+  G++  +VT++T++       +  +       M+  GI+PD   F+ +   
Sbjct: 499 LQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHA 558

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y + GE + A  IL +M       N++++T +++  CN  K++ AM    KM   GI PN
Sbjct: 559 YCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPN 618

Query: 380 LKTYETLLWG 389
             T+  L+ G
Sbjct: 619 TVTWNVLVRG 628



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 95/419 (22%), Positives = 183/419 (43%), Gaps = 6/419 (1%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           ++G +P + TY  LV AL +  R  +   ++ ++   G  PD + +  +++A    G VD
Sbjct: 162 KDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVD 221

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           EA ++      S   P  ++YN +I       + +E   ++  M   + ++PN  TY  +
Sbjct: 222 EATEVL-----SAAPPVAASYNAVILALCREFRMQEVFAVVGDMV-GRGLQPNVITYTTI 275

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           V A+C    +  A  ++ +MV +G  P+  T+  L       G  + A  M   M     
Sbjct: 276 VNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGW 335

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            P+  +  +++ G C  G+++ A   L  M++    PN   +++LI GF    D DG   
Sbjct: 336 APSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAIS 395

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
               M   G KP+VV ++ ++  +    +  + + + D M+     P+   F+ L +   
Sbjct: 396 IWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLC 455

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
                 +A  +   MR++G  PN   +  ++ G         A+ +  +M   GI  +L 
Sbjct: 456 NCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLV 515

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
           TY T++ G  + +    A   +  M  +G++P   T   +  ++   G  R A  +L +
Sbjct: 516 TYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGA 574



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/407 (24%), Positives = 169/407 (41%), Gaps = 39/407 (9%)

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           A +   + +G+VD      Q+M+  G   T       +  +   G P+ +LK       D
Sbjct: 66  AAVRRLAAAGDVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHD 125

Query: 129 KNV-KPN-DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
               +P   R YN L+ A   +N +     V   M   G+QP+  TYN L RA  Q    
Sbjct: 126 LGCARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRV 185

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL------------------ 228
             A +ML EM      P++ T G IVS  C  G +++A   L                  
Sbjct: 186 GAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAPPVAASYNAVILALC 245

Query: 229 --YRMKEL----------EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
             +RM+E+           + PN++ + +++  F    +       L  M   G  P+V 
Sbjct: 246 REFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVA 305

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           TF+ ++    + G +    +++  MV  G  P    +++L +G    G+ + A S+L  M
Sbjct: 306 TFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDM 365

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
            ++G  PN   ++T+I G+  A  +  A+SI+  M   G  PN+  Y  ++  + +    
Sbjct: 366 EQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMF 425

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSW-------RAIGLAREAKR 436
            +AE L+  M  +   P   T   +  S        RA+G+  E +R
Sbjct: 426 NQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRR 472



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 158/351 (45%), Gaps = 36/351 (10%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+ H+A  ++ C++ EG  P+ ++Y  L+  L      K   S+++ +E+ G  P+
Sbjct: 314 LFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPN 373

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +  ++ +I+  S++G++D A+ I+  M  SGCKP    Y  ++  +       ++  L+ 
Sbjct: 374 ARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLID 433

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  + N  PN  T+N L+R+ C+   +  A  V ++M   G  P+  TYN L     + 
Sbjct: 434 KMLVE-NCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFRE 492

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A QM+ EMQN+ +  +  T   +VSG C+     +AM F+ RM            
Sbjct: 493 GNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRM------------ 540

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
             +++G                     ++PD  TF+ I+ A+   G +     I   M  
Sbjct: 541 --IVRG---------------------IQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNV 577

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
                +I V++IL        + + A   L  M   G++PN V +  ++ G
Sbjct: 578 VNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRG 628



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/351 (21%), Positives = 148/351 (42%), Gaps = 23/351 (6%)

Query: 179 AYAQYGETYRAEQMLFEMQNNQ--VRPNE-RTCGIIVSGYCKEGNMEDAMRFLY-RMKEL 234
           A+A+ G   RA +  +   ++    RP   R    ++    +E NM  A+  +   M++ 
Sbjct: 105 AFARAGAPDRALKTFYRAVHDLGCARPTAPRLYNHLIDALLRE-NMVGAVALVCGNMRKD 163

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            V PN+  +N L++            K L  M   G  PD VT+ TI+ A  + G + + 
Sbjct: 164 GVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEA 223

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
            E+      +   P    ++ +     R    Q+  +++  M   G+ PNV+ +TT+++ 
Sbjct: 224 TEVL-----SAAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNA 278

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
           +C A +++ A +I  +M   G  PN+ T+  L+ G     +   A ++ + M  +G  P 
Sbjct: 279 FCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPS 338

Query: 415 KSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKD-EIAVESIHRKQNLSASNSTF 473
             +  ++     ++G  + A  VL   E+     PN +     ++   +  +L  + S +
Sbjct: 339 TVSYNVLIRGLCSVGDLKGASSVLNDMEQ-HGCFPNARTYSTLIDGFSKAGDLDGAISIW 397

Query: 474 LQIPGVVSSEHNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQPMVV 524
                      N  + +  +  +V+ ++ V    K L  N   S +  M+V
Sbjct: 398 -----------NDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLV 437


>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 831

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 208/420 (49%), Gaps = 4/420 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE---KDGMKPDS 64
           G    A  I   + E+G   TL  Y  L+      +     L++  +++   + G+ P  
Sbjct: 311 GNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTV 370

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           + +  +IN  S+ G +D+A++I  +M+D G K    TY+ +I GY  +G    +  + + 
Sbjct: 371 VSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFED 430

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           MS +  +KP+  TYNIL+ A+C    +  A  ++ +M +    P   TY  +   + + G
Sbjct: 431 MS-NAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIG 489

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +   A + + +M+    RP+  T  +I+ G  + G M+ A   +  M    VHPN   + 
Sbjct: 490 DLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYT 549

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +LI+G+  I D     K    ++E G+KPDV+ +++++ A   AG M     I  +M  A
Sbjct: 550 TLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAA 609

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+  + ++++IL  G+ + G+  +A  I+  MR  G+ P++  +T+ I+  C A  M +A
Sbjct: 610 GVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKA 669

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
               E+M + G+ PNL+ Y TL+ G+  A  P +A      M+  G+ P K     +  S
Sbjct: 670 TETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDKPLYHCIMTS 729



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/436 (23%), Positives = 202/436 (46%), Gaps = 4/436 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  H A   F  +   G  P + +YT L+ A    +  +  ++ + ++E +G+ P++  
Sbjct: 205 RGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAAT 264

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +I+     G+V+ A + FQ+            YN +I  Y   G  E +  ++  M 
Sbjct: 265 YSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAM- 323

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVA---SGIQPDAVTYNTLARAYAQY 183
           +++ ++     YN+L+  +    ++++  NV  ++ A   +G+ P  V+Y  L   Y++ 
Sbjct: 324 EEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKL 383

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+  +A Q+  EM++  ++ N +T  +I+ GY + G+  +A      M    + P+ + +
Sbjct: 384 GKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITY 443

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N L+  F      +   + L  ME     P + T++ I+D +   G +    E   DM  
Sbjct: 444 NILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKM 503

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           AG  P    ++++  G  +AG+  +A SI+  M   GVHPN   +TT+I G+     M  
Sbjct: 504 AGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGL 563

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A   + ++ E+G+ P++  Y +LL    +A +      +   M   GV        ++ D
Sbjct: 564 AFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLD 623

Query: 424 SWRAIGLAREAKRVLK 439
            W   G   EA  +++
Sbjct: 624 GWAQRGDMWEASDIMQ 639



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/461 (23%), Positives = 200/461 (43%), Gaps = 74/461 (16%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P    +T LV    ++    S  +    +   G++P+   +  +I+A + + ++  A+ 
Sbjct: 189 KPKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIA 248

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
             ++M+  G  P  +TY+ +I GYG +G  E + +  Q  +  +N   ND  YN ++ A+
Sbjct: 249 CVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQ-RALSENWHHNDVIYNNIIHAY 307

Query: 146 CSKNSIEEA-----------------------------------WNVVYKMVA---SGIQ 167
           C   ++E A                                    NV  ++ A   +G+ 
Sbjct: 308 CKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLS 367

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY------------ 215
           P  V+Y  L   Y++ G+  +A Q+  EM++  ++ N +T  +I+ GY            
Sbjct: 368 PTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSV 427

Query: 216 -----------------------CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
                                  CK G M  A+  L RM+  +  P L  +  +I GF+ 
Sbjct: 428 FEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMK 487

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           I D     + +  M+  G +P   T++ IM   + AG M +   I D+MV AG+ P+   
Sbjct: 488 IGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERS 547

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++ L +GY   G+   A      +++ G+ P+V+ + +++   C A +MQ  ++I  +M 
Sbjct: 548 YTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMA 607

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             G+  N   Y  LL G+ +    W A +++Q M  +G+ P
Sbjct: 608 AAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTP 648



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 89/387 (22%), Positives = 179/387 (46%), Gaps = 36/387 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+    GK  +A  I N + ++G +    TY+ ++    +     +  S+   +   G+
Sbjct: 377 INLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGI 436

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD I +N ++NA  ++G ++ A+++  +M+   C PT  TY  +I G+  +G    + +
Sbjct: 437 KPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFE 496

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            ++ M      +P+  TYN+++        ++ A +++ +MV +G+ P+  +Y TL    
Sbjct: 497 TVRDMKM-AGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTL---- 551

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                                          + GY   G+M  A ++  R+KE+ + P++
Sbjct: 552 -------------------------------IEGYACIGDMGLAFKYFNRIKEVGLKPDV 580

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + + SL+K                 M   GV  +   ++ ++D W+  G M +  +I   
Sbjct: 581 IAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQK 640

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G+ PDIH ++       +AG+  KA   +  M++ GV PN+  +TT+I GW +A  
Sbjct: 641 MRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASY 700

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLL 387
            ++A+  Y++M   G+ P+   Y  ++
Sbjct: 701 PEKALICYDEMKSAGMIPDKPLYHCIM 727



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 160/343 (46%), Gaps = 10/343 (2%)

Query: 107 KGYGNV--GKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS 164
           KG+ N+    P+++ K++    + K  KP  R + +LV  +  +     A      M A+
Sbjct: 164 KGFRNLVEDHPKDARKVVDAFKRIK--KPKQRDHTLLVNYYGKRGDKHSARAAFESMRAA 221

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           GI+P+  +Y  L  AYA   +   A   + EM+   V PN  T  +I+SGY + G++E A
Sbjct: 222 GIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAA 281

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
            R+  R      H N V++N++I  +    + +  +  +T MEE G++  +  ++ +MD 
Sbjct: 282 ERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDG 341

Query: 285 WSSAGLMGKCQEIFDDM---VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +     + KC  +F  +    + G+ P +  +  L   Y + G+  KA  I   M   G+
Sbjct: 342 YVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGI 401

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
             N   ++ +I G+        A S++E M   GI P+  TY  L+  + +  Q  RA E
Sbjct: 402 KHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALE 461

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIG---LAREAKRVLKSA 441
           LL  ME     P   T  ++ D +  IG   +A E  R +K A
Sbjct: 462 LLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMA 504


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 216/421 (51%), Gaps = 8/421 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQ-KRFKSILSLISKVEKDG 59
             +LV  G   EA  +F+ ++  G   ++ +    ++ L+      K  L +  +  + G
Sbjct: 189 FQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVG 248

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +  ++  +N + ++  + G V EA ++  +M+  GC P   +Y+T+I GY  VG+ +  L
Sbjct: 249 VCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVL 308

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           KL++ M Q K +KPN  TYN ++   C    + EA  V+ +M++ GI PD V Y TL   
Sbjct: 309 KLIEEM-QIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDG 367

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + + G    A ++  EMQ  ++ P+  T   ++ G C+ G + +A +  + M    + P+
Sbjct: 368 FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 427

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            V + +LI G+        + +A +L   M + G+ P++VT++ + D     G +    E
Sbjct: 428 EVTYTALIDGYC---KEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 484

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +  +M + G+E +I+ ++ L  G  +AG   +A  ++  M   G HP+ V +TT++  +C
Sbjct: 485 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYC 544

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
            + +M RA  +  +M +  + P + T+  L+ G+  +      E+LL+ M EKG+ P  +
Sbjct: 545 KSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNAT 604

Query: 417 T 417
           T
Sbjct: 605 T 605



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 197/403 (48%), Gaps = 1/403 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EAH +   +   G  P +I+Y+T++    +    + +L LI +++  G+KP+   +
Sbjct: 267 GRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTY 326

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I    ++G V EA ++ ++M   G  P    Y TLI G+  +G    + +L   M Q
Sbjct: 327 NGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM-Q 385

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + + P+  TY  ++   C    + EA  + ++MV   ++PD VTY  L   Y + G+  
Sbjct: 386 KRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMK 445

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +  +M    + PN  T   +  G CK G ++ A   L+ M    +  N+  +NSL+
Sbjct: 446 EAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLV 505

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G     + D   K +  ME  G  PD VT++T+MDA+  +  M +  E+   M+   ++
Sbjct: 506 NGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQ 565

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P +  F++L  G+  +G  +  E +L  M + G+ PN   + ++I  +C    M+    I
Sbjct: 566 PTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEI 625

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           Y  MC  G+ P+  TY  L+ G+ +A+    A  L + M  KG
Sbjct: 626 YRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 668



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 202/408 (49%), Gaps = 5/408 (1%)

Query: 20  LIEE----GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           LIEE    G +P   TY  ++  L +  +      ++ ++  +G+ PD +++  +I+   
Sbjct: 310 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 369

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + GNV  A ++F +M+     P   TY  +I G    G+  E+ KL   M   K ++P++
Sbjct: 370 KLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVC-KRLEPDE 428

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY  L+  +C +  ++EA+++  +M+  G+ P+ VTY  LA    + GE   A ++L E
Sbjct: 429 VTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHE 488

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M    +  N  T   +V+G CK GN++ A++ +  M+    HP+ V + +L+  +   ++
Sbjct: 489 MCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSRE 548

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
                + L  M +  ++P VVTF+ +M+ +  +G++   +++   M++ GI P+   ++ 
Sbjct: 549 MVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNS 608

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L K Y      +    I   M   GV P+   +  +I G C A  M+ A  ++  M   G
Sbjct: 609 LIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 668

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
            N  + +Y  L+ G+ + K+   A EL + M  +G+   +    + AD
Sbjct: 669 FNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 716



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 185/366 (50%), Gaps = 6/366 (1%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL- 121
           D  +F+       E+G +DEA K+F KM + G   +  + N  I    ++ +  + +K+ 
Sbjct: 181 DPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFI---SHLSEDLDGIKIA 237

Query: 122 LQLMSQ--DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           L++  +  +  V  N  +YNI+  + C    + EA  ++ +M   G  PD ++Y+T+   
Sbjct: 238 LKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVING 297

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           Y Q GE  R  +++ EMQ   ++PN  T   ++   CK G + +A R L  M    + P+
Sbjct: 298 YCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPD 357

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            V++ +LI GF  + +     +    M++  + PD +T++ ++      G + +  ++F 
Sbjct: 358 GVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFH 417

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +MV   +EPD   ++ L  GY + G+ ++A S+   M + G+ PN+V +T +  G C   
Sbjct: 418 EMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCG 477

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           ++  A  +  +MC  G+  N+ TY +L+ G  +A    +A +L++ ME  G  P   T  
Sbjct: 478 EVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYT 537

Query: 420 LVADSW 425
            + D++
Sbjct: 538 TLMDAY 543



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 197/384 (51%), Gaps = 3/384 (0%)

Query: 68  NAMINACSES-GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           N  I+  SE    +  A+K+F +  + G    T++YN +      +G+  E+ +LL L  
Sbjct: 221 NLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLL-LQM 279

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + +   P+  +Y+ ++  +C    ++    ++ +M   G++P+  TYN +     + G+ 
Sbjct: 280 ELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKV 339

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             AE++L EM +  + P+      ++ G+CK GN+  A R    M++ ++ P+ + + ++
Sbjct: 340 AEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAV 399

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G          DK    M    ++PD VT++ ++D +   G M +   + + M++ G+
Sbjct: 400 ICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGL 459

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+I  ++ LA G  + GE   A  +L  M + G+  N+  + ++++G C A  + +A+ 
Sbjct: 460 TPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVK 519

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           + + M   G +P+  TY TL+  Y ++++  RA ELL+ M ++ ++P   T  ++ + + 
Sbjct: 520 LMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFC 579

Query: 427 AIGLAREAKRVLKSAEEDRQSMPN 450
             G+  + +++LK   E +  MPN
Sbjct: 580 MSGMLEDGEKLLKWMLE-KGIMPN 602



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 180/381 (47%), Gaps = 1/381 (0%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           +L   GK  EA  +   +I EG  P  + YTTL+    +     S   L  +++K  + P
Sbjct: 332 LLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISP 391

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D I + A+I    ++G V EA K+F +M     +P   TY  LI GY   GK +E+  L 
Sbjct: 392 DFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLH 451

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             M Q   + PN  TY  L    C    ++ A  ++++M   G++ +  TYN+L     +
Sbjct: 452 NQMLQ-MGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCK 510

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G   +A +++ +M+     P+  T   ++  YCK   M  A   L +M + E+ P +V 
Sbjct: 511 AGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVT 570

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           FN L+ GF      +  +K L  M E G+ P+  T+++++  +     M    EI+  M 
Sbjct: 571 FNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMC 630

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G+ PD + ++IL KG+ +A   ++A  +   M   G +  V  +  +I G+    K  
Sbjct: 631 AKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFL 690

Query: 363 RAMSIYEKMCEIGINPNLKTY 383
            A  ++E+M   G+  + + Y
Sbjct: 691 EARELFEQMRREGLVADREIY 711



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 153/308 (49%), Gaps = 7/308 (2%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  EA  + N +++ G  P ++TYT L   L +     +   L+ ++ + G++ +   
Sbjct: 441 EGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYT 500

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N+++N   ++GN+D+A+K+ + M+ +G  P   TY TL+  Y    K  E ++  +L+ 
Sbjct: 501 YNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYC---KSREMVRAHELLR 557

Query: 127 Q--DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           Q  D+ ++P   T+N+L+  +C    +E+   ++  M+  GI P+A TYN+L + Y    
Sbjct: 558 QMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRN 617

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR-MKELEVHPNLVVF 243
                 ++   M    V P+  T  I++ G+CK  NM++A  FL+R M     +  +  +
Sbjct: 618 NMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW-FLHRDMVGKGFNLTVSSY 676

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+LIKGF   K      +    M   G+  D   ++   D     G M    E+ D+ ++
Sbjct: 677 NALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIE 736

Query: 304 AGIEPDIH 311
             +  DI 
Sbjct: 737 KCLVGDIQ 744


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 127/491 (25%), Positives = 229/491 (46%), Gaps = 43/491 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G    +  +F  + E G  P ++TY +L+    +    + + SL ++++  G 
Sbjct: 296 IDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGC 355

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I +N +IN   +   +  A + F +MK++G KP   TY+TLI  +   G  + ++K
Sbjct: 356 VPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIK 415

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M +   + PN+ TY  L+ A C   ++ EAW ++  M+ +G++ + VTY  L    
Sbjct: 416 LFVDMRR-TGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGL 474

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    AE++   M  + + PN++    +V GY K   MEDAM+ L +M E  + P+L
Sbjct: 475 CKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDL 534

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +++ S+I G    +  +     L  M+  G+  + V  +TI+DA+  AG        F +
Sbjct: 535 ILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQE 594

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC--NA 358
           M   G+E  I  + +L  G  +AG  + A      M   G+ PNV ++T++I G C  N 
Sbjct: 595 MQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNC 654

Query: 359 VK---------------------------------MQRAMSIYEKMCEIGINPNLKTYET 385
           ++                                 +Q A+ +  +M E+ I  +L  Y +
Sbjct: 655 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTS 714

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKS-TIQLVADSWR------AIGLAREAKRVL 438
           L+ G+ +  +  +A +    M EKG+ P++   I L+ + ++      AI L  E +R+ 
Sbjct: 715 LVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMG 774

Query: 439 KSAEEDRQSMP 449
              E      P
Sbjct: 775 LITESATMQFP 785



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 209/428 (48%), Gaps = 1/428 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
            FN +I  G  P++ TY  ++  L ++   ++   L  ++ + G+ PD + +N++I+   
Sbjct: 276 FFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYG 335

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G+++E   +F +MKD GC P   TYN LI  Y    K   + +    M ++  +KPN 
Sbjct: 336 KVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEM-KNNGLKPNV 394

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY+ L+ A+C +  ++ A  +   M  +G+ P+  TY +L  A  + G    A ++L +
Sbjct: 395 VTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 454

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M    V+ N  T   ++ G CK G M +A      M +  + PN  V+ +L+ G++  + 
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 514

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            +   K L  M E  +KPD++ + +I+    S   + + + I ++M   GI  +  + + 
Sbjct: 515 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 574

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           +   Y +AG+   A +    M+  GV   +V +  +I G C A  ++ A+  + +M  +G
Sbjct: 575 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLG 634

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           + PN+  Y +L+ G  +      A++L   M+ +G+ P  +    + D     G  +EA 
Sbjct: 635 LQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEAL 694

Query: 436 RVLKSAEE 443
            ++    E
Sbjct: 695 VLISRMTE 702



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 187/378 (49%), Gaps = 1/378 (0%)

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
           +F+ + +   E G ++EA + F +M++    P   + N L+      G  +   K    M
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 280

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
                + P+  TYN+++   C +  +E +  +  +M   G+ PD VTYN+L   Y + G 
Sbjct: 281 I-GAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGS 339

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
                 +  EM++    P+  T   +++ YCK   M  A  +   MK   + PN+V +++
Sbjct: 340 LEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYST 399

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           LI  F       G  K    M   G+ P+  T+++++DA   AG + +  ++ +DM++AG
Sbjct: 400 LIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 459

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           ++ +I  ++ L  G  +AG   +AE +  SM K G+ PN  ++T ++ G+  A +M+ AM
Sbjct: 460 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAM 519

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            I ++M E  I P+L  Y +++WG+   ++    + +L+ M+ +G+         + D++
Sbjct: 520 KILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAY 579

Query: 426 RAIGLAREAKRVLKSAEE 443
              G + +A    +  ++
Sbjct: 580 FKAGKSSDALNFFQEMQD 597



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 132/281 (46%), Gaps = 1/281 (0%)

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
            ++ L   + + G    A +    M+N +  P  R+C  ++    K GN +   +F   M
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 280

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
               + P++  +N +I       D +   +    M E G+ PDVVT+++++D +   G +
Sbjct: 281 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 340

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            +   +F++M   G  PDI  ++ L   Y +  +  +A    + M+  G+ PNVV ++T+
Sbjct: 341 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 400

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I  +C    MQ A+ ++  M   G+ PN  TY +L+    +A     A +LL  M + GV
Sbjct: 401 IDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 460

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK 452
           +    T   + D     G   EA+ V +S  +D  S PN++
Sbjct: 461 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGIS-PNQQ 500


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 233/482 (48%), Gaps = 47/482 (9%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTR-------------------------- 41
           GKPH A  +F  +I    +P L+T  TL+  L R                          
Sbjct: 145 GKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDV 204

Query: 42  ------------QKRFKSILSLISK-VEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
                       + + +  L ++ + V +  + PD++ +N ++ A S+ G + +   +  
Sbjct: 205 KTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLL 264

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
            MK +G  P   TYN L+ GY  +G  +E+ ++++LM Q  N+ P+  TYNIL+   C+ 
Sbjct: 265 DMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ-TNILPDLCTYNILINGVCNA 323

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
            SI E   ++  M +  +QPD VTYNTL     + G +  A++++ +M+N+ V+PN+ T 
Sbjct: 324 GSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTH 383

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKEL-EVH---PNLVVFNSLIKGFLDIKDSDGVDKALT 264
            I +   CKE   E+  R   ++KEL E+H   P++V +++LIK +L + D  G  + + 
Sbjct: 384 NISLKWLCKEEKREEVTR---KVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMR 440

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M + G+K + +T +TI+DA      + +   + D   K G   D   +  L  GY R  
Sbjct: 441 EMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREE 500

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           + +KA  +   M++  + P V  F ++I G C+  K + AM  ++++ E G+ P+  T+ 
Sbjct: 501 KVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFN 560

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           +++ GY +  +  +A E      +   +P   T  ++ +     G+  +A     +   +
Sbjct: 561 SIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITE 620

Query: 445 RQ 446
           R+
Sbjct: 621 RE 622



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 198/420 (47%), Gaps = 9/420 (2%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P  +TY  LV    +    K    ++  +++  + PD   +N +IN    +G++ E 
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREG 329

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +++   MK    +P   TYNTLI G   +G   E+ KL++ M  D  VKPN  T+NI ++
Sbjct: 330 LELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMEND-GVKPNQVTHNISLK 388

Query: 144 AWCSKNSIEEAWNVVYKMVA-SGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
             C +   EE    V ++V   G  PD VTY+TL +AY + G+   A +M+ EM    ++
Sbjct: 389 WLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIK 448

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
            N  T   I+   CKE  +++A   L    +     + V + +LI G+      + V+KA
Sbjct: 449 MNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYF---REEKVEKA 505

Query: 263 LTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
             +   M+   + P V TF++++      G      E FD++ ++G+ PD   F+ +  G
Sbjct: 506 FEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILG 565

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y + G  +KA        K+   P+      +++G C     ++A++ +  +       +
Sbjct: 566 YCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI-TEREVD 624

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             TY T++  + + K+   A +LL  MEEK + P + T   +  S    G   EA  +LK
Sbjct: 625 TVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLK 684



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/396 (24%), Positives = 180/396 (45%), Gaps = 39/396 (9%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTST-------------------- 101
           P   LF+  ++A   +G    A+++FQKM     KP   T                    
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188

Query: 102 ------------------YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
                             +N L+ GY   GK E++L +L+ M  + NV P++ TYN +++
Sbjct: 189 REVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILK 248

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           A   K  + +  +++  M  +G+ P+ VTYN L   Y + G    A Q++  M+   + P
Sbjct: 249 AMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILP 308

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T  I+++G C  G++ + +  +  MK L++ P++V +N+LI G  ++  S    K +
Sbjct: 309 DLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLM 368

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA-GIEPDIHVFSILAKGYVR 322
             ME  GVKP+ VT +  +          +      ++V+  G  PDI  +  L K Y++
Sbjct: 369 EQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLK 428

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G+   A  ++  M + G+  N +   T++   C   K+  A ++ +   + G   +  T
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVT 488

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
           Y TL+ GY   ++  +A E+   M+   + P  +T 
Sbjct: 489 YGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTF 524



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 115/231 (49%), Gaps = 2/231 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  + K  EAH + +   + G+    +TY TL+    R+++ +    +  ++++  +
Sbjct: 458 LDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKI 517

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P    FN++I      G  + AM+ F ++ +SG  P   T+N++I GY   G+ E++ +
Sbjct: 518 TPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFE 577

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
                S   + KP++ T NIL+   C +   E+A N    ++    + D VTYNT+  A+
Sbjct: 578 FYN-ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITER-EVDTVTYNTMISAF 635

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
            +  +   A  +L EM+  ++ P+  T   I++   ++G + +A   L + 
Sbjct: 636 CKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKF 686



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/157 (21%), Positives = 69/157 (43%), Gaps = 4/157 (2%)

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
           +S   +  C  +    +     P   +F I    Y+ AG+P  A  +   M +  + PN+
Sbjct: 107 TSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNL 166

Query: 346 VMFTTVISG---WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           +   T++ G   + ++  +  A  +++ M +IG++ ++KT+  L+ GY    +   A  +
Sbjct: 167 LTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGM 226

Query: 403 LQVM-EEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           L+ M  E  V P   T   +  +    G   + K +L
Sbjct: 227 LERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLL 263



 Score = 39.3 bits (90), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 9/131 (6%)

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVH----PNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
           L   Y+R  +   + S+  S+    +H    P+  +F   +S + +A K   A+ +++KM
Sbjct: 100 LLVSYIRTSDA--SLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHAGKPHVALQVFQKM 157

Query: 372 CEIGINPNLKTYETLLWG---YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
             + + PNL T  TLL G   Y  +     A E+   M + GV     T  ++ + +   
Sbjct: 158 IRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLE 217

Query: 429 GLAREAKRVLK 439
           G   +A  +L+
Sbjct: 218 GKLEDALGMLE 228


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 215/402 (53%), Gaps = 1/402 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L+ +G+  +A+ +F+ +++ G  P ++TY+++++AL++ +       + +++ K+G+
Sbjct: 215 INGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGV 274

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I++ ++++    SG   EA+ IF+KM   G +P   TY  L+      GK  E+ K
Sbjct: 275 MPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARK 334

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   + + +  KP+  TY  L+  + ++ ++ E  +++  M+  G+Q     +N +  AY
Sbjct: 335 IFDSLVK-RGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAY 393

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A++ +   A  +   M+   + P+    G ++   C  G ++DA+     +K   + PN+
Sbjct: 394 AKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNI 453

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           VVF +LI G       D V++    M + G+  D + F+ IM      G + + + +FD 
Sbjct: 454 VVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDL 513

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ GIEP+ + ++ L  GY   G+  +A  +L  M   GV P+ V + T+I+G+    +
Sbjct: 514 MVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGR 573

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           ++  +++  +M   G+NP + TYE LL G  +A +   A+EL
Sbjct: 574 IEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKEL 615



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 202/413 (48%), Gaps = 9/413 (2%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
           ++ YTT++  L R+ +     SL   +   G  PD + ++++I+A S++  +D+A ++F 
Sbjct: 208 VVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFT 267

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
           +M  +G  P    Y +L+ GY + GKP+E++ + + M +   V+P+  TY  L+   C  
Sbjct: 268 RMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCR-HGVEPDVVTYTALMDYLCKN 326

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
               EA  +   +V  G +PD+ TY TL   YA  G       +L  M    ++      
Sbjct: 327 GKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIF 386

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG-VDKALTLME 267
            +I+  Y K   +++A+     M++  ++P++V + ++    LDI  + G VD AL+   
Sbjct: 387 NMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTV----LDILCTAGRVDDALSQFN 442

Query: 268 EF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
                G+ P++V F+T++    +     K +E+  +M+  GI  D   F+ +     + G
Sbjct: 443 SLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKG 502

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              +A+++   M + G+ PN   + T+I G+C   KM  AM +   M   G+ P+  TY 
Sbjct: 503 RVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYN 562

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           T++ GY +  +      LL+ M+ KGV P   T +++       G    AK +
Sbjct: 563 TIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKEL 615



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 200/440 (45%), Gaps = 9/440 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLIS-KVEKDGMKP-DSI 65
           G+      +   + E G +P L +YT L+  L   K  +  L L+    +  G  P D +
Sbjct: 150 GRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVV 209

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            +  +IN     G +D+A  +F  M D G  P   TY+++I         +++ ++   M
Sbjct: 210 AYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRM 269

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
            ++  V P+   Y  LV  +CS    +EA  +  KM   G++PD VTY  L     + G+
Sbjct: 270 VKN-GVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGK 328

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
           +  A ++   +     +P+  T G ++ GY  EG + +    L  M +  +     +FN 
Sbjct: 329 STEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNM 388

Query: 246 LIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           ++  +      + VD+AL +   M + G+ PD+V + T++D   +AG +      F+ + 
Sbjct: 389 IMGAY---AKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLK 445

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G+ P+I VF+ L  G     +  K E +   M   G+  + + F  ++   C   ++ 
Sbjct: 446 SEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVI 505

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A ++++ M  IGI PN  TY TL+ GY    +   A +LL VM   GV+P   T   + 
Sbjct: 506 EAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTII 565

Query: 423 DSWRAIGLAREAKRVLKSAE 442
           + +   G   +   +L+  +
Sbjct: 566 NGYSQNGRIEDGLTLLREMD 585



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/413 (23%), Positives = 200/413 (48%), Gaps = 6/413 (1%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHR---PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK 61
           V +  P  A  +FN +   G     P + TY  ++    R  R     + + +V   G++
Sbjct: 72  VARASPAVAISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLR 131

Query: 62  --PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
             P+ +  ++    C+  G       + ++M + GCKP   +Y  L+KG  +    +++L
Sbjct: 132 HEPNPLQSSSQGPLCTAGGRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQAL 191

Query: 120 KLLQLMSQDKNVKPND-RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
            LL +M+  K   P D   Y  ++     +  +++A+++   M+  G  PD VTY+++  
Sbjct: 192 DLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIIS 251

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           A ++     +A Q+   M  N V P+      +V GYC  G  ++A+    +M    V P
Sbjct: 252 ALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEP 311

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           ++V + +L+        S    K    + + G KPD  T+ T++  +++ G + +  ++ 
Sbjct: 312 DVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLL 371

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           D M+K G++   H+F+++   Y +  +  +A  + ++MR+ G++P++V + TV+   C A
Sbjct: 372 DLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTA 431

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
            ++  A+S +  +   G+ PN+  + TL+ G     +  + EEL   M ++G+
Sbjct: 432 GRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGI 484



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 160/363 (44%), Gaps = 36/363 (9%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F  +++ G  P  I YT+LV       + K  + +  K+ + G++PD + + A++
Sbjct: 261 KATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALM 320

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   ++G   EA KIF  +   G KP ++TY TL+ GY   G   E   LL LM + K +
Sbjct: 321 DYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMK-KGM 379

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA-- 189
           +     +N+++ A+   N ++EA  V   M   G+ PD V Y T+       G    A  
Sbjct: 380 QLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALS 439

Query: 190 ---------------------------------EQMLFEMQNNQVRPNERTCGIIVSGYC 216
                                            E++ FEM +  +  +      I+   C
Sbjct: 440 QFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLC 499

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           K+G + +A      M  + + PN   +N+LI G+      D   K L +M   GVKP  V
Sbjct: 500 KKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDV 559

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T++TI++ +S  G +     +  +M   G+ P I  + +L +G  +AG    A+ +   M
Sbjct: 560 TYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 619

Query: 337 RKY 339
            K+
Sbjct: 620 IKW 622


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 226/444 (50%), Gaps = 18/444 (4%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  IF  ++E G  P + TY  L+         +  L    ++E++G  P+ + +N +I+
Sbjct: 187 AEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIID 246

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
           A  +   + EA K+ + M   G  P   +YN +I G    G+ +E+ ++L+ MS+ + V 
Sbjct: 247 AYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV- 305

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+  T+N L+  +C+  +  +A  +  +MV +G+ P+ VTY TL  +  + G   RA + 
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEF 365

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           L +M++  + PN RT   ++ G+ ++G ++ A + +  M E    P ++ +N+LI G   
Sbjct: 366 LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCI 425

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +   +     L  M E G  PDVV++STI+  +     + K  ++  +MV  GI PD+  
Sbjct: 426 LGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVAT 485

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           +S L +G  +     +   +   M   G+ P+ V +T++I+ +C    + +A+ ++++M 
Sbjct: 486 YSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMI 545

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEE-LLQVMEEKGVRPKKSTIQLVADSWRAI--- 428
           + G +P++ TY  L+ G+ +  +   A+  LL+++ E+ V P + T   + D+   +   
Sbjct: 546 QKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESV-PNEITYNTLIDNCNNLEFK 604

Query: 429 ------------GLAREAKRVLKS 440
                       GL  EA RVL+S
Sbjct: 605 SALALMKGFCMKGLMNEADRVLES 628



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 213/425 (50%), Gaps = 4/425 (0%)

Query: 16  IFNCLIEEGH--RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA 73
           +F CL    +  + +   +  +V +  R       LS+++  +  G  P  + +NA+++A
Sbjct: 117 LFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDA 176

Query: 74  CSESG-NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              +  +V  A  IF++M +SG  P   TYN LI+G+   G  E  L     M ++  + 
Sbjct: 177 VIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCL- 235

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           PN  TYN ++ A+C    I EA+ ++  M   G+ P+ ++YN +     + G+     ++
Sbjct: 236 PNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEI 295

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           L EM   +  P+  T   +++GYC  GN   A+     M +  + PN+V + +LI     
Sbjct: 296 LEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCK 355

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
             + +   + L  M + G+ P+  T++T++D +S  G + +  +I  +MV+ G  P I  
Sbjct: 356 AGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIIT 415

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++ L  G+   G  + A  +L  M + G  P+VV ++T+ISG+C   ++++A  +  +M 
Sbjct: 416 YNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMV 475

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
             GI+P++ TY +L+ G  + ++     +L Q M   G+ P + T   + +++   G   
Sbjct: 476 AKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLD 535

Query: 433 EAKRV 437
           +A R+
Sbjct: 536 KALRL 540



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 204/445 (45%), Gaps = 16/445 (3%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  +   +  +G  P LI+Y  ++  L R+ + K    ++ ++ K    PD + FN
Sbjct: 253 KIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFN 312

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +IN     GN  +A+ +  +M  +G  P   TY TLI      G    +++ L  M +D
Sbjct: 313 TLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM-RD 371

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           + + PN RTY  L+  +  +  +++A+ ++ +MV +G  P  +TYN L   +   G    
Sbjct: 372 RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMED 431

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  +L EM      P+  +   I+SG+C+   +E A +    M    + P++  ++SLI+
Sbjct: 432 ASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQ 491

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G    +    V      M   G+ PD VT++++++A+   G + K   + D+M++ G  P
Sbjct: 492 GLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSP 551

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS--------------- 353
           DI  +++L  G+ +    ++A+ +L  +      PN + + T+I                
Sbjct: 552 DIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMK 611

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G+C    M  A  + E M + G   N + Y  ++ G+ +     +A  L + M   G  P
Sbjct: 612 GFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAP 671

Query: 414 KKSTIQLVADSWRAIGLAREAKRVL 438
              TI  +A S    G   E  ++L
Sbjct: 672 HSVTIMALAKSLYHEGKEVELNQLL 696



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 181/355 (50%), Gaps = 18/355 (5%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G  H+A  +   +++ G  P ++TYTTL+ ++ +       +  + ++   G+ P+   +
Sbjct: 322 GNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTY 381

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+  S+ G + +A +I ++M ++G  PT  TYN LI G+  +G+ E++  LLQ M +
Sbjct: 382 TTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIE 441

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            +   P+  +Y+ ++  +C    +E+A+ +  +MVA GI PD  TY++L +   +     
Sbjct: 442 -RGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLG 500

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
               +  EM +  + P+E T   +++ YC EG+++ A+R    M +    P++V +N LI
Sbjct: 501 EVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLI 560

Query: 248 KGF-LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD---------------AWSSAGLM 291
            GF    +  +     L L+ E  V P+ +T++T++D                +   GLM
Sbjct: 561 NGFNKQSRTKEAKRLLLKLLYEESV-PNEITYNTLIDNCNNLEFKSALALMKGFCMKGLM 619

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
            +   + + M++ G + +  V++++  G+ + G  +KA ++   M   G  P+ V
Sbjct: 620 NEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSV 674



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/414 (24%), Positives = 196/414 (47%), Gaps = 23/414 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  E   I   + +  + P  +T+ TL+        F   L L +++ K+G+
Sbjct: 280 INGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGL 339

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +  +IN+  ++GN++ AM+   +M+D G  P   TY TLI G+   G  +++ +
Sbjct: 340 SPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQ 399

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +++ M ++    P   TYN L+   C    +E+A  ++ +M+  G  PD V+Y+T+   +
Sbjct: 400 IMKEMVEN-GFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGF 458

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  E  +A Q+  EM    + P+  T   ++ G CK+  + +       M  L + P+ 
Sbjct: 459 CRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDE 518

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V + SLI  +    D   +DKAL L +E    G  PD+VT++ +++ ++      + + +
Sbjct: 519 VTYTSLINAYCIEGD---LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRL 575

Query: 298 FDDMVKAGIEPDIHVFSI---------------LAKGYVRAGEPQKAESILTSMRKYGVH 342
              ++     P+   ++                L KG+   G   +A+ +L SM + G  
Sbjct: 576 LLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYK 635

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG-YGEAKQ 395
            N  ++  +I G      +++A ++Y++M   G  P+  T   L    Y E K+
Sbjct: 636 LNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKE 689



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 164/320 (51%), Gaps = 2/320 (0%)

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR-AE 190
           K +   ++++V++    N I +A ++V    + G  P  ++YN +  A  +  ++ + AE
Sbjct: 129 KSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAE 188

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            +  EM  + V PN  T  I++ G+C  GN+E  + F   M+     PN+V +N++I  +
Sbjct: 189 GIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAY 248

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
             ++      K L LM   G+ P++++++ +++     G M +  EI ++M K    PD 
Sbjct: 249 CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             F+ L  GY   G   +A  +   M K G+ PNVV +TT+I+  C A  + RAM   ++
Sbjct: 309 VTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQ 368

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M + G++PN +TY TL+ G+ +     +A ++++ M E G  P   T   + +    +G 
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428

Query: 431 AREAKRVLKSAEEDRQSMPN 450
             +A  +L+   E R  +P+
Sbjct: 429 MEDASGLLQEMIE-RGFIPD 447



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 159/355 (44%), Gaps = 22/355 (6%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   +A+ I   ++E G  PT+ITY  L+       R +    L+ ++ + G  PD + 
Sbjct: 391 QGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVS 450

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +I+    +  +++A ++  +M   G  P  +TY++LI+G     +  E   L Q M 
Sbjct: 451 YSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEM- 509

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
               + P++ TY  L+ A+C +  +++A  +  +M+  G  PD VTYN L   + +   T
Sbjct: 510 LSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRT 569

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVS---------------GYCKEGNMEDAMRFLYRM 231
             A+++L ++   +  PNE T   ++                G+C +G M +A R L  M
Sbjct: 570 KEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESM 629

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSA 288
            +     N  V+N +I G   + +   ++KA  L +E    G  P  VT   +  +    
Sbjct: 630 LQKGYKLNEEVYNVIIHGHSKVGN---IEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHE 686

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
           G   +  ++ D  +K+    +  +  +L     + G      ++L  M   G+ P
Sbjct: 687 GKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 211/454 (46%), Gaps = 35/454 (7%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK-- 61
           L   G  H+A  +F+ ++     P L  +  ++ AL ++        L+ KV + GM   
Sbjct: 162 LYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSIN 221

Query: 62  --------------------------------PDSILFNAMINACSESGNVDEAMKIFQK 89
                                           PD + +N +I    +     EAM   ++
Sbjct: 222 LFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRR 281

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M + GC P   TYNT+I GY  +   +E+ +LL+  +  K   P+  TY  L+   C++ 
Sbjct: 282 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLK-DAVFKGFVPDQVTYCSLINGLCAEG 340

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            +E A  +  +  A GI+PD V YN+L +     G    A Q++ EM      P+ +T  
Sbjct: 341 DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 400

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
           I+++G CK GN+ DA   +         P++  FN+LI G+      D   + +  M E+
Sbjct: 401 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 460

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G+ PD +T++++++    AG + +  E F +M+  G  P+   ++IL + + R+ + ++A
Sbjct: 461 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 520

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             ++  M + G+HP+ V F T+I G+C    ++ A  +++K+ E G +    T+ TL+  
Sbjct: 521 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGA 580

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           +        AE++   M  KG R    T +++ D
Sbjct: 581 FSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLID 614



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 182/371 (49%), Gaps = 5/371 (1%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +    + +G  P  +TY +L+  L  +   +  L L ++ +  G+KPD +++N+++
Sbjct: 309 EATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLV 368

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ--LMSQDK 129
                 G +  A+++  +M + GC P   TYN +I G   +G   ++  ++   +M   K
Sbjct: 369 KGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIM---K 425

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
              P+  T+N L+  +C +  ++ A  +V +M   GI PD +TYN++     + G+    
Sbjct: 426 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEV 485

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
            +   EM      PN  T  I++  +C+   ME+A + + +M +  +HP+ V FN+LI G
Sbjct: 486 NETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG 545

Query: 250 FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
           F    D +G       +EE G      TF+T++ A+S    M   ++IFD+M+  G   D
Sbjct: 546 FCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 605

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
            + + +L  G  +     +A   L  M K G  P++  F  VI+      ++ +A+ I  
Sbjct: 606 SYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIH 665

Query: 370 KMCEIGINPNL 380
            M +IG+ P +
Sbjct: 666 IMVKIGVVPEV 676



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 208/447 (46%), Gaps = 13/447 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ LV      +AH ++  ++  G  P L T+T  + +     R    L L+  +   G 
Sbjct: 93  MDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG- 151

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
              ++ +  ++      G+  +A ++F +M  +   P  + +N ++      G   E+  
Sbjct: 152 ---AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGL 208

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  + Q + +  N  TYNI +R  C    + EA  +V  M A  + PD VTYNTL R  
Sbjct: 209 LLGKVIQ-RGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGL 266

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A   L  M N    P++ T   I+ GYCK   +++A   L         P+ 
Sbjct: 267 CKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQ 326

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V + SLI G     D   V++AL L  E    G+KPD+V +++++      GL+    ++
Sbjct: 327 VTYCSLINGLCAEGD---VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQV 383

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            ++M + G  PDI  ++I+  G  + G    A  ++      G  P+V  F T+I G+C 
Sbjct: 384 MNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCK 443

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            +K+  A+ + E+M E GI P+  TY ++L G  +A +     E  Q M  KG  P   T
Sbjct: 444 RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPIT 503

Query: 418 IQLVADSW-RAIGLAREAKRVLKSAEE 443
             ++ +++ R+  +   +K ++K ++E
Sbjct: 504 YNILIENFCRSNKMEEASKVIVKMSQE 530



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/506 (23%), Positives = 223/506 (44%), Gaps = 26/506 (5%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            +PH A  +   L   G     + Y T+V  L           L  ++    + P+   F
Sbjct: 135 ARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAF 190

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +++A  + G+V EA  +  K+   G      TYN  I+G    G+  E+++L+  M  
Sbjct: 191 NKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMR- 249

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                P+  TYN L+R  C K+  +EA + + +M+  G  PD  TYNT+   Y +     
Sbjct: 250 -AYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQ 308

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++L +       P++ T   +++G C EG++E A+      +   + P++VV+NSL+
Sbjct: 309 EATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLV 368

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           KG           + +  M E G  PD+ T++ +++     G +     + +D +  G  
Sbjct: 369 KGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYL 428

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+  F+ L  GY +  +   A  ++  M +YG+ P+ + + +V++G C A K+      
Sbjct: 429 PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNET 488

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           +++M   G +PN  TY  L+  +  + +   A +++  M ++G+ P   +   +   +  
Sbjct: 489 FQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCR 548

Query: 428 IGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSEHNGS 487
            G    A  + +  EE                    +  SA+  TF  + G  S + N  
Sbjct: 549 NGDLEGAYLLFQKLEE--------------------KGYSATADTFNTLIGAFSGKLNMH 588

Query: 488 SAAKIRSQIVLRSDTVWTATKSLFVN 513
            A KI  +++ +     + T  + ++
Sbjct: 589 MAEKIFDEMLSKGHRADSYTYRVLID 614



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 124/518 (23%), Positives = 221/518 (42%), Gaps = 57/518 (11%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G   EA  +   +I+ G    L TY   +  L    R    + L+     DGM
Sbjct: 194 LHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLV-----DGM 248

Query: 61  K----PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           +    PD + +N +I    +     EAM   ++M + GC P   TYNT+I GY  +   +
Sbjct: 249 RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQ 308

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           E+ +LL+  +  K   P+  TY  L+   C++  +E A  +  +  A GI+PD V YN+L
Sbjct: 309 EATELLK-DAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSL 367

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV------------------------ 212
            +     G    A Q++ EM      P+ +T  I++                        
Sbjct: 368 VKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY 427

Query: 213 -----------SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
                       GYCK   ++ A++ + RM E  + P+ + +NS++ G       + V++
Sbjct: 428 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNE 487

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
               M   G  P+ +T++ +++ +  +  M +  ++   M + G+ PD   F+ L  G+ 
Sbjct: 488 TFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 547

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           R G+ + A  +   + + G       F T+I  +   + M  A  I+++M   G   +  
Sbjct: 548 RNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSY 607

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS-------WRAIGLAREA 434
           TY  L+ G  +     RA   L  M +KG  P  ST   V +S       ++A+G+    
Sbjct: 608 TYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIM 667

Query: 435 KRVLKSAEEDRQSMPNKKDEIA-----VESIHRKQNLS 467
            ++    E     +   K EIA     VE + +K ++S
Sbjct: 668 VKIGVVPEVVDTILNADKKEIAAPKILVEDLMKKGHIS 705



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/387 (22%), Positives = 155/387 (40%), Gaps = 43/387 (11%)

Query: 60  MKPDSI--LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
           + P +I  L+ A I A + +G + +A+  F++M    C P    YN ++    +    ++
Sbjct: 45  LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 104

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           + K+   M     V P+  T+ I +R++C       A  ++  +   G    AV Y T+ 
Sbjct: 105 AHKVYVRMLA-AGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVV 159

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
                +G T+ A Q+  +M +  V PN      ++   CK G++ +A   L ++ +  + 
Sbjct: 160 CGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMS 219

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
            NL  +N  I+G                  E G  P+ V     M A++           
Sbjct: 220 INLFTYNIWIRGLC----------------EAGRLPEAVRLVDGMRAYAV---------- 253

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
                     PD+  ++ L +G  +   PQ+A   L  M   G  P+   + T+I G+C 
Sbjct: 254 ----------PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCK 303

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              +Q A  + +     G  P+  TY +L+ G        RA EL    + KG++P    
Sbjct: 304 ISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVV 363

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEED 444
              +       GL   A +V+    E+
Sbjct: 364 YNSLVKGLCLQGLILHALQVMNEMAEE 390


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 232/467 (49%), Gaps = 1/467 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  +A+++F+ ++ +G  P ++TY +L+  L + +     ++++  +   G+ PD+  
Sbjct: 213 EGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRT 272

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N MI      G ++EA+++ +KM  SG +P   TY+ LI+ Y  +G+  E+  +   M 
Sbjct: 273 YNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMV 332

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + K  KPN   Y+IL+  + +K ++ +  +++  M+  GI  +   +N L  AYA++G  
Sbjct: 333 R-KGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAV 391

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A     EM+ N +RP+  +   ++   CK G +EDA+    +M    + PN++ F SL
Sbjct: 392 DKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSL 451

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G   I +   V++    M   G+ PD +  +TIMD     G + + Q+ FD ++  G+
Sbjct: 452 IHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGV 511

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           +PD+  ++ L  GY   G+  ++   L  M   G+ P+   + ++++G+    +++ A++
Sbjct: 512 KPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALA 571

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           +Y +M    +     T   +L G  +A +   A EL   M ++G + +  T   V     
Sbjct: 572 LYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLC 631

Query: 427 AIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF 473
                 EA R+ +        +  +   I + ++ +   +  + S F
Sbjct: 632 ENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLF 678



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 207/423 (48%), Gaps = 3/423 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +FN ++  G          L+       R     +  +   K G +  ++  N +I    
Sbjct: 78  LFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLC 137

Query: 76  ESGNVDEAMK-IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK--NVK 132
           +    D+AM  +F++M + G  P   +YN LIKG     K +E+L+LL  M+ D   N  
Sbjct: 138 DGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCS 197

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           PN  +YN ++  +  +  +++A+ + ++M+  G+ PD VTYN+L     +     +A  +
Sbjct: 198 PNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAI 257

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           L  M +  V P+ RT  I++ GYC  G +E+A+R L +M    + P++V ++ LI+ +  
Sbjct: 258 LQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCK 317

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           I            M   G KP+   +  ++  +++ G +   +++ D M++ GI  +   
Sbjct: 318 IGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRA 377

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           F+IL   Y + G   KA +  T MR+ G+ P+VV ++TVI   C   +++ A+  + +M 
Sbjct: 378 FNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMV 437

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
             G++PN+ ++ +L+ G     +  + EEL   M  +G+ P    +  + D+    G   
Sbjct: 438 SEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVV 497

Query: 433 EAK 435
           EA+
Sbjct: 498 EAQ 500



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 165/336 (49%), Gaps = 1/336 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++IL   G+  +A Y FN ++ EG  P +I++T+L+  L     +K +  L  ++   G+
Sbjct: 417 IHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGI 476

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD+I  N +++   + G V EA   F  +   G KP   +YNTLI GY  VGK +ES+K
Sbjct: 477 HPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIK 536

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L  M     ++P+  TYN L+  +     +E+A  +  +M    ++  A+T N +    
Sbjct: 537 QLDRMVS-IGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGL 595

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G    A ++  +M +   +    T   ++ G C+   +++A+R    ++  E   ++
Sbjct: 596 FQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDV 655

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             F+ +I   L +   D      + M   G  PDV+T+S ++ +    GL+ +   +F  
Sbjct: 656 RTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLS 715

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           M K G   D H+ +I+ +  +  G+ ++A + LT +
Sbjct: 716 MEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKI 751



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/444 (22%), Positives = 200/444 (45%), Gaps = 7/444 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F+ ++ +G +P    Y  L+     +     +  L+  + +DG+  +   F
Sbjct: 319 GRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAF 378

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I A ++ G VD+AM  F +M+ +G +P   +Y+T+I      G+ E+++     M  
Sbjct: 379 NILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVS 438

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  + PN  ++  L+   CS    ++   + ++M+  GI PDA+  NT+     + G   
Sbjct: 439 E-GLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVV 497

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A+     + +  V+P+  +   ++ GYC  G M+++++ L RM  + + P+   +NSL+
Sbjct: 498 EAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLL 557

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            G+     +  V+ AL L  E     VK   +T + ++     AG +   +E++  MV  
Sbjct: 558 NGYFK---NGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDR 614

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G +  I  ++ +  G        +A  +   +R      +V  F+ VI+      ++  A
Sbjct: 615 GTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEA 674

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
            S++  M   G  P++ TY  ++  + E      ++ L   ME+ G       + ++   
Sbjct: 675 KSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRR 734

Query: 425 WRAIGLAREAKRVLKSAEEDRQSM 448
               G  R A   L   +E   S+
Sbjct: 735 LLEKGDVRRAGTYLTKIDEKNFSL 758



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/396 (22%), Positives = 184/396 (46%), Gaps = 28/396 (7%)

Query: 1   MNILVGKGKPHEAHYIFNCLI--------------------EEGHRPTLITYTTLVAALT 40
           +++++  G P E H  FN LI                    + G RP +++Y+T++  L 
Sbjct: 363 LDLMIRDGIPFE-HRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILC 421

Query: 41  RQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS 100
           +  R +  +   +++  +G+ P+ I F ++I+     G   +  ++  +M + G  P   
Sbjct: 422 KTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAI 481

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
             NT++      G+  E+     ++     VKP+  +YN L+  +C    ++E+   + +
Sbjct: 482 FMNTIMDNLCKEGRVVEAQDFFDMVIH-IGVKPDVVSYNTLIDGYCFVGKMDESIKQLDR 540

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           MV+ G++PD+ TYN+L   Y + G    A  +  EM    V+    T  I++ G  + G 
Sbjct: 541 MVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGR 600

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP---DVVT 277
           +  A     +M +      +  +N+++ G  +   +  VD+AL + E+   K    DV T
Sbjct: 601 IVAARELYMKMVDRGTQLRIETYNTVLGGLCE---NSCVDEALRMFEDLRSKEFELDVRT 657

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           FS +++A    G + + + +F  MV  G  PD+  +S++ K ++  G  ++++++  SM 
Sbjct: 658 FSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSME 717

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           K G   +  M   ++        ++RA +   K+ E
Sbjct: 718 KNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDE 753



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 157/339 (46%), Gaps = 11/339 (3%)

Query: 110 GNVGKPEESLKLL-QLMSQDK--NVKPNDRTYNILVRAWCS---KNSIEEAWNVVYKMVA 163
           G++G+ E++L L  +L+ Q +  +V   +    ++ RA  S   ++S   A ++   MV 
Sbjct: 26  GSLGR-EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVR 84

Query: 164 SGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED 223
           SG+   A     L R +   G    A            R    T   ++ G C     +D
Sbjct: 85  SGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDD 144

Query: 224 AMRFLYR-MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG---VKPDVVTFS 279
           AM  ++R M EL   P++  +N+LIKG    K S    + L  M   G     P+VV+++
Sbjct: 145 AMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYN 204

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
           T++D +   G + K   +F +M+  G+ PD+  ++ L  G  +A    KA +IL  M   
Sbjct: 205 TVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDK 264

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
           GV P+   +  +I G+C+  +++ A+ + +KM   G+ P++ TY  L+  Y +  +   A
Sbjct: 265 GVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEA 324

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             +   M  KG +P  +   ++   +   G   + + +L
Sbjct: 325 RSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLL 363



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 50/106 (47%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L+  G+  EA  +F+ ++  G  P +ITY+ ++ +   +   +   +L   +EK+G 
Sbjct: 662 INALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGC 721

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLI 106
             DS + N ++    E G+V  A     K+ +       ST   LI
Sbjct: 722 AADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLI 767


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 204/403 (50%), Gaps = 1/403 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  +F+ ++  G +P   TYTT++  L +         L  K+E+ G + + + +
Sbjct: 59  GKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTY 118

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +I++  +   V+EA+ IF  MK     PT  TY +LI+G  N  + +E+  LL  M+ 
Sbjct: 119 STLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTS 178

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
             N+ PN  T+N+LV  +C +  +  A  V+  M   G++PD VTYN+L   Y+ + E  
Sbjct: 179 -LNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVV 237

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++   M     +P+  +  I+++GYCK   +++A +    M      PN V +N+LI
Sbjct: 238 EARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLI 297

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G   +            M   G  P++ T++ ++D +   G +GK   +F  M    ++
Sbjct: 298 HGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLK 357

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P++ +++IL     ++G  + A  + + +   G+ PNV ++TT+I+G C    +  A+  
Sbjct: 358 PNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEA 417

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +  M + G  P+  +Y  ++ G+ + K   RA  L+  M ++G
Sbjct: 418 FRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRG 460



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 184/384 (47%), Gaps = 1/384 (0%)

Query: 55  VEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK 114
           +E  G+ P++   N +IN   +   VD    +  K    G +PT  T+ TLI G G VGK
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 115 PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYN 174
             ++++L   M   +  +P+D TY  ++   C       A  +  KM  +G Q + VTY+
Sbjct: 61  FAQAVELFDDMVA-RGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYS 119

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           TL  +  +Y     A  +   M+   + P   T   ++ G C     ++A   L  M  L
Sbjct: 120 TLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSL 179

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            + PN+V FN L+  F         +  L  M E GV+PDVVT++++M  +S    + + 
Sbjct: 180 NIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEA 239

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
           +++FD M+  G +PD+  +SIL  GY +A    +A+ +   M   G  PN V + T+I G
Sbjct: 240 RKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHG 299

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C   +++ A  +++ M   G  PNL TY  LL G+ +     +A  L + M+   ++P 
Sbjct: 300 LCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPN 359

Query: 415 KSTIQLVADSWRAIGLAREAKRVL 438
                ++ ++    G  ++A+ + 
Sbjct: 360 LVMYNILVNAMCKSGNLKDARELF 383



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 198/421 (47%), Gaps = 1/421 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P   T   L+    + +R     S+++K  K G++P  + F  +IN   + G   +A
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +++F  M   GC+P   TY T+I G   +G+   +  L + M ++   + N  TY+ L+ 
Sbjct: 65  VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKM-EEAGCQLNVVTYSTLIH 123

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C    + EA ++   M A  I P   TY +L +    +     A  +L EM +  + P
Sbjct: 124 SLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMP 183

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  T  ++V  +CKEG +  A   L  M E+ V P++V +NSL+ G+    +     K  
Sbjct: 184 NVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLF 243

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            +M   G KPDV ++S +++ +  A  + + +++F++M+  G  P+   ++ L  G  + 
Sbjct: 244 DVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQL 303

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G  ++A+ +  +M   G  PN+  +  ++ G+C    + +A  ++  M    + PNL  Y
Sbjct: 304 GRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMY 363

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             L+    ++     A EL   +   G++P       + +     GL  EA    ++ E+
Sbjct: 364 NILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMED 423

Query: 444 D 444
           D
Sbjct: 424 D 424



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/422 (25%), Positives = 208/422 (49%), Gaps = 8/422 (1%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
           I+ G +PT++T+TTL+  L +  +F   + L   +   G +PD   +  +IN   + G  
Sbjct: 37  IKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGET 96

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
             A  +F+KM+++GC+    TY+TLI       +  E+L +   M + K++ P   TY  
Sbjct: 97  ALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYM-KAKDISPTIFTYTS 155

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L++  C+ +  +EA  ++ +M +  I P+ VT+N L   + + G+   AE +L  M    
Sbjct: 156 LIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMG 215

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           V P+  T   ++ GY     + +A +    M      P++  ++ LI G+   K  D   
Sbjct: 216 VEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAK 275

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           +    M   G  P+ V+++T++      G + + Q++F +M   G  P+++ ++IL  G+
Sbjct: 276 QLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGF 335

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            + G   KA  +  +M+   + PN+VM+  +++  C +  ++ A  ++ ++  IG+ PN+
Sbjct: 336 CKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNV 395

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV-------ADSWRAIGLARE 433
           + Y T++ G  +      A E  + ME+ G  P + +  ++        D  RA+ L  E
Sbjct: 396 QIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGE 455

Query: 434 AK 435
            +
Sbjct: 456 MR 457



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 136/281 (48%), Gaps = 5/281 (1%)

Query: 1   MNILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
            N+LV     +GK   A  +   + E G  P ++TY +L+   +          L   + 
Sbjct: 188 FNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMI 247

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
             G KPD   ++ +IN   ++  +DEA ++F +M   G  P   +YNTLI G   +G+  
Sbjct: 248 TKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLR 307

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           E+  L + M  + N+ PN  TY IL+  +C +  + +A+ +   M ++ ++P+ V YN L
Sbjct: 308 EAQDLFKNMHTNGNL-PNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNIL 366

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
             A  + G    A ++  E+    ++PN +    I++G CKEG +++A+     M++   
Sbjct: 367 VNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGC 426

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
            P+   +N +I+GFL  KD       +  M + G   D  T
Sbjct: 427 PPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 225/452 (49%), Gaps = 10/452 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G    A  +F+ L      P  ITY+TL+  L +Q R    L L+ ++ + G++PD
Sbjct: 168 LCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPD 227

Query: 64  SILFNAMINACSESGNVDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
            + +NA++  C ++G  ++ M+++ K+ KD G +P  +TYN ++ G    G+ +E  ++ 
Sbjct: 228 VVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVW 287

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           + M  + N++P+  TY IL+   C    ++ A  V  +++ +G+  DA  YN+L + + Q
Sbjct: 288 ERMVAN-NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQ 346

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM-KELEVHPNLV 241
            G    A +         +R N RT  I++ G    G +++A+     + K++   P+ V
Sbjct: 347 AGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTV 405

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
            F +LI G      +   +KA T+ EE    G + DV ++S++++   + G +    +++
Sbjct: 406 TFGTLIHGLCQ---NGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVY 462

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           + M K G +P+ H+++ L  G+ +      A  I + M   G  P V+ + T+I G C A
Sbjct: 463 EKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKA 522

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            K Q A S+  +M E G  P++ TY +L+ G    K+   A  + + +  KG++      
Sbjct: 523 EKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMH 582

Query: 419 QLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            ++     + G   EA  V    +E +   PN
Sbjct: 583 NILIHGLCSAGKVDEALHVFSDMKEKKNCPPN 614



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 188/395 (47%), Gaps = 8/395 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P L TY  ++ +L  +      ++L   + +  + PD I ++ ++   ++   +D A+ +
Sbjct: 156 PNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDL 215

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M  SG +P    YN L+ G    G+ E+ +++   + +D   +PN  TYN+++   C
Sbjct: 216 LDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLC 275

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                +E   V  +MVA+ +QPD +TY  L     + G+   A ++  E+    +  +  
Sbjct: 276 KFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAA 335

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               +V G+C+ G +++A +F +         NL  +N +IKG     DS  VD+A+ L 
Sbjct: 336 MYNSLVKGFCQAGRVQEAWKF-WDSAGFAGLRNLRTYNIMIKGLF---DSGMVDEAIELW 391

Query: 267 E----EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           +    +    PD VTF T++      G   K   IF++   +G + D+  +S +  G   
Sbjct: 392 DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCN 451

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G    A  +   M K G  PN  ++  +ISG+C   +   A+ IY KM + G +P + T
Sbjct: 452 VGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVIT 511

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           Y TL+ G  +A++   A  + + M E G  P  +T
Sbjct: 512 YNTLIDGLCKAEKYQEASSVAREMVENGFTPDITT 546



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 92/407 (22%), Positives = 190/407 (46%), Gaps = 2/407 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  E   ++  ++    +P +ITY  L+  L R         + S++ K G+  D+ ++
Sbjct: 278 GRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMY 337

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N+++    ++G V EA K +     +G +    TYN +IKG  + G  +E+++L  L+ +
Sbjct: 338 NSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEK 396

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D    P+  T+  L+   C      +A+ +  +   SG Q D  +Y+++       G   
Sbjct: 397 DVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLV 456

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++  +M  +  +PN      ++SG+C+     DA+R   +M +    P ++ +N+LI
Sbjct: 457 DAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLI 516

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G    +           M E G  PD+ T+ +++    S   +     I+  ++  G++
Sbjct: 517 DGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLK 576

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMR-KYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            D+ + +IL  G   AG+  +A  + + M+ K    PN+V + T++ G      + +A +
Sbjct: 577 VDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAAT 636

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           ++  + E G+ P++ +Y T + G     +     +LL  +  +G+ P
Sbjct: 637 LWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIP 683



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 155/305 (50%), Gaps = 8/305 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P  +T+ TL+  L +        ++  +    G + D   +++MIN     G + +A+K+
Sbjct: 402 PDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKV 461

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           ++KM   GCKP +  YN LI G+  V +  +++++   M+ D    P   TYN L+   C
Sbjct: 462 YEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMA-DNGCSPTVITYNTLIDGLC 520

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                +EA +V  +MV +G  PD  TY +L R      +   A  +  ++    ++ +  
Sbjct: 521 KAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVM 580

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
              I++ G C  G +++A+     MKE +   PNLV +N+L+ G   + ++  +DKA TL
Sbjct: 581 MHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDG---LYETGYIDKAATL 637

Query: 266 ---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              + E G++PD+++++T +    S   + +  ++ D+++  GI P +  ++IL +  ++
Sbjct: 638 WTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697

Query: 323 AGEPQ 327
            G  Q
Sbjct: 698 YGPIQ 702



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/343 (22%), Positives = 157/343 (45%), Gaps = 39/343 (11%)

Query: 70  MINACSESGNVDEAMKIFQKMKD-SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           +++A S +   D A+  F+ +    GC P   ++N L+  +    +  ++      +S  
Sbjct: 89  VLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHG 148

Query: 129 ---KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
              + + PN +TYNI++R+ C++  ++ A  +   +    + PD +TY+TL    A+   
Sbjct: 149 AFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDR 208

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A  +L EM  + V+P+      ++ G  K G  E  MR               V++ 
Sbjct: 209 LDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMR---------------VWDK 253

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           L+K                   + G +P++ T++ ++D     G   +  E+++ MV   
Sbjct: 254 LVK-------------------DPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANN 294

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           ++PD+  + IL  G  R+G+   A  + + + K G+  +  M+ +++ G+C A ++Q A 
Sbjct: 295 LQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAW 354

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
             ++     G+  NL+TY  ++ G  ++     A EL  ++E+
Sbjct: 355 KFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEK 396



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 106/211 (50%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  I++ + + G  PT+ITY TL+  L + ++++   S+  ++ ++G  PD   + ++I
Sbjct: 492 DAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLI 551

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                   +D+A+ I++++   G K     +N LI G  + GK +E+L +   M + KN 
Sbjct: 552 RGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNC 611

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PN  TYN L+        I++A  +   +   G++PD ++YNT  +        +   Q
Sbjct: 612 PPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQ 671

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNME 222
           +L E+ +  + P   T  I+V    K G ++
Sbjct: 672 LLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/284 (21%), Positives = 125/284 (44%), Gaps = 37/284 (13%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G  ++A  IF      G +  + +Y++++  L    R    + +  K++KDG KP+
Sbjct: 414 LCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPN 473

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTT------------------------ 99
           S ++NA+I+   +     +A++I+ KM D+GC PT                         
Sbjct: 474 SHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAR 533

Query: 100 -----------STYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
                      +TY +LI+G  +  K +++L + + +   K +K +   +NIL+   CS 
Sbjct: 534 EMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILY-KGLKVDVMMHNILIHGLCSA 592

Query: 149 NSIEEAWNVVYKMV-ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
             ++EA +V   M       P+ VTYNTL     + G   +A  +   +  + + P+  +
Sbjct: 593 GKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIIS 652

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
               + G C    + + ++ L  +    + P ++ +N L++  +
Sbjct: 653 YNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVI 696



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 4/150 (2%)

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK--YG--VHPNVVMFTTVISGWCNAVK 360
           G  P I   + L   +VRA     A++   S+    +G  + PN+  +  V+   C    
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           + RA+++++ +    + P+  TY TL+ G  +  +   A +LL  M   GV+P       
Sbjct: 174 LDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNA 233

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           +       G   +  RV     +D  + PN
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPN 263


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 230/472 (48%), Gaps = 38/472 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA      ++E G  PTLITY+ LV  LTR KR      ++ ++ K G  P+ I++
Sbjct: 298 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 357

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-QLMS 126
           N +I++  E+G++++A++I   M   G   T+STYNTLIKGY   G+ + + +LL +++S
Sbjct: 358 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 417

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
              NV  N  ++  ++   CS    + A   V +M+   + P      TL     ++G+ 
Sbjct: 418 IGFNV--NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 475

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A ++ F+  N     + RT   ++ G C+ G +++A R    +       + V +N+L
Sbjct: 476 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 535

Query: 247 IKG------------FLD--------------------IKDSDGVDKALTLMEEF---GV 271
           I G            FLD                    + + + V++A+   ++    G+
Sbjct: 536 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 595

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            PDV T+S ++D    A    + QE FD+M+   ++P+  V++ L + Y R+G    A  
Sbjct: 596 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 655

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +   M+  G+ PN   +T++I G     +++ A  ++E+M   G+ PN+  Y  L+ GYG
Sbjct: 656 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYG 715

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           +  Q  + E LL+ M  K V P K T  ++   +   G   EA R+L    E
Sbjct: 716 KLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 767



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 211/452 (46%), Gaps = 36/452 (7%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  P +  +TT + A  +  + +  + L SK+E+ G+ P+ + FN +I+     G  DE
Sbjct: 243 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 302

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A    +KM + G +PT  TY+ L+KG     +  ++  +L+ M++ K   PN   YN L+
Sbjct: 303 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK-KGFPPNVIVYNNLI 361

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
            ++    S+ +A  +   MV+ G+   + TYNTL + Y + G+   AE++L EM +    
Sbjct: 362 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 421

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI--------------- 247
            N+ +   ++   C     + A+RF+  M    + P   +  +LI               
Sbjct: 422 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 481

Query: 248 ------KGF-LDIKDSD----GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC-- 294
                 KGF +D + S+    G+ +A  L E F ++ +++    +MD  S   L+  C  
Sbjct: 482 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 541

Query: 295 ----QEIF---DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
                E F   D+MVK G++PD + +SIL  G     + ++A       ++ G+ P+V  
Sbjct: 542 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 601

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           ++ +I G C A + +     +++M    + PN   Y  L+  Y  + +   A EL + M+
Sbjct: 602 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 661

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            KG+ P  +T   +      I    EAK + +
Sbjct: 662 HKGISPNSATYTSLIKGMSIISRVEEAKLLFE 693



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 182/386 (47%), Gaps = 7/386 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+   A  +   ++  G      ++T+++  L     F S L  + ++    M P   L 
Sbjct: 403 GQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLL 462

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+   + G   +A++++ +  + G    T T N L+ G    GK +E+ ++ Q    
Sbjct: 463 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI-QKEIL 521

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            +    +  +YN L+   C K  ++EA+  + +MV  G++PD  TY+ L        +  
Sbjct: 522 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 581

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A Q   + + N + P+  T  +++ G CK    E+   F   M    V PN VV+N LI
Sbjct: 582 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 641

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           + +     S  +  AL L E+    G+ P+  T+++++   S    + + + +F++M   
Sbjct: 642 RAYCR---SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME 698

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+EP++  ++ L  GY + G+  K E +L  M    VHPN + +T +I G+     +  A
Sbjct: 699 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 758

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGY 390
             +  +M E GI P+  TY+  ++GY
Sbjct: 759 SRLLNEMREKGIVPDSITYKEFIYGY 784



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 126/246 (51%), Gaps = 1/246 (0%)

Query: 6   GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
           GK K  EA    + +++ G +P   TY+ L+  L    + +  +      +++GM PD  
Sbjct: 541 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 600

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            ++ MI+ C ++   +E  + F +M     +P T  YN LI+ Y   G+   +L+L + M
Sbjct: 601 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 660

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
            + K + PN  TY  L++     + +EEA  +  +M   G++P+   Y  L   Y + G+
Sbjct: 661 -KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 719

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
             + E +L EM +  V PN+ T  +++ GY ++GN+ +A R L  M+E  + P+ + +  
Sbjct: 720 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 779

Query: 246 LIKGFL 251
            I G+L
Sbjct: 780 FIYGYL 785



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/410 (23%), Positives = 174/410 (42%), Gaps = 45/410 (10%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  L  +G  P+  T   L+ +L R   F+        V K G+ PD  LF   INA  
Sbjct: 202 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFC 260

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G V+EA+K+F KM+++G  P   T+NT+I G G  G+ +E+    + M + + ++P  
Sbjct: 261 KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE-RGMEPTL 319

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY+ILV+       I +A+ V+ +M   G  P+ + YN L  ++ + G   +A ++   
Sbjct: 320 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI--- 376

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV----FNSLIKGFL 251
                                               K+L V   L +    +N+LIKG+ 
Sbjct: 377 ------------------------------------KDLMVSKGLSLTSSTYNTLIKGYC 400

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
               +D  ++ L  M   G   +  +F++++    S  +         +M+   + P   
Sbjct: 401 KNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG 460

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
           + + L  G  + G+  KA  +       G   +      ++ G C A K+  A  I +++
Sbjct: 461 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 520

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
              G   +  +Y TL+ G    K+   A   L  M ++G++P   T  ++
Sbjct: 521 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 570



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 145/321 (45%), Gaps = 1/321 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK  +A  ++   + +G      T   L+  L    +      +  ++   G   D
Sbjct: 469 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 528

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +I+ C     +DEA     +M   G KP   TY+ LI G  N+ K EE+++   
Sbjct: 529 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 588

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
              ++  + P+  TY++++   C     EE      +M++  +QP+ V YN L RAY + 
Sbjct: 589 DCKRN-GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 647

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A ++  +M++  + PN  T   ++ G      +E+A      M+   + PN+  +
Sbjct: 648 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 707

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            +LI G+  +     V+  L  M    V P+ +T++ ++  ++  G + +   + ++M +
Sbjct: 708 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 767

Query: 304 AGIEPDIHVFSILAKGYVRAG 324
            GI PD   +     GY++ G
Sbjct: 768 KGIVPDSITYKEFIYGYLKQG 788



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 141/315 (44%), Gaps = 7/315 (2%)

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIE---EAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           +K + P+  T NIL+ +    N  +   EA++VV K    G+ PD   + T   A+ + G
Sbjct: 208 NKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK----GVSPDVYLFTTAINAFCKGG 263

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +   A ++  +M+   V PN  T   ++ G    G  ++A  F  +M E  + P L+ ++
Sbjct: 264 KVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYS 323

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            L+KG    K        L  M + G  P+V+ ++ ++D++  AG + K  EI D MV  
Sbjct: 324 ILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK 383

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+      ++ L KGY + G+   AE +L  M   G + N   FT+VI   C+ +    A
Sbjct: 384 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 443

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           +    +M    ++P      TL+ G  +  +  +A EL      KG      T   +   
Sbjct: 444 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 503

Query: 425 WRAIGLAREAKRVLK 439
               G   EA R+ K
Sbjct: 504 LCEAGKLDEAFRIQK 518



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 103/203 (50%), Gaps = 1/203 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P + TY+ ++    + +R +       ++    ++P+++++N +I A   SG +  A
Sbjct: 594 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 653

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +++ + MK  G  P ++TY +LIKG   + + EE+  L + M  +  ++PN   Y  L+ 
Sbjct: 654 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALID 712

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +     + +   ++ +M +  + P+ +TY  +   YA+ G    A ++L EM+   + P
Sbjct: 713 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 772

Query: 204 NERTCGIIVSGYCKEGNMEDAMR 226
           +  T    + GY K+G + +A +
Sbjct: 773 DSITYKEFIYGYLKQGGVLEAFK 795


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 215/402 (53%), Gaps = 1/402 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L+ +G+  +A+ +F+ +++ G  P ++TY+++++AL++ +       + +++ K+G+
Sbjct: 214 INGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGV 273

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I++ ++++    SG   EA+ IF+KM   G +P   TY  L+      GK  E+ K
Sbjct: 274 MPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARK 333

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   + + +  KP+  TY  L+  + ++ ++ E  +++  M+  G+Q     +N +  AY
Sbjct: 334 IFDSLVK-RGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAY 392

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A++ +   A  +   M+   + P+    G ++   C  G ++DA+     +K   + PN+
Sbjct: 393 AKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNI 452

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           VVF +LI G       D V++    M + G+  D + F+ IM      G + + + +FD 
Sbjct: 453 VVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDL 512

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ GIEP+ + ++ L  GY   G+  +A  +L  M   GV P+ V + T+I+G+    +
Sbjct: 513 MVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGR 572

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           ++  +++  +M   G+NP + TYE LL G  +A +   A+EL
Sbjct: 573 IEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKEL 614



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 202/413 (48%), Gaps = 9/413 (2%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
           ++ YTT++  L R+ +     SL   +   G  PD + ++++I+A S++  +D+A ++F 
Sbjct: 207 VVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFT 266

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
           +M  +G  P    Y +L+ GY + GKP+E++ + + M +   V+P+  TY  L+   C  
Sbjct: 267 RMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCR-HGVEPDVVTYTALMDYLCKN 325

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
               EA  +   +V  G +PD+ TY TL   YA  G       +L  M    ++      
Sbjct: 326 GKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIF 385

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG-VDKALTLME 267
            +I+  Y K   +++A+     M++  ++P++V + ++    LDI  + G VD AL+   
Sbjct: 386 NMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTV----LDILCTAGRVDDALSQFN 441

Query: 268 EF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
                G+ P++V F+T++    +     K +E+  +M+  GI  D   F+ +     + G
Sbjct: 442 SLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKG 501

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              +A+++   M + G+ PN   + T+I G+C   KM  AM +   M   G+ P+  TY 
Sbjct: 502 RVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYN 561

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           T++ GY +  +      LL+ M+ KGV P   T +++       G    AK +
Sbjct: 562 TIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKEL 614



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 196/426 (46%), Gaps = 9/426 (2%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLIS-KVEKDGMKP-DSILFNAMINACSESGN 79
           E G +P L +YT L+  L   K  +  L L+    +  G  P D + +  +IN     G 
Sbjct: 163 ELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQ 222

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D+A  +F  M D G  P   TY+++I         +++ ++   M ++  V P+   Y 
Sbjct: 223 LDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKN-GVMPDCIMYT 281

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            LV  +CS    +EA  +  KM   G++PD VTY  L     + G++  A ++   +   
Sbjct: 282 SLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKR 341

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
             +P+  T G ++ GY  EG + +    L  M +  +     +FN ++  +      + V
Sbjct: 342 GHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAY---AKHNKV 398

Query: 260 DKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           D+AL +   M + G+ PD+V + T++D   +AG +      F+ +   G+ P+I VF+ L
Sbjct: 399 DEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTL 458

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G     +  K E +   M   G+  + + F  ++   C   ++  A ++++ M  IGI
Sbjct: 459 IHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGI 518

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            PN  TY TL+ GY    +   A +LL VM   GV+P   T   + + +   G   +   
Sbjct: 519 EPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLT 578

Query: 437 VLKSAE 442
           +L+  +
Sbjct: 579 LLREMD 584



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 93/443 (20%), Positives = 205/443 (46%), Gaps = 41/443 (9%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM---KPDSI 65
           +P +AH +F+ L++ G R ++      ++ + R     +I SL +++ + G     P+  
Sbjct: 42  EPGDAHQVFDRLLKRGDRASIFDLNRALSDVARASPAVAI-SLFNRMPRAGATSAAPNIA 100

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            +  +I  C   G +D A     ++  +G + +   ++ L+KG  +  +  +++ ++   
Sbjct: 101 TYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRR 160

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVY-------------------------- 159
             +   KP+  +Y IL++  C   + ++A ++++                          
Sbjct: 161 MPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLRE 220

Query: 160 -----------KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
                       M+  G  PD VTY+++  A ++     +A Q+   M  N V P+    
Sbjct: 221 GQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMY 280

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             +V GYC  G  ++A+    +M    V P++V + +L+        S    K    + +
Sbjct: 281 TSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVK 340

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G KPD  T+ T++  +++ G + +  ++ D M+K G++   H+F+++   Y +  +  +
Sbjct: 341 RGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDE 400

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  + ++MR+ G++P++V + TV+   C A ++  A+S +  +   G+ PN+  + TL+ 
Sbjct: 401 ALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIH 460

Query: 389 GYGEAKQPWRAEELLQVMEEKGV 411
           G     +  + EEL   M ++G+
Sbjct: 461 GLCTCDKWDKVEELAFEMIDRGI 483



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 160/363 (44%), Gaps = 36/363 (9%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F  +++ G  P  I YT+LV       + K  + +  K+ + G++PD + + A++
Sbjct: 260 KATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALM 319

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   ++G   EA KIF  +   G KP ++TY TL+ GY   G   E   LL LM + K +
Sbjct: 320 DYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMK-KGM 378

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA-- 189
           +     +N+++ A+   N ++EA  V   M   G+ PD V Y T+       G    A  
Sbjct: 379 QLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALS 438

Query: 190 ---------------------------------EQMLFEMQNNQVRPNERTCGIIVSGYC 216
                                            E++ FEM +  +  +      I+   C
Sbjct: 439 QFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLC 498

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           K+G + +A      M  + + PN   +N+LI G+      D   K L +M   GVKP  V
Sbjct: 499 KKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDV 558

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T++TI++ +S  G +     +  +M   G+ P I  + +L +G  +AG    A+ +   M
Sbjct: 559 TYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 618

Query: 337 RKY 339
            K+
Sbjct: 619 IKW 621



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 9/144 (6%)

Query: 297 IFDDMVKAGI---EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
           +F+ M +AG     P+I  + I+     R G    A + +  +   G+  + ++F+ ++ 
Sbjct: 83  LFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLK 142

Query: 354 GWCNAVKMQRAMSI-YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM-EEKGV 411
           G C+  +   AM I   +M E+G  P+L +Y  LL G  + K   +A +LL +M + KG 
Sbjct: 143 GLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGR 202

Query: 412 RPKKSTIQLVADSWRAIGLAREAK 435
            P    + +VA +    GL RE +
Sbjct: 203 CP----LDVVAYTTVINGLLREGQ 222


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 204/396 (51%), Gaps = 1/396 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+L  +GK  +A      +   G +P ++TY T+V       R ++  ++++ +++  +
Sbjct: 228 INVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKI 287

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PDS  + ++I+   + G ++EA KIF++M   G +P+   YNTLI G+ N G  + +  
Sbjct: 288 EPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASA 347

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M + K + P   TYN L+ A   +   +EA  ++ ++   GI PDA+TYN L   Y
Sbjct: 348 YKDEMLK-KGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGY 406

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +     +A  +  EM  + ++P ++T   ++    K+  M++A     ++    V P++
Sbjct: 407 CRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDV 466

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           ++FN+LI G     +  G  + L  M+   V PD VTF+TIM      G + + +E+FD+
Sbjct: 467 IMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDE 526

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M + GI+PD   F+ L  GY R G+ + A  +   M   G +P V+ +  ++ G C   +
Sbjct: 527 MKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQE 586

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
              A  + ++M   G+ P+  TY TL+ G  +   P
Sbjct: 587 GDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIP 622



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 208/413 (50%), Gaps = 7/413 (1%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           + ++ T+  ++  L ++ + K     +  +E  G+KP+ + +N +++    SG V+ A  
Sbjct: 218 KSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADA 277

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           I   MK    +P + TY +LI G    G+ EE+ K+ + M Q K ++P+   YN L+  +
Sbjct: 278 ILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQ-KGLRPSAVIYNTLIDGF 336

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C+K +++ A     +M+  GI P   TYN+L  A      T  AE M+ E+Q   + P+ 
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDA 396

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD---IKDSDGVDKA 262
            T  I+++GYC+  N + A      M    + P    + SL+        +K++D + K 
Sbjct: 397 ITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           +T     GV PDV+ F+ ++D   S   +    E+  DM +  + PD   F+ + +G+ R
Sbjct: 457 IT---SEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCR 513

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G+ ++A  +   M++ G+ P+ + F T+ISG+     ++ A  +  +M + G NP + T
Sbjct: 514 EGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLT 573

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           Y  L+ G  + ++   AEELL+ M  KG+ P  +T   + +    + +  E K
Sbjct: 574 YNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENK 626



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 188/408 (46%), Gaps = 34/408 (8%)

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL-- 121
           SI+F+ +I +C +    DEA + F  MK+ G  PT  T N+L+  +  + + E +  L  
Sbjct: 151 SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYA 210

Query: 122 ----LQLMS----------------------------QDKNVKPNDRTYNILVRAWCSKN 149
               L++ S                            +   VKPN  TYN +V  +CS  
Sbjct: 211 EMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSG 270

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            +E A  ++  M    I+PD+ TY +L     + G    A ++  EM    +RP+     
Sbjct: 271 RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYN 330

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            ++ G+C +GN++ A  +   M +  + P +  +NSLI      + +D  +  +  ++E 
Sbjct: 331 TLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK 390

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G+ PD +T++ +++ +       K   + D+M+ +GI+P    ++ L     +    ++A
Sbjct: 391 GISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEA 450

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           + +   +   GV P+V+MF  +I G C+   ++ A  + + M  + + P+  T+ T++ G
Sbjct: 451 DDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQG 510

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           +    +   A EL   M+ +G++P   +   +   +   G  ++A RV
Sbjct: 511 HCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRV 558



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 170/359 (47%), Gaps = 5/359 (1%)

Query: 102 YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
           ++ LIK   ++ + +E+ +    M ++K V P   T N L+  +   N  E AW +  +M
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTM-KEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212

Query: 162 VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM 221
               I+    T+N +     + G+  +A+  +  M+ + V+PN  T   IV GYC  G +
Sbjct: 213 FRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRV 272

Query: 222 EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
           E A   L  MK  ++ P+   + SLI G       +   K    M + G++P  V ++T+
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +D + + G +       D+M+K GI P +  ++ L           +AE ++  +++ G+
Sbjct: 333 IDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGI 392

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
            P+ + +  +I+G+C     ++A  ++++M   GI P  KTY +LL    +  +   A++
Sbjct: 393 SPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADD 452

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESI 460
           L + +  +GV P       + D   +    + A  +LK  + DR  +P   DE+   +I
Sbjct: 453 LFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLK--DMDRMKVP--PDEVTFNTI 507



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 59/112 (52%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  EA  +F+ +   G +P  I++ TL++  +R+   K    + +++   G  P  + 
Sbjct: 514 EGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLT 573

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           +NA++    ++   D A ++ ++M   G  P  +TY TLI+G   V  P+E+
Sbjct: 574 YNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDEN 625


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 197/396 (49%), Gaps = 1/396 (0%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           T+T+++  L  + RF S L  I ++     KP+  L   +++   ++G   EA++++ ++
Sbjct: 374 TFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRL 433

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
            + G    T T N LI G    G  EE+ KLL+ M  ++ +  +  +YN L+ A C +  
Sbjct: 434 LEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEM-LERGLVLDSISYNTLILACCKEGK 492

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           +EE + +  +MV  GIQPD  TYN L       G+   A  +  E + N   P+  T GI
Sbjct: 493 VEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGI 552

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++ GYCK   +E+  +    M  +++  N VV+ +LI+ + +  +     +    M   G
Sbjct: 553 MIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRG 612

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           +     T+S+++   S+ GL+    ++ D+M K G+ P++  ++ L  GY + G+  K +
Sbjct: 613 IPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVD 672

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           SIL  M    VHPN + +T +I+G C    M+ A  +  +M + GI P+  TY  L  G+
Sbjct: 673 SILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGF 732

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
            +  +   A ++  +M   G+     T   + D W 
Sbjct: 733 CKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWH 768



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 224/473 (47%), Gaps = 37/473 (7%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           ++ +F+ +   G  P +  ++T+V A     R    + L  K+EK G+ P+ + +N +I+
Sbjct: 181 SYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIH 240

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              ++G +DEA +  +KM+    KP+  TY  LI G   + + +E+  +L+ MS D+   
Sbjct: 241 GLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMS-DRGYA 299

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           PN+  YN L+  +C   +I  A  +   M+++GI P++VT N+L + Y +  +   AE +
Sbjct: 300 PNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHL 359

Query: 193 LFEMQN-----NQ------------------------------VRPNERTCGIIVSGYCK 217
           L EM       NQ                               +PN+    ++VSG C+
Sbjct: 360 LEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQ 419

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
            G   +A+   YR+ E     N V  N+LI G  +    +   K L  M E G+  D ++
Sbjct: 420 NGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSIS 479

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           ++T++ A    G + +  ++ ++MV+ GI+PD++ +++L  G    G+ ++A  +    +
Sbjct: 480 YNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECK 539

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
           K G  P+   +  +I G+C A +++    ++++M  + I  N   Y TL+  Y E     
Sbjct: 540 KNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMR 599

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            A  L   M  +G+    +T   +      IGL   A ++L    ++  S PN
Sbjct: 600 EAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLS-PN 651



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/503 (23%), Positives = 210/503 (41%), Gaps = 69/503 (13%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  EA      + +E  +P+L+TY  L+  L + +RF     ++ ++   G  P+
Sbjct: 242 LCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPN 301

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++++N +I+     GN+  A++I   M  +G  P + T N+LI+GY    + E +  LL+
Sbjct: 302 NVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLE 361

Query: 124 LMSQD----------------------------------KNVKPNDRTYNILVRAWCSKN 149
            M                                     +N KPND    +LV   C   
Sbjct: 362 EMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNG 421

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
              EA  + Y+++  G   + VT N L     + G    A ++L EM    +  +  +  
Sbjct: 422 KQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYN 481

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            ++   CKEG +E+  +    M    + P++  +N L+ G  ++   +         ++ 
Sbjct: 482 TLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKN 541

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE---- 325
           G  PD  T+  ++D +  A  + + +++F +MV   IE +  V+  L + Y   G     
Sbjct: 542 GNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREA 601

Query: 326 ------------PQ-------------------KAESILTSMRKYGVHPNVVMFTTVISG 354
                       PQ                    A  +L  MRK G+ PNVV +T +I G
Sbjct: 602 FRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGG 661

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
           +C   +M +  SI ++M    ++PN  TY  ++ G+ +      A +LL  M +KG+ P 
Sbjct: 662 YCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPD 721

Query: 415 KSTIQLVADSWRAIGLAREAKRV 437
             T   + + +   G   EA +V
Sbjct: 722 AVTYNALTNGFCKEGKMEEALKV 744



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 182/421 (43%), Gaps = 26/421 (6%)

Query: 42  QKRFKSILSLISKVEKDGMKPDSILFN--------AMINACSESGNVDEAMKIFQKMKDS 93
           Q    S+ S++S    D  K   +L +          +   S + N   A   F    ++
Sbjct: 57  QSLINSVFSILSNPSFDSSKSKQLLLHLSPHEFDQCFLAIGSNNVNPRTAFNFFHFASET 116

Query: 94  GCKPTTST---------YNTLIK--GYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
             +P  +          Y+T  K  G+G V       +L  L++ +K + P+ +T N L+
Sbjct: 117 LFEPAVAVTVVDLLIHVYSTQFKHLGFGVV------FELFSLLA-NKGLFPSLKTCNFLL 169

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
            +    N ++ ++ V   M   G+ PD   ++T+  A+   G    A ++  +M+   V 
Sbjct: 170 SSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVA 229

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           PN  T   I+ G CK G +++A +F  +M++  V P+LV +  LI G + ++  D  +  
Sbjct: 230 PNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCI 289

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           L  M + G  P+ V ++T++D +   G +    +I DDM+  GI P+    + L +GY +
Sbjct: 290 LKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCK 349

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           + + + AE +L  M   G   N   FT+VI   C   +   A+    +M      PN   
Sbjct: 350 SNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGL 409

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
              L+ G  +  +   A EL   + EKG      T   +       G   EA ++LK   
Sbjct: 410 LTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEML 469

Query: 443 E 443
           E
Sbjct: 470 E 470



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 36/220 (16%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           + Y TL+ A       +    L   +   G+   S  ++++I+  S  G VD A ++  +
Sbjct: 583 VVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDE 642

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M+  G  P    Y  LI GY  +G+  +   +LQ MS + NV PN  TY I++   C   
Sbjct: 643 MRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSIN-NVHPNKITYTIMINGHCKLG 701

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
           +++ A  ++ +M   GI PDAVTYN L                                 
Sbjct: 702 NMKAAAKLLNEMAQKGIVPDAVTYNALT-------------------------------- 729

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
              +G+CKEG ME+A++    M    +  + + + +LI G
Sbjct: 730 ---NGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDG 766



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 1/169 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA  + + +   G   T  TY++L+  L+      S   L+ ++ K+G+ P+ + +
Sbjct: 596 GNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCY 655

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            A+I    + G + +   I Q+M  +   P   TY  +I G+  +G  + + KLL  M+Q
Sbjct: 656 TALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQ 715

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
            K + P+  TYN L   +C +  +EEA  V   M   GI  D +TY TL
Sbjct: 716 -KGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTL 763



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 1/138 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A+ + + + +EG  P ++ YT L+    +  +   + S++ ++  + + P+ I +
Sbjct: 631 GLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITY 690

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             MIN   + GN+  A K+  +M   G  P   TYN L  G+   GK EE+LK+  LMS 
Sbjct: 691 TIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMST 750

Query: 128 DKNVKPNDRTYNILVRAW 145
              +  +D TY  L+  W
Sbjct: 751 G-GISLDDITYTTLIDGW 767



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 78/155 (50%), Gaps = 1/155 (0%)

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           E+F  +   G+ P +   + L    V+A E + +  +   M   GV P+V +F+T+++ +
Sbjct: 148 ELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAF 207

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C   ++  A+ ++ KM ++G+ PN+ TY  ++ G  +  +   A +  + ME++ V+P  
Sbjct: 208 CTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSL 267

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            T  ++ +    +    EA  +LK    DR   PN
Sbjct: 268 VTYGVLINGLVKLERFDEANCILKEM-SDRGYAPN 301


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 230/472 (48%), Gaps = 38/472 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA      ++E G  PTLITY+ LV  LTR KR      ++ ++ K G  P+ I++
Sbjct: 322 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 381

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-QLMS 126
           N +I++  E+G++++A++I   M   G   T+STYNTLIKGY   G+ + + +LL +++S
Sbjct: 382 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 441

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
              NV  N  ++  ++   CS    + A   V +M+   + P      TL     ++G+ 
Sbjct: 442 IGFNV--NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 499

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A ++ F+  N     + RT   ++ G C+ G +++A R    +       + V +N+L
Sbjct: 500 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 559

Query: 247 IKG------------FLD--------------------IKDSDGVDKALTLMEEF---GV 271
           I G            FLD                    + + + V++A+   ++    G+
Sbjct: 560 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 619

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            PDV T+S ++D    A    + QE FD+M+   ++P+  V++ L + Y R+G    A  
Sbjct: 620 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 679

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +   M+  G+ PN   +T++I G     +++ A  ++E+M   G+ PN+  Y  L+ GYG
Sbjct: 680 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYG 739

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           +  Q  + E LL+ M  K V P K T  ++   +   G   EA R+L    E
Sbjct: 740 KLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 791



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 211/452 (46%), Gaps = 36/452 (7%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  P +  +TT + A  +  + +  + L SK+E+ G+ P+ + FN +I+     G  DE
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 326

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A    +KM + G +PT  TY+ L+KG     +  ++  +L+ M++ K   PN   YN L+
Sbjct: 327 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK-KGFPPNVIVYNNLI 385

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
            ++    S+ +A  +   MV+ G+   + TYNTL + Y + G+   AE++L EM +    
Sbjct: 386 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 445

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI--------------- 247
            N+ +   ++   C     + A+RF+  M    + P   +  +LI               
Sbjct: 446 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 505

Query: 248 ------KGF-LDIKDSD----GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC-- 294
                 KGF +D + S+    G+ +A  L E F ++ +++    +MD  S   L+  C  
Sbjct: 506 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 565

Query: 295 ----QEIF---DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
                E F   D+MVK G++PD + +SIL  G     + ++A       ++ G+ P+V  
Sbjct: 566 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 625

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           ++ +I G C A + +     +++M    + PN   Y  L+  Y  + +   A EL + M+
Sbjct: 626 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 685

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            KG+ P  +T   +      I    EAK + +
Sbjct: 686 HKGISPNSATYTSLIKGMSIISRVEEAKLLFE 717



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 182/386 (47%), Gaps = 7/386 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+   A  +   ++  G      ++T+++  L     F S L  + ++    M P   L 
Sbjct: 427 GQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLL 486

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+   + G   +A++++ +  + G    T T N L+ G    GK +E+ ++ Q    
Sbjct: 487 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI-QKEIL 545

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            +    +  +YN L+   C K  ++EA+  + +MV  G++PD  TY+ L        +  
Sbjct: 546 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 605

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A Q   + + N + P+  T  +++ G CK    E+   F   M    V PN VV+N LI
Sbjct: 606 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 665

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           + +     S  +  AL L E+    G+ P+  T+++++   S    + + + +F++M   
Sbjct: 666 RAYCR---SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME 722

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+EP++  ++ L  GY + G+  K E +L  M    VHPN + +T +I G+     +  A
Sbjct: 723 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 782

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGY 390
             +  +M E GI P+  TY+  ++GY
Sbjct: 783 SRLLNEMREKGIVPDSITYKEFIYGY 808



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 126/246 (51%), Gaps = 1/246 (0%)

Query: 6   GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
           GK K  EA    + +++ G +P   TY+ L+  L    + +  +      +++GM PD  
Sbjct: 565 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 624

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            ++ MI+ C ++   +E  + F +M     +P T  YN LI+ Y   G+   +L+L + M
Sbjct: 625 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 684

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
            + K + PN  TY  L++     + +EEA  +  +M   G++P+   Y  L   Y + G+
Sbjct: 685 -KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 743

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
             + E +L EM +  V PN+ T  +++ GY ++GN+ +A R L  M+E  + P+ + +  
Sbjct: 744 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 803

Query: 246 LIKGFL 251
            I G+L
Sbjct: 804 FIYGYL 809



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/410 (23%), Positives = 174/410 (42%), Gaps = 45/410 (10%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  L  +G  P+  T   L+ +L R   F+        V K G+ PD  LF   INA  
Sbjct: 226 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFC 284

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G V+EA+K+F KM+++G  P   T+NT+I G G  G+ +E+    + M + + ++P  
Sbjct: 285 KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE-RGMEPTL 343

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY+ILV+       I +A+ V+ +M   G  P+ + YN L  ++ + G   +A ++   
Sbjct: 344 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI--- 400

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV----FNSLIKGFL 251
                                               K+L V   L +    +N+LIKG+ 
Sbjct: 401 ------------------------------------KDLMVSKGLSLTSSTYNTLIKGYC 424

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
               +D  ++ L  M   G   +  +F++++    S  +         +M+   + P   
Sbjct: 425 KNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG 484

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
           + + L  G  + G+  KA  +       G   +      ++ G C A K+  A  I +++
Sbjct: 485 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 544

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
              G   +  +Y TL+ G    K+   A   L  M ++G++P   T  ++
Sbjct: 545 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 594



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 145/321 (45%), Gaps = 1/321 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK  +A  ++   + +G      T   L+  L    +      +  ++   G   D
Sbjct: 493 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 552

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +I+ C     +DEA     +M   G KP   TY+ LI G  N+ K EE+++   
Sbjct: 553 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 612

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
              ++  + P+  TY++++   C     EE      +M++  +QP+ V YN L RAY + 
Sbjct: 613 DCKRN-GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 671

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A ++  +M++  + PN  T   ++ G      +E+A      M+   + PN+  +
Sbjct: 672 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 731

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            +LI G+  +     V+  L  M    V P+ +T++ ++  ++  G + +   + ++M +
Sbjct: 732 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 791

Query: 304 AGIEPDIHVFSILAKGYVRAG 324
            GI PD   +     GY++ G
Sbjct: 792 KGIVPDSITYKEFIYGYLKQG 812



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 141/315 (44%), Gaps = 7/315 (2%)

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIE---EAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           +K + P+  T NIL+ +    N  +   EA++VV K    G+ PD   + T   A+ + G
Sbjct: 232 NKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK----GVSPDVYLFTTAINAFCKGG 287

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +   A ++  +M+   V PN  T   ++ G    G  ++A  F  +M E  + P L+ ++
Sbjct: 288 KVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYS 347

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            L+KG    K        L  M + G  P+V+ ++ ++D++  AG + K  EI D MV  
Sbjct: 348 ILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK 407

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+      ++ L KGY + G+   AE +L  M   G + N   FT+VI   C+ +    A
Sbjct: 408 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 467

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           +    +M    ++P      TL+ G  +  +  +A EL      KG      T   +   
Sbjct: 468 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 527

Query: 425 WRAIGLAREAKRVLK 439
               G   EA R+ K
Sbjct: 528 LCEAGKLDEAFRIQK 542



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 103/203 (50%), Gaps = 1/203 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P + TY+ ++    + +R +       ++    ++P+++++N +I A   SG +  A
Sbjct: 618 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 677

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +++ + MK  G  P ++TY +LIKG   + + EE+  L + M  +  ++PN   Y  L+ 
Sbjct: 678 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALID 736

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +     + +   ++ +M +  + P+ +TY  +   YA+ G    A ++L EM+   + P
Sbjct: 737 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 796

Query: 204 NERTCGIIVSGYCKEGNMEDAMR 226
           +  T    + GY K+G + +A +
Sbjct: 797 DSITYKEFIYGYLKQGGVLEAFK 819


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 230/472 (48%), Gaps = 38/472 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA      ++E G  PTLITY+ LV  LTR KR      ++ ++ K G  P+ I++
Sbjct: 309 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 368

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-QLMS 126
           N +I++  E+G++++A++I   M   G   T+STYNTLIKGY   G+ + + +LL +++S
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
              NV  N  ++  ++   CS    + A   V +M+   + P      TL     ++G+ 
Sbjct: 429 IGFNV--NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 486

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A ++ F+  N     + RT   ++ G C+ G +++A R    +       + V +N+L
Sbjct: 487 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 546

Query: 247 IKG------------FLD--------------------IKDSDGVDKALTLMEEF---GV 271
           I G            FLD                    + + + V++A+   ++    G+
Sbjct: 547 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 606

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            PDV T+S ++D    A    + QE FD+M+   ++P+  V++ L + Y R+G    A  
Sbjct: 607 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 666

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +   M+  G+ PN   +T++I G     +++ A  ++E+M   G+ PN+  Y  L+ GYG
Sbjct: 667 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYG 726

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           +  Q  + E LL+ M  K V P K T  ++   +   G   EA R+L    E
Sbjct: 727 KLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 778



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 211/452 (46%), Gaps = 36/452 (7%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  P +  +TT + A  +  + +  + L SK+E+ G+ P+ + FN +I+     G  DE
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A    +KM + G +PT  TY+ L+KG     +  ++  +L+ M++ K   PN   YN L+
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK-KGFPPNVIVYNNLI 372

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
            ++    S+ +A  +   MV+ G+   + TYNTL + Y + G+   AE++L EM +    
Sbjct: 373 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI--------------- 247
            N+ +   ++   C     + A+RF+  M    + P   +  +LI               
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492

Query: 248 ------KGF-LDIKDSD----GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC-- 294
                 KGF +D + S+    G+ +A  L E F ++ +++    +MD  S   L+  C  
Sbjct: 493 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 552

Query: 295 ----QEIF---DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
                E F   D+MVK G++PD + +SIL  G     + ++A       ++ G+ P+V  
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           ++ +I G C A + +     +++M    + PN   Y  L+  Y  + +   A EL + M+
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            KG+ P  +T   +      I    EAK + +
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFE 704



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 182/386 (47%), Gaps = 7/386 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+   A  +   ++  G      ++T+++  L     F S L  + ++    M P   L 
Sbjct: 414 GQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLL 473

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+   + G   +A++++ +  + G    T T N L+ G    GK +E+ ++ Q    
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI-QKEIL 532

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            +    +  +YN L+   C K  ++EA+  + +MV  G++PD  TY+ L        +  
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A Q   + + N + P+  T  +++ G CK    E+   F   M    V PN VV+N LI
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           + +     S  +  AL L E+    G+ P+  T+++++   S    + + + +F++M   
Sbjct: 653 RAYCR---SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME 709

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+EP++  ++ L  GY + G+  K E +L  M    VHPN + +T +I G+     +  A
Sbjct: 710 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGY 390
             +  +M E GI P+  TY+  ++GY
Sbjct: 770 SRLLNEMREKGIVPDSITYKEFIYGY 795



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 126/246 (51%), Gaps = 1/246 (0%)

Query: 6   GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
           GK K  EA    + +++ G +P   TY+ L+  L    + +  +      +++GM PD  
Sbjct: 552 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 611

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            ++ MI+ C ++   +E  + F +M     +P T  YN LI+ Y   G+   +L+L + M
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
            + K + PN  TY  L++     + +EEA  +  +M   G++P+   Y  L   Y + G+
Sbjct: 672 -KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
             + E +L EM +  V PN+ T  +++ GY ++GN+ +A R L  M+E  + P+ + +  
Sbjct: 731 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 790

Query: 246 LIKGFL 251
            I G+L
Sbjct: 791 FIYGYL 796



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/410 (23%), Positives = 174/410 (42%), Gaps = 45/410 (10%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  L  +G  P+  T   L+ +L R   F+        V K G+ PD  LF   INA  
Sbjct: 213 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFC 271

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G V+EA+K+F KM+++G  P   T+NT+I G G  G+ +E+    + M + + ++P  
Sbjct: 272 KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE-RGMEPTL 330

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY+ILV+       I +A+ V+ +M   G  P+ + YN L  ++ + G   +A ++   
Sbjct: 331 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI--- 387

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV----FNSLIKGFL 251
                                               K+L V   L +    +N+LIKG+ 
Sbjct: 388 ------------------------------------KDLMVSKGLSLTSSTYNTLIKGYC 411

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
               +D  ++ L  M   G   +  +F++++    S  +         +M+   + P   
Sbjct: 412 KNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG 471

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
           + + L  G  + G+  KA  +       G   +      ++ G C A K+  A  I +++
Sbjct: 472 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
              G   +  +Y TL+ G    K+   A   L  M ++G++P   T  ++
Sbjct: 532 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 145/321 (45%), Gaps = 1/321 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK  +A  ++   + +G      T   L+  L    +      +  ++   G   D
Sbjct: 480 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 539

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +I+ C     +DEA     +M   G KP   TY+ LI G  N+ K EE+++   
Sbjct: 540 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
              ++  + P+  TY++++   C     EE      +M++  +QP+ V YN L RAY + 
Sbjct: 600 DCKRN-GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 658

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A ++  +M++  + PN  T   ++ G      +E+A      M+   + PN+  +
Sbjct: 659 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 718

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            +LI G+  +     V+  L  M    V P+ +T++ ++  ++  G + +   + ++M +
Sbjct: 719 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 778

Query: 304 AGIEPDIHVFSILAKGYVRAG 324
            GI PD   +     GY++ G
Sbjct: 779 KGIVPDSITYKEFIYGYLKQG 799



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 141/315 (44%), Gaps = 7/315 (2%)

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIE---EAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           +K + P+  T NIL+ +    N  +   EA++VV K    G+ PD   + T   A+ + G
Sbjct: 219 NKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK----GVSPDVYLFTTAINAFCKGG 274

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +   A ++  +M+   V PN  T   ++ G    G  ++A  F  +M E  + P L+ ++
Sbjct: 275 KVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYS 334

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            L+KG    K        L  M + G  P+V+ ++ ++D++  AG + K  EI D MV  
Sbjct: 335 ILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK 394

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+      ++ L KGY + G+   AE +L  M   G + N   FT+VI   C+ +    A
Sbjct: 395 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 454

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           +    +M    ++P      TL+ G  +  +  +A EL      KG      T   +   
Sbjct: 455 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 514

Query: 425 WRAIGLAREAKRVLK 439
               G   EA R+ K
Sbjct: 515 LCEAGKLDEAFRIQK 529



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 103/203 (50%), Gaps = 1/203 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P + TY+ ++    + +R +       ++    ++P+++++N +I A   SG +  A
Sbjct: 605 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 664

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +++ + MK  G  P ++TY +LIKG   + + EE+  L + M  +  ++PN   Y  L+ 
Sbjct: 665 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALID 723

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +     + +   ++ +M +  + P+ +TY  +   YA+ G    A ++L EM+   + P
Sbjct: 724 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783

Query: 204 NERTCGIIVSGYCKEGNMEDAMR 226
           +  T    + GY K+G + +A +
Sbjct: 784 DSITYKEFIYGYLKQGGVLEAFK 806


>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
 gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
          Length = 886

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 226/433 (52%), Gaps = 42/433 (9%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           I Y+ ++ A  +         L+ ++E+DG+     ++++M++  +   +  + + +F++
Sbjct: 357 IIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFER 416

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           +K+ G KPT  +Y  LI  Y  VGK  +++ + + M +   +K N++TY++L+  +   +
Sbjct: 417 LKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEM-ESHGIKHNNKTYSMLINGFIHLH 475

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
               A+++   M+ SG+QPD   YN L  A+ + G   RA ++   MQ  +++P+ RT  
Sbjct: 476 DFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFR 535

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            I+ G+   G+M+ A   L  M+     P ++ +N+LI G +       V+KA++++++ 
Sbjct: 536 PIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLV---RKHQVEKAVSVLDKM 592

Query: 270 ---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH--------------- 311
              G+ P+  T++ IM  ++++G +GK  E F  + ++G++ D++               
Sbjct: 593 SIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRM 652

Query: 312 --------------------VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
                               +++IL  G+ R G+  +A  +L  M++ G+ PN+  FT+ 
Sbjct: 653 QSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSY 712

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I+  C A  MQRA ++ ++M ++G+ PN+KT+ TL+ G+     P RA +  + M+  G+
Sbjct: 713 INACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGL 772

Query: 412 RPKKSTIQLVADS 424
           +P ++    +  S
Sbjct: 773 KPDEAAYHCLVTS 785



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 176/353 (49%), Gaps = 1/353 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+ V  GK  +A  I   +   G +    TY+ L+        F +  S+   + K G+
Sbjct: 433 INLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGL 492

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD  ++N ++ A  + GN+D A++IF++M+    +P+  T+  +I+G+   G  + +  
Sbjct: 493 QPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFD 552

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L LM +     P   TYN L+     K+ +E+A +V+ KM  +GI P+  TY  + R Y
Sbjct: 553 TLDLMRR-SGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGY 611

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A  G+  +A +   +++ + ++ +      ++   CK G M+ A+     M   ++  N 
Sbjct: 612 AASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNT 671

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            ++N LI G+    D       L  M+E G+ P++ TF++ ++A   AG M + + +  +
Sbjct: 672 FIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQE 731

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
           M   G++P++  F+ L KG+ R   P +A      M+  G+ P+   +  +++
Sbjct: 732 MADVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPDEAAYHCLVT 784



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 174/354 (49%), Gaps = 1/354 (0%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G++P++ +F ++++A + +G++  A+   ++MK  G + T  TY+ LI GYG     + +
Sbjct: 281 GIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSA 340

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
             L +  ++ K    N   Y+ ++ A C   +++ A  +V +M   GI      Y+++  
Sbjct: 341 DNLFK-EAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMH 399

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            Y    +  +   +   ++    +P   + G +++ Y K G +  A+     M+   +  
Sbjct: 400 GYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKH 459

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           N   ++ LI GF+ + D          M + G++PD   ++ +++A+   G M +   IF
Sbjct: 460 NNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIF 519

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           + M K  ++P    F  + +G+  AG+ ++A   L  MR+ G  P V+ +  +I G    
Sbjct: 520 ERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRK 579

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
            ++++A+S+ +KM   GI PN  TY  ++ GY  +    +A E    ++E G++
Sbjct: 580 HQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLK 633



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 157/344 (45%), Gaps = 46/344 (13%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  IF  +I+ G +P    Y  LV A  +       + +  +++K+ M+P +  F  +I 
Sbjct: 480 AFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIE 539

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
             + +G++  A      M+ SGC PT  TYN LI G     + E+++ +L  MS    + 
Sbjct: 540 GFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSI-AGIA 598

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA------------- 179
           PN+ TY I++R + +   I +A+    K+  SG++ D   Y TL RA             
Sbjct: 599 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 658

Query: 180 ----------------------YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
                                 +A+ G+ + A  +L +M+ + + PN  T    ++  CK
Sbjct: 659 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCK 718

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD--- 274
            G+M+ A   +  M ++ + PN+  F +LIKG+  +   D   K    M+  G+KPD   
Sbjct: 719 AGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPDEAA 778

Query: 275 -------VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                  +++ +T+M+  +  G+   C+E+F++ +   +   +H
Sbjct: 779 YHCLVTSLLSRATVMEGSTYTGIFSVCREMFENDLTVDLRTAVH 822



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 149/318 (46%), Gaps = 1/318 (0%)

Query: 96  KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
           KP+   +  ++  Y   G    +    + M + + ++PN   +  LV A+     +  A 
Sbjct: 248 KPSRREFGLMVVYYAKRGDKHHARATFENM-RARGIEPNAFVFTSLVHAYAVAGDMRGAL 306

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
           + V +M + GI+   VTY+ L   Y +  +   A+ +  E +      N      I+  +
Sbjct: 307 SCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAH 366

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C+ GNM+ A   +  M+E  +   + V++S++ G+  ++D          ++E G KP +
Sbjct: 367 CQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTI 426

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           +++  +++ +   G + K   I  +M   GI+ +   +S+L  G++   +   A SI   
Sbjct: 427 ISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFED 486

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M K G+ P+  ++  ++  +C    M RA+ I+E+M +  + P+ +T+  ++ G+  A  
Sbjct: 487 MIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGD 546

Query: 396 PWRAEELLQVMEEKGVRP 413
             RA + L +M   G  P
Sbjct: 547 MKRAFDTLDLMRRSGCAP 564



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 6/174 (3%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NIL+     +G   EA  +   + E+G  P + T+T+ + A  +    +   ++I ++  
Sbjct: 675 NILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMAD 734

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+KP+   F  +I   +     D A+K F++MK +G KP  + Y+ L+    +     E
Sbjct: 735 VGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLSRATVME 794

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSK--NSIEEAWNVVYKMVASGIQPD 169
                 + S  + +  ND T ++      SK  + IE     + + +     PD
Sbjct: 795 GSTYTGIFSVCREMFENDLTVDLRTAVHWSKWLHKIERTGGALTEALQRIFPPD 848


>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
          Length = 905

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 227/443 (51%), Gaps = 42/443 (9%)

Query: 23  EGHRPTLITYTTLVAALTR------QKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           EG   T++TY+ L++   +          +    L+ ++E+DG+     ++++M++  + 
Sbjct: 361 EGLELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTI 420

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
             N ++ + +F+++K+ G KP+  +Y  L+  Y  +GK  ++L + + M +   +K N++
Sbjct: 421 IQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEM-ESCGIKHNNK 479

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           TY++L+  +   +    A+ +  +M+ SG+QPD   YN L  A+ + G   RA  +L +M
Sbjct: 480 TYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKM 539

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
           Q  +++P+ R    I+ GY   G+M+ A+  L  M+     P ++ +N+LI G +     
Sbjct: 540 QKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKV 599

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH----- 311
                 L  M   G+ P+  T++ IM  ++++G +GK  E F  + ++G++ D++     
Sbjct: 600 QRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETL 659

Query: 312 ------------------------------VFSILAKGYVRAGEPQKAESILTSMRKYGV 341
                                         +++IL  G+ R G+  +AE ++  M++ GV
Sbjct: 660 LRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGV 719

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
            PN+  +T+ I+  C A  MQRA  + E+M ++G+ PN+KTY TL+ G+     P RA +
Sbjct: 720 PPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALK 779

Query: 402 LLQVMEEKGVRPKKSTIQLVADS 424
             + M+  G++P +++   +  S
Sbjct: 780 CFEEMKLAGLKPDEASYHCLVTS 802



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 192/388 (49%), Gaps = 7/388 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+ V  GK  +A  I   +   G +    TY+ L+        F +  ++  ++ + G+
Sbjct: 450 LNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGL 509

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD  ++N +I A  + GN+D A+ I +KM+    +P+   +  +I+GY   G  + +L 
Sbjct: 510 QPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALD 569

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L LM +   V P   TYN L+     K+ ++ A +V+ KM  +GI P+  TY  + R Y
Sbjct: 570 TLDLMRRSGCV-PTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGY 628

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A  G+  +A +   +++ + ++ +      ++   CK G M+ A+     M   ++  N 
Sbjct: 629 AASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNT 688

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            ++N LI G+    D    +  +  M+E GV P++ T+++ ++A   AG M + +++ ++
Sbjct: 689 FIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEE 748

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV  G++P++  ++ L KG+ R   P +A      M+  G+ P+   +  +++   +   
Sbjct: 749 MVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRAT 808

Query: 361 MQRA------MSIYEKMCEIGINPNLKT 382
           +         +S+  +M E  +  +L+T
Sbjct: 809 VMEGSTYTGIISVCREMSENDLTVDLRT 836



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 158/344 (45%), Gaps = 46/344 (13%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  IF  ++  G +P    Y  L+ A  +       + ++ K++K+ M+P +  F  +I 
Sbjct: 497 AFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIE 556

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
             + +G++  A+     M+ SGC PT  TYN LI G     K + ++ +L  MS    + 
Sbjct: 557 GYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSI-AGIT 615

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA------------- 179
           PN+ TY I++R + +   I +A+    K+  SG++ D   Y TL RA             
Sbjct: 616 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 675

Query: 180 ----------------------YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
                                 +A+ G+ + AE ++ +M+ + V PN  T    ++  CK
Sbjct: 676 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCK 735

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
            G+M+ A + +  M ++ + PN+  + +LIKG+  +   D   K    M+  G+KPD  +
Sbjct: 736 AGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEAS 795

Query: 278 F----------STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
           +          +T+M+  +  G++  C+E+ ++ +   +   +H
Sbjct: 796 YHCLVTSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAVH 839



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 122/255 (47%), Gaps = 6/255 (2%)

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+ R  G+++  Y K G+   A      M+   + PN  VF SL+  +   +D  G    
Sbjct: 295 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 354

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWS------SAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           +  M+  G++  +VT+S ++  ++       +G M + +E+  +M + GI+  I V+  +
Sbjct: 355 VEEMKSEGLELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSM 414

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             GY       K   +   +++ G  P+++ +  +++ +    K+ +A+SI ++M   GI
Sbjct: 415 MHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGI 474

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
             N KTY  L+ G+        A  + + M   G++P ++   L+ +++  +G    A  
Sbjct: 475 KHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAIC 534

Query: 437 VLKSAEEDRQSMPNK 451
           +L+  +++R    N+
Sbjct: 535 ILEKMQKERMQPSNR 549



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/224 (20%), Positives = 103/224 (45%), Gaps = 9/224 (4%)

Query: 211 IVSGY---CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
           +VS Y   CK+      + + +  K+L   P+   F  +I  +    D          M 
Sbjct: 265 VVSAYFPLCKQSLDVLDLTYPFLFKKLLHEPSRREFGLMIVYYAKRGDKHHARATFENMR 324

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR----- 322
             G++P+   F++++ A++ A  M       ++M   G+E  I  +SIL  G+ +     
Sbjct: 325 ARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSH 384

Query: 323 -AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
            +G  ++AE ++  M + G+   + ++ +++ G+       + + ++E++ E G  P++ 
Sbjct: 385 QSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSII 444

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           +Y  LL  Y +  +  +A  + + ME  G++    T  ++ + +
Sbjct: 445 SYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGF 488


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 206/432 (47%), Gaps = 8/432 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ GH+P   T+TTL+  L  + +    L L  K+  +G +P+ + +  +IN   +   
Sbjct: 106 ILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQ 165

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V EA  IF +M   G  P   TYN+LI G   + + +    L+  M  D  + P+  T N
Sbjct: 166 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV-DSKIMPDVFTLN 224

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            +V A C +  + EA +VV  M+  G++P+ VTYN L   +    E   A ++   M + 
Sbjct: 225 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 284

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
               N  +   +++GYCK  +++ AM     M   E+ PN V +N+LI G   +     +
Sbjct: 285 DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGR---L 341

Query: 260 DKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
             A++L  E    G  PD+VT+ T+ D       + K   +   +  +  +PDI +++ +
Sbjct: 342 QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTI 401

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G  RAGE + A  + +++   G+ PNV  +  +I G C    +  A  ++ +M + G 
Sbjct: 402 LDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGC 461

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
           +PN  TY  +  G+    +  R  ELL+ M  +G     ST  L+       GL +  K+
Sbjct: 462 SPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQ 521

Query: 437 VL-KSAEEDRQS 447
           +L K +   R S
Sbjct: 522 ILCKPSSSSRPS 533



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 212/467 (45%), Gaps = 39/467 (8%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA   FN ++ +   P+ + +  L+ ++ + K   ++LSL  +++  G+ PD      +I
Sbjct: 28  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 87

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N+      VD A     K+   G +P  +T+ TLI+G    GK  E+L L   M  +   
Sbjct: 88  NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE-GF 146

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +PN  TY  L+   C    + EA+N+  +M+  GI P+ VTYN+L     +  E      
Sbjct: 147 QPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTT 206

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF- 250
           ++ EM ++++ P+  T   +V   CKEG + +A   +  M    V PN+V +N+L+ G  
Sbjct: 207 LMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHC 266

Query: 251 ----LDI----------KDS-----------------DGVDKALTLMEEFG---VKPDVV 276
               +D+          KD                    VDKA+ L EE     + P+ V
Sbjct: 267 LRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTV 326

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T++T++      G +     +F +MV  G  PD+  +  L+    +     KA ++L ++
Sbjct: 327 TYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI 386

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
                 P++ ++TT++ G C A +++ A  ++  +   G+ PN+ TY  ++ G  +    
Sbjct: 387 EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLL 446

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             A +L   M + G  P   T  L+    R      EA R ++  EE
Sbjct: 447 AEASKLFSEMNKNGCSPNDCTYNLIT---RGFLRNNEALRTIELLEE 490



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 176/365 (48%), Gaps = 5/365 (1%)

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN--VKPNDRT 137
           +DEA+  F +M      P+T  +N L+    ++ K +    LL L  Q  +  + P+  T
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLT---SIAKTKHHSTLLSLSRQMDSFGIPPDVYT 82

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
             I++ + C  N ++ A++ + K++  G QPDA T+ TL R     G+   A  +  +M 
Sbjct: 83  LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 142

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
               +PN  T G +++G CK+  + +A      M    + PN+V +NSLI G   + +  
Sbjct: 143 GEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWK 202

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
            V   +  M +  + PDV T +T++DA    G++ +  ++ D M+  G+EP++  ++ L 
Sbjct: 203 HVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 262

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            G+    E   A  +  +M       NV+ + T+I+G+C    + +AM ++E+M    + 
Sbjct: 263 DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELT 322

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           PN  TY TL+ G     +   A  L   M  +G  P   T + ++D         +A  +
Sbjct: 323 PNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMAL 382

Query: 438 LKSAE 442
           LK+ E
Sbjct: 383 LKAIE 387



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 184/386 (47%), Gaps = 2/386 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA ++F+ +I EG +P ++TY TL+  L + ++     ++ S++   G+ P+
Sbjct: 125 LCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPN 184

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N++I+   +         +  +M DS   P   T NT++      G   E+  ++ 
Sbjct: 185 IVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVD 244

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           +M   + V+PN  TYN L+   C +N ++ A  V   MV      + ++YNTL   Y + 
Sbjct: 245 MMIH-RGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKI 303

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
               +A  +  EM   ++ PN  T   ++ G C  G ++DA+   + M      P+LV +
Sbjct: 304 QSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTY 363

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            +L       +  D     L  +E     PD+  ++TI+D    AG +   +++F ++  
Sbjct: 364 RTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSS 423

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G++P++  ++I+  G  + G   +A  + + M K G  PN   +  +  G+    +  R
Sbjct: 424 KGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALR 483

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWG 389
            + + E+M   G + ++ T  TLL G
Sbjct: 484 TIELLEEMLARGFSVDVST-TTLLVG 508



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/398 (23%), Positives = 192/398 (48%), Gaps = 20/398 (5%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           FN ++     P+ + +T L+ ++ + K + ++LSL ++++  G+ PD    N +IN+   
Sbjct: 569 FNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCH 628

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
              +  A  +  K+   G +P   TY TL+ G            L ++++  K + P+  
Sbjct: 629 LRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNG------------LCKMIT--KGISPDIF 674

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           TYN L+ A C+    +    ++ +MV S I P+ V ++T+  A  + G    A  ++  M
Sbjct: 675 TYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM 734

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
               V P+  T   ++ G+C    M++A++    M      PN+  +N LI G+  I+  
Sbjct: 735 IKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQR- 793

Query: 257 DGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
             +DKA+ L+E+    G+  D VT++T++      G +     +F +MV +G  PD+  +
Sbjct: 794 --MDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTY 851

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
            IL     +     +A  +L ++    +  +++++   I G C A +++ A  ++  +  
Sbjct: 852 RILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSS 911

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
            G+ P+++TY  ++ G  +      A +L + M+E  +
Sbjct: 912 KGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDI 949



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 102/436 (23%), Positives = 188/436 (43%), Gaps = 55/436 (12%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLV-AALTRQKRFKSILSLISKVEKDGMKP 62
           L  +G   EAH + + +I  G  P ++TY  L+     R +   ++    + V KD +  
Sbjct: 230 LCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA- 288

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           + I +N +IN   +  +VD+AM +F++M      P T TYNTLI G  +VG+ ++++ L 
Sbjct: 289 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 348

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             M     + P+  TY  L    C    +++A  ++  +  S   PD   Y T+     +
Sbjct: 349 HEMVARGQI-PDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCR 407

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            GE   A  +   + +  ++PN  T  I++ G CK+G + +A +    M +    PN   
Sbjct: 408 AGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCT 467

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI-- 297
           +N + +GFL  ++++ + + + L+EE    G   DV T + ++   S  GL    ++I  
Sbjct: 468 YNLITRGFL--RNNEAL-RTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILC 524

Query: 298 --------------------------------------------FDDMVKAGIEPDIHVF 313
                                                       F+ M+     P    F
Sbjct: 525 KPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDF 584

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           + L     +        S+ T M  +G+ P+V     +I+ +C+  ++  A S+  K+ +
Sbjct: 585 TKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLK 644

Query: 374 IGINPNLKTYETLLWG 389
           +G  P++ TY TL+ G
Sbjct: 645 LGFQPDVVTYGTLMNG 660



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/387 (21%), Positives = 162/387 (41%), Gaps = 22/387 (5%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL-- 119
           P ++ F  ++ + ++  +    + +  +M   G  P   T N LI  + ++ +   +   
Sbjct: 579 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 638

Query: 120 --KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
             KLL+L       +P+  TY  L+   C             KM+  GI PD  TYN+L 
Sbjct: 639 LAKLLKL-----GFQPDVVTYGTLMNGLC-------------KMITKGISPDIFTYNSLI 680

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
            A     E      +L EM N+++ PN      +V   CKEG +  A   +  M +  V 
Sbjct: 681 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 740

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P++V + +L+ G     + D   K    M   G  P+V +++ +++ +     M K   +
Sbjct: 741 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 800

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            + M   G+  D   ++ L  G    G  Q A ++   M   G  P++V +  ++   C 
Sbjct: 801 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK 860

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              +  AM + + +    ++ ++  Y   + G   A +   A +L   +  KG++P   T
Sbjct: 861 NHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRT 920

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEED 444
             ++       GL  EA ++ +  +E+
Sbjct: 921 YNIMIHGLCKRGLLDEANKLFRKMDEN 947



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 121/253 (47%), Gaps = 1/253 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           + N ++     P ++ ++T+V AL ++        ++  + K G++PD + + A+++   
Sbjct: 695 LLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHC 754

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
               +DEA+K+F  M   GC P   +YN LI GY  + + ++++ LL+ MS  + +  + 
Sbjct: 755 LRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSL-QGLIADT 813

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TYN L+   C    ++ A  + ++MVASG  PD VTY  L     +      A  +L  
Sbjct: 814 VTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKA 873

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           ++ + +  +     I + G C+ G +E A      +    + P++  +N +I G      
Sbjct: 874 IEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGL 933

Query: 256 SDGVDKALTLMEE 268
            D  +K    M+E
Sbjct: 934 LDEANKLFRKMDE 946



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 109/227 (48%), Gaps = 1/227 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           AH + + +I+ G  P ++TYT L+     +      + +   +   G  P+   +N +IN
Sbjct: 727 AHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILIN 786

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              +   +D+AM + ++M   G    T TYNTLI G  +VG+ + ++ L   M     + 
Sbjct: 787 GYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQI- 845

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+  TY IL+   C  + + EA  ++  +  S +  D + YN       + GE   A  +
Sbjct: 846 PDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDL 905

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
              + +  ++P+ RT  I++ G CK G +++A +   +M E ++  N
Sbjct: 906 FSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSN 952



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/275 (21%), Positives = 116/275 (42%), Gaps = 35/275 (12%)

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
           N+++EA +   +M+     P  V +N L  + A+         +  +M +  + P+  T 
Sbjct: 24  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 83

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
            I+++  C                    H N V F      F           AL  + +
Sbjct: 84  AIVINSLC--------------------HLNRVDF-----AF----------SALAKILK 108

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G +PD  TF+T++      G +G+   +FD M+  G +P++  +  L  G  +  +  +
Sbjct: 109 LGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTE 168

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A +I + M   G+ PN+V + ++I G C   + +   ++  +M +  I P++ T  T++ 
Sbjct: 169 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 228

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
              +      A +++ +M  +GV P   T   + D
Sbjct: 229 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMD 263


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 209/432 (48%), Gaps = 2/432 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK   A   F+ +  +G  P  +TYTTL+  L + +R    + L  +++ +   P    +
Sbjct: 287 GKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAY 346

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N MI     +G  DEA  + ++ K  GC P+   YN ++   G  GK EE+L++   M Q
Sbjct: 347 NTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ 406

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D    PN  TYNIL+   C    +E A  V   M  +G+ P+ +T N +     +  +  
Sbjct: 407 D--AAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLD 464

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +   + +    P+ RT   ++ G  + G ++DA     +M + +  PN+VV+ SLI
Sbjct: 465 EACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLI 524

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           + F      +   K    M   G  PD++  ++ MD    AG + K + +F+++   G+ 
Sbjct: 525 QNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLV 584

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+  +SIL  G V+AG  ++   +   M++ G+H +V+ + TVI G+C + K+ +A  +
Sbjct: 585 PDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQL 644

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
            E+M   G+ P + TY +++ G  +  +   A  L +  +  GV         + D +  
Sbjct: 645 LEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGK 704

Query: 428 IGLAREAKRVLK 439
           +G   EA  +L+
Sbjct: 705 VGRIDEAYLILE 716



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/487 (21%), Positives = 224/487 (45%), Gaps = 7/487 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L   G+   A  + + + E G  P ++T   ++  L + ++     S+   ++    
Sbjct: 419 IDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVC 478

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PDS  F ++I+     G VD+A  +++KM DS   P    Y +LI+ +   G+ E+  K
Sbjct: 479 SPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHK 538

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M   +   P+    N  +        +E+   +  ++ A G+ PD  +Y+ L    
Sbjct: 539 IYKEMVH-RGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGL 597

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G +    ++ +EM+   +  +      ++ G+CK G ++ A + L  MK   + P +
Sbjct: 598 VKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTV 657

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V + S++ G   I   D +D+A  L EE    GV  +VV +S+++D +   G + +   I
Sbjct: 658 VTYGSVVDGLAKI---DRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLI 714

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            +++++ G+ P+ + ++ L    V+A E  +A+    +M+     PN + ++ +I+G C 
Sbjct: 715 LEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCM 774

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             K  +A   +++M + G+ PN  TY T++ G  +A     A  L    +  G  P  + 
Sbjct: 775 IRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSAC 834

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIP 477
              + +   +   A +A  V +        + +K   + ++++H+   L  +      + 
Sbjct: 835 YNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAAIVGAVLR 894

Query: 478 GVVSSEH 484
            +  S+H
Sbjct: 895 EMAKSQH 901



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/440 (22%), Positives = 194/440 (44%), Gaps = 2/440 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            V   K  EA  +   + +   RP    YTTL+ AL+   R   +L+L  ++++ G + +
Sbjct: 178 FVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEAN 237

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             LF  ++   +  G +D A+ +  +MK +        YN  I  +G VGK + + K   
Sbjct: 238 VHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFH 297

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + + + P+D TY  L+   C    ++EA  +  ++  +   P    YNT+   Y   
Sbjct: 298 EM-KAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSA 356

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A  +L   +     P+      I++   ++G +E+A+R    M++ +  PNL  +
Sbjct: 357 GKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ-DAAPNLTTY 415

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N LI       + +   K    M+E G+ P+++T + ++D    A  + +   IF  +  
Sbjct: 416 NILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDH 475

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
               PD   F  L  G  R G    A S+   M      PNVV++T++I  +    + + 
Sbjct: 476 KVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKED 535

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
              IY++M   G +P+L    + +    +A +  +   L + ++ +G+ P   +  ++  
Sbjct: 536 GHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIH 595

Query: 424 SWRAIGLAREAKRVLKSAEE 443
                G +RE  ++    +E
Sbjct: 596 GLVKAGFSRETYKLFYEMKE 615



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/373 (21%), Positives = 170/373 (45%), Gaps = 10/373 (2%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           ++ H P +  Y   +  + R +    +  ++ ++   G    + +   ++ +  +S  + 
Sbjct: 128 QQAHCPEV--YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLK 185

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           EA  + + M+    +P  S Y TLI       +P+  L L   M Q+   + N   +  L
Sbjct: 186 EAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQM-QEIGYEANVHLFTTL 244

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           VR +  +  I+ A +++ +M ++    D V YN     + + G+   A +   EM+   +
Sbjct: 245 VRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGL 304

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            P++ T   ++   CK   +++A+     +      P +  +N++I G+     +   D+
Sbjct: 305 VPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGY---GSAGKFDE 361

Query: 262 ALTLME---EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
           A +L+E     G  P V+ ++ I+      G + +   I D+M +    P++  ++IL  
Sbjct: 362 AYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM-RQDAAPNLTTYNILID 420

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
              +AGE + A  +  +M++ G+ PN++    +I   C A K+  A SI+  +     +P
Sbjct: 421 MLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSP 480

Query: 379 NLKTYETLLWGYG 391
           + +T+ +L+ G G
Sbjct: 481 DSRTFCSLIDGLG 493



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/358 (20%), Positives = 159/358 (44%), Gaps = 37/358 (10%)

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
           ++NA +   + + N+D   +I ++M  +G   +      L+  +    K +E+  ++++M
Sbjct: 135 VYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMM 194

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
            + K  +P    Y  L+ A  + N  +    + ++M   G + +   + TL R +A    
Sbjct: 195 RKFK-FRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFA---- 249

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
                                          +EG ++ A+  L  MK      +LV++N 
Sbjct: 250 -------------------------------REGRIDAALSLLDEMKSNSFTADLVLYNV 278

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
            I  F  +   D   K    M+  G+ PD VT++T++     A  + +  E+F+++    
Sbjct: 279 CIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNR 338

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
             P ++ ++ +  GY  AG+  +A S+L   ++ G  P+V+ +  +++      K++ A+
Sbjct: 339 SVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEAL 398

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
            I+++M +    PNL TY  L+    +A +   A ++   M+E G+ P   T+ ++ D
Sbjct: 399 RIHDEMRQ-DAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMID 455



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 123/285 (43%), Gaps = 14/285 (4%)

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
            YN      A+       EQ+L EM       +      +V+ + K   +++A   +  M
Sbjct: 135 VYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMM 194

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSA 288
           ++ +  P    + +LI     +  ++  D  LTL   M+E G + +V  F+T++  ++  
Sbjct: 195 RKFKFRPAFSAYTTLIGA---LSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFARE 251

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
           G +     + D+M       D+ ++++    + + G+   A      M+  G+ P+ V +
Sbjct: 252 GRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTY 311

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGIN---PNLKTYETLLWGYGEAKQPWRAEELLQV 405
           TT+I   C A ++  A+ ++E   E+ +N   P +  Y T++ GYG A +   A  LL+ 
Sbjct: 312 TTLIGVLCKARRLDEAVELFE---ELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLER 368

Query: 406 MEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            + KG  P       +       G   EA R+     +D  + PN
Sbjct: 369 QKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQD--AAPN 411


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 217/434 (50%), Gaps = 15/434 (3%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD----GMKPDSILFNAMINACSESGN 79
           G  P +++Y  ++ ++ R ++    +    KV ++    G+  +   +N +I     +GN
Sbjct: 162 GFMPGVLSYNAILDSIVRCRK---PVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGN 218

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           ++  ++ F++M+ + C P   TYNT+I  Y  + + +E+ KLL+ M  +  ++PN  TYN
Sbjct: 219 LEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLE-GLEPNLLTYN 277

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           +++   C    IEE   V+ +M   G  PD VTYNTL   Y + G  ++A  +  EM  N
Sbjct: 278 MVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRN 337

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            + P+  T   +++  CK GN+  AM F  +M    + PN V + SLI GF        +
Sbjct: 338 GLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGF---SQKGFM 394

Query: 260 DKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           D+A  + +E    G  P +VT++ +++    +G M +   +   M   G+ PD+  +S +
Sbjct: 395 DEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTI 454

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G+ R  E  +A  +   M + GV P+ + ++++I G C   ++  A  ++++M    +
Sbjct: 455 IAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSL 514

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            P+  TY +L+ GY +      A  L   M +KG  P   T  ++ +        REAKR
Sbjct: 515 LPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKR 574

Query: 437 VLKSAEEDRQSMPN 450
           +L     D +S+PN
Sbjct: 575 LLLKLFYD-ESIPN 587



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 197/407 (48%), Gaps = 37/407 (9%)

Query: 64  SILFNAMINACSESGNVDEAM------------------------------------KIF 87
           S +F+ ++ +CS    +++A+                                    K++
Sbjct: 132 SAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVY 191

Query: 88  QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
           ++M  SG      +YN LI+G+   G  E  L+  + M +++ + PN  TYN ++ A+C 
Sbjct: 192 REMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCL-PNVVTYNTVIGAYCK 250

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
              I+EA+ ++  M   G++P+ +TYN +     + G       +L EM      P+  T
Sbjct: 251 LKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVT 310

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
              +V+GYCK GN   A+     M    + P++V + SLI       + +   +    M 
Sbjct: 311 YNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMH 370

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
             G++P+ VT++++++ +S  G M +   I+D+M+++G  P I  ++ L  G+  +G  +
Sbjct: 371 VRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRME 430

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           +A  +L  M   G+ P+VV ++T+I+G+C   ++ RA  +  +M E G++P+  TY +L+
Sbjct: 431 EAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLI 490

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
            G  E ++   A +L Q M  K + P + T   + + +   G   EA
Sbjct: 491 QGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEA 537



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/454 (25%), Positives = 210/454 (46%), Gaps = 17/454 (3%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  ++  +I  G    + +Y  L+         +  L    ++E++   P+ + +N +I 
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIG 246

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
           A  +   +DEA K+ + M   G +P   TYN +I G   VG+ EE+  +L  M + K   
Sbjct: 247 AYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDR-KGFA 305

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+  TYN LV  +C   +  +A  +  +M+ +G+ PD VTY +L     + G   RA + 
Sbjct: 306 PDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEF 365

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             +M    +RPN  T   +++G+ ++G M++A R    M      P +V +N+L+ G   
Sbjct: 366 FDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCV 425

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
               +     L  ME  G+ PDVV++STI+  +     + +  ++  +MV+ G+ PD   
Sbjct: 426 SGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAIT 485

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           +S L +G        +A  +   M    + P+   +T++I+G+C    +  A++++++M 
Sbjct: 486 YSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMI 545

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI---- 428
           + G  P+  TY  L+ G  +  +   A+ LL  +      P   T   + +S   I    
Sbjct: 546 KKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKS 605

Query: 429 -----------GLAREAKRVLKSAEEDRQSMPNK 451
                      GL  EA +V +S  + R   PN+
Sbjct: 606 VVALIKGFCMKGLMNEADQVFESMIK-RNQKPNE 638



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 183/360 (50%), Gaps = 16/360 (4%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G  H+A  + + ++  G  P ++TYT+L+  + +       +    ++   G++P+ + +
Sbjct: 322 GNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTY 381

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            ++IN  S+ G +DEA +I+ +M  SG  PT  TYN L+ G+   G+ EE++ LL+ M +
Sbjct: 382 TSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGM-E 440

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K + P+  +Y+ ++  +C    ++ A+ +  +MV  G+ PDA+TY++L +   +     
Sbjct: 441 GKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLN 500

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +  EM N  + P+E T   +++GYCKEG++ +A+     M +    P+ V +N LI
Sbjct: 501 EACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLI 560

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS---------------AGLMG 292
            G      +    + L  +      P+ +T+ T++++ S                 GLM 
Sbjct: 561 NGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMN 620

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           +  ++F+ M+K   +P+  V++++  G+ R G   KA  +   M  +G  P+ V    ++
Sbjct: 621 EADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALV 680



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/475 (22%), Positives = 218/475 (45%), Gaps = 22/475 (4%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +   +  EG  P L+TY  ++  L R  R +    +++++++ G  PD + +N ++
Sbjct: 256 EAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLV 315

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N   + GN  +A+ +  +M  +G  P   TY +LI      G    +++    M   + +
Sbjct: 316 NGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQM-HVRGL 374

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +PN  TY  L+  +  K  ++EA+ +  +M+ SG  P  VTYN L   +   G    A  
Sbjct: 375 RPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIG 434

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L  M+   + P+  +   I++G+C+   ++ A +    M E  V P+ + ++SLI+G  
Sbjct: 435 LLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLC 494

Query: 252 DIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           + +    +++A  L +E     + PD  T++++++ +   G + +   + D+M+K G  P
Sbjct: 495 EQRR---LNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLP 551

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS--------------- 353
           D   +++L  G  +    ++A+ +L  +      PN + + T+I                
Sbjct: 552 DTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIK 611

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G+C    M  A  ++E M +    PN   Y  ++ G+       +A +L + M + G  P
Sbjct: 612 GFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIP 671

Query: 414 KKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSA 468
              TI  +  +  + G+  +   V++      +    +  +  V+  H++ N+ A
Sbjct: 672 HTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDA 726



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 192/400 (48%), Gaps = 22/400 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  E   +   +  +G  P  +TY TLV    +   F   L L S++ ++G+
Sbjct: 280 INGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGL 339

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + + ++IN   ++GN++ AM+ F +M   G +P   TY +LI G+   G  +E+ +
Sbjct: 340 PPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYR 399

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M +     P   TYN L+   C    +EEA  ++  M   G+ PD V+Y+T+   +
Sbjct: 400 IWDEMIR-SGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGF 458

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +Y E  RA QM  EM    V P+  T   ++ G C++  + +A      M    + P+ 
Sbjct: 459 CRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDE 518

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             + SLI G+   K+ D +++AL L +E    G  PD VT++ +++  +      + + +
Sbjct: 519 FTYTSLINGY--CKEGD-LNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRL 575

Query: 298 -----FDDMVKAGIE--------PDIHVFSILA--KGYVRAGEPQKAESILTSMRKYGVH 342
                +D+ +  GI          DI   S++A  KG+   G   +A+ +  SM K    
Sbjct: 576 LLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQK 635

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           PN  ++  +I G C    + +A  +Y++M + G  P+  T
Sbjct: 636 PNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVT 675



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 162/353 (45%), Gaps = 16/353 (4%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG   EA+ I++ +I  G  PT++TY  L+       R +  + L+  +E  G+ PD + 
Sbjct: 391 KGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVS 450

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +I        +D A ++  +M + G  P   TY++LI+G     +  E+  L Q M 
Sbjct: 451 YSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEM- 509

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +K++ P++ TY  L+  +C +  + EA N+  +M+  G  PD VTYN L     +   T
Sbjct: 510 LNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQART 569

Query: 187 YRAEQMLFEMQNNQVRPNERT-------CGII--------VSGYCKEGNMEDAMRFLYRM 231
             A+++L ++  ++  PN  T       C  I        + G+C +G M +A +    M
Sbjct: 570 REAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESM 629

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
            +    PN  V+N +I G     +     K    M +FG  P  VT   ++ A  S G+ 
Sbjct: 630 IKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMD 689

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
            +   +  D++++    D  +   L +   + G      ++LT M K G  P+
Sbjct: 690 EQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLPS 742


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 198/409 (48%), Gaps = 2/409 (0%)

Query: 6   GKG-KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           G+G K  +A  +FN        PT+  +T L+  L     F+    +  K+ + G + D 
Sbjct: 41  GRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDR 100

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
             +N +I     SG +D AM++F++MK  G +P   TY  L+   G  G+ +E+      
Sbjct: 101 FAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDA 160

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M + + + PN  TYN+L+ A+     ++ A  +  +M   G QP  VTYN L  A    G
Sbjct: 161 MLE-RGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAG 219

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
               A ++  +M  +   P+  T   +V+G  K G +E+A +    M +  V  +LV +N
Sbjct: 220 RVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYN 279

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           SL+       + D V K +  M   G  PD  +F+TIMDA   A      +E+F  MV++
Sbjct: 280 SLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVES 339

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G +PD+  ++IL   Y R G+  +A  +L  M + G  P    + ++I       ++  A
Sbjct: 340 GCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEA 399

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            ++ E+M   G  P++ TY  L+   G+  +  RA  L Q M++KGV P
Sbjct: 400 FAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEP 448



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 172/356 (48%), Gaps = 9/356 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EA   F+ ++E G  P + TY  L+ A  +  +    L L +++++ G 
Sbjct: 142 VNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGF 201

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P  + +N +++A   +G V  A K+F KM   GC P + TY+TL+ G G  G+ EE+ K
Sbjct: 202 QPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHK 261

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M  D+ V  +   YN L+       +++  W ++ +M   G  PDA ++NT+  A 
Sbjct: 262 VFREMV-DRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDAL 320

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +   A ++   M  +  +P+  +  I++  Y + G+   A + L  M E    P  
Sbjct: 321 GKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPET 380

Query: 241 VVFNSLIKGFLDIKDSDG-VDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
             +NSLI        +DG VD+A  ++EE    G +PDVVT++ +MD     G   +   
Sbjct: 381 KTYNSLIHWLA----TDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAAR 436

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           +F  M   G+EPD   +++   G        +A  +   M+  G   +  M+  +I
Sbjct: 437 LFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILI 492



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 174/374 (46%), Gaps = 1/374 (0%)

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK 129
           M+   +  G +D    + ++M   G     +T   LI  YG   K  ++  L    ++  
Sbjct: 1   MLVVLASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFN-QAESF 59

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
              P    +  L+    +    E A  V  K+V  G Q D   YN L R + + G+   A
Sbjct: 60  ACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSA 119

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
            +M  EM+     P+E T G +V+   K G +++A  F   M E  + PN+  +N L+  
Sbjct: 120 MEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDA 179

Query: 250 FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
           F  +   D        M+  G +P VVT++ ++DA  SAG +G  +++F  M   G  PD
Sbjct: 180 FRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPD 239

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
            + +S L  G  ++G  ++A  +   M   GV  ++V + ++++    A  M R   + +
Sbjct: 240 SYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMK 299

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           +M   G +P+  ++ T++   G+A +P  A E+   M E G +P   +  ++ DS+   G
Sbjct: 300 EMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFG 359

Query: 430 LAREAKRVLKSAEE 443
            A +A+++L+   E
Sbjct: 360 DAAQARQMLEEMVE 373



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 179/381 (46%), Gaps = 3/381 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+   A  +F  +  +G  P   TY  LV AL +  R +   S    + + G+ P+   +
Sbjct: 114 GQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTY 173

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +++A  + G +D A+ +F +MK  G +P+  TYN L+    + G+   + KL   M+ 
Sbjct: 174 NLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTG 233

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D    P+  TY+ LV        +EEA  V  +MV  G+  D V YN+L    A+ G   
Sbjct: 234 D-GCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMD 292

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY-RMKELEVHPNLVVFNSL 246
           R  +++ EM      P+  +   I+    K  N  DA R ++ RM E    P+L+ +N L
Sbjct: 293 RVWKLMKEMSRKGFHPDAFSFNTIMDALGK-ANKPDAAREVFARMVESGCKPDLISYNIL 351

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I  +    D+    + L  M E G  P+  T+++++   ++ G + +   + ++M  AG 
Sbjct: 352 IDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGC 411

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD+  ++ L     + GE Q+A  +   M+  GV P+ + +   I G     ++  A+ 
Sbjct: 412 RPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALV 471

Query: 367 IYEKMCEIGINPNLKTYETLL 387
           +++ M  +G   +   Y  L+
Sbjct: 472 LFKDMKAVGCPVDKAMYRILI 492



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/425 (23%), Positives = 181/425 (42%), Gaps = 40/425 (9%)

Query: 20  LIEEGH--RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSES 77
           ++ EG   RP   T   L+ A  R  +      L ++ E     P    F  +I+    S
Sbjct: 21  MVAEGRPLRPN--TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNS 78

Query: 78  GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT 137
           G  + A  +++K+   GC+     YN LI+ +G  G+ + ++++ + M + K  +P++ T
Sbjct: 79  GEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREM-KIKGSEPDEYT 137

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           Y  LV A      ++EA +    M+  G+ P+  TYN L  A+ + G+   A  +  EM+
Sbjct: 138 YGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMK 197

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
               +P+  T  I++   C  G +  A +  ++M                         D
Sbjct: 198 RRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMT-----------------------GD 234

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
           G              PD  T+ST+++    +G + +  ++F +MV  G+  D+  ++ L 
Sbjct: 235 GC------------SPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLL 282

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
               +AG   +   ++  M + G HP+   F T++     A K   A  ++ +M E G  
Sbjct: 283 ATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCK 342

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           P+L +Y  L+  Y       +A ++L+ M E G  P+  T   +       G   EA  V
Sbjct: 343 PDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAV 402

Query: 438 LKSAE 442
           L+  E
Sbjct: 403 LEEME 407



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 130/249 (52%), Gaps = 1/249 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EAH +F  +++ G    L+ Y +L+A L +      +  L+ ++ + G 
Sbjct: 247 VNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGF 306

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD+  FN +++A  ++   D A ++F +M +SGCKP   +YN LI  Y   G   ++ +
Sbjct: 307 HPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQ 366

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+ M +   + P  +TYN L+    +   ++EA+ V+ +M  +G +PD VTYN L    
Sbjct: 367 MLEEMVEAGFI-PETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDML 425

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + GE  RA ++  +M++  V P+  +  + + G   +  +++A+     MK +    + 
Sbjct: 426 GKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDK 485

Query: 241 VVFNSLIKG 249
            ++  LI+ 
Sbjct: 486 AMYRILIRA 494



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 1/197 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L    KP  A  +F  ++E G +P LI+Y  L+ +  R         ++ ++ + G 
Sbjct: 317 MDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGF 376

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P++  +N++I+  +  G VDEA  + ++M+ +GC+P   TYN L+   G  G+ + + +
Sbjct: 377 IPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAAR 436

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L Q M +DK V+P+  +Y + +      + ++EA  +   M A G   D   Y  L RA 
Sbjct: 437 LFQQM-KDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAA 495

Query: 181 AQYGETYRAEQMLFEMQ 197
            + G+T    Q+  E Q
Sbjct: 496 HRAGDTELEAQLKHESQ 512



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 85/178 (47%)

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           E F   P V  F+ ++D   ++G   + + ++  +V+ G + D   +++L + + R+G+ 
Sbjct: 57  ESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQL 116

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             A  +   M+  G  P+   +  +++    A ++Q A S ++ M E G+ PN+ TY  L
Sbjct: 117 DSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLL 176

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           +  + +  Q   A  L   M+ +G +P   T  ++ D+  + G    A+++      D
Sbjct: 177 MDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGD 234


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 218/466 (46%), Gaps = 36/466 (7%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV   +  +   +F+ ++E G RP    Y   + A  +    K  + L++ +++ G+ P 
Sbjct: 157 LVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPG 216

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             ++N +I    +   + +A K+F +M D    P   TYNTLI GY  VG+ EE+  + +
Sbjct: 217 VFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRE 276

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  + NV+P   T+N L+   C    +EEA  V+ +M   G  PD  TY TL   + + 
Sbjct: 277 RMKVE-NVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKC 335

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY-------------- 229
           G    +  +  E     V+  + TC I+++  CKEGNME A   L               
Sbjct: 336 GNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFF 395

Query: 230 ---------------------RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
                                +M+ + + PN V +NSL+K F ++K+ +  +K +  M E
Sbjct: 396 NTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVE 455

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            GV P+V T++T++D +  + L  +C +I ++M K G++P++  +  L     +     +
Sbjct: 456 KGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILE 515

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           AE IL  M   GV PN  ++  +I G C A K++ A   +++M    I P L TY  L+ 
Sbjct: 516 AEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILIN 575

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G  +  +   AE L   +  KG+     T   +   + + G  ++A
Sbjct: 576 GLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKA 621



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 223/420 (53%), Gaps = 5/420 (1%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N+++G    + +  +A  +F+ +++    P  ITY TL+    +  + +   ++  +++ 
Sbjct: 221 NVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKV 280

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
           + ++P  I FN+++N    +  ++EA ++ ++M+  G  P   TY TL  G+   G  + 
Sbjct: 281 ENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDA 340

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           S+ L +  +  K V+  D T +IL+ A C + ++E+A  V+ K + +G+ P  V +NT+ 
Sbjct: 341 SITLSE-EAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIV 399

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
             Y Q G+  +A   + +M+   +RPN  T   +V  +C+  NME+A + + +M E  V 
Sbjct: 400 NGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVL 459

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           PN+  +N+LI G+      D   + L  ME+ G+KP+V+++  +++       + + + I
Sbjct: 460 PNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVI 519

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
             DMV  G+ P+  ++++L  G   AG+ + A      M    + P +V +  +I+G C 
Sbjct: 520 LGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCK 579

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             K+  A ++  ++   G++ ++ TY +L+ GY  A    +A EL + M++ G++P  +T
Sbjct: 580 KGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNT 639



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 212/437 (48%), Gaps = 8/437 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G   +A  +    +E G  P  + + T+V    +        + I K+E  G+
Sbjct: 364 LNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGL 423

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ + +N+++    E  N++EA K  +KM + G  P   TYNTLI GYG     +   +
Sbjct: 424 RPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQ 483

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+ M + K +KPN  +Y  L+   C   +I EA  ++  MV  G+ P+A  YN L    
Sbjct: 484 ILEEM-EKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGS 542

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G+   A +   EM   ++ P   T  I+++G CK+G + +A      +    +  ++
Sbjct: 543 CIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDV 602

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           + +NSLI G+     +  V KAL L   M++ G+KP + T+  ++      GL+   ++I
Sbjct: 603 ITYNSLISGY---SSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLV-LVEKI 658

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           + +M++  + PD  +++ L   YV  G+ QKA S+ ++M   G+ P+ + +  +I G   
Sbjct: 659 YQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFK 718

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             +M +  ++   M   G+ P  +TY+ L+ G+ + K    A    + M E G  P  S 
Sbjct: 719 EGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSI 778

Query: 418 IQLVADSWRAIGLAREA 434
              +    R  G + +A
Sbjct: 779 CDNLITGLREEGRSHDA 795



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 189/385 (49%), Gaps = 5/385 (1%)

Query: 60  MKPDSILFNAMI-NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           MKP   LF+ M+ + CSES  V E+ +++  MK  G  P+ ++ N  ++   +  + E++
Sbjct: 110 MKP---LFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDT 166

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           L+L   + +   ++P+   Y   ++A      ++ A  ++  M   G+ P    YN +  
Sbjct: 167 LQLFSEIVES-GLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIG 225

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
              +      AE++  EM + +V PN  T   ++ GYCK G +E+A     RMK   V P
Sbjct: 226 GLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEP 285

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
            ++ FNSL+ G    +  +   + L  ME +G  PD  T++T+ D     G +     + 
Sbjct: 286 TIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLS 345

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           ++ V+ G++   +  SIL     + G  +KAE +L    + G+ P  V F T+++G+C  
Sbjct: 346 EEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQV 405

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
             + +A +  EKM  +G+ PN  TY +L+  + E K    AE+ ++ M EKGV P   T 
Sbjct: 406 GDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETY 465

Query: 419 QLVADSWRAIGLAREAKRVLKSAEE 443
             + D +    L     ++L+  E+
Sbjct: 466 NTLIDGYGRSCLFDRCFQILEEMEK 490



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 183/362 (50%), Gaps = 7/362 (1%)

Query: 55  VEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK 114
           ++KDG+ P     N  + +   +   ++ +++F ++ +SG +P    Y   I+    +G 
Sbjct: 138 MKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGD 197

Query: 115 PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYN 174
            + +++L+  M +   V P    YN+++   C +  +++A  +  +M+   + P+ +TYN
Sbjct: 198 LKRAIELMTCMKRG-GVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYN 256

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           TL   Y + G+   A  +   M+   V P   T   +++G C+   ME+A R L  M+  
Sbjct: 257 TLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVY 316

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLM 291
              P+   + +L  G L   +   VD ++TL EE    GV+    T S +++A    G M
Sbjct: 317 GFVPDRFTYTTLFDGHLKCGN---VDASITLSEEAVRKGVQILDYTCSILLNALCKEGNM 373

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            K +E+    ++ G+ P    F+ +  GY + G+  KA + +  M   G+ PN V + ++
Sbjct: 374 EKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSL 433

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           +  +C    M+ A    +KM E G+ PN++TY TL+ GYG +    R  ++L+ ME+KG+
Sbjct: 434 VKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGL 493

Query: 412 RP 413
           +P
Sbjct: 494 KP 495



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 138/256 (53%), Gaps = 8/256 (3%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A   F+ ++     PTL+TY  L+  L ++ +     +L S++ + G+  D I +
Sbjct: 546 GKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITY 605

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N++I+  S +GNV +A+++++ MK SG KPT +TY+ LI G G     +E L L++ + Q
Sbjct: 606 NSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCG-----KEGLVLVEKIYQ 660

Query: 128 D---KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           +    N+ P+   YN L+  +     +++A ++   M A GIQPD +TYN L   + + G
Sbjct: 661 EMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEG 720

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
             ++ + ++ +M+   + P   T  I++ G+CK  + + A  +   M E    P++ + +
Sbjct: 721 RMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICD 780

Query: 245 SLIKGFLDIKDSDGVD 260
           +LI G  +   S   D
Sbjct: 781 NLITGLREEGRSHDAD 796


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 200/397 (50%), Gaps = 1/397 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  PT++TY TL++ L R+   + I SL+S++ +  + P+  ++N++I+A  +  +  +
Sbjct: 323 KGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQ 382

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+ + ++M   GC P   T++TLI G    G+ +E+ +LL+  ++   + PN  +Y  L+
Sbjct: 383 ALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTR-WELNPNLSSYTSLI 441

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
             +C +  +  A N++ +M+  G  PD VT+  L       G+   A  +  +M   Q+ 
Sbjct: 442 HGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLL 501

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+     +++SG CK+  +  A   +  M E  VHP+  V+ +LI GF+  +  D   K 
Sbjct: 502 PDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKI 561

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              ME+ G+ PDVV ++ ++  +   G+M +  E    M K G  PD   ++ L  GY +
Sbjct: 562 FEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAK 621

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G    A S+L  M K    PNVV ++++I+G+C       A  ++  M   G+ PN+ T
Sbjct: 622 QGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVIT 681

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           Y  L+    +  +  RA    + M      P   T+ 
Sbjct: 682 YTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLH 718



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 201/424 (47%), Gaps = 10/424 (2%)

Query: 32  YTT--LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           Y+T  +V  L  +   +  L LI      G  P+++ +N +I+     G+V   + +  +
Sbjct: 260 YSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGE 319

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M+  G  PT  TY TL+   G  G  E+   LL  M +++ + PN + YN ++ A C   
Sbjct: 320 MEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEM-RERRLPPNVQIYNSVIDALCKCR 378

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
           S  +A  V+ +M A G  PDA+T++TL     Q G    AE++L E    ++ PN  +  
Sbjct: 379 SASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYT 438

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            ++ G+C  G +  A   L  M E    P++V F +LI G +    +  V +AL + E+ 
Sbjct: 439 SLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLV---VAGQVSEALLVREKM 495

Query: 270 GVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
             +   PD   ++ ++       ++   + + ++M++  + PD +V++ L  G++R    
Sbjct: 496 AARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESL 555

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +A  I   M + G+HP+VV +  +I G+C    M  A+     M ++G  P+  TY TL
Sbjct: 556 DEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTL 615

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
           + GY +      A  LL  M ++  +P       + + +  +G   +A   L  + E + 
Sbjct: 616 IGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLG-DTDAAECLFGSMESQG 674

Query: 447 SMPN 450
             PN
Sbjct: 675 LFPN 678



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 193/416 (46%), Gaps = 5/416 (1%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMK---PDSILFNAMINACSESGNVDEAMKIFQ 88
           ++ L+  L R  RF ++ + +  +   G     P      A++   +++G   +A ++ Q
Sbjct: 153 HSALLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQ 212

Query: 89  KMKDS-GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
           + ++  G  P  +  N L++      + +++ KL   M  +++   +D +  ++VR  C 
Sbjct: 213 RAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEES-GADDYSTCVMVRGLCL 271

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
           +  +E+   ++     +G  P+AV YN L   Y + G+  R   +L EM+   + P   T
Sbjct: 272 EGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVT 331

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
            G ++S   ++G++E     L  M+E  + PN+ ++NS+I      + +      L  M 
Sbjct: 332 YGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMF 391

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
             G  PD +TFST++      G + + + +  +  +  + P++  ++ L  G+   GE  
Sbjct: 392 AGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVI 451

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            A ++L  M + G  P+VV F  +I G   A ++  A+ + EKM    + P+   Y  L+
Sbjct: 452 VASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLI 511

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            G  + K    A  L++ M E+ V P K     + D +       EA+++ +  E+
Sbjct: 512 SGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQ 567



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/468 (20%), Positives = 202/468 (43%), Gaps = 28/468 (5%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +   +   G  P  IT++TL++ L ++ R +    L+ +  +  + P+   + ++I
Sbjct: 382 QALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLI 441

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +     G V  A  +  +M + G  P   T+  LI G    G+  E+L + + M+  + +
Sbjct: 442 HGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAA-RQL 500

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+   YN+L+   C K  +  A N++ +M+   + PD   Y TL   + +      A +
Sbjct: 501 LPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARK 560

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +   M+   + P+      ++ GYC+ G M +A+  +  M+++   P+   + +LI G+ 
Sbjct: 561 IFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYA 620

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
              +  G    L  M +   +P+VV +S++++ +   G     + +F  M   G+ P++ 
Sbjct: 621 KQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVI 680

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM---------- 361
            ++IL     +  +  +A      M      PN     ++++G CN++            
Sbjct: 681 TYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTV 740

Query: 362 -----QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
                   + I+  +     +P    Y  +++          A +L   M  KG +P  +
Sbjct: 741 NLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSA 800

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN--KKDEIAVESIHR 462
           T   +   + ++G +RE + +L          PN  ++DE+ V S ++
Sbjct: 801 TFLSLLYGFCSVGKSREWRTIL----------PNEFQRDELEVASRYK 838


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 206/464 (44%), Gaps = 41/464 (8%)

Query: 16  IFNCLIEEGH---RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           +FN +I E      P L TY+ L+    R  R +   +    + K G + ++I+ N ++ 
Sbjct: 78  LFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLK 137

Query: 73  ACSESGNVDEAMKIF-QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ---- 127
              ++  + EAM I  ++M + GC P   +YNTL+KG+ N  + EE+L+LL +M+     
Sbjct: 138 GLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGR 197

Query: 128 ---------------------------------DKNVKPNDRTYNILVRAWCSKNSIEEA 154
                                            D+ ++PN  TY  ++   C    ++ A
Sbjct: 198 SCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRA 257

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
             V  +M+  G++PD  TYN L   Y   G+     +ML EM  + ++P+  T G +++ 
Sbjct: 258 EGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNY 317

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
            C  G   +A  F   M    + PN+ ++  LI G+        +   L LM E G+ PD
Sbjct: 318 LCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPD 377

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
              F+ I  A++   ++ +   IF+ M + G+ PD+  F  L     + G    A     
Sbjct: 378 HHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFN 437

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            M   GV PN+ +F +++ G C   K ++A   Y +M   GI P++  + T+L       
Sbjct: 438 QMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKG 497

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           Q  +A+ L+ +ME  G RP   +   +      +G   EA + L
Sbjct: 498 QVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSL 541



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 194/388 (50%), Gaps = 3/388 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P +++Y T++     + +     +L  ++   G++P+ + +  +I+   ++  VD A  +
Sbjct: 201 PNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGV 260

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           FQ+M D G KP   TYN LI GY ++GK +E +++L+ MS    +KP+  TY  L+   C
Sbjct: 261 FQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSA-HGLKPDCYTYGSLLNYLC 319

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           +     EA      M+  GI+P+   Y  L   YA  G       +L  M  N + P+  
Sbjct: 320 NNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHH 379

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI-KDSDGVDKALTL 265
              II + Y K+  +++AM    +MK+  + P++V F +LI     + +  D V K   +
Sbjct: 380 IFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQM 439

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M E GV P++  F++++    +     K +E + +M+  GI PD+  F+ +       G+
Sbjct: 440 MNE-GVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQ 498

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             KA+ ++  M + G  P+V+ +TT+I G C   ++  A    + M  +G+ P+  TY T
Sbjct: 499 VMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNT 558

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           LL GY  A +   A  + + M   G+ P
Sbjct: 559 LLHGYCRAGRIDDAYGVFREMLRNGITP 586



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 204/410 (49%), Gaps = 1/410 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G+  +A+ +F  +++ G +P ++TYTT++  L + +       +  ++   G+
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD+  +N +I+     G   E +++ ++M   G KP   TY +L+    N G+  E+  
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M + K +KPN   Y IL+  + +K ++ E  +++  MV +G+ PD   +N +  AY
Sbjct: 330 FFDSMIR-KGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+      A  +  +M+   + P+    G ++   CK G ++DA+    +M    V PN+
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            VFNSL+ G   +   +   +    M   G++PDVV F+TI+    + G + K Q + D 
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL 508

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M + G  PD+  ++ L  G+   G   +A   L  M   G+ P+   + T++ G+C A +
Sbjct: 509 MERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +  A  ++ +M   GI P + TY T+L G    ++   A+EL   M   G
Sbjct: 569 IDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSG 618



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 195/421 (46%), Gaps = 4/421 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKS---ILSLISKVEKDGMKPDSILFNAMINACSESG 78
           E G  P +++Y TL+     +KR +    +L +++  +     P+ + +  +IN     G
Sbjct: 158 ELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEG 217

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
            VD+A  +F +M D G +P   TY T+I G       + +  + Q M  DK VKP++ TY
Sbjct: 218 QVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMI-DKGVKPDNDTY 276

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           N L+  + S    +E   ++ +M A G++PD  TY +L       G    A      M  
Sbjct: 277 NCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIR 336

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
             ++PN    GI++ GY  +G + +    L  M E  + P+  +FN +   +      D 
Sbjct: 337 KGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDE 396

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
                  M++ G+ PDVV F  ++DA    G +      F+ M+  G+ P+I VF+ L  
Sbjct: 397 AMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVY 456

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           G     + +KA+     M   G+ P+VV F T++   C   ++ +A  + + M  +G  P
Sbjct: 457 GLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRP 516

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           ++ +Y TL+ G+    +   A + L VM   G++P + T   +   +   G   +A  V 
Sbjct: 517 DVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVF 576

Query: 439 K 439
           +
Sbjct: 577 R 577



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/465 (22%), Positives = 214/465 (46%), Gaps = 3/465 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EA + F+ +I +G +P +  Y  L+     +     +  L++ + ++G+
Sbjct: 315 LNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGL 374

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES-L 119
            PD  +FN +  A ++   +DEAM IF KMK  G  P    +  LI     +G+ +++ L
Sbjct: 375 SPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVL 434

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K  Q+M++   V PN   +N LV   C+ +  E+A    ++M+  GI+PD V +NT+   
Sbjct: 435 KFNQMMNE--GVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCN 492

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
               G+  +A++++  M+    RP+  +   ++ G+C  G +++A + L  M  + + P+
Sbjct: 493 LCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPD 552

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
              +N+L+ G+      D        M   G+ P VVT+STI+    +     + +E++ 
Sbjct: 553 EWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYL 612

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M+ +G + +I +++I+  G  +     +A  +  S+        +  F  +I     + 
Sbjct: 613 NMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSG 672

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           + + AM ++  +   G+ P++ TY  +     E       ++L   ME+ G  P    + 
Sbjct: 673 RNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLN 732

Query: 420 LVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQ 464
            +       G    A   L   +E   S+      + +  + R +
Sbjct: 733 ALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDE 777



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 110/487 (22%), Positives = 210/487 (43%), Gaps = 39/487 (8%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F  +I++G +P   TY  L+       ++K ++ ++ ++   G+KPD   + +++N
Sbjct: 257 AEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLN 316

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
               +G   EA   F  M   G KP  + Y  LI GY   G   E   LL LM ++  + 
Sbjct: 317 YLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVEN-GLS 375

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET------ 186
           P+   +NI+  A+  K  I+EA ++  KM   G+ PD V +  L  A  + G        
Sbjct: 376 PDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLK 435

Query: 187 -----------------------------YRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
                                         +A++  FEM N  +RP+      I+   C 
Sbjct: 436 FNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCT 495

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
           +G +  A R +  M+ +   P+++ + +LI G   +   D   K+L +M   G+KPD  T
Sbjct: 496 KGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWT 555

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           ++T++  +  AG +     +F +M++ GI P +  +S +  G        +A+ +  +M 
Sbjct: 556 YNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMI 615

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
             G   N+ ++  +++G      +  A  +++ +C       + T+  ++    ++ +  
Sbjct: 616 TSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNE 675

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK--DEI 455
            A  L   +   G+ P   T  L+A++    G   E   +  SA E   + PN +  + +
Sbjct: 676 DAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLF-SAMEKSGTTPNSRMLNAL 734

Query: 456 AVESIHR 462
               +HR
Sbjct: 735 VRRLLHR 741



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 102/479 (21%), Positives = 213/479 (44%), Gaps = 48/479 (10%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKS-------ILSLISKVEKD---GMK 61
           +A  +F+ L+      ++I +  L+ A++R    +S       ++SL +++ ++    + 
Sbjct: 32  DALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVT 91

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           PD   ++ +I      G ++     F  +  SG +      N L+KG  +  +  E++ +
Sbjct: 92  PDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDI 151

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS---GIQPDAVTYNTLAR 178
           L     +    P+  +YN L++ +C++   EEA  +++ M  S      P+ V+Y T+  
Sbjct: 152 LIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVIN 211

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            +   G+  +A  +  EM +  ++PN  T   ++ G CK   ++ A     +M +  V P
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD--------------- 283
           +   +N LI G+L I     V + L  M   G+KPD  T+ ++++               
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFF 331

Query: 284 --------------------AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
                                +++ G + +  ++ + MV+ G+ PD H+F+I+   Y + 
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
               +A  I   M++ G+ P+VV F  +I   C   ++  A+  + +M   G+ PN+  +
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
            +L++G     +  +A+E    M  +G+RP       +  +    G   +A+R++   E
Sbjct: 452 NSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLME 510



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/388 (23%), Positives = 180/388 (46%), Gaps = 21/388 (5%)

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVG-------KPEESLKLLQLM 125
           A S S  +D+A+K+F  +       +   +N L+     V        + E  + L   M
Sbjct: 23  ARSGSLGLDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRM 82

Query: 126 SQDKNVK--PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            ++  +K  P+  TY+IL+  +C    +E  +     ++ SG + + +  N L +     
Sbjct: 83  IRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDA 142

Query: 184 GETYRAEQMLFE-MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE---VHPN 239
                A  +L + M      P+  +   ++ G+C E   E+A+  L+ M + +     PN
Sbjct: 143 KRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPN 202

Query: 240 LVVFNSLIKGFLDIKDSDG-VDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           +V + ++I GF     ++G VDKA  L  E    G++P+VVT++T++D    A ++ + +
Sbjct: 203 VVSYATVINGFF----TEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAE 258

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
            +F  M+  G++PD   ++ L  GY+  G+ ++   +L  M  +G+ P+   + ++++  
Sbjct: 259 GVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYL 318

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           CN  + + A   ++ M   GI PN+  Y  L+ GY          +LL +M E G+ P  
Sbjct: 319 CNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDH 378

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEE 443
               ++  ++    +  EA  +    ++
Sbjct: 379 HIFNIIFTAYAKKAMIDEAMHIFNKMKQ 406


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 211/421 (50%), Gaps = 1/421 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++E   +P +  Y  L++   +  + ++   ++ +++  G  PD + +N MI +    G 
Sbjct: 129 ILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGK 188

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D A++IF+++    C+PT  TY  LI+     G  + ++KLL  M   K ++P+  TYN
Sbjct: 189 LDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLS-KGLEPDTLTYN 247

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++R  C +  +++A+ ++  + + G +PD +TYN L R     G+    E+++ EM + 
Sbjct: 248 AIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISI 307

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
             +PN  T  I++   C++G +E+A+  L  MKE  + P+   ++ LI GF      D  
Sbjct: 308 GCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLA 367

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            + L  M   G  PD+V ++TIM      G   +  E+F+ + + G  P++  ++ L   
Sbjct: 368 TEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSA 427

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
              +G+  +A  ++  +   G+ P+ + + ++IS  C    +  A+ +   M      PN
Sbjct: 428 LWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPN 487

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + +Y  +L G  +  +   A E+L  M EKG +P ++T  L+ +     GL  EA  +  
Sbjct: 488 VVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELAN 547

Query: 440 S 440
           S
Sbjct: 548 S 548



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 192/390 (49%), Gaps = 1/390 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A+ + + +   G  P ++TY  ++ +   + +    L +  ++ KD  +P  I +  +I 
Sbjct: 157 ANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIE 216

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
           A    G +D AMK+  +M   G +P T TYN +I+G       +++ +LL+ +S  +  K
Sbjct: 217 ATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSS-RGCK 275

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+  TYNIL+R   S+    E   ++ +M++ G +P+ VT++ L     + G+   A  +
Sbjct: 276 PDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNL 335

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           L  M+   ++P+      +++G+C+EG ++ A  FL  M      P++V +N+++ G   
Sbjct: 336 LRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCR 395

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
              +D   +    ++E G  P+V +++T+  A  S+G   +  E+   ++  GI+PD   
Sbjct: 396 TGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEIT 455

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++ L     R G   +A  +L  M+     PNVV +  ++ G C   +   A+ +   M 
Sbjct: 456 YNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMT 515

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           E G  PN  TY  L+ G G +     A EL
Sbjct: 516 EKGCQPNETTYILLIEGIGFSGLRAEAMEL 545



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 194/408 (47%), Gaps = 8/408 (1%)

Query: 41  RQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS 100
           R  ++   L  +  +   G  PD IL   +I     S N+ +A ++ + ++  G KP   
Sbjct: 81  RAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVF 139

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
            YN LI G+    + E + ++L  M + +   P+  TYNI++ ++CS+  ++ A  +  +
Sbjct: 140 AYNALISGFIKANQLENANRVLDRM-KSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEE 198

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           ++    +P  +TY  L  A    G    A ++L EM +  + P+  T   I+ G CKE  
Sbjct: 199 LLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMM 258

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           ++ A   L  +      P+++ +N L++  L        +K ++ M   G KP+VVT S 
Sbjct: 259 VDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSI 318

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++      G + +   +   M + G++PD + +  L  G+ R G    A   L  M   G
Sbjct: 319 LIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDG 378

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL---LWGYGEAKQPW 397
             P++V + T+++G C   K  +A+ ++EK+ E+G  PN+ +Y TL   LW  G+    +
Sbjct: 379 CLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDR---Y 435

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
           RA E++  +  +G+ P + T   +       G+  EA  +L   +  R
Sbjct: 436 RALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGR 483



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 183/377 (48%), Gaps = 15/377 (3%)

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMS 126
           ++N    +G  +E++   + M D G  P       LIKG+    N+GK    +++L+   
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILE--- 131

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             +  KP+   YN L+  +   N +E A  V+ +M + G  PD VTYN +  ++   G+ 
Sbjct: 132 --RYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKL 189

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++  E+  +   P   T  I++     +G ++ AM+ L  M    + P+ + +N++
Sbjct: 190 DLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAI 249

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           I+G         VDKA  L+      G KPD++T++ ++    S G   + +++  +M+ 
Sbjct: 250 IRGMC---KEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMIS 306

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G +P++   SIL     R G+ ++A ++L SM++ G+ P+   +  +I+G+C   ++  
Sbjct: 307 IGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDL 366

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ-LVA 422
           A    E M   G  P++  Y T++ G     +  +A E+ + ++E G  P  S+   L +
Sbjct: 367 ATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFS 426

Query: 423 DSWRAIGLAREAKRVLK 439
             W +    R  + +LK
Sbjct: 427 ALWSSGDRYRALEMILK 443



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 146/290 (50%), Gaps = 1/290 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +   L   G +P +ITY  L+  L  + ++     LIS++   G KP+ +  + +I
Sbjct: 261 KAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILI 320

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                 G V+EA+ + + MK+ G KP    Y+ LI G+   G+ + + + L+ M  D  +
Sbjct: 321 GTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCL 380

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+   YN ++   C     ++A  V  K+   G  P+  +YNTL  A    G+ YRA +
Sbjct: 381 -PDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALE 439

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           M+ ++ N  + P+E T   ++S  C++G +++A+  L  M+     PN+V +N ++ G  
Sbjct: 440 MILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLC 499

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            +  ++   + L  M E G +P+  T+  +++    +GL  +  E+ + +
Sbjct: 500 KVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSL 549



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 127/249 (51%), Gaps = 1/249 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +  L+ +GK  E   + + +I  G +P ++T++ L+  L R  + +  ++L+  +++ G+
Sbjct: 285 LRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGL 344

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD+  ++ +I      G +D A +  + M   GC P    YNT++ G    GK +++L+
Sbjct: 345 KPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALE 404

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + + +     PN  +YN L  A  S      A  ++ K++  GI PD +TYN+L    
Sbjct: 405 VFEKLDE-VGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCL 463

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A ++L +MQ+ + RPN  +  II+ G CK     DA+  L  M E    PN 
Sbjct: 464 CRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNE 523

Query: 241 VVFNSLIKG 249
             +  LI+G
Sbjct: 524 TTYILLIEG 532


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 118/479 (24%), Positives = 220/479 (45%), Gaps = 1/479 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+LV   K      +++ +   G +P ++T+ TL+ AL R  + ++ + ++ ++   G+
Sbjct: 61  LNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGV 120

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   F  ++    E G+++ A+++  +M + GC  T  T N LI GY  +G+ E++L 
Sbjct: 121 APDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALG 180

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            +Q    D   +P+  TYN  V   C  + +  A  V+  MV  G  PD  TYN +    
Sbjct: 181 YIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 239

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A+ +L +M +    P+  T   +++  C    +E+A+    ++    V P++
Sbjct: 240 CKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDV 299

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FN LI     + D     +    M+  G  PD VT++T++D   S G +GK  ++  D
Sbjct: 300 YTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD 359

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G       ++ +  G  +    ++AE +   M   G+  N + F T+I G C   K
Sbjct: 360 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 419

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  +  +M   G+ PN  TY ++L  Y +     +A ++L+ M   G      T   
Sbjct: 420 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 479

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGV 479
           + +     G  + A +VL+           K     ++S+ R+ N+  + S F ++  V
Sbjct: 480 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV 538



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 201/411 (48%), Gaps = 2/411 (0%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
           I +G  P  ITY T V  L +       L ++  + ++G  PD   +N ++N   ++G +
Sbjct: 186 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 245

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           +EA  I  +M D GC P  +T+NTLI       + EE+L L + ++  K V P+  T+NI
Sbjct: 246 EEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV-KGVSPDVYTFNI 304

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+ A C       A  +  +M  SG  PD VTYNTL       G+  +A  +L +M++  
Sbjct: 305 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 364

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
              +  T   I+ G CK+  +E+A     +M    +  N + FN+LI G    K  D   
Sbjct: 365 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 424

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           + +  M   G++P+ +T+++I+  +   G + K  +I + M   G E D+  +  L  G 
Sbjct: 425 ELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 484

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            +AG  Q A  +L  MR  G+ P    +  V+        ++ A+S++ +M E+G  P+ 
Sbjct: 485 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 544

Query: 381 KTYETLLWGYGEAKQPWR-AEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
            TY+ +  G      P + A + +  M +KG  P+ S+ +++A+    +G+
Sbjct: 545 LTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGM 595



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 202/420 (48%), Gaps = 7/420 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +   + Y  L+  L    + K + S+ S++   G+KPD + FN ++ A   +  V  A
Sbjct: 49  GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + + ++M   G  P  +T+ TL++G+   G  E +L++   M +         T N+L+ 
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE-MGCSATKVTVNVLIN 167

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +C    +E+A   + + +A G +PD +TYNT      Q      A +++  M      P
Sbjct: 168 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 227

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T  I+V+  CK G +E+A   L +M +    P++  FN+LI         + +++AL
Sbjct: 228 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALC---TGNRLEEAL 284

Query: 264 TLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
            L  +    GV PDV TF+ +++A    G       +F++M  +G  PD   ++ L    
Sbjct: 285 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 344

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
              G+  KA  +L  M   G   + + + T+I G C  ++++ A  ++++M   GI+ N 
Sbjct: 345 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 404

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            T+ TL+ G  + K+   A EL+  M  +G++P   T   +   +   G  ++A  +L++
Sbjct: 405 ITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 464



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 161/315 (51%), Gaps = 6/315 (1%)

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           ++ +   YN L+      + ++   +V  +M A GI+PD VT+NTL +A  +  +   A 
Sbjct: 50  IQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 109

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            ML EM +  V P+E T   ++ G+ +EG++E A+R   RM E+      V  N LI G+
Sbjct: 110 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 169

Query: 251 LDIKDSDGVDKALTLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             +     V+ AL  +++    G +PD +T++T ++       +G   ++ D MV+ G +
Sbjct: 170 CKLGR---VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 226

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+  ++I+     + G+ ++A+ IL  M   G  P++  F T+I+  C   +++ A+ +
Sbjct: 227 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 286

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
             ++   G++P++ T+  L+    +   P  A  L + M+  G  P + T   + D+  +
Sbjct: 287 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 346

Query: 428 IGLAREAKRVLKSAE 442
           +G   +A  +LK  E
Sbjct: 347 LGKLGKALDLLKDME 361



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 37/231 (16%)

Query: 256 SDGVDKALTLMEE-FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
            D VD  L  ++  FG++ D V ++ +++       M   + ++ +M   GI+PD+  F+
Sbjct: 34  DDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFN 93

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            L K   RA + + A  +L  M   GV P+   FTT++ G+     ++ A+ +  +M E+
Sbjct: 94  TLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEM 153

Query: 375 -----------------------------------GINPNLKTYETLLWGYGEAKQPWRA 399
                                              G  P+  TY T + G  +      A
Sbjct: 154 GCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHA 213

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            +++ VM ++G  P   T  +V +     G   EAK +L     DR  +P+
Sbjct: 214 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM-VDRGCLPD 263



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/230 (20%), Positives = 93/230 (40%), Gaps = 41/230 (17%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   +A  I   +   G    ++TY TL+  L +  R +  L ++  +   GM+P    
Sbjct: 452 QGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKA 511

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N ++ +     N+ +A+ +F++M +                   VG+P ++L       
Sbjct: 512 YNPVLQSLFRRNNIRDALSLFREMAE-------------------VGEPPDAL------- 545

Query: 127 QDKNVKPNDRTYNILVRAWCSKNS-IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG- 184
                     TY I+ R  C     I+EA++ + +MV  G  P+  ++  LA      G 
Sbjct: 546 ----------TYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGM 595

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           + Y    +   M+   +R ++ +    + GY K     DA+    R  E+
Sbjct: 596 DDYFIRAIEIIMEKVDLRESDVSA---IRGYLKIRKFYDALATFGRFLEI 642



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 66/136 (48%), Gaps = 1/136 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+   A  +   +  +G RPT   Y  ++ +L R+   +  LSL  ++ + G 
Sbjct: 481 INGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGE 540

Query: 61  KPDSILFNAMINA-CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
            PD++ +  +    C   G + EA     +M D G  P  S++  L +G  N+G  +  +
Sbjct: 541 PPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFI 600

Query: 120 KLLQLMSQDKNVKPND 135
           + ++++ +  +++ +D
Sbjct: 601 RAIEIIMEKVDLRESD 616


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 215/418 (51%), Gaps = 11/418 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  EA  +   +I++G  PT+  YT  + +L    R    + L+ K++K G 
Sbjct: 279 INGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGC 338

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   + A+I+  S  G  + A+ ++ KM   G  PT  TY+ LI      G+ E +L 
Sbjct: 339 GPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALT 398

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M    ++ PN  TYN++++ +CS   I++A  +  +M+ +G  P+ +TYN +   Y
Sbjct: 399 IFEWMLSHDSL-PNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIY 457

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A ++L  M+ N ++ +  T   ++SG+ + G +E A      M E  + PN+
Sbjct: 458 FKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNV 517

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +N++I G+L +     VD AL L   M E G  P   T++ ++  +S    + + +  
Sbjct: 518 VTYNAIINGYLTVAK---VDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENF 574

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
              MVK G+ P++  ++    G  + G    A  I   M+K    PN+  ++++I G C 
Sbjct: 575 CGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQ 634

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
             + + A    E++ + G  PN+ TY TL+ G     + + A++L++ M++KG++P +
Sbjct: 635 EGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSE 688



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 210/443 (47%), Gaps = 1/443 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + IL  KGK  EA  I   +   G  P   TYT+L+    +         +  ++ KDG 
Sbjct: 209 IKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGC 268

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+S+ ++A+IN     G ++EAM + ++M D G +PT   Y   I    + G+  E++K
Sbjct: 269 DPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVK 328

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M + +   PN +TY  L+         E A  V +KM+A G+ P AVTY+ L    
Sbjct: 329 LLGKMKK-RGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQL 387

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A  +   M ++   PN  T  +I+ G+C  G ++ A     +M +    PN+
Sbjct: 388 YVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNV 447

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +N +I  +      +   + L +M+  G+K D  T++ ++  +S  G +     +F++
Sbjct: 448 ITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNE 507

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ GI P++  ++ +  GY+   +   A ++   M + G  P+   +  +ISG+    +
Sbjct: 508 MVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNR 567

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A +   KM + G+ PN+ TY + + G  +  +   A ++   M+++   P   T   
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSS 627

Query: 421 VADSWRAIGLAREAKRVLKSAEE 443
           + D     G A +A+R+L    E
Sbjct: 628 LIDGLCQEGQAEDAERLLDDGCE 650



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/528 (23%), Positives = 232/528 (43%), Gaps = 79/528 (14%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  EA  +   + + G  P + TYT L++ L+R  +F+  + +  K+  DG+ P 
Sbjct: 317 LCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPT 376

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ ++A+IN     G  + A+ IF+ M      P T TYN +IKG+ ++G  +++  +  
Sbjct: 377 AVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFD 436

Query: 124 LMSQDKNVKPNDRTYNILVR--------------------------AWCSKNSI------ 151
            M +     PN  TYNI++                            W   N I      
Sbjct: 437 QMLK-AGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRG 495

Query: 152 ---EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
              E A+++  +MV  GI P+ VTYN +   Y    +   A  + ++M  +   P+  T 
Sbjct: 496 GKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTY 555

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
            +++SG+ K   + +A  F  +M +  + PN++ + S I G      +    K    M++
Sbjct: 556 NMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKK 615

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
               P++ T+S+++D     G     + + DD    G EP++  ++ L +G    G   +
Sbjct: 616 RDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYE 671

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A+ ++ SM+K G+ P+  ++  ++ G C  ++++ A+ I++ M   G  P L  Y+ L+ 
Sbjct: 672 ADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALIC 731

Query: 389 GYGEA--------------KQPWRAE---------------------ELLQVMEEKGVRP 413
              +A              K+ W ++                     ELL VME +    
Sbjct: 732 ALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTL 791

Query: 414 KKSTIQLVADSWRAIGLAREAKRVLKS----AEEDRQSMPNKKDEIAV 457
              T  ++A    A+G + E  ++ K      E+ +Q+    +D+IA+
Sbjct: 792 NFQTRVMLARELSALGCSIEIPQISKQLGIVKEKQKQTADVLRDDIAL 839



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 98/417 (23%), Positives = 190/417 (45%), Gaps = 17/417 (4%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKS----ILSLISKVEKDG 59
           L+ K KPH   ++ N L    +  +++ +   V+   R   FK      +S+++++ +D 
Sbjct: 72  LIPKLKPH---HVVNLLDTHNNTESVLRFFHWVS---RTHFFKHDMSCFVSMLNRLVRDR 125

Query: 60  M-KPDSILFNAMINACSESGNVDEAMKIFQKMK---DSGCKPTTSTYNTLIKGYGNVGKP 115
           +  P   +   MI +C   G V   +++  ++    D G   T  +++TL+   G     
Sbjct: 126 LFVPADNVRILMIKSCRNEGEVKRVIQVLSEINTTYDFG--YTLYSFSTLLIQLGKFDMD 183

Query: 116 EESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
                +   M  +  ++PN  T+N +++  C+K  ++EA  ++  +   G  PD  TY +
Sbjct: 184 GLGRDVYIEM-LNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTS 242

Query: 176 LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
           L   + + G    A +M   M  +   PN  T   +++G C EG +E+AM  L  M +  
Sbjct: 243 LIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKG 302

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           + P +  +   I    D   S    K L  M++ G  P+V T++ ++   S  G      
Sbjct: 303 IEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAI 362

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
            ++  M+  G+ P    +S L       G  + A +I   M  +   PN   +  +I G+
Sbjct: 363 GVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGF 422

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
           C+   +Q+A +I+++M + G +PN+ TY  ++  Y +      A  LL++M+  G++
Sbjct: 423 CSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLK 479



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 137/288 (47%), Gaps = 8/288 (2%)

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
           +V  +M+ SGI+P+  T+N + +     G+   AE ++  + +    P+  T   ++ G+
Sbjct: 188 DVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGH 247

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG-VDKALTLMEEF---GV 271
           CK GN++ A     RM +    PN V +++LI G      S+G +++A+ ++EE    G+
Sbjct: 248 CKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLC----SEGRLEEAMDMLEEMIDKGI 303

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           +P V  ++  + +   AG   +  ++   M K G  P++  ++ L  G  R G+ + A  
Sbjct: 304 EPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIG 363

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +   M   G+ P  V ++ +I+      + + A++I+E M      PN +TY  ++ G+ 
Sbjct: 364 VYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFC 423

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
                 +A  +   M + G  P   T  ++   +   G    A R+L+
Sbjct: 424 SIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLE 471



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 100/205 (48%), Gaps = 5/205 (2%)

Query: 259 VDKALTLMEEFGVKPD----VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           V + + ++ E     D    + +FST++       + G  ++++ +M+ +GI P++  F+
Sbjct: 147 VKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFN 206

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            + K     G+ Q+AE I+  +  YG  P+   +T++I G C    +  A  ++++M + 
Sbjct: 207 AMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKD 266

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G +PN  TY  L+ G     +   A ++L+ M +KG+ P      +   S    G + EA
Sbjct: 267 GCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEA 326

Query: 435 KRVLKSAEEDRQSMPNKKDEIAVES 459
            ++L   ++ R   PN +   A+ S
Sbjct: 327 VKLLGKMKK-RGCGPNVQTYTALIS 350


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 203/396 (51%), Gaps = 1/396 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+L  +GK  +A      +   G +P ++TY T+V       R ++  ++++ +++  +
Sbjct: 228 INVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKI 287

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PDS  + ++I+   + G ++EA KIF++M   G +P+   YNTLI G+ N G  + +  
Sbjct: 288 EPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASA 347

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M + K + P   TYN L+ A   +   +EA  ++ ++   GI PDA+TYN L   Y
Sbjct: 348 YKDEMLK-KGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGY 406

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +     +A  +  EM  + ++P ++T   ++    K+  M++A     ++    V P+ 
Sbjct: 407 CRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDA 466

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           ++FN+LI G     +  G  + L  M+   V PD VTF+TIM      G + + +E+FD+
Sbjct: 467 IMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDE 526

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M + GI+PD   F+ L  GY R G+ + A  +   M   G +P V+ +  ++ G C   +
Sbjct: 527 MKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQE 586

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
              A  + ++M   G+ P+  TY TL+ G  +   P
Sbjct: 587 GDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIP 622



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 207/413 (50%), Gaps = 7/413 (1%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           + ++ T+  ++  L ++ + K     +  +E  G+KP+ + +N +++    SG V+ A  
Sbjct: 218 KSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADA 277

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           I   MK    +P + TY +LI G    G+ EE+ K+ + M Q K ++P+   YN L+  +
Sbjct: 278 ILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQ-KGLRPSAVIYNTLIDGF 336

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C+K +++ A     +M+  GI P   TYN+L  A      T  AE M+ E+Q   + P+ 
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDA 396

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD---IKDSDGVDKA 262
            T  I+++GYC+  N + A      M    + P    + SL+        +K++D + K 
Sbjct: 397 ITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           +T     GV PD + F+ ++D   S   +    E+  DM +  + PD   F+ + +G+ R
Sbjct: 457 IT---SEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCR 513

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G+ ++A  +   M++ G+ P+ + F T+ISG+     ++ A  +  +M + G NP + T
Sbjct: 514 EGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLT 573

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           Y  L+ G  + ++   AEELL+ M  KG+ P  +T   + +    + +  E K
Sbjct: 574 YNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENK 626



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 200/409 (48%), Gaps = 36/409 (8%)

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           SI+F+ +I +C +    DEA + F  MK+ G  PT  T N+L+  +  + + E +  L  
Sbjct: 151 SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYA 210

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + + +K +  T+NI++   C +  +++A + V  M  SG++P+ VTYNT+   Y   
Sbjct: 211 EMFRLR-IKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A+ +L  M+  ++ P+  T G ++SG CK+G +E+A +    M +  + P+ V++
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 244 NSLIKGF-----LDI----KD--------------------------SDGVDKALTLMEE 268
           N+LI GF     LD+    KD                          +D  +  +  ++E
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G+ PD +T++ +++ +       K   + D+M+ +GI+P    ++ L     +    ++
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A+ +   +   GV P+ +MF  +I G C+   ++ A  + + M  + + P+  T+ T++ 
Sbjct: 450 ADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQ 509

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           G+    +   A EL   M+ +G++P   +   +   +   G  ++A RV
Sbjct: 510 GHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRV 558



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 170/359 (47%), Gaps = 5/359 (1%)

Query: 102 YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
           ++ LIK   ++ + +E+ +    M ++K V P   T N L+  +   N  E AW +  +M
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTM-KEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212

Query: 162 VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM 221
               I+    T+N +     + G+  +A+  +  M+ + V+PN  T   IV GYC  G +
Sbjct: 213 FRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRV 272

Query: 222 EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
           E A   L  MK  ++ P+   + SLI G       +   K    M + G++P  V ++T+
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +D + + G +       D+M+K GI P +  ++ L           +AE ++  +++ G+
Sbjct: 333 IDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGI 392

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
            P+ + +  +I+G+C     ++A  ++++M   GI P  KTY +LL    +  +   A++
Sbjct: 393 SPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADD 452

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESI 460
           L + +  +GV P       + D   +    + A  +LK  + DR  +P   DE+   +I
Sbjct: 453 LFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLK--DMDRMKVP--PDEVTFNTI 507



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 59/112 (52%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  EA  +F+ +   G +P  I++ TL++  +R+   K    + +++   G  P  + 
Sbjct: 514 EGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLT 573

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           +NA++    ++   D A ++ ++M   G  P  +TY TLI+G   V  P+E+
Sbjct: 574 YNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDEN 625


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 213/420 (50%), Gaps = 9/420 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  EA  +   ++++G  PT+ TYT  + +L         + L+ K++K G 
Sbjct: 279 INGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGC 338

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   F A+I+  S  G  + A+ ++ KM   G  PTT TYN LI      G+ E +  
Sbjct: 339 VPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFT 398

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M    ++ P+ +TYN +++ +C    I++A  +  KM+ +G  P+ +TYNTL   Y
Sbjct: 399 IFKWMLSHGSL-PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGY 457

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A ++L  M+ N ++P+  T   ++SG+ + G +E A    Y M E  + PN 
Sbjct: 458 CKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNH 517

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V + ++I G+ ++     VD AL L   M E G  P   T++ ++  +S    + + +  
Sbjct: 518 VTYTAIIDGYFNLAK---VDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENF 574

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
              MVK G+ P++  ++    G  R G    A  I   M K    PN+  ++++I G C 
Sbjct: 575 CGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQ 634

Query: 358 AVKMQRA--MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
             + + A   ++  ++   G  PN+ TY TL+ G     + + A++L+  M++KG++P +
Sbjct: 635 EGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSE 694



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 211/480 (43%), Gaps = 38/480 (7%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +NIL  KG+  EA  I + +      P   TYT+L+    R        ++  ++ KDG 
Sbjct: 209 INILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGC 268

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+S+ ++ +IN     G ++EAM + ++M   G +PT  TY   +    + G   E+++
Sbjct: 269 DPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVE 328

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL---- 176
           LL  M + +   PN +T+  L+         E A  + +KM+A G+ P  VTYN L    
Sbjct: 329 LLGKMKK-RGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL 387

Query: 177 -------------------------------ARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                                           + +   G+  +A  +  +M      PN 
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNV 447

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   ++ GYCK+GN+ +AMR L  MK   + P+   +  LI GF      +        
Sbjct: 448 ITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M E G+ P+ VT++ I+D + +   +     +F  MV++G  P    ++++  G+ +   
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +AE+    M K G+ PNV+ +T+ I G C   +   A  I+ +M +    PNL TY +
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS 627

Query: 386 LLWGYGEAKQPWRAE--ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           L++G  +  +   AE   LL  +   G  P   T   +       G   EA +++ S ++
Sbjct: 628 LIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQK 687



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 211/434 (48%), Gaps = 8/434 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G RP+L+T+ T++  L ++ R +    ++S + +    P++  + ++I     + N
Sbjct: 193 MLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHN 252

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D A  +F +M   GC P + TY+TLI G  + G+ EE++ +L+ M Q K ++P   TY 
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQ-KGIEPTVYTYT 311

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           I + + C      EA  ++ KM   G  P+  T+  L    ++ G+   A  +  +M  +
Sbjct: 312 IPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD 371

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            + P   T   +++  C EG  E A      M      P+   +N +IK F  + D   +
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGD---I 428

Query: 260 DKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
            KA+ + ++    G  P+V+T++T++  +   G +     + + M   G++PD   ++ L
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G+ R G+ + A S+   M ++G+ PN V +T +I G+ N  K+  A++++ KM E G 
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            P+ +TY  ++ G+ +      AE     M ++G+ P   T     D     G    A +
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608

Query: 437 VLKSAEEDRQSMPN 450
           +    E+ R   PN
Sbjct: 609 IFHEMEK-RNYFPN 621



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 206/443 (46%), Gaps = 38/443 (8%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA  +   + + G  P + T+T L++ L+R  +F+  + L  K+  DG+ P 
Sbjct: 317 LCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPT 376

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ +NA+IN     G  + A  IF+ M   G  P+T TYN +IK +  +G  ++++ +  
Sbjct: 377 TVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFD 436

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +  +  PN  TYN L+  +C + ++  A  ++  M  +G++PDA TY  L   +++ 
Sbjct: 437 KMLKAGS-SPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG 495

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A  + + M  + + PN  T   I+ GY     ++DA+   ++M E    P+   +
Sbjct: 496 GKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTY 555

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N +I GF         +     M + G+ P+V+T+++ +D     G  G   +IF +M K
Sbjct: 556 NVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEK 615

Query: 304 -------------------------------------AGIEPDIHVFSILAKGYVRAGEP 326
                                                 G EP++  ++ L KG    G  
Sbjct: 616 RNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRC 675

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +A+ ++ SM+K G+ P+  ++  ++ G C  +K++ A++I+  M  +G   +L  Y+ L
Sbjct: 676 YEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKAL 735

Query: 387 LWGYGEAKQPWRAEELLQVMEEK 409
           +    +      A+ + Q M EK
Sbjct: 736 ICALCKENFIEEAQCIFQTMLEK 758



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 186/408 (45%), Gaps = 1/408 (0%)

Query: 28  TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIF 87
           TL ++TTL+  L +         +  K+   G++P  + FN MIN   + G V EA  I 
Sbjct: 166 TLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIM 225

Query: 88  QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
             +      P   TY +LI G+      + +  +   M +D    PN  TY+ L+   CS
Sbjct: 226 SHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKD-GCDPNSVTYSTLINGLCS 284

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
           +  +EEA +++ +MV  GI+P   TY     +    G +  A ++L +M+     PN +T
Sbjct: 285 EGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQT 344

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
              ++SG  ++G  E A+   ++M    + P  V +N+LI         +        M 
Sbjct: 345 FTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWML 404

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
             G  P   T++ I+  +   G + K   IFD M+KAG  P++  ++ L  GY + G   
Sbjct: 405 SHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLN 464

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            A  +L  M+  G+ P+   +T +ISG+    K++ A S++  M E GI+PN  TY  ++
Sbjct: 465 NAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAII 524

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
            GY    +   A  L   M E G  P   T  ++   +       EA+
Sbjct: 525 DGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 194/433 (44%), Gaps = 3/433 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+   A  IF  ++  G  P+  TY  ++         +  + +  K+ K G 
Sbjct: 384 INQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGS 443

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I +N +I    + GN++ AM++ + MK +G KP   TY  LI G+   GK E +  
Sbjct: 444 SPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATS 503

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M  +  + PN  TY  ++  + +   +++A  + +KMV SG  P + TYN +   +
Sbjct: 504 LFYGM-MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGF 562

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++      AE    +M    + PN  T    + G C+ G    A +  + M++    PNL
Sbjct: 563 SKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNL 622

Query: 241 VVFNSLIKGFLDIKDSDGVD--KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
             ++SLI G      ++  +    L  +  +G +P+V T++T++      G   +  ++ 
Sbjct: 623 YTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLV 682

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
             M K G++P   ++  L  G  +  + + A +I  SM   G   ++  +  +I   C  
Sbjct: 683 VSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKE 742

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
             ++ A  I++ M E   N +   +  LL G  +  +     +LL VME +       T 
Sbjct: 743 NFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802

Query: 419 QLVADSWRAIGLA 431
            ++A    A+  A
Sbjct: 803 VMLARELSALDCA 815



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 101/205 (49%), Gaps = 5/205 (2%)

Query: 259 VDKALTLMEEFGVKPD----VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           V +    + E   K D    + +F+T++       ++   ++++  M+ +GI P +  F+
Sbjct: 147 VKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFN 206

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            +     + G  Q+A+ I++ + +Y  +PN   +T++I G C    +  A +++++M + 
Sbjct: 207 TMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKD 266

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G +PN  TY TL+ G     +   A ++L+ M +KG+ P   T  +   S    G + EA
Sbjct: 267 GCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEA 326

Query: 435 KRVLKSAEEDRQSMPNKKDEIAVES 459
             +L   ++ R  +PN +   A+ S
Sbjct: 327 VELLGKMKK-RGCVPNIQTFTALIS 350


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 213/405 (52%), Gaps = 2/405 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  +A  +FN ++++G  P + TY ++V AL + +       ++ ++   G++PD + 
Sbjct: 245 QGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVT 304

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +NA+I+  S SG+  E+ K+F+KM   G  P T T+++ +      G+ +++ ++ Q M+
Sbjct: 305 YNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMT 364

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K   P+  +Y+IL+  + ++    +  N+ + M   GI  +    N L  A+A+ G  
Sbjct: 365 T-KGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMM 423

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A  +  EMQ   VRPN  T   ++S +C+ G + DAM    +M  + + PN  V++SL
Sbjct: 424 DEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSL 483

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGV-KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           I GF    D     + ++ M   G+ +P++V FS+I+ +    G +   Q++F+ ++  G
Sbjct: 484 IHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIG 543

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
             P I  F+ L  GY   G+ +KA  +L +M   G+ P+VV   T++SG+C + K+   +
Sbjct: 544 DRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGL 603

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
            ++ +M    + P   TY  +L G   A +   A+++   M + G
Sbjct: 604 ILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSG 648



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 204/450 (45%), Gaps = 39/450 (8%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK--PDSILFNAMINACSESGNVDEAM 84
           P  I+Y T++ +L    R +  L ++ ++ K+G +  PD + FN +I+   + G V +A 
Sbjct: 193 PDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKAC 252

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
            +F +M   G  P   TYN+++         +++  +L+ M  DK V+P+  TYN ++  
Sbjct: 253 NLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMV-DKGVEPDGVTYNAIIHG 311

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +      +E+  +  KM + G+ PD VT+++   +  ++G +  AE++   M      P+
Sbjct: 312 YSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPD 371

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             +  I++ GY  EG   D     + M +  +  N    N LI         D      T
Sbjct: 372 IVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFT 431

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M+  GV+P+VVT+ST++ A+   G +    E F  M+  GIEP+  V+  L  G+   G
Sbjct: 432 EMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHG 491

Query: 325 EPQKAESILTSMRKYGVH------------------------------------PNVVMF 348
           +  KA+  ++ M   G+H                                    P +V F
Sbjct: 492 DLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTF 551

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
            ++I G+C   KM++A  + + M  +GI P++ T  TL+ GY ++ +      L + M  
Sbjct: 552 NSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLH 611

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           K V+P   T  +V D     G    AK++ 
Sbjct: 612 KKVKPTTVTYNIVLDGLLRAGRTSAAKKMF 641



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 198/406 (48%), Gaps = 8/406 (1%)

Query: 16  IFN--CLIEEGHRP---TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           +FN  C  E G R    T+ TY  L+    R +R     + ++++ + G+K  +I     
Sbjct: 106 LFNRICREEAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTF 165

Query: 71  INACSESGNVDEAMKIF-QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK 129
           +     +   DEA+ +   +M +  C P   +YNT+IK      + +E+L ++Q M+++ 
Sbjct: 166 LKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEG 225

Query: 130 N-VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
               P+  ++N ++  +  +  + +A N+  +MV  G+ PD  TYN++  A  +     +
Sbjct: 226 GRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDK 285

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           AE +L +M +  V P+  T   I+ GY   G+ +++ +   +M    + P+ V F+S + 
Sbjct: 286 AEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMS 345

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
                  S   ++    M   G  PD+V++S ++  +++ G       +F  M   GI  
Sbjct: 346 SLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVS 405

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           + H  +IL   + + G   +A  + T M+  GV PNVV ++T+IS +C   ++  AM  +
Sbjct: 406 NCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKF 465

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV-RP 413
            +M  IGI PN   Y +L+ G+       +A+E +  M  KG+ RP
Sbjct: 466 SQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRP 511



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/418 (24%), Positives = 202/418 (48%), Gaps = 10/418 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   G+  +A  IF  +  +GH P +++Y+ L+     + RF  + +L   +   G+
Sbjct: 344 MSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGI 403

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL- 119
             +    N +I+A ++ G +DEAM +F +M+  G +P   TY+TLI  +  +G+  +++ 
Sbjct: 404 VSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAME 463

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGI-QPDAVTYNTLAR 178
           K  Q++S    ++PN   Y+ L+  +C    + +A   + +M++ G+ +P+ V ++++  
Sbjct: 464 KFSQMISI--GIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIH 521

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           +    G    A+ +   + +   RP   T   ++ GYC  G ME A   L  M  + + P
Sbjct: 522 SLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEP 581

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           ++V  N+L+ G+     S  +D  L L  E     VKP  VT++ ++D    AG     +
Sbjct: 582 DVVTNNTLVSGYC---KSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAK 638

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           ++F +M+ +G   DI  + IL KG  R     +A ++   +       ++ +  T+I+  
Sbjct: 639 KMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINAL 698

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
               + + A  ++  +   G+ PN+ TY  ++    +      A+ +   ME+ G  P
Sbjct: 699 YKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAP 756



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 100/467 (21%), Positives = 207/467 (44%), Gaps = 35/467 (7%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A ++   ++++G  P  +TY  ++   +    +K    +  K+   G+ PD++ F++ +
Sbjct: 285 KAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFM 344

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS----- 126
           ++  + G   +A +IFQ M   G  P   +Y+ L+ GY   G+  +   L   M+     
Sbjct: 345 SSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIV 404

Query: 127 -----------------------------QDKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
                                        Q + V+PN  TY+ L+ A+C    + +A   
Sbjct: 405 SNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEK 464

Query: 158 VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV-RPNERTCGIIVSGYC 216
             +M++ GI+P+   Y++L   +  +G+  +A++ + EM +  + RPN      I+   C
Sbjct: 465 FSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLC 524

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
            EG + DA      +  +   P +V FNSLI G+  +   +     L  M   G++PDVV
Sbjct: 525 IEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVV 584

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T +T++  +  +G +     +F +M+   ++P    ++I+  G +RAG    A+ +   M
Sbjct: 585 TNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEM 644

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
              G   ++  +  ++ G C       A++++ K+  +    ++    T++    + ++ 
Sbjct: 645 IDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRR 704

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             A +L   +   G+ P  ST  ++  +    G   EA  +  S E+
Sbjct: 705 EEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEK 751



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 172/369 (46%), Gaps = 41/369 (11%)

Query: 1   MNILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-------FKSIL 49
           +NIL+     +G   EA  +F  +  +G RP ++TY+TL++A  R  R       F  ++
Sbjct: 410 INILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMI 469

Query: 50  SL----------------------------ISKVEKDGM-KPDSILFNAMINACSESGNV 80
           S+                            IS++   G+ +P+ + F+++I++    G V
Sbjct: 470 SIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRV 529

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
            +A  +F  +   G +PT  T+N+LI GY  VGK E++  +L  M     ++P+  T N 
Sbjct: 530 MDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVS-VGIEPDVVTNNT 588

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           LV  +C    I++   +  +M+   ++P  VTYN +     + G T  A++M  EM ++ 
Sbjct: 589 LVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSG 648

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
              +  T  I++ G C+    ++A+   +++  ++   ++ + N++I     ++  +  +
Sbjct: 649 TAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEAN 708

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
                +   G+ P+V T+  ++      G + +   +F  M K+G  P   + + + +  
Sbjct: 709 DLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRML 768

Query: 321 VRAGEPQKA 329
           ++ G+  KA
Sbjct: 769 LQKGDIVKA 777



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 115/263 (43%), Gaps = 36/263 (13%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  +A  +FN +I  G RPT++T+ +L+       + +    ++  +   G++PD
Sbjct: 523 LCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPD 582

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +  N +++   +SG +D+ + +F++M     KPTT TYN ++ G    G+   + K+  
Sbjct: 583 VVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFH 642

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVA-------------------- 163
            M  D     +  TY IL++  C  +  +EA  + +K+ A                    
Sbjct: 643 EM-IDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKV 701

Query: 164 ---------------SGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
                          SG+ P+  TY  + R   + G    A+ M   M+ +   P+ R  
Sbjct: 702 RRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLL 761

Query: 209 GIIVSGYCKEGNMEDAMRFLYRM 231
             I+    ++G++  A  ++ ++
Sbjct: 762 NDIIRMLLQKGDIVKAGYYMSKV 784



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 98/221 (44%), Gaps = 1/221 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +   +F  ++ +  +PT +TY  ++  L R  R  +   +  ++   G   D   +
Sbjct: 597 GKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTY 656

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             ++     +   DEA+ +F K+    CK   +  NT+I     V + EE+  L   +S 
Sbjct: 657 KILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAIST 716

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              V PN  TY +++R    + S+EEA  +   M  SG  P +   N + R   Q G+  
Sbjct: 717 SGLV-PNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIV 775

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           +A   + ++    +     T  +++S +  +G   + ++FL
Sbjct: 776 KAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIKFL 816



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 56/122 (45%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L    +  EA+ +F  +   G  P + TY  ++  L ++   +   ++ S +EK G 
Sbjct: 695 INALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGC 754

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P S L N +I    + G++ +A     K+  +      ST + L+  + + GK  E +K
Sbjct: 755 APSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIK 814

Query: 121 LL 122
            L
Sbjct: 815 FL 816


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 204/432 (47%), Gaps = 18/432 (4%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  + + G   T  TY  L+  L      +  +++ + +  DG  PDS +++ M++   
Sbjct: 131 LFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLC 190

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
            +G   EA+ +       G  P  + YN LI GY + G  E ++ + + M Q K   PN 
Sbjct: 191 GAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGM-QSKGCLPNV 249

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           RTY  L+  +C    +E A  +  +M+ +G+ P+ VTY TL +     G    A ++L  
Sbjct: 250 RTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHS 309

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M+   + PNE TC +++   CK G +E+A +FL  + +  +  N V++ S+I        
Sbjct: 310 MEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGK 369

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            DG    +  +   G  PD   +S+++D       + +   + +DM+++G++ +   F+I
Sbjct: 370 FDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTI 429

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L   ++R       + I   M   GV P+VV +T  I  +C   +M+ A S+  +M + G
Sbjct: 430 LIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHG 489

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP--------------KKSTIQLV 421
           + PNL TY TL+ GY       +A   L+ M + G +P              K S   LV
Sbjct: 490 VRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLV 549

Query: 422 ADS---WRAIGL 430
           ADS   W+ + +
Sbjct: 550 ADSISLWKIVDM 561



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 185/384 (48%), Gaps = 1/384 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G G   EA  +F  +  +G  P    Y+ +V  L    R    ++L++     G  P+
Sbjct: 154 LCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPN 213

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             ++NA+I+    +G+++ A+ IF+ M+  GC P   TY  LI G+   GK E ++ L  
Sbjct: 214 VAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYS 273

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +   + PN  TY  L++  CS+  +E A+ +++ M A G+ P+  T   L  A  ++
Sbjct: 274 RMIE-AGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKH 332

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A+Q L  +    ++ N+     ++   CK G  + A   + ++      P+  ++
Sbjct: 333 GRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMY 392

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           +SLI G             L  M E GV+ + V F+ ++D           + I D M  
Sbjct: 393 SSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAA 452

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           AG++PD+  +++  + Y + G  + AES++  M  +GV PN+  + T+I G+ N   + +
Sbjct: 453 AGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQ 512

Query: 364 AMSIYEKMCEIGINPNLKTYETLL 387
           A S  + M + G  PN ++Y  LL
Sbjct: 513 AFSSLKNMIDNGCKPNDESYTVLL 536



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/458 (20%), Positives = 193/458 (42%), Gaps = 54/458 (11%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK   A  +++ +IE G  P ++TYTTL+     +   +    L+  +E  G+ P+    
Sbjct: 263 GKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTC 322

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+A  + G ++EA +    +   G K     Y ++I      GK + +  L+Q +  
Sbjct: 323 LVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIIT 382

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  V P+   Y+ L+   C +N + EA +++  M+ SG+Q +AV +  L   + +   + 
Sbjct: 383 EGFV-PDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSD 441

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
             + +   M    V+P+  T  + +  YC++G MEDA   + +M +  V PNL  +N+LI
Sbjct: 442 SPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLI 501

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIM-----------------DAWSSAGL 290
           KG+ ++        +L  M + G KP+  +++ ++                   W     
Sbjct: 502 KGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVD- 560

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           M   +E+ ++++K       +V+    +   +    ++A+S L  M+   + P+  ++T 
Sbjct: 561 MKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTC 620

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG--------------------- 389
           +I        ++ A+   + M +    P L++Y  ++                       
Sbjct: 621 MIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKE 680

Query: 390 YGEAKQPWR--------------AEELLQVMEEKGVRP 413
           Y   +  W+                 LL  MEE+  RP
Sbjct: 681 YNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRP 718



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 132/308 (42%), Gaps = 4/308 (1%)

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P  R  N L+ A      + +  ++  +M    +     TY TL  AY   G+   A++ 
Sbjct: 41  PPIRCLNTLLMALARHGMLSDMESLAARMPVRNLH----TYTTLINAYCHAGDLPAAKRH 96

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           L  +    + P+       V GYC+ G    A R    M +         + +L++G   
Sbjct: 97  LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCG 156

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
                        M   G  PD   +S ++     AG  G+   +  D +  G  P++ V
Sbjct: 157 AGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAV 216

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++ L  GY   G+ + A  I   M+  G  PNV  +T +I G+C + K++RAM +Y +M 
Sbjct: 217 YNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMI 276

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
           E G+ PN+ TY TL+ G         A  LL  ME  G+ P + T  ++ D+    G   
Sbjct: 277 EAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIE 336

Query: 433 EAKRVLKS 440
           EA++ L S
Sbjct: 337 EAQQFLGS 344



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 126/278 (45%), Gaps = 10/278 (3%)

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR---PNERTCGIIVSGYCKEGNMEDA 224
           P     NTL  A A++G       ML +M++   R    N  T   +++ YC  G++  A
Sbjct: 41  PPIRCLNTLLMALARHG-------MLSDMESLAARMPVRNLHTYTTLINAYCHAGDLPAA 93

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
            R L  +    + P+   + S + G+          +   LM + G      T++ ++  
Sbjct: 94  KRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQG 153

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
              AG++ +   +F  M   G  PD HV+SI+  G   AG   +A ++LT     G  PN
Sbjct: 154 LCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPN 213

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
           V ++  +I G+C+   ++ A+ I++ M   G  PN++TY  L+ G+ ++ +  RA  L  
Sbjct: 214 VAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYS 273

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
            M E G+ P   T   +     + G    A R+L S E
Sbjct: 274 RMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSME 311



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/329 (23%), Positives = 134/329 (40%), Gaps = 52/329 (15%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  + K  EA  + N +IE G +   + +T L+    R+ R  S   +  ++   G+KPD
Sbjct: 399 LCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPD 458

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +   I +  + G +++A  +  +M D G +P  +TYNTLIKGY N+G   ++   L+
Sbjct: 459 VVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLK 518

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEE-------AWNVVYKMVASGIQPDAV----- 171
            M  D   KPND +Y +L+     KNS  +        W +V   V   +  + +     
Sbjct: 519 NMI-DNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCS 577

Query: 172 ----TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER--TCGI--------------- 210
                Y+   R  ++      A+  L  MQ+  + P+E   TC I               
Sbjct: 578 SASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRF 637

Query: 211 ------------------IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
                             I+   C+EG+   A      +   E + + + +  LI G L 
Sbjct: 638 LDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQ 697

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
             ++    + L+ MEE   +P    +S +
Sbjct: 698 KGNTADCSRLLSFMEEQNCRPGSAIYSRL 726



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/365 (20%), Positives = 153/365 (41%), Gaps = 17/365 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   GK   AH +   +I EG  P    Y++L+  L R+ +    +SL++ + + G+
Sbjct: 361 IDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGV 420

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + +++ F  +I+        D    I  +M  +G KP   TY   I+ Y   G+ E++  
Sbjct: 421 QANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAES 480

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           ++  M  D  V+PN  TYN L++ + +   + +A++ +  M+ +G +P+  +Y  L    
Sbjct: 481 MMIQMI-DHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLL 539

Query: 181 AQYGETYR----------------AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
            +    +                  E++L E+   Q           +    K   +E+A
Sbjct: 540 LKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEA 599

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
             FL  M+   + P+  V+  +I+    +K      + L  M +    P + ++  I+ A
Sbjct: 600 KSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICA 659

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
               G     + IF D++      D   + IL  G ++ G       +L+ M +    P 
Sbjct: 660 LCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPG 719

Query: 345 VVMFT 349
             +++
Sbjct: 720 SAIYS 724


>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
 gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
          Length = 900

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 222/430 (51%), Gaps = 36/430 (8%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           I Y+ ++ A  +    +    L+ ++E+DG+     ++++M++  +   N ++ + +F++
Sbjct: 369 IIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFER 428

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           +K+ G KP+  +Y  L+  Y  +GK  ++L + + M +   +K N++TY++L+  +   +
Sbjct: 429 LKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEM-ESCGIKHNNKTYSMLINGFIHLH 487

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
               A+ +  +M+ SG+QPD   YN L  A+ + G   RA  +L +MQ  +++P+ R   
Sbjct: 488 DFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFR 547

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            I+ GY   G+M+ A+  L  M+     P ++ +N+LI G +           L  M   
Sbjct: 548 PIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIA 607

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH------------------ 311
           G+ P+  T++ IM  ++++G +GK  E F  + ++G++ D++                  
Sbjct: 608 GITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSA 667

Query: 312 -----------------VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
                            +++IL  G+ R G+  +AE ++  M++ GV PN+  +T+ I+ 
Sbjct: 668 LAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINA 727

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C A  MQRA  + E+M ++G+ PN+KTY TL+ G+     P RA +  + M+  G++P 
Sbjct: 728 CCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPD 787

Query: 415 KSTIQLVADS 424
           +++   +  S
Sbjct: 788 EASYHCLVTS 797



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 190/375 (50%), Gaps = 7/375 (1%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  L E G +P++I+Y  L+    +  +    LS+  ++E  G+K ++  ++ +IN   
Sbjct: 425 VFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFI 484

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
              +   A  IF++M  SG +P  + YN LI+ +  +G  + ++ +L+ M Q + ++P++
Sbjct: 485 HLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKM-QKERMQPSN 543

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           R +  ++  +     ++ A + +  M  SG  P  +TYN L     +  +  RA  +L +
Sbjct: 544 RAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDK 603

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M    + PNE T  II+ GY   G++  A  +  ++KE  +  ++ ++ +L++       
Sbjct: 604 MSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACC---K 660

Query: 256 SDGVDKALTLMEEFG---VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           S  +  AL +  E     +  +   ++ ++D W+  G + + +++   M + G+ P+IH 
Sbjct: 661 SGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHT 720

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++       +AG+ Q+AE ++  M   G+ PNV  +TT+I GW       RA+  +E+M 
Sbjct: 721 YTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMK 780

Query: 373 EIGINPNLKTYETLL 387
             G+ P+  +Y  L+
Sbjct: 781 LAGLKPDEASYHCLV 795



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 192/388 (49%), Gaps = 7/388 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+ V  GK  +A  I   +   G +    TY+ L+        F +  ++  ++ + G+
Sbjct: 445 LNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGL 504

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD  ++N +I A  + GN+D A+ I +KM+    +P+   +  +I+GY   G  + +L 
Sbjct: 505 QPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALD 564

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L LM +   V P   TYN L+     K+ ++ A +V+ KM  +GI P+  TY  + R Y
Sbjct: 565 TLDLMRRSGCV-PTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGY 623

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A  G+  +A +   +++ + ++ +      ++   CK G M+ A+     M   ++  N 
Sbjct: 624 AASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNT 683

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            ++N LI G+    D    +  +  M+E GV P++ T+++ ++A   AG M + +++ ++
Sbjct: 684 FIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEE 743

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV  G++P++  ++ L KG+ R   P +A      M+  G+ P+   +  +++   +   
Sbjct: 744 MVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRAT 803

Query: 361 MQRA------MSIYEKMCEIGINPNLKT 382
           +         +S+  +M E  +  +L+T
Sbjct: 804 VMEGSTYTGIISVCREMSENDLTVDLRT 831



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/451 (21%), Positives = 199/451 (44%), Gaps = 71/451 (15%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G++P++ +F ++++A + + ++  A+   ++MK  G + T  TY+ LI G+  +   + +
Sbjct: 293 GIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSA 352

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGI------------ 166
             L +  ++ K    N   Y+ ++ A C   ++E A  +V +M   GI            
Sbjct: 353 DNLFK-EAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMH 411

Query: 167 -----------------------QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
                                  +P  ++Y  L   Y + G+  +A  +  EM++  ++ 
Sbjct: 412 GYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKH 471

Query: 204 NERTCGIIVSG-----------------------------------YCKEGNMEDAMRFL 228
           N +T  ++++G                                   +CK GNM+ A+  L
Sbjct: 472 NNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICIL 531

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
            +M++  + P+   F  +I+G+    D       L LM   G  P V+T++ ++      
Sbjct: 532 EKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRK 591

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
             + +   + D M  AGI P+ H ++I+ +GY  +G+  KA    T +++ G+  +V ++
Sbjct: 592 HKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIY 651

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
            T++   C + +MQ A+++  +M    I  N   Y  L+ G+      W AE+L++ M+E
Sbjct: 652 ETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKE 711

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            GV P   T     ++    G  + A++V++
Sbjct: 712 DGVPPNIHTYTSYINACCKAGDMQRAEKVIE 742



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 158/344 (45%), Gaps = 46/344 (13%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  IF  ++  G +P    Y  L+ A  +       + ++ K++K+ M+P +  F  +I 
Sbjct: 492 AFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIE 551

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
             + +G++  A+     M+ SGC PT  TYN LI G     K + ++ +L  MS    + 
Sbjct: 552 GYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSI-AGIT 610

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA------------- 179
           PN+ TY I++R + +   I +A+    K+  SG++ D   Y TL RA             
Sbjct: 611 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 670

Query: 180 ----------------------YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
                                 +A+ G+ + AE ++ +M+ + V PN  T    ++  CK
Sbjct: 671 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCK 730

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
            G+M+ A + +  M ++ + PN+  + +LIKG+  +   D   K    M+  G+KPD  +
Sbjct: 731 AGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEAS 790

Query: 278 F----------STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
           +          +T+M+  +  G++  C+E+ ++ +   +   +H
Sbjct: 791 YHCLVTSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAVH 834



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 149/318 (46%), Gaps = 1/318 (0%)

Query: 96  KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
           KP+   +  +I  Y   G    +    + M + + ++PN   +  LV A+     +  A 
Sbjct: 260 KPSRREFGLMIVYYAKRGDKHHARATFENM-RARGIEPNAFVFTSLVHAYAVARDMRGAL 318

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
           + V +M + G++   VTY+ L   +A+  ++  A+ +  E +      N      I+  +
Sbjct: 319 SCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAH 378

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C+ GNME A   +  M+E  +   + V++S++ G+  I++ +        ++E G KP +
Sbjct: 379 CQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSI 438

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           +++  +++ +   G + K   I  +M   GI+ +   +S+L  G++   +   A +I   
Sbjct: 439 ISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEE 498

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M + G+ P+  ++  +I  +C    M RA+ I EKM +  + P+ + +  ++ GY  A  
Sbjct: 499 MLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGD 558

Query: 396 PWRAEELLQVMEEKGVRP 413
              A + L +M   G  P
Sbjct: 559 MKSALDTLDLMRRSGCVP 576



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/297 (21%), Positives = 130/297 (43%)

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
           W  V        +P    +  +   YA+ G+ + A      M+   + PN      +V  
Sbjct: 248 WQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHA 307

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           Y    +M  A+  +  MK   +   +V ++ LI GF  I DS   D      +      +
Sbjct: 308 YAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLN 367

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
            + +S I+ A   +G M + +E+  +M + GI+  I V+  +  GY       K   +  
Sbjct: 368 GIIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFE 427

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            +++ G  P+++ +  +++ +    K+ +A+SI ++M   GI  N KTY  L+ G+    
Sbjct: 428 RLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLH 487

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
               A  + + M   G++P ++   L+ +++  +G    A  +L+  +++R    N+
Sbjct: 488 DFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNR 544


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 213/420 (50%), Gaps = 9/420 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  EA  +   ++++G  PT+ TYT  + +L         + L+ K++K G 
Sbjct: 279 INGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGC 338

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   F A+I+  S  G  + A+ ++ KM   G  PTT TYN LI      G+ E +  
Sbjct: 339 VPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFT 398

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M    ++ P+ +TYN +++ +C    I++A  +  KM+ +G  P+ +TYNTL   Y
Sbjct: 399 IFKWMLSHGSL-PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGY 457

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A ++L  M+ N ++P+  T   ++SG+ + G +E A    Y M E  + PN 
Sbjct: 458 CKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNH 517

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V + ++I G+ ++     VD AL L   M E G  P   T++ ++  +S    + + +  
Sbjct: 518 VTYTAIIDGYFNLAK---VDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENF 574

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
              MVK G+ P++  ++    G  R G    A  I   M K    PN+  ++++I G C 
Sbjct: 575 CGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQ 634

Query: 358 AVKMQRA--MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
             + + A   ++  ++   G  PN+ TY TL+ G     + + A++L+  M++KG++P +
Sbjct: 635 EGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSE 694



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 211/480 (43%), Gaps = 38/480 (7%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +NIL  KG+  EA  I + +      P   TYT+L+    R        ++  ++ KDG 
Sbjct: 209 INILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGC 268

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+S+ ++ +IN     G ++EAM + ++M   G +PT  TY   +    + G   E+++
Sbjct: 269 DPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVE 328

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL---- 176
           LL  M + +   PN +T+  L+         E A  + +KM+A G+ P  VTYN L    
Sbjct: 329 LLGKMKK-RGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL 387

Query: 177 -------------------------------ARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                                           + +   G+  +A  +  +M      PN 
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNV 447

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   ++ GYCK+GN+ +AMR L  MK   + P+   +  LI GF      +        
Sbjct: 448 ITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M E G+ P+ VT++ I+D + +   +     +F  MV++G  P    ++++  G+ +   
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +AE+    M K G+ PNV+ +T+ I G C   +   A  I+ +M +    PNL TY +
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS 627

Query: 386 LLWGYGEAKQPWRAE--ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           L++G  +  +   AE   LL  +   G  P   T   +       G   EA +++ S ++
Sbjct: 628 LIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQK 687



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 211/434 (48%), Gaps = 8/434 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G RP+L+T+ T++  L ++ R +    ++S + +    P++  + ++I     + N
Sbjct: 193 MLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHN 252

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D A  +F +M   GC P + TY+TLI G  + G+ EE++ +L+ M Q K ++P   TY 
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQ-KGIEPTVYTYT 311

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           I + + C      EA  ++ KM   G  P+  T+  L    ++ G+   A  +  +M  +
Sbjct: 312 IPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD 371

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            + P   T   +++  C EG  E A      M      P+   +N +IK F  + D   +
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGD---I 428

Query: 260 DKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
            KA+ + ++    G  P+V+T++T++  +   G +     + + M   G++PD   ++ L
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G+ R G+ + A S+   M ++G+ PN V +T +I G+ N  K+  A++++ KM E G 
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            P+ +TY  ++ G+ +      AE     M ++G+ P   T     D     G    A +
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608

Query: 437 VLKSAEEDRQSMPN 450
           +    E+ R   PN
Sbjct: 609 IFHEMEK-RNYFPN 621



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 206/443 (46%), Gaps = 38/443 (8%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA  +   + + G  P + T+T L++ L+R  +F+  + L  K+  DG+ P 
Sbjct: 317 LCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPT 376

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ +NA+IN     G  + A  IF+ M   G  P+T TYN +IK +  +G  ++++ +  
Sbjct: 377 TVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFD 436

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +  +  PN  TYN L+  +C + ++  A  ++  M  +G++PDA TY  L   +++ 
Sbjct: 437 KMLKAGS-SPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG 495

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A  + + M  + + PN  T   I+ GY     ++DA+   ++M E    P+   +
Sbjct: 496 GKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTY 555

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N +I GF         +     M + G+ P+V+T+++ +D     G  G   +IF +M K
Sbjct: 556 NVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEK 615

Query: 304 -------------------------------------AGIEPDIHVFSILAKGYVRAGEP 326
                                                 G EP++  ++ L KG    G  
Sbjct: 616 RNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRC 675

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +A+ ++ SM+K G+ P+  ++  ++ G C  +K++ A++I+  M  +G   +L  Y+ L
Sbjct: 676 YEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKAL 735

Query: 387 LWGYGEAKQPWRAEELLQVMEEK 409
           +    +      A+ + Q M EK
Sbjct: 736 ICALCKENFIEEAQCIFQTMLEK 758



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 186/408 (45%), Gaps = 1/408 (0%)

Query: 28  TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIF 87
           TL ++TTL+  L +         +  K+   G++P  + FN MIN   + G V EA  I 
Sbjct: 166 TLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIM 225

Query: 88  QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
             +      P   TY +LI G+      + +  +   M +D    PN  TY+ L+   CS
Sbjct: 226 SHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKD-GCDPNSVTYSTLINGLCS 284

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
           +  +EEA +++ +MV  GI+P   TY     +    G +  A ++L +M+     PN +T
Sbjct: 285 EGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQT 344

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
              ++SG  ++G  E A+   ++M    + P  V +N+LI         +        M 
Sbjct: 345 FTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWML 404

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
             G  P   T++ I+  +   G + K   IFD M+KAG  P++  ++ L  GY + G   
Sbjct: 405 SHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLN 464

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            A  +L  M+  G+ P+   +T +ISG+    K++ A S++  M E GI+PN  TY  ++
Sbjct: 465 NAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAII 524

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
            GY    +   A  L   M E G  P   T  ++   +       EA+
Sbjct: 525 DGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 194/433 (44%), Gaps = 3/433 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+   A  IF  ++  G  P+  TY  ++         +  + +  K+ K G 
Sbjct: 384 INQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGS 443

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I +N +I    + GN++ AM++ + MK +G KP   TY  LI G+   GK E +  
Sbjct: 444 SPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATS 503

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M  +  + PN  TY  ++  + +   +++A  + +KMV SG  P + TYN +   +
Sbjct: 504 LFYGM-MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGF 562

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++      AE    +M    + PN  T    + G C+ G    A +  + M++    PNL
Sbjct: 563 SKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNL 622

Query: 241 VVFNSLIKGFLDIKDSDGVD--KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
             ++SLI G      ++  +    L  +  +G +P+V T++T++      G   +  ++ 
Sbjct: 623 YTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLV 682

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
             M K G++P   ++  L  G  +  + + A +I  SM   G   ++  +  +I   C  
Sbjct: 683 VSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKE 742

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
             ++ A  I++ M E   N +   +  LL G  +  +     +LL VME +       T 
Sbjct: 743 NFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802

Query: 419 QLVADSWRAIGLA 431
            ++A    A+  A
Sbjct: 803 VMLARELSALDCA 815



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 101/205 (49%), Gaps = 5/205 (2%)

Query: 259 VDKALTLMEEFGVKPD----VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           V +    + E   K D    + +F+T++       ++   ++++  M+ +GI P +  F+
Sbjct: 147 VKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFN 206

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            +     + G  Q+A+ I++ + +Y  +PN   +T++I G C    +  A +++++M + 
Sbjct: 207 TMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKD 266

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G +PN  TY TL+ G     +   A ++L+ M +KG+ P   T  +   S    G + EA
Sbjct: 267 GCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEA 326

Query: 435 KRVLKSAEEDRQSMPNKKDEIAVES 459
             +L   ++ R  +PN +   A+ S
Sbjct: 327 VELLGKMKK-RGCVPNIQTFTALIS 350


>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 484

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 191/363 (52%), Gaps = 2/363 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P L TY  L+ +     R     + +  V K G + D+I F  ++          +AM I
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 87  -FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK-NVKPNDRTYNILVRA 144
             ++M   GC P   +YN L+KG  +  + +E+L+LLQ+M  D  +  P+  +Y  ++  
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +  +  +++A+   ++M+  GI P+ VTY+++  A  +     +A ++L  M  N V PN
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
            RT   IV GYC  G  ++A+ FL +M    V P++V +NSL+             K   
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M + G+KP++ T+ T++  +++ G + +   + D MV+ GI P+ +VFSIL   Y + G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           +  +A  + + MR+ G++P+ V + TVI   C + +++ AM  +E+M +  ++P    Y 
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 385 TLL 387
           +L+
Sbjct: 449 SLI 451



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 144/311 (46%), Gaps = 3/311 (0%)

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA- 189
           V PN  TY IL+ + C    ++  +  +  ++  G + DA+ +  L +       T  A 
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE--LEVHPNLVVFNSLI 247
           + +L  M      PN  +  I++ G C E   ++A+  L  M +   +  P++V + ++I
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            GF    D D        M + G+ P+VVT+S+I+ A   A  M K  E+   MVK G+ 
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P+   ++ +  GY  +G+P++A   L  M   GV P+VV + +++   C   +   A  +
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           ++ M + G+ P + TY TLL GY           LL +M   G+ P      ++  ++  
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 428 IGLAREAKRVL 438
            G   +A  V 
Sbjct: 387 QGKVDQAMLVF 397



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 138/247 (55%), Gaps = 1/247 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   +A+  ++ +++ G  P ++TY++++AAL + +     + +++ + K+G+
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   +N++++    SG   EA+   +KM   G +P   TYN+L+      G+  E+ K
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M++ + +KP   TY  L++ + +K ++ E   ++  MV +GI P+   ++ L  AY
Sbjct: 326 MFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+ G+  +A  +  +M+   + P+  T G ++   CK G +EDAMR+  +M +  + P  
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444

Query: 241 VVFNSLI 247
           +V+NSLI
Sbjct: 445 IVYNSLI 451



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/437 (21%), Positives = 189/437 (43%), Gaps = 79/437 (18%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSI--LSLISKVEKDGMKPDSILFNA 69
           +A ++F+ L+  G   ++      +A + R     ++   + +++   D + P+   +  
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGI 96

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL-LQLMSQD 128
           +I +C  +G +D        +   G +     +  L+KG     +  +++ + L+ M+Q 
Sbjct: 97  LIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQL 156

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG--IQPDAVTYNTLARAYAQYGET 186
             + PN  +YNIL++  C +N  +EA  ++  M   G    PD V+Y T           
Sbjct: 157 GCI-PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTT----------- 204

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
                                   +++G+ KEG+++ A    + M +  + PN+V ++S+
Sbjct: 205 ------------------------VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI 240

Query: 247 IKGFLDIKDSDGVDKALTL-----------------------------------MEEFGV 271
           I      +  D   + LT                                    M   GV
Sbjct: 241 IAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGV 300

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           +PDVVT++++MD     G   + +++FD M K G++P+I  +  L +GY   G   +   
Sbjct: 301 EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 360

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +L  M + G+HPN  +F+ +I  +    K+ +AM ++ KM + G+NP+  TY T++   G
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI---G 417

Query: 392 EAKQPWRAEELLQVMEE 408
              +  R E+ ++  E+
Sbjct: 418 ILCKSGRVEDAMRYFEQ 434



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 83/156 (53%), Gaps = 5/156 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   G+  EA  +F+ + + G +P + TY TL+     +     +  L+  + ++G+
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+  +F+ +I A ++ G VD+AM +F KM+  G  P T TY T+I      G+ E++++
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWN 156
             + M  D+ + P +  YN L+ + C    I + W+
Sbjct: 431 YFEQMI-DERLSPGNIVYNSLIHSLC----IFDKWD 461



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 36/219 (16%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +   +++ G  P   TY ++V       + K  +  + K+  DG++PD + +N+++
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   ++G   EA K+F  M   G KP  +TY TL++GY   G   E   LL LM ++  +
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GI 370

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAV-------------------- 171
            PN   ++IL+ A+  +  +++A  V  KM   G+ PD V                    
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 172 ---------------TYNTLARAYAQYGETYRAEQMLFE 195
                           YN+L  +   + +  +A+    +
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKDYFLK 469



 Score = 40.0 bits (92), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 19/83 (22%), Positives = 44/83 (53%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  +A  +F+ + ++G  P  +TY T++  L +  R +  +    ++  + + P +I+
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV 446

Query: 67  FNAMINACSESGNVDEAMKIFQK 89
           +N++I++       D+A   F K
Sbjct: 447 YNSLIHSLCIFDKWDKAKDYFLK 469


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 199/410 (48%), Gaps = 4/410 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   GK   AH +   + E   RP+  TY TL++ L +Q+      +L+ +    G 
Sbjct: 52  MDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGF 111

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + ++ + +   + G +DEA ++ ++M  +GC P   TYNTLI G     K E++ +
Sbjct: 112 VPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYE 171

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ +     V P+  TY I+V   C +  +++A  +V  M+  G  P  +TY  L    
Sbjct: 172 LLETLVSSGFV-PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGL 230

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A  +  EM +     +      +V+GYCK    ++A + +  ++     P +
Sbjct: 231 CRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYI 287

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            V+N+L+ G+      D +      M   G  P++ T++ +MD     G + +     + 
Sbjct: 288 DVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLES 347

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M  AG  PD+  ++I+  G  +A +P++A  +L  M + G+ P+ V + T+++ +C   +
Sbjct: 348 MHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 407

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
              A+ I + M + G++P+  TY TL+ G  +  +   A EL+  M   G
Sbjct: 408 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNG 457



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 204/423 (48%), Gaps = 33/423 (7%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P + TY  L+  L +  +      ++ ++   G+ PD++ FN++++   ++G  + A  +
Sbjct: 8   PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
              M +  C+P+  TYNTLI G       + +  L+        V P+  TY+IL    C
Sbjct: 68  LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFV-PDVVTYSILADGLC 126

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            +  I+EA+ +V +M  +G  P+ VTYNTL     +  +T +A ++L  + ++   P+  
Sbjct: 127 KRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVV 186

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG-------------FLDI 253
           T  IIV G CKEG ++ A++ +  M +    P+++ + +L++G             F ++
Sbjct: 187 TYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM 246

Query: 254 KDSDGVDKAL---TLMEEF--------------GVK--PDVVTFSTIMDAWSSAGLMGKC 294
              D    AL   +L+  +              G++  P +  ++ +MD +   G + + 
Sbjct: 247 VSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEI 306

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
             +F+DM   G  P+I  ++I+  G  + G+  +A   L SM   G  P+VV +  +I G
Sbjct: 307 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 366

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
              A K + A  + ++M + GI P+  TY TL+  + + ++   A  +L+ M + GV P 
Sbjct: 367 LFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPD 426

Query: 415 KST 417
             T
Sbjct: 427 NVT 429



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 209/436 (47%), Gaps = 17/436 (3%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P +  Y  L+    ++ R   I ++   +   G  P+   +N +++   + G VDEA   
Sbjct: 285 PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPF 344

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            + M  +GC P   +YN +I G     KP+E+ ++L  M Q   + P+  TYN L+  +C
Sbjct: 345 LESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQ-AGIPPDAVTYNTLMAQFC 403

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM-QNNQVRPNE 205
            +   ++A  ++  M+ +G+ PD VTYNTL    +Q      A +++ EM +N  V    
Sbjct: 404 KEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSAC 463

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG-VDKALT 264
            T   I+   CKEG ++ A+  +  M    V  N V +N     F+D    +G +D+A +
Sbjct: 464 TTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNI----FIDRLCKEGRLDEASS 519

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA-GIEPDIHVFSILAKGYVRA 323
           L+ E     D V+++T++     A  + +  ++  +MV   G+    H F++L   + + 
Sbjct: 520 LLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKT 579

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
               +A ++L  M + G  P+V+ +  VI+  C   K+ +A  ++++M   GI  +  +Y
Sbjct: 580 KRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSY 639

Query: 384 ETLLWGY-GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
             L++G  G+     R +E LQV+EE       S  ++     R + LA   +   + A 
Sbjct: 640 TVLIYGLCGQG----RGKEALQVLEEMA----SSDCEIDDLKCRKLYLALRGQGRGEEAA 691

Query: 443 EDRQSMPNKKDEIAVE 458
           E  + M  K D ++++
Sbjct: 692 ELLRRMTTKMDSLSLD 707



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 172/382 (45%), Gaps = 45/382 (11%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           PD   +N +I+   ++   D+A ++  +M D G  P T T+N+++ G    GK E +  L
Sbjct: 8   PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           L +M++ +N +P+  TYN L+   C + +++ A  +V + V+SG  PD VTY+       
Sbjct: 68  LAVMAE-RNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYS------- 119

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
                                       I+  G CK G +++A   +  M      PNLV
Sbjct: 120 ----------------------------ILADGLCKRGRIDEAFELVKEMSGNGCTPNLV 151

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            +N+LI G      ++   + L  +   G  PDVVT++ I+D     G + K  ++ + M
Sbjct: 152 TYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGM 211

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           +K G  P +  ++ L +G  R G   +A  I   M       + + + ++++G+C + + 
Sbjct: 212 LKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRT 271

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE---KGVRPKKSTI 418
           + A  + +    I   P +  Y  L+ GY    +  R +E+  V E+   +G  P   T 
Sbjct: 272 KEAQKVVDG---IRGTPYIDVYNALMDGYC---KEGRLDEIPNVFEDMACRGCVPNIKTY 325

Query: 419 QLVADSWRAIGLAREAKRVLKS 440
            +V D     G   EA   L+S
Sbjct: 326 NIVMDGLCKHGKVDEAFPFLES 347



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 143/280 (51%), Gaps = 6/280 (2%)

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           ++ V P+  TYNIL+   C  +  ++A  ++++MV  G+ PD VT+N++     + G+  
Sbjct: 3   ERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFE 62

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           RA  +L  M     RP+  T   ++SG CK+ N++ A   +         P++V ++ L 
Sbjct: 63  RAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILA 122

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            G         +D+A  L++E    G  P++VT++T++D    A    K  E+ + +V +
Sbjct: 123 DGLC---KRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSS 179

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G  PD+  ++I+  G  + G   KA  ++  M K G  P+V+ +T ++ G C   ++  A
Sbjct: 180 GFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEA 239

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
             I+++M       +   Y +L+ GY ++ +   A++++ 
Sbjct: 240 HHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD 279



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 133/276 (48%), Gaps = 6/276 (2%)

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           + PD  TYN L     +  +T +A +ML EM +  V P+  T   I+ G CK G  E A 
Sbjct: 6   VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 65

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIM 282
             L  M E    P+   +N+LI G    ++   VD+A TL++EF   G  PDVVT+S + 
Sbjct: 66  SLLAVMAERNCRPSCCTYNTLISGLCKQQN---VDRAKTLVDEFVSSGFVPDVVTYSILA 122

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
           D     G + +  E+  +M   G  P++  ++ L  G  +A + +KA  +L ++   G  
Sbjct: 123 DGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFV 182

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           P+VV +T ++ G C   ++ +A+ + E M + G  P++ TY  L+ G     +   A  +
Sbjct: 183 PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHI 242

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            + M  K           + + +      +EA++V+
Sbjct: 243 FKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVV 278



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 157/342 (45%), Gaps = 14/342 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   GK  EA      +   G  P +++Y  ++  L +  + K    ++ ++ + G+
Sbjct: 329 MDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGI 388

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD++ +N ++    +    D+A+ I + M  +G  P   TYNTLI G     +  ++ +
Sbjct: 389 PPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYE 448

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L+  M ++  V     TYN ++   C +  +++A  ++  M   G++ + VTYN      
Sbjct: 449 LMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRL 508

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM---KELEVH 237
            + G    A  +L EM   +   +E +   ++ G CK   ++ A +    M   K L + 
Sbjct: 509 CKEGRLDEASSLLSEMDTLR---DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCIT 565

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLME---EFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            +   FN LI  F   K    +D+ALTL+E   + G  P V+T++ ++        + K 
Sbjct: 566 SH--TFNLLIDAFTKTKR---LDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKA 620

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
            E+FD+M   GI      +++L  G    G  ++A  +L  M
Sbjct: 621 WELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 662



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 5/229 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G   +A  + + +   G     +TY   +  L ++ R     SL+S  E D ++ D
Sbjct: 473 LCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLS--EMDTLR-D 529

Query: 64  SILFNAMINACSESGNVDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
            + +  +I    ++  +D A K+ ++M    G   T+ T+N LI  +    + +E+L LL
Sbjct: 530 EVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLL 589

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           +LM Q +   P+  TYN+++   C  + +++AW +  +M   GI   +V+Y  L      
Sbjct: 590 ELMVQ-RGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCG 648

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
            G    A Q+L EM ++    ++  C  +      +G  E+A   L RM
Sbjct: 649 QGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRM 697



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 25/115 (21%), Positives = 52/115 (45%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +   +++ G  P++ITY  ++  L +  +      L  ++   G+   S+ +  +I
Sbjct: 584 EALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLI 643

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
                 G   EA+++ ++M  S C+        L       G+ EE+ +LL+ M+
Sbjct: 644 YGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMT 698


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 205/446 (45%), Gaps = 21/446 (4%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P + T   L+ +     R     S+++K+ K G +PD+  F  +I      G + EA
Sbjct: 91  GIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEA 150

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +F KM   G +P   TY TLI G   VG    +++LL  M Q KN +PN   YN ++ 
Sbjct: 151 LHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ-KNCQPNVFAYNTIID 209

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C    + EA+N+  +MV  GI PD  TYN+L  A     E      +L EM ++++ P
Sbjct: 210 SLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMP 269

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  +   +V   CKEG + +A   + +M +  V PN+V + +L+ G   + + D   K  
Sbjct: 270 DVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVF 329

Query: 264 TLMEEFGVKPDVVTFST-------------------IMDAWSSAGLMGKCQEIFDDMVKA 304
             M   G  P+V++++T                   +MD       M +  ++FD MV  
Sbjct: 330 DTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCK 389

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G  P++  ++ L  GY +     KA  +   M +  + P+ V ++T+I G C+  ++Q A
Sbjct: 390 GCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDA 449

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           ++++ +M      PNL TY  LL    + +    A  LL+ +E   + P      +  D 
Sbjct: 450 IALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDG 509

Query: 425 WRAIGLAREAKRVLKSAEEDRQSMPN 450
               G   EA R L S    +   P+
Sbjct: 510 MCRAG-ELEAARDLFSNLSSKGLQPD 534



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 225/492 (45%), Gaps = 61/492 (12%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  EA ++F+ +I EG RP ++TY TL+  L +     + + L+  + +   +P+   
Sbjct: 144 EGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFA 203

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I++  +   V EA  +F +M   G  P   TYN+LI    N+ + +    LL  M 
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 263

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            D  + P+  ++N +V A C +  + EA +VV KM+  G++P+ VTY  L   +    E 
Sbjct: 264 -DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEM 322

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEG-------------------NMEDAMRF 227
             A ++   M      PN  +   +++GYCK                     NM++A++ 
Sbjct: 323 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKV 382

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG---VKPDVVTFSTIM-- 282
              M      PN++ +N+LI G+  I+    +DKA+ L  E     + PD VT+ST++  
Sbjct: 383 FDTMVCKGCMPNVISYNTLINGYCKIQR---IDKAMYLFGEMCRQELIPDTVTYSTLIHG 439

Query: 283 --------DAWSSAGLMGKCQEI---------FDDMVK----------------AGIEPD 309
                   DA +    M  C +I          D + K                + ++PD
Sbjct: 440 LCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPD 499

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
           I V +I   G  RAGE + A  + +++   G+ P+V  ++ +I+G C    +  A  ++ 
Sbjct: 500 IQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFR 559

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           +M E G   N   Y T+  G+    +  RA +LLQ M  +G     ST+ L        G
Sbjct: 560 EMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 619

Query: 430 LAREAKRVLKSA 441
           L +  K++L++ 
Sbjct: 620 LDQSLKQILRNG 631



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 184/420 (43%), Gaps = 55/420 (13%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           FN ++     P+ + +  L+ ++ + K   ++LSL  +++  G+ P+    + +IN+   
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
              V  A  +  K+   G +P T+T+ T                                
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTT-------------------------------- 136

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
               L+R  C +  I EA ++  KM+  G +PD VTY TL     + G T  A ++L  M
Sbjct: 137 ----LIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSM 192

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
                +PN      I+   CK+  + +A      M    + P++  +NSLI    ++ + 
Sbjct: 193 VQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEW 252

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
             V   L  M +  + PDVV+F+T++DA    G + +  ++ D M++ G+EP++  ++ L
Sbjct: 253 KHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTAL 312

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA------------------ 358
             G+    E  +A  +  +M   G  PNV+ + T+I+G+C                    
Sbjct: 313 MDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCC 372

Query: 359 -VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            + M  A+ +++ M   G  PN+ +Y TL+ GY + ++  +A  L   M  + + P   T
Sbjct: 373 YLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVT 432



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/349 (22%), Positives = 148/349 (42%), Gaps = 20/349 (5%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EAH + + +I+ G  P ++TYT L+            + +   +   G  P+
Sbjct: 281 LCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPN 340

Query: 64  SILFNAMINACSESG-------------------NVDEAMKIFQKMKDSGCKPTTSTYNT 104
            I +N +IN   +                     N+DEA+K+F  M   GC P   +YNT
Sbjct: 341 VISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNT 400

Query: 105 LIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS 164
           LI GY  + + ++++ L   M + + + P+  TY+ L+   C    +++A  + ++MVA 
Sbjct: 401 LINGYCKIQRIDKAMYLFGEMCRQELI-PDTVTYSTLIHGLCHVERLQDAIALFHEMVAC 459

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
              P+ VTY  L     +      A  +L  ++ + + P+ +   I + G C+ G +E A
Sbjct: 460 SQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAA 519

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
                 +    + P++  ++ +I G       D   K    M+E G   +   ++TI   
Sbjct: 520 RDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRG 579

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           +       +  ++  +MV  G   D    ++  K     G  Q  + IL
Sbjct: 580 FLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQIL 628



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 128/303 (42%), Gaps = 41/303 (13%)

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
           N+I+ A +   +M+     P  V +N L  + A+         +  +M +  + PN  T 
Sbjct: 40  NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
            I+++ +C    +  A   L ++ +L   P+   F +LI+G   I     + +AL L ++
Sbjct: 100 HILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRG---ICVEGKIGEALHLFDK 156

Query: 269 F---GVKPDVVTFSTIMDAWSSAG-------LMG-----KCQ------------------ 295
               G +PDVVT+ T+++     G       L+G      CQ                  
Sbjct: 157 MIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQ 216

Query: 296 -----EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
                 +F +MV  GI PDI  ++ L        E +   ++L  M    + P+VV F T
Sbjct: 217 VTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNT 276

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           V+   C   K+  A  + +KM + G+ PN+ TY  L+ G+    +   A ++   M  KG
Sbjct: 277 VVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKG 336

Query: 411 VRP 413
             P
Sbjct: 337 CMP 339



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 70/168 (41%)

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           DG   +   M      P  V F+ ++ + +          +   M   GI P+I+   IL
Sbjct: 43  DGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHIL 102

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
              +        A S+L  + K G  P+   FTT+I G C   K+  A+ +++KM   G 
Sbjct: 103 INSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGF 162

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
            P++ TY TL+ G  +      A  LL  M +K  +P       + DS
Sbjct: 163 RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDS 210


>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
 gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
          Length = 901

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 222/430 (51%), Gaps = 36/430 (8%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           I Y+ ++ A  +    +    L+ ++E+DG+     ++++M++  +   N ++ + +F++
Sbjct: 370 IIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFER 429

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           +K+ G KP+  +Y  L+  Y  +GK  ++L + + M +   +K N++TY++L+  +   +
Sbjct: 430 LKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEM-ESCGIKHNNKTYSMLINGFIHLH 488

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
               A+ +  +M+ SG+QPD   YN L  A+ + G   RA  +L +MQ  +++P+ R   
Sbjct: 489 DFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFR 548

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            I+ GY   G+M+ A+  L  M+     P ++ +N+LI G +           L  M   
Sbjct: 549 PIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIA 608

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH------------------ 311
           G+ P+  T++ IM  ++++G +GK  E F  + ++G++ D++                  
Sbjct: 609 GITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSA 668

Query: 312 -----------------VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
                            +++IL  G+ R G+  +AE ++  M++ GV PN+  +T+ I+ 
Sbjct: 669 LAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINA 728

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C A  MQRA  + E+M ++G+ PN+KTY TL+ G+     P RA +  + M+  G++P 
Sbjct: 729 CCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPD 788

Query: 415 KSTIQLVADS 424
           +++   +  S
Sbjct: 789 EASYHCLVTS 798



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 192/388 (49%), Gaps = 7/388 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+ V  GK  +A  I   +   G +    TY+ L+        F +  ++  ++ + G+
Sbjct: 446 LNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGL 505

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD  ++N +I A  + GN+D A+ I +KM+    +P+   +  +I+GY   G  + +L 
Sbjct: 506 QPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALD 565

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L LM +   V P   TYN L+     K+ ++ A +V+ KM  +GI P+  TY  + R Y
Sbjct: 566 TLDLMRRSGCV-PTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGY 624

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A  G+  +A +   +++ + ++ +      ++   CK G M+ A+     M   ++  N 
Sbjct: 625 AASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNT 684

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            ++N LI G+    D    +  +  M+E GV P++ T+++ ++A   AG M + +++ ++
Sbjct: 685 FIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEE 744

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV  G++P++  ++ L KG+ R   P +A      M+  G+ P+   +  +++   +   
Sbjct: 745 MVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRAT 804

Query: 361 MQRA------MSIYEKMCEIGINPNLKT 382
           +         +S+  +M E  +  +L+T
Sbjct: 805 VMEGSTYTGIISVCREMSENDLTVDLRT 832



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/451 (21%), Positives = 199/451 (44%), Gaps = 71/451 (15%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G++P++ +F ++++A + + ++  A+   ++MK  G + T  TY+ LI G+  +   + +
Sbjct: 294 GIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSA 353

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGI------------ 166
             L +  ++ K    N   Y+ ++ A C   ++E A  +V +M   GI            
Sbjct: 354 DNLFK-EAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMH 412

Query: 167 -----------------------QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
                                  +P  ++Y  L   Y + G+  +A  +  EM++  ++ 
Sbjct: 413 GYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKH 472

Query: 204 NERTCGIIVSG-----------------------------------YCKEGNMEDAMRFL 228
           N +T  ++++G                                   +CK GNM+ A+  L
Sbjct: 473 NNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICIL 532

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
            +M++  + P+   F  +I+G+    D       L LM   G  P V+T++ ++      
Sbjct: 533 EKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRK 592

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
             + +   + D M  AGI P+ H ++I+ +GY  +G+  KA    T +++ G+  +V ++
Sbjct: 593 HKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIY 652

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
            T++   C + +MQ A+++  +M    I  N   Y  L+ G+      W AE+L++ M+E
Sbjct: 653 ETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKE 712

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            GV P   T     ++    G  + A++V++
Sbjct: 713 DGVPPNIHTYTSYINACCKAGDMQRAEKVIE 743



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 158/344 (45%), Gaps = 46/344 (13%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  IF  ++  G +P    Y  L+ A  +       + ++ K++K+ M+P +  F  +I 
Sbjct: 493 AFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIE 552

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
             + +G++  A+     M+ SGC PT  TYN LI G     K + ++ +L  MS    + 
Sbjct: 553 GYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSI-AGIT 611

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA------------- 179
           PN+ TY I++R + +   I +A+    K+  SG++ D   Y TL RA             
Sbjct: 612 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 671

Query: 180 ----------------------YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
                                 +A+ G+ + AE ++ +M+ + V PN  T    ++  CK
Sbjct: 672 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCK 731

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
            G+M+ A + +  M ++ + PN+  + +LIKG+  +   D   K    M+  G+KPD  +
Sbjct: 732 AGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEAS 791

Query: 278 F----------STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
           +          +T+M+  +  G++  C+E+ ++ +   +   +H
Sbjct: 792 YHCLVTSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAVH 835



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 149/318 (46%), Gaps = 1/318 (0%)

Query: 96  KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
           KP+   +  +I  Y   G    +    + M + + ++PN   +  LV A+     +  A 
Sbjct: 261 KPSRREFGLMIVYYAKRGDKHHARATFENM-RARGIEPNAFVFTSLVHAYAVARDMRGAL 319

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
           + V +M + G++   VTY+ L   +A+  ++  A+ +  E +      N      I+  +
Sbjct: 320 SCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAH 379

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C+ GNME A   +  M+E  +   + V++S++ G+  I++ +        ++E G KP +
Sbjct: 380 CQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSI 439

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           +++  +++ +   G + K   I  +M   GI+ +   +S+L  G++   +   A +I   
Sbjct: 440 ISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEE 499

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M + G+ P+  ++  +I  +C    M RA+ I EKM +  + P+ + +  ++ GY  A  
Sbjct: 500 MLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGD 559

Query: 396 PWRAEELLQVMEEKGVRP 413
              A + L +M   G  P
Sbjct: 560 MKSALDTLDLMRRSGCVP 577



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/297 (21%), Positives = 130/297 (43%)

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
           W  V        +P    +  +   YA+ G+ + A      M+   + PN      +V  
Sbjct: 249 WQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHA 308

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           Y    +M  A+  +  MK   +   +V ++ LI GF  I DS   D      +      +
Sbjct: 309 YAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLN 368

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
            + +S I+ A   +G M + +E+  +M + GI+  I V+  +  GY       K   +  
Sbjct: 369 GIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFE 428

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            +++ G  P+++ +  +++ +    K+ +A+SI ++M   GI  N KTY  L+ G+    
Sbjct: 429 RLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLH 488

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
               A  + + M   G++P ++   L+ +++  +G    A  +L+  +++R    N+
Sbjct: 489 DFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNR 545


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 224/439 (51%), Gaps = 5/439 (1%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K +EA  +F  +I+    P+LI ++ L +A+ R+K +  +L    +++ +G++ +    N
Sbjct: 49  KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            MIN       +  A  +  +    G +P T T++TLI G+   G+  E++ L+  M + 
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K  +PN  T N L+   C K  + EA  ++ +MV  G + + +TY  +     + G T  
Sbjct: 169 K-YRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTAL 227

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  +  +M+   ++ +     I++   CK+GN++DA+     M+   +  ++V ++S+I 
Sbjct: 228 ALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIG 287

Query: 249 GFLDIKDSDGVDKALTLMEEFG--VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           G  +  D    D A  L E  G  + P+VVTFS ++D +   G + + +E++++MV  GI
Sbjct: 288 GLCN--DGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGI 345

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD   +S L  G+ +     +A  +L  M   G  PN+V ++ +I+ +C A ++   M 
Sbjct: 346 APDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMR 405

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           ++ ++   G+  +  TY TL+ G+ ++ +   A+EL Q M  +GV P   T  ++ D   
Sbjct: 406 LFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLC 465

Query: 427 AIGLAREAKRVLKSAEEDR 445
             G  ++A  + +  ++ R
Sbjct: 466 DNGELQKALEIFEKMQKSR 484



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 215/425 (50%), Gaps = 7/425 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  KG+  EA  + + +++ G     ITY  ++  + +       L L  K+E+  +
Sbjct: 181 INGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSI 240

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K   + ++ +I++  + GN+D+A+ +F +M+  G K     Y+++I G  N G+ ++  K
Sbjct: 241 KASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAK 300

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+ M   +N+ PN  T++ L+  +  +  + EA  +  +MVA GI PD +TY++L   +
Sbjct: 301 MLREMI-GRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGF 359

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A QML  M +    PN  T  I+++ YCK   +++ MR    +    +  + 
Sbjct: 360 CKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADT 419

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +N+L++GF     S  ++ A  L +E    GV P VVT+  ++D     G + K  EI
Sbjct: 420 VTYNTLVQGFC---QSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEI 476

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F+ M K+ +   I +++I+  G   A +   A S+  S+   GV P+V+ +  +I G C 
Sbjct: 477 FEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCK 536

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              +  A  ++ KM E G  P+  TY  L+  +        + EL++ M+ +G     ST
Sbjct: 537 KGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADAST 596

Query: 418 IQLVA 422
           I++V 
Sbjct: 597 IKMVV 601



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 205/415 (49%), Gaps = 1/415 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  EA  + + ++E  +RP ++T  TL+  L  + R    L LI ++ K G + + I 
Sbjct: 152 EGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEIT 211

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +  ++N   +SGN   A+ +F+KM++   K +   Y+ +I      G  +++L L   M 
Sbjct: 212 YGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEME 271

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K +K +   Y+ ++   C+    ++   ++ +M+   I P+ VT++ L   + + G+ 
Sbjct: 272 M-KGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKL 330

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+++  EM    + P+  T   ++ G+CKE  + +A + L  M      PN+V ++ L
Sbjct: 331 LEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSIL 390

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I  +   K  D   +    +   G+  D VT++T++  +  +G +   +E+F +MV  G+
Sbjct: 391 INSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGV 450

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P +  + IL  G    GE QKA  I   M+K  +   + ++  +I G CNA K+  A S
Sbjct: 451 PPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWS 510

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           ++  +   G+ P++ TY  ++ G  +      A+ L + M+E G  P   T  ++
Sbjct: 511 LFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNIL 565



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/448 (23%), Positives = 214/448 (47%), Gaps = 5/448 (1%)

Query: 1   MNILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
           MNI++     K K   A  +    ++ G  P  IT++TL+     + R    ++L+ ++ 
Sbjct: 107 MNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMV 166

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           +   +P+ +  N +IN     G V EA+ +  +M   GC+    TY  ++      G   
Sbjct: 167 EMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTA 226

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
            +L L + M +++++K +   Y+I++ + C   ++++A ++  +M   GI+ D V Y+++
Sbjct: 227 LALDLFRKM-EERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSI 285

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
                  G      +ML EM    + PN  T   ++  + KEG + +A      M    +
Sbjct: 286 IGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGI 345

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P+ + ++SLI GF         ++ L LM   G +P++VT+S +++++  A  +     
Sbjct: 346 APDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMR 405

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F ++   G+  D   ++ L +G+ ++G+   A+ +   M   GV P+VV +  ++ G C
Sbjct: 406 LFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLC 465

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
           +  ++Q+A+ I+EKM +  +   +  Y  ++ G   A +   A  L   +  KGV+P   
Sbjct: 466 DNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVL 525

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEED 444
           T  ++       G   EA  + +  +ED
Sbjct: 526 TYNVMIGGLCKKGSLSEADMLFRKMKED 553



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 127/283 (44%), Gaps = 18/283 (6%)

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG----LMGKCQEIFDDMVKA 304
           G +DIK ++ +D   ++++   + P ++ FS +  A +       ++G C+E    M   
Sbjct: 44  GIVDIKVNEAIDLFESMIQSRPL-PSLIDFSKLFSAVARRKEYDLVLGFCKE----MDLN 98

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           GIE +++  +I+   + R  +   A S++    K+G  PN + F+T+I+G+C   ++  A
Sbjct: 99  GIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEA 158

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           +++ ++M E+   PN+ T  TL+ G     +   A  L+  M + G    + T   V + 
Sbjct: 159 VALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNR 218

Query: 425 WRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSEH 484
               G    A  + +  EE        +  I ++S+ +  NL  + S F ++      E 
Sbjct: 219 MCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEM------EM 272

Query: 485 NGSSAAKIR-SQIV--LRSDTVWTATKSLFVNTYGSGVQPMVV 524
            G  A  +  S I+  L +D  W     +     G  + P VV
Sbjct: 273 KGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVV 315


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 212/408 (51%), Gaps = 1/408 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  KG+  +A +  + L+ +G +   ++Y TL+  + +    +  + L+ K++    KP+
Sbjct: 139 LCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPN 198

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             +++ +I+A  +   V EA  +F +M   G      TY+TLI G+   GK +E++ LL 
Sbjct: 199 VEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLN 258

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K + PN  TYNILV A C +  ++EA +V+  M+ + ++PD +TY+TL   Y   
Sbjct: 259 EMVL-KTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLV 317

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E  +A+ +   M    V P+  T  I+++G+CK   +++A+     M +  + P +V +
Sbjct: 318 YEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTY 377

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           +SLI G         V   +  M + G   DV+T+S+++D     G + +   +F+ M  
Sbjct: 378 SSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKD 437

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
             I P+I  F+IL  G  + G  + A+ +   +   G H NV  +  +I+G C    ++ 
Sbjct: 438 QEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEE 497

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           A+++  KM + G  PN  T+ET++    +  +  +AE+LL+ M  +G+
Sbjct: 498 ALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 213/431 (49%), Gaps = 8/431 (1%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G +P LIT   L+       +     S+++K+ K G  PD++  N +I      G V +
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKK 147

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+    K+   G +    +Y TLI G   +G    ++KLL+ +   +  KPN   Y+ ++
Sbjct: 148 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKID-GRLTKPNVEMYSTII 206

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
            A C    + EA+ +  +M   GI  D VTY+TL   +   G+   A  +L EM    + 
Sbjct: 207 DALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTIN 266

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL---DIKDSDGV 259
           PN  T  I+V   CKEG +++A   L  M +  V P+++ +++L+ G+    ++K +  V
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
             A++LM   GV PDV T++ +++ +    ++ +   +F +M +  + P I  +S L  G
Sbjct: 327 FNAMSLM---GVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG 383

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             ++G       ++  MR  G   +V+ ++++I G C    + RA++++ KM +  I PN
Sbjct: 384 LCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPN 443

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + T+  LL G  +  +   A+E+ Q +  KG      T  ++ +     GL  EA  +L 
Sbjct: 444 IFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTML- 502

Query: 440 SAEEDRQSMPN 450
           S  ED   +PN
Sbjct: 503 SKMEDNGCIPN 513



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 142/306 (46%)

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           +N ++ ++        A ++ +++   GIQPD +T N L   +   G+      +L ++ 
Sbjct: 62  FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
                P+  T   ++ G C +G ++ A+ F  ++       N V + +LI G   I D+ 
Sbjct: 122 KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTR 181

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
           G  K L  ++    KP+V  +STI+DA     L+ +   +F +M   GI  D+  +S L 
Sbjct: 182 GAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLI 241

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            G+   G+ ++A  +L  M    ++PNV  +  ++   C   K++ A S+   M +  + 
Sbjct: 242 YGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVK 301

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           P++ TY TL+ GY    +  +A+ +   M   GV P   T  ++ + +    +  EA  +
Sbjct: 302 PDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNL 361

Query: 438 LKSAEE 443
            K   +
Sbjct: 362 FKEMHQ 367



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 133/312 (42%), Gaps = 46/312 (14%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NILV     +GK  EA  +   +++   +P +ITY+TL+         K    + + +  
Sbjct: 273 NILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL 332

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+ PD   +  +IN   ++  VDEA+ +F++M      P   TY++LI G         
Sbjct: 333 MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG--------- 383

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
                                       C    I   W+++ +M   G   D +TY++L 
Sbjct: 384 ---------------------------LCKSGRIPYVWDLIDEMRDRGQPADVITYSSLI 416

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               + G   RA  +  +M++ ++RPN  T  I++ G CK G ++DA      +     H
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 476

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            N+  +N +I G         +++ALT+   ME+ G  P+  TF TI+ A        K 
Sbjct: 477 LNVYTYNVMINGHC---KQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKA 533

Query: 295 QEIFDDMVKAGI 306
           +++   M+  G+
Sbjct: 534 EKLLRQMIARGL 545



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 35/254 (13%)

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
           N++DA+    RM  +   P ++ FN ++  F  +K           +E  G++PD++T +
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA---------- 329
            +++ +   G +     +   ++K G  PD    + L KG    G+ +KA          
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 330 ---------ESILTSMRKYG----------------VHPNVVMFTTVISGWCNAVKMQRA 364
                     +++  + K G                  PNV M++T+I   C    +  A
Sbjct: 159 GFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEA 218

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             ++ +M   GI+ ++ TY TL++G+    +   A  LL  M  K + P   T  ++ D+
Sbjct: 219 YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278

Query: 425 WRAIGLAREAKRVL 438
               G  +EAK VL
Sbjct: 279 LCKEGKVKEAKSVL 292


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 205/426 (48%), Gaps = 1/426 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L   G+    +  +N ++  G  P   TY  L+ +L + +RF+   S+   +   G 
Sbjct: 24  LEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGC 83

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   ++ +I        VDEA ++  +M D G +P   TY +L+ G   +GK +E++ 
Sbjct: 84  SPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVD 143

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M   +   P+   YN+L+  +  K  + EA+ +  +M+  G  P   TYN+L   +
Sbjct: 144 LFSRMVY-RGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGF 202

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++ GE  R + +  +M      PN  T   ++ G+CK G+M +A R    M+ L   P++
Sbjct: 203 SRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDV 262

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+L++G           + L  M   GV PD+V+++ ++D +S +G +    ++F +
Sbjct: 263 VSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYE 322

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           + K+G+EPD   +S +     RAG+   A  +   M   G  P+  +   ++ G C   +
Sbjct: 323 IPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGER 382

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  +  +++ M +    P +  Y  L++   +AK+     E+   + E+G  P     ++
Sbjct: 383 LTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKV 442

Query: 421 VADSWR 426
           + ++ R
Sbjct: 443 ILETLR 448



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 175/377 (46%), Gaps = 1/377 (0%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           ++Y  L+  L +  R   +    + +   G  P++  +  ++ +  ++   +EA  +F+ 
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M   GC P   +Y+ LI G     K +E+ +LL  M  D   +PN  TY  L+   C   
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI-DGGHQPNVVTYGSLLSGLCKMG 136

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            ++EA ++  +MV  G  PD V YN L   +++ G+   A ++  EM      P   T  
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            ++SG+ ++G           M      PN+  FN+L+ GF  + D     +    M   
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G  PDVV+++T+M    S G   + Q +  +M+++G+ PDI  ++IL  GY ++G    A
Sbjct: 257 GCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             +   + K G+ P+   ++T+I   C A K+  A  +++ M   G  P+      L+ G
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIG 376

Query: 390 YGEAKQPWRAEELLQVM 406
               ++   + EL Q M
Sbjct: 377 LCRGERLTESCELFQAM 393



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 182/380 (47%), Gaps = 9/380 (2%)

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ +N ++   ++SG  D     +  M  +GC P T TY  L++      + EE+  + +
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M+  +   PN  +Y+IL+   C    ++EA  ++ +M+  G QP+ VTY +L     + 
Sbjct: 77  GMAA-QGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A  +   M      P+     +++ G+ K+G+M +A R    M E    P +  +
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           NSL+ GF    +   V      M   G  P++ TF+ ++D +   G M +   +F +M  
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G  PD+  ++ L +G    G+P +A+ +L  M + GV P++V +  +I G+  +  +  
Sbjct: 256 LGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH 315

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS-TIQLVA 422
           A+ ++ ++ + G+ P+  +Y T++     A +   A  + + M   G  P  +  I LV 
Sbjct: 316 AIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLV- 374

Query: 423 DSWRAIGLAREAKRVLKSAE 442
                IGL R  +R+ +S E
Sbjct: 375 -----IGLCR-GERLTESCE 388



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 174/357 (48%), Gaps = 36/357 (10%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  + N +I+ GH+P ++TY +L++ L +  + K  + L S++   G  PD +++N
Sbjct: 102 KVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYN 161

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I+  S+ G++ EA ++F++M + GC PT  TYN+L+ G+   G+      L + M + 
Sbjct: 162 VLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQ 221

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
             V PN  T+N L+  +C    + EA  +  +M + G  PD V+YNTL R     G+ + 
Sbjct: 222 GCV-PNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHE 280

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A+++L EM  + V P+  +  I++ GY K G ++ A++  Y + +  + P+   ++++I 
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340

Query: 249 ----------GFLDIKD----SDGVDKALTL---------------------MEEFGVKP 273
                      F+  KD        D A+ +                     M +F   P
Sbjct: 341 CLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVP 400

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
            +  ++ +M     A       EIF ++ + G  PD+ +  ++ +   R+ + + AE
Sbjct: 401 LIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKEAAE 457


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 210/420 (50%), Gaps = 37/420 (8%)

Query: 42  QKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM-KDSGCKPTTS 100
           + R     S++    K G+  + + FN ++        V +A+ +F+K+ ++  C+P   
Sbjct: 110 RHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEV 169

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
            Y T++ G    G  E++L LL++M Q  N KP+ RTY+I++ A C   +++ A N++ +
Sbjct: 170 MYGTVMNGLSKRGHTEKTLSLLRIMEQG-NTKPDVRTYSIVIDALCKDINLDAAINLLNE 228

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           M    I P+  TYN+L     + G+  + + +L EM N  + PN  T  I++ G CKEG 
Sbjct: 229 MKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGK 288

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGF------------LDIKDSDGVD-------- 260
           +EDA   +  M E  V P+++ +++++ G+             ++    G+         
Sbjct: 289 VEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSI 348

Query: 261 ------------KALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
                       KA+ L  E    G+KPD VT+STI+      G +G  ++IFD+M++ G
Sbjct: 349 LINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVG 408

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
             PDI + S L  GY + G  ++A  + + + +     N+  +T VI+G C   +++ A 
Sbjct: 409 PTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAH 468

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           +I+EK+  IG+ P+++TY  ++ G+         + +L+ ME+ G      T  ++   +
Sbjct: 469 AIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGF 528



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 101/410 (24%), Positives = 205/410 (50%), Gaps = 5/410 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEG-HRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           L  + K  +A  +F  L+ E    P  + Y T++  L+++   +  LSL+  +E+   KP
Sbjct: 142 LFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKP 201

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D   ++ +I+A  +  N+D A+ +  +MK     P   TYN+LI G   +G+ E+   LL
Sbjct: 202 DVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLL 261

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             M  + N+ PN  T++IL+   C +  +E+A  V+  M+  G++PD +TY+ +   Y  
Sbjct: 262 SEMV-NLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCL 320

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+  RA ++   +++  ++PN  +  I+++GYCK+ N+  AM+    + +  + P+ V 
Sbjct: 321 RGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVT 380

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +++++ G +++       K    M   G  PD+   ST++  +   GL+ +   +F  + 
Sbjct: 381 YSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLE 440

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           +   + +I  ++++  G  +    ++A +I   +   G+ P+V  +  +I+G+C      
Sbjct: 441 RNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFD 500

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
               I  KM + G   N  TY  ++ G+  +    +  E++  M+E   R
Sbjct: 501 EVKGILRKMEDNGCPANNITYNVIMQGFFRSN---KISEIVSFMKEMAGR 547



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 184/379 (48%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F+ ++     P++I ++ L   +   K + +++SL  ++   G+     + N + 
Sbjct: 45  DAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVT 104

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N+      +D A  +      +G      T+NTL+ G     K  +++ L + + ++K  
Sbjct: 105 NSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKIC 164

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +PN+  Y  ++     +   E+  +++  M     +PD  TY+ +  A  +      A  
Sbjct: 165 EPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAIN 224

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L EM+   + PN  T   ++ G CK G  E     L  M  L ++PN+  F+ LI G  
Sbjct: 225 LLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLC 284

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                +  D+ +  M E GV+PD++T+S IMD +   G + + + +F+ +   GI+P+I 
Sbjct: 285 KEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIF 344

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            +SIL  GY +     KA  +   + + G+ P+ V ++T++ G     ++  A  I+++M
Sbjct: 345 SYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEM 404

Query: 372 CEIGINPNLKTYETLLWGY 390
             +G  P++  + TLL+GY
Sbjct: 405 LRVGPTPDICLHSTLLFGY 423



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 137/283 (48%), Gaps = 1/283 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P + T++ L+  L ++ + +    ++  + + G++PD I ++A+++     G VD A ++
Sbjct: 271 PNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRV 330

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F  ++D G KP   +Y+ LI GY       ++++L   +SQ K +KP+  TY+ ++    
Sbjct: 331 FNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQ-KGLKPDTVTYSTILHGLI 389

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               I +A  +  +M+  G  PD   ++TL   Y +YG    A  +  +++ N+   N  
Sbjct: 390 EVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNIS 449

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
              ++++G CK   + +A     ++  + + P++  +N +I GF      D V   L  M
Sbjct: 450 FYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKM 509

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
           E+ G   + +T++ IM  +  +  + +      +M   G   D
Sbjct: 510 EDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFD 552



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/328 (22%), Positives = 151/328 (46%), Gaps = 3/328 (0%)

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           +++A ++ ++MV     P  + ++ L +             +  EM+   +  ++    I
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG-FLDIKDSDGVDKALTLMEEF 269
           + + YC    ++ A   L    +  +  N+V FN+L+ G F + K +D V     L+ E 
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
             +P+ V + T+M+  S  G   K   +   M +   +PD+  +SI+     +      A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
            ++L  M++  + PN+  + ++I G C   + ++  ++  +M  + INPN+ T+  L+ G
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMP 449
             +  +   A+E+++ M EKGV P   T   + D +   G    A+RV  +   D+   P
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVF-NVLRDKGIKP 341

Query: 450 NKKD-EIAVESIHRKQNLSASNSTFLQI 476
           N     I +    +K+NL+ +   F +I
Sbjct: 342 NIFSYSILINGYCKKKNLAKAMQLFGEI 369



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 110/241 (45%), Gaps = 34/241 (14%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+   A  +FN L ++G +P + +Y+ L+    ++K     + L  ++ + G+KPD++ 
Sbjct: 321 RGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVT 380

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL---LQ 123
           ++ +++   E G + +A KIF +M   G  P    ++TL+ GY   G  EE++ L   L+
Sbjct: 381 YSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLE 440

Query: 124 LMSQDKNVK-------------------------------PNDRTYNILVRAWCSKNSIE 152
              +D N+                                P+ RTYN+++  +C +   +
Sbjct: 441 RNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFD 500

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           E   ++ KM  +G   + +TYN + + + +  +       + EM       +  T G+++
Sbjct: 501 EVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLI 560

Query: 213 S 213
           +
Sbjct: 561 N 561



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 47/106 (44%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L    +  EAH IF  L   G  P + TY  ++    R+  F  +  ++ K+E +G 
Sbjct: 455 INGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGC 514

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLI 106
             ++I +N ++     S  + E +   ++M   G     +T   LI
Sbjct: 515 PANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLI 560


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/500 (24%), Positives = 226/500 (45%), Gaps = 7/500 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+LV   K      +++ +   G +P ++T+ TL+ AL R  + ++ + ++ ++   G+
Sbjct: 153 LNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGV 212

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   F  ++    E G+++ A+++  +M + GC  T  T N LI GY  +G+ E++L 
Sbjct: 213 APDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALG 272

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            +Q    D   +P+  TYN  V   C  + +  A  V+  MV  G  PD  TYN +    
Sbjct: 273 YIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 331

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A+ +L +M +    P+  T   +++  C    +E+A+    ++    V P++
Sbjct: 332 CKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDV 391

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FN LI     + D     +    M+  G  PD VT++T++D   S G +GK  ++  D
Sbjct: 392 YTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD 451

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G       ++ +  G  +    ++AE +   M   G+  N + F T+I G C   K
Sbjct: 452 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  +  +M   G+ PN  TY ++L  Y +     +A ++L+ M   G      T   
Sbjct: 512 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVV 480
           + +     G  + A +VL+           K     ++S+ R+ N+  + S F ++  V 
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV- 630

Query: 481 SSEHNGSSAAKIRSQIVLRS 500
                G     +  +IV R 
Sbjct: 631 -----GEPPDALTYKIVFRG 645



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 201/411 (48%), Gaps = 2/411 (0%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
           I +G  P  ITY T V  L +       L ++  + ++G  PD   +N ++N   ++G +
Sbjct: 278 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 337

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           +EA  I  +M D GC P  +T+NTLI       + EE+L L + ++  K V P+  T+NI
Sbjct: 338 EEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV-KGVSPDVYTFNI 396

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+ A C       A  +  +M  SG  PD VTYNTL       G+  +A  +L +M++  
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
              +  T   I+ G CK+  +E+A     +M    +  N + FN+LI G    K  D   
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           + +  M   G++P+ +T+++I+  +   G + K  +I + M   G E D+  +  L  G 
Sbjct: 517 ELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            +AG  Q A  +L  MR  G+ P    +  V+        ++ A+S++ +M E+G  P+ 
Sbjct: 577 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636

Query: 381 KTYETLLWGYGEAKQPWR-AEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
            TY+ +  G      P + A + +  M +KG  P+ S+ +++A+    +G+
Sbjct: 637 LTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGM 687



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 202/420 (48%), Gaps = 7/420 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +   + Y  L+  L    + K + S+ S++   G+KPD + FN ++ A   +  V  A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + + ++M   G  P  +T+ TL++G+   G  E +L++   M +         T N+L+ 
Sbjct: 201 VIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE-MGCSATKVTVNVLIN 259

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +C    +E+A   + + +A G +PD +TYNT      Q      A +++  M      P
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T  I+V+  CK G +E+A   L +M +    P++  FN+LI         + +++AL
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALC---TGNRLEEAL 376

Query: 264 TLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
            L  +    GV PDV TF+ +++A    G       +F++M  +G  PD   ++ L    
Sbjct: 377 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
              G+  KA  +L  M   G   + + + T+I G C  ++++ A  ++++M   GI+ N 
Sbjct: 437 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 496

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            T+ TL+ G  + K+   A EL+  M  +G++P   T   +   +   G  ++A  +L++
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/417 (21%), Positives = 187/417 (44%), Gaps = 51/417 (12%)

Query: 70  MINACSESGNVDEAMKIFQK-MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           ++ A  E  + D A+++    +      P    Y  +I+  G VG    +L L++++  +
Sbjct: 44  LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVG----ALDLMKVLVAE 99

Query: 129 KNVKPNDRTYNIL---VRAWCSKNSIEEAWNVVYKMVAS--GIQPDA------------- 170
              + +     ++   + ++  +   ++A +++   +    GIQ D              
Sbjct: 100 MRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEG 159

Query: 171 ----------------------VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
                                 VT+NTL +A  +  +   A  ML EM +  V P+E T 
Sbjct: 160 SKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTF 219

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             ++ G+ +EG++E A+R   RM E+      V  N LI G+  +     V+ AL  +++
Sbjct: 220 TTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGR---VEDALGYIQQ 276

Query: 269 ---FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
               G +PD +T++T ++       +G   ++ D MV+ G +PD+  ++I+     + G+
Sbjct: 277 EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 336

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            ++A+ IL  M   G  P++  F T+I+  C   +++ A+ +  ++   G++P++ T+  
Sbjct: 337 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 396

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           L+    +   P  A  L + M+  G  P + T   + D+  ++G   +A  +LK  E
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDME 453



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/230 (20%), Positives = 93/230 (40%), Gaps = 41/230 (17%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   +A  I   +   G    ++TY TL+  L +  R +  L ++  +   GM+P    
Sbjct: 544 QGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKA 603

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N ++ +     N+ +A+ +F++M +                   VG+P ++L       
Sbjct: 604 YNPVLQSLFRRNNIRDALSLFREMAE-------------------VGEPPDAL------- 637

Query: 127 QDKNVKPNDRTYNILVRAWC-SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG- 184
                     TY I+ R  C     I+EA++ + +MV  G  P+  ++  LA      G 
Sbjct: 638 ----------TYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGM 687

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           + Y    +   M+   +R ++ +    + GY K     DA+    R  E+
Sbjct: 688 DDYFIRAIEIIMEKVDLRESDVSA---IRGYLKIRKFYDALATFGRFLEI 734



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 66/136 (48%), Gaps = 1/136 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+   A  +   +  +G RPT   Y  ++ +L R+   +  LSL  ++ + G 
Sbjct: 573 INGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGE 632

Query: 61  KPDSILFNAMINA-CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
            PD++ +  +    C   G + EA     +M D G  P  S++  L +G  N+G  +  +
Sbjct: 633 PPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFI 692

Query: 120 KLLQLMSQDKNVKPND 135
           + ++++ +  +++ +D
Sbjct: 693 RAIEIIMEKVDLRESD 708


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 202/414 (48%), Gaps = 2/414 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT  TY  L+   TR  R +  L+   ++ + G++ D I+ N ++    E+   DEA+ I
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 168

Query: 87  -FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV-KPNDRTYNILVRA 144
              +  + GC P   +Y+ L+K   + GK  ++  LL++M++   V  P+   YN ++  
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDG 228

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +  +  + +A ++  +MV  GI PD VTY+++  A  +     +AE  L +M N  V PN
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   ++ GY   G  ++A+R    M+   + P++V FN L+                 
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFD 348

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M   G  PDV +++ +++ +++ G +    ++FD M+  GI P I  F++L K Y   G
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCG 408

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              KA  I   MR +GV PNV+ +TTVI+  C   KM  AM  + +M + G+ P+   Y 
Sbjct: 409 MLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            L+ G+       +A+EL+  +   G+         + ++   +G   +A+ + 
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIF 522



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 210/434 (48%), Gaps = 3/434 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGH--RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK 61
           L  +GK  +A  +   + E G    P ++ Y T++    ++        L  ++ + G+ 
Sbjct: 192 LCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP 251

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           PD + ++++++A  ++  +D+A    ++M + G  P   TYN LI GY + G+ +E++++
Sbjct: 252 PDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRV 311

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
            + M + +++ P+  T+N+L+ + C    I+EA +V   M   G  PD  +YN +   YA
Sbjct: 312 FKEMRR-QSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYA 370

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
             G       +   M  + + P   T  +++  Y   G ++ AM     M++  V PN++
Sbjct: 371 TKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVL 430

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            + ++I     I   D   +    M + GV PD   +  ++  + + G + K +E+  ++
Sbjct: 431 TYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEI 490

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           +  G+  DI +FS +     + G    A++I       G+HP  V+++ ++ G+C   KM
Sbjct: 491 MNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKM 550

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           ++A+ +++ M   GI PN   Y TL+ GY +  +      L + M +KG++P      ++
Sbjct: 551 EKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 610

Query: 422 ADSWRAIGLAREAK 435
            D     G    AK
Sbjct: 611 IDGLFEAGRTVPAK 624



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 205/423 (48%), Gaps = 9/423 (2%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM--KPDSILFNAMINACSESGN 79
           E G  P + +Y+ L+ +L  Q +      L+  + + G    PD + +N +I+   + G+
Sbjct: 175 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGD 234

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V++A  +F++M   G  P   TY++++         +++   L+ M  +K V PN+ TYN
Sbjct: 235 VNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMV-NKGVLPNNWTYN 293

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+  + S    +EA  V  +M    I PD VT+N L  +  +YG+   A  +   M   
Sbjct: 294 NLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMK 353

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+  +  I+++GY  +G + D       M    + P +  FN LIK +    +   +
Sbjct: 354 GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAY---ANCGML 410

Query: 260 DKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           DKA+ +   M + GVKP+V+T++T++ A    G M    E F+ M+  G+ PD + +  L
Sbjct: 411 DKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCL 470

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
            +G+   G   KA+ +++ +   G+H ++V+F+++I+  C   ++  A +I++    +G+
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
           +P    Y  L+ GY    +  +A  +   M   G+ P       + + +  IG   E   
Sbjct: 531 HPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLS 590

Query: 437 VLK 439
           + +
Sbjct: 591 LFR 593



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 197/418 (47%), Gaps = 36/418 (8%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  ++A  +F  +++ G  P  +TY+++V AL + +      + + ++   G+ P++  
Sbjct: 232 EGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWT 291

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I   S +G   EA+++F++M+     P   T+N L+      GK +E+  +   M+
Sbjct: 292 YNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMA 351

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K   P+  +YNI++  + +K  + +  ++   M+  GI P   T+N L +AYA  G  
Sbjct: 352 M-KGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGML 410

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A  +  EM+++ V+PN  T   +++  C+ G M+DAM    +M +  V P+   ++ L
Sbjct: 411 DKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCL 470

Query: 247 IKGF----------------------LDIKDSDGVDKALT-------------LMEEFGV 271
           I+GF                      LDI     +   L              L    G+
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            P  V +S +MD +   G M K   +FD MV AGIEP+  V+  L  GY + G   +  S
Sbjct: 531 HPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLS 590

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           +   M + G+ P+ +++  +I G   A +   A   + +M E GI  N  TY  +L G
Sbjct: 591 LFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRG 648



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 103/428 (24%), Positives = 203/428 (47%), Gaps = 11/428 (2%)

Query: 1   MNILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
            N+L+G     GK  EA  +F+ +  +G  P + +Y  ++     +     +  L   + 
Sbjct: 327 FNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML 386

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
            DG+ P    FN +I A +  G +D+AM IF +M+D G KP   TY T+I     +GK +
Sbjct: 387 GDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMD 446

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           ++++    M  D+ V P+   Y+ L++ +C+  S+ +A  ++ +++ +G+  D V ++++
Sbjct: 447 DAMEKFNQMI-DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSI 505

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
                + G    A+ +     N  + P      +++ GYC  G ME A+R    M    +
Sbjct: 506 INNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGK 293
            PN VV+ +L+ G+  I     +D+ L+L  E    G+KP  + ++ I+D    AG    
Sbjct: 566 EPNDVVYGTLVNGYCKIGR---IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVP 622

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
            +  F +M ++GI  +   +SI+ +G  +     +A  +   +R   V  +++   T+I+
Sbjct: 623 AKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIA 682

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G     +++ A  ++  +   G+ P + TY  ++    +      AE++   M+  G  P
Sbjct: 683 GMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP 742

Query: 414 KKSTIQLV 421
               +  V
Sbjct: 743 DSRLLNHV 750



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 97/435 (22%), Positives = 205/435 (47%), Gaps = 1/435 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F  +  +   P ++T+  L+ +L +  + K    +   +   G  PD   +
Sbjct: 303 GQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 362

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N M+N  +  G + +   +F  M   G  P   T+N LIK Y N G  ++++ +   M +
Sbjct: 363 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM-R 421

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D  VKPN  TY  ++ A C    +++A     +M+  G+ PD   Y+ L + +  +G   
Sbjct: 422 DHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLL 481

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A++++ E+ NN +  +      I++  CK G + DA         + +HP  VV++ L+
Sbjct: 482 KAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLM 541

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G+  +   +   +    M   G++P+ V + T+++ +   G + +   +F +M++ GI+
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 601

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P   +++I+  G   AG    A+     M + G+  N   ++ V+ G         A+ +
Sbjct: 602 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 661

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           ++++  + +  ++ T  T++ G  + ++   A++L   +   G+ P   T  ++  +   
Sbjct: 662 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIK 721

Query: 428 IGLAREAKRVLKSAE 442
            GL  EA+ +  S +
Sbjct: 722 EGLVEEAEDMFSSMQ 736



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 158/329 (48%), Gaps = 1/329 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A   FN +I++G  P    Y  L+              LIS++  +GM  D +LF
Sbjct: 443 GKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLF 502

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +++IN   + G V +A  IF    + G  PT   Y+ L+ GY  VGK E++L++   M  
Sbjct: 503 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVS 562

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              ++PND  Y  LV  +C    I+E  ++  +M+  GI+P  + YN +     + G T 
Sbjct: 563 -AGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTV 621

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A+    EM  + +  N+ T  I++ G  K    ++A+     ++ + V  +++  N++I
Sbjct: 622 PAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMI 681

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G    +  +        +   G+ P VVT+S ++      GL+ + +++F  M  AG E
Sbjct: 682 AGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 741

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSM 336
           PD  + + + +  ++  E  +A + L+ +
Sbjct: 742 PDSRLLNHVVRELLKKNEIVRAGAYLSKI 770



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/369 (21%), Positives = 178/369 (48%), Gaps = 7/369 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  IFN + + G +P ++TYTT++AAL R  +    +   +++   G+ PD   +
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +I      G++ +A ++  ++ ++G       ++++I     +G+  ++  +  L + 
Sbjct: 468 HCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDL-TV 526

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  + P    Y++L+  +C    +E+A  V   MV++GI+P+ V Y TL   Y + G   
Sbjct: 527 NVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRID 586

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
               +  EM    ++P+     II+ G  + G    A    + M E  +  N   ++ ++
Sbjct: 587 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 646

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +G      +   D+A+ L +E     VK D++T +T++        + + +++F  + ++
Sbjct: 647 RGLF---KNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 703

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+ P +  +SI+    ++ G  ++AE + +SM+  G  P+  +   V+       ++ RA
Sbjct: 704 GLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 763

Query: 365 MSIYEKMCE 373
            +   K+ E
Sbjct: 764 GAYLSKIDE 772



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/296 (21%), Positives = 135/296 (45%), Gaps = 4/296 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  +A  IF+  +  G  PT + Y+ L+       + +  L +   +   G+
Sbjct: 506 INNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ +++  ++N   + G +DE + +F++M   G KP+T  YN +I G    G+   +  
Sbjct: 566 EPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 625

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M++   +  N  TY+I++R        +EA  +  ++ A  ++ D +T NT+    
Sbjct: 626 KFHEMTE-SGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 684

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q      A+ +   +  + + P   T  I+++   KEG +E+A      M+     P+ 
Sbjct: 685 FQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDS 744

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            + N +++  L   +       L+ ++E     + +T   ++D +SS    G C+E
Sbjct: 745 RLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSK---GTCRE 797



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 108/256 (42%), Gaps = 36/256 (14%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  +F+ ++  G  P  + Y TLV    +  R    LSL  ++ + G+KP +IL+
Sbjct: 548 GKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY 607

Query: 68  NAMINACSESGNV-----------------------------------DEAMKIFQKMKD 92
           N +I+   E+G                                     DEA+ +F++++ 
Sbjct: 608 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRA 667

Query: 93  SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIE 152
              K    T NT+I G     + EE+  L   +S+   V P   TY+I++     +  +E
Sbjct: 668 MNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV-PCVVTYSIMITNLIKEGLVE 726

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           EA ++   M  +G +PD+   N + R   +  E  RA   L ++          T  ++V
Sbjct: 727 EAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLV 786

Query: 213 SGYCKEGNMEDAMRFL 228
             +  +G   + +RFL
Sbjct: 787 DLFSSKGTCREHIRFL 802



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 108/249 (43%), Gaps = 40/249 (16%)

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD-GVDK 261
           P   T  I++    +    E A+ F  ++    +  ++++ N L+KGF + K +D  +D 
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 168

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            L    E G  PDV +                                   +SIL K   
Sbjct: 169 LLHRTPELGCVPDVFS-----------------------------------YSILLKSLC 193

Query: 322 RAGEPQKAESILTSMRKYGV--HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             G+  +A+ +L  M + G    P+VV + TVI G+     + +A  ++++M + GI P+
Sbjct: 194 DQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 253

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             TY +++    +A+   +AE  L+ M  KGV P   T   +   + + G  +EA RV K
Sbjct: 254 FVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 313

Query: 440 SAEEDRQSM 448
             E  RQS+
Sbjct: 314 --EMRRQSI 320


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 232/478 (48%), Gaps = 6/478 (1%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           ++  +G   +A  +F+ +I  G  P    Y +L+    R+K  +    L+ +++K  +  
Sbjct: 356 VMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
               +  ++     SG++D A  I ++M  SGC+P    Y TLIK +    +  +++++L
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           + M +++ + P+   YN L+        ++EA + + +MV +G++P+A TY      Y +
Sbjct: 476 KEM-KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
             E   A++ + EM+   V PN+  C  +++ YCK+G + +A      M +  +  +   
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +  L+ G       D  ++    M   G+ PDV ++  +++ +S  G M K   IFD+MV
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           + G+ P++ ++++L  G+ R+GE +KA+ +L  M   G+HPN V + T+I G+C +  + 
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A  ++++M   G+ P+   Y TL+ G        RA  +     +KG     +    + 
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPFNALI 773

Query: 423 DSWRAIG---LAREAKRVLKSAEEDRQSMPNKKD-EIAVESIHRKQNLSASNSTFLQI 476
           +     G   L  E    L     DR   PN     I ++ + ++ NL A+   F Q+
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 202/408 (49%), Gaps = 1/408 (0%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           TY+ L+  L + +   +   L+ ++   G+     +++  I   S+ G +++A  +F  M
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM 373

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
             SG  P    Y +LI+GY       +  +LL  M + +N+  +  TY  +V+  CS   
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK-RNIVISPYTYGTVVKGMCSSGD 432

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           ++ A+N+V +M+ASG +P+ V Y TL + + Q      A ++L EM+   + P+      
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++ G  K   M++A  FL  M E  + PN   + + I G+++  +    DK +  M E G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           V P+ V  + +++ +   G + +    +  MV  GI  D   +++L  G  +  +   AE
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            I   MR  G+ P+V  +  +I+G+     MQ+A SI+++M E G+ PN+  Y  LL G+
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             + +  +A+ELL  M  KG+ P   T   + D +   G   EA R+ 
Sbjct: 673 CRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 190/394 (48%), Gaps = 6/394 (1%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+ P    ++ +I+   +   +++A  +  +M   G      TY+ LI G    G+  ++
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK-GRNADA 330

Query: 119 LKLL--QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
            K L  +++S   N+KP    Y+  +     +  +E+A  +   M+ASG+ P A  Y +L
Sbjct: 331 AKGLVHEMVSHGINIKP--YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
              Y +     +  ++L EM+   +  +  T G +V G C  G+++ A   +  M     
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            PN+V++ +LIK FL         + L  M+E G+ PD+  +++++   S A  M + + 
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
              +MV+ G++P+   +     GY+ A E   A+  +  MR+ GV PN V+ T +I+ +C
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
              K+  A S Y  M + GI  + KTY  L+ G  +  +   AEE+ + M  KG+ P   
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           +  ++ + +  +G  ++A  +     E+  + PN
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLT-PN 661



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/474 (21%), Positives = 212/474 (44%), Gaps = 56/474 (11%)

Query: 2   NILVGKGKP---HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           ++++G  K     EA      ++E G +P   TY   ++       F S    + ++ + 
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+ P+ +L   +IN   + G V EA   ++ M D G      TY  L+ G     K +++
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
            ++ + M + K + P+  +Y +L+  +    ++++A ++  +MV  G+ P+ + YN L  
Sbjct: 612 EEIFREM-RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            + + GE  +A+++L EM    + PN  T   I+ GYCK G++ +A R    MK   + P
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLM-------------------------------- 266
           +  V+ +L+ G   + D   V++A+T+                                 
Sbjct: 731 DSFVYTTLVDGCCRLND---VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTE 787

Query: 267 ----------EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
                     + FG KP+ VT++ ++D     G +   +E+F  M  A + P +  ++ L
Sbjct: 788 VLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM----- 371
             GY + G   +   +       G+ P+ +M++ +I+ +       +A+ + ++M     
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST-IQLVADS 424
            + G   ++ T   LL G+ +  +   AE++++ M      P  +T I+L+ +S
Sbjct: 907 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINES 960



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 167/371 (45%), Gaps = 23/371 (6%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L    K  +A  IF  +  +G  P + +Y  L+   ++    +   S+  ++ ++G+
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I++N ++     SG +++A ++  +M   G  P   TY T+I GY   G   E+ +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M   K + P+   Y  LV   C  N +E A   ++     G       +N L    
Sbjct: 719 LFDEMKL-KGLVPDSFVYTTLVDGCCRLNDVERAIT-IFGTNKKGCASSTAPFNALINWV 776

Query: 181 AQYGETYRAEQMLFEMQNNQV----RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
            ++G+T    ++L  + +       +PN+ T  I++   CKEGN+E A    ++M+   +
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF------GVKPDVVTFSTIMDAWSSAGL 290
            P ++ + SL+ G+      D + +   +   F      G++PD + +S I++A+   G+
Sbjct: 837 MPTVITYTSLLNGY------DKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890

Query: 291 MGKCQEIFDDM-----VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
             K   + D M     V  G +  I     L  G+ + GE + AE ++ +M +    P+ 
Sbjct: 891 TTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDS 950

Query: 346 VMFTTVISGWC 356
                +I+  C
Sbjct: 951 ATVIELINESC 961



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 104/437 (23%), Positives = 185/437 (42%), Gaps = 67/437 (15%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           + KG   EA ++F+  +     P L     L+ AL R  R    L L   V K GM   +
Sbjct: 162 IAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNR----LDLFWDVYK-GMVERN 216

Query: 65  ILFNA-----MINACSESGNV---------------------DEAMKIFQKMKDSGCKPT 98
           ++F+      +I A   +GNV                     D A+K+ + M   G  P 
Sbjct: 217 VVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPL 276

Query: 99  TSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVV 158
             TY+ LI G   + + E++  LL  M     V  ++ TY++L+       + + A  +V
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDS-LGVSLDNHTYSLLIDGLLKGRNADAAKGLV 335

Query: 159 YKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
           ++MV+ GI      Y+      ++ G   +A+ +   M  + + P  +    ++ GYC+E
Sbjct: 336 HEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCRE 395

Query: 219 GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTF 278
            N+      L  MK+     N+V+                              P   T+
Sbjct: 396 KNVRQGYELLVEMKK----RNIVI-----------------------------SP--YTY 420

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
            T++    S+G +     I  +M+ +G  P++ +++ L K +++      A  +L  M++
Sbjct: 421 GTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKE 480

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            G+ P++  + ++I G   A +M  A S   +M E G+ PN  TY   + GY EA +   
Sbjct: 481 QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS 540

Query: 399 AEELLQVMEEKGVRPKK 415
           A++ ++ M E GV P K
Sbjct: 541 ADKYVKEMRECGVLPNK 557



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 7/160 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G    A  +F+ +      PT+ITYT+L+    +  R   +  +  +    G+
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGI 871

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKM-----KDSGCKPTTSTYNTLIKGYGNVGKP 115
           +PD I+++ +INA  + G   +A+ +  +M      D GCK + ST   L+ G+  VG+ 
Sbjct: 872 EPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEM 931

Query: 116 EESLKLLQLMSQDKNVKPNDRTYNILVRAWC-SKNSIEEA 154
           E + K+++ M + + + P+  T   L+   C S N   EA
Sbjct: 932 EVAEKVMENMVRLQYI-PDSATVIELINESCISSNQRVEA 970



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 65/313 (20%), Positives = 119/313 (38%), Gaps = 67/313 (21%)

Query: 112 VGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAV 171
           V  P + L     +   K  +    +++ L    C+  S E+A +VV +M+     P A 
Sbjct: 74  VDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERN-WPVAE 132

Query: 172 TYNTLARAYAQY-GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
            ++++ R   ++ G++   + +LF              GI+  GY  +G +E+A+     
Sbjct: 133 VWSSIVRCSQEFVGKS--DDGVLF--------------GILFDGYIAKGYIEEAVFVFSS 176

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
              LE+ P L     L+   L                                 W+   L
Sbjct: 177 SMGLELVPRLSRCKVLLDALL--------------------------------RWNRLDL 204

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
                +++  MV+  +  D+  + +L   + RAG  Q  + +L    K         F T
Sbjct: 205 F---WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE--------FRT 253

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
                  A+K++ +M     +C+ G+ P   TY+ L+ G  + K+   A+ LL  M+  G
Sbjct: 254 ATLNVDGALKLKESM-----ICK-GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG 307

Query: 411 VRPKKSTIQLVAD 423
           V     T  L+ D
Sbjct: 308 VSLDNHTYSLLID 320



 Score = 39.7 bits (91), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 59/292 (20%), Positives = 115/292 (39%), Gaps = 37/292 (12%)

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
           LD+ +    +KAL+++E       +     + + WSS   + +C + F      G   D 
Sbjct: 105 LDLCNFGSFEKALSVVERM-----IERNWPVAEVWSS---IVRCSQEF-----VGKSDDG 151

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
            +F IL  GY+  G  ++A  + +S     + P +     ++       ++     +Y+ 
Sbjct: 152 VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211

Query: 371 MCEIGINPNLKTYETLLWGYGEA-------------KQPWR--------AEELLQVMEEK 409
           M E  +  ++KTY  L+  +  A             ++ +R        A +L + M  K
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSAS 469
           G+ P K T  ++ D    I    +AK +L   +    S+ N    + ++ + + +N  A+
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331

Query: 470 NSTFLQIPGVVSSEHNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQP 521
                 +  +VS   N           V+  + V    K+LF     SG+ P
Sbjct: 332 KGL---VHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/500 (24%), Positives = 226/500 (45%), Gaps = 7/500 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+LV   K      +++ +   G +P ++T+ TL+ AL R  + ++ + ++ ++   G+
Sbjct: 153 LNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGV 212

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   F  ++    E G+++ A+++  +M + GC  T  T N LI GY  +G+ E++L 
Sbjct: 213 APDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALG 272

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            +Q    D   +P+  TYN  V   C  + +  A  V+  MV  G  PD  TYN +    
Sbjct: 273 YIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 331

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A+ +L +M +    P+  T   +++  C    +E+A+    ++    V P++
Sbjct: 332 CKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDV 391

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FN LI     + D     +    M+  G  PD VT++T++D   S G +GK  ++  D
Sbjct: 392 YTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD 451

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G       ++ +  G  +    ++AE +   M   G+  N + F T+I G C   K
Sbjct: 452 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  +  +M   G+ PN  TY ++L  Y +     +A ++L+ M   G      T   
Sbjct: 512 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVV 480
           + +     G  + A +VL+           K     ++S+ R+ N+  + S F ++  V 
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV- 630

Query: 481 SSEHNGSSAAKIRSQIVLRS 500
                G     +  +IV R 
Sbjct: 631 -----GEPPDALTYKIVFRG 645



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 201/411 (48%), Gaps = 2/411 (0%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
           I +G  P  ITY T V  L +       L ++  + ++G  PD   +N ++N   ++G +
Sbjct: 278 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 337

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           +EA  I  +M D GC P  +T+NTLI       + EE+L L + ++  K V P+  T+NI
Sbjct: 338 EEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV-KGVSPDVYTFNI 396

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+ A C       A  +  +M  SG  PD VTYNTL       G+  +A  +L +M++  
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
              +  T   I+ G CK+  +E+A     +M    +  N + FN+LI G    K  D   
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           + +  M   G++P+ +T+++I+  +   G + K  +I + M   G E D+  +  L  G 
Sbjct: 517 ELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            +AG  Q A  +L  MR  G+ P    +  V+        ++ A+S++ +M E+G  P+ 
Sbjct: 577 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636

Query: 381 KTYETLLWGYGEAKQPWR-AEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
            TY+ +  G      P + A + +  M +KG  P+ S+ +++A+    +G+
Sbjct: 637 LTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGM 687



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 202/420 (48%), Gaps = 7/420 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +   + Y  L+  L    + K + S+ S++   G+KPD + FN ++ A   +  V  A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + + ++M   G  P  +T+ TL++G+   G  E +L++   M +         T N+L+ 
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE-MGCSATKVTVNVLIN 259

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +C    +E+A   + + +A G +PD +TYNT      Q      A +++  M      P
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T  I+V+  CK G +E+A   L +M +    P++  FN+LI         + +++AL
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALC---TGNRLEEAL 376

Query: 264 TLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
            L  +    GV PDV TF+ +++A    G       +F++M  +G  PD   ++ L    
Sbjct: 377 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
              G+  KA  +L  M   G   + + + T+I G C  ++++ A  ++++M   GI+ N 
Sbjct: 437 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 496

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            T+ TL+ G  + K+   A EL+  M  +G++P   T   +   +   G  ++A  +L++
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/417 (21%), Positives = 187/417 (44%), Gaps = 51/417 (12%)

Query: 70  MINACSESGNVDEAMKIFQK-MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           ++ A  E  + D A+++    +      P    Y  +I+  G VG    +L L++++  +
Sbjct: 44  LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVG----ALDLMKVLVAE 99

Query: 129 KNVKPNDRTYNIL---VRAWCSKNSIEEAWNVVYKMVAS--GIQPDA------------- 170
              + +     ++   + ++  +   ++A +++   +    GIQ D              
Sbjct: 100 MRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEG 159

Query: 171 ----------------------VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
                                 VT+NTL +A  +  +   A  ML EM +  V P+E T 
Sbjct: 160 SKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTF 219

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             ++ G+ +EG++E A+R   RM E+      V  N LI G+  +     V+ AL  +++
Sbjct: 220 TTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGR---VEDALGYIQQ 276

Query: 269 ---FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
               G +PD +T++T ++       +G   ++ D MV+ G +PD+  ++I+     + G+
Sbjct: 277 EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 336

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            ++A+ IL  M   G  P++  F T+I+  C   +++ A+ +  ++   G++P++ T+  
Sbjct: 337 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 396

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           L+    +   P  A  L + M+  G  P + T   + D+  ++G   +A  +LK  E
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDME 453



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/230 (20%), Positives = 93/230 (40%), Gaps = 41/230 (17%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   +A  I   +   G    ++TY TL+  L +  R +  L ++  +   GM+P    
Sbjct: 544 QGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKA 603

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N ++ +     N+ +A+ +F++M +                   VG+P ++L       
Sbjct: 604 YNPVLQSLFRRNNIRDALSLFREMAE-------------------VGEPPDAL------- 637

Query: 127 QDKNVKPNDRTYNILVRAWC-SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG- 184
                     TY I+ R  C     I+EA++ + +MV  G  P+  ++  LA      G 
Sbjct: 638 ----------TYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGM 687

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           + Y    +   M+   +R ++ +    + GY K     DA+    R  E+
Sbjct: 688 DDYFIRAIEIIMEKVDLRESDVSA---IRGYLKIRKFYDALATFGRFLEI 734



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 66/136 (48%), Gaps = 1/136 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+   A  +   +  +G RPT   Y  ++ +L R+   +  LSL  ++ + G 
Sbjct: 573 INGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGE 632

Query: 61  KPDSILFNAMINA-CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
            PD++ +  +    C   G + EA     +M D G  P  S++  L +G  N+G  +  +
Sbjct: 633 PPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFI 692

Query: 120 KLLQLMSQDKNVKPND 135
           + ++++ +  +++ +D
Sbjct: 693 RAIEIIMEKVDLRESD 708


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/500 (24%), Positives = 226/500 (45%), Gaps = 7/500 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+LV   K      +++ +   G +P ++T+ TL+ AL R  + ++ + ++ ++   G+
Sbjct: 153 LNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGV 212

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   F  ++    E G+++ A+++  +M + GC  T  T N LI GY  +G+ E++L 
Sbjct: 213 APDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALG 272

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            +Q    D   +P+  TYN  V   C  + +  A  V+  MV  G  PD  TYN +    
Sbjct: 273 YIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 331

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A+ +L +M +    P+  T   +++  C    +E+A+    ++    V P++
Sbjct: 332 CKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDV 391

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FN LI     + D     +    M+  G  PD VT++T++D   S G +GK  ++  D
Sbjct: 392 YTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD 451

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G       ++ +  G  +    ++AE +   M   G+  N + F T+I G C   K
Sbjct: 452 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  +  +M   G+ PN  TY ++L  Y +     +A ++L+ M   G      T   
Sbjct: 512 IDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVV 480
           + +     G  + A +VL+           K     ++S+ R+ N+  + S F ++  V 
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV- 630

Query: 481 SSEHNGSSAAKIRSQIVLRS 500
                G     +  +IV R 
Sbjct: 631 -----GEPPDALTYKIVFRG 645



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 200/411 (48%), Gaps = 2/411 (0%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
           I +G  P  ITY T V  L +       L ++  + ++G  PD   +N ++N   ++G +
Sbjct: 278 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 337

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           +EA  I  +M D GC P  +T+NTLI       + EE+L L + ++  K V P+  T+NI
Sbjct: 338 EEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV-KGVSPDVYTFNI 396

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+ A C       A  +  +M  SG  PD VTYNTL       G+  +A  +L +M++  
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
              +  T   I+ G CK+  +E+A     +M    +  N + FN+LI G    K  D   
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
             +  M   G++P+ +T+++I+  +   G + K  +I + M   G E D+  +  L  G 
Sbjct: 517 GLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            +AG  Q A  +L  MR  G+ P    +  V+        ++ A+S++ +M E+G  P+ 
Sbjct: 577 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636

Query: 381 KTYETLLWGYGEAKQPWR-AEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
            TY+ +  G      P + A + +  M +KG  P+ S+ +++A+    +G+
Sbjct: 637 LTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGM 687



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/417 (21%), Positives = 187/417 (44%), Gaps = 51/417 (12%)

Query: 70  MINACSESGNVDEAMKIFQK-MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           ++ A  E  + D A+++    +      P    Y  +I+  G VG    +L L++++  +
Sbjct: 44  LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVG----ALDLMKVLVAE 99

Query: 129 KNVKPNDRTYNIL---VRAWCSKNSIEEAWNVVYKMVAS--GIQPDA------------- 170
              + +     ++   + ++  +   ++A +++   +    GIQ D              
Sbjct: 100 MRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEG 159

Query: 171 ----------------------VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
                                 VT+NTL +A  +  +   A  ML EM +  V P+E T 
Sbjct: 160 SKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTF 219

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             ++ G+ +EG++E A+R   RM E+      V  N LI G+  +     V+ AL  +++
Sbjct: 220 TTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGR---VEDALGYIQQ 276

Query: 269 ---FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
               G +PD +T++T ++       +G   ++ D MV+ G +PD+  ++I+     + G+
Sbjct: 277 EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 336

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            ++A+ IL  M   G  P++  F T+I+  C   +++ A+ +  ++   G++P++ T+  
Sbjct: 337 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 396

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           L+    +   P  A  L + M+  G  P + T   + D+  ++G   +A  +LK  E
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDME 453



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/230 (20%), Positives = 93/230 (40%), Gaps = 41/230 (17%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   +A  I   +   G    ++TY TL+  L +  R +  L ++  +   GM+P    
Sbjct: 544 QGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKA 603

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N ++ +     N+ +A+ +F++M +                   VG+P ++L       
Sbjct: 604 YNPVLQSLFRRNNIRDALSLFREMAE-------------------VGEPPDAL------- 637

Query: 127 QDKNVKPNDRTYNILVRAWC-SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG- 184
                     TY I+ R  C     I+EA++ + +MV  G  P+  ++  LA      G 
Sbjct: 638 ----------TYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGM 687

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           + Y    +   M+   +R ++ +    + GY K     DA+    R  E+
Sbjct: 688 DDYFIRAIEIIMEKVDLRESDVSA---IRGYLKIRKFYDALATFGRFLEI 734



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 66/136 (48%), Gaps = 1/136 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+   A  +   +  +G RPT   Y  ++ +L R+   +  LSL  ++ + G 
Sbjct: 573 INGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGE 632

Query: 61  KPDSILFNAMINA-CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
            PD++ +  +    C   G + EA     +M D G  P  S++  L +G  N+G  +  +
Sbjct: 633 PPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFI 692

Query: 120 KLLQLMSQDKNVKPND 135
           + ++++ +  +++ +D
Sbjct: 693 RAIEIIMEKVDLRESD 708


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 213/448 (47%), Gaps = 6/448 (1%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F  ++     P++I +  L+  + R  R   ++SL  K+E   M  ++  F  ++
Sbjct: 64  DAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILM 123

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                   +  A+  F K+   G  PT  T+NTL+ G     +  E+L L   M      
Sbjct: 124 KCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMC----- 178

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KPN  T+  L+   C +  + EA  ++ +M+  G+QP+ +TY T+     + G+T  A  
Sbjct: 179 KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALN 238

Query: 192 MLFEMQN-NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           +L +M+  + + PN      I+ G  K+G   DA      M+E E+ P++V +N +I GF
Sbjct: 239 LLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGF 298

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
                    ++ L  M E  + PDVVTFS +++A+   G   + +E++D+M+   I P  
Sbjct: 299 CISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPST 358

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             +S +  G+ +      AE +       G  P+++ F T+I+G+C A ++   + +  +
Sbjct: 359 VTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHE 418

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M E G+  N  TY TL+ G+ +      A++LLQ M   GV P   T   + D     G 
Sbjct: 419 MTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGK 478

Query: 431 AREAKRVLKSAEEDRQSMPNKKDEIAVE 458
            ++A  + K+ ++ +  +   +    VE
Sbjct: 479 LKDALEMFKAMQKSKMDIDASRPFNGVE 506



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 224/449 (49%), Gaps = 22/449 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK-DG 59
           MN L  +G+  EA  + + ++E+G +P  ITY T+V  + +     S L+L+ K+E+   
Sbjct: 189 MNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSH 248

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + P+ +++N +I+   + G   +A  +F +M++    P   TYN +I G+   G+  ++ 
Sbjct: 249 IIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAE 308

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +LLQ M + K + P+  T++ L+ A+  +    EA  +  +M+   I P  VTY+++   
Sbjct: 309 QLLQEMLERK-INPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDG 367

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + +      AE M +        P+  T   +++GYC+   ++D ++ L+ M E  +  N
Sbjct: 368 FCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVAN 427

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            + + +LI GF  + D +     L  M   GV P+VVT +T++D     G +    E+F 
Sbjct: 428 TITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFK 487

Query: 300 DMVKA-----------GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
            M K+           G+EPD+  ++IL  G +  G+  +AE +   M   G+ P+ + +
Sbjct: 488 AMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITY 547

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           +++I G C   ++  A  +++ M     +P++ T+ TL+ GY +A       EL   M +
Sbjct: 548 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQ 607

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           +G+         VAD+   I L    ++V
Sbjct: 608 RGI---------VADAITYITLIYGFRKV 627



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 211/446 (47%), Gaps = 22/446 (4%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           F  + + G  PT++T+ TL+  L  + R    L L  ++     KP+ + F  ++N    
Sbjct: 139 FGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCR 194

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
            G V EA+ +  +M + G +P   TY T++ G   +G    +L LL+ M +  ++ PN  
Sbjct: 195 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVV 254

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
            YN ++          +A N+  +M    I PD VTYN +   +   G    AEQ+L EM
Sbjct: 255 IYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEM 314

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
              ++ P+  T   +++ + KEG   +A      M    + P+ V ++S+I GF      
Sbjct: 315 LERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRL 374

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           D  +    L    G  PD++TF+T++  +  A  +    ++  +M +AG+  +   ++ L
Sbjct: 375 DAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTL 434

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI-- 374
             G+ + G+   A+ +L  M   GV PNVV   T++ G C+  K++ A+ +++ M +   
Sbjct: 435 IHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 375 ---------GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
                    G+ P+++TY  L+ G     +   AEEL + M  +G+ P   T   + D  
Sbjct: 495 DIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID-- 552

Query: 426 RAIGLAREAKRVLKSAEEDRQSMPNK 451
              GL ++++  L  A +   SM +K
Sbjct: 553 ---GLCKQSR--LDEATQMFDSMGSK 573



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 106/427 (24%), Positives = 209/427 (48%), Gaps = 13/427 (3%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L  +  +P ++T+TTL+  L R+ R    ++L+ ++ +DG++P+ I +  +++   + G+
Sbjct: 173 LFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGD 232

Query: 80  VDEAMKIFQKMKD-SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
              A+ + +KM++ S   P    YNT+I G    G+  ++  L   M Q+K + P+  TY
Sbjct: 233 TVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEM-QEKEIFPDIVTY 291

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           N ++  +C      +A  ++ +M+   I PD VT++ L  A+ + G+ + AE++  EM  
Sbjct: 292 NCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLP 351

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
             + P+  T   ++ G+CK+  ++ A    Y        P+++ FN+LI G+   K  D 
Sbjct: 352 RSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDD 411

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
             K L  M E G+  + +T++T++  +   G +   Q++  +M+ +G+ P++   + L  
Sbjct: 412 GIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLD 471

Query: 319 GYVRAGEPQKAESILTSMRKY-----------GVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           G    G+ + A  +  +M+K            GV P+V  +  +I G  N  K   A  +
Sbjct: 472 GLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEEL 531

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           YE+M   GI P+  TY +++ G  +  +   A ++   M  K   P   T   +   +  
Sbjct: 532 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCK 591

Query: 428 IGLAREA 434
            G+  + 
Sbjct: 592 AGMVDDG 598



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 97/411 (23%), Positives = 201/411 (48%), Gaps = 12/411 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +AH +F  + E+   P ++TY  ++       R+     L+ ++ +  + PD + F
Sbjct: 267 GRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTF 326

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +A+INA  + G   EA +++ +M      P+T TY+++I G+    + + +  +  L + 
Sbjct: 327 SALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYL-TP 385

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K   P+  T+N L+  +C    +++   ++++M  +G+  + +TY TL   + Q G+  
Sbjct: 386 TKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLN 445

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-----------V 236
            A+ +L EM ++ V PN  TC  ++ G C  G ++DA+     M++ +           V
Sbjct: 446 AAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGV 505

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P++  +N LI G ++       ++    M   G+ PD +T+S+++D       + +  +
Sbjct: 506 EPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 565

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +FD M      PD+  F+ L  GY +AG       +   M + G+  + + + T+I G+ 
Sbjct: 566 MFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFR 625

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
               +  A+ I+++M   G+ P+  T   +L G    ++  RA  +L+ ++
Sbjct: 626 KVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 162/351 (46%), Gaps = 18/351 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N  V +GK  EA  +++ ++     P+ +TY++++    +Q R  +   +       G 
Sbjct: 330 INAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGC 389

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I FN +I     +  VD+ +K+  +M ++G    T TY TLI G+  VG    +  
Sbjct: 390 SPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQD 449

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS-----------GIQPD 169
           LLQ M     V PN  T N L+   C    +++A  +   M  S           G++PD
Sbjct: 450 LLQEMIS-SGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPD 508

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
             TYN L       G+   AE++  EM +  + P+  T   ++ G CK+  +++A +   
Sbjct: 509 VQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 568

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWS 286
            M      P++V FN+LI G+     +  VD  L L   M + G+  D +T+ T++  + 
Sbjct: 569 SMGSKSFSPDVVTFNTLITGYC---KAGMVDDGLELFCEMGQRGIVADAITYITLIYGFR 625

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
               +    +IF +M+ +G+ PD      +  G     E ++A ++L  ++
Sbjct: 626 KVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 141/288 (48%), Gaps = 5/288 (1%)

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           +++A ++   MV S   P  + +  L     + G       +  +M+  ++  N  +  I
Sbjct: 62  LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTI 121

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++  +C    +  A+    ++ +L  HP +V FN+L+ G       D + +AL L  +  
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLC---VEDRISEALDLFHQM- 177

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
            KP+VVTF+T+M+     G + +   + D M++ G++P+   +  +  G  + G+   A 
Sbjct: 178 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 237

Query: 331 SILTSMRKYG-VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           ++L  M +   + PNVV++ T+I G     +   A +++ +M E  I P++ TY  ++ G
Sbjct: 238 NLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMING 297

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           +  + +   AE+LLQ M E+ + P   T   + +++   G   EA+ +
Sbjct: 298 FCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEEL 345



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 4/196 (2%)

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           SG+ +   ++DA+     M      P+++ F  L+   + +   D V      ME   + 
Sbjct: 54  SGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMP 113

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            +  +F+ +M  + S   +      F  + K G  P +  F+ L  G        +A  +
Sbjct: 114 CNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDL 173

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              M K    PNVV FTT+++G C   ++  A+++ ++M E G+ PN  TY T++ G  +
Sbjct: 174 FHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCK 229

Query: 393 AKQPWRAEELLQVMEE 408
                 A  LL+ MEE
Sbjct: 230 MGDTVSALNLLRKMEE 245


>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
          Length = 879

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 222/430 (51%), Gaps = 36/430 (8%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           I Y+ ++ A  +    +    L+ ++E+DG+     ++++M++  +   N ++ + +F++
Sbjct: 348 IIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFER 407

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           +K+ G KP+  +Y  L+  Y  +GK  ++L + + M +   +K N++TY++L+  +   +
Sbjct: 408 LKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEM-ESCGIKHNNKTYSMLINGFIHLH 466

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
               A+ +  +M+ SG+QPD   YN L  A+ + G   RA  +L +MQ  +++P+ R   
Sbjct: 467 DFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFR 526

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            I+ GY   G+M+ A+  L  M+     P ++ +N+LI G +           L  M   
Sbjct: 527 PIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIA 586

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH------------------ 311
           G+ P+  T++ IM  ++++G +GK  E F  + ++G++ D++                  
Sbjct: 587 GITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSA 646

Query: 312 -----------------VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
                            +++IL  G+ R G+  +AE ++  M++ GV PN+  +T+ I+ 
Sbjct: 647 LAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINA 706

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C A  MQRA  + E+M ++G+ PN+KTY TL+ G+     P RA +  + M+  G++P 
Sbjct: 707 CCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPD 766

Query: 415 KSTIQLVADS 424
           +++   +  S
Sbjct: 767 EASYHCLVTS 776



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 192/388 (49%), Gaps = 7/388 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+ V  GK  +A  I   +   G +    TY+ L+        F +  ++  ++ + G+
Sbjct: 424 LNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGL 483

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD  ++N +I A  + GN+D A+ I +KM+    +P+   +  +I+GY   G  + +L 
Sbjct: 484 QPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALD 543

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L LM +   V P   TYN L+     K+ ++ A +V+ KM  +GI P+  TY  + R Y
Sbjct: 544 TLDLMRRSGCV-PTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGY 602

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A  G+  +A +   +++ + ++ +      ++   CK G M+ A+     M   ++  N 
Sbjct: 603 AASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNT 662

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            ++N LI G+    D    +  +  M+E GV P++ T+++ ++A   AG M + +++ ++
Sbjct: 663 FIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEE 722

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV  G++P++  ++ L KG+ R   P +A      M+  G+ P+   +  +++   +   
Sbjct: 723 MVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRAT 782

Query: 361 MQRA------MSIYEKMCEIGINPNLKT 382
           +         +S+  +M E  +  +L+T
Sbjct: 783 VMEGSTYTGIISVCREMSENDLTVDLRT 810



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/451 (21%), Positives = 199/451 (44%), Gaps = 71/451 (15%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G++P++ +F ++++A + + ++  A+   ++MK  G + T  TY+ LI G+  +   + +
Sbjct: 272 GIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSA 331

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGI------------ 166
             L +  ++ K    N   Y+ ++ A C   ++E A  +V +M   GI            
Sbjct: 332 DNLFK-EAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMH 390

Query: 167 -----------------------QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
                                  +P  ++Y  L   Y + G+  +A  +  EM++  ++ 
Sbjct: 391 GYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKH 450

Query: 204 NERTCGIIVSG-----------------------------------YCKEGNMEDAMRFL 228
           N +T  ++++G                                   +CK GNM+ A+  L
Sbjct: 451 NNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICIL 510

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
            +M++  + P+   F  +I+G+    D       L LM   G  P V+T++ ++      
Sbjct: 511 EKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRK 570

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
             + +   + D M  AGI P+ H ++I+ +GY  +G+  KA    T +++ G+  +V ++
Sbjct: 571 HKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIY 630

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
            T++   C + +MQ A+++  +M    I  N   Y  L+ G+      W AE+L++ M+E
Sbjct: 631 ETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKE 690

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            GV P   T     ++    G  + A++V++
Sbjct: 691 DGVPPNIHTYTSYINACCKAGDMQRAEKVIE 721



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 158/344 (45%), Gaps = 46/344 (13%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  IF  ++  G +P    Y  L+ A  +       + ++ K++K+ M+P +  F  +I 
Sbjct: 471 AFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIE 530

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
             + +G++  A+     M+ SGC PT  TYN LI G     K + ++ +L  MS    + 
Sbjct: 531 GYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSI-AGIT 589

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA------------- 179
           PN+ TY I++R + +   I +A+    K+  SG++ D   Y TL RA             
Sbjct: 590 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 649

Query: 180 ----------------------YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
                                 +A+ G+ + AE ++ +M+ + V PN  T    ++  CK
Sbjct: 650 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCK 709

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
            G+M+ A + +  M ++ + PN+  + +LIKG+  +   D   K    M+  G+KPD  +
Sbjct: 710 AGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEAS 769

Query: 278 F----------STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
           +          +T+M+  +  G++  C+E+ ++ +   +   +H
Sbjct: 770 YHCLVTSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAVH 813



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 149/318 (46%), Gaps = 1/318 (0%)

Query: 96  KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
           KP+   +  +I  Y   G    +    + M + + ++PN   +  LV A+     +  A 
Sbjct: 239 KPSRREFGLMIVYYAKRGDKHHARATFENM-RARGIEPNAFVFTSLVHAYAVARDMRGAL 297

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
           + V +M + G++   VTY+ L   +A+  ++  A+ +  E +      N      I+  +
Sbjct: 298 SCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAH 357

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C+ GNME A   +  M+E  +   + V++S++ G+  I++ +        ++E G KP +
Sbjct: 358 CQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSI 417

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           +++  +++ +   G + K   I  +M   GI+ +   +S+L  G++   +   A +I   
Sbjct: 418 ISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEE 477

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M + G+ P+  ++  +I  +C    M RA+ I EKM +  + P+ + +  ++ GY  A  
Sbjct: 478 MLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGD 537

Query: 396 PWRAEELLQVMEEKGVRP 413
              A + L +M   G  P
Sbjct: 538 MKSALDTLDLMRRSGCVP 555



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/297 (21%), Positives = 130/297 (43%)

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
           W  V        +P    +  +   YA+ G+ + A      M+   + PN      +V  
Sbjct: 227 WQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHA 286

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           Y    +M  A+  +  MK   +   +V ++ LI GF  I DS   D      +      +
Sbjct: 287 YAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLN 346

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
            + +S I+ A   +G M + +E+  +M + GI+  I V+  +  GY       K   +  
Sbjct: 347 GIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFE 406

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            +++ G  P+++ +  +++ +    K+ +A+SI ++M   GI  N KTY  L+ G+    
Sbjct: 407 RLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLH 466

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
               A  + + M   G++P ++   L+ +++  +G    A  +L+  +++R    N+
Sbjct: 467 DFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNR 523


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 232/478 (48%), Gaps = 6/478 (1%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           ++  +G   +A  +F+ +I  G  P    Y +L+    R+K  +    L+ +++K  +  
Sbjct: 356 VMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
               +  ++     SG++D A  I ++M  SGC+P    Y TLIK +    +  +++++L
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           + M +++ + P+   YN L+        ++EA + + +MV +G++P+A TY      Y +
Sbjct: 476 KEM-KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
             E   A++ + EM+   V PN+  C  +++ YCK+G + +A      M +  +  +   
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +  L+ G       D  ++    M   G+ PDV ++  +++ +S  G M K   IFD+MV
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           + G+ P++ ++++L  G+ R+GE +KA+ +L  M   G+HPN V + T+I G+C +  + 
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A  ++++M   G+ P+   Y TL+ G        RA  +     +KG     +    + 
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPFNALI 773

Query: 423 DSWRAIG---LAREAKRVLKSAEEDRQSMPNKKD-EIAVESIHRKQNLSASNSTFLQI 476
           +     G   L  E    L     DR   PN     I ++ + ++ NL A+   F Q+
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 202/408 (49%), Gaps = 1/408 (0%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           TY+ L+  L + +   +   L+ ++   G+     +++  I   S+ G +++A  +F  M
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM 373

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
             SG  P    Y +LI+GY       +  +LL  M + +N+  +  TY  +V+  CS   
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK-RNIVISPYTYGTVVKGMCSSGD 432

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           ++ A+N+V +M+ASG +P+ V Y TL + + Q      A ++L EM+   + P+      
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++ G  K   M++A  FL  M E  + PN   + + I G+++  +    DK +  M E G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           V P+ V  + +++ +   G + +    +  MV  GI  D   +++L  G  +  +   AE
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            I   MR  G+ P+V  +  +I+G+     MQ+A SI+++M E G+ PN+  Y  LL G+
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             + +  +A+ELL  M  KG+ P   T   + D +   G   EA R+ 
Sbjct: 673 CRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 187/388 (48%), Gaps = 5/388 (1%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+ P    ++ +I+   +   +++A  +  +M   G      TY+ LI G    G+  ++
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK-GRNADA 330

Query: 119 LKLL--QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
            K L  +++S   N+KP    Y+  +     +  +E+A  +   M+ASG+ P A  Y +L
Sbjct: 331 AKGLVHEMVSHGINIKP--YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
              Y +     +  ++L EM+   +  +  T G +V G C  G+++ A   +  M     
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            PN+V++ +LIK FL         + L  M+E G+ PD+  +++++   S A  M + + 
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
              +MV+ G++P+   +     GY+ A E   A+  +  MR+ GV PN V+ T +I+ +C
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
              K+  A S Y  M + GI  + KTY  L+ G  +  +   AEE+ + M  KG+ P   
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEED 444
           +  ++ + +  +G  ++A  +     E+
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEE 656



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/474 (21%), Positives = 212/474 (44%), Gaps = 56/474 (11%)

Query: 2   NILVGKGKP---HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           ++++G  K     EA      ++E G +P   TY   ++       F S    + ++ + 
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+ P+ +L   +IN   + G V EA   ++ M D G      TY  L+ G     K +++
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
            ++ + M + K + P+  +Y +L+  +    ++++A ++  +MV  G+ P+ + YN L  
Sbjct: 612 EEIFREM-RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            + + GE  +A+++L EM    + PN  T   I+ GYCK G++ +A R    MK   + P
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLM-------------------------------- 266
           +  V+ +L+ G   + D   V++A+T+                                 
Sbjct: 731 DSFVYTTLVDGCCRLND---VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTE 787

Query: 267 ----------EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
                     + FG KP+ VT++ ++D     G +   +E+F  M  A + P +  ++ L
Sbjct: 788 VLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM----- 371
             GY + G   +   +       G+ P+ +M++ +I+ +       +A+ + ++M     
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST-IQLVADS 424
            + G   ++ T   LL G+ +  +   AE++++ M      P  +T I+L+ +S
Sbjct: 907 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINES 960



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 167/371 (45%), Gaps = 23/371 (6%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L    K  +A  IF  +  +G  P + +Y  L+   ++    +   S+  ++ ++G+
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I++N ++     SG +++A ++  +M   G  P   TY T+I GY   G   E+ +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M   K + P+   Y  LV   C  N +E A   ++     G       +N L    
Sbjct: 719 LFDEMKL-KGLVPDSFVYTTLVDGCCRLNDVERAIT-IFGTNKKGCASSTAPFNALINWV 776

Query: 181 AQYGETYRAEQMLFEMQNNQV----RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
            ++G+T    ++L  + +       +PN+ T  I++   CKEGN+E A    ++M+   +
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF------GVKPDVVTFSTIMDAWSSAGL 290
            P ++ + SL+ G+      D + +   +   F      G++PD + +S I++A+   G+
Sbjct: 837 MPTVITYTSLLNGY------DKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890

Query: 291 MGKCQEIFDDM-----VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
             K   + D M     V  G +  I     L  G+ + GE + AE ++ +M +    P+ 
Sbjct: 891 TTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDS 950

Query: 346 VMFTTVISGWC 356
                +I+  C
Sbjct: 951 ATVIELINESC 961



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/337 (24%), Positives = 151/337 (44%), Gaps = 36/337 (10%)

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
           NVD A+K+ + M   G  P   TY+ LI G   + + E++  LL  M     V  ++ TY
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDS-LGVSLDNHTY 315

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           ++L+       + + A  +V++MV+ GI      Y+      ++ G   +A+ +   M  
Sbjct: 316 SLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIA 375

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
           + + P  +    ++ GYC+E N+      L  MK+     N+V+                
Sbjct: 376 SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK----RNIVI---------------- 415

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
                         P   T+ T++    S+G +     I  +M+ +G  P++ +++ L K
Sbjct: 416 -------------SP--YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK 460

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
            +++      A  +L  M++ G+ P++  + ++I G   A +M  A S   +M E G+ P
Sbjct: 461 TFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP 520

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           N  TY   + GY EA +   A++ ++ M E GV P K
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 7/160 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G    A  +F+ +      PT+ITYT+L+    +  R   +  +  +    G+
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGI 871

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKM-----KDSGCKPTTSTYNTLIKGYGNVGKP 115
           +PD I+++ +INA  + G   +A+ +  +M      D GCK + ST   L+ G+  VG+ 
Sbjct: 872 EPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEM 931

Query: 116 EESLKLLQLMSQDKNVKPNDRTYNILVRAWC-SKNSIEEA 154
           E + K+++ M + + + P+  T   L+   C S N   EA
Sbjct: 932 EVAEKVMENMVRLQYI-PDSATVIELINESCISSNQRVEA 970



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 64/313 (20%), Positives = 118/313 (37%), Gaps = 67/313 (21%)

Query: 112 VGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAV 171
           V  P + L     +   K  +    +++ L    C+  S E+A +VV +M+     P A 
Sbjct: 74  VDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERN-WPVAE 132

Query: 172 TYNTLARAYAQY-GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
            ++++ R   ++ G++   + +LF              GI+  GY  +  +E+A+     
Sbjct: 133 VWSSIVRCSQEFVGKS--DDGVLF--------------GILFDGYIAKEYIEEAVFVFSS 176

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
              LE+ P L     L+   L                                 W+   L
Sbjct: 177 SMGLELVPRLSRCKVLLDALL--------------------------------RWNRLDL 204

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
                +++  MV+  +  D+  + +L   + RAG  Q  + +L    K         F T
Sbjct: 205 F---WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE--------FRT 253

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
                  A+K++ +M     +C+ G+ P   TY+ L+ G  + K+   A+ LL  M+  G
Sbjct: 254 ATLNVDGALKLKESM-----ICK-GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG 307

Query: 411 VRPKKSTIQLVAD 423
           V     T  L+ D
Sbjct: 308 VSLDNHTYSLLID 320


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 212/404 (52%), Gaps = 1/404 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++ +G +P L+TY  +V  L ++       +L++K+E+  ++P  +++N +I+   +  +
Sbjct: 7   MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 66

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D+A+ +F++M+  G +P   TY++LI    N G+  ++ +LL  M + K + P+  T++
Sbjct: 67  MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK-INPDVFTFS 125

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+ A+  +  + EA  +  +MV   I P  VTY++L   +  +     A+QM   M + 
Sbjct: 126 ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 185

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+  T   ++ G+CK   +E+ M     M +  +  N V +N LI+G     D D  
Sbjct: 186 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 245

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            +    M   GV P+++T++T++D     G + K   +F+ + ++ +EP I+ ++I+ +G
Sbjct: 246 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 305

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             +AG+ +    +  ++   GV P+VV + T+ISG+C     + A +++++M E G  PN
Sbjct: 306 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 365

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
              Y TL+           + EL++ M   G     STI LV +
Sbjct: 366 SGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 409



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 181/365 (49%), Gaps = 1/365 (0%)

Query: 49  LSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
           ++LI ++   G +PD + +  ++N   + G+ D A  +  KM+    +P    YNT+I G
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 109 YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP 168
                  +++L L + M + K ++PN  TY+ L+   C+     +A  ++  M+   I P
Sbjct: 61  LCKYKHMDDALNLFKEM-ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 119

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           D  T++ L  A+ + G+   AE++  EM    + P+  T   +++G+C    +++A +  
Sbjct: 120 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 179

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
             M      P++V +N+LIKGF   K  +   +    M + G+  + VT++ ++     A
Sbjct: 180 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 239

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
           G     QEIF +MV  G+ P+I  ++ L  G  + G+ +KA  +   +++  + P +  +
Sbjct: 240 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 299

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
             +I G C A K++    ++  +   G+ P++  Y T++ G+        A+ L + M+E
Sbjct: 300 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 359

Query: 409 KGVRP 413
            G  P
Sbjct: 360 DGTLP 364



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 179/367 (48%), Gaps = 2/367 (0%)

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           M +  +M   GC+P   TY  ++ G    G  + +  LL  M Q K ++P    YN ++ 
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK-LEPGVLIYNTIID 59

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C    +++A N+  +M   GI+P+ VTY++L      YG    A ++L +M   ++ P
Sbjct: 60  GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 119

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   ++  + KEG + +A +    M +  + P++V ++SLI GF      D   +  
Sbjct: 120 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 179

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M      PDVVT++T++  +     + +  E+F +M + G+  +   ++IL +G  +A
Sbjct: 180 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 239

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+   A+ I   M   GV PN++ + T++ G C   K+++AM ++E +    + P + TY
Sbjct: 240 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 299

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             ++ G  +A +     +L   +  KGV+P       +   +   G   EA  + K  +E
Sbjct: 300 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 359

Query: 444 DRQSMPN 450
           D  ++PN
Sbjct: 360 D-GTLPN 365



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 172/330 (52%), Gaps = 3/330 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F  +  +G RP ++TY++L++ L    R+     L+S + +  + PD   F+A+I
Sbjct: 69  DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 128

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +A  + G + EA K++ +M      P+  TY++LI G+    + +E+ ++ + M   K+ 
Sbjct: 129 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS-KHC 187

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  TYN L++ +C    +EE   V  +M   G+  + VTYN L +   Q G+   A++
Sbjct: 188 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 247

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  EM ++ V PN  T   ++ G CK G +E AM     ++  ++ P +  +N +I+G  
Sbjct: 248 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 307

Query: 252 DI-KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
              K  DG D    L  + GVKPDVV ++T++  +   G   +   +F +M + G  P+ 
Sbjct: 308 KAGKVEDGWDLFCNLSLK-GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 366

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYG 340
             ++ L +  +R G+ + +  ++  MR  G
Sbjct: 367 GCYNTLIRARLRDGDREASAELIKEMRSCG 396



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 152/317 (47%), Gaps = 1/317 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  +A  + + +IE    P + T++ L+ A  ++ +      L  ++ K  +
Sbjct: 93  ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 152

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + ++++IN       +DEA ++F+ M    C P   TYNTLIKG+    + EE ++
Sbjct: 153 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 212

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + MSQ + +  N  TYNIL++        + A  +  +MV+ G+ P+ +TYNTL    
Sbjct: 213 VFREMSQ-RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 271

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+  +A  +   +Q +++ P   T  I++ G CK G +ED       +    V P++
Sbjct: 272 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 331

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N++I GF      +  D     M+E G  P+   ++T++ A    G      E+  +
Sbjct: 332 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 391

Query: 301 MVKAGIEPDIHVFSILA 317
           M   G   D     ++ 
Sbjct: 392 MRSCGFAGDASTIGLVT 408



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 126/251 (50%), Gaps = 10/251 (3%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +F  ++ +   P ++TY TL+    + KR +  + +  ++ + G+  +++ +N +I
Sbjct: 174 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 233

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
               ++G+ D A +IF++M   G  P   TYNTL+ G    GK E+++ + + + + K +
Sbjct: 234 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK-M 292

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +P   TYNI++   C    +E+ W++   +   G++PD V YNT+   + + G    A+ 
Sbjct: 293 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 352

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE---------LEVHPNLVV 242
           +  EM+ +   PN      ++    ++G+ E +   +  M+          + +  N++ 
Sbjct: 353 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH 412

Query: 243 FNSLIKGFLDI 253
              L K FLD+
Sbjct: 413 DGRLDKSFLDM 423


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 212/431 (49%), Gaps = 8/431 (1%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G +P LIT   L+       +     S+++K+ K G  PD++  N +I      G V +
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKK 147

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+    K+   G +    +Y TLI G   +G    ++KLLQ +   +  KPN   Y+ ++
Sbjct: 148 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKID-GRLTKPNVVMYSTII 206

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
            A C    + EA+ +  +M   GI  D VTY+TL   +   G+   A  +L EM    + 
Sbjct: 207 DALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTIN 266

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL---DIKDSDGV 259
           PN  T  I+V   CKEG +++A   L  M +  V P+++ +++L+ G+    ++K +  V
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
             A++LM   GV PDV T++ +++ +    ++ +   +F +M +  + P I  +S L  G
Sbjct: 327 FNAMSLM---GVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG 383

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             ++G       ++  M   G   NV+ ++++I G C    + RA++++ KM + GI PN
Sbjct: 384 LCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPN 443

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             T+  LL G  +  +   A+E+ Q +  KG      T  ++ D     GL  EA  +L 
Sbjct: 444 TFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTML- 502

Query: 440 SAEEDRQSMPN 450
           S  ED   +P+
Sbjct: 503 SKMEDNGCIPD 513



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 198/381 (51%), Gaps = 1/381 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG+  +A +  + L+ +G +   ++Y TL+  + +    ++ + L+ K++    KP+ ++
Sbjct: 142 KGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVM 201

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +I+A  +   V EA  +F +M   G      TY+TLI G+   GK +E++ LL  M 
Sbjct: 202 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMV 261

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K + PN  TYNILV A C +  ++EA +V+  M+ + ++PD +TY+TL   Y    E 
Sbjct: 262 L-KTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEV 320

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A+ +   M    V P+  T  I+++G+CK   +++A+     M +  + P +V ++SL
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G         V   +  M + G   +V+T+S+++D     G + +   +F+ M   GI
Sbjct: 381 IDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGI 440

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+   F+IL  G  + G  + A+ +   +   G H NV  +  +I G C    ++ A++
Sbjct: 441 RPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALT 500

Query: 367 IYEKMCEIGINPNLKTYETLL 387
           +  KM + G  P+  T+E ++
Sbjct: 501 MLSKMEDNGCIPDAVTFEIII 521



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 138/281 (49%), Gaps = 7/281 (2%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  EA  + N ++ +   P + TY  LV AL ++ + K   S+++ + K  +KPD I 
Sbjct: 247 EGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +++       V +A  +F  M   G  P   TY  LI G+      +E+L L + M 
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           Q KN+ P   TY+ L+   C    I   W+++ +M   G   + +TY++L     + G  
Sbjct: 367 Q-KNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHL 425

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            RA  +  +M++  +RPN  T  I++ G CK G ++DA      +     H N+  +N +
Sbjct: 426 DRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVM 485

Query: 247 IKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDA 284
           I G         +++ALT+   ME+ G  PD VTF  I+ A
Sbjct: 486 IDGHCK---QGLLEEALTMLSKMEDNGCIPDAVTFEIIIIA 523



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 142/306 (46%)

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           +N ++ ++        A ++ +++   GIQPD +T N L   +   G+      +L ++ 
Sbjct: 62  FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
                P+  T   ++ G C +G ++ A+ F  ++       N V + +LI G   I D+ 
Sbjct: 122 KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTR 181

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
              K L  ++    KP+VV +STI+DA     L+ +   +F +M   GI  D+  +S L 
Sbjct: 182 AAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLI 241

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            G+   G+ ++A  +L  M    ++PNV  +  ++   C   K++ A S+   M +  + 
Sbjct: 242 YGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVK 301

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           P++ TY TL+ GY    +  +A+ +   M   GV P   T  ++ + +    +  EA  +
Sbjct: 302 PDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNL 361

Query: 438 LKSAEE 443
            K   +
Sbjct: 362 FKEMHQ 367



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 121/246 (49%), Gaps = 3/246 (1%)

Query: 23   EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
            +G +P L T   L+       +     S+++K+ K G  PD+I F  +IN     G V++
Sbjct: 955  KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 83   AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
            A+    K+   G +    +Y TLI G   +G    ++KLL+ +   +  KP+   YN ++
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKID-GRLTKPDVVMYNTII 1073

Query: 143  RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
             A C    + +A+ + ++M   GI  D VTYNTL   +   G+   A  +L +M    + 
Sbjct: 1074 DALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTIN 1133

Query: 203  PNERTCGIIVSGYCKEGN--MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
            PN RT  I+V   CKEG   +++++  L +M++     N V F  +I    +  ++D V+
Sbjct: 1134 PNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVE 1193

Query: 261  KALTLM 266
            K L  M
Sbjct: 1194 KLLHEM 1199



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 113/198 (57%), Gaps = 3/198 (1%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            +N L  KG+ ++A +  + L+ +G +   ++Y TL+  + +    ++ + L+ K++    
Sbjct: 1003 INGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLT 1062

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            KPD +++N +I+A  +   V +A  +F +M   G      TYNTLI G+  VGK +E++ 
Sbjct: 1063 KPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIG 1122

Query: 121  LLQLMSQDKNVKPNDRTYNILVRAWC--SKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
            LL  M   K + PN RTYNILV A C   K+ ++E+ +++ KM  +G + +AVT+  +  
Sbjct: 1123 LLNKMVL-KTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIIS 1181

Query: 179  AYAQYGETYRAEQMLFEM 196
            A  +  E  + E++L EM
Sbjct: 1182 ALFEKDENDKVEKLLHEM 1199



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 123/260 (47%), Gaps = 2/260 (0%)

Query: 154  AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
            A ++ +++   GIQPD  T N L   +   G+      +L ++      P+  T   +++
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 214  GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
            G C +G +  A+ F  ++       N V + +LI G   I D+    K L  ++    KP
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 274  DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
            DVV ++TI+DA     L+ K   +F +M   GI  D+  ++ L  G+   G+ ++A  +L
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 334  TSMRKYGVHPNVVMFTTVISGWCNAVK--MQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
              M    ++PNV  +  ++   C   K  +  ++S+  KM + G   N  T+E ++    
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184

Query: 392  EAKQPWRAEELLQVMEEKGV 411
            E  +  + E+LL  M  +G+
Sbjct: 1185 EKDENDKVEKLLHEMIARGL 1204



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 127/268 (47%), Gaps = 7/268 (2%)

Query: 43   KRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTY 102
            K + + +SL  ++E  G++PD    N +IN     G +     I  K+   G  P T T+
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 103  NTLIKGYGNVGKPEESLKLL-QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
             TLI G    G+  ++L    +L++Q    + N  +Y  L+   C       A  ++ K+
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQ--GFQLNQVSYGTLINGVCKIGDTRAAIKLLRKI 1057

Query: 162  VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM 221
                 +PD V YNT+  A  ++    +A  + FEM    +  +  T   ++ G+C  G +
Sbjct: 1058 DGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKL 1117

Query: 222  EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTF 278
            ++A+  L +M    ++PN+  +N L+      +  D +D++L++   ME+ G K + VTF
Sbjct: 1118 KEAIGLLNKMVLKTINPNVRTYNILVDALCK-EGKDLLDESLSMLSKMEDNGCKANAVTF 1176

Query: 279  STIMDAWSSAGLMGKCQEIFDDMVKAGI 306
              I+ A        K +++  +M+  G+
Sbjct: 1177 EIIISALFEKDENDKVEKLLHEMIARGL 1204



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 6/261 (2%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NILV     +GK  EA  +   +++   +P +ITY+TL+         K    + + +  
Sbjct: 273 NILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL 332

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+ PD   +  +IN   ++  VDEA+ +F++M      P   TY++LI G    G+   
Sbjct: 333 MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPY 392

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
              L+  M  D+    N  TY+ L+   C    ++ A  +  KM   GI+P+  T+  L 
Sbjct: 393 VWDLIDEM-HDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILL 451

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               + G    A+++  ++       N  T  +++ G+CK+G +E+A+  L +M++    
Sbjct: 452 DGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCI 511

Query: 238 PNLVVFNSLIKGFLDIKDSDG 258
           P+ V F  +I      KD +G
Sbjct: 512 PDAVTFEIIIIALFK-KDENG 531



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 5/218 (2%)

Query: 224  AMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD 283
            A+   +R++   + P+L   N LI  F  +         L  + + G  PD +TF+T+++
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 284  AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
                 G + K     D ++  G + +   +  L  G  + G+ + A  +L  +      P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 344  NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
            +VVM+ T+I   C    + +A  ++ +M   GI+ ++ TY TL++G+    +   A  LL
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 404  QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
              M  K + P   T  ++ D+     L +E K +L  +
Sbjct: 1125 NKMVLKTINPNVRTYNILVDA-----LCKEGKDLLDES 1157



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 108/254 (42%), Gaps = 35/254 (13%)

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
           N++DA+    RM  +   P ++ FN ++  F  +K           +E  G++PD++T +
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA---------- 329
            +++ +   G +     +   ++K G  PD    + L KG    G+ +KA          
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 330 ---------ESILTSMRKYG----------------VHPNVVMFTTVISGWCNAVKMQRA 364
                     +++  + K G                  PNVVM++T+I   C    +  A
Sbjct: 159 GFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEA 218

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             ++ +M   GI+ ++ TY TL++G+    +   A  LL  M  K + P   T  ++ D+
Sbjct: 219 YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278

Query: 425 WRAIGLAREAKRVL 438
               G  +EAK VL
Sbjct: 279 LCKEGKVKEAKSVL 292



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 7/117 (5%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G    A  +FN + ++G RP   T+T L+  L +  R K    +   +   G   +
Sbjct: 419 LCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLN 478

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLI-------KGYGNVG 113
              +N MI+   + G ++EA+ +  KM+D+GC P   T+  +I       +  GNVG
Sbjct: 479 VYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDENGGNVG 535


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 197/410 (48%), Gaps = 4/410 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   GK   AH +   + E   RP+  TY TL++ L +Q+       L+ +    G 
Sbjct: 303 MDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGF 362

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + ++ + +   + G +DEA ++ ++M   GC P   TYNTLI G     K E++ +
Sbjct: 363 VPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYE 422

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ +     V P+  TY I+V   C +  +++A  +V  M+  G  P  +TY  L    
Sbjct: 423 LLESLVSSGFV-PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGL 481

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A  +  EM +     +      +V+GYCK    ++A + +  ++     P +
Sbjct: 482 CRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT---PYI 538

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            V+N+L+ G+      D +      M   G  P++ T++ +MD     G + +     + 
Sbjct: 539 DVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLES 598

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M  AG  PD+  ++I+  G  +A +P++A  +L  M + G+ P+ V + T+++ +C   +
Sbjct: 599 MHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 658

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
              A+ I + M + G++P+  TY TL+ G  +  +   A EL+  M   G
Sbjct: 659 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNG 708



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 196/415 (47%), Gaps = 10/415 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P  I Y  ++    R+      L  + ++ +  + PD   +N +I+   ++   D+A ++
Sbjct: 224 PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEM 283

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M D G  P T T+N+++ G    GK E +  LL +M++ +N +P+  TYN L+   C
Sbjct: 284 LHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAE-RNCRPSCCTYNTLISGLC 342

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            + +++ A ++V + V+SG  PD VTY+ LA    + G    A +++ EM      PN  
Sbjct: 343 KQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLV 402

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   ++ G CK    E A   L  +      P++V +  ++ G         +DKAL ++
Sbjct: 403 TYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCK---EGRLDKALKMV 459

Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           E     G  P V+T++ +M+     G + +   IF +MV      D   +  L  GY ++
Sbjct: 460 EGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKS 519

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
              ++A+ ++  +R     P + ++  ++ G+C   ++    +++E M   G  PN+KTY
Sbjct: 520 SRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTY 576

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             ++ G  +  +   A   L+ M   G  P   +  ++ D        +EA++VL
Sbjct: 577 NIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVL 631



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 197/433 (45%), Gaps = 13/433 (3%)

Query: 10  PHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNA 69
           P  A   F    + G + +  T    +  L        I ++  ++   G  PDS  ++ 
Sbjct: 106 PQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHL 165

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK 129
           +I +  +   +D+A  +  K K  G KP  S Y  L + +   G+ +++L++       +
Sbjct: 166 VIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIF------R 219

Query: 130 NV-KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           N+  P+   YN ++   C KN  + A   + +M    + PD  TYN L     +  +T +
Sbjct: 220 NIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDK 279

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A +ML EM +  V P+  T   I+ G CK G  E A   L  M E    P+   +N+LI 
Sbjct: 280 ASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLIS 339

Query: 249 GFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           G    ++   VD+A  L++EF   G  PDVVT+S + D     G + +  E+  +M   G
Sbjct: 340 GLCKQQN---VDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKG 396

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
             P++  ++ L  G  +A + +KA  +L S+   G  P+VV +T ++ G C   ++ +A+
Sbjct: 397 CTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKAL 456

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            + E M + G  P++ TY  L+ G     +   A  + + M  K           + + +
Sbjct: 457 KMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGY 516

Query: 426 RAIGLAREAKRVL 438
                 +EA++V+
Sbjct: 517 CKSSRTKEAQKVV 529



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 99/407 (24%), Positives = 203/407 (49%), Gaps = 11/407 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +  L+  G       +F  +++ G+ P   TY  ++ +L +  +     +++ K +  G 
Sbjct: 132 LQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGF 191

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP+  ++  +  A  ++G + +A++IF+ +      P    YN +I G+      + +L+
Sbjct: 192 KPEVSVYTILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDCDGALE 247

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L+ M++ K V P+  TYNIL+   C  +  ++A  ++++MV  G+ PD VT+N++    
Sbjct: 248 FLKEMNERK-VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGL 306

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+  RA  +L  M     RP+  T   ++SG CK+ N++ A   +         P++
Sbjct: 307 CKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDV 366

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V ++ L  G         +D+A  L++E    G  P++VT++T++D    A    K  E+
Sbjct: 367 VTYSILADGLC---KRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYEL 423

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            + +V +G  PD+  ++I+  G  + G   KA  ++  M K G  P+V+ +T ++ G C 
Sbjct: 424 LESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCR 483

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
             ++  A  I+++M       +   Y +L+ GY ++ +   A++++ 
Sbjct: 484 TGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD 530



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 192/423 (45%), Gaps = 20/423 (4%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +P +  YT L  A  +  R K  L +   +      PD+I +NA+I+      + D A
Sbjct: 190 GFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAIIHGHCRKNDCDGA 245

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           ++  ++M +    P   TYN LI G     K +++ ++L  M  D+ V P+  T+N ++ 
Sbjct: 246 LEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMV-DRGVTPDTVTFNSIMD 304

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C     E A +++  M     +P   TYNTL     +     RA+ ++ E  ++   P
Sbjct: 305 GLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVP 364

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T  I+  G CK G +++A   +  M      PNLV +N+LI G      +   +KA 
Sbjct: 365 DVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCK---ASKTEKAY 421

Query: 264 TLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
            L+E     G  PDVVT++ I+D     G + K  ++ + M+K G  P +  ++ L +G 
Sbjct: 422 ELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGL 481

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            R G   +A  I   M       + + + ++++G+C + + + A  + +    I   P +
Sbjct: 482 CRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDG---IRGTPYI 538

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEE---KGVRPKKSTIQLVADSWRAIGLAREAKRV 437
             Y  L+ GY    +  R +E+  V E+   +G  P   T  +V D     G   EA   
Sbjct: 539 DVYNALMDGYC---KEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPF 595

Query: 438 LKS 440
           L+S
Sbjct: 596 LES 598



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 199/414 (48%), Gaps = 4/414 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L    K  +A  + + +++ G  P  +T+ +++  L +  +F+   SL++ + +   +P 
Sbjct: 271 LCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPS 330

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +N +I+   +  NVD A  +  +   SG  P   TY+ L  G    G+ +E+ +L++
Sbjct: 331 CCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVK 390

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            MS  K   PN  TYN L+   C  +  E+A+ ++  +V+SG  PD VTY  +     + 
Sbjct: 391 EMS-GKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKE 449

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G   +A +M+  M      P+  T   ++ G C+ G +++A      M   +   + + +
Sbjct: 450 GRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAY 509

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            SL+ G+     S    +A  +++     P +  ++ +MD +   G + +   +F+DM  
Sbjct: 510 VSLVNGYCK---SSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMAC 566

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G  P+I  ++I+  G  + G+  +A   L SM   G  P+VV +  +I G   A K + 
Sbjct: 567 RGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKE 626

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           A  + ++M + GI P+  TY TL+  + + ++   A  +L+ M + GV P   T
Sbjct: 627 ARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVT 680



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 184/381 (48%), Gaps = 5/381 (1%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G K  +   N  +    E+G+ D    +F++M D+G  P + TY+ +IK    + + +++
Sbjct: 120 GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKA 179

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
             +L   ++ +  KP    Y IL RA+C    +++A  + ++ + S   PDA+ YN +  
Sbjct: 180 FTMLD-KAKVRGFKPEVSVYTILTRAFCKTGRLKDALEI-FRNIPS---PDAIAYNAIIH 234

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            + +  +   A + L EM   +V P+  T  I++ G CK    + A   L+ M +  V P
Sbjct: 235 GHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTP 294

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           + V FNS++ G       +     L +M E   +P   T++T++        + + +++ 
Sbjct: 295 DTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLV 354

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           D+ V +G  PD+  +SILA G  + G   +A  ++  M   G  PN+V + T+I G C A
Sbjct: 355 DEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKA 414

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            K ++A  + E +   G  P++ TY  ++ G  +  +  +A ++++ M ++G  P   T 
Sbjct: 415 SKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITY 474

Query: 419 QLVADSWRAIGLAREAKRVLK 439
             + +     G   EA  + K
Sbjct: 475 TALMEGLCRTGRVDEAHHIFK 495



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 190/386 (49%), Gaps = 13/386 (3%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P +  Y  L+    ++ R   I ++   +   G  P+   +N +++   + G VDEA   
Sbjct: 536 PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPF 595

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            + M  +GC P   +YN +I G     KP+E+ ++L  M Q   + P+  TYN L+  +C
Sbjct: 596 LESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQ-AGIPPDAVTYNTLMAQFC 654

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM-QNNQVRPNE 205
            +   ++A  ++  M+ +G+ PD VTYNTL    +Q      A +++ EM +N  V    
Sbjct: 655 KEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSAC 714

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG-VDKALT 264
            T   I+   CKEG ++ A+  +  M    V  N V +N     F+D    +G +D+A +
Sbjct: 715 TTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNI----FIDRLCKEGRLDEASS 770

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA-GIEPDIHVFSILAKGYVRA 323
           L+ E     D V+++T++     A  + +  ++  +MV   G+    H F++L   + + 
Sbjct: 771 LLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKT 830

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
               +A ++L  M + G  P+V+ +  VI+  C   K+ +A  ++++M   GI  +  +Y
Sbjct: 831 KRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSY 890

Query: 384 ETLLWGY-GEAKQPWRAEELLQVMEE 408
             L++G  G+     R +E LQV+EE
Sbjct: 891 TVLIYGLCGQG----RGKEALQVLEE 912



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/508 (23%), Positives = 210/508 (41%), Gaps = 79/508 (15%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L    K  +A+ +   L+  G  P ++TYT +V  L ++ R    L ++  + K G  P 
Sbjct: 411 LCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPS 470

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCK--------------------------- 96
            I + A++     +G VDEA  IF++M    C                            
Sbjct: 471 VITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD 530

Query: 97  -----PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
                P    YN L+ GY   G+ +E   + + M+  +   PN +TYNI++   C    +
Sbjct: 531 GIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMAC-RGCVPNIKTYNIVMDGLCKHGKV 589

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           +EA+  +  M ++G  PD V+YN +     +  +   A Q+L +M    + P+  T   +
Sbjct: 590 DEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTL 649

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF-- 269
           ++ +CKE   +DA+  L  M +  V P+ V +N+LI G   +  ++ +  A  LM E   
Sbjct: 650 MAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISG---LSQTNRLGDAYELMHEMLR 706

Query: 270 --GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
              V     T++TI+D     G + +   + D M   G+E +   ++I      + G   
Sbjct: 707 NGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLD 766

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI------------- 374
           +A S+L+ M       + V +TTVI G C A ++ RA  +  +M  +             
Sbjct: 767 EASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLL 823

Query: 375 -----------------------GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
                                  G +P++ TY  ++    +  +  +A EL   M  +G+
Sbjct: 824 IDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGI 883

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLK 439
                +  ++       G  +EA +VL+
Sbjct: 884 VASSVSYTVLIYGLCGQGRGKEALQVLE 911



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 152/339 (44%), Gaps = 8/339 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   GK  EA      +   G  P +++Y  ++  L +  + K    ++ ++ + G+
Sbjct: 580 MDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGI 639

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD++ +N ++    +    D+A+ I + M  +G  P   TYNTLI G     +  ++ +
Sbjct: 640 PPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYE 699

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L+  M ++  V     TYN ++   C +  +++A  ++  M   G++ + VTYN      
Sbjct: 700 LMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRL 759

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM---KELEVH 237
            + G    A  +L EM   +   +E +   ++ G CK   ++ A +    M   K L + 
Sbjct: 760 CKEGRLDEASSLLSEMDTLR---DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCIT 816

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
            +   FN LI  F   K  D     L LM + G  P V+T++ ++        + K  E+
Sbjct: 817 SH--TFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWEL 874

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           FD+M   GI      +++L  G    G  ++A  +L  M
Sbjct: 875 FDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 5/203 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G   +A  + + +   G     +TY   +  L ++ R     SL+S  E D ++ D
Sbjct: 724 LCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLS--EMDTLR-D 780

Query: 64  SILFNAMINACSESGNVDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
            + +  +I    ++  +D A K+ ++M    G   T+ T+N LI  +    + +E+L LL
Sbjct: 781 EVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLL 840

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
            LM Q +   P+  TYN+++   C  + +++AW +  +M   GI   +V+Y  L      
Sbjct: 841 GLMVQ-RGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCG 899

Query: 183 YGETYRAEQMLFEMQNNQVRPNE 205
            G    A Q+L EM ++    ++
Sbjct: 900 QGRGKEALQVLEEMASSDCEIDD 922


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 197/407 (48%), Gaps = 1/407 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   EA  +   ++  G +P  ITY  LV  L +  +      L+ ++ +D  +PD+I 
Sbjct: 362 EGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 421

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I       +  +A ++  +M+++G  P   TY+ +I G    G+PE++  LL+ M+
Sbjct: 422 YNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 481

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K +KPN   Y  L+  +C + ++  A  +  KM    + PD   YN+L    ++ G  
Sbjct: 482 T-KGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRV 540

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             + +   +MQ   + PNE T   ++ GY K G++E A + + RM +  + PN V++  L
Sbjct: 541 EESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDL 600

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           ++ +    D + V      M + GV  D   +  ++   SS+G M     +   + K G 
Sbjct: 601 LESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGS 660

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD+HV+S L  G  +  + +KA  IL  M K GV PN+V +  +I G C +  +  A +
Sbjct: 661 VPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARN 720

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           ++  +   G+ PN  TY +L+ G  +      A  L   M   G+ P
Sbjct: 721 VFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITP 767



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 216/434 (49%), Gaps = 8/434 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G  P + TY+TL+ A  + + F +   ++ ++ + G   +++ +N +I     SG 
Sbjct: 235 MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGA 294

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V+EA    + M+D G  P   TY  LI G     +  E+  LL  MS    +KPN   Y 
Sbjct: 295 VEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC-AELKPNVVVYA 353

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+  +  + + +EA+ ++ +MVA+G+QP+ +TY+ L R   + G+  RA  +L +M  +
Sbjct: 354 NLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRD 413

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
             RP+  T  +I+ G+ +  + +DA R L  M+   + PN+  ++ +I G      S   
Sbjct: 414 SHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLC---QSGEP 470

Query: 260 DKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           +KA  L+EE    G+KP+   ++ ++  +   G +    EIFD M K  + PD++ ++ L
Sbjct: 471 EKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSL 530

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G  + G  +++      M++ G+ PN   ++ +I G+     ++ A  + ++M + G+
Sbjct: 531 IFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 590

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            PN   Y  LL  Y ++    +     + M ++GV        ++  +  + G    A R
Sbjct: 591 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 650

Query: 437 VLKSAEEDRQSMPN 450
           VL   E++  S+P+
Sbjct: 651 VLSGIEKN-GSVPD 663



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/441 (24%), Positives = 215/441 (48%), Gaps = 36/441 (8%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P   TY  L+  L + +R     +L+ ++    +KP+ +++  +I+     GN DEA
Sbjct: 309 GLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEA 368

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            K+ ++M  +G +P   TY+ L++G   +G+ + +  LL+ M +D + +P+  TYN+++ 
Sbjct: 369 FKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH-RPDTITYNLIIE 427

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
                +S ++A+ ++ +M  +GI P+  TY+ +     Q GE  +A  +L EM    ++P
Sbjct: 428 GHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKP 487

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N      ++SGYC+EGN+  A     +M ++ V P+L  +NSLI G   +   +   K  
Sbjct: 488 NAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYF 547

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M+E G+ P+  T+S ++  +   G +   +++   M+  G++P+  ++  L + Y ++
Sbjct: 548 AQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKS 607

Query: 324 GEPQKAESILTSM---------RKYG--VH------------------------PNVVMF 348
            + +K  S   SM         R YG  +H                        P+V ++
Sbjct: 608 DDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVY 667

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           +++ISG C     ++A  I ++M + G++PN+  Y  L+ G  ++     A  +   +  
Sbjct: 668 SSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILA 727

Query: 409 KGVRPKKSTIQLVADSWRAIG 429
           KG+ P   T   + D    +G
Sbjct: 728 KGLVPNCVTYTSLIDGSCKVG 748



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 218/465 (46%), Gaps = 16/465 (3%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           I   L + GHR   +    LV    +  R +    ++  +   GM P     NA++    
Sbjct: 162 IHRALSDSGHRSPAV-LDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLL 220

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
            +  +    K+ + M  +G  P   TY+TLI+ Y  V + + + K+L  M +++    N 
Sbjct: 221 RADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEM-RERGCGLNT 279

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TYN+L+   C   ++EEA+     M   G+ PD  TY  L     +   +  A+ +L E
Sbjct: 280 VTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDE 339

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M   +++PN      ++ G+ +EGN ++A + +  M    V PN + +++L++G   +  
Sbjct: 340 MSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQ 399

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D     L  M     +PD +T++ I++             +  +M  AGI P+++ +SI
Sbjct: 400 MDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSI 459

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           +  G  ++GEP+KA  +L  M   G+ PN  ++  +ISG+C    +  A  I++KM ++ 
Sbjct: 460 MIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN 519

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           + P+L  Y +L++G  +  +   + +    M+E+G+ P + T   +   +   G      
Sbjct: 520 VLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNG------ 573

Query: 436 RVLKSAEEDRQSM------PNKKDEI-AVESIHRKQNLSASNSTF 473
             L+SAE+  Q M      PN    I  +ES  +  ++   +STF
Sbjct: 574 -DLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 617



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 191/406 (47%), Gaps = 2/406 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+P +A  +   +  +G +P    Y  L++   R+        +  K+ K  + PD
Sbjct: 464 LCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 523

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +N++I   S+ G V+E+ K F +M++ G  P   TY+ LI GY   G  E + +L+Q
Sbjct: 524 LYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQ 583

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D  +KPND  Y  L+ ++   + IE+  +    M+  G+  D   Y  L    +  
Sbjct: 584 RM-LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 642

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A ++L  ++ N   P+      ++SG CK  + E A   L  M +  V PN+V +
Sbjct: 643 GNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCY 702

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+LI G     D          +   G+ P+ VT+++++D     G +     ++++M+ 
Sbjct: 703 NALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLA 762

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GI PD  V+S+L  G   AG+ ++A  ++  M   G H ++  F  ++ G+C   KMQ 
Sbjct: 763 TGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQE 821

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
            + +   +   G+ PN  T E ++ G  EA +      +   +++K
Sbjct: 822 TLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 867



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/378 (19%), Positives = 151/378 (39%), Gaps = 58/378 (15%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G    A  + + + + G  P +  Y++L++ L +    +    ++ ++ K G+ P+
Sbjct: 639 LSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPN 698

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +NA+I+   +SG++  A  +F  +   G  P   TY +LI G   VG          
Sbjct: 699 IVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVG---------- 748

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
                                      I  A+ +  +M+A+GI PDA  Y+ L    +  
Sbjct: 749 --------------------------DISNAFYLYNEMLATGITPDAFVYSVLTTGCSSA 782

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGI--IVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           G+    EQ +F ++   +R +        +V G+CK G M++ ++ L+ +    + PN +
Sbjct: 783 GDL---EQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 839

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
              ++I G                + E G   +V T    +   +S         +F DM
Sbjct: 840 TIENIISG----------------LSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDM 883

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           +  G  P + V   + + + + G   KA  +   +           +  ++   C   K+
Sbjct: 884 INQGKIP-LDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKL 942

Query: 362 QRAMSIYEKMCEIGINPN 379
             A+++ ++M + GI P+
Sbjct: 943 SEALNLLKEMDKRGICPS 960


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 209/438 (47%), Gaps = 8/438 (1%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +PH A  + N +  +G   + + Y T++     +        L  ++   G+ PD + FN
Sbjct: 161 RPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFN 220

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I+     G+V E+ ++  K+   G  P   T N  I+G+       E+++LL      
Sbjct: 221 KLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLD--GVG 278

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           + + P+  TYN L+   C    + EA + + KMV  G +PD  TYN++   Y + G    
Sbjct: 279 RGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQN 338

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A+Q+L +       P+E T   +++G C++G+++ A+       E  + PNLV+ N+L+K
Sbjct: 339 ADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVK 398

Query: 249 GFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           G   +     + +AL LM E    G  PD+ T++ +++     G +     +  D +  G
Sbjct: 399 G---LSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKG 455

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
             PD+  F+ L  GY +  +   A  I+  M  +GV P+V+ + ++++G C A K +  M
Sbjct: 456 HLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVM 515

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
             ++ M E G  PN+ TY  L   + +A++   A  L++ M+ KG+ P       +   +
Sbjct: 516 GTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGF 575

Query: 426 RAIGLAREAKRVLKSAEE 443
              G    A ++ K  +E
Sbjct: 576 CDNGDLDGAYQLFKRVDE 593



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 211/430 (49%), Gaps = 3/430 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  KG   E+  + N +++ G  P L T    +    ++      + L+  V + G+
Sbjct: 223 IHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGR-GL 281

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I +N +I    ++  V EA    +KM + G +P   TYN++I GY  +G  + + +
Sbjct: 282 TPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQ 341

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+     K   P++ TY  L+   C    I+ A NV  + +  G++P+ V  NTL +  
Sbjct: 342 ILR-DGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGL 400

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           +Q G   +A +++ EM  N   P+  T  ++++G CK G + DA   +         P++
Sbjct: 401 SQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDV 460

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FN+LI G+      D   + +  M   GV PDV+T+++I++    AG        F  
Sbjct: 461 FTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKL 520

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M++ G  P+I  ++IL + + +A + ++A +++  M+  G+ P+VV F T++ G+C+   
Sbjct: 521 MMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGD 580

Query: 361 MQRAMSIYEKMCE-IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           +  A  +++++ E    +  + TY  ++  +        AE+L   M E G  P   T +
Sbjct: 581 LDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYR 640

Query: 420 LVADSWRAIG 429
           ++ D +   G
Sbjct: 641 VMIDGFCKTG 650



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 222/446 (49%), Gaps = 11/446 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MNILV      +AH ++  + ++G  P + T+T  + +  R  R  +   L++ +   G 
Sbjct: 118 MNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGC 177

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +  ++ +  +I    E  +  EA ++F++M   G  P    +N LI      G  +ES +
Sbjct: 178 ESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESER 237

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  + + + V PN  T NI ++ +C +  + EA  ++   V  G+ PD +TYNTL    
Sbjct: 238 LLNKVLK-RGVSPNLFTVNIFIQGFCQRAMLNEAIRLL-DGVGRGLTPDVITYNTLICGL 295

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +   AE  L +M N    P+  T   I+ GYCK G M++A + L         P+ 
Sbjct: 296 CKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDE 355

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             + SLI G    +D D +D+A+ +  E    G+KP++V  +T++   S  GL+ +  ++
Sbjct: 356 STYCSLINGL--CQDGD-IDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKL 412

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            ++M + G  PDI  ++++  G  + G    A++++      G  P+V  F T+I G+C 
Sbjct: 413 MNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCK 472

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            +K+  A+ I ++M   G++P++ TY ++L G  +A +        ++M EKG  P   T
Sbjct: 473 KLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIIT 532

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEE 443
             ++ +S+     AR+ +  L   EE
Sbjct: 533 YNILTESFCK---ARKVEEALNLIEE 555



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 193/418 (46%), Gaps = 12/418 (2%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA +    ++ EG+ P   TY +++    +    ++   ++      G  PD   + ++I
Sbjct: 303 EAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLI 362

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N   + G++D A+ +F +  + G KP     NTL+KG    G   ++LKL+  MS++   
Sbjct: 363 NGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSEN-GC 421

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  TYN+++   C    + +A N+V   +A G  PD  T+NTL   Y +  +   A +
Sbjct: 422 SPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIE 481

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           ++  M N+ V P+  T   I++G CK G  ED M     M E    PN++ +N L + F 
Sbjct: 482 IVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFC 541

Query: 252 DIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIF---DDMVKAG 305
             +    V++AL L+EE    G+ PDVV F T+M  +   G +    ++F   D+  K  
Sbjct: 542 KARK---VEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYK-- 596

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
               I  ++I+   +        AE +   M + G  P+   +  +I G+C    +    
Sbjct: 597 FSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGY 656

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           S      E G+ P+L T+  +L      ++   A  ++ +M  KG+ P+       AD
Sbjct: 657 SFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVNTIFEAD 714



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 209/442 (47%), Gaps = 20/442 (4%)

Query: 10  PHEAHYIFNCLI-EEGHRPTLITYTTLVAALTRQKRFKSILSLI--SKVEKDGMKPDSIL 66
           P +A  IFN +  E+G + TL+TY  ++  L     F+++  ++  +++  D    + + 
Sbjct: 20  PLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGVY 79

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
             AM N     G + EA+ +F++M    C+P+  +YN ++         +++ K+   M 
Sbjct: 80  IGAMRNY-GRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRM- 137

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +DK + P+  T+ I ++++C  +    A  ++  M + G +  AV Y T+   + +    
Sbjct: 138 RDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHR 197

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++  EM    + P+      ++   C++G+++++ R L ++ +  V PNL   N  
Sbjct: 198 VEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIF 257

Query: 247 IKGFLD-------IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           I+GF         I+  DGV + LT        PDV+T++T++        + + +    
Sbjct: 258 IQGFCQRAMLNEAIRLLDGVGRGLT--------PDVITYNTLICGLCKNFKVVEAEHYLR 309

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            MV  G EPD   ++ +  GY + G  Q A+ IL      G  P+   + ++I+G C   
Sbjct: 310 KMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDG 369

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
            + RA++++ +  E G+ PNL    TL+ G  +     +A +L+  M E G  P   T  
Sbjct: 370 DIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYN 429

Query: 420 LVADSWRAIGLAREAKRVLKSA 441
           LV +    IG   +A  ++  A
Sbjct: 430 LVINGLCKIGCVSDADNLVIDA 451



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 89/414 (21%), Positives = 176/414 (42%), Gaps = 9/414 (2%)

Query: 36  VAALTR-QKRFKSILSLISKVEK-DGMKPDSILFNAMINACSESGNVDEAMKIFQKMK-- 91
           VAA+ + QK     L + + V+K DG K   + +  MI      G  +   ++  + +  
Sbjct: 10  VAAVVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMN 69

Query: 92  -DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
            D+G       Y   ++ YG  GK +E++ + + M    N +P+ ++YN ++        
Sbjct: 70  IDNGL--LEGVYIGAMRNYGRKGKIQEAVDVFERMDF-FNCEPSVQSYNAIMNILVEYRY 126

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
            ++A  V  +M   GI PD  T+    +++ +    + A ++L  M +     +      
Sbjct: 127 FDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCT 186

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++ G+ +E +  +A      M  L + P+++ FN LI            ++ L  + + G
Sbjct: 187 VIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRG 246

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           V P++ T +  +  +    ++ +   + D  V  G+ PD+  ++ L  G  +  +  +AE
Sbjct: 247 VSPNLFTVNIFIQGFCQRAMLNEAIRLLDG-VGRGLTPDVITYNTLICGLCKNFKVVEAE 305

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
             L  M   G  P+   + ++I G+C    MQ A  I       G  P+  TY +L+ G 
Sbjct: 306 HYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGL 365

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
            +     RA  +     EKG++P       +       GL  +A +++    E+
Sbjct: 366 CQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSEN 419



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 39/215 (18%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  +    F  ++E+G  P +ITY  L  +  + ++ +  L+LI +++  G+
Sbjct: 502 LNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGL 561

Query: 61  KPDSILF------------------------------------NAMINACSESGNVDEAM 84
            PD + F                                    N MINA +   N++ A 
Sbjct: 562 TPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAE 621

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
           K+F KM ++G  P + TY  +I G+   G        L L+  +K + P+  T+  ++  
Sbjct: 622 KLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFL-LVKIEKGLIPSLTTFGRVLNC 680

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            C K  + EA  +++ MV  GI P+ V  NT+  A
Sbjct: 681 LCLKRRVHEAVGIIHLMVHKGIVPEVV--NTIFEA 713


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 220/446 (49%), Gaps = 10/446 (2%)

Query: 1   MNILVGKGKPHEAHY---IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           +N LV     H   +    FN  I+ G  P + T+  ++     + +FK  +  ++ + K
Sbjct: 177 LNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGK 236

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
               PD++ +N +++A  + G + +A  +   MK  G  P  +TYN L+ GY  +G  +E
Sbjct: 237 YNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKE 296

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +  +++LM+Q+ N+ P+  TYN+L+   C++  IEEA+ +  +M    + PD V+YNTL 
Sbjct: 297 AANVIELMTQN-NLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLI 355

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               ++ +   A ++L EM    V+PN  T  I+V  YCKEG M+DA   + +M+E    
Sbjct: 356 NGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFS 415

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG---VKPDVVTFSTIMDAWSSAGLMGKC 294
           P+ V +N+LI G+     +  + +A   M+E G   +K D VT +TI+        + + 
Sbjct: 416 PDCVTYNTLINGYC---KAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEA 472

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
            ++     K G   D   +  L  GY + G   +A  +   M++  + P+ V +  +I G
Sbjct: 473 YKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGG 532

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C   K ++A+S   ++ E G+ P+  TY T+L GY       +A +    M E   +P 
Sbjct: 533 LCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPD 592

Query: 415 KSTIQLVADSWRAIGLAREAKRVLKS 440
             T  ++       G+  +A ++  +
Sbjct: 593 VFTCNILLRGLCMEGMLEKALKLFNT 618



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 214/446 (47%), Gaps = 7/446 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  KG+  +A  +   +   G  P   TY  LV    +    K   ++I  + ++ +
Sbjct: 250 LDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNL 309

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +N +IN     G ++EA K+  +M++    P   +YNTLI G     K  E+ K
Sbjct: 310 LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFK 369

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ MS+ K VKPN  T+NI+V+ +C +  +++A N + KM  SG  PD VTYNTL   Y
Sbjct: 370 LLEEMSE-KGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGY 428

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A + + EM    ++ +  T   I+   C+E  +E+A + L   ++     + 
Sbjct: 429 CKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDE 488

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V + +LI G+   KD + VD+AL L   M+E  + P  VT++ I+      G   +    
Sbjct: 489 VSYGTLIVGYF--KDGN-VDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISK 545

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            ++++++G+ PD   ++ +  GY R G+ +KA      M +    P+V     ++ G C 
Sbjct: 546 LNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCM 605

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              +++A+ ++      G   +  TY TL+    +  +   A  LL  MEEK + P   T
Sbjct: 606 EGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYT 665

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEE 443
              +  +    G  REA+  +    E
Sbjct: 666 YNAIITALTDSGRIREAEEFMSKMLE 691



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 198/404 (49%), Gaps = 1/404 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +   + +    P + TY  L+  L  + R +    L  ++E   + PD + +N +I
Sbjct: 296 EAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLI 355

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N C E   + EA K+ ++M + G KP   T+N ++K Y   GK +++   +  M ++   
Sbjct: 356 NGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKM-EESGF 414

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  TYN L+  +C   ++ EA+  + +M    ++ D+VT NT+ R   +  +   A +
Sbjct: 415 SPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYK 474

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L   +      +E + G ++ GY K+GN++ A++    MKE E+ P+ V +N +I G  
Sbjct: 475 LLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLC 534

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
               ++     L  + E G+ PD  T++TI+  +   G + K  +  + MV+   +PD+ 
Sbjct: 535 QCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVF 594

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
             +IL +G    G  +KA  +  +    G   + V + T+I+  C   ++  A ++  +M
Sbjct: 595 TCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEM 654

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
            E  + P+  TY  ++    ++ +   AEE +  M EKG  P +
Sbjct: 655 EEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQ 698



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 201/424 (47%), Gaps = 4/424 (0%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSI---LSLISKVEKDGMK 61
           V  G+PH A  IF  +     RP L+T  TL+ +L R     S+       +   K G+ 
Sbjct: 146 VQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIV 205

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P+   FN +I          +A++    M    C P   TYNT++      G+  ++  L
Sbjct: 206 PNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDL 265

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           L  M + + + PN  TYNILV  +C    ++EA NV+  M  + + PD  TYN L     
Sbjct: 266 LMDM-KSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLC 324

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
             G    A ++  EM+N ++ P+  +   +++G  +   + +A + L  M E  V PN V
Sbjct: 325 NEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAV 384

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
             N ++K +      D     +T MEE G  PD VT++T+++ +  AG MG+     D+M
Sbjct: 385 THNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEM 444

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
            +  ++ D    + + +   R  + ++A  +L+S RK G   + V + T+I G+     +
Sbjct: 445 GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNV 504

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            RA+ ++++M E  I P+  TY  ++ G  +  +  +A   L  + E G+ P ++T   +
Sbjct: 505 DRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTI 564

Query: 422 ADSW 425
              +
Sbjct: 565 LHGY 568



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 109/451 (24%), Positives = 198/451 (43%), Gaps = 67/451 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  EA  + + +      P +++Y TL+       +      L+ ++ + G+
Sbjct: 320 INGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGV 379

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP+++  N M+    + G +D+A     KM++SG  P   TYNTLI GY   G   E+ +
Sbjct: 380 KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFR 439

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVV--------------YKMVASG- 165
            +  M + KN+K +  T N ++R  C +  +EEA+ ++              Y  +  G 
Sbjct: 440 TMDEMGR-KNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGY 498

Query: 166 --------------------IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                               I P  VTYN +     Q G+T +A   L E+  + + P+E
Sbjct: 499 FKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDE 558

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG-VDKALT 264
            T   I+ GYC+EG++E A +F  +M E    P++   N L++G       +G ++KAL 
Sbjct: 559 TTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLC----MEGMLEKALK 614

Query: 265 LMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           L   +   G   D VT++T++ +    G +     +  +M +  + PD + ++ +     
Sbjct: 615 LFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALT 674

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVM-----------------------FTTVISGWCNA 358
            +G  ++AE  ++ M + G  P  V+                       ++  I   C  
Sbjct: 675 DSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTE 734

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
            K + AM I+ +  + GI  +  TY  L+ G
Sbjct: 735 GKYKDAMRIFGESKQKGITVDKSTYINLMDG 765



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 146/280 (52%), Gaps = 5/280 (1%)

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG---YCKEGNMEDA 224
           P     +T   AY Q G+ + A Q+  +M+  ++RPN  TC  +++    Y    ++  +
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGF-LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD 283
                   +L + PN+  FN +I G+ L+ K  D V+  L +M ++   PD VT++TI+D
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVE-FLNVMGKYNCSPDNVTYNTILD 251

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
           A    G +G  +++  DM   G+ P+ + ++IL  GY + G  ++A +++  M +  + P
Sbjct: 252 ALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLP 311

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           +V  +  +I+G CN  +++ A  + ++M  + + P++ +Y TL+ G  E  +   A +LL
Sbjct: 312 DVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLL 371

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           + M EKGV+P   T  ++   +   G   +A   +   EE
Sbjct: 372 EEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEE 411



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 155/348 (44%), Gaps = 15/348 (4%)

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           L +L+L S      P+    +  + A+        A+ +  KM    ++P+ +T NTL  
Sbjct: 125 LSILRLTS------PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLN 178

Query: 179 AYAQYGETYRAEQMLFEMQNNQVR----PNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           +  +Y  ++       E  N+ ++    PN  T  I++ GYC E   +DA+ FL  M + 
Sbjct: 179 SLVRYPSSHSV-SFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKY 237

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
              P+ V +N+++               L  M+  G+ P+  T++ ++  +   G + + 
Sbjct: 238 NCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEA 297

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
             + + M +  + PD+  +++L  G    G  ++A  +   M    + P+VV + T+I+G
Sbjct: 298 ANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLING 357

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
                K+  A  + E+M E G+ PN  T+  ++  Y +  +   A   +  MEE G  P 
Sbjct: 358 CLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPD 417

Query: 415 KSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHR 462
             T   + + +   G   EA R +   E  R++M  K D + + +I R
Sbjct: 418 CVTYNTLINGYCKAGNMGEAFRTMD--EMGRKNM--KMDSVTLNTILR 461



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 118/254 (46%), Gaps = 26/254 (10%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P+ +TY  ++  L +  + +  +S ++++ + G+ PD   +N +++     G+V++A + 
Sbjct: 521 PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQF 580

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL-MSQDKNVKPNDRTYNILVRAW 145
             KM ++  KP   T N L++G    G  E++LKL    +S+ K +  +  TYN L+ + 
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAI--DTVTYNTLITSL 638

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM--------Q 197
           C +  +++A+N++ +M    + PD  TYN +  A    G    AE+ + +M        Q
Sbjct: 639 CKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQ 698

Query: 198 NNQVRPNERTCGII---------------VSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
             Q+  NE                     +   C EG  +DAMR     K+  +  +   
Sbjct: 699 VLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKST 758

Query: 243 FNSLIKGFLDIKDS 256
           + +L+ G +  + S
Sbjct: 759 YINLMDGLIKRRKS 772


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 205/410 (50%), Gaps = 1/410 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   GK  EAH +   + + G+ P +++Y  +V+   R      +L L+ +++  G+
Sbjct: 249 LHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGL 308

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD  ++N +I    ++G V EA ++ + M+  G  P    Y T+I G+  +G    + K
Sbjct: 309 KPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACK 368

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M + K + P+  TY  ++   C    + EA  +  +M+  G++PD VTY  L   Y
Sbjct: 369 LFDEMRR-KKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGY 427

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + GE   A  +  +M    + PN  T   +  G CK G ++ A   L+ M    + PN+
Sbjct: 428 CKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNV 487

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +N+++ G   I + +   K +  M+  G  PD +T++T+MDA+   G M K  E+   
Sbjct: 488 YTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRI 547

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+   ++P +  F++L  G+  +G  +  E ++  M + G+ PN   F +++  +C    
Sbjct: 548 MLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNN 607

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           M+    IY+ M + G+ P+  TY  L+ G+ +A+    A  L + M EKG
Sbjct: 608 MRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKG 657



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 201/401 (50%), Gaps = 1/401 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G +P    Y  ++  L +         L+  + K G+ PD++++  +I+   + GNV  
Sbjct: 306 KGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSA 365

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A K+F +M+     P   TY ++I G    GK  E+ ++   M   K ++P++ TY  L+
Sbjct: 366 ACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLV-KGLEPDEVTYTALI 424

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
             +C    ++EA++V  +MV  G+ P+ VTY  LA    + GE   A ++L EM    ++
Sbjct: 425 DGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQ 484

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           PN  T   IV+G CK GN+E  ++ +  M     +P+ + + +L+  +  + +     + 
Sbjct: 485 PNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHEL 544

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           L +M    ++P +VTF+ +M+ +  +G++   + + + M++ GI P+   F+ L K Y  
Sbjct: 545 LRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCI 604

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
               +    I  +M   GV P+   +  +I G C A  M+ A  ++++M E G +    T
Sbjct: 605 KNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAAT 664

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           Y+ L+ G+ + K+   A +L + M + G+  +K    +  D
Sbjct: 665 YDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVD 705



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 183/372 (49%), Gaps = 1/372 (0%)

Query: 50  SLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY 109
           +L+ ++   G  PD + +  +++     G +D+ +K+  ++K  G KP    YN +I   
Sbjct: 263 NLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLL 322

Query: 110 GNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
              G+  E+ +LL+ M +   V P++  Y  ++  +C   ++  A  +  +M    I PD
Sbjct: 323 CKNGEVVEAEQLLRGMRK-WGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPD 381

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
            VTY ++     + G+   A +M  EM    + P+E T   ++ GYCK G M++A     
Sbjct: 382 IVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHN 441

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
           +M +  + PN+V + +L  G     + D  ++ L  M   G++P+V T++TI++     G
Sbjct: 442 QMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIG 501

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
            + +  ++ ++M  AG  PD   ++ L   Y + GE  KA  +L  M    + P +V F 
Sbjct: 502 NIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFN 561

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
            +++G+C +  ++    + E M E GI PN  T+ +L+  Y          E+ + M ++
Sbjct: 562 VLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDR 621

Query: 410 GVRPKKSTIQLV 421
           GV P  +T  ++
Sbjct: 622 GVMPDSNTYNIL 633



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 197/399 (49%), Gaps = 5/399 (1%)

Query: 43  KRFKSILSLISKVEKD-GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTST 101
           K F     ++    KD G  P  ++F+       E+G V EA K+F K+   G   +  +
Sbjct: 151 KSFHLFTEMLIYTYKDWGSHP--LVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDS 208

Query: 102 YNTLIKGYG-NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
            N  +     N    + ++K+ +   +   V  N  + NI++   C    + EA N++ +
Sbjct: 209 CNLFLSRLSCNFEGIKIAVKVFEEFPE-LGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQ 267

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           M   G  PD V+Y  +   Y + GE  +  +++ E++   ++P+E     I+   CK G 
Sbjct: 268 MTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGE 327

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           + +A + L  M++  V P+ VV+ ++I GF  + +     K    M    + PD+VT+++
Sbjct: 328 VVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTS 387

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++     +G M + +E+F++M+  G+EPD   ++ L  GY +AGE ++A S+   M + G
Sbjct: 388 VIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKG 447

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
           + PNVV +T +  G C   ++  A  +  +M   G+ PN+ TY T++ G  +     +  
Sbjct: 448 LTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTV 507

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           +L++ M+  G  P   T   + D++  +G   +A  +L+
Sbjct: 508 KLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLR 546



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 140/277 (50%), Gaps = 1/277 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  + N ++++G  P ++TYT L   L +         L+ ++ + G++P+   +
Sbjct: 431 GEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTY 490

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++N   + GN+++ +K+ ++M  +G  P T TY TL+  Y  +G+  ++ +LL++M  
Sbjct: 491 NTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIM-L 549

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +K ++P   T+N+L+  +C    +E+   ++  M+  GI P+A T+N+L + Y       
Sbjct: 550 NKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMR 609

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
              ++   M +  V P+  T  I++ G+CK  NM++A      M E         +++LI
Sbjct: 610 ATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALI 669

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
           +GF   K      K    M + G+  +   +   +D 
Sbjct: 670 RGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDV 706



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 1/142 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN     G   +   +   ++E+G  P   T+ +L+     +   ++   +   +   G+
Sbjct: 564 MNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGV 623

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PDS  +N +I    ++ N+ EA  + ++M + G   T +TY+ LI+G+    K  E+ K
Sbjct: 624 MPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARK 683

Query: 121 LLQLMSQDKNVKPNDRTYNILV 142
           L + M +   V   D  Y+I V
Sbjct: 684 LFEEMRKHGLVAEKD-IYDIFV 704


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 232/439 (52%), Gaps = 16/439 (3%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G+   + T+  ++ AL ++ R    +S+I +  K G+ P+ + FN +I+   + G 
Sbjct: 154 MVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGA 213

Query: 80  VDEAMKIFQKMKD-SGC--KPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQDKNVKP 133
           +D A+K+ +KM+  SGC  KP + TYN+ + G+   GN+   EE  K +      K ++P
Sbjct: 214 MDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEML----GKEIEP 269

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           N RTY  LV  +    S+E A+ +  ++V  G+ P++V YN++    +  G+   A  +L
Sbjct: 270 NVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLL 329

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
            +M + ++ P++ T  I++ G C+ G + +A +FL  + E+ +  +    N +I      
Sbjct: 330 SDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRS 389

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
            +  G  + L  M   G+ PDVVTF T++D     G +    ++++ M+K G +P++ ++
Sbjct: 390 NNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIY 449

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           + +  G+ + G    A  ++ ++R+ G+  +VV + T+I G+CN  K+ +A +++ +M  
Sbjct: 450 NSVINGFAKEGSFDPAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALFSEMRN 508

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
            GI  +  TY TL+    +A    +A+EL+++M  +G+ P   T  ++  S+       E
Sbjct: 509 SGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEE 568

Query: 434 AKR-----VLKSAEEDRQS 447
                   VLK    DRQ+
Sbjct: 569 VIELHDYMVLKGVVPDRQT 587



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 187/384 (48%), Gaps = 4/384 (1%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
            +  LV   T+    +    +I+K++ DG       +N  ++   +  +V+   K++++M
Sbjct: 95  VFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEM 154

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
              G     +T+N +I   G  G+  E++ ++   S    + PN  T+N+++       +
Sbjct: 155 VSYGYIENVNTFNLIIYALGKEGRLVEAVSVIY-RSLKTGIWPNVVTFNMIIDGAIKMGA 213

Query: 151 IEEAWNVVYKM-VASG--IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
           ++ A  +V KM V SG  ++PD+VTYN+    + + G    AE+   EM   ++ PN RT
Sbjct: 214 MDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRT 273

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
              +V GY + G++E+A R    + E  + PN V++NS+I       D +G    L+ M 
Sbjct: 274 YATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMI 333

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
           +  + PD  T+S +++     G + +  +    +++  +  D    +++     R+    
Sbjct: 334 DKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLA 393

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            A+ +L +M   G+ P+VV F T+I   C   K++ A+ +YEKM + G  PNL  Y +++
Sbjct: 394 GAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVI 453

Query: 388 WGYGEAKQPWRAEELLQVMEEKGV 411
            G+ +      A  L+  +   G+
Sbjct: 454 NGFAKEGSFDPAILLIDTLRRMGL 477



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 94/418 (22%), Positives = 193/418 (46%), Gaps = 38/418 (9%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE---KDGMKPD 63
           +G+  EA  +    ++ G  P ++T+  ++    +       L L+ K+E      +KPD
Sbjct: 176 EGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPD 235

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           S+ +N+ +N   + GN+  A +  ++M     +P   TY TL+ GY  VG  E + +L  
Sbjct: 236 SVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCD 295

Query: 124 --------------------------------LMSQ--DKNVKPNDRTYNILVRAWCSKN 149
                                           L+S   DK + P+  TY+I++   C   
Sbjct: 296 ELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNG 355

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            + EA+  +  ++   +  DA ++N +     +      A+Q+L  M    + P+  T G
Sbjct: 356 YLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFG 415

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            ++  +CK+G +E+A++   +M +    PNL+++NS+I GF      D     +  +   
Sbjct: 416 TLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRM 475

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G+  DVVT++T++  + + G + +   +F +M  +GI      ++ L     +AG   +A
Sbjct: 476 GLF-DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQA 534

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           + ++  M   G+ P+ V +T +I+ +      +  + +++ M   G+ P+ +TY+T++
Sbjct: 535 KELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMV 592



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 129/288 (44%), Gaps = 3/288 (1%)

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           L+S     K +   ++ LVR      + E A+ V+ K+   G       +N       + 
Sbjct: 82  LISSYDICKSSPAVFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKL 141

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +  R  +M  EM +     N  T  +I+    KEG + +A+  +YR  +  + PN+V F
Sbjct: 142 NDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTF 201

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N +I G + +   D   K +  ME      VKPD VT+++ ++ +   G +   +E   +
Sbjct: 202 NMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKE 261

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+   IEP++  ++ L  GY R G  + A  +   + + G+ PN V++ ++I        
Sbjct: 262 MLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGD 321

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           M+ A  +   M +  I P+  TY  ++ G         A + LQ++ E
Sbjct: 322 MEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILE 369



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 109/224 (48%), Gaps = 2/224 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G  +EA      ++E        ++  ++  L R         L++ +   G+ PD
Sbjct: 351 LCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPD 410

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + F  +I+   + G V+ A+++++KM  +G KP    YN++I G+   G  + ++ L+ 
Sbjct: 411 VVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLID 470

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            + +      +  TYN L+  +C+   I++A+ +  +M  SGI    VTYNTL  +  + 
Sbjct: 471 TLRRMGLF--DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKA 528

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
           G   +A++++  M    + P+  T  I+++ + K+ + E+ +  
Sbjct: 529 GHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIEL 572


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 222/464 (47%), Gaps = 45/464 (9%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA-CS 75
           FN ++     P+ + +  L+ ++ + K   ++LSL  +++  G+ P+    + +IN+ C 
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108

Query: 76  -ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
              G + EA+ +F KM   G +P   TY TLI G   VG    +++LL  M Q KN +PN
Sbjct: 109 LNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ-KNCQPN 167

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
              YN ++ + C    + EA+N+  +MV  GI PD  TYN+L  A     E      +L 
Sbjct: 168 VFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLN 227

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM-KELEVHPNLVVFNSLIKGFLDI 253
           EM ++++ P+  +   +V   CKEG + +A   + +M +     PN++ +N+LI G+  I
Sbjct: 228 EMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKI 287

Query: 254 KDSDGVDKALTLMEEFG---VKPDVVTFSTIM----------DAWSSAGLMGKCQEI--- 297
           +    +DKA+ L  E     + PD VT+ST++          DA +    M  C +I   
Sbjct: 288 QR---IDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNL 344

Query: 298 ------FDDMVK----------------AGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
                  D + K                + ++PDI V +I   G  RAGE + A  + ++
Sbjct: 345 VTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSN 404

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           +   G+ P+V  ++ +I+G C    +  A  ++ +M E G   N   Y T+  G+    +
Sbjct: 405 LSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNE 464

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             RA +LLQ M  +G     ST+ L        GL +  K++L+
Sbjct: 465 TSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILR 508



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 181/379 (47%), Gaps = 2/379 (0%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           + +GK  EA ++F+ +I EG RP ++TY TL+  L +     + + L+  + +   +P+ 
Sbjct: 109 LNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNV 168

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
             +N +I++  +   V EA  +F +M   G  P   TYN+LI    N+ + +    LL  
Sbjct: 169 FAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNE 228

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVA-SGIQPDAVTYNTLARAYAQY 183
           M  D  + P+  ++N +V A C +  + EA +VV KM+   G  P+ ++YNTL   Y + 
Sbjct: 229 MV-DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKI 287

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
               +A  +  EM   ++ P+  T   ++ G C    ++DA+   + M      PNLV +
Sbjct: 288 QRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTY 347

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
             L+      +        L  +E   + PD+   +  +D    AG +   +++F ++  
Sbjct: 348 RILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSS 407

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G++PD+  +SI+  G  R G   +A  +   M + G   N  ++ T+  G+    +  R
Sbjct: 408 KGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSR 467

Query: 364 AMSIYEKMCEIGINPNLKT 382
           A+ + ++M   G + +  T
Sbjct: 468 AIQLLQEMVARGFSADAST 486



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 175/376 (46%), Gaps = 9/376 (2%)

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN--VKPNDRT 137
           +D A+  F +M      P+T  +N L+    ++ K +    LL L  Q  +  + PN  T
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLT---SIAKMKHHSTLLSLSHQMDSFGIPPNIYT 98

Query: 138 YNILVRAWCSKN--SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            +IL+ ++C  N   I EA ++  KM+  G +PD VTY TL     + G T  A ++L  
Sbjct: 99  LHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGS 158

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M     +PN      I+   CK+  + +A      M    + P++  +NSLI    ++ +
Sbjct: 159 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 218

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV-KAGIEPDIHVFS 314
              V   L  M +  + PDVV+F+T++DA    G + +  ++ D M+ + G  P++  ++
Sbjct: 219 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYN 278

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            L  GY +     KA  +   M +  + P+ V ++T+I G C+  ++Q A++++ +M   
Sbjct: 279 TLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVAC 338

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
              PNL TY  LL    + +    A  LL+ +E   + P      +  D     G   EA
Sbjct: 339 SQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAG-ELEA 397

Query: 435 KRVLKSAEEDRQSMPN 450
            R L S    +   P+
Sbjct: 398 ARDLFSNLSSKGLQPD 413



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 162/349 (46%), Gaps = 4/349 (1%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +F+ ++ +G  P + TY +L+ AL     +K + +L++++    + PD + FN ++
Sbjct: 186 EAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 245

Query: 72  NACSESGNVDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           +A  + G V EA  +  KM +  GC P   +YNTLI GY  + + ++++ L   M + + 
Sbjct: 246 DALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQEL 305

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           + P+  TY+ L+   C    +++A  + ++MVA    P+ VTY  L     +      A 
Sbjct: 306 I-PDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAM 364

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            +L  ++ + + P+ +   I + G C+ G +E A      +    + P++  ++ +I G 
Sbjct: 365 ALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGL 424

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
                 D   K    M+E G   +   ++TI   +       +  ++  +MV  G   D 
Sbjct: 425 CRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADA 484

Query: 311 HVFSILAKGYVRAGEPQKAESILTSM--RKYGVHPNVVMFTTVISGWCN 357
              ++  K     G  Q  + IL     +K  ++ NV++   +I   CN
Sbjct: 485 STMTLFVKMLSDDGLDQSLKQILRDFCKQKSWIYENVMVLQEIILVNCN 533



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/366 (22%), Positives = 153/366 (41%), Gaps = 44/366 (12%)

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
           N+I+ A +   +M+     P  V +N L  + A+         +  +M +  + PN  T 
Sbjct: 40  NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99

Query: 209 GII-------------------------------------VSGYCKEGNMEDAMRFLYRM 231
            I+                                     ++G CK GN   A+R L  M
Sbjct: 100 HILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSM 159

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSA 288
            +    PN+  +N++I      KD   V +A  L  E    G+ PD+ T+++++ A  + 
Sbjct: 160 VQKNCQPNVFAYNTIIDSL--CKDRQ-VTEAFNLFSEMVTKGISPDIFTYNSLIHALCNL 216

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM-RKYGVHPNVVM 347
                   + ++MV + I PD+  F+ +     + G+  +A  ++  M ++ G  PNV+ 
Sbjct: 217 CEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVIS 276

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           + T+I+G+C   ++ +AM ++ +MC   + P+  TY TL+ G    ++   A  L   M 
Sbjct: 277 YNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 336

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLS 467
                P   T +++ D         EA  +LK+ E        + + IA++ + R   L 
Sbjct: 337 ACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELE 396

Query: 468 ASNSTF 473
           A+   F
Sbjct: 397 AARDLF 402


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 209/419 (49%), Gaps = 4/419 (0%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
           + TY++++ +L ++ + +    ++ ++   G  PD   FN ++   + S N+++A +++Q
Sbjct: 10  VFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQ 69

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
            M +SG KP   +Y+ LI G   +GK +ESLK+L  M   +   P+ + Y+ LVRA    
Sbjct: 70  HMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVM-RGQTPSMQAYSSLVRALAKA 128

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
             ++ A ++  +M+  G  PD + +  L     Q G+   A +   +M  +  +PN    
Sbjct: 129 RRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVY 188

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
            +++ G C  G +E A      MK     P++V +N+L+      +  +   K    M  
Sbjct: 189 NVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRA 248

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G  P+V+TFST++      G + K  E+F  M++AG +P+ + ++ L  G  RA +  +
Sbjct: 249 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQ 308

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC-EIGINPNLKTYETLL 387
           A  +   M +  + P+ V + ++I+G+C    M  A  +Y +M    G+ P + T+ TL+
Sbjct: 309 ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI 368

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ-LVADSWRAIGLAREAKRVLKSAEEDR 445
            G+ +  +  RA EL+  M  KG+     T + L+A   RA  L  EA  V K   E +
Sbjct: 369 DGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKL-DEALEVYKQMREKK 426



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 188/380 (49%), Gaps = 2/380 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  E+  I + ++  G  P++  Y++LV AL + +R     SL  ++ + G  PD ++F
Sbjct: 94  GKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMF 153

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I    ++G V +A + F++M   GC+P    YN L+ G  + G+ E++  L   M +
Sbjct: 154 YELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEM-K 212

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
             +  P+  TYN L+ A C    +EE   +   M A+G  P+ +T++TL     + GE  
Sbjct: 213 SHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELE 272

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A ++   M     +PN+ T   ++SG C+   +  A     +M +  + P+ V +NSLI
Sbjct: 273 KALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLI 332

Query: 248 KGFLDIKDSDGVDKALTLME-EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
            G+      D  +K    M    G++P +VTF+T++D +   G +G+  E+  +M   G+
Sbjct: 333 AGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGL 392

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
             D   + IL  G  RA +  +A  +   MR+     + V   + + G C    + +A +
Sbjct: 393 AADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYA 452

Query: 367 IYEKMCEIGINPNLKTYETL 386
           ++E   + G  PN +T+  L
Sbjct: 453 VFEATRKSGAVPNPETFRIL 472



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 97/407 (23%), Positives = 190/407 (46%), Gaps = 2/407 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV + KP E++ +   ++  G  P +  +  ++    R    +    +   + + G KPD
Sbjct: 20  LVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPD 79

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ ++ +I+  ++ G +DE++KI  +M   G  P+   Y++L++      + + +  L  
Sbjct: 80  NVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFD 139

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +  +  P+   +  L+   C    +++A     +M   G QP+   YN L       
Sbjct: 140 EMIRGGH-HPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSS 198

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+  +A  +  EM+++   P+  T   ++   CK   +E+  +    M+     PN++ F
Sbjct: 199 GQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITF 258

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           ++LI G     + +   +    M E G KP+  T++T++     A  + + +E+F+ M +
Sbjct: 259 STLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQ 318

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR-KYGVHPNVVMFTTVISGWCNAVKMQ 362
           A I PD   ++ L  GY + G   +AE +   M    G+ P +V F T+I G+C   K+ 
Sbjct: 319 ACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLG 378

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
           RA  +  +M   G+  +  TY  L+ G   A +   A E+ + M EK
Sbjct: 379 RANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREK 425



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 154/324 (47%), Gaps = 1/324 (0%)

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M+D        TY+++IK      KPEES K+L+ M       P+   +N +++ +   N
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEM-MAAGCNPDVFAFNGVMQGFARSN 59

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
           ++E+A  V   MV SG +PD V+Y+ L    A+ G+   + ++L EM      P+ +   
Sbjct: 60  NMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYS 119

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            +V    K   ++ A      M     HP+ ++F  LI G           +    M + 
Sbjct: 120 SLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKH 179

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G +P+V  ++ ++    S+G + +   +F +M      PD+  ++ L     +A   ++ 
Sbjct: 180 GCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEG 239

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             +  +MR  G  PNV+ F+T+I G C   ++++A+ ++  M E G  PN  TY TL+ G
Sbjct: 240 CKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISG 299

Query: 390 YGEAKQPWRAEELLQVMEEKGVRP 413
              A++  +A EL + M +  + P
Sbjct: 300 LCRAEKVIQARELFEKMTQACIPP 323



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 163/319 (51%), Gaps = 12/319 (3%)

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +DKN+  N  TY+ ++++   +   EE++ V+ +M+A+G  PD   +N + + +A+    
Sbjct: 2   RDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNM 61

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A ++   M  +  +P+  +  I++ G  K G ++++++ L  M      P++  ++SL
Sbjct: 62  EKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSL 121

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           ++     +    VD A +L +E    G  PD + F  ++     AG +    E F  M K
Sbjct: 122 VRALAKARR---VDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPK 178

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G +P++ V+++L  G   +G+ ++A ++   M+ +   P+VV + T++   C A +++ 
Sbjct: 179 HGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEE 238

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
              ++E M   G  PN+ T+ TL+ G     +  +A E+   M E G +P K T   +  
Sbjct: 239 GCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIS 298

Query: 424 SWRAIGLAREAKRVLKSAE 442
                GL R A++V+++ E
Sbjct: 299 -----GLCR-AEKVIQARE 311



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 157/334 (47%), Gaps = 8/334 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK  +A   F  + + G +P +  Y  L+  L    + +   +L ++++     PD
Sbjct: 160 LCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPD 219

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +++A  ++  V+E  K+F+ M+ +G  P   T++TLI G    G+ E++L++  
Sbjct: 220 VVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFG 279

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  +   KPN  TY  L+   C    + +A  +  KM  + I PDAV YN+L   Y + 
Sbjct: 280 SM-LEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKR 338

Query: 184 GETYRAEQMLFEMQNNQ-VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
           G    AE++  EM     ++P   T   ++ G+CK G +  A   +  M    +  +   
Sbjct: 339 GSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCT 398

Query: 243 FNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +  LI G   +  +  +D+AL +   M E     D V+  + +      G + +   +F+
Sbjct: 399 YRILIAG---LSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFE 455

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
              K+G  P+   F IL++  ++ G  + A+ ++
Sbjct: 456 ATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 489



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 147/297 (49%), Gaps = 2/297 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  +A+ +F  +      P ++TY TL+ A+ + +R +    L   +   G  P+
Sbjct: 195 LCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPN 254

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I F+ +I+    +G +++A+++F  M ++GCKP   TY TLI G     K  ++ +L +
Sbjct: 255 VITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFE 314

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV-ASGIQPDAVTYNTLARAYAQ 182
            M+Q   + P+   YN L+  +C + S++EA  +  +M   +G+QP  VT+NTL   + +
Sbjct: 315 KMTQ-ACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCK 373

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+  RA +++ EM    +  +  T  I+++G  +   +++A+    +M+E +   + V 
Sbjct: 374 LGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVS 433

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
             S + G     + D          + G  P+  TF  + ++    G +   Q++ +
Sbjct: 434 CVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 490



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 23/103 (22%), Positives = 48/103 (46%)

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           MR   +  NV  ++++I       K + +  + E+M   G NP++  +  ++ G+  +  
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             +A E+ Q M E G +P   +  ++      IG   E+ ++L
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKIL 103


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 211/430 (49%), Gaps = 7/430 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   E   IF  + +    P +ITY  L+    + +R       + +++ +G+KP+ + +
Sbjct: 304 GLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTY 363

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +  I+A  + G + EA+K F  M+     P   TY +LI      G   E+LKL++ + Q
Sbjct: 364 STFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQ 423

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              +K N  TY  L+   C +  ++EA  V   M+ +G+ P+  TY  L   + +  E  
Sbjct: 424 -AGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEME 482

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A+ +L EM+   ++P+    G I+ G C E  +E+A   +  +KE  ++ N V++ +L+
Sbjct: 483 YAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLM 542

Query: 248 KGFLDIKDSDGVDKALTLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
             +     S    +ALTL+EE    G+    VT+  ++D    +GL+ +    F  M + 
Sbjct: 543 DAYFK---SGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEI 599

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G++P++ V++ L  G  +    + A+ +   M   G+ P+ + +T +I G      +Q A
Sbjct: 600 GLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEA 659

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           +++ ++M EIG+  +L  Y  L+WG   + Q  +A  LL  M  KGV P +     +   
Sbjct: 660 LNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKK 719

Query: 425 WRAIGLAREA 434
           + A+G   EA
Sbjct: 720 YYALGKVDEA 729



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 206/411 (50%), Gaps = 1/411 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G + ++ TY  ++  L ++   +   SL +++++ G  PD + +N++I+   + G +DE 
Sbjct: 250 GIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDEC 309

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + IF++MKD+ C P   TYN LI  +    +  ++ + L  M  +  +KPN  TY+  + 
Sbjct: 310 ICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKAN-GLKPNVVTYSTFID 368

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           A+C +  ++EA      M    + P+  TY +L  A  + G    A +++ E+    ++ 
Sbjct: 369 AFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKL 428

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  T   ++ G C+EG M++A      M    V PN   + +L+ GF+  K+ +     L
Sbjct: 429 NVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDIL 488

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M+E  +KPD++ + TI+    +   + + + +  ++ ++GI  +  +++ L   Y ++
Sbjct: 489 KEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKS 548

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+  +A ++L  M   G+    V +  +I G C +  +Q AM  + +M EIG+ PN+  Y
Sbjct: 549 GQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVY 608

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
             L+ G  +      A++L   M +KG+ P K     + D     G  +EA
Sbjct: 609 TALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEA 659



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 206/411 (50%), Gaps = 7/411 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P    +  L +AL      +       K+ K  + P     NA+++  S+ G  D + K 
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF 242

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F+ M  +G K +  TYN +I      G  E +  L   M ++    P+  TYN L+    
Sbjct: 243 FKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQM-KEAGFTPDIVTYNSLIDGHG 301

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               ++E   +  +M  +   PD +TYN L   + ++    +A + L EM+ N ++PN  
Sbjct: 302 KLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVV 361

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T    +  +CKEG +++A++F   M+ + + PN   + SLI    + K +  + +AL L+
Sbjct: 362 TYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDA--NCK-AGNLAEALKLV 418

Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           EE    G+K +VVT++ ++D     G M + +E+F  M+ AG+ P+   ++ L  G+++A
Sbjct: 419 EEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKA 478

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
            E + A+ IL  M++  + P+++++ T++ G CN  +++ A  +  ++ E GIN N   Y
Sbjct: 479 KEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIY 538

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
            TL+  Y ++ Q   A  LL+ M + G+   + T   + D     GL +EA
Sbjct: 539 TTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEA 589



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 186/357 (52%), Gaps = 1/357 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   TYT+L+ A  +       L L+ ++ + G+K + + + A+++   E G + EA ++
Sbjct: 393 PNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEV 452

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F+ M ++G  P   TY  L+ G+    + E +  +L+ M ++K +KP+   Y  ++   C
Sbjct: 453 FRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEM-KEKCIKPDLLLYGTILWGLC 511

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           +++ +EEA  ++ ++  SGI  +AV Y TL  AY + G+   A  +L EM +  +   E 
Sbjct: 512 NESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEV 571

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   ++ G CK G +++AM    RM E+ + PN+ V+ +L+ G       +   K    M
Sbjct: 572 TYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEM 631

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            + G+ PD + ++ ++D     G + +   + D M++ G+E D+H ++ L  G   +G+ 
Sbjct: 632 LDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQV 691

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           QKA ++L  M   GV P+ V++  +I  +    K+  A+ +  +M + G+   L  +
Sbjct: 692 QKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDH 748



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 187/378 (49%), Gaps = 1/378 (0%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P   +F+A+ +A  E G ++EA + F KM+     P   + N L+     VG+ + S K 
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF 242

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
            + M     +K +  TYNI++   C +  +E A ++  +M  +G  PD VTYN+L   + 
Sbjct: 243 FKDMGA-AGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHG 301

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           + G       +  +M++    P+  T   +++ +CK   M  A  FL+ MK   + PN+V
Sbjct: 302 KLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVV 361

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            +++ I  F          K    M    + P+  T+++++DA   AG + +  ++ +++
Sbjct: 362 TYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEI 421

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           ++AGI+ ++  ++ L  G    G  ++AE +  +M   GV PN   +T ++ G+  A +M
Sbjct: 422 LQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEM 481

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           + A  I ++M E  I P+L  Y T+LWG     +   A+ L+  ++E G+         +
Sbjct: 482 EYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTL 541

Query: 422 ADSWRAIGLAREAKRVLK 439
            D++   G A EA  +L+
Sbjct: 542 MDAYFKSGQATEALTLLE 559



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 154/350 (44%), Gaps = 1/350 (0%)

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV-KPNDRTYNILVRAWCSKNSIEE 153
           C    S  N ++K    + +   S  +  L+   +NV  P    ++ L  A      +EE
Sbjct: 144 CARFYSDANAVLKELICLRRVLPSWDVFDLLWATRNVCVPGFGVFDALFSALIELGMLEE 203

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A     KM    + P   + N L    ++ G    + +   +M    ++ +  T  I++ 
Sbjct: 204 ASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMID 263

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
             CKEG++E A     +MKE    P++V +NSLI G   +   D        M++    P
Sbjct: 264 YLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDP 323

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           DV+T++ +++ +     M K  E   +M   G++P++  +S     + + G  Q+A    
Sbjct: 324 DVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFF 383

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             MR+  + PN   +T++I   C A  +  A+ + E++ + GI  N+ TY  LL G  E 
Sbjct: 384 VDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEE 443

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            +   AEE+ + M   GV P + T   +   +        AK +LK  +E
Sbjct: 444 GRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKE 493



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 151/307 (49%), Gaps = 9/307 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  EA  +F  ++  G  P   TYT LV    + K  +    ++ ++++  +KPD
Sbjct: 440 LCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 499

Query: 64  SILFNAMI-NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
            +L+  ++   C+ES  ++EA  +  ++K+SG       Y TL+  Y   G+  E+L LL
Sbjct: 500 LLLYGTILWGLCNES-RLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLL 558

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           + M  D  +   + TY  L+   C    ++EA +   +M   G+QP+   Y  L     +
Sbjct: 559 EEM-LDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCK 617

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                 A+++  EM +  + P++     ++ G  K GN+++A+    RM E+ +  +L  
Sbjct: 618 NNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHA 677

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           + +LI G   +  S  V KA  L++E    GV PD V +  ++  + + G + +  E+ +
Sbjct: 678 YTALIWG---LSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQN 734

Query: 300 DMVKAGI 306
           +M K G+
Sbjct: 735 EMAKRGM 741



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 5/202 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+     G+  EA  +   +++ G   T +TY  L+  L +    +  +    ++ + G+
Sbjct: 542 MDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGL 601

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+  ++ A+++   ++   + A K+F +M D G  P    Y  LI G    G  +E+L 
Sbjct: 602 QPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALN 661

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M +   ++ +   Y  L+        +++A N++ +M+  G+ PD V Y  L + Y
Sbjct: 662 LRDRMIE-IGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKY 720

Query: 181 AQYGETYRAEQMLFEMQNNQVR 202
              G+   A     E+QN   +
Sbjct: 721 YALGKVDEA----LELQNEMAK 738


>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
 gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
          Length = 786

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/508 (25%), Positives = 226/508 (44%), Gaps = 75/508 (14%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA   F  L   GH P ++TY  L+    +   +   L ++ ++E+DG +PD++ +
Sbjct: 258 GLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTY 317

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +    + +G  +EA K    M   G  P   TYNT++  YGN+GK +E+L L   M +
Sbjct: 318 NELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKK 377

Query: 128 DKNVKPNDRTYNILV--------------------RAWCSKNSIEEAWN----------- 156
              V PN  TYN ++                    R+ C+ N +   WN           
Sbjct: 378 SGCV-PNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRV--TWNTMLAVCGKRGM 434

Query: 157 ------VVYKMVASGIQPDAVTYNTLARAYAQYGE---------------------TYR- 188
                 V+  M + G++    TYNTL  AY + G                      TY  
Sbjct: 435 EDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNA 494

Query: 189 -------------AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
                        A+ ++ +M+    +PN+++  +++  Y K GN+         +    
Sbjct: 495 LLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGT 554

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           V P+ V+  +L+      +   G++KA   ++  G  PD+V F++++  ++  G+  K  
Sbjct: 555 VFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVT 614

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           EIFD + ++G+ PD+  ++ L   Y +  E  +AE IL  ++   V P+VV + TVI+G+
Sbjct: 615 EIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGF 674

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C    ++ A  I  +M   G+ P + TY TL+ GY   +    A E++  M +  ++P +
Sbjct: 675 CKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPME 734

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEE 443
            T + V DS+       EA+  L    E
Sbjct: 735 LTYRRVVDSYCKAKRFEEARSFLSEVSE 762



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 213/478 (44%), Gaps = 45/478 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDG 59
           ++ L   G+   A  +F  L  +G  PTL+TY  ++    R  R +  I++L+ ++   G
Sbjct: 180 LHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAG 239

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           ++PD    + +I AC   G VDEA+  F+ +K  G  P   TYN L++ +G  G   E+L
Sbjct: 240 VEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEAL 299

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           ++L+ M QD   +P+  TYN L   +      EEA   +  M + G+ P+A TYNT+  A
Sbjct: 300 RVLKEMEQD-GCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTA 358

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           Y   G+   A  +  +M+ +   PN  T   I+    K+      +  L  M      PN
Sbjct: 359 YGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPN 418

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            V +N+++         D V + L  M+  GV+    T++T++ A+   G      ++++
Sbjct: 419 RVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYN 478

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN--------------- 344
           +M  AG  P +  ++ L     R G+   A+SI++ MR  G  PN               
Sbjct: 479 EMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGG 538

Query: 345 ---------------------VVMFTTVISGWCNAVKMQRAMSIYEKMCEI---GINPNL 380
                                V++ T VI+ +    K +R   I +   E+   G NP+L
Sbjct: 539 NIAGIDAIEKEVYGGTVFPSWVILRTLVIANF----KCRRLGGIEKAFQEVKARGYNPDL 594

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             + ++L  Y +     +  E+   +++ G+ P   T   + D +     + EA+++L
Sbjct: 595 VIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKIL 652



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/451 (23%), Positives = 199/451 (44%), Gaps = 38/451 (8%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P   T +T++AA  R       ++    ++  G  P  + +NA++    ++GN  EA
Sbjct: 239 GVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEA 298

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +++ ++M+  GC+P   TYN L   Y   G  EE+ K L  M+  K + PN  TYN ++ 
Sbjct: 299 LRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTS-KGLLPNAFTYNTVMT 357

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           A+ +   ++EA  +  +M  SG  P+  TYN +     +        +ML EM  +   P
Sbjct: 358 AYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTP 417

Query: 204 NERTCGIIVSGYCKEGNMED-AMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           N  T   +++  C +  MED   R L  MK   V  +   +N+LI  +          K 
Sbjct: 418 NRVTWNTMLA-VCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKM 476

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              M   G  P + T++ +++  S  G     Q I   M   G +P+   +S+L + Y +
Sbjct: 477 YNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAK 536

Query: 323 AGEPQKAESI-----------------------------------LTSMRKYGVHPNVVM 347
            G     ++I                                      ++  G +P++V+
Sbjct: 537 GGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVI 596

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           F +++S +       +   I++ + + G++P+L TY +L+  Y +  + W AE++L  ++
Sbjct: 597 FNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLK 656

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
              V+P   +   V + +   GL +EA+R+L
Sbjct: 657 SSQVKPDVVSYNTVINGFCKQGLIKEAQRIL 687



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/419 (24%), Positives = 203/419 (48%), Gaps = 9/419 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA  +F+ + + G  P + TY  ++  L ++ RF  +L ++ ++ + G  P+ + +
Sbjct: 363 GKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTW 422

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N M+  C + G  D   ++ + MK  G + +  TYNTLI  YG  G    + K+   M+ 
Sbjct: 423 NTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTS 482

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                P   TYN L+     +     A ++V KM   G +P+  +Y+ L + YA+ G   
Sbjct: 483 -AGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIA 541

Query: 188 RAEQMLFEMQNNQVRPN---ERTCGIIVSGYCKE-GNMEDAMRFLYRMKELEVHPNLVVF 243
             + +  E+    V P+    RT  +I +  C+  G +E A +    +K    +P+LV+F
Sbjct: 542 GIDAIEKEVYGGTVFPSWVILRTL-VIANFKCRRLGGIEKAFQ---EVKARGYNPDLVIF 597

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           NS++  +        V +    +++ G+ PD++T++++MD ++      + ++I + +  
Sbjct: 598 NSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKS 657

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           + ++PD+  ++ +  G+ + G  ++A+ IL+ M   G+ P VV + T++ G+ +      
Sbjct: 658 SQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSE 717

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
           A  +   M +  + P   TY  ++  Y +AK+   A   L  + E      K  +  +A
Sbjct: 718 AREVINYMIQHNLKPMELTYRRVVDSYCKAKRFEEARSFLSEVSETDPNFDKKVLHTLA 776



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 180/391 (46%), Gaps = 7/391 (1%)

Query: 35  LVAALTRQKRFKSILSLISKVE-KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS 93
           +V AL R+ +  ++ +L+ ++    G + D   +  +++A S +G  + A+++F +++  
Sbjct: 143 VVRALGREGQHDAVCALLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQ 202

Query: 94  GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
           G  PT  TYN ++  YG +G+    +  L    +   V+P+D T + ++ A C    ++E
Sbjct: 203 GVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDE 262

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A      + A G  P  VTYN L + + + G    A ++L EM+ +  +P+  T   +  
Sbjct: 263 AVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAG 322

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---MEEFG 270
            Y + G  E+A + L  M    + PN   +N+++  + +I     VD+AL L   M++ G
Sbjct: 323 TYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGK---VDEALALFDQMKKSG 379

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
             P+V T++ I+             E+  +M ++G  P+   ++ +     + G      
Sbjct: 380 CVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVT 439

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +L  M+  GV  +   + T+I+ +        A  +Y +M   G  P L TY  LL   
Sbjct: 440 RVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVL 499

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
                   A+ ++  M  KG +P   +  L+
Sbjct: 500 SRQGDWSTAQSIVSKMRTKGFKPNDQSYSLL 530



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/374 (21%), Positives = 165/374 (44%), Gaps = 4/374 (1%)

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           +D + P  I   +++ A   SG+ + A+ + +     G     S    +++  G  G+ +
Sbjct: 98  RDELLPADI--PSLLKALELSGHWEWALALLRWAGAEGAA-DASALEMVVRALGREGQHD 154

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
               LL  M      + + R Y  ++ A       E A  +  ++   G+ P  VTYN +
Sbjct: 155 AVCALLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVV 214

Query: 177 ARAYAQYGETY-RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
              Y + G ++ R   +L EM+   V P++ T   +++  C++G +++A+ F   +K   
Sbjct: 215 LDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARG 274

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
             P +V +N+L++ F    +     + L  ME+ G +PD VT++ +   ++ AG   +  
Sbjct: 275 HTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAA 334

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           +  D M   G+ P+   ++ +   Y   G+  +A ++   M+K G  PNV  +  ++   
Sbjct: 335 KCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGML 394

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
               +    + +  +M   G  PN  T+ T+L   G+         +L+ M+  GV   +
Sbjct: 395 GKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSR 454

Query: 416 STIQLVADSWRAIG 429
            T   +  ++   G
Sbjct: 455 DTYNTLIAAYGRCG 468



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 5/186 (2%)

Query: 260 DKALTLMEEFGVKP----DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
           D    L++E  + P    DV  ++T++ A S AG   +  E+F ++ + G+ P +  +++
Sbjct: 154 DAVCALLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNV 213

Query: 316 LAKGYVRAGEP-QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
           +   Y R G    +  ++L  MR  GV P+    +TVI+  C    +  A++ +E +   
Sbjct: 214 VLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKAR 273

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G  P + TY  LL  +G+A     A  +L+ ME+ G +P   T   +A ++   G   EA
Sbjct: 274 GHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEA 333

Query: 435 KRVLKS 440
            + L +
Sbjct: 334 AKCLDT 339


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 204/420 (48%), Gaps = 3/420 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD--GMK 61
           L+  G+  +    F  L+  G RP    +   V A          L+++ ++ +      
Sbjct: 133 LLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPP 192

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           PD+  +N +I     SG   +A+K+F +M D G  P   TYNT+I G+   G  E   +L
Sbjct: 193 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRL 252

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
              M QD   KPN  TYN+L+   C    ++E   ++ +M +  + PD  TY+ L     
Sbjct: 253 RDQMLQDGR-KPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLT 311

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           + G++     +  E     V     TC I+++G CK+G +  A + L  +    + P   
Sbjct: 312 RTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTA 371

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
           ++N+LI G+  ++D  G       M+   ++PD +T++ +++      ++ + +++  +M
Sbjct: 372 IYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEM 431

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
            K+G++P +  F+ L   Y RAG+ +K  ++L+ M+  G+  NV+ F +V+  +C   K+
Sbjct: 432 EKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKI 491

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             A++I + M    + PN + Y +++  Y E+    +A  L++ M+  GV     T  L+
Sbjct: 492 PEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLL 551



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 209/446 (46%), Gaps = 72/446 (16%)

Query: 7   KGKPHEAHY-IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD-- 63
           KG   EA + + + ++++G +P ++TY  L++ L R  R     +L+ ++    M PD  
Sbjct: 242 KGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGF 301

Query: 64  --SILFNAM-------------------------------INACSESGNVDEAMKIFQKM 90
             SILF+ +                               +N   + G V +A ++ + +
Sbjct: 302 TYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEML 361

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
             +G  PTT+ YNTLI GY  V   + +  + + M + ++++P+  TYN L+   C    
Sbjct: 362 VHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQM-KSRHIRPDHITYNALINGLCKMEM 420

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           I EA ++V +M  SG+ P   T+NTL  AY + G+  +   +L +MQ+  ++ N  + G 
Sbjct: 421 ITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGS 480

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           +V  +CK G + +A+  L  M   +V PN  V+NS+I  ++   +S G ++A  L+E+  
Sbjct: 481 VVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYI---ESGGTEQAFLLVEK-- 535

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
                                         M  +G+   I  +++L KG  +  +  +AE
Sbjct: 536 ------------------------------MKSSGVSASIFTYNLLLKGLCKNSQIDEAE 565

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            ++ ++   G+ P+VV + T+IS  CN     RA+ + ++M +  I P L+TY  LL   
Sbjct: 566 ELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSAL 625

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKS 416
           G A +    E L Q M  K V P  S
Sbjct: 626 GSAGRVHDMECLYQHMVHKNVEPSSS 651



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 195/410 (47%), Gaps = 1/410 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  +F+ +++ G  P  ITY T++    +    ++   L  ++ +DG KP+ + +
Sbjct: 209 GKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTY 268

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +++    +G +DE   +  +M      P   TY+ L  G    G     L L    S 
Sbjct: 269 NVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFG-ESL 327

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K V     T +IL+   C    + +A  V+  +V +G+ P    YNTL   Y Q  +  
Sbjct: 328 KKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQ 387

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +  +M++  +RP+  T   +++G CK   + +A   +  M++  V P++  FN+LI
Sbjct: 388 GAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLI 447

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             +      +     L+ M++ G+K +V++F +++ A+   G + +   I DDM+   + 
Sbjct: 448 DAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVV 507

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P+  V++ +   Y+ +G  ++A  ++  M+  GV  ++  +  ++ G C   ++  A  +
Sbjct: 508 PNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEEL 567

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              +   G+ P++ +Y T++          RA ELLQ M +  +RP   T
Sbjct: 568 IYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRT 617



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 164/313 (52%), Gaps = 1/313 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  +A  +   L+  G  PT   Y TL+    + +  +   S+  +++   +
Sbjct: 342 LNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHI 401

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD I +NA+IN   +   + EA  +  +M+ SG  P+  T+NTLI  YG  G+ E+   
Sbjct: 402 RPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFT 461

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M QDK +K N  ++  +V+A+C    I EA  ++  M+   + P+A  YN++  AY
Sbjct: 462 VLSDM-QDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAY 520

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G T +A  ++ +M+++ V  +  T  +++ G CK   +++A   +Y +    + P++
Sbjct: 521 IESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDV 580

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N++I    +  D+D   + L  M ++ ++P + T+  ++ A  SAG +   + ++  
Sbjct: 581 VSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQH 640

Query: 301 MVKAGIEPDIHVF 313
           MV   +EP   ++
Sbjct: 641 MVHKNVEPSSSIY 653



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 164/349 (46%), Gaps = 3/349 (0%)

Query: 97  PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWN 156
           P+ S+ N L++   +VG+  +      L+      +P+   +N  V+A  +   ++EA  
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVA-AGARPDTFAWNKAVQACVAAGDLDEALA 179

Query: 157 VVYKMVAS--GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
           ++ +M  S     PDA +YN +     + G+   A ++  EM +  V PN+ T   ++ G
Sbjct: 180 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDG 239

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           + K G++E   R   +M +    PN+V +N L+ G       D     +  M  + + PD
Sbjct: 240 HVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPD 299

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
             T+S + D  +  G       +F + +K G+    +  SIL  G  + G+  KAE +L 
Sbjct: 300 GFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLE 359

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            +   G+ P   ++ T+I+G+C    +Q A SI+E+M    I P+  TY  L+ G  + +
Sbjct: 360 MLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKME 419

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
               AE+L+  ME+ GV P   T   + D++   G   +   VL   ++
Sbjct: 420 MITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQD 468



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/378 (22%), Positives = 178/378 (47%), Gaps = 13/378 (3%)

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++ +    G   +    F  +  +G +P T  +N  ++     G  +E+L +L+ M +
Sbjct: 127 NLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGR 186

Query: 128 DKNVKPNDR-TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +   P D  +YN+++          +A  V  +MV  G+ P+ +TYNT+   + + G+ 
Sbjct: 187 SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDL 246

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
               ++  +M  +  +PN  T  +++SG C+ G M++    +  M    + P+   ++ L
Sbjct: 247 EAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSIL 306

Query: 247 IKGFLDIKDSDGVDKALTLMEEFG--VKPDVV----TFSTIMDAWSSAGLMGKCQEIFDD 300
             G     DS       T++  FG  +K  V+    T S +++     G + K +++ + 
Sbjct: 307 FDGLTRTGDSR------TMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEM 360

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +V  G+ P   +++ L  GY +  + Q A SI   M+   + P+ + +  +I+G C    
Sbjct: 361 LVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEM 420

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  +  +M + G++P+++T+ TL+  YG A Q  +   +L  M++KG++    +   
Sbjct: 421 ITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGS 480

Query: 421 VADSWRAIGLAREAKRVL 438
           V  ++   G   EA  +L
Sbjct: 481 VVKAFCKNGKIPEAVAIL 498


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 199/419 (47%), Gaps = 4/419 (0%)

Query: 2   NILVGKGKPHE---AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           ++++G  + H+   A  +FN + +EG  P  +TY+TL+  L    R      LI ++   
Sbjct: 425 SMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILH 484

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+ P +      I A  + G  ++A ++F  MK+ GC+P   TY  LI G    G  + +
Sbjct: 485 GILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVA 544

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           + L   MS+D  V PN  TYN L+        I+ A+ V+  M  +G+  + VTYN + +
Sbjct: 545 IGLFHRMSRD-GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIK 603

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            Y   G+  +A  ++  M       N  T   I+ GYC  GN   A+R L  M++    P
Sbjct: 604 GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 663

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           +   +  LI GF  I   +        M + G+ P+ VT++ ++D +     +     + 
Sbjct: 664 DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 723

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           + M ++G  P++  +++L  G  +      AE +   M + G+ PNVV +T +I G C  
Sbjct: 724 EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 783

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
                A+ ++ KM E G  PNL TY +L+   G+  +   AE L   +E  G+ P + T
Sbjct: 784 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEIT 842



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 206/406 (50%), Gaps = 1/406 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
             + L + G R  L  Y+ L+  L+R     +++    ++  +G++P+ +++NA+INA  
Sbjct: 337 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 396

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + GNV +A  I +K+ +S   P T TY ++I G+      + +L++   M+++   +PN 
Sbjct: 397 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE-GCEPNT 455

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY+ L+   C    + EA++++ +M+  GI P A T      A    G    A ++  +
Sbjct: 456 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 515

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M+N    PN  T   ++SG C  G ++ A+   +RM    V PN V +N+LI   ++ + 
Sbjct: 516 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 575

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
                  L LM   G+  ++VT++ ++  +   G   K   + ++M++ G   ++  ++ 
Sbjct: 576 IKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 635

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           + KGY  +G    A  IL  MR  G  P+   +T +I G+C   KM+ A  ++ +M + G
Sbjct: 636 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 695

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           + PN  TY  L+ GY + ++   A  LL+ M+  G RP   T  ++
Sbjct: 696 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 741



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 194/386 (50%), Gaps = 1/386 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   +A  +F  +  +G  P + TYT L++ L      K  + L  ++ +DG+ P+
Sbjct: 500 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 559

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ +NA+IN   E+  +  A  +   M  +G      TYN +IKGY  +G P++++ ++ 
Sbjct: 560 TVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMN 619

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M Q +    N  TYN +++ +C   +   A  ++  M   G +PD  +Y  L   + + 
Sbjct: 620 NMLQ-RGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKI 678

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +   A  +  EM ++ + PNE T   ++ GYCK+  ++ A   L  MK     PN+  +
Sbjct: 679 SKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTY 738

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N LI G     +  G ++   +M E G+ P+VVT++ ++D     G      E+F+ M++
Sbjct: 739 NVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIE 798

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G  P++  +S L +   + G+ ++AE++   + ++G+ P+ + +  +I  +  + K++ 
Sbjct: 799 QGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEH 858

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWG 389
           A +   +M + G  P L TY  L+ G
Sbjct: 859 AFNFLGRMIKAGCQPTLWTYGVLIKG 884



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 188/404 (46%), Gaps = 1/404 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++ EG +P L+ Y  ++ AL +        +++ KV +  M PD+  + +MI       +
Sbjct: 376 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 435

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D A+++F +M   GC+P T TY+TLI G  + G+  E+  L++ M     + P   T  
Sbjct: 436 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMIL-HGILPTAHTCT 494

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
             + A C     E+AW +   M   G +P+  TY  L       G    A  +   M  +
Sbjct: 495 GPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRD 554

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            V PN  T   +++   +   ++ A   L  M    +  N+V +N +IKG+  + D    
Sbjct: 555 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKA 614

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
              +  M + G   ++VT++TI+  +  +G       I D M   G +PD   ++ L  G
Sbjct: 615 MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 674

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           + +  + + A  +   M   G+ PN V +T +I G+C   K+  A S+ E M   G  PN
Sbjct: 675 FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 734

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           ++TY  L+ G  +      AEEL +VM E+G+ P   T   + D
Sbjct: 735 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMID 778



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/442 (23%), Positives = 178/442 (40%), Gaps = 31/442 (7%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            G    A  I + + + G +P   +YT L+    +  + +S   L +++  DG+ P+ + +
Sbjct: 644  GNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTY 703

Query: 68   NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQL 124
             A+I+   +   +D A  + + MK SGC+P   TYN LI G     N    EE  K++  
Sbjct: 704  TALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI- 762

Query: 125  MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
               ++ + PN  TY  ++   C   S   A  +  KM+  G  P+ +TY++L RA  Q G
Sbjct: 763  ---EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEG 819

Query: 185  ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
            +   AE +  E++ + + P+E T   ++  Y   G +E A  FL RM +    P L  + 
Sbjct: 820  KVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYG 879

Query: 245  SLIKGF------------------------LDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
             LIKG                             D D V      + E      V   + 
Sbjct: 880  VLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNA 939

Query: 281  IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
            ++   S+AG   +  E+   M+  G+ PD   ++ L    +R      A  +   M   G
Sbjct: 940  LVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQG 999

Query: 341  VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
               ++  +  +I   C   + + A   +E M     NP+      L+ G           
Sbjct: 1000 CEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCM 1059

Query: 401  ELLQVMEEKGVRPKKSTIQLVA 422
            E L +ME +   P      ++A
Sbjct: 1060 EFLHIMETRRYMPSFHIYTILA 1081



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 138/300 (46%)

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+++  SK ++    + +  +  SG++     Y+ L    ++ G T         M +  
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           V+PN      +++  CK+GN+ DA   + ++ E E+ P+   + S+I G     D D   
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           +    M + G +P+ VT+ST+++    +G + +  ++  +M+  GI P  H  +      
Sbjct: 441 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 500

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
              G  + A  +   M+  G  PNV  +T +ISG C +  ++ A+ ++ +M   G+ PN 
Sbjct: 501 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 560

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            TY  L+    E ++   A  +L +M   G+     T   +   +  +G  ++A  V+ +
Sbjct: 561 VTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNN 620



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 139/322 (43%), Gaps = 26/322 (8%)

Query: 4    LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            L   G    A  +FN +IE+G  P L+TY++L+ AL ++ + +   +L +++E+ G+ PD
Sbjct: 780  LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 839

Query: 64   SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             I +  MI A   SG V+ A     +M  +GC+PT  TY  LIKG  N     E L   Q
Sbjct: 840  EITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN-----EYLLADQ 894

Query: 124  LMSQDKNVKPNDRTYNILVRAWCS---KNSIEEAWNVVYKMVASGIQP--DAVTYNTLAR 178
             ++   +V PN           CS   + + ++A +V+   +A  + P       N L  
Sbjct: 895  RLAALPDVVPN-----------CSFGYQTTDQDAVSVMSAKLAE-LDPGLSVQVQNALVS 942

Query: 179  AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM--KELEV 236
              +  G  + A ++L  M +  + P++     ++    +  N++ AM     M  +  EV
Sbjct: 943  NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEV 1002

Query: 237  HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            H N   +  LI     +            M      PD V  + ++D     G    C E
Sbjct: 1003 HLN--GYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCME 1060

Query: 297  IFDDMVKAGIEPDIHVFSILAK 318
                M      P  H+++ILA+
Sbjct: 1061 FLHIMETRRYMPSFHIYTILAR 1082


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 197/407 (48%), Gaps = 1/407 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   EA  +   ++  G +P  ITY  LV  L +  +      L+ ++ +D  +PD+I 
Sbjct: 340 EGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 399

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I       +  +A ++  +M+++G  P   TY+ +I G    G+PE++  LL+ M+
Sbjct: 400 YNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 459

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K +KPN   Y  L+  +C + ++  A  +  KM    + PD   YN+L    ++ G  
Sbjct: 460 T-KGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRV 518

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             + +   +MQ   + PNE T   ++ GY K G++E A + + RM +  + PN V++  L
Sbjct: 519 EESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDL 578

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           ++ +    D + V      M + GV  D   +  ++   SS+G M     +   + K G 
Sbjct: 579 LESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGS 638

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD+HV+S L  G  +  + +KA  IL  M K GV PN+V +  +I G C +  +  A +
Sbjct: 639 VPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARN 698

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           ++  +   G+ PN  TY +L+ G  +      A  L   M   G+ P
Sbjct: 699 VFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITP 745



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/441 (24%), Positives = 215/441 (48%), Gaps = 36/441 (8%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P   TY  L+  L + +R     +L+ ++    +KP+ +++  +I+     GN DEA
Sbjct: 287 GLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEA 346

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            K+ ++M  +G +P   TY+ L++G   +G+ + +  LL+ M +D + +P+  TYN+++ 
Sbjct: 347 FKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH-RPDTITYNLIIE 405

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
                +S ++A+ ++ +M  +GI P+  TY+ +     Q GE  +A  +L EM    ++P
Sbjct: 406 GHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKP 465

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N      ++SGYC+EGN+  A     +M ++ V P+L  +NSLI G   +   +   K  
Sbjct: 466 NAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYF 525

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M+E G+ P+  T+S ++  +   G +   +++   M+  G++P+  ++  L + Y ++
Sbjct: 526 AQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKS 585

Query: 324 GEPQKAESILTSM---------RKYG--VH------------------------PNVVMF 348
            + +K  S   SM         R YG  +H                        P+V ++
Sbjct: 586 DDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVY 645

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           +++ISG C     ++A  I ++M + G++PN+  Y  L+ G  ++     A  +   +  
Sbjct: 646 SSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILA 705

Query: 409 KGVRPKKSTIQLVADSWRAIG 429
           KG+ P   T   + D    +G
Sbjct: 706 KGLVPNCVTYTSLIDGSCKVG 726



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 191/406 (47%), Gaps = 2/406 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+P +A  +   +  +G +P    Y  L++   R+        +  K+ K  + PD
Sbjct: 442 LCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 501

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +N++I   S+ G V+E+ K F +M++ G  P   TY+ LI GY   G  E + +L+Q
Sbjct: 502 LYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQ 561

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D  +KPND  Y  L+ ++   + IE+  +    M+  G+  D   Y  L    +  
Sbjct: 562 RM-LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 620

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A ++L  ++ N   P+      ++SG CK  + E A   L  M +  V PN+V +
Sbjct: 621 GNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCY 680

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+LI G     D          +   G+ P+ VT+++++D     G +     ++++M+ 
Sbjct: 681 NALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLA 740

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GI PD  V+S+L  G   AG+ ++A  ++  M   G H ++  F  ++ G+C   KMQ 
Sbjct: 741 TGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQE 799

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
            + +   +   G+ PN  T E ++ G  EA +      +   +++K
Sbjct: 800 TLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 845



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/419 (24%), Positives = 205/419 (48%), Gaps = 2/419 (0%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           + + + A  + + F +   ++ ++ + G   +++ +N +I     SG V+EA    + M+
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
           D G  P   TY  LI G     +  E+  LL  MS  + +KPN   Y  L+  +  + + 
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAE-LKPNVVVYANLIDGFMREGNA 343

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           +EA+ ++ +MVA+G+QP+ +TY+ L R   + G+  RA  +L +M  +  RP+  T  +I
Sbjct: 344 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 403

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           + G+ +  + +DA R L  M+   + PN+  ++ +I G     + +     L  M   G+
Sbjct: 404 IEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 463

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           KP+   ++ ++  +   G +    EIFD M K  + PD++ ++ L  G  + G  +++  
Sbjct: 464 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 523

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
               M++ G+ PN   ++ +I G+     ++ A  + ++M + G+ PN   Y  LL  Y 
Sbjct: 524 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 583

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           ++    +     + M ++GV        ++  +  + G    A RVL   E++  S+P+
Sbjct: 584 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKN-GSVPD 641



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 167/374 (44%), Gaps = 49/374 (13%)

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           + A+C     + A  V+ +M   G   + VTYN L     + G    A     +M++  +
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            P+  T G +++G CK     +A   L  M   E+ PN+VV+ +LI GF+   ++D   K
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 348

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK------------------ 303
            +  M   GV+P+ +T+  ++      G M +   +   MV+                  
Sbjct: 349 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 408

Query: 304 -----------------AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
                            AGI P+++ +SI+  G  ++GEP+KA  +L  M   G+ PN  
Sbjct: 409 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 468

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
           ++  +ISG+C    +  A  I++KM ++ + P+L  Y +L++G  +  +   + +    M
Sbjct: 469 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 528

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSM------PNKKDEI-AVES 459
           +E+G+ P + T   +   +   G        L+SAE+  Q M      PN    I  +ES
Sbjct: 529 QERGLLPNEFTYSGLIHGYLKNG-------DLESAEQLVQRMLDTGLKPNDVIYIDLLES 581

Query: 460 IHRKQNLSASNSTF 473
             +  ++   +STF
Sbjct: 582 YFKSDDIEKVSSTF 595



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/401 (22%), Positives = 169/401 (42%), Gaps = 23/401 (5%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A  +   +++ G +P  + Y  L+ +  +    + + S    +   G+  D+ ++
Sbjct: 551 GDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIY 610

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+  S SGN++ A ++   ++ +G  P    Y++LI G       E++  +L  MS+
Sbjct: 611 GILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSK 670

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K V PN   YN L+   C    I  A NV   ++A G+ P+ VTY +L     + G+  
Sbjct: 671 -KGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDIS 729

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +  EM    + P+     ++ +G    G++E AM FL     L  H ++  FN+L+
Sbjct: 730 NAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM-FLIEEMFLRGHASISSFNNLV 788

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD-------- 299
            GF          K L ++   G+ P+ +T   I+   S AG + +   IF         
Sbjct: 789 DGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSE 848

Query: 300 -----------DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
                      DM+  G  P + V   + + + + G   KA  +   +           +
Sbjct: 849 SAARHFSSLFMDMINQGKIP-LDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSY 907

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIG-INPNLKTYETLLW 388
             ++   C   K+  A+++ ++M + G + P L     + W
Sbjct: 908 LAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVALLGIFW 948


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 206/420 (49%), Gaps = 34/420 (8%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P +++Y+T++     + +     +L  ++   G+ PD + +  +I+   ++   D A  +
Sbjct: 201 PNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAV 260

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD------------------ 128
           FQ+M D+G KP   TYN LI GY ++GK +E +++L+ MS                    
Sbjct: 261 FQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCK 320

Query: 129 ----------------KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT 172
                           K +KP+  TY I++  + +K ++ E  +++  MVA+GI P+   
Sbjct: 321 NGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHI 380

Query: 173 YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMK 232
           +N    AYA+ G   +A  +  +M+   + P+  + G ++   CK G ++DA     +M 
Sbjct: 381 FNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMI 440

Query: 233 ELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMG 292
              V P++VVF+SL+ G   +   + V++    M   G+ P++V F+TI+      G + 
Sbjct: 441 NEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVM 500

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           + Q + D +   G+ PD+  ++ L  G+  AG   +A  +L  M   G+ P+   + T++
Sbjct: 501 EGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLL 560

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
            G+C A ++  A S + KM   GI P + TY T+L G  + K+   A+EL   M   G +
Sbjct: 561 HGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 620



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 214/465 (46%), Gaps = 41/465 (8%)

Query: 16  IFNCLIEEGH---RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           +FN ++ + +    P   TY+ L+    R    +   +    + K G + D I+ N ++N
Sbjct: 78  LFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLN 137

Query: 73  ACSESGNVDEAMKIF-QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK-- 129
              +   V EAM +  Q+M + GC P T +YN L+KG  N  + EE+L+LL +M+ D+  
Sbjct: 138 GLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVW 197

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
           +  PN  +Y+ ++  + ++  +++ +N+  +M+  GI PD VTY T+     +     RA
Sbjct: 198 SCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRA 257

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
           E +  +M +N V+PN  T   ++ GY   G  ++ +R L  M      PN   + SL+  
Sbjct: 258 EAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNY 317

Query: 250 FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
                           M   G+KP V T+  ++  +++ G + +  ++ + MV  GI P+
Sbjct: 318 LCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPN 377

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYG----------------------------- 340
            H+F+I    Y + G   KA  I   MR+ G                             
Sbjct: 378 HHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFN 437

Query: 341 ------VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
                 V P++V+F++++ G C   K ++   ++ +M  +GI+PN+  + T+L    +  
Sbjct: 438 QMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEG 497

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           +    + L+  +E  GVRP   +   + D     G   EA ++L+
Sbjct: 498 RVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLE 542



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 129/573 (22%), Positives = 239/573 (41%), Gaps = 63/573 (10%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F  +I+ G +P + TY  L+       ++K ++ ++ ++   G KP+   + +++N
Sbjct: 257 AEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLN 316

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              ++G   EA   F  M   G KP+ +TY  ++ GY   G   E   LL LM  +  + 
Sbjct: 317 YLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVAN-GIS 375

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE-- 190
           PN   +NI   A+     I++A ++  KM   G+ PDAV+Y  L  A  + G    AE  
Sbjct: 376 PNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVK 435

Query: 191 ---------------------------------QMLFEMQNNQVRPNERTCGIIVSGYCK 217
                                            ++ FEM N  + PN      I+   CK
Sbjct: 436 FNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCK 495

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
           EG + +  R +  ++ + V P+++ +N+LI G       D   K L  M   G+KPD  +
Sbjct: 496 EGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFS 555

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           ++T++  +  AG +      F  M+  GI P +  ++ +  G  +     +A+ +  +M 
Sbjct: 556 YNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMI 615

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
             G   ++  +  +++G C +  +  A+ +++ +C  G+  N+ T+  ++    +  +  
Sbjct: 616 NSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKE 675

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK--DEI 455
            A +L   +   G+     T +LV ++    G   E   +  SA E   + PN +  + +
Sbjct: 676 DAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLF-SAMEKNGTAPNSQMLNAL 734

Query: 456 AVESIHR--------------KQNLSASNSTFLQIPGVVSSE----HNGSSAAKIR---- 493
               +HR              ++N S   ST   +  + SS+    H  S   K R    
Sbjct: 735 VRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNE 794

Query: 494 --SQIVLRSDTVWTATKSLFVNTYGSGVQPMVV 524
             S  +++         SLF      G+ P VV
Sbjct: 795 ANSSALIKKARRIDDAYSLFREMLMKGLTPDVV 827



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/420 (22%), Positives = 204/420 (48%), Gaps = 3/420 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EA + F+ +I +G +P++ TY  ++     +     +  L++ +  +G+
Sbjct: 315 LNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGI 374

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES-L 119
            P+  +FN   +A ++ G +D+AM IF KM+  G  P   +Y  LI     +G+ +++ +
Sbjct: 375 SPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEV 434

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K  Q++++   V P+   ++ LV   C+ +  E+   + ++M+  GI P+ V +NT+   
Sbjct: 435 KFNQMINE--GVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCN 492

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G     ++++  ++   VRP+  +   ++ G+C  G +++A + L  M  + + P+
Sbjct: 493 LCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPD 552

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
              +N+L+ G+      D        M   G+ P VVT++TI+          + +E++ 
Sbjct: 553 SFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYL 612

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M+ +G + DI+ ++I+  G  ++    +A  +  ++   G+  N++ F  +I       
Sbjct: 613 NMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGG 672

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           + + AM ++  +   G+  N+ TY  ++    E       + L   ME+ G  P    + 
Sbjct: 673 RKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLN 732



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 101/479 (21%), Positives = 207/479 (43%), Gaps = 48/479 (10%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKS-------ILSLISKVEKD---GMK 61
           +A  +F+ L+      +++ +  L+AA++R    +S       ++SL +++ +D    + 
Sbjct: 32  DALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVA 91

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P+   ++ +I      G+++     F  +  +G +      N L+ G  +  +  E++ +
Sbjct: 92  PNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDV 151

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGI---QPDAVTYNTLAR 178
           L     +    P+  +YNIL++  C++   EEA  +++ M    +    P+ V+Y+T+  
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVIN 211

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            +   G+  +   +  EM +  + P+  T   ++ G CK    + A     +M +  V P
Sbjct: 212 GFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKP 271

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLME---------------------------EF-- 269
           N+  +N LI G+L I     V + L  M                             F  
Sbjct: 272 NIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFF 331

Query: 270 ------GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
                 G+KP V T+  ++  +++ G + +  ++ + MV  GI P+ H+F+I    Y + 
Sbjct: 332 DSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKC 391

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G   KA  I   MR+ G+ P+ V +  +I   C   ++  A   + +M   G+ P++  +
Sbjct: 392 GIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVF 451

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
            +L++G     +  + EEL   M   G+ P       +  +    G   E +R++ S E
Sbjct: 452 SSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIE 510



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 111/522 (21%), Positives = 230/522 (44%), Gaps = 34/522 (6%)

Query: 4    LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            L  +G+  E   + + +   G RP +I+Y TL+              L+  +   G+KPD
Sbjct: 493  LCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPD 552

Query: 64   SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            S  +N +++   ++G +D A   F+KM  +G  P   TYNT++ G     +  E+ K L 
Sbjct: 553  SFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEA-KELY 611

Query: 124  LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            L   +   K +  TYNI++   C  N ++EA  +   + + G+Q + +T+N +  A  + 
Sbjct: 612  LNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKG 671

Query: 184  GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            G    A  +   +  N +  N  T  ++V    +EG++E+       M++    PN  + 
Sbjct: 672  GRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQML 731

Query: 244  NSLIKGFLDIKDSDGVDKALTLMEE--FGVKPDVVT-----FST---------------I 281
            N+L++  L   D       L+ ++E  F V+    +     FS+               I
Sbjct: 732  NALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRI 791

Query: 282  MDAWSSAGLMGKCQEI------FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
            ++  +S+ L+ K + I      F +M+  G+ PD+  ++ +  G  + G   +A+ +  S
Sbjct: 792  LNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLS 851

Query: 336  MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
            M       N+  +  +++G C +  +  A  +++ +C  G+  N+ T+  ++    +  +
Sbjct: 852  MINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGR 911

Query: 396  PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEI 455
               A +L   +   G+ P   T +LVA++    G   E   +  + E+    + ++    
Sbjct: 912  KEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNA 971

Query: 456  AVESIHRKQNLSASNSTFLQIPGVVSSEHNGSSAAKIRSQIV 497
             V  + ++ ++S + +   ++      E N S  A   S+++
Sbjct: 972  LVRRLLQRGDISRAGAYLSKL-----DEKNFSLEASTTSELI 1008



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 164/382 (42%), Gaps = 28/382 (7%)

Query: 1    MNILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
             NI++G     G+  +A  +F  +   G    ++TY  +V  L  +   +   SL S +E
Sbjct: 661  FNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAME 720

Query: 57   KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
            K+G  P+S + NA++      G++  A     K+ +       ST + LI          
Sbjct: 721  KNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLI---------- 770

Query: 117  ESLKLLQLMSQDK---NVKPNDRTYNILVRAWCSK-----NSIEEAWNVVYKMVASGIQP 168
                   + S D+   + K   + Y IL  A  S        I++A+++  +M+  G+ P
Sbjct: 771  ------SIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTP 824

Query: 169  DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
            D VTYNT+     Q G    A+++   M N++ + N  T  II++G CK   +++A +  
Sbjct: 825  DVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMF 884

Query: 229  YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
              +    +  N++ FN +I   L     +        +   G+ PDVVT+  + +     
Sbjct: 885  QSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEE 944

Query: 289  GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
            G + +   +F  M K+G   D  + + L +  ++ G+  +A + L+ + +          
Sbjct: 945  GSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTT 1004

Query: 349  TTVISGWCNAVKMQRAMSIYEK 370
            + +IS +        A S+ EK
Sbjct: 1005 SELISLFSRGEYQHHAKSLPEK 1026


>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
           [Vitis vinifera]
          Length = 811

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 207/413 (50%), Gaps = 11/413 (2%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           +++ L +  R  +  SL+  + KDG   D   + +MI A + +G   EA+ +F+KM++ G
Sbjct: 171 IISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVG 230

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
           CKPT  TYN ++  YG +G P   +  L    +   + P+  TYN L+      N  EEA
Sbjct: 231 CKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEA 290

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
             V+ +M  +G  PD VTYN L   Y +   +  A ++L EM+ N   P+  T   ++S 
Sbjct: 291 AGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISA 350

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK-ALTLMEEF---G 270
           Y ++G +EDA+    +M E  + P++  + +L+ GF    +  G DK A+ + EE    G
Sbjct: 351 YARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGF----EKAGKDKAAVQIFEEMRNEG 406

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
            KP++ TF+ ++    + G   +  ++F+D+      PDI  ++ L   + + G   +  
Sbjct: 407 CKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVS 466

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +   M++ G  P    F T+IS +       +AM++Y++M E G+NP+L +Y  +L   
Sbjct: 467 GVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAAL 526

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
                  ++E++L  M++   +P + T         A    +E +R+   AEE
Sbjct: 527 ARGGLWKQSEKVLAEMKDGRCKPNELT---YCSLLHAYANGKEIERMCALAEE 576



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 207/427 (48%), Gaps = 1/427 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  + N ++E+G +P + TYTTL++   +  + K+ + +  ++  +G KP+   F
Sbjct: 355 GLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTF 414

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           NA+I      G   E MK+F+ +K   C P   T+NTL+  +G  G   E   + + M +
Sbjct: 415 NALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKR 474

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              V P   T+N L+ ++    S ++A  V  +M+ +G+ PD  +YN +  A A+ G   
Sbjct: 475 AGFV-PERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWK 533

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           ++E++L EM++ + +PNE T   ++  Y     +E        +    + P  V+  +L+
Sbjct: 534 QSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLV 593

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
                       ++A   + + G  PD+ T + ++  +    ++ K  EI D M + G  
Sbjct: 594 LVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFT 653

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P +  ++ L   Y R+   +++E IL  +   G+ P+++ + TVI  +C   +M+ A  +
Sbjct: 654 PSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRV 713

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
             +M E G  P++ TY T +  Y        A +++  M + G +P +ST   + D +  
Sbjct: 714 LSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCK 773

Query: 428 IGLAREA 434
           +    EA
Sbjct: 774 LNRRDEA 780



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 212/450 (47%), Gaps = 37/450 (8%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDGMKP 62
               G+  EA  +F  + E G +PTLITY  ++    +    +  ++ L+ +++  G+ P
Sbjct: 210 FTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAP 269

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           DS  +N +I+ C      +EA  + ++MK +G  P   TYN L+  YG   + +E++++L
Sbjct: 270 DSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVL 329

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           Q M +     P+  TYN L+ A+     +E+A  +  +MV  GI+PD  TY TL   + +
Sbjct: 330 QEM-EGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEK 388

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+   A Q+  EM+N   +PN  T   ++  +   G   + M+    +K  +  P++V 
Sbjct: 389 AGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVT 448

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +N+L+  F        V      M+  G  P+  TF+T++ ++S  G   +   ++  M+
Sbjct: 449 WNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRML 508

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           +AG+ PD+  ++ +     R G  +++E +L  M+     PN + + +++  + N  +++
Sbjct: 509 EAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIE 568

Query: 363 RAMSIYEKM---------------------CEI--------------GINPNLKTYETLL 387
           R  ++ E++                     C++              G +P++ T   ++
Sbjct: 569 RMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMV 628

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             YG  +   +A E+L  M+  G  P  +T
Sbjct: 629 SIYGRRQMVAKANEILDCMKRGGFTPSLTT 658



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 168/350 (48%), Gaps = 1/350 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  E   +F  +      P ++T+ TL++   +      +  +  ++++ G  P+   
Sbjct: 424 RGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDT 483

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           FN +I++ S  G+ D+AM ++++M ++G  P  S+YN ++      G  ++S K+L  M 
Sbjct: 484 FNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEM- 542

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +D   KPN+ TY  L+ A+ +   IE    +  ++ +  I+P AV   TL    ++    
Sbjct: 543 KDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLL 602

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
              E+   E++     P+  T   +VS Y +   +  A   L  MK     P+L  +NSL
Sbjct: 603 METERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSL 662

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +  +    + +  ++ L  +   G++PD+++++T++ A+   G M     +  +M ++G 
Sbjct: 663 MYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGP 722

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
            PDI  ++     Y       +A  ++  M K+G  PN   + +++  +C
Sbjct: 723 APDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYC 772


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 193/387 (49%), Gaps = 2/387 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT  TY  L+   TR  R +  L+   ++ + G++ + I+ N ++    E+   DEA+ I
Sbjct: 112 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 171

Query: 87  -FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV-KPNDRTYNILVRA 144
              +  + GC P   +Y+ L+K   + GK  ++  LL++M++   V  PN   YN ++  
Sbjct: 172 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 231

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +  +  + +A ++  +MV  GI PD VTYN++  A  +     +AE  L +M N +V PN
Sbjct: 232 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 291

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   ++ GY   G  ++A+R    M+   + P++V  + L+                 
Sbjct: 292 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 351

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M   G  PDV +++ +++ +++ G +    ++FD M+  GI PD + F++L K Y   G
Sbjct: 352 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 411

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              KA  I   MR +GV P+VV + TVI+  C   KM  AM  + +M + G+ P+   Y 
Sbjct: 412 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 471

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGV 411
            L+ G+       +A+EL+  +   G+
Sbjct: 472 CLIQGFCTHGSLLKAKELISEIMNNGM 498



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 202/424 (47%), Gaps = 7/424 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L   GK  EA  +F+ +  +G  P + +Y  ++     +     +  L   +  DG+
Sbjct: 334 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 393

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   FN +I A +  G +D+AM IF +M+D G KP   TY T+I     +GK +++++
Sbjct: 394 APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 453

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M  D+ V P+   YN L++ +C+  S+ +A  ++ +++ +G+  D V ++++    
Sbjct: 454 KFNQMI-DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 512

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A+ +     N  + P+     +++ GYC  G ME A+R    M    + PN+
Sbjct: 513 CKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 572

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V + +L+ G+  I     +D+ L+L  E    G+KP  + +S I+D    AG     +  
Sbjct: 573 VGYGTLVNGYCKIGR---IDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMK 629

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F +M ++GI  DI  ++I+ +G  +     +A  +   +R   V  N++   T+I G   
Sbjct: 630 FHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQ 689

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             +++ A  ++  +    + P++ TY  ++    +      AE++   M+  G  P    
Sbjct: 690 TRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRL 749

Query: 418 IQLV 421
           +  V
Sbjct: 750 LNHV 753



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 217/474 (45%), Gaps = 36/474 (7%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  ++A  +F  +++ G  P L+TY ++V AL + +      + + ++    + P++  
Sbjct: 235 EGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWT 294

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I   S +G   EA+++F++M+     P   T + L+      GK +E+  +   M+
Sbjct: 295 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMA 354

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K   P+  +YNI++  + +K  + +  ++   M+  GI PD  T+N L +AYA  G  
Sbjct: 355 M-KGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGML 413

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A  +  EM+++ V+P+  T   +++  C+ G M+DAM    +M +  V P+   +N L
Sbjct: 414 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 473

Query: 247 IKGF----------------------LDIKDSDGVDKALT-------------LMEEFGV 271
           I+GF                      LDI     +   L              L    G+
Sbjct: 474 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 533

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            PD V ++ +MD +   G M K   +FD MV AGIEP++  +  L  GY + G   +  S
Sbjct: 534 HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLS 593

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +   M + G+ P+ ++++ +I G   A +   A   + +M E GI  ++ TY  +L G  
Sbjct: 594 LFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLF 653

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
           + +    A  L + +    V+    T+  + D         EAK +  S    R
Sbjct: 654 KNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSR 707



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 204/423 (48%), Gaps = 9/423 (2%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM--KPDSILFNAMINACSESGN 79
           E G  P + +Y+ L+ +L  Q +      L+  + + G    P+ + +N +I+   + G+
Sbjct: 178 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 237

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V++A  +F++M   G  P   TYN+++         +++   L+ M  +K V PN+ TYN
Sbjct: 238 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV-NKRVLPNNWTYN 296

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+  + S    +EA  V  +M    I PD VT + L  +  +YG+   A  +   M   
Sbjct: 297 NLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK 356

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+  +  I+++GY  +G + D       M    + P+   FN LIK +    +   +
Sbjct: 357 GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY---ANCGML 413

Query: 260 DKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           DKA+ +   M + GVKPDVVT+ T++ A    G M    E F+ M+  G+ PD + ++ L
Sbjct: 414 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 473

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
            +G+   G   KA+ +++ +   G+H ++V F+++I+  C   ++  A +I++    +G+
Sbjct: 474 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 533

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
           +P+   Y  L+ GY    +  +A  +   M   G+ P       + + +  IG   E   
Sbjct: 534 HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLS 593

Query: 437 VLK 439
           + +
Sbjct: 594 LFR 596



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/435 (22%), Positives = 205/435 (47%), Gaps = 1/435 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F  +      P ++T + L+ +L +  + K    +   +   G  PD   +
Sbjct: 306 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 365

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N M+N  +  G + +   +F  M   G  P   T+N LIK Y N G  ++++ +   M +
Sbjct: 366 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM-R 424

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D  VKP+  TY  ++ A C    +++A     +M+  G+ PD   YN L + +  +G   
Sbjct: 425 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 484

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A++++ E+ NN +  +      I++  CK G + DA         + +HP+ VV+N L+
Sbjct: 485 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 544

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G+  +   +   +    M   G++P+VV + T+++ +   G + +   +F +M++ GI+
Sbjct: 545 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIK 604

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P   ++SI+  G   AG    A+     M + G+  ++  +  V+ G         A+ +
Sbjct: 605 PSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFL 664

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           ++++  + +  N+ T  T++ G  + ++   A++L   +    + P   T  ++  +   
Sbjct: 665 FKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIK 724

Query: 428 IGLAREAKRVLKSAE 442
            GL  EA+ +  S +
Sbjct: 725 EGLVEEAEDMFSSMQ 739



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/369 (22%), Positives = 179/369 (48%), Gaps = 7/369 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  IFN + + G +P ++TY T++AAL R  +    +   +++   G+ PD   +
Sbjct: 411 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 470

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I      G++ +A ++  ++ ++G       ++++I     +G+  ++  +  L + 
Sbjct: 471 NCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL-TV 529

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  + P+   YN+L+  +C    +E+A  V   MV++GI+P+ V Y TL   Y + G   
Sbjct: 530 NVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRID 589

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
               +  EM    ++P+     II+ G  + G    A    + M E  +  ++  +N ++
Sbjct: 590 EGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVL 649

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +G      +   D+A+ L +E     VK +++T +T++D       + + +++F  + ++
Sbjct: 650 RGLF---KNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS 706

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
            + P +  +SI+    ++ G  ++AE + +SM+  G  PN  +   V+       ++ RA
Sbjct: 707 RLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 766

Query: 365 MSIYEKMCE 373
            +   K+ E
Sbjct: 767 GAYLSKIDE 775



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 112/241 (46%), Gaps = 3/241 (1%)

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD-GVDK 261
           P   T  I++    +    E A+ F  ++    +  N+++ N L++GF + K +D  +D 
Sbjct: 112 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 171

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG--IEPDIHVFSILAKG 319
            L    E G  PDV ++S ++ +    G  G+  ++   M + G    P++  ++ +  G
Sbjct: 172 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 231

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           + + G+  KA  +   M + G+ P++V + +V+   C A  M +A +   +M    + PN
Sbjct: 232 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 291

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             TY  L++GY    Q   A  + + M    + P   T+ ++  S    G  +EA+ V  
Sbjct: 292 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 351

Query: 440 S 440
           +
Sbjct: 352 T 352



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 134/296 (45%), Gaps = 4/296 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  +A  IF+  +  G  P  + Y  L+       + +  L +   +   G+
Sbjct: 509 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 568

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ + +  ++N   + G +DE + +F++M   G KP+T  Y+ +I G    G+   +  
Sbjct: 569 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKM 628

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M++   +  +  TYNI++R        +EA  +  ++ A  ++ + +T NT+    
Sbjct: 629 KFHEMTE-SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 687

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q      A+ +   +  +++ P+  T  I+++   KEG +E+A      M+     PN 
Sbjct: 688 FQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNS 747

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            + N +++  L   +       L+ ++E     + +T   ++D +SS    G C+E
Sbjct: 748 RLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSK---GTCRE 800



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 36/256 (14%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  +F+ ++  G  P ++ Y TLV    +  R    LSL  ++ + G+KP +IL+
Sbjct: 551 GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILY 610

Query: 68  NAMINACSESGNV-----------------------------------DEAMKIFQKMKD 92
           + +I+   E+G                                     DEA+ +F++++ 
Sbjct: 611 SIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRA 670

Query: 93  SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIE 152
              K    T NT+I G     + EE+  L   +S+ + V P+  TY+I++     +  +E
Sbjct: 671 MNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLV-PSVVTYSIMITNLIKEGLVE 729

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           EA ++   M  +G +P++   N + R   +  E  RA   L ++          T  ++V
Sbjct: 730 EAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLV 789

Query: 213 SGYCKEGNMEDAMRFL 228
             +  +G   + +RFL
Sbjct: 790 DLFSSKGTCREQIRFL 805



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + P  H ++IL     RA  P+ A +    + + G+  N+++   ++ G+C A +   A+
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169

Query: 366 SI-YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
            I   +  E+G  P++ +Y  LL    +  +  +A++LL++M E G
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGG 215


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 203/412 (49%), Gaps = 5/412 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P L TYT+LV    R    +    +   + +     +++ +  +I+   E+G + EA++ 
Sbjct: 222 PDLFTYTSLVLGYCRNDDVERACGVFCVMPRR----NAVSYTNLIHGLCEAGKLHEALEF 277

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           + +M++ GC PT  TY  L+      G+  E+L L   M +++  +PN  TY +L+   C
Sbjct: 278 WARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEM-RERGCEPNVYTYTVLIDYLC 336

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            +  ++EA  ++ +MV  G+ P  V +N L  +Y + G    A  +L  M++ +V PN R
Sbjct: 337 KEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVR 396

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   ++ G+C+  +M+ AM  L +M E ++ P++V +N+LI G  ++   D   +   LM
Sbjct: 397 TYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLM 456

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              G  PD  TF+  M      G +G+  +I + + +  ++ + H ++ L  GY +AG+ 
Sbjct: 457 IRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKI 516

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           + A S+   M      PN + F  +I G     K+Q AM + E M +  + P L TY  L
Sbjct: 517 EHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNIL 576

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           +    +     RA E+L  +   G +P   T      ++ + G   EA+ ++
Sbjct: 577 VEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMV 628



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 200/418 (47%), Gaps = 1/418 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK HEA   +  + E+G  PT+ TYT LV AL    R    LSL  ++ + G +P+
Sbjct: 265 LCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPN 324

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +  +I+   + G +DEA+K+  +M + G  P+   +N LI  Y   G  E+++ +L 
Sbjct: 325 VYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLG 384

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           LM + K V PN RTYN L+  +C   S++ A  ++ KMV S + PD VTYNTL     + 
Sbjct: 385 LM-ESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEV 443

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A ++   M  +   P++ T    +   C+ G + +A + L  +KE  V  N   +
Sbjct: 444 GVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAY 503

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            +LI G+      +        M      P+ +TF+ ++D     G +     + +DM K
Sbjct: 504 TALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAK 563

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
             ++P +H ++IL +  ++  +  +A  IL  +   G  PNVV +T  I  +C+  +++ 
Sbjct: 564 FDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEE 623

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           A  +  K+   G+  +   Y  L+  YG       A  +L+ M   G  P   T  ++
Sbjct: 624 AEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSIL 681



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 184/387 (47%), Gaps = 7/387 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  EA  +F  + E G  P + TYT L+  L ++ R    L +++++ + G+ P 
Sbjct: 300 LCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPS 359

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + FNA+I +  + G +++A+ +   M+     P   TYN LI G+      + ++ LL 
Sbjct: 360 VVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLN 419

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + K + P+  TYN L+   C    ++ A  +   M+  G  PD  T+N       + 
Sbjct: 420 KMVESK-LSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRM 478

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A Q+L  ++   V+ NE     ++ GYCK G +E A     RM   E  PN + F
Sbjct: 479 GRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITF 538

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N +I G   ++    V  A+ L+E+   F VKP + T++ +++         +  EI + 
Sbjct: 539 NVMIDG---LRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNR 595

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           ++ +G +P++  ++   K Y   G  ++AE ++  ++  GV  +  ++  +I+ +     
Sbjct: 596 LISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGL 655

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLL 387
           +  A  +  +M   G  P+  TY  L+
Sbjct: 656 LDSAFGVLRRMFGTGCEPSYLTYSILM 682



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/425 (24%), Positives = 193/425 (45%), Gaps = 23/425 (5%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P + TY  L+    R K     ++L++K+ +  + PD + +N +I+   E G VD A ++
Sbjct: 393 PNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRL 452

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F+ M   G  P   T+N  +     +G+  E+ ++L+ + ++K+VK N+  Y  L+  +C
Sbjct: 453 FRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESL-KEKHVKANEHAYTALIDGYC 511

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               IE A ++  +M+A    P+++T+N +     + G+   A  ++ +M    V+P   
Sbjct: 512 KAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLH 571

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T  I+V    KE + + A   L R+      PN+V + + IK +      +  ++ +  +
Sbjct: 572 TYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKI 631

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           +  GV  D   ++ +++A+   GL+     +   M   G EP    +SIL K  V     
Sbjct: 632 KNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLV----- 686

Query: 327 QKAESILTSMRKYGVHP--------NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
                 +   +K G +P        N+ +  T I  W + +       ++EKM E G  P
Sbjct: 687 ------IEKHKKEGSNPVGLDVSLTNISVDNTDI--W-SKIDFGITTVLFEKMAECGCVP 737

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           NL TY  L+ G  +  +   A  L   M E G+ P +     +  S   +G+  EA  +L
Sbjct: 738 NLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLL 797

Query: 439 KSAEE 443
            S  E
Sbjct: 798 DSMME 802



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/455 (23%), Positives = 203/455 (44%), Gaps = 54/455 (11%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A  +F  +I +G  P   T+   +  L R  R      ++  +++  +K +   +
Sbjct: 444 GVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAY 503

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            A+I+   ++G ++ A  +F++M    C P + T+N +I G    GK ++++ L++ M++
Sbjct: 504 TALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAK 563

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
             +VKP   TYNILV     +   + A  ++ ++++SG QP+ VTY    +AY   G   
Sbjct: 564 -FDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLE 622

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            AE+M+ +++N  V  +     ++++ Y   G ++ A   L RM      P+ + ++ L+
Sbjct: 623 EAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILM 682

Query: 248 KGFLDIKDSD------GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
           K  +  K         G+D +LT         ++   +T  D WS     G    +F+ M
Sbjct: 683 KHLVIEKHKKEGSNPVGLDVSLT---------NISVDNT--DIWSKIDF-GITTVLFEKM 730

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
            + G  P+++ +S L  G  + G    A S+   MR+ G+ P+ ++  +++S  C     
Sbjct: 731 AECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMF 790

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE--------------------- 400
             A+++ + M E     +L++Y+ L+ G  E     +AE                     
Sbjct: 791 GEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVL 850

Query: 401 --------------ELLQVMEEKGVRPKKSTIQLV 421
                         ELL +ME+ G R    T  ++
Sbjct: 851 IDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSML 885



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 179/391 (45%), Gaps = 22/391 (5%)

Query: 68  NAMINACSESGNVDEAMKIFQKMKDS----------GCKPTTSTYNTLIKGYGNVGKPEE 117
           N+MI +C+   +    + + ++M  +            K + ++YN L+         +E
Sbjct: 110 NSMIKSCTSPHDATFLLNLLRRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDE 169

Query: 118 SLKLLQLMSQDK--NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
            + L + M  D   +V PN  T N ++ ++C   ++  A     +++     PD  TY +
Sbjct: 170 MISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTS 229

Query: 176 LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
           L   Y +  +  RA  +   M     R N  +   ++ G C+ G + +A+ F  RM+E  
Sbjct: 230 LVLGYCRNDDVERACGVFCVMP----RRNAVSYTNLIHGLCEAGKLHEALEFWARMREDG 285

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMG 292
             P +  +  L+     + +S    +AL+L   M E G +P+V T++ ++D     G M 
Sbjct: 286 CFPTVRTYTVLVCA---LCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMD 342

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           +  ++ ++MV+ G+ P +  F+ L   Y + G  + A  +L  M    V PNV  +  +I
Sbjct: 343 EALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELI 402

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
            G+C    M RAM++  KM E  ++P++ TY TL+ G  E      A  L ++M   G  
Sbjct: 403 CGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFS 462

Query: 413 PKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           P + T          +G   EA ++L+S +E
Sbjct: 463 PDQWTFNAFMVCLCRMGRVGEAHQILESLKE 493



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 173/420 (41%), Gaps = 38/420 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L   G+  EAH I   L E+  +     YT L+    +  + +   SL  ++  +  
Sbjct: 472 MVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEEC 531

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLI----KGYGNVGKPE 116
            P+SI FN MI+   + G V +AM + + M     KPT  TYN L+    K Y +  +  
Sbjct: 532 LPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEY-DFDRAN 590

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           E L   +L+S     +PN  TY   ++A+CS+  +EEA  +V K+   G+  D+  YN L
Sbjct: 591 EILN--RLISS--GYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLL 646

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI-----IVSGYCKEGNMEDAMR----- 226
             AY   G    A  +L  M      P+  T  I     ++  + KEG+    +      
Sbjct: 647 INAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTN 706

Query: 227 -------------------FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
                                 +M E    PNL  ++ LI G   +   +        M 
Sbjct: 707 ISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMR 766

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
           E G+ P  +  ++++ +    G+ G+   + D M++      +  + +L  G       +
Sbjct: 767 EGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKE 826

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           KAE++  S+ + G + + V +  +I G      + +   +   M + G   + +TY  L+
Sbjct: 827 KAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLM 886



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 136/311 (43%), Gaps = 7/311 (2%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A+ I N LI  G++P ++TYT  + A   Q R +    ++ K++ +G+  DS ++N +IN
Sbjct: 589 ANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLIN 648

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
           A    G +D A  + ++M  +GC+P+  TY+ L+K        +E    + L     N+ 
Sbjct: 649 AYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNIS 708

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
            ++         W SK        +  KM   G  P+  TY+ L     + G    A  +
Sbjct: 709 VDN------TDIW-SKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSL 761

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
              M+   + P+E     ++S  CK G   +A+  L  M E     +L  +  LI G  +
Sbjct: 762 YHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFE 821

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
             + +  +     +   G   D V +  ++D  +  G + +C E+ + M K G       
Sbjct: 822 QMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPET 881

Query: 313 FSILAKGYVRA 323
           +S+L +   RA
Sbjct: 882 YSMLMQELNRA 892



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 21/96 (21%), Positives = 48/96 (50%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  + + ++E  H   L +Y  L+  L  Q   +   ++   + + G   D + +  +I
Sbjct: 792 EAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLI 851

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIK 107
           +  +++G VD+  ++   M+ +GC+    TY+ L++
Sbjct: 852 DGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQ 887


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 147/582 (25%), Positives = 266/582 (45%), Gaps = 62/582 (10%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + IL  K    +A  ++  + E G +PT++TY TL+ +  +  + +  L L+S++++ G 
Sbjct: 206 LRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGC 265

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +N +IN  S+ G  ++A  +  +M  +G K +  TYN LI GY N G   E+L 
Sbjct: 266 APNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALS 325

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M   K   P   TYN  +   C    + +A   +  M+A+ + PD V+YNTL   Y
Sbjct: 326 LQEEMVL-KGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGY 384

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G   +A  +  E+++  + P   T   ++ G C++G +E A +    M    + P++
Sbjct: 385 CRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDI 444

Query: 241 VVFNSLIKG------------FLDIKDSDGVD--------------------KALTLMEE 268
           V +  L+ G            F D    +G++                    +A +L EE
Sbjct: 445 VTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEE 504

Query: 269 F---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
               G  PD++ ++ ++D     G + +  E+   MV  G+ PD   ++ +   ++  G 
Sbjct: 505 MLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGR 564

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            +K   I   M   G+ P+VV +T +I G     +++RA   + +M E GI PN+ TY +
Sbjct: 565 LRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNS 624

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
           L+ G  + ++  +A      M EKG+ P K +  ++ +    +G  +EA  + K    DR
Sbjct: 625 LINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQM-LDR 683

Query: 446 QSMPNKKDEIAVESIHRKQNLSASNSTFLQIPG---VVSSEHNGSSAAKIRSQIVLRSDT 502
              P+                S ++S  L+  G    + + H  S+     +++ L S T
Sbjct: 684 GVQPD----------------SCTHSALLKQLGKDCKLQAVHGTSTMPT--AKVDLLSQT 725

Query: 503 VWTATKSLFVNTYGSGVQPMVVCRKQCSQ-VGTCGQFVNAYR 543
           V  AT    V++         + ++Q  Q + T  QFV+ YR
Sbjct: 726 VGAATALTSVSSIAENGH---ITKEQLRQNIPTKKQFVDPYR 764



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 191/407 (46%), Gaps = 7/407 (1%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           L+   +++   +  LS+  K+ K  + PD    N ++    +   + +A+++++ M + G
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 229

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
            KPT  TYNTL+  Y   GK ++ L LL  M Q +   PND TYN+L+     K   E+A
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEM-QRRGCAPNDVTYNVLINGLSKKGEFEQA 288

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
             ++ +M+ +G++  A TYN L   Y   G    A  +  EM      P   T    + G
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYG 348

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG---V 271
            CK G M DAM+ L  M    + P++V +N+LI G+  + +   + KA  L +E     +
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGN---LMKAFLLFDELRSIYL 405

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            P +VT++T++D     G +   Q++  +M+  GI PDI  ++IL  G  + G    A+ 
Sbjct: 406 FPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQE 465

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
               M   G+  +   + T I G        RA S+ E+M   G  P+L  Y  ++ G  
Sbjct: 466 FFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLC 525

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           +      A ELLQ M   GV P   T   +  +    G  R+ + + 
Sbjct: 526 KLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIF 572



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 132/288 (45%)

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           +  ++L+  +  K+ +E+  +V  KM+ S + PD    N + R         +A ++   
Sbjct: 165 KILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRT 224

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M    ++P   T   ++  YCK G ++  +  L  M+     PN V +N LI G     +
Sbjct: 225 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 284

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            +     +  M + G+K    T++ ++  + + G++ +   + ++MV  G  P +  ++ 
Sbjct: 285 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNS 344

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
              G  + G    A   L+ M    + P+VV + T+I G+C    + +A  +++++  I 
Sbjct: 345 FIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY 404

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           + P + TY TLL G     +   A++L   M  +G+ P   T  ++ +
Sbjct: 405 LFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVN 452


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 193/387 (49%), Gaps = 2/387 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT  TY  L+   TR  R +  L+   ++ + G++ + I+ N ++    E+   DEA+ I
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 168

Query: 87  -FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV-KPNDRTYNILVRA 144
              +  + GC P   +Y+ L+K   + GK  ++  LL++M++   V  PN   YN ++  
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 228

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +  +  + +A ++  +MV  GI PD VTYN++  A  +     +AE  L +M N +V PN
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 288

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   ++ GY   G  ++A+R    M+   + P++V  + L+                 
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M   G  PDV +++ +++ +++ G +    ++FD M+  GI PD + F++L K Y   G
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 408

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              KA  I   MR +GV P+VV + TVI+  C   KM  AM  + +M + G+ P+   Y 
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 468

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGV 411
            L+ G+       +A+EL+  +   G+
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGM 495



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 203/424 (47%), Gaps = 7/424 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L   GK  EA  +F+ +  +G  P + +Y  ++     +     +  L   +  DG+
Sbjct: 331 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 390

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   FN +I A +  G +D+AM IF +M+D G KP   TY T+I     +GK +++++
Sbjct: 391 APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 450

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M  D+ V P+   YN L++ +C+  S+ +A  ++ +++ +G+  D V ++++    
Sbjct: 451 KFNQMI-DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 509

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A+ +     N  + P+     +++ GYC  G ME A+R    M    + PN+
Sbjct: 510 CKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 569

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           VV+ +L+ G+  I     +D+ L+L  E    G+KP  + +S I+D    AG     +  
Sbjct: 570 VVYCTLVNGYCKIGR---IDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVK 626

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F +M ++GI  DI  ++I+ +G  +     +A  +   +R   V  N++   T+I G   
Sbjct: 627 FHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQ 686

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             +++ A  ++  +    + P++ TY  ++    +      AE++   M+  G  P    
Sbjct: 687 TRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRL 746

Query: 418 IQLV 421
           +  V
Sbjct: 747 LNHV 750



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 120/474 (25%), Positives = 218/474 (45%), Gaps = 36/474 (7%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  ++A  +F  +++ G  P L+TY ++V AL + +      + + ++    + P++  
Sbjct: 232 EGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWT 291

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I   S +G   EA+++F++M+     P   T + L+      GK +E+  +   M+
Sbjct: 292 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMA 351

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K   P+  +YNI++  + +K  + +  ++   M+  GI PD  T+N L +AYA  G  
Sbjct: 352 M-KGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGML 410

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A  +  EM+++ V+P+  T   +++  C+ G M+DAM    +M +  V P+   +N L
Sbjct: 411 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 470

Query: 247 IKGF----------------------LDIKDSDGVDKALT-------------LMEEFGV 271
           I+GF                      LDI     +   L              L    G+
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            PD V +S +MD +   G M K   +FD MV AGIEP++ V+  L  GY + G   +  S
Sbjct: 531 HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLS 590

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +   M + G+ P+ ++++ +I G   A +   A   + +M E GI  ++ TY  +L G  
Sbjct: 591 LFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLF 650

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
           + +    A  L + +    V+    T+  + D         EAK +  S    R
Sbjct: 651 KNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSR 704



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 204/423 (48%), Gaps = 9/423 (2%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM--KPDSILFNAMINACSESGN 79
           E G  P + +Y+ L+ +L  Q +      L+  + + G    P+ + +N +I+   + G+
Sbjct: 175 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 234

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V++A  +F++M   G  P   TYN+++         +++   L+ M  +K V PN+ TYN
Sbjct: 235 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV-NKRVLPNNWTYN 293

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+  + S    +EA  V  +M    I PD VT + L  +  +YG+   A  +   M   
Sbjct: 294 NLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK 353

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+  +  I+++GY  +G + D       M    + P+   FN LIK +    +   +
Sbjct: 354 GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY---ANCGML 410

Query: 260 DKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           DKA+ +   M + GVKPDVVT+ T++ A    G M    E F+ M+  G+ PD + ++ L
Sbjct: 411 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 470

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
            +G+   G   KA+ +++ +   G+H ++V F+++I+  C   ++  A +I++    +G+
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
           +P+   Y  L+ GY    +  +A  +   M   G+ P       + + +  IG   E   
Sbjct: 531 HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLS 590

Query: 437 VLK 439
           + +
Sbjct: 591 LFR 593



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 98/435 (22%), Positives = 206/435 (47%), Gaps = 1/435 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F  +      P ++T + L+ +L +  + K    +   +   G  PD   +
Sbjct: 303 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 362

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N M+N  +  G + +   +F  M   G  P   T+N LIK Y N G  ++++ +   M +
Sbjct: 363 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM-R 421

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D  VKP+  TY  ++ A C    +++A     +M+  G+ PD   YN L + +  +G   
Sbjct: 422 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 481

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A++++ E+ NN +  +      I++  CK G + DA         + +HP+ VV++ L+
Sbjct: 482 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLM 541

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G+  +   +   +    M   G++P+VV + T+++ +   G + +   +F +M++ GI+
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIK 601

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P   ++SI+  G  +AG    A+     M + G+  ++  +  V+ G         A+ +
Sbjct: 602 PSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFL 661

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           ++++  + +  N+ T  T++ G  + ++   A++L   +    + P   T  ++  +   
Sbjct: 662 FKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIK 721

Query: 428 IGLAREAKRVLKSAE 442
            GL  EA+ +  S +
Sbjct: 722 EGLVEEAEDMFSSMQ 736



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/369 (21%), Positives = 179/369 (48%), Gaps = 7/369 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  IFN + + G +P ++TY T++AAL R  +    +   +++   G+ PD   +
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I      G++ +A ++  ++ ++G       ++++I     +G+  ++  +  L + 
Sbjct: 468 NCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL-TV 526

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  + P+   Y++L+  +C    +E+A  V   MV++GI+P+ V Y TL   Y + G   
Sbjct: 527 NVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRID 586

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
               +  EM    ++P+     II+ G  + G    A    + M E  +  ++  +N ++
Sbjct: 587 EGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVL 646

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +G      +   D+A+ L +E     VK +++T +T++D       + + +++F  + ++
Sbjct: 647 RGLF---KNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS 703

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
            + P +  +SI+    ++ G  ++AE + +SM+  G  PN  +   V+       ++ RA
Sbjct: 704 RLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 763

Query: 365 MSIYEKMCE 373
            +   K+ E
Sbjct: 764 GAYLSKIDE 772



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 112/241 (46%), Gaps = 3/241 (1%)

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD-GVDK 261
           P   T  I++    +    E A+ F  ++    +  N+++ N L++GF + K +D  +D 
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 168

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG--IEPDIHVFSILAKG 319
            L    E G  PDV ++S ++ +    G  G+  ++   M + G    P++  ++ +  G
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 228

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           + + G+  KA  +   M + G+ P++V + +V+   C A  M +A +   +M    + PN
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 288

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             TY  L++GY    Q   A  + + M    + P   T+ ++  S    G  +EA+ V  
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348

Query: 440 S 440
           +
Sbjct: 349 T 349



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 136/296 (45%), Gaps = 4/296 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  +A  IF+  +  G  P  + Y+ L+       + +  L +   +   G+
Sbjct: 506 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ +++  ++N   + G +DE + +F++M   G KP+T  Y+ +I G    G+   +  
Sbjct: 566 EPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKV 625

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M++   +  +  TYNI++R        +EA  +  ++ A  ++ + +T NT+    
Sbjct: 626 KFHEMTE-SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 684

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q      A+ +   +  +++ P+  T  I+++   KEG +E+A      M+     PN 
Sbjct: 685 FQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNS 744

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            + N +++  L   +       L+ ++E     + +T   ++D +SS    G C+E
Sbjct: 745 RLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSK---GTCRE 797



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 111/256 (43%), Gaps = 36/256 (14%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  +F+ ++  G  P ++ Y TLV    +  R    LSL  ++ + G+KP +IL+
Sbjct: 548 GKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILY 607

Query: 68  NAMINACSESGNV-----------------------------------DEAMKIFQKMKD 92
           + +I+   ++G                                     DEA+ +F++++ 
Sbjct: 608 SIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRA 667

Query: 93  SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIE 152
              K    T NT+I G     + EE+  L   +S+ + V P+  TY+I++     +  +E
Sbjct: 668 MNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLV-PSVVTYSIMITNLIKEGLVE 726

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           EA ++   M  +G +P++   N + R   +  E  RA   L ++          T  ++V
Sbjct: 727 EAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLV 786

Query: 213 SGYCKEGNMEDAMRFL 228
             +  +G   + +RFL
Sbjct: 787 DLFSSKGTCREHIRFL 802



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + P  H ++IL     RA  P+ A +    + + G+  N+++   ++ G+C A +   A+
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166

Query: 366 SI-YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
            I   +  E+G  P++ +Y  LL    +  +  +A++LL++M E G
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGG 212


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 193/387 (49%), Gaps = 2/387 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT  TY  L+   TR  R +  L+   ++ + G++ + I+ N ++    E+   DEA+ I
Sbjct: 122 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 181

Query: 87  -FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV-KPNDRTYNILVRA 144
              +  + GC P   +Y+ L+K   + GK  ++  LL++M++   V  PN   YN ++  
Sbjct: 182 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 241

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +  +  + +A ++  +MV  GI PD VTYN++  A  +     +AE  L +M N +V PN
Sbjct: 242 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 301

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   ++ GY   G  ++A+R    M+   + P++V  + L+                 
Sbjct: 302 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 361

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M   G  PDV +++ +++ +++ G +    ++FD M+  GI PD + F++L K Y   G
Sbjct: 362 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 421

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              KA  I   MR +GV P+VV + TVI+  C   KM  AM  + +M + G+ P+   Y 
Sbjct: 422 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 481

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGV 411
            L+ G+       +A+EL+  +   G+
Sbjct: 482 CLIQGFCTHGSLLKAKELISEIMNNGM 508



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 203/424 (47%), Gaps = 7/424 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L   GK  EA  +F+ +  +G  P + +Y  ++     +     +  L   +  DG+
Sbjct: 344 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 403

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   FN +I A +  G +D+AM IF +M+D G KP   TY T+I     +GK +++++
Sbjct: 404 APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 463

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M  D+ V P+   YN L++ +C+  S+ +A  ++ +++ +G+  D V ++++    
Sbjct: 464 KFNQMI-DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 522

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A+ +     N  + P+     +++ GYC  G ME A+R    M    + PN+
Sbjct: 523 CKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 582

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           VV+ +L+ G+  I     +D+ L+L  E    G+KP  + +S I+D    AG     +  
Sbjct: 583 VVYCTLVNGYCKIGR---IDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMK 639

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F +M ++GI  DI  ++I+ +G  +     +A  +   +R   V  N++   T+I G   
Sbjct: 640 FHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQ 699

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             +++ A  ++  +    + PN+ TY  ++    +      AE++   M+  G  P    
Sbjct: 700 TRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRL 759

Query: 418 IQLV 421
           +  V
Sbjct: 760 LNHV 763



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 221/479 (46%), Gaps = 37/479 (7%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  ++A  +F  +++ G  P L+TY ++V AL + +      + + ++    + P++  
Sbjct: 245 EGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWT 304

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I   S +G   EA+++F++M+     P   T + L+      GK +E+  +   M+
Sbjct: 305 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMA 364

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K   P+  +YNI++  + +K  + +  ++   M+  GI PD  T+N L +AYA  G  
Sbjct: 365 M-KGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGML 423

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A  +  EM+++ V+P+  T   +++  C+ G M+DAM    +M +  V P+   +N L
Sbjct: 424 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 483

Query: 247 IKGF----------------------LDIKDSDGVDKALT-------------LMEEFGV 271
           I+GF                      LDI     +   L              L    G+
Sbjct: 484 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 543

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            PD V +S +MD +   G M K   +FD MV AGIEP++ V+  L  GY + G   +  S
Sbjct: 544 HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLS 603

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +   M + G+ P+ ++++ +I G   A +   A   + +M E GI  ++ TY  +L G  
Sbjct: 604 LFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLF 663

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           + +    A  L + +    V+    T+  + D         EAK +  S    R  +PN
Sbjct: 664 KNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRL-VPN 721



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 204/423 (48%), Gaps = 9/423 (2%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM--KPDSILFNAMINACSESGN 79
           E G  P + +Y+ L+ +L  Q +      L+  + + G    P+ + +N +I+   + G+
Sbjct: 188 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 247

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V++A  +F++M   G  P   TYN+++         +++   L+ M  +K V PN+ TYN
Sbjct: 248 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV-NKRVLPNNWTYN 306

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+  + S    +EA  V  +M    I PD VT + L  +  +YG+   A  +   M   
Sbjct: 307 NLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK 366

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+  +  I+++GY  +G + D       M    + P+   FN LIK +    +   +
Sbjct: 367 GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY---ANCGML 423

Query: 260 DKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           DKA+ +   M + GVKPDVVT+ T++ A    G M    E F+ M+  G+ PD + ++ L
Sbjct: 424 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 483

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
            +G+   G   KA+ +++ +   G+H ++V F+++I+  C   ++  A +I++    +G+
Sbjct: 484 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 543

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
           +P+   Y  L+ GY    +  +A  +   M   G+ P       + + +  IG   E   
Sbjct: 544 HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLS 603

Query: 437 VLK 439
           + +
Sbjct: 604 LFR 606



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 98/435 (22%), Positives = 206/435 (47%), Gaps = 1/435 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F  +      P ++T + L+ +L +  + K    +   +   G  PD   +
Sbjct: 316 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 375

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N M+N  +  G + +   +F  M   G  P   T+N LIK Y N G  ++++ +   M +
Sbjct: 376 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM-R 434

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D  VKP+  TY  ++ A C    +++A     +M+  G+ PD   YN L + +  +G   
Sbjct: 435 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 494

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A++++ E+ NN +  +      I++  CK G + DA         + +HP+ VV++ L+
Sbjct: 495 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLM 554

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G+  +   +   +    M   G++P+VV + T+++ +   G + +   +F +M++ GI+
Sbjct: 555 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIK 614

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P   ++SI+  G  +AG    A+     M + G+  ++  +  V+ G         A+ +
Sbjct: 615 PSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFL 674

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           ++++  + +  N+ T  T++ G  + ++   A++L   +    + P   T  ++  +   
Sbjct: 675 FKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIK 734

Query: 428 IGLAREAKRVLKSAE 442
            GL  EA+ +  S +
Sbjct: 735 EGLVEEAEDMFSSMQ 749



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 81/369 (21%), Positives = 180/369 (48%), Gaps = 7/369 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  IFN + + G +P ++TY T++AAL R  +    +   +++   G+ PD   +
Sbjct: 421 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 480

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I      G++ +A ++  ++ ++G       ++++I     +G+  ++  +  L + 
Sbjct: 481 NCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL-TV 539

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  + P+   Y++L+  +C    +E+A  V   MV++GI+P+ V Y TL   Y + G   
Sbjct: 540 NVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRID 599

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
               +  EM    ++P+     II+ G  + G    A    + M E  +  ++  +N ++
Sbjct: 600 EGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVL 659

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +G      +   D+A+ L +E     VK +++T +T++D       + + +++F  + ++
Sbjct: 660 RGLF---KNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS 716

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
            + P++  +SI+    ++ G  ++AE + +SM+  G  PN  +   V+       ++ RA
Sbjct: 717 RLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 776

Query: 365 MSIYEKMCE 373
            +   K+ E
Sbjct: 777 GAYLSKIDE 785



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 112/241 (46%), Gaps = 3/241 (1%)

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD-GVDK 261
           P   T  I++    +    E A+ F  ++    +  N+++ N L++GF + K +D  +D 
Sbjct: 122 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 181

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG--IEPDIHVFSILAKG 319
            L    E G  PDV ++S ++ +    G  G+  ++   M + G    P++  ++ +  G
Sbjct: 182 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 241

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           + + G+  KA  +   M + G+ P++V + +V+   C A  M +A +   +M    + PN
Sbjct: 242 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 301

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             TY  L++GY    Q   A  + + M    + P   T+ ++  S    G  +EA+ V  
Sbjct: 302 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 361

Query: 440 S 440
           +
Sbjct: 362 T 362



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/296 (21%), Positives = 136/296 (45%), Gaps = 4/296 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  +A  IF+  +  G  P  + Y+ L+       + +  L +   +   G+
Sbjct: 519 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 578

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ +++  ++N   + G +DE + +F++M   G KP+T  Y+ +I G    G+   +  
Sbjct: 579 EPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKM 638

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M++   +  +  TYNI++R        +EA  +  ++ A  ++ + +T NT+    
Sbjct: 639 KFHEMTE-SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 697

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q      A+ +   +  +++ PN  T  I+++   KEG +E+A      M+     PN 
Sbjct: 698 FQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNS 757

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            + N +++  L   +       L+ ++E     + +T   ++D +SS    G C+E
Sbjct: 758 RLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSK---GTCRE 810



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 36/256 (14%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  +F+ ++  G  P ++ Y TLV    +  R    LSL  ++ + G+KP +IL+
Sbjct: 561 GKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILY 620

Query: 68  NAMINACSESGNV-----------------------------------DEAMKIFQKMKD 92
           + +I+   ++G                                     DEA+ +F++++ 
Sbjct: 621 SIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRA 680

Query: 93  SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIE 152
              K    T NT+I G     + EE+  L   +S+ + V PN  TY+I++     +  +E
Sbjct: 681 MNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLV-PNVVTYSIMITNLIKEGLVE 739

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           EA ++   M  +G +P++   N + R   +  E  RA   L ++          T  ++V
Sbjct: 740 EAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLV 799

Query: 213 SGYCKEGNMEDAMRFL 228
             +  +G   + +RFL
Sbjct: 800 DLFSSKGTCREQIRFL 815



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + P  H ++IL     RA  P+ A +    + + G+  N+++   ++ G+C A +   A+
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179

Query: 366 SI-YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
            I   +  E+G  P++ +Y  LL    +  +  +A++LL++M E G
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGG 225


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 211/414 (50%), Gaps = 7/414 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L  KG+  ++ +  + ++ +G +   ++Y TL+  L +    +  + L+  +E    
Sbjct: 209 MKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRST 268

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD +++N +I+   +   V+EA   + +M   G  P   TY+TLI G+   G+   +  
Sbjct: 269 RPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFS 328

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M+  KN+ P+  TY IL+ A C +  ++EA N++  M   G++P+ VTY+TL   Y
Sbjct: 329 LLNEMTL-KNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGY 387

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              GE + A+Q+   M   +V P+  +  I+++G CK  ++++AM  L  M    V PN 
Sbjct: 388 CLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNT 447

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +NSLI G      S  +  AL LM+E    G   DV+T+++++D       + K   +
Sbjct: 448 VTYNSLIDGLCK---SGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIAL 504

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F  M + GI+P+ + ++ L  G  +    + A+ +   +   G   +V  +  +I G C 
Sbjct: 505 FMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCK 564

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
              +  A+++  KM + G  P+  T+E ++    E  +  +AE+LL  M  KG+
Sbjct: 565 EGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 213/442 (48%), Gaps = 3/442 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  P L+T + L+       +     S++ K+ K G +P++I+   ++      G V +
Sbjct: 161 KGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKK 220

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           ++    K+   G +    +Y TL+ G   +G+   ++KLL+ M +D++ +P+   YN ++
Sbjct: 221 SLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLR-MIEDRSTRPDVVMYNTII 279

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
              C    + EA++   +M + GI PD +TY+TL   +   G+   A  +L EM    + 
Sbjct: 280 DGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNIN 339

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+  T  I++   CKEG +++A   L  M +  V PN+V +++L+ G+  + +     + 
Sbjct: 340 PDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQI 399

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              M +  V P V +++ +++       + +   +  +M+   + P+   ++ L  G  +
Sbjct: 400 FHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCK 459

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           +G    A  ++  +   G   +V+ +T+++ G C    + +A++++ KM E GI PN  T
Sbjct: 460 SGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYT 519

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           Y  L+ G  +  +   A++L Q +  KG      T  ++       G+  EA   +KS  
Sbjct: 520 YTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEA-LAMKSKM 578

Query: 443 EDRQSMPNKKD-EIAVESIHRK 463
           ED   +P+    EI + S+  K
Sbjct: 579 EDNGCIPDAVTFEIIIRSLFEK 600



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 173/348 (49%)

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K ++P+  T +IL+  +C    +  +++V+ K++  G QP+ +   TL +     GE  +
Sbjct: 161 KGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKK 220

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           +     ++     + N+ + G +++G CK G    A++ L  +++    P++V++N++I 
Sbjct: 221 SLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIID 280

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G    K  +      T M   G+ PDV+T+ST++  +  AG +     + ++M    I P
Sbjct: 281 GLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINP 340

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D++ ++IL     + G+ ++A+++L  M K GV PNVV ++T++ G+C   ++  A  I+
Sbjct: 341 DVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIF 400

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
             M +  +NP++ +Y  ++ G  + K    A  LL+ M  K V P   T   + D     
Sbjct: 401 HAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKS 460

Query: 429 GLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQI 476
           G    A  ++K      Q          ++ + + QNL  + + F+++
Sbjct: 461 GRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKM 508



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/438 (21%), Positives = 191/438 (43%), Gaps = 32/438 (7%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  P L+T + L+  L    +     S++ K+ K G +P+SI    ++      G    
Sbjct: 5   KGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLM-----KGETRC 59

Query: 83  AMKIFQKMKDSGCKPTTSTYNTL---------------IKGYGNVGKPEESLKLLQLMSQ 127
           A+K+ + ++D   +P     ++L                  Y +   P     +   +SQ
Sbjct: 60  AIKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQ 119

Query: 128 DKNV-----KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
              +      P+   +  ++ +         A ++  +M   GI+PD VT + L   +  
Sbjct: 120 FNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCH 179

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+   +  +L ++     +PN      ++ G C +G ++ ++ F  ++       N V 
Sbjct: 180 LGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVS 239

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           + +L+ G   I ++    K L ++E+   +PDVV ++TI+D      L+ +  + + +M 
Sbjct: 240 YGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMN 299

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             GI PD+  +S L  G+  AG+   A S+L  M    ++P+V  +T +I   C   K++
Sbjct: 300 SRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLK 359

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A ++   M + G+ PN+ TY TL+ GY    +   A+++   M +  V P   +  ++ 
Sbjct: 360 EAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMI 419

Query: 423 DSW-------RAIGLARE 433
           +          A+ L RE
Sbjct: 420 NGLCKGKSVDEAMNLLRE 437



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 87/380 (22%), Positives = 162/380 (42%), Gaps = 20/380 (5%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+ P+ +  + +IN     G +  +  +  K+   G +P + T  TL+KG     +   +
Sbjct: 6   GIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKG-----ETRCA 60

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           +KL + M +D++ +P     + L  +  +           +   +   QP ++ ++ +  
Sbjct: 61  IKLPR-MIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHS---QPPSI-HDVVHD 115

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           A +Q+         +  M+N    P+    G I+    K  +   A+    +M+   + P
Sbjct: 116 AVSQFNG-------MLLMRNT---PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEP 165

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           +LV  + LI  F  +         L  + + G +P+ +  +T+M      G + K     
Sbjct: 166 DLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFH 225

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           D +V  G + +   +  L  G  + GE + A  +L  +      P+VVM+ T+I G C  
Sbjct: 226 DKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKD 285

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
             +  A   Y +M   GI P++ TY TL+ G+  A Q   A  LL  M  K + P   T 
Sbjct: 286 KLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTY 345

Query: 419 QLVADSWRAIGLAREAKRVL 438
            ++ D+    G  +EAK +L
Sbjct: 346 TILIDALCKEGKLKEAKNLL 365


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 205/443 (46%), Gaps = 38/443 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD--GMKPDSI 65
           G+  +    F  L+  G RP    +  +V A          L+++ ++ +      PD+ 
Sbjct: 136 GRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAF 195

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            +N +I     SG   +A+K+F +M D G  P   TYNT+I G+   G  E   +L   M
Sbjct: 196 SYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQM 255

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
             D   KPN  TYN+L+   C    ++E   ++ +M +  + PD  TY+ L     + GE
Sbjct: 256 LHD-GPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGE 314

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
           +     +  E     V     TC I+++G CK+G +  A +    +    + P  V++N+
Sbjct: 315 SQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNT 374

Query: 246 LIKGFLDIKDSDG--------------------------------VDKALTL---MEEFG 270
           LI G+  ++D  G                                V KA  L   ME+ G
Sbjct: 375 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 434

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           V P V TF+T++DA+ +AG + KC  +  DM + GI+ D+  F  + K + + G+  +A 
Sbjct: 435 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAV 494

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           +IL  M    V PN  ++ ++I  +  +   ++A+ + EKM   G++ ++ TY  LL G 
Sbjct: 495 AILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGL 554

Query: 391 GEAKQPWRAEELLQVMEEKGVRP 413
             + Q   AEEL+  +  +G+RP
Sbjct: 555 CRSSQIDEAEELIYTLRNQGLRP 577



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 207/453 (45%), Gaps = 36/453 (7%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  +F+ +++ G  P  ITY T++    +    ++   L  ++  DG KP+ + +
Sbjct: 208 GKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTY 267

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +++    +G +DE   +  +M      P   TY+ L  G    G+ +  L L    S 
Sbjct: 268 NVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFA-ESL 326

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K V     T +IL+   C    + +A  V   +V +G+ P  V YNTL   Y Q  +  
Sbjct: 327 KKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLR 386

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +  +M++  +RP+  T   +++G CK   +  A   +  M++  V P++  FN+LI
Sbjct: 387 GAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 446

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             +      +     L+ M++ G+K DV++F +++ A+   G + +   I DDM+   + 
Sbjct: 447 DAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVA 506

Query: 308 PDIHVFS-----------------------------------ILAKGYVRAGEPQKAESI 332
           P+  V++                                   +L KG  R+ +  +AE +
Sbjct: 507 PNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEEL 566

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           + ++R  G+ P+VV + T+IS  CN     +A+ + ++M + GI P L+T  TL+     
Sbjct: 567 IYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALAS 626

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           A +    E L Q M  K V P  S   ++ D++
Sbjct: 627 AGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAY 659



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 204/411 (49%), Gaps = 7/411 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  E   + + +      P   TY+ L   LTR    +++LSL ++  K G+   
Sbjct: 274 LCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLG 333

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +   + ++N   + G V +A ++F+ +  +G  PTT  YNTLI GY  V     +  + +
Sbjct: 334 AYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFE 393

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + ++++P+  TYN L+   C    + +A ++V +M  SG+ P   T+NTL  AY   
Sbjct: 394 QM-KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTA 452

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+  +   +L +MQ   ++ +  + G +V  +CK G + +A+  L  M   +V PN  V+
Sbjct: 453 GQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVY 512

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           NS+I  +++  D++   +AL L+E+    GV   +VT++ ++     +  + + +E+   
Sbjct: 513 NSIIDAYIESGDTE---QALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYT 569

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +   G+ PD+  ++ +       G+  KA  +L  M KYG+ P +    T++S   +A +
Sbjct: 570 LRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGR 629

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           +     +Y++M    + P+   Y  ++  Y   +   +   L + M EKG+
Sbjct: 630 VHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 180/341 (52%), Gaps = 1/341 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  +A  +F  L+  G  PT + Y TL+    + +  +    +  +++   +
Sbjct: 341 LNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHI 400

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD I +NA+IN   +   V +A  +  +M+ SG  P+  T+NTLI  YG  G+ E+   
Sbjct: 401 RPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFT 460

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M Q K +K +  ++  +V+A+C    I EA  ++  M+   + P+A  YN++  AY
Sbjct: 461 VLSDMQQ-KGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 519

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+T +A  ++ +M+N+ V  +  T  +++ G C+   +++A   +Y ++   + P++
Sbjct: 520 IESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDV 579

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N++I    +  D+D   + L  M ++G++P + T  T++ A +SAG +   + ++  
Sbjct: 580 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQ 639

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           M+   +EP   ++ I+   YVR     K  S+   M + G+
Sbjct: 640 MLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 132/254 (51%), Gaps = 3/254 (1%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           + G  P++ T+ TL+ A     + +   +++S +++ G+K D I F +++ A  ++G + 
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           EA+ I   M      P    YN++I  Y   G  E++L L++ M ++  V  +  TYN+L
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKM-KNSGVSASIVTYNLL 550

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           ++  C  + I+EA  ++Y +   G++PD V+YNT+  A    G+T +A ++L EM    +
Sbjct: 551 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 610

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLY-RMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           RP  RTC  +VS     G + D M  LY +M    V P+  ++  ++  ++  ++   V 
Sbjct: 611 RPTLRTCHTLVSALASAGRVHD-MECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVA 669

Query: 261 KALTLMEEFGVKPD 274
                M E G+  D
Sbjct: 670 SLKKEMSEKGIAFD 683


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/446 (24%), Positives = 221/446 (49%), Gaps = 36/446 (8%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P   TY  ++  L ++ R      L+ ++   G+ P+ ++++ +I+     GN DEA
Sbjct: 308 GLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEA 367

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            KI ++M  +G +P   TY+ LI+G   +G+   + ++L+ M++      +  TYN+++ 
Sbjct: 368 FKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTK-IGYMADTMTYNLVIE 426

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
               +++ EEA+ ++ +M   GI P+  TY+ +     Q GE+ RA  +L +M  + ++P
Sbjct: 427 GHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKP 486

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N      ++SGYC+EG+   A   L +M    + P+L  +NSLI G  ++   D   +  
Sbjct: 487 NAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYY 546

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR- 322
             M E G +P+  T+  ++  +S AG + K +++   M+ +G+ P+  +++ + +GY + 
Sbjct: 547 DEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKS 606

Query: 323 ----------------------------------AGEPQKAESILTSMRKYGVHPNVVMF 348
                                             +G  Q A S+L+ + K G+ P+ +++
Sbjct: 607 DNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIY 666

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
            ++ISG+C A  M++A+ + ++M + GI P +  Y  L+ G+ ++     A  +   +  
Sbjct: 667 GSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIIC 726

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREA 434
           KG+ P   T   + D +   G  R+A
Sbjct: 727 KGLPPNCVTYTTLIDGYCKAGDIRDA 752



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 206/414 (49%), Gaps = 12/414 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+   A  +   +I +G +P    Y  L++   R+  F      + K+ ++ +
Sbjct: 460 INGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENL 519

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +N++I   S  G +DEA++ + +M + G +P   TY  LI GY   G  E++ +
Sbjct: 520 TPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQ 579

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M  +  + PND  Y  ++  +   +++E+  + +  M+  G+ PD   Y  +    
Sbjct: 580 LLHQM-LNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNL 638

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           +  G    A  +L  ++ N + P+    G ++SG+CK  +ME A+  L  M +  + P +
Sbjct: 639 SSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGI 698

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             +N+LI GF     SD +  A  +       G+ P+ VT++T++D +  AG +    ++
Sbjct: 699 SCYNALIDGFCK---SDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDL 755

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM--RKYGVHPNVVMFTTVISGW 355
           +++M+  G+ PD  V+S+LA G   +G+ Q+A  I   M  R Y +   +  F T++ G+
Sbjct: 756 YNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAI---ISSFNTLVHGF 812

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
           C   K+Q  +     M +  I P+L T E ++ G GEA +   A  +   +++K
Sbjct: 813 CKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQK 866



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 197/416 (47%), Gaps = 1/416 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   EA  I   +   G +P  ITY  L+  L +  R      ++ ++ K G   D++ 
Sbjct: 361 QGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMT 420

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I       N +EA  +  +M+  G  P   TY+ +I G   +G+ E +  LL+ M 
Sbjct: 421 YNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMI 480

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            D  +KPN   Y  L+  +C + S   A   + KM    + PD   YN+L    +  G+ 
Sbjct: 481 AD-GLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKM 539

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A +   EM     +PN+ T G ++ GY   GN+E A + L++M    ++PN  ++  +
Sbjct: 540 DEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQI 599

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           ++G+    + + V   L  M E G+ PD   +  ++   SS+G M     +   + K G+
Sbjct: 600 LEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGL 659

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD  ++  L  G+ +A + +KA  +L  M K G+ P +  +  +I G+C +  +  A +
Sbjct: 660 VPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARN 719

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
           I+  +   G+ PN  TY TL+ GY +A     A +L   M  +GV P      ++A
Sbjct: 720 IFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLA 775



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 204/421 (48%), Gaps = 1/421 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P + TY+TL+ A  + +  +S   ++ ++ + G   + + +N +I     +G ++EA
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEA 297

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
               ++M+D G  P   TY  +I G    G+P+++  LL  MS    + PN   Y+ L+ 
Sbjct: 298 FGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSC-AGLMPNVVVYSTLID 356

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +  + + +EA+ +V +M A+G+QP+ +TY+ L R   + G   RA ++L +M       
Sbjct: 357 GFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMA 416

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T  +++ G+ ++ N E+A   L  M++  + PN+  ++ +I G   I +S+     L
Sbjct: 417 DTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLL 476

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M   G+KP+   ++ ++  +   G      E    M +  + PD++ ++ L  G    
Sbjct: 477 EQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNV 536

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+  +A      M + G  PN   +  +I G+  A  +++A  +  +M   G+NPN   Y
Sbjct: 537 GKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIY 596

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             +L GY ++    +    L+ M EKG+ P      +V  +  + G  + A  VL   E+
Sbjct: 597 AQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEK 656

Query: 444 D 444
           +
Sbjct: 657 N 657



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 202/419 (48%), Gaps = 1/419 (0%)

Query: 55  VEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK 114
           +E  G+ PD   ++ +I A  +  +++ A K+ ++M+++GC     TYNTLI G    G 
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293

Query: 115 PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYN 174
            EE+    + M +D  + P+  TY  ++   C +   ++A  ++ +M  +G+ P+ V Y+
Sbjct: 294 IEEAFGYKKEM-EDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYS 352

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           TL   + + G    A +++ EM    V+PN+ T   ++ G CK G M  A R L +M ++
Sbjct: 353 TLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKI 412

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
               + + +N +I+G L   + +     L  M + G+ P+V T+S I++     G   + 
Sbjct: 413 GYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERA 472

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
             + + M+  G++P+  V++ L  GY R G    A   L  M +  + P++  + ++I G
Sbjct: 473 SGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIG 532

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
             N  KM  A+  Y++M E G  PN  TY  L+ GY  A    +AE+LL  M   G+ P 
Sbjct: 533 LSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPN 592

Query: 415 KSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF 473
                 + + +       +    LKS  E      N+   I + ++    ++ A+ S  
Sbjct: 593 DFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVL 651



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 174/355 (49%), Gaps = 3/355 (0%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G +P  ++ + +++   ++G V +  ++   MKD G  P+    N L+K        +  
Sbjct: 170 GRRP--VVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLL 227

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
            K+   M +   + P+  TY+ L+ A+C    +E A  VV +M  +G   + VTYNTL  
Sbjct: 228 WKVRGFM-EGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIG 286

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
              + G    A     EM++  + P+  T G I++G CK G  + A   L  M    + P
Sbjct: 287 GLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMP 346

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           N+VV+++LI GF+   ++D   K +  M   GV+P+ +T+  ++      G MG+   I 
Sbjct: 347 NVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRIL 406

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
             M K G   D   ++++ +G++R    ++A  +L  MRK G+ PNV  ++ +I+G C  
Sbjct: 407 KQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQI 466

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            + +RA  + E+M   G+ PN   Y  L+ GY        A E L+ M  + + P
Sbjct: 467 GESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTP 521



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 130/285 (45%), Gaps = 3/285 (1%)

Query: 156 NVVYKMVASGIQPDA-VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
           ++   + A+G+ P A    + + RAY        +        +   RP      ++V  
Sbjct: 125 HLAVSLCAAGLYPQANGLLDQMIRAYPTPPLVLSSVHRALSGSDQGRRP--VVLDVLVDT 182

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           Y K G + D    +  MK+L + P+L   N L+K  L     D + K    ME  G+ PD
Sbjct: 183 YKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPD 242

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           V T+ST+++A+     +   +++ ++M + G   ++  ++ L  G  RAG  ++A     
Sbjct: 243 VYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKK 302

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            M  YG+ P+   +  +I+G C   +  +A  + ++M   G+ PN+  Y TL+ G+    
Sbjct: 303 EMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQG 362

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
               A ++++ M   GV+P K T   +      +G    A R+LK
Sbjct: 363 NADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILK 407



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 118/251 (47%)

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           V  + L   Y + G      +++  M++  + P+ R C  ++    +   ++   +    
Sbjct: 174 VVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGF 233

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
           M+   + P++  +++LI+ +  ++D +   K +  M E G   +VVT++T++     AG 
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           + +      +M   G+ PD   +  +  G  + G P +A+ +L  M   G+ PNVV+++T
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I G+        A  I ++M   G+ PN  TY+ L+ G  +  +  RA  +L+ M + G
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIG 413

Query: 411 VRPKKSTIQLV 421
                 T  LV
Sbjct: 414 YMADTMTYNLV 424



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/325 (20%), Positives = 133/325 (40%), Gaps = 64/325 (19%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G    A  + + + + G  P  + Y +L++   +    +  + L+ ++ K G++P 
Sbjct: 638 LSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPG 697

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +NA+I+   +S ++  A  IF  +   G  P   TY TLI GY              
Sbjct: 698 ISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGY-------------- 743

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
                                 C    I +A ++  +M+  G+ PDA  Y+ LA   +  
Sbjct: 744 ----------------------CKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNS 781

Query: 184 GETYRAEQMLFEMQNNQVRPNE--RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           G+    +Q LF  +    R      +   +V G+CK G +++ ++FL+ M + ++ P+L+
Sbjct: 782 GDL---QQALFITEEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLL 838

Query: 242 VFNSLIKG-------------FLDI-------KDSDGVDKALTLMEEFGVKP-DVVTFST 280
              +++ G             F+++       +D+D +    T M   G+ P DV+    
Sbjct: 839 TVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVI--HN 896

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAG 305
           ++ +    G + K   + D +V  G
Sbjct: 897 MIQSHCKQGYLDKALMLHDALVAKG 921


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/485 (25%), Positives = 229/485 (47%), Gaps = 37/485 (7%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + IL  K    +A  ++  + E G +PT++TY TL+ +  +  + +  L L+S++++ G 
Sbjct: 206 LRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGC 265

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +N +IN  S+ G  ++A  +  +M  +G K +  TYN LI GY N G   E+L 
Sbjct: 266 APNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALS 325

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M   K   P   TYN  +   C    + +A   +  M+A+ + PD V+YNTL   Y
Sbjct: 326 LQEEMVL-KGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGY 384

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G   +A  +  E+++  + P   T   ++ G C++G +E A +    M    + P++
Sbjct: 385 CRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDI 444

Query: 241 VVFNSLIKG------------FLDIKDSDGVD--------------------KALTLMEE 268
           V +  L+ G            F D    +G++                    +A +L EE
Sbjct: 445 VTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEE 504

Query: 269 F---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
               G  PD++ ++ ++D     G + +  E+   MV  G+ PD   ++ +   ++  G 
Sbjct: 505 MLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGR 564

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            +K   I   M   G+ P+VV +T +I G     +++RA   + +M E GI PN+ TY +
Sbjct: 565 LRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNS 624

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
           L+ G  + ++  +A      M EKG+ P K +  ++ +    +G  +EA  + K    DR
Sbjct: 625 LINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQM-LDR 683

Query: 446 QSMPN 450
              P+
Sbjct: 684 GVQPD 688



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 191/407 (46%), Gaps = 7/407 (1%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           L+   +++   +  LS+  K+ K  + PD    N ++    +   + +A+++++ M + G
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 229

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
            KPT  TYNTL+  Y   GK ++ L LL  M Q +   PND TYN+L+     K   E+A
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEM-QRRGCAPNDVTYNVLINGLSKKGEFEQA 288

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
             ++ +M+ +G++  A TYN L   Y   G    A  +  EM      P   T    + G
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYG 348

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG---V 271
            CK G M DAM+ L  M    + P++V +N+LI G+  + +   + KA  L +E     +
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGN---LMKAFLLFDELRSIYL 405

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            P +VT++T++D     G +   Q++  +M+  GI PDI  ++IL  G  + G    A+ 
Sbjct: 406 FPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQE 465

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
               M   G+  +   + T I G        RA S+ E+M   G  P+L  Y  ++ G  
Sbjct: 466 FFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLC 525

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           +      A ELLQ M   GV P   T   +  +    G  R+ + + 
Sbjct: 526 KLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIF 572



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 185/386 (47%), Gaps = 1/386 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG   EA  +   ++ +G  PT+ TY + +  L +  R    +  +S +  + + PD + 
Sbjct: 317 KGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVS 376

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I      GN+ +A  +F +++     PT  TYNTL+ G    G+ E + +L ++  
Sbjct: 377 YNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQL-KVEM 435

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            ++ + P+  TY ILV   C   S+  A     +M+  G++ D+  Y T      + G+T
Sbjct: 436 INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDT 495

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            RA  +  EM      P+     ++V G CK GN+E+A   L +M    V P+ V + S+
Sbjct: 496 SRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSI 555

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I   L+        +    M   G+ P VVT++ ++   +  G + +    F +M + GI
Sbjct: 556 IHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGI 615

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P++  ++ L  G  +     +A +    M + G+ PN   +T +I+  CN    Q A+S
Sbjct: 616 LPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALS 675

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGE 392
           +Y++M + G+ P+  T+  LL   G+
Sbjct: 676 LYKQMLDRGVQPDSCTHSALLKQLGK 701



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 65/294 (22%), Positives = 134/294 (45%)

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           +  ++L+  +  K+ +E+  +V  KM+ S + PD    N + R         +A ++   
Sbjct: 165 KILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRT 224

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M    ++P   T   ++  YCK G ++  +  L  M+     PN V +N LI G     +
Sbjct: 225 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 284

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            +     +  M + G+K    T++ ++  + + G++ +   + ++MV  G  P +  ++ 
Sbjct: 285 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNS 344

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
              G  + G    A   L+ M    + P+VV + T+I G+C    + +A  +++++  I 
Sbjct: 345 FIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY 404

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           + P + TY TLL G     +   A++L   M  +G+ P   T  ++ +    +G
Sbjct: 405 LFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMG 458



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 65/123 (52%)

Query: 6   GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
           GKG+   A   F+ + E+G  P +ITY +L+  L + +R     +  +++ + G+ P+  
Sbjct: 596 GKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKY 655

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            +  +IN     GN  EA+ ++++M D G +P + T++ L+K  G   K +   +L  L+
Sbjct: 656 SYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLESLL 715

Query: 126 SQD 128
             +
Sbjct: 716 DSE 718


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 196/406 (48%), Gaps = 1/406 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  E  ++   + E+G  P L+TY+ ++A L R       L L   +   G+ PD+ ++
Sbjct: 246 GKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIY 305

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+         E   +  +M   G KP    Y  LI G+        + ++ + M  
Sbjct: 306 ATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFA 365

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K +K N  TY  L+   C    +E+A ++  +M   GI+PD  TYN L   Y +     
Sbjct: 366 RK-IKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNME 424

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A ++L E++   +  N   CG IV+G C  G++  A      M    + PN+V++ +++
Sbjct: 425 KAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIV 484

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           KG +     +   K L +M++ G+ PDV  ++T++  +  AG M + +    +M+  G++
Sbjct: 485 KGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLK 544

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P+++ +     GY RAGE Q AE     M   G+ PN V+ T +I G+C      +A + 
Sbjct: 545 PNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAK 604

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           +  M + G+ P+++T+  L+ G  +  +   A  +   + +KG+ P
Sbjct: 605 FRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVP 650



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 205/434 (47%), Gaps = 4/434 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G    A+ +F  +I  G +P ++ YTT+V  L ++ RF+  + ++  ++  G+
Sbjct: 449 VNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGL 508

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +N +I    ++G ++E      +M   G KP   TY   I GY   G+ + + +
Sbjct: 509 SPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAER 568

Query: 121 -LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
             ++++  D  + PND     L+  +C   +  +A+     M+  G+ PD  T++ L   
Sbjct: 569 SFIEML--DSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHG 626

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
            ++ G+   A  +  E+ +  + P+  T   ++S  CKEG+++ A      M +  ++PN
Sbjct: 627 LSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPN 686

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +V +N+LI G   + +     +    + E G+  + VT+STI+  +  +  + +  ++F 
Sbjct: 687 IVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFH 746

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            M   G+ PD  V+  L  G  +AG  +KA S+   M + G+  +   F  +I G+    
Sbjct: 747 GMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLG 805

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           K+  A  + E M +  I PN  TY  L+  +        AE+L   M+++ V P   T  
Sbjct: 806 KLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYT 865

Query: 420 LVADSWRAIGLARE 433
            +   +  IG   E
Sbjct: 866 SLLHGYNRIGRRSE 879



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 113/461 (24%), Positives = 203/461 (44%), Gaps = 35/461 (7%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +P  + YT L+    +Q        +  ++    +K ++  + A+I+   + G++++A
Sbjct: 332 GLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKA 391

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK-------------- 129
             +F +M   G KP   TYN LI+GY  V   E++ +LL  + ++               
Sbjct: 392 EDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNG 451

Query: 130 --------------------NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
                                +KPN   Y  +V+    +   EEA  ++  M   G+ PD
Sbjct: 452 LCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPD 511

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
              YNT+   + + G+    +  L EM    ++PN  T G  + GYC+ G M+ A R   
Sbjct: 512 VFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFI 571

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            M +  + PN V+   LI G+    ++         M + GV PDV T S ++   S  G
Sbjct: 572 EMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNG 631

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
            + +   +F +++  G+ PD+  ++ L     + G+ + A  +   M K G++PN+V + 
Sbjct: 632 KLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYN 691

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
            +I+G C   ++ +A  +++ + E G+  N  TY T++ GY ++     A +L   M+  
Sbjct: 692 ALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLV 751

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRV-LKSAEEDRQSMP 449
           GV P       + D     G   +A  + L   EE   S P
Sbjct: 752 GVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTP 792



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 201/424 (47%), Gaps = 2/424 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P + TYT L+ A  R  + +    ++  +E+ G  P+ + ++ +I     +G+VDEA+++
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALEL 289

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            + M + G  P    Y TLI G+    +  E   +L  M     +KP+   Y  L+  + 
Sbjct: 290 KRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYT-MGLKPDHVAYTALINGFV 348

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            ++ I  A+ V  +M A  I+ +  TY  L     + G+  +AE +  EM    ++P+ +
Sbjct: 349 KQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQ 408

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   ++ GY K  NME A   L  +K+  +  N  +  +++ G     D    ++    M
Sbjct: 409 TYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEM 468

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
             +G+KP++V ++TI+      G   +  +I   M   G+ PD+  ++ +  G+ +AG+ 
Sbjct: 469 ISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKM 528

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           ++ +S L  M   G+ PNV  +   I G+C A +MQ A   + +M + GI PN      L
Sbjct: 529 EEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDL 588

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
           + GY +     +A    + M ++GV P   T  ++       G  +EA  V  S   D+ 
Sbjct: 589 IDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVF-SELLDKG 647

Query: 447 SMPN 450
            +P+
Sbjct: 648 LVPD 651



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/464 (23%), Positives = 213/464 (45%), Gaps = 47/464 (10%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            GK  EA  +F+ L+++G  P + TYT+L++ L ++   K+   L   + K G+ P+ + +
Sbjct: 631  GKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTY 690

Query: 68   NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            NA+IN   + G + +A ++F  + + G    + TY+T+I GY       E+ +L   M +
Sbjct: 691  NALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGM-K 749

Query: 128  DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
               V P+   Y  L+   C   + E+A ++   MV  GI      +N L   + + G+  
Sbjct: 750  LVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTP-AFNALIDGFFKLGKLI 808

Query: 188  RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
             A Q++ +M +N + PN  T  I++  +C  GN+++A +    M++  V PN        
Sbjct: 809  EAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPN-------- 860

Query: 248  KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
                                       V+T+++++  ++  G   +   +FD+MV  GI+
Sbjct: 861  ---------------------------VLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIK 893

Query: 308  PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
            PD   +S++   +++ G   KA  ++  M   GV+    ++T +I   C    +   + +
Sbjct: 894  PDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKV 953

Query: 368  YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
             +++ + G   +L T  TL+  +  A    R +E L+V+E       +S + L+  S R 
Sbjct: 954  LDEVEKQGSKLSLATCGTLVCCFHRAG---RTDEALRVLESM----VRSFLNLLEFSVRN 1006

Query: 428  IGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNS 471
                +    +L    E R+S+     +I    +   + LS+S S
Sbjct: 1007 GNRGKSNGEMLSIILEGRKSLSG---DIQTLDVDLFKELSSSTS 1047



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/372 (23%), Positives = 173/372 (46%), Gaps = 2/372 (0%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F  +I+   + G ++EA+ +F   K +      +  N+L K      + E   K+ + M 
Sbjct: 166 FEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGML 225

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
               + P+  TY  L+ A+C    +EE  +V++ M   G  P+ VTY+ +     + G+ 
Sbjct: 226 GA--IVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDV 283

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++   M N  + P+      ++ G+C++    +    L  M  + + P+ V + +L
Sbjct: 284 DEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTAL 343

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I GF+   D  G  +    M    +K +  T+  ++      G + K +++F +M   GI
Sbjct: 344 INGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGI 403

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           +PDI  ++ L +GY +    +KA  +L  ++K  +  N  M   +++G C+   + RA  
Sbjct: 404 KPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANE 463

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           ++++M   G+ PN+  Y T++ G  +  +   A ++L VM+++G+ P       V   + 
Sbjct: 464 LFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFC 523

Query: 427 AIGLAREAKRVL 438
             G   E K  L
Sbjct: 524 KAGKMEEGKSYL 535


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 217/450 (48%), Gaps = 23/450 (5%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  P ++TYT++V  L R  +      ++ +++  G++PD   F+A+I     +  VDE
Sbjct: 107 DGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDE 166

Query: 83  AMKIFQK-MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           A+K++++ +  S  KP   TY  LI G+   G  E+++K+L +M   K V PN  TY+ L
Sbjct: 167 ALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCV-PNVVTYSSL 225

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +   C    +++A ++  +M + G  P+ VTY TL        +   A  ++ EM     
Sbjct: 226 LHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCC 285

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            P+  +   ++ GYC+ G +E+A +    M      P+ + +  L++GF    ++  +++
Sbjct: 286 PPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFC---NASRLEE 342

Query: 262 ALTLMEEF----GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
           A  L+E      G+ PDVVT+S ++  +S A    +  E   +M+   + P+   +S L 
Sbjct: 343 ARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLI 402

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            G  +AG    A  +L +M    V P+V  F +VI   C    M  A  +   M   G+ 
Sbjct: 403 DGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLE 462

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVME--------EKGVRPKKSTIQLVADSWRAIG 429
           P + TY TLL G+    +   A EL +VM            + P+++   L+    R + 
Sbjct: 463 PGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALI----RGLC 518

Query: 430 LAREAKRVLKSAEE--DRQSMPNKKDEIAV 457
            ARE  + +   EE   R+  P ++D +A+
Sbjct: 519 KAREIDKAMAVVEELRSRECEPAEEDCLAI 548



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 217/439 (49%), Gaps = 11/439 (2%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +PT++T+T ++    +  + K  L+   K+ ++ + P+   +N ++N   ++    +A +
Sbjct: 4   QPTVVTWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 86  IFQKMKDS-GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
           + ++M+D     P   TY+T+I G+   G+ + + ++L+ M     + P+  TY  +V  
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE-MQNNQVRP 203
            C    ++ A  +V +M   G++PD  T++ L   +    +   A ++  E + ++  +P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   ++ G+CK GN+E AM+ L  M+  +  PN+V ++SL+ G     D D      
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M   G  P+VVT++T++    +A  +   + + D+M      PD   ++ L  GY R 
Sbjct: 243 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRL 302

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM-CEIGINPNLKT 382
           G  ++A+ +   M      P+ + +T ++ G+CNA +++ A  + E M    GI+P++ T
Sbjct: 303 GRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVT 362

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           Y  ++ GY  AK+   A E +Q M  + V P   T   + D     G    A  VLK   
Sbjct: 363 YSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLK--- 419

Query: 443 EDRQSMPNKKDEIAVESIH 461
               +M NK+ E +V + +
Sbjct: 420 ----NMVNKRVEPSVGTFN 434



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 186/395 (47%), Gaps = 46/395 (11%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P ++TYT L+    +    +  + ++  +E     P+ + ++++++   ++G++D+A+ 
Sbjct: 181 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 240

Query: 86  IFQKMKDSG-----------------------------------CKPTTSTYNTLIKGYG 110
           +F++M   G                                   C P T +YN L+ GY 
Sbjct: 241 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYC 300

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM-VASGIQPD 169
            +G+ EE+ +L + M+  K+  P+  TY  LVR +C+ + +EEA  ++  M  A+GI PD
Sbjct: 301 RLGRIEEAKQLFKEMAT-KSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 359

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
            VTY+ +   Y++      A + + EM    V PN  T   ++ G CK G ++ AM  L 
Sbjct: 360 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLK 419

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            M    V P++  FNS+I     + D D   K L  M   G++P +VT++T+++ +S  G
Sbjct: 420 NMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTG 479

Query: 290 LMGKCQEIFDDM--------VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
            M    E+F+ M          A + P+   FS L +G  +A E  KA +++  +R    
Sbjct: 480 RMEIAYELFEVMRKKAKKSSSAANLVPE-QAFSALIRGLCKAREIDKAMAVVEELRSREC 538

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
            P       ++ G   A + + A  +   + ++G+
Sbjct: 539 EPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 166/349 (47%), Gaps = 15/349 (4%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   +A  +F  +  +G  P ++TYTTL+  L    +  +   L+ ++      PD
Sbjct: 229 LCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPD 288

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ +NA+++     G ++EA ++F++M    C P   TY  L++G+ N  + EE+  LL+
Sbjct: 289 TVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLE 348

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M     + P+  TY+I+V  +       EA   + +M+A  + P+AVTY++L     + 
Sbjct: 349 NMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKA 408

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A ++L  M N +V P+  T   ++   C+ G+M++A + L  M    + P +V +
Sbjct: 409 GRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTY 468

Query: 244 NSLIKGFLDIKDSDGVDKALTLME-----------EFGVKPDVVTFSTIMDAWSSAGLMG 292
            +L++GF     +  ++ A  L E              + P+   FS ++     A  + 
Sbjct: 469 TTLLEGF---SRTGRMEIAYELFEVMRKKAKKSSSAANLVPE-QAFSALIRGLCKAREID 524

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           K   + +++     EP       +  G +RAG  ++A  ++ S+ K G+
Sbjct: 525 KAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 117/221 (52%), Gaps = 4/221 (1%)

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           + +P   T  II+ G+CK   ++ A+    +M+E  V PN   +N ++ G    + +   
Sbjct: 2   ECQPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKA 60

Query: 260 DKALTLMEEF-GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV-KAGIEPDIHVFSILA 317
            + L  M +   V PD+VT+ST+++ +   G M +  EI  +MV + GI PD+  ++ + 
Sbjct: 61  YEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVV 120

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY-EKMCEIGI 376
            G  R G+  +A  ++  M+  GV P+   F+ +I+GWCNA K+  A+ +Y E +     
Sbjct: 121 DGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSW 180

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            P++ TY  L+ G+ ++    +A ++L VME +   P   T
Sbjct: 181 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVT 221


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 211/415 (50%), Gaps = 1/415 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  ++A  +FN +++ G  P L TY  +V AL + +      +++ ++   G+ PD+  
Sbjct: 229 EGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWT 288

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N++I   S +G   EA+++ +KM   G  P   T N+L+      GK +++  +   M+
Sbjct: 289 YNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMA 348

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K  K +  +Y I++  + +K  + +   +   M++ GI PD+  +N L +AYA+ G  
Sbjct: 349 M-KGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGML 407

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            RA  +  EM+   V P+  T   +++  C+ G M+DA+    +M +  V P++  ++ L
Sbjct: 408 DRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFL 467

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I+GF    D       +  M   G++PD+  F+ I++     G +   Q IFD  +  G+
Sbjct: 468 IQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGL 527

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P++ V++ L  GY   G+ + A  +   M   G+ PNVV++ T+++G+C   ++   +S
Sbjct: 528 HPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLS 587

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           ++ ++   GI P+   Y  +L G  +A +   A+     M E G+   + T  +V
Sbjct: 588 LFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIV 642



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 200/418 (47%), Gaps = 3/418 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM--KPDSILFNAMINACSESGNVD 81
           G  P + +Y  ++ +L   ++      L+  + + G    P+++ +N +I+   + G+V+
Sbjct: 174 GCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVN 233

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +A  +F +M   G  P  STYN ++         +++  +L+ M  DK V P++ TYN L
Sbjct: 234 KACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMV-DKGVLPDNWTYNSL 292

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +  + S    +EA  V  KM + GI PD VT N+L  +  ++G+   A  +   M     
Sbjct: 293 IYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQ 352

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           + +  +  I+++GY  +G + D       M    + P+  +FN LIK +      D    
Sbjct: 353 KTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATI 412

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
               M E GV+PDVVT+ST++ A    G M    E F+ M+  G+ P I  +  L +G+ 
Sbjct: 413 IFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFC 472

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
             G+  KA+ ++  M   G+ P++  F  +I+  C   ++  A +I++    IG++PN+ 
Sbjct: 473 THGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVM 532

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            Y TL+ GY    +   A  +  VM   G++P       + + +  +G   E   + +
Sbjct: 533 VYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFR 590



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/445 (21%), Positives = 212/445 (47%), Gaps = 1/445 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +   +  +G  P ++T  +L+A+L +  + K    +   +   G K D   +
Sbjct: 300 GQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSY 359

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             M+N  +  G + +  ++F  M   G  P +  +N LIK Y   G  + +  +   M +
Sbjct: 360 KIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEM-R 418

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           ++ V+P+  TY+ ++ A C    +++A     +M+  G+ P   TY+ L + +  +G+  
Sbjct: 419 EQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLL 478

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A+ ++ +M N  +RP+      I++  CK G + DA         + +HPN++V+N+L+
Sbjct: 479 KAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLM 538

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G+  +   +   +   +M   G++P+VV + T+++ +   G + +   +F +++  GI+
Sbjct: 539 DGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIK 598

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P   +++I+  G  +AG    A+     M + G+  +   ++ V+ G         A+ +
Sbjct: 599 PSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILL 658

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           ++++  + +  ++ T   ++ G  + ++   A++L   +   G+ P   T  ++  +   
Sbjct: 659 FKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIK 718

Query: 428 IGLAREAKRVLKSAEEDRQSMPNKK 452
            GL  EA  +  S E      PN +
Sbjct: 719 EGLVEEADDMFSSMENAGCEQPNSQ 743



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/439 (23%), Positives = 208/439 (47%), Gaps = 9/439 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L   GK  +A  +F+ +  +G +  + +Y  ++     +     +  L + +  DG+
Sbjct: 328 MASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGI 387

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PDS +FN +I A ++ G +D A  IF +M++ G +P   TY+T+I     +GK +++++
Sbjct: 388 APDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVE 447

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M  D+ V P+  TY+ L++ +C+   + +A ++V +M+  G++PD   +N +    
Sbjct: 448 KFNQMI-DQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNL 506

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A+ +     +  + PN      ++ GYC  G ME+A+R    M    + PN+
Sbjct: 507 CKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNV 566

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           VV+ +L+ G+  +     +D+ L+L  E    G+KP    ++ I+     AG     +  
Sbjct: 567 VVYGTLVNGYCKVGR---IDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVK 623

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F +M ++GI  D + +SI+  G  +     +A  +   +    V  ++     +I+G   
Sbjct: 624 FHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQ 683

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             +++ A  ++  +   G+ P++ TY  ++    +      A+++   ME  G     S 
Sbjct: 684 IRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNS- 742

Query: 418 IQLVADSWRAIGLAREAKR 436
            QL+    R +   RE  R
Sbjct: 743 -QLLNHVVRELLEKREIVR 760



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/416 (20%), Positives = 164/416 (39%), Gaps = 76/416 (18%)

Query: 97  PTTSTYNTLIKGYGNVGKPEESLKLL-QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
           PT  TY  L+       +P+ +L    Q++     +  +    + L+R  C      EA 
Sbjct: 106 PTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGI--DTIMISNLLRGLCEAKRTAEAL 163

Query: 156 NVV-YKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV--RPNERTCGIIV 212
           +++ ++M   G  PD  +Y  + ++     ++ +A+++L  M        PN      ++
Sbjct: 164 DILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVI 223

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV- 271
            G+ KEG++  A      M +  + P+L  +N ++      +  D  +  L  M + GV 
Sbjct: 224 DGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVL 283

Query: 272 ----------------------------------KPDVVTFSTIMDAWSSAGLMGKCQEI 297
                                              PDVVT +++M +    G +   +++
Sbjct: 284 PDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDV 343

Query: 298 FDDMVKAGIEPDIHVFSILAKG-----------------------------------YVR 322
           FD M   G + DI  + I+  G                                   Y +
Sbjct: 344 FDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAK 403

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G   +A  I   MR+ GV P+VV ++TVI+  C   KM  A+  + +M + G+ P++ T
Sbjct: 404 CGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSIST 463

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           Y  L+ G+       +A++L+  M  KG+RP       + ++   +G   +A+ + 
Sbjct: 464 YHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIF 519



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 121/258 (46%), Gaps = 8/258 (3%)

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK-DSDGV 259
           + P   T GI++    +    +  + F  ++ +  +  + ++ ++L++G  + K  ++ +
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEAL 163

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG--IEPDIHVFSILA 317
           D  L  M   G  PDV ++  ++ +  S    G+  E+   M + G    P+   ++ + 
Sbjct: 164 DILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVI 223

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            G+ + G+  KA  +   M + G+ P++  +  V++  C A  M +A +I  +M + G+ 
Sbjct: 224 DGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVL 283

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           P+  TY +L++GY    Q   A  + + M  +G+ P   T+  +  S    G  ++A+ V
Sbjct: 284 PDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDV 343

Query: 438 LKSAEEDRQSMPNKKDEI 455
                 D  +M  +K +I
Sbjct: 344 F-----DSMAMKGQKTDI 356



 Score = 45.8 bits (107), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 69/181 (38%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+   A   F+ + E G      TY+ ++  L +       + L  ++    +K D
Sbjct: 611 LFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKID 670

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
               N MI    +   V+EA  +F  +  SG  P+  TY+ ++      G  EE+  +  
Sbjct: 671 ITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFS 730

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M      +PN +  N +VR    K  I  A   + K+       D  T   L   ++  
Sbjct: 731 SMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLIDLFSSK 790

Query: 184 G 184
           G
Sbjct: 791 G 791


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 215/438 (49%), Gaps = 4/438 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A   F  +++ G  P   +Y  L+  L      +  L L + +EK G++PD + +
Sbjct: 199 GLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTY 258

Query: 68  NAMINACSESGNVDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ-LM 125
             +       G +  A +I QKM  D G KP   TY  LI G+  +G  EE+L+L + L+
Sbjct: 259 KIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLL 318

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           S     + N   Y++L+ + C +  ++EA  ++Y+M A+ +QPD VTY+ L     + G+
Sbjct: 319 S--SGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGK 376

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
             +A Q+  EM  N++ PN      I+ G C++G + DA  +   +    + P++ ++N 
Sbjct: 377 VQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNI 436

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           +I G++ + D +   +    + +  + P +VTF++++  +     + + + + + +   G
Sbjct: 437 MIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHG 496

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           +EP    ++ L   Y   G   K   +L  M    + P VV +T VI G C   K++ ++
Sbjct: 497 LEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESV 556

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            + E M   G+ P+  TY T++  + +AK   +A ELL  M    + P  +T  ++ D  
Sbjct: 557 QLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGL 616

Query: 426 RAIGLAREAKRVLKSAEE 443
              G   +A RVL S ++
Sbjct: 617 CRYGDVEDADRVLVSLQD 634



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/444 (23%), Positives = 210/444 (47%), Gaps = 34/444 (7%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L +EG +P L+TYT L+    +    +  L L   +   G + + IL++ ++++  + G 
Sbjct: 282 LTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQ 341

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK---------- 129
           VDEA+++  +M+ +  +P   TY+ LI G    GK +++++L + M  ++          
Sbjct: 342 VDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSG 401

Query: 130 ------------------------NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
                                   N++P+   YNI++  +     +EEA  +  ++    
Sbjct: 402 ILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKA 461

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           I P  VT+N+L   + +  +   A ++L  ++ + + P+  T   +++ YC+EGN+    
Sbjct: 462 ITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLH 521

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
             L  M   ++ P +V +  +IKG    +  +   + L  M   G+ PD +T++TI+  +
Sbjct: 522 ELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCF 581

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
             A  M K  E+ DDM+   +EP    +++L  G  R G+ + A+ +L S++   ++   
Sbjct: 582 CKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTK 641

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
           V +TT+I   C     QRA+ ++ +M E G   ++K Y  ++    +      A+    +
Sbjct: 642 VAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCI 701

Query: 406 MEEKGVRPKKSTIQLVADSWRAIG 429
           M   GV P +   +++ +++   G
Sbjct: 702 MLSDGVSPDQEIFEMMLNAFHRAG 725



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/423 (21%), Positives = 192/423 (45%), Gaps = 20/423 (4%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E G + + ++   +   L R++RFK +                ++ + M+     S  V 
Sbjct: 56  EFGFQHSRVSRFLVSHVLARKRRFKDL---------------RLVLDQMLQEEVASRMVH 100

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +A+ +  KMK+   +P+  TYN+L+    +     +    ++    D     + RT +I+
Sbjct: 101 DALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIK----DSGTPQSARTSSII 156

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           V   C ++   +A   + +       P  V++NT+   Y + G    A+     M    +
Sbjct: 157 VDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGI 216

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            P+  +  I++ G    G+ME+A+     M++  + P++V +  + KGF  +    G  +
Sbjct: 217 LPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGARE 276

Query: 262 ALT-LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
            +  ++ + G+KPD+VT++ ++      G + +   +  D++ +G + ++ ++S+L    
Sbjct: 277 IIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSL 336

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            + G+  +A  +L  M    + P++V ++ +I G C   K+Q+A+ +Y++MC   I PN 
Sbjct: 337 CKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNS 396

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
             +  +L G  E      A      +    +RP  +   ++ D +  +G   EA R+ K 
Sbjct: 397 FAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKR 456

Query: 441 AEE 443
             +
Sbjct: 457 LRD 459



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 159/344 (46%), Gaps = 42/344 (12%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  KG   +A   F+ LI    RP +  Y  ++    +    +  + L  ++    + P 
Sbjct: 406 LCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPS 465

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLK 120
            + FN++I    ++  V EA ++ + +K  G +P+  TY TL+  Y   GN+ K  E L 
Sbjct: 466 IVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLL 525

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            + L    K+++P   TY ++++  C +  +EE+  ++  M A G+ PD +TYNT+ + +
Sbjct: 526 EMNL----KDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCF 581

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +  +A ++L +M  + + P   T  +++ G C+ G++EDA R L  +++  ++   
Sbjct: 582 CKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTK 641

Query: 241 VVFNSLIK---------------------GF-LDIKDSDGVDKALT-------------L 265
           V + ++IK                     GF + IKD   V   L              +
Sbjct: 642 VAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCI 701

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
           M   GV PD   F  +++A+  AG +    E+   M+K G+  D
Sbjct: 702 MLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 91/191 (47%), Gaps = 7/191 (3%)

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            L  M+E  ++P + T+++++       +M    ++++D+  +G        SI+  G  
Sbjct: 105 VLVKMKEQNLRPSIQTYNSLLYNLRHTDIMW---DVYNDIKDSGTPQSARTSSIIVDGL- 160

Query: 322 RAGEPQKAESILTSMRKYG--VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             G+ +  +++L   +  G    P+VV F T++S +C       A S +  M + GI P+
Sbjct: 161 -CGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPD 219

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             +Y  L+ G   A     A EL   ME++G++P   T ++VA  +  +GL   A+ +++
Sbjct: 220 TYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQ 279

Query: 440 SAEEDRQSMPN 450
               D    P+
Sbjct: 280 KMLTDEGLKPD 290


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 191/394 (48%), Gaps = 6/394 (1%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           + YT L++ L ++KR    L+++ ++   G +P+ + +N++I+   ++   D A ++F+ 
Sbjct: 80  VIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEH 139

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM------SQDKNVKPNDRTYNILVR 143
           MK   C P+  TYNTL+ G    GK E ++ L Q M        D    PN  TY++L+ 
Sbjct: 140 MKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLID 199

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C  N + +A  ++  M A G  PD +TY  L     +  +   A ++L EM +    P
Sbjct: 200 GLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVP 259

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  T   ++ G C+   + DA+  +  M      PN+V + +LI G   +         L
Sbjct: 260 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 319

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M + G  PD++ ++ +++    A  + +   +    V  GI+PD+  +S +  G  R+
Sbjct: 320 ADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRS 379

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
               +A  +L  ++  G  P+V++++T+I G C A K+  A  +YE M   G + ++ TY
Sbjct: 380 NRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTY 439

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            TL+ G  +A +   A  LL  M   G  P   T
Sbjct: 440 STLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMT 473



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 204/441 (46%), Gaps = 14/441 (3%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A   F+ +  +   P +   + L+  L + KR    L     ++  G+  D++++
Sbjct: 23  GEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIY 82

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            A+++   +   +D+A+ I  +M+D GC+P   TYN+LI G     +P+ + +L + M +
Sbjct: 83  TALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHM-K 141

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV-------ASGIQPDAVTYNTLARAY 180
                P+  TYN L+        +E A  +  +M+            P+ +TY+ L    
Sbjct: 142 SVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGL 201

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +     +A ++L  M+     P+  T  I+V G CKE  +  A   L  M +    PNL
Sbjct: 202 CKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNL 261

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +NSL+ G    +    V  AL LM +    G  P+VVT+ T++D     G +     +
Sbjct: 262 VTYNSLLHGLCRARR---VSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAM 318

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
             DM+  G  PD+ ++++L  G  +A +  ++ ++L      G+ P+VV +++VI G C 
Sbjct: 319 LADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCR 378

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           + ++  A  +   +   G  P++  Y TL+ G  +A +   A +L +VM   G      T
Sbjct: 379 SNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVT 438

Query: 418 IQLVADSWRAIGLAREAKRVL 438
              + D     G   EA  +L
Sbjct: 439 YSTLIDGLCKAGRVDEAHLLL 459



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 185/395 (46%), Gaps = 7/395 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P +ITYT LV  L ++ +  +   ++ ++   G  P+ + +N++++    +  V +A
Sbjct: 221 GCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDA 280

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + + + M   GC P   TY TLI G   VG+ +++  +L  M  DK   P+   YN+L+ 
Sbjct: 281 LALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMI-DKGGTPDLMIYNMLIN 339

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C  + ++E+  ++ + V+ GI+PD VTY+++     +      A ++L  +++    P
Sbjct: 340 GLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPP 399

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +      ++ G CK G +++A      M       ++V +++LI G       D     L
Sbjct: 400 DVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLL 459

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M   G  P  +T+++++        + +  E+ ++M ++   P    ++IL  G  R 
Sbjct: 460 ARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRM 519

Query: 324 GEPQKAESILTSMRKY-----GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
                A  +L   +       G   + + ++++I G C A ++  A+  +++M + G+ P
Sbjct: 520 ERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIP 579

Query: 379 NLKTYETLLWGYGEAKQPWRAEEL-LQVMEEKGVR 412
           +  TY  LL G  ++K       L L  M + G R
Sbjct: 580 DHITYSILLEGLKKSKDLHELRHLVLDQMVQLGYR 614



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 171/367 (46%), Gaps = 14/367 (3%)

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD   + A++      G +D+A + F +M+     P     + LI G     +  ++L+
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             + M Q   +  +   Y  L+     +  +++A  ++++M   G +P+ VTYN+L    
Sbjct: 66  CFRAM-QGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH--- 237
            +  E  RA+++   M++ +  P+  T   ++ G  + G +E AM     M +   H   
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 238 ----PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGL 290
               PN++ ++ LI G      ++ V +A+ L+E     G  PDV+T++ ++D       
Sbjct: 185 DRCSPNVITYSVLIDGLC---KANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESK 241

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           +    E+  +M+ AG  P++  ++ L  G  RA     A +++  M   G  PNVV + T
Sbjct: 242 VAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGT 301

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I G C   +++ A ++   M + G  P+L  Y  L+ G  +A Q   +  LL+     G
Sbjct: 302 LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 361

Query: 411 VRPKKST 417
           ++P   T
Sbjct: 362 IKPDVVT 368



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 152/329 (46%), Gaps = 14/329 (4%)

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
           C+P   TY  L++G+   G+ +++ +    M + KN+ PN    +IL+   C      +A
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEM-RSKNLVPNVFLCSILIDGLCKAKRSIDA 63

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
                 M  SGI  D V Y  L     +     +A  +L EM+++   PN  T   ++ G
Sbjct: 64  LRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF----- 269
            CK    + A      MK +E  P++V +N+L+ G      +  +++A+ L +E      
Sbjct: 124 LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLF---RTGKLERAMALFQEMLDRRS 180

Query: 270 -----GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
                   P+V+T+S ++D    A  + +  E+ + M   G  PD+  ++IL  G  +  
Sbjct: 181 HDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKES 240

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           +   A  +L  M   G  PN+V + +++ G C A ++  A+++   M   G  PN+ TY 
Sbjct: 241 KVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYG 300

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           TL+ G  +  +   A  +L  M +KG  P
Sbjct: 301 TLIDGLCKVGRVKDACAMLADMIDKGGTP 329



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 138/314 (43%), Gaps = 42/314 (13%)

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK--------- 217
           QPD  TY  L R + + GE  +A++   EM++  + PN   C I++ G CK         
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 218 --------------------------EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
                                     E  ++ A+  L+ M++    PN+V +NSLI G  
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV-------KA 304
              + D   +    M+     P +VT++T++D     G + +   +F +M+         
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
              P++  +S+L  G  +A    +A  +L SM+  G  P+V+ +T ++ G C   K+  A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             +  +M + G  PNL TY +LL G   A++   A  L++ M  +G  P   T   + D 
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305

Query: 425 WRAIGLAREAKRVL 438
              +G  ++A  +L
Sbjct: 306 LCKVGRVKDACAML 319



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 92/186 (49%), Gaps = 8/186 (4%)

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           +PDV T++ ++  +   G + + Q  FD+M    + P++ + SIL  G  +A     A  
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
              +M+  G+  + V++T ++SG     ++ +A++I  +M + G  PN+ TY +L+ G  
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW-------RAIGLAREAKRVLKSAEED 444
           +  +P RA+EL + M+     P   T   + D         RA+ L +E     +S + D
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLD-RRSHDMD 184

Query: 445 RQSMPN 450
            +  PN
Sbjct: 185 DRCSPN 190



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 9/98 (9%)

Query: 20  LIEEGHR----PTLITYTTLVAALTRQKRFKSILSLISK-----VEKDGMKPDSILFNAM 70
           L+EE  R    P+ +TY  L+  + R +R  S + L+ +     V   G   D+I ++++
Sbjct: 493 LVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSL 552

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
           I+   ++G V EA+  FQ+M D+G  P   TY+ L++G
Sbjct: 553 IDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEG 590


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 219/457 (47%), Gaps = 42/457 (9%)

Query: 10  PHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSI--------------------- 48
           P +A + FN +I  G  P   T+  L+  L +   F+                       
Sbjct: 111 PEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGNVKLDVYSFGIM 170

Query: 49  -------------LSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGC 95
                          ++ ++E+ G+ P+ +++  +I+ C ++G+++   ++F KM +   
Sbjct: 171 IKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDV 230

Query: 96  KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
                TY  LI G+  +G  ++ ++L + M +   + PN  TYN ++   C+   +  A+
Sbjct: 231 VANQYTYTVLINGFFKMGLKKDGIELYEKM-KLTGIVPNVYTYNSMICRCCNDGKLNNAF 289

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
            +  +M   G+  + VTYNTL     Q      AE+++  M+ + + PN  +   ++ GY
Sbjct: 290 ELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGY 349

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C  GN++ A     +MK     P+L  +N LI GF + K+S GV   +  ME  G+ P  
Sbjct: 350 CSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSK 409

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           VT++ +MDA   +  + K  +I+  M KAG+  DI+++ +L  G    G+ ++A  +  S
Sbjct: 410 VTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKS 469

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           + +  + PN V++ T+I G+C      RA+ + ++M E G+ PN+ +Y + +    + ++
Sbjct: 470 LDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEK 529

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
              AE LL+ M E G++P  S        W  I  AR
Sbjct: 530 WTEAEVLLKDMIELGLKPSISI-------WNMISKAR 559



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/459 (23%), Positives = 207/459 (45%), Gaps = 50/459 (10%)

Query: 27  PT-LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           PT ++ +  ++ A  R +  +  L   +++   G+ P S  FN ++    +S   ++A +
Sbjct: 92  PTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWR 151

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +F + K +  K    ++  +IKG   VG  ++  ++L  M ++  + PN   Y  L+   
Sbjct: 152 VFNETKGN-VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQM-EEMGLSPNVVVYTTLIDGC 209

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C    IE    + YKM    +  +  TY  L   + + G      ++  +M+   + PN 
Sbjct: 210 CKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNV 269

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   ++   C +G + +A      M+E  V  N+V +N+LI G    +     ++ +  
Sbjct: 270 YTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCR 329

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY----- 320
           M+  G+ P++++++T++D + S G + K   +F+ M  +G  P +  ++IL  G+     
Sbjct: 330 MKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKN 389

Query: 321 ------------------------------VRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
                                         VR+   +KA  I +SM K G+  ++ ++  
Sbjct: 390 SAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGV 449

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I G C    M+ A  +++ + E+ + PN   Y T+++GY +    +RA  LL+ M E G
Sbjct: 450 LIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENG 509

Query: 411 VRPK----KSTIQLVA--DSWRAIGLAREAKRVLKSAEE 443
           + P      STIQ++   + W       EA+ +LK   E
Sbjct: 510 MVPNVASYNSTIQILCKDEKW------TEAEVLLKDMIE 542



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 144/279 (51%), Gaps = 5/279 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK + A  +F+ + E G    ++TY TL+  L +++R      L+ ++++DG+ P+ I +
Sbjct: 283 GKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISY 342

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I+     GN+D+A  +F +MK SG  P+ +TYN LI G+           +++ M +
Sbjct: 343 NTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREM-E 401

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + + P+  TY IL+ A    ++IE+A+ +   M  +G+  D   Y  L       G+  
Sbjct: 402 ARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMK 461

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++   +    ++PN+     ++ GYCKEG+   A+R L  M E  + PN+  +NS I
Sbjct: 462 EASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTI 521

Query: 248 KGFLDIKDSDGVDKALTL--MEEFGVKPDVVTFSTIMDA 284
           +  +  KD    +  + L  M E G+KP +  ++ I  A
Sbjct: 522 Q--ILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKA 558



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/359 (22%), Positives = 155/359 (43%), Gaps = 46/359 (12%)

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           E+A     +M+  G+ P + T+N L     +     +A ++  E + N V+ +  + GI+
Sbjct: 112 EQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGN-VKLDVYSFGIM 170

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           + G C+ G ++                         KGF          + L  MEE G+
Sbjct: 171 IKGCCEVGYLD-------------------------KGF----------EVLGQMEEMGL 195

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            P+VV ++T++D     G + + +++F  M +  +  + + +++L  G+ + G  +    
Sbjct: 196 SPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIE 255

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +   M+  G+ PNV  + ++I   CN  K+  A  ++++M E G+  N+ TY TL+ G  
Sbjct: 256 LYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLC 315

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
           + ++   AE L+  M+  G+ P   +   + D + +IG   +A  +    +   QS    
Sbjct: 316 QERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLA 375

Query: 452 KDEIAVESIHRKQNLSASNSTFLQIPGVVSSEHNGSSAAKIRSQIVL----RSDTVWTA 506
              I +      +N +           V   E  G S +K+   I++    RSD +  A
Sbjct: 376 TYNILIAGFSEAKNSAGVTDM------VREMEARGLSPSKVTYTILMDALVRSDNIEKA 428



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 71/144 (49%), Gaps = 1/144 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ LV      +A  I++ + + G    +  Y  L+  L      K    L   +++  +
Sbjct: 416 MDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHL 475

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP+ +++N MI    + G+   A+++ ++M ++G  P  ++YN+ I+      K  E+  
Sbjct: 476 KPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEV 535

Query: 121 LLQLMSQDKNVKPNDRTYNILVRA 144
           LL+ M +   +KP+   +N++ +A
Sbjct: 536 LLKDMIE-LGLKPSISIWNMISKA 558


>gi|145357164|ref|XP_001422791.1| pentatrichopeptide repeat (PPR) protein [Ostreococcus lucimarinus
           CCE9901]
 gi|144583035|gb|ABP01150.1| pentatrichopeptide repeat (PPR) protein [Ostreococcus lucimarinus
           CCE9901]
          Length = 629

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 216/434 (49%), Gaps = 40/434 (9%)

Query: 19  CLIEEGHRPTLITYTTLVAALTRQKRFKSILS-LISKVEKDGMKPDSILFNAMINACSES 77
            LI +GHRPT  T+T +++ L    R K  L  ++  +E+ G   D  ++NA+ +A    
Sbjct: 85  ALIRDGHRPTAKTFTAVISTLGAMGRAKEALDDVLPMIEEYGDDVDVAVWNAVAHAFCAG 144

Query: 78  GNVDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
           G+   A KI  +M  + G     +T+  +I  Y   G+     +L++ MS +  + P++R
Sbjct: 145 GDPAGAEKIVDRMVGEDGVGVNGATHPEIIYTYAKRGEANRVYRLIRRMSSEHGIIPDER 204

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
            YN  +R  C ++ +E+A  V+ +                          +  E+   E 
Sbjct: 205 AYNAFLRGLCERDDLEDAEEVLRR--------------------------WNNEKFDLER 238

Query: 197 QNNQ----VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL- 251
           Q+++     +P+  + G+++  + + GNM  A + L +M+   + P+L +FN LI G+L 
Sbjct: 239 QSDRGGRVSKPSAASYGLLIDAWTRRGNMLAARKLLQQMQWERIAPSLPLFNMLIDGYLK 298

Query: 252 --DIKDSDGVDKALTL-----MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
             +++ ++G+ + L       ME  G+KPD VT++  +D W++ G +  C+ IF+ M + 
Sbjct: 299 QENMRAAEGLFRELESSGTWDMESLGIKPDNVTYTLFLDYWANQGQVDACERIFNRMHRK 358

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
            + PD+  +  L K Y RA +   AE++L  + +  V P+V +++ V++  C    M RA
Sbjct: 359 EVAPDVTAYGTLVKAYARARDSDGAEAVLDRLAEAKVAPSVAIYSAVVAAHCTIGNMSRA 418

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             + E+M + G+ PN +T+    WGYG+ +      E+ ++M   G++ K +    +  +
Sbjct: 419 RDVLERMFDAGLRPNERTFAHFAWGYGQLEDINGIAEVAKLMLASGLKLKGANRTAIVRA 478

Query: 425 WRAIGLAREAKRVL 438
               G++  A + L
Sbjct: 479 CEECGMSMSAVQAL 492



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/178 (19%), Positives = 80/178 (44%), Gaps = 1/178 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +P  +TYT  +     Q +  +   + +++ +  + PD   +  ++ A + + + D A
Sbjct: 324 GIKPDNVTYTLFLDYWANQGQVDACERIFNRMHRKEVAPDVTAYGTLVKAYARARDSDGA 383

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
             +  ++ ++   P+ + Y+ ++  +  +G    +  +L+ M  D  ++PN+RT+     
Sbjct: 384 EAVLDRLAEAKVAPSVAIYSAVVAAHCTIGNMSRARDVLERMF-DAGLRPNERTFAHFAW 442

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
            +     I     V   M+ASG++        + RA  + G +  A Q L +  N ++
Sbjct: 443 GYGQLEDINGIAEVAKLMLASGLKLKGANRTAIVRACEECGMSMSAVQALLDRINPEM 500



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/112 (22%), Positives = 53/112 (47%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++    +G+      IFN +  +   P +  Y TLV A  R +      +++ ++ +  +
Sbjct: 336 LDYWANQGQVDACERIFNRMHRKEVAPDVTAYGTLVKAYARARDSDGAEAVLDRLAEAKV 395

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNV 112
            P   +++A++ A    GN+  A  + ++M D+G +P   T+     GYG +
Sbjct: 396 APSVAIYSAVVAAHCTIGNMSRARDVLERMFDAGLRPNERTFAHFAWGYGQL 447


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 220/429 (51%), Gaps = 10/429 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+ HEA  +   +   G  PT  +Y+ L+  L ++ + +  L LI ++ +  +KP  + +
Sbjct: 337 GELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTY 396

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +++ +   +SG  + ++ +F  +   G K    +YNTLI G+        + KL+  M  
Sbjct: 397 SSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRM 456

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           + +V PN  T+N L+  +C +  +++A  V   M+  G+Q +  T N +A  + + G  +
Sbjct: 457 NGSV-PNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFW 515

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A +++ E+Q+  + PN  T  I++   CKE   E A   L  M +  V P  + +N+LI
Sbjct: 516 EALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLI 575

Query: 248 KGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            G+   K S+   KAL L   M + G+ P +VT++ +++ +S+   M +   +F +M+K 
Sbjct: 576 DGY--AKQSNPT-KALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKK 632

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+ PD  +F+ +  G+ + G+ + A ++   M ++G  PNVV +T +I G+    +M +A
Sbjct: 633 GLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKA 692

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             ++ KM    + P+  TY  L++GY       R  E+   M+E GV P  +     A  
Sbjct: 693 DFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTA---YATL 749

Query: 425 WRAIGLARE 433
              +G+ RE
Sbjct: 750 GLHLGVVRE 758



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 218/456 (47%), Gaps = 36/456 (7%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  PT++TY   +  L R    +  L LI  +       +S  +NA+I+    +G + EA
Sbjct: 283 GESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEA 342

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            ++ + M+  G  PT  +Y+ LI G    G+ E++L L++ M Q  NVKP+  TY+ L  
Sbjct: 343 FELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQS-NVKPSLVTYSSLFD 401

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C     E + ++ + + A G + D ++YNTL   +    +   A +++ EM+ N   P
Sbjct: 402 GLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVP 461

Query: 204 NERTCGIIVSGYCK-----------------------------------EGNMEDAMRFL 228
           N  T   ++ G+CK                                   EG+  +A++ +
Sbjct: 462 NSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLI 521

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
             +++L + PN   +N +IK     + ++   + L +M +  V P  + ++T++D ++  
Sbjct: 522 NEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQ 581

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
               K   ++  M+K GI P I  +++L   +    + Q+A  +   M K G+ P+ ++F
Sbjct: 582 SNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIF 641

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           T +I+G+C    M+ A ++YE+M + G +PN+ TY  L+ GY + K+  +A+ L   M+ 
Sbjct: 642 TCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKR 701

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
             V P   T   +   ++++G +   + +    +E+
Sbjct: 702 DNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKEN 737



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/421 (23%), Positives = 196/421 (46%), Gaps = 6/421 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA-CSES--GNV 80
           G    +++   L+       + + I SL  +++  G  P+   +  M+N  C  S   N+
Sbjct: 208 GLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNI 267

Query: 81  D--EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
           D  +A ++ ++M+ +G  PT  TY   I G    G  E +L+L++ + + +N   N   Y
Sbjct: 268 DIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDL-RIRNQPLNSYCY 326

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           N ++  +C    + EA+ ++  M + GI P A +Y+ L     + G+  +A  ++ EM  
Sbjct: 327 NAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQ 386

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
           + V+P+  T   +  G CK G  E ++   + +       +++ +N+LI GF+  +D   
Sbjct: 387 SNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGS 446

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
             K +  M   G  P+  TF+ ++  +     + K  E+F  M+K G++ +I   +I+A 
Sbjct: 447 ACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMAD 506

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
            + R G   +A  ++  ++  G+ PN   +  VI   C   K ++A  +   M +  + P
Sbjct: 507 EFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFP 566

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
               Y TL+ GY +   P +A  L   M + G+ P   T  ++ + +      +EA  + 
Sbjct: 567 CAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLF 626

Query: 439 K 439
           K
Sbjct: 627 K 627



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 150/317 (47%), Gaps = 6/317 (1%)

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ--YG---ETYRAEQML 193
           N L+  +   N  E   ++  ++  SG  P+  TY  +   Y +  +G   +  +A ++L
Sbjct: 217 NFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVL 276

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
            EM+ N   P   T G  + G C+ G +E A+R +  ++      N   +N++I  F   
Sbjct: 277 EEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRN 336

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
            +     + L  M   G+ P   ++S ++D     G + K  ++ ++MV++ ++P +  +
Sbjct: 337 GELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTY 396

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           S L  G  ++G  + + S+  ++   G   +V+ + T+I+G+     M  A  +  +M  
Sbjct: 397 SSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRM 456

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
            G  PN  T+  L+ G+ + ++  +A E+  +M + GV+    T  ++AD +   G   E
Sbjct: 457 NGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWE 516

Query: 434 AKRVLKSAEEDRQSMPN 450
           A +++    +D   +PN
Sbjct: 517 ALKLINEV-QDLGIVPN 532



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/300 (21%), Positives = 147/300 (49%), Gaps = 11/300 (3%)

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           QD ++  +    N+L++ +   N + +A +V  +    G++ + ++ N L   +A+  +T
Sbjct: 170 QDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQT 229

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE--GNMEDAMRFLYRMKELEVH---PNLV 241
                +  E++++   PN  T  I+++ YCK   G   D ++    ++E+E++   P +V
Sbjct: 230 EFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVV 289

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT---FSTIMDAWSSAGLMGKCQEIF 298
            + + I G   +  +  V+ AL L+ +  ++   +    ++ ++  +   G + +  E+ 
Sbjct: 290 TYGAYIHG---LCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELL 346

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           +DM   GI P  + +SIL  G  + G+ +KA  ++  M +  V P++V ++++  G C +
Sbjct: 347 EDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKS 406

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
              + ++S++  +   G   ++ +Y TL+ G+   +    A +L+  M   G  P   T 
Sbjct: 407 GLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTF 466



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 85/171 (49%), Gaps = 1/171 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +  P +A  ++  +++ G  P+++TYT L+   + + + +    L  ++ K G+ PD I+
Sbjct: 581 QSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEII 640

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F  +I    + G++  A  ++++M   G  P   TY  LI GY  + + +++  L   M 
Sbjct: 641 FTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMK 700

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +D NV P+  TY  L+  + S    +    +  +M  +G+ P+   Y TL 
Sbjct: 701 RD-NVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATLG 750



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 1/141 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+   + K  EA+Y+F  +I++G  P  I +T ++A   +    KS  +L  ++ + G 
Sbjct: 610 INMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGK 669

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +  +I+   +   +D+A  +F KMK     P   TY  LI GY ++G  +   +
Sbjct: 670 SPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVRE 729

Query: 121 LLQLMSQDKNVKPNDRTYNIL 141
           +   M ++  V PN   Y  L
Sbjct: 730 MFNEMKEN-GVFPNYTAYATL 749



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 39/206 (18%), Positives = 79/206 (38%), Gaps = 27/206 (13%)

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK----------------------AGIE 307
           G    +  F  I+   +SAGL  + Q    D++                       A + 
Sbjct: 116 GFSHSIYAFKIIIHVLASAGLQMEVQIFLRDIISYYKEVNLDVSELFSTLLDSPQDAHMG 175

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
             I V ++L K +        A  +    R++G+  N++    +++ +  A + +   S+
Sbjct: 176 GSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSL 235

Query: 368 YEKMCEIGINPNLKTYETLL-----WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
           +E++ + G +PN+ TY  ++       +G+     +A E+L+ ME  G  P   T     
Sbjct: 236 FEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYI 295

Query: 423 DSWRAIGLAREAKRVLKSAEEDRQSM 448
                 G    A R+++      Q +
Sbjct: 296 HGLCRAGCVEFALRLIRDLRIRNQPL 321


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 218/414 (52%), Gaps = 5/414 (1%)

Query: 16  IFNCLIEEGH--RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA 73
           IF CL +  H    +   +  +V + +        ++ I+  +  G  P  + +N++++A
Sbjct: 127 IFQCLKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDA 186

Query: 74  CSES-GNVD-EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
              S G+V   A +++++M  S   P   TYN LI+G+ +VG+ ++ L     M ++  +
Sbjct: 187 IVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCL 246

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PN  TYN L+ A+C    I+EA+ ++  M + G+QP+ ++YN +     + G    A +
Sbjct: 247 -PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWE 305

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L EM      P+E T   +++GYCKEGN   A+     M    V P++V + +LI    
Sbjct: 306 ILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMC 365

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
             ++ +   +    M   G++P+  T++T++D +S  GL+ +   I ++M ++G  P + 
Sbjct: 366 KARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVV 425

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++    G+      ++A  ++  M + G+ P+VV ++T+ISG+C   ++ RA  + ++M
Sbjct: 426 TYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEM 485

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            E G++P+  TY +L+ G  E ++   A +L Q M + G+ P + T   + +++
Sbjct: 486 VEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAY 539



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 128/515 (24%), Positives = 238/515 (46%), Gaps = 33/515 (6%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  ++  +I     P + TY  L+         +  L    ++E++G  P+ + +N +I+
Sbjct: 198 AEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLID 257

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
           A  + G +DEA  + + M   G +P   +YN +I G    G  +E+ ++L+ M   K   
Sbjct: 258 AYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGY-KGFT 316

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P++ TYN L+  +C + +  +A  +  +MV +G+ P  VTY  L  +  +     RA + 
Sbjct: 317 PDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEF 376

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             +M+   +RPNERT   ++ G+ ++G + +A R L  M E    P++V +N+ I G   
Sbjct: 377 FDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCV 436

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           ++  +     +  M E G+ PDVV++STI+  +   G + +  ++  +MV+ G+ PD   
Sbjct: 437 LERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVT 496

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           +S L +G        +A  +   M   G+ P+   +TT+I+ +C    + +A+ ++++M 
Sbjct: 497 YSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMI 556

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELL-QVMEEKGVRPKKSTIQLVADSWRAI--- 428
             G  P+  TY  L+ G  +  +   A+ LL +++ E+ V P   T   + ++   I   
Sbjct: 557 HKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESV-PSDVTYDTLIENCSNIEFK 615

Query: 429 ------------GLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQI 476
                       GL  EA RV +S  E           + +    R  NL  + + + ++
Sbjct: 616 SVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEM 675

Query: 477 PGVVSSEHNGSSAAKIRSQIVLRSDTVWTATKSLF 511
                          I S  V  + TV T  K+LF
Sbjct: 676 ---------------IHSGFVPHTVTVITLIKALF 695



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/477 (23%), Positives = 217/477 (45%), Gaps = 18/477 (3%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +   +  +G +P LI+Y  ++  L R+   K    ++ ++   G  PD + +
Sbjct: 263 GRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTY 322

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++N   + GN  +A+ I  +M  +G  P+  TY  LI           +++    M +
Sbjct: 323 NTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM-R 381

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + ++PN+RTY  L+  +  +  + EA+ ++ +M  SG  P  VTYN     +       
Sbjct: 382 IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERME 441

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  ++ EM    + P+  +   I+SG+C++G ++ A +    M E  V P+ V ++SLI
Sbjct: 442 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 501

Query: 248 KGFLDIKD-SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +G  +++  ++  D +  ++ + G+ PD  T++T+++A+   G + K   + D+M+  G 
Sbjct: 502 QGLCEMRRLTEACDLSQEML-DMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGF 560

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS------------- 353
            PD   +S+L  G  +    ++A+ +L  +      P+ V + T+I              
Sbjct: 561 LPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVAL 620

Query: 354 --GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
             G+C    M  A  ++E M E    P    Y  ++ G+       +A  L + M   G 
Sbjct: 621 IKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGF 680

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSA 468
            P   T+  +  +    G+  E   V+       +    +  ++ VE  H++ N+ A
Sbjct: 681 VPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEA 737



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 197/405 (48%), Gaps = 22/405 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G   EA  I   +  +G  P  +TY TL+    ++  F   L + +++ ++G+
Sbjct: 291 INGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGV 350

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + + A+IN+  ++ N++ AM+ F +M+  G +P   TY TLI G+   G   E+ +
Sbjct: 351 SPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYR 410

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M++     P+  TYN  +   C    +EEA  VV +MV  G+ PD V+Y+T+   +
Sbjct: 411 ILNEMTES-GFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 469

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + GE  RA QM  EM    V P+  T   ++ G C+   + +A      M ++ + P+ 
Sbjct: 470 CRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDE 529

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE- 296
             + +LI  +    D   ++KAL L +E    G  PD VT+S +++  +      + +  
Sbjct: 530 FTYTTLINAYCVEGD---LNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRL 586

Query: 297 ----IFDDMVKAGIEPD--------IHVFSILA--KGYVRAGEPQKAESILTSMRKYGVH 342
               I+++ V + +  D        I   S++A  KG+   G   +A+ +  SM +    
Sbjct: 587 LFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHK 646

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           P   ++  +I G C    + +A ++Y++M   G  P+  T  TL+
Sbjct: 647 PGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLI 691



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 171/356 (48%), Gaps = 22/356 (6%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  +EA+ I N + E G  P+++TY   +      +R +  L ++ ++ + G+ PD + 
Sbjct: 402 QGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVS 461

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +I+     G +D A ++ Q+M + G  P   TY++LI+G   + +  E+  L Q M 
Sbjct: 462 YSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEM- 520

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            D  + P++ TY  L+ A+C +  + +A ++  +M+  G  PDAVTY+ L     +   T
Sbjct: 521 LDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQART 580

Query: 187 YRAEQMLFEMQNNQVRPNERT-------CGII--------VSGYCKEGNMEDAMRFLYRM 231
             A+++LF++   +  P++ T       C  I        + G+C +G M +A R    M
Sbjct: 581 REAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESM 640

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSA 288
            E    P   V+N +I G         + KA  L +E    G  P  VT  T++ A    
Sbjct: 641 VERNHKPGEAVYNVIIHGHCR---GGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKE 697

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           G+  +  E+  D +++    +  +  +L +   + G  +   ++LT M K G+ PN
Sbjct: 698 GMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPN 753


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 202/418 (48%), Gaps = 8/418 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  +A  ++  +I+ G+ P ++TY TL+    +       L +     K G  PD
Sbjct: 20  LCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPD 79

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +NA+IN   ++  +DEA +I Q+M      P   TYN+L+ G    G+ +E+    +
Sbjct: 80  VVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEA----R 135

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSK-NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           ++  DK   PN  TY+ L+   C +   + EA  +   ++  G +P+  TYN L     +
Sbjct: 136 MLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLK 195

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                 A ++   +  + + P+  T  + + G CK G +EDA+  L  M E    P++V 
Sbjct: 196 EDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVS 255

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
            N++I G    K  D  +  L+ ME  G  P+ ++F+T++     AG   K    F +M+
Sbjct: 256 HNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEML 315

Query: 303 KAGIEPDIHVFSILAKGYVRA---GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           K G++P +  ++IL  G  +A   G  ++A ++  +M + G  P+VV ++ +I G   A 
Sbjct: 316 KRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAG 375

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           K+  A  +   M   G  PN+ TY +L+ G    ++   A EL   M EKG  P   T
Sbjct: 376 KLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTIT 433



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 203/403 (50%), Gaps = 15/403 (3%)

Query: 55  VEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK 114
           + K G  P+ I +NA+++     G + +A  ++++M  +G  P   TYNTL+ G+  VG+
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 115 PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYN 174
            +E+LK+    +  +   P+  TYN L+  +C  + ++EA  ++ +MV+  + PD VTYN
Sbjct: 61  LDEALKIFD-GAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYN 119

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE-GNMEDAMRFLYRMKE 233
           +L     + G    A  ++ +       PN  T   ++SG C+E   + +A++    + +
Sbjct: 120 SLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLK 176

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME---EFGVKPDVVTFSTIMDAWSSAGL 290
               P +  +N LI G L     D V++A  L     + G++PD +T++  +D    AG 
Sbjct: 177 QGYEPEVPTYNILIDGLL---KEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGR 233

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           +     +  DM + G  PD+   + +  G  +     +AE +L+ M   G  PN + F T
Sbjct: 234 VEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNT 293

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE---LLQVME 407
           +I G C A K ++AM+ +++M + G+ P + TY  L+ G  +A+Q  R +E   L   M 
Sbjct: 294 LICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMI 353

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           EKG  P   T   + D     G   +A+R+L  A E +  +PN
Sbjct: 354 EKGRVPDVVTYSALIDGLGKAGKLDDARRLL-GAMEAKGCIPN 395



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 163/349 (46%), Gaps = 8/349 (2%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  I   ++ E   P ++TY +LV  L +  R      LI  V+K G  P+ I ++
Sbjct: 95  KLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLI--VDK-GFSPNVITYS 151

Query: 69  AMINA-CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            +I+  C E   V EA+K+F  +   G +P   TYN LI G     +  E+ +L   + +
Sbjct: 152 TLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVK 211

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              ++P+  TY + +   C    +E+A  ++  M   G  PD V++N +     +     
Sbjct: 212 -HGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVD 270

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            AE +L  M+     PN  +   ++ G C+ G  + AM     M +  V P +V +N L+
Sbjct: 271 EAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILV 330

Query: 248 KGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            G    +    + +A+TL   M E G  PDVVT+S ++D    AG +   + +   M   
Sbjct: 331 DGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAK 390

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
           G  P+++ ++ L  G     +  +A  +  +M + G  P+ + + T+IS
Sbjct: 391 GCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIIS 439



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 138/276 (50%), Gaps = 4/276 (1%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +F  ++++G+ P + TY  L+  L ++ R      L S + K G++PD+I +   I
Sbjct: 166 EALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFI 225

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   ++G V++A+ + + M + GC P   ++N +I G     + +E+  LL  M + K  
Sbjct: 226 DGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGM-EAKGC 284

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PN  ++N L+   C     ++A     +M+  G++P  VTYN L     +  +  R ++
Sbjct: 285 SPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKE 344

Query: 192 --MLFEMQNNQVR-PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
              LF+    + R P+  T   ++ G  K G ++DA R L  M+     PN+  +NSLI 
Sbjct: 345 AITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLIS 404

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
           G   ++  D   +    M E G  PD +T+ TI+ A
Sbjct: 405 GLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 93/182 (51%), Gaps = 4/182 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  + +  EA  + + +  +G  P  I++ TL+    R  ++K  ++   ++ K G+
Sbjct: 260 INGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGV 319

Query: 61  KPDSILFNAMINACSES---GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
           KP  + +N +++   ++   G + EA+ +F  M + G  P   TY+ LI G G  GK ++
Sbjct: 320 KPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDD 379

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           + +LL  M + K   PN  TYN L+   C    ++EA  +   MV  G  PD +TY T+ 
Sbjct: 380 ARRLLGAM-EAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438

Query: 178 RA 179
            A
Sbjct: 439 SA 440


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 213/442 (48%), Gaps = 2/442 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG    A+ +F  L  +G  PT+ TY  ++    ++  FK+I  L+ ++   G+  +  +
Sbjct: 252 KGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQV 311

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I+A  + G++ +A++  + M + GCKP   TYNTLI G    GK  E+ +LL+  +
Sbjct: 312 YNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLE-QA 370

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K + PN  +Y  L+ A+C +   + A N + +M   G +PD VTY  L       GE 
Sbjct: 371 LGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEV 430

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A  +  +M    V P+     I++SG CK+  +  A   L  M +  V P+  V+ +L
Sbjct: 431 DVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATL 490

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + GF+   + D   K   L  E G+ P +V ++ ++  +   G+M       + M K  +
Sbjct: 491 VDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHL 550

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD   +S +  GYV+  +   A+ +   M K    PNVV +T++I+G+C    + R++ 
Sbjct: 551 APDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLK 610

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           I+ +M   G+ PN+ TY  L+  + +  +   A    + M      P   T   + + + 
Sbjct: 611 IFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFS 670

Query: 427 AIGLAREAKRVLKSAEEDRQSM 448
             G  R         +E++QSM
Sbjct: 671 KNG-TRAISEKGNEFQENKQSM 691



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 133/535 (24%), Positives = 251/535 (46%), Gaps = 28/535 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIE---EGHRPTLITYTT--LVAALTRQKRFKSILSLISKV 55
           +N+LV  G+   A  +++ ++E    G R  +  Y+T  +V  L ++ + +    LI   
Sbjct: 172 LNMLVKLGRIEIARKLYDEMLEIDGAGDR-CVDNYSTCIMVKGLCKEGKLEEGRKLIEDR 230

Query: 56  EKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKP 115
              G  P+ I +N +I+   + G+++ A  +F ++K  G  PT  TY  +I G+   G  
Sbjct: 231 WGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDF 290

Query: 116 EESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
           +   +LL  M+  + +  N + YN ++ A      I +A   +  M+  G +PD VTYNT
Sbjct: 291 KAIDRLLMEMNS-RGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNT 349

Query: 176 LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
           L     + G+   A+Q+L +     + PN+ +   ++  YCK+G  + A  +L  M E  
Sbjct: 350 LISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERG 409

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTLME---EFGVKPDVVTFSTIMDAWSSAGLMG 292
             P+LV + +L+ G +   +   VD ALT+ E   E GV PD   ++ +M        + 
Sbjct: 410 HKPDLVTYGALVHGLVVAGE---VDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLP 466

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
             + +  +M+   + PD  V++ L  G++R G   +A  +     + G++P +V +  +I
Sbjct: 467 AAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMI 526

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
            G+C    M+ AM+   +M +  + P+  TY T++ GY +      A+++ + M +   +
Sbjct: 527 KGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCK 586

Query: 413 PKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS--MPNKKD-EIAVESIHRKQNLSAS 469
           P   T   + + +   G   +  R LK   E +    +PN     I + S  ++  L  +
Sbjct: 587 PNVVTYTSLINGFCRKG---DLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDA 643

Query: 470 NSTFLQ------IPGVVSSEH--NGSSAAKIRSQIVLRSDTVWTATKSLFVNTYG 516
            S F +      +P  V+  +  NG S    R+ I  + +      +S+F+N +G
Sbjct: 644 ASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRA-ISEKGNEFQENKQSMFLNFFG 697



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/493 (23%), Positives = 227/493 (46%), Gaps = 31/493 (6%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ- 88
             Y++L+  L R + F  +  ++  +  + M P     + +I A S+SG V++A++++  
Sbjct: 95  FAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYF 154

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ-----DKNVKPNDRTYNILVR 143
            +K     P     N+L+     +G+ E + KL   M +     D+ V  ++ +  I+V+
Sbjct: 155 VLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCV--DNYSTCIMVK 212

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C +  +EE   ++      G  P+ + YNTL   Y + G+   A  +  E++     P
Sbjct: 213 GLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLP 272

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG-VDKA 262
              T G I++G+CK+G+ +   R L  M    +  N+ V+N++I    D +   G + KA
Sbjct: 273 TVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTII----DARYKHGHIVKA 328

Query: 263 LTLME---EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
           +  +E   E G KPD+VT++T++      G + +  ++ +  +  G+ P+   ++ L   
Sbjct: 329 VETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHA 388

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y + G   +A + L  M + G  P++V +  ++ G   A ++  A++I EKM E G+ P+
Sbjct: 389 YCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPD 448

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
              Y  L+ G  +  +   A+ LL  M ++ V P       + D +   G   EA+++ +
Sbjct: 449 AGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFE 508

Query: 440 SAEEDRQS---------------MPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSEH 484
              E   +                   KD +A  +  +K++L+    T+  +      +H
Sbjct: 509 LTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQH 568

Query: 485 NGSSAAKIRSQIV 497
           +   A K+  ++V
Sbjct: 569 DLDGAQKMFREMV 581



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/345 (23%), Positives = 165/345 (47%), Gaps = 15/345 (4%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV  G+   A  I   ++E G  P    Y  L++ L ++ +  +   L++++    + PD
Sbjct: 424 LVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPD 483

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           + ++  +++    +GN+DEA K+F+   + G  P    YN +IKGY   G  ++++  + 
Sbjct: 484 AFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACIN 543

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + +++ P++ TY+ ++  +  ++ ++ A  +  +MV    +P+ VTY +L   + + 
Sbjct: 544 RMKK-RHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRK 602

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+ +R+ ++  EMQ   + PN  T  I++  +CKE  + DA  F   M   +  PN V F
Sbjct: 603 GDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTF 662

Query: 244 NSLIKGF-------LDIKDSDGVDKALTLMEEF-------GVKPDVVTFSTIMDAWSSAG 289
           N L+ GF       +  K ++  +   ++   F       G  P    +++I+      G
Sbjct: 663 NYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYG 722

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           +     ++ + M   G  PD   F  L  G    G  ++ ++I++
Sbjct: 723 MFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVS 767


>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
 gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
          Length = 888

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 104/430 (24%), Positives = 222/430 (51%), Gaps = 36/430 (8%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           I Y+ ++ A  +         L+ ++E+DG+     ++++M++  + + +  + + +F++
Sbjct: 359 IIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFER 418

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           +K+ G +P+  +Y  LI  Y  +GK  ++L + + M +   +K N++TY++L+  +   +
Sbjct: 419 LKECGFRPSIISYGCLINLYVKIGKVPKALAVSKEM-ESHGIKHNNKTYSMLINGFIHLH 477

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
               A+++   M+ SG+QPD   YN L  A+ + G   RA ++   M+  +++P+ RT  
Sbjct: 478 DFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFR 537

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            I+ G+   G+M+ A+  L  M+     P ++ +N+LI G +     +     L  M   
Sbjct: 538 PIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIA 597

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH------------------ 311
           G+ P+  T++ IM  ++++G +GK  E F  + ++G++ D++                  
Sbjct: 598 GIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSA 657

Query: 312 -----------------VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
                            +++IL  G+ R G+  +A  ++  M++ G+ PN+  FT+ I+ 
Sbjct: 658 LAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINA 717

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C A  MQRA ++ ++M ++G+ PN+KT+ TL+ G+ +   P RA +  + M+  G++P 
Sbjct: 718 CCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPD 777

Query: 415 KSTIQLVADS 424
           ++    +  S
Sbjct: 778 EAAYHCLVTS 787



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 189/388 (48%), Gaps = 7/388 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+ V  GK  +A  +   +   G +    TY+ L+        F +  S+   + K G+
Sbjct: 435 INLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGL 494

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD  ++N ++ A  + GN+D A++IF++MK    +P+  T+  +I+G+   G  + +L 
Sbjct: 495 QPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALD 554

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L LM +     P   TYN L+     K+ +E A +V+ KM  +GI P+  TY  + R Y
Sbjct: 555 TLDLMRR-SGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGY 613

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A  G+  +A +   +++ + ++ +      ++   CK G M+ A+     M   ++  N 
Sbjct: 614 AASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNT 673

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            ++N LI G+    D       +  M+E G+ P++ TF++ ++A   AG M + + +  +
Sbjct: 674 FIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQE 733

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G++P++  F+ L KG+ +   P +A      M+  G+ P+   +  +++   +   
Sbjct: 734 MADVGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLSRAT 793

Query: 361 MQRA------MSIYEKMCEIGINPNLKT 382
           +         +S+  +M E  +  +L+T
Sbjct: 794 VMEGSTYTGILSVCREMFENDLTVDLRT 821



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 158/344 (45%), Gaps = 46/344 (13%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  IF  +I+ G +P    Y  LV A  +       + +  +++K+ M+P +  F  +I 
Sbjct: 482 AFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIE 541

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
             + +G++  A+     M+ SGC PT  TYN LI G     + E ++ +L  MS    + 
Sbjct: 542 GFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSI-AGIA 600

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA------------- 179
           PN+ TY I++R + +   I +A+    K+  SG++ D   Y TL RA             
Sbjct: 601 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 660

Query: 180 ----------------------YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
                                 +A+ G+ + A  ++ +M+ + + PN  T    ++  CK
Sbjct: 661 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCK 720

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD--- 274
            G+M+ A   +  M ++ + PN+  F +LIKG+  +   D   K    M+  G+KPD   
Sbjct: 721 AGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPDEAA 780

Query: 275 -------VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                  +++ +T+M+  +  G++  C+E+F++ +   +   +H
Sbjct: 781 YHCLVTSLLSRATVMEGSTYTGILSVCREMFENDLTVDLRTAVH 824



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 69/318 (21%), Positives = 149/318 (46%), Gaps = 1/318 (0%)

Query: 96  KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
           KP+   +  ++  Y   G    +    + M + + ++PN   +  LV A+     +  A 
Sbjct: 250 KPSRREFGLMVVYYAKRGDKHHARATFENM-RARGIEPNAFVFTSLVHAYAVARDMRGAL 308

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
           + V +M + G++   VTY+ L   Y +  +   A+++  E +      N      I+  +
Sbjct: 309 SCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAH 368

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C+ GNM+ A   +  M+E  +   + V++S++ G+   +D          ++E G +P +
Sbjct: 369 CQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSI 428

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           +++  +++ +   G + K   +  +M   GI+ +   +S+L  G++   +   A SI   
Sbjct: 429 ISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFED 488

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M K G+ P+  ++  ++  +C    M RA+ I+E+M +  + P+ +T+  ++ G+  A  
Sbjct: 489 MIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGD 548

Query: 396 PWRAEELLQVMEEKGVRP 413
             RA + L +M   G  P
Sbjct: 549 MKRALDTLDLMRRSGCAP 566



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/414 (21%), Positives = 185/414 (44%), Gaps = 19/414 (4%)

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           E+G   EA   + K ++  C+       +         +PE+   ++     ++  KP+ 
Sbjct: 205 EAGVAREARSPWHKGREDACREFRRVLES---------RPEDWQAVVSAF--ERIPKPSR 253

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           R + ++V  +  +     A      M A GI+P+A  + +L  AYA   +   A   + E
Sbjct: 254 REFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEE 313

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M++  +     T  I+++GY K  + E A +     K    + N ++++++I       +
Sbjct: 314 MKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGN 373

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D  ++ +  MEE G+   +  + ++M  ++ A    KC  +F+ + + G  P I  +  
Sbjct: 374 MDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGC 433

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L   YV+ G+  KA ++   M  +G+  N   ++ +I+G+ +      A SI+E M + G
Sbjct: 434 LINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSG 493

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           + P+   Y  L+  + +     RA  + + M+++ ++P   T + + + +   G   + K
Sbjct: 494 LQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAG---DMK 550

Query: 436 RVLKSAEEDRQS--MPNKKDEIA-VESIHRKQNLSASNSTF--LQIPGVVSSEH 484
           R L + +  R+S   P      A +  + RK  +  + S    + I G+  +EH
Sbjct: 551 RALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEH 604



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 6/174 (3%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NIL+     +G   EA  +   + E+G  P + T+T+ + A  +    +   ++I ++  
Sbjct: 677 NILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMAD 736

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+KP+   F  +I   ++    D A+K F++MK +G KP  + Y+ L+    +     E
Sbjct: 737 VGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLSRATVME 796

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSK--NSIEEAWNVVYKMVASGIQPD 169
                 ++S  + +  ND T ++      SK  + IE     + + +     PD
Sbjct: 797 GSTYTGILSVCREMFENDLTVDLRTAVHWSKWLHEIERTGGALTEALQRIFPPD 850


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 214/421 (50%), Gaps = 1/421 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  +A  + + ++E G +P  +TY  ++  + +  +    + L+ K+E+  +
Sbjct: 200 VNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K D++ ++ +I+   + G++D A  +F +M+  G K    TYNTLI G+ N G+ ++  K
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK 319

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M + K + PN  T+++L+ ++  +  + EA  ++ +M+  GI P+ +TYN+L   +
Sbjct: 320 LLRDMIKRK-ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A QM+  M +    P+  T  I+++GYCK   ++D +     M    V  N 
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+L++GF      +   K    M    V+PD+V++  ++D     G + K  EIF  
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           + K+ +E DI ++ I+  G   A +   A  +  S+   GV  +   +  +IS  C    
Sbjct: 499 IEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDS 558

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           + +A  ++ KM E G  P+  TY  L+  +        A EL++ M+  G     ST+++
Sbjct: 559 LSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKM 618

Query: 421 V 421
           V
Sbjct: 619 V 619



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 222/440 (50%), Gaps = 1/440 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  +A  +F  +I+    PT+I +  L +A+ + K+++ +L+L  ++E  G+       +
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            MIN       +  A     K+   G +P T  +NTL+ G     +  E+L+L+  M + 
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
            + KP   T N LV   C    + +A  ++ +MV +G QP+ VTY  +     + G+T  
Sbjct: 188 GH-KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A ++L +M+   ++ +     II+ G CK+G++++A      M+      +++ +N+LI 
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           GF +    D   K L  M +  + P+VVTFS ++D++   G + +  ++  +M++ GI P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           +   ++ L  G+ +    ++A  ++  M   G  P+++ F  +I+G+C A ++   + ++
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            +M   G+  N  TY TL+ G+ ++ +   A++L Q M  + VRP   + +++ D     
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486

Query: 429 GLAREAKRVLKSAEEDRQSM 448
           G   +A  +    E+ +  +
Sbjct: 487 GELEKALEIFGKIEKSKMEL 506



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 204/393 (51%), Gaps = 1/393 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G+ P  + + TL+  L  + R    L L+ ++ + G KP  I  N ++N    +G 
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGK 208

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V +A+ +  +M ++G +P   TY  ++      G+   +++LL+ M +++N+K +   Y+
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKYS 267

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           I++   C   S++ A+N+  +M   G + D +TYNTL   +   G      ++L +M   
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           ++ PN  T  +++  + KEG + +A + L  M +  + PN + +NSLI GF      +  
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            + + LM   G  PD++TF+ +++ +  A  +    E+F +M   G+  +   ++ L +G
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           + ++G+ + A+ +   M    V P++V +  ++ G C+  ++++A+ I+ K+ +  +  +
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
           +  Y  ++ G   A +   A +L   +  KGV+
Sbjct: 508 IGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVK 540



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 171/350 (48%), Gaps = 1/350 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G    A  +FN +  +G +  +ITY TL+       R+     L+  + K  + P+
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + F+ +I++  + G + EA ++ ++M   G  P T TYN+LI G+    + EE+++++ 
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           LM   K   P+  T+NIL+  +C  N I++   +  +M   G+  + VTYNTL + + Q 
Sbjct: 393 LMIS-KGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A+++  EM + +VRP+  +  I++ G C  G +E A+    ++++ ++  ++ ++
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
             +I G  +    D        +   GVK D   ++ ++        + K   +F  M +
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
            G  PD   ++IL + ++   +   A  ++  M+  G   +V     VI+
Sbjct: 572 EGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 142/299 (47%), Gaps = 5/299 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            V +GK  EA  +   +++ G  P  ITY +L+    ++ R +  + ++  +   G  PD
Sbjct: 343 FVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPD 402

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + FN +IN   ++  +D+ +++F++M   G    T TYNTL++G+   GK E + KL Q
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   + V+P+  +Y IL+   C    +E+A  +  K+  S ++ D   Y  +       
Sbjct: 463 EMVS-RRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNA 521

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +   A  +   +    V+ + R   I++S  C++ ++  A     +M E    P+ + +
Sbjct: 522 SKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           N LI+  L   D+    + +  M+  G   DV T   +++  SS    G+  + F DM+
Sbjct: 582 NILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS----GELDKSFLDML 636


>gi|145353743|ref|XP_001421164.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581400|gb|ABO99457.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 683

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 216/434 (49%), Gaps = 40/434 (9%)

Query: 19  CLIEEGHRPTLITYTTLVAALTRQKRFKSILS-LISKVEKDGMKPDSILFNAMINACSES 77
            LI +GHRPT  T+T +++ L    R K  L  ++  +E+ G   D  ++NA+ +A    
Sbjct: 139 ALIRDGHRPTAKTFTAVISTLGAMGRAKEALDDVLPMIEEYGDDVDVAVWNAVAHAFCAG 198

Query: 78  GNVDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
           G+   A KI  +M  + G     +T+  +I  Y   G+     +L++ MS +  + P++R
Sbjct: 199 GDPAGAEKIVDRMVGEDGVGVNGATHPEIIYTYAKRGEANRVYRLIRRMSSEHGIIPDER 258

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
            YN  +R  C ++ +E+A  V+ +                          +  E+   E 
Sbjct: 259 AYNAFLRGLCERDDLEDAEEVLRR--------------------------WNNEKFDLER 292

Query: 197 QNNQ----VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL- 251
           Q+++     +P+  + G+++  + + GNM  A + L +M+   + P+L +FN LI G+L 
Sbjct: 293 QSDRGGRVSKPSAASYGLLIDAWTRRGNMLAARKLLQQMQWERIAPSLPLFNMLIDGYLK 352

Query: 252 --DIKDSDGVDKALTL-----MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
             +++ ++G+ + L       ME  G+KPD VT++  +D W++ G +  C+ IF+ M + 
Sbjct: 353 QENMRAAEGLFRELESSGTWDMESLGIKPDNVTYTLFLDYWANQGQVDACERIFNRMHRK 412

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
            + PD+  +  L K Y RA +   AE++L  + +  V P+V +++ V++  C    M RA
Sbjct: 413 EVAPDVTAYGTLVKAYARARDSDGAEAVLDRLAEAKVAPSVAIYSAVVAAHCTIGNMSRA 472

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             + E+M + G+ PN +T+    WGYG+ +      E+ ++M   G++ K +    +  +
Sbjct: 473 RDVLERMFDAGLRPNERTFAHFAWGYGQLEDINGIAEVAKLMLASGLKLKGANRTAIVRA 532

Query: 425 WRAIGLAREAKRVL 438
               G++  A + L
Sbjct: 533 CEECGMSMSAVQAL 546



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/178 (19%), Positives = 80/178 (44%), Gaps = 1/178 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +P  +TYT  +     Q +  +   + +++ +  + PD   +  ++ A + + + D A
Sbjct: 378 GIKPDNVTYTLFLDYWANQGQVDACERIFNRMHRKEVAPDVTAYGTLVKAYARARDSDGA 437

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
             +  ++ ++   P+ + Y+ ++  +  +G    +  +L+ M  D  ++PN+RT+     
Sbjct: 438 EAVLDRLAEAKVAPSVAIYSAVVAAHCTIGNMSRARDVLERMF-DAGLRPNERTFAHFAW 496

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
            +     I     V   M+ASG++        + RA  + G +  A Q L +  N ++
Sbjct: 497 GYGQLEDINGIAEVAKLMLASGLKLKGANRTAIVRACEECGMSMSAVQALLDRINPEM 554



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/112 (22%), Positives = 53/112 (47%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++    +G+      IFN +  +   P +  Y TLV A  R +      +++ ++ +  +
Sbjct: 390 LDYWANQGQVDACERIFNRMHRKEVAPDVTAYGTLVKAYARARDSDGAEAVLDRLAEAKV 449

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNV 112
            P   +++A++ A    GN+  A  + ++M D+G +P   T+     GYG +
Sbjct: 450 APSVAIYSAVVAAHCTIGNMSRARDVLERMFDAGLRPNERTFAHFAWGYGQL 501


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 213/429 (49%), Gaps = 2/429 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++LV  G+  EA +I + L+  G + +++  TTL+     Q+  +  L +  +  +DG+
Sbjct: 254 VDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGL 313

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + +  +I  C+E G  ++A ++ ++M+D G  P+T+ +N +IKG  N    ++++ 
Sbjct: 314 VPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVS 373

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M+ D  + P+  TYNIL+   C +  I EA N+  KM  +G++P  VTY++L   Y
Sbjct: 374 LFKEMA-DSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCY 431

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A ++  EM      PN  T   ++ G+  +   + A   L  MK+  V  N 
Sbjct: 432 CVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCND 491

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +N+LI G   +     V + L   E  G  P  +T+++I++ +  AG+MG    ++  
Sbjct: 492 YTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQ 551

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   GI P+I  ++    GY +      A  +L  +R  G+ P++  + ++I G+C    
Sbjct: 552 MCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGN 611

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M  A+ +   M + G+ PN+  Y + + GY   K    A  L + M ++G+    +T   
Sbjct: 612 MSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTT 671

Query: 421 VADSWRAIG 429
           + D +   G
Sbjct: 672 LIDGFSKDG 680



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 201/399 (50%), Gaps = 42/399 (10%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   TY  L+  L ++++ +  L+L  K+ + G+KP  + +++++     +G +DEA+K+
Sbjct: 384 PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKL 443

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           + +M   G  P   TY TL+KG+ N    +++  LL  M Q+  V  ND TYN L+   C
Sbjct: 444 YTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQN-GVSCNDYTYNTLINGLC 502

Query: 147 -------------------------SKNSI----------EEAWNVVYKMVASGIQPDAV 171
                                    + NSI            A+ V  +M A GI P+ V
Sbjct: 503 VVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIV 562

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
           TY +    Y +      A +ML +++   +RP+      ++ G+C+EGNM  A++ L  M
Sbjct: 563 TYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLM 622

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSA 288
            +  + PN+ V+NS I G+ ++K    +++AL L E+    G+  D  T++T++D +S  
Sbjct: 623 LKDGLLPNISVYNSFITGYKNLK---MMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKD 679

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
           G +    +++ +MV  G  PD   F+ L  G  R G+   A  +L  M +  + PNV+M+
Sbjct: 680 GNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMY 739

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
             +I+G+    K+Q A  ++++M E  I P+  TY+ L+
Sbjct: 740 NMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/416 (23%), Positives = 196/416 (47%), Gaps = 2/416 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           + G  P   T+ ++V  L +  R +  L +  ++   G K   +L   +++       V 
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +A+ IF++    G  PT  TY  LI+G    G PE++ +L + M +D  + P+   +N++
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQM-RDHGLLPSTNEFNMV 358

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           ++   +    ++A ++  +M  SGI PDA TYN L     Q  +   A  +  +M    V
Sbjct: 359 IKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGV 417

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           +P   T   ++  YC  G M++A++    M      PN+V + +L+KG ++    D    
Sbjct: 418 KPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYA 477

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            L  M++ GV  +  T++T+++     G + +  E+       G  P    ++ +  G++
Sbjct: 478 LLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFI 537

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           +AG    A ++   M   G+ PN+V +T+ I G+C       A+ +   +   G+ P++ 
Sbjct: 538 KAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIA 597

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
            Y +L++G+ +      A ++L +M + G+ P  S        ++ + +  EA R+
Sbjct: 598 AYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRL 653



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 111/460 (24%), Positives = 198/460 (43%), Gaps = 72/460 (15%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P   + T L+A   R       L+L++++   G   D+ +F+ ++ AC + G  D+A
Sbjct: 137 GVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGMYDDA 196

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +++F +M  S  +P     +  I     +     +L +L+ M QD    P D T+N +V 
Sbjct: 197 VRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKM-QDAGFVPWDFTFNSVVD 255

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
                  +EEA ++  +++A+G +   V   TL   Y    E  +A  +  E   + + P
Sbjct: 256 VLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVP 315

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK--------- 254
            + T  +++ G  +EG  E A     +M++  + P+   FN +IKG L+ K         
Sbjct: 316 TDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLF 375

Query: 255 ----DSDGVDKALTL----------------------MEEFGVKPDVVTFSTIMDAWSSA 288
               DS G+  A T                       M E GVKP +VT+ +++  +   
Sbjct: 376 KEMADS-GIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVN 434

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
           G M +  +++ +M   G  P++  ++ L KG++      KA ++L  M++ GV  N   +
Sbjct: 435 GCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTY 494

Query: 349 TTVISGWC-----------------------------------NAVKMQRAMSIYEKMCE 373
            T+I+G C                                    A  M  A ++Y++MC 
Sbjct: 495 NTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCA 554

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            GI PN+ TY + + GY +      A ++L  +  KG+RP
Sbjct: 555 KGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRP 594



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 126/289 (43%), Gaps = 38/289 (13%)

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC-KEG 219
           M A G+ PDA +   L    A+      A  +L EM+  + RP +     +V   C KEG
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRG-KGRPLDAWMFDVVMRACFKEG 191

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
             +DA+R    M   E+ P+  V +  I     ++D++     L  M++ G  P   TF+
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 280 TIMDAWSSAGLM---------------------------GKC--------QEIFDDMVKA 304
           +++D     G M                           G C         +IF++ ++ 
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+ P    +++L +G    G P+KA  +   MR +G+ P+   F  VI G  N    + A
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           +S++++M + GI P+  TY  L+    + ++   A  L + M E GV+P
Sbjct: 372 VSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKP 419



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 35/183 (19%)

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           D   F  +M A    G+      +FD+M  + IEPD  V S+      +  +  +A  +L
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235

Query: 334 TSMRKYGVHP-----------------------------------NVVMFTTVISGWCNA 358
             M+  G  P                                   +VV+ TT++ G+C  
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQ 295

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            ++++A+ I+E+    G+ P   TY  L+ G  E   P +A EL + M + G+ P  +  
Sbjct: 296 REVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEF 355

Query: 419 QLV 421
            +V
Sbjct: 356 NMV 358


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 225/425 (52%), Gaps = 1/425 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG  H+A    + ++ +G     ++Y TL+  L +  R  + L L+ +V+   ++P++++
Sbjct: 153 KGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVM 212

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I+   ++  V++A  ++ +M      P   T N+LI G+  +G+ +E++ LL  M 
Sbjct: 213 YNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMI 272

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            + N+ P   T++ILV A+C +  ++EA  ++   +   I  D VTYN+L   Y    E 
Sbjct: 273 LE-NINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEI 331

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A+ +   M +  V  N ++   +++G CK   +++A+     M+  ++ PN+V +NSL
Sbjct: 332 NKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSL 391

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G   +     V K +  M + G  P+++T+++I+DA      + K   +  ++   GI
Sbjct: 392 IDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGI 451

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD++ +++L KG  ++G+ + A+ +   +   G + +V  +T +I G+C       A++
Sbjct: 452 RPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALA 511

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           +  KM + G  PN KTYE ++    E  +   AE+LL+ M  +G+  +KS I L +    
Sbjct: 512 LLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLLDEKSYIYLASKETG 571

Query: 427 AIGLA 431
            +G+ 
Sbjct: 572 VMGMG 576



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 218/480 (45%), Gaps = 72/480 (15%)

Query: 17  FNCLIEEGH-RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           FN L+   +  P +I +  ++++L + K   + LSL  ++E +G+  D   FN +IN  S
Sbjct: 57  FNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFS 116

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG--------------------------- 108
           + G    +  +F K+   G  P   T+NTLIKG                           
Sbjct: 117 QLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQV 176

Query: 109 -YGN-------VGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
            YG        VG+   +L+LL+ +   K V+PN   YN+++   C    + +A+++  +
Sbjct: 177 SYGTLINGLCKVGRITAALQLLKRV-DGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQ 235

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           MVA  I PD  T N+L   +   G+   A  +L +M    + P   T  I+V  +CKEG 
Sbjct: 236 MVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGK 295

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFL---------DIKDSDG------------- 258
           +++A   L    + ++  ++V +NSL+ G+          DI DS               
Sbjct: 296 VKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTT 355

Query: 259 ----------VDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
                     VD+A+ L EE   +   P+VVT+++++D     G +    ++ D+M   G
Sbjct: 356 MINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRG 415

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
             P+I  ++ +     +     KA ++LT+++  G+ P++  +T +I G C + K++ A 
Sbjct: 416 QPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQ 475

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            ++E +   G N ++ TY  ++ G+        A  LL  ME+ G  P   T ++V  S 
Sbjct: 476 KVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSL 535



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 96/236 (40%), Gaps = 35/236 (14%)

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P ++ FN ++   +  K           ME  G+  D  TF+ +++ +S  GL      +
Sbjct: 68  PPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSV 127

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC- 356
           F  ++K G +P+   F+ L KG    G   +A +    +   G H + V + T+I+G C 
Sbjct: 128 FGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCK 187

Query: 357 ---------------------NAVK-------------MQRAMSIYEKMCEIGINPNLKT 382
                                NAV              +  A  +Y +M    I+P+  T
Sbjct: 188 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFT 247

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             +L++G+    Q   A  LL  M  + + P+  T  ++ D++   G  +EAK +L
Sbjct: 248 CNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMML 303



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 77/171 (45%)

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           +L+      P ++ F+ I+ +   A        +   M   GI  D   F+IL   + + 
Sbjct: 59  SLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQL 118

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G    + S+   + K G  PN + F T+I G C    + +A++ ++K+   G + +  +Y
Sbjct: 119 GLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSY 178

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
            TL+ G  +  +   A +LL+ ++ K V+P      ++ D+     L  +A
Sbjct: 179 GTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDA 229



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 47/91 (51%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK  +A  +F  L+ +G+   + TYT ++     +  F + L+L+SK+E +G  P+
Sbjct: 465 LCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPN 524

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           +  +  +I +  E    D A K+ ++M   G
Sbjct: 525 AKTYEIVILSLFEKDENDMAEKLLREMIARG 555


>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 924

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 215/430 (50%), Gaps = 42/430 (9%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           I Y  ++ A  +        +L+ ++E +G+     +++ M++  +  GN ++ + +F++
Sbjct: 412 IIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFER 471

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           +K+ G  P+  +Y  LI  Y  VGK  ++L++ ++M +   +K N +TY++L+  +    
Sbjct: 472 LKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMM-ESAGIKHNMKTYSMLINGFLKLK 530

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
               A+ +   +V  G++PD V YN + RA+   G   RA  M+ EMQ  + RP  RT  
Sbjct: 531 DWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFM 590

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            I+ G+ + G M+ A+     M+     P +  FN+LI G ++ +    ++KA+ +++E 
Sbjct: 591 PIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQ---MEKAIEILDEM 647

Query: 270 ---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH--------------- 311
              GV P+  T++TIM  +++ G  GK  E F  +   G++ D++               
Sbjct: 648 ALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRM 707

Query: 312 --------------------VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
                               V++IL  G+ R G+  +A  ++  M++ GV P++  +T+ 
Sbjct: 708 QSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSF 767

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I+  C A  M RA  + E+M   G+ PN+KTY TL+ G+  A  P +A    Q M+  G+
Sbjct: 768 INACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGL 827

Query: 412 RPKKSTIQLV 421
           +P K+    +
Sbjct: 828 KPDKAVYHCL 837



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 198/388 (51%), Gaps = 7/388 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+    GK  +A  +   +   G +  + TY+ L+    + K + +  ++   V KDG+
Sbjct: 488 INLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGL 547

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD +L+N +I A    G +D A+ + ++M+    +PT+ T+  +I G+   G+ + +L 
Sbjct: 548 KPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALD 607

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +  +M +   + P   T+N L+     K  +E+A  ++ +M  +G+ P+  TY T+   Y
Sbjct: 608 VFDMMRRSGCI-PTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGY 666

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A  G+T +A +   ++++  ++ +  T   ++   CK G M+ A+     M    +  N 
Sbjct: 667 AALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNT 726

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            V+N LI G+    D       +  M++ GVKPD+ T+++ ++A   AG M +  ++ ++
Sbjct: 727 FVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEE 786

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M  +G++P++  ++ L  G+ RA  P+KA      M+  G+ P+  ++  +++   +   
Sbjct: 787 METSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKPDKAVYHCLMTALLSRAT 846

Query: 361 MQRA------MSIYEKMCEIGINPNLKT 382
           +  A      +SI ++M E G+  ++ T
Sbjct: 847 VTEAYVRPGILSICKEMIESGLIVDMGT 874



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 93/390 (23%), Positives = 189/390 (48%), Gaps = 7/390 (1%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P+   Y  +V+   R+            +   G++P S ++ ++I+A +   +++EA+ 
Sbjct: 303 KPSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALS 362

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
             +KMK+ G + +  TY+ ++ G+  +G  + + +  +  ++D++   N   Y  ++ A+
Sbjct: 363 CARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFK-EAKDRHSHMNAIIYGNMIYAY 421

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C   ++++A  +V +M   GI      Y+T+   Y   G   +   +   ++     P+ 
Sbjct: 422 CQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSV 481

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            + G +++ Y K G +  A+     M+   +  N+  ++ LI GFL +KD      A  +
Sbjct: 482 VSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKD---WANAFAI 538

Query: 266 MEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
            E+    G+KPDVV ++ I+ A+   G M +   +  +M K    P    F  +  G+ R
Sbjct: 539 FEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFAR 598

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           AGE ++A  +   MR+ G  P V  F  +I G     +M++A+ I ++M   G++PN  T
Sbjct: 599 AGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHT 658

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
           Y T++ GY       +A E    + ++G++
Sbjct: 659 YTTIMHGYAALGDTGKAFEYFTKLRDEGLQ 688



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/446 (22%), Positives = 202/446 (45%), Gaps = 36/446 (8%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  H A   F  +   G  PT   YT+L+ A    +  +  LS   K++++G++   + 
Sbjct: 319 RGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVT 378

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ ++   ++ GN D A + F++ KD         Y  +I  Y      +++  L++ M 
Sbjct: 379 YSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREME 438

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +    P D  Y+ ++  +    + E+   V  ++   G  P  V+Y  L   YA+ G+ 
Sbjct: 439 GEGIDAPID-IYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKI 497

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A ++   M++  ++ N +T  ++++G+ K  +  +A      + +  + P++V++N++
Sbjct: 498 SKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNI 557

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I+ F  +   D     +  M++   +P   TF  I+  ++ AG M +  ++FD M ++G 
Sbjct: 558 IRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGC 617

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW----------- 355
            P +H F+ L  G V   + +KA  IL  M   GV PN   +TT++ G+           
Sbjct: 618 IPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFE 677

Query: 356 ------------------------CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
                                   C + +MQ A+++ ++M    I  N   Y  L+ G+ 
Sbjct: 678 YFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWA 737

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKST 417
                W A +L+Q M++ GV+P   T
Sbjct: 738 RRGDVWEAADLMQQMKQGGVKPDIHT 763



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/386 (20%), Positives = 171/386 (44%), Gaps = 40/386 (10%)

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
           N  + +  F+++K    KP+   Y  ++  Y   G    + +  + M + + ++P    Y
Sbjct: 290 NWQDVVSAFERIK----KPSRREYGLMVSYYARRGDMHRARQTFESM-RARGIEPTSHVY 344

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
             L+ A+     +EEA +   KM   G++   VTY+ +   +A+ G    A++   E ++
Sbjct: 345 TSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKD 404

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
                N    G ++  YC+  NM+ A   +  M+   +   + ++++++ G+  + + + 
Sbjct: 405 RHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEK 464

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE---------------------- 296
                  ++E G  P VV++  +++ ++  G + K  E                      
Sbjct: 465 CLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLIN 524

Query: 297 -------------IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
                        IF+D+VK G++PD+ +++ + + +   G   +A  ++  M+K    P
Sbjct: 525 GFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRP 584

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
               F  +I G+  A +M+RA+ +++ M   G  P + T+  L+ G  E +Q  +A E+L
Sbjct: 585 TSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEIL 644

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIG 429
             M   GV P + T   +   + A+G
Sbjct: 645 DEMALAGVSPNEHTYTTIMHGYAALG 670



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/294 (21%), Positives = 134/294 (45%)

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           E W  V        +P    Y  +   YA+ G+ +RA Q    M+   + P       ++
Sbjct: 289 ENWQDVVSAFERIKKPSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLI 348

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
             Y    +ME+A+    +MKE  V  +LV ++ ++ GF  I ++D  D+     ++    
Sbjct: 349 HAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSH 408

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            + + +  ++ A+     M + + +  +M   GI+  I ++  +  GY   G  +K  ++
Sbjct: 409 MNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTV 468

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              +++ G  P+VV +  +I+ +    K+ +A+ + + M   GI  N+KTY  L+ G+ +
Sbjct: 469 FERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLK 528

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
            K    A  + + + + G++P       +  ++  +G    A  ++K  +++R 
Sbjct: 529 LKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERH 582


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 234/485 (48%), Gaps = 47/485 (9%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTR----------------------- 41
           + +GKPH A  IF  +I    +P L+T  TL+  L R                       
Sbjct: 142 LHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVS 201

Query: 42  ---------------QKRFKSILSLISK-VEKDGMKPDSILFNAMINACSESGNVDEAMK 85
                          + + +  L ++ + V +  + PD++ +N ++ A S+ G + +  +
Sbjct: 202 LNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKE 261

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +   MK +G  P   TYN L+ GY  +G  +E+ ++++LM Q  NV P+  TYNIL+   
Sbjct: 262 LLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ-TNVLPDLCTYNILINGL 320

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C+  S+ E   ++  M +  +QPD VTYNTL     + G +  A +++ +M+N+ V+ N+
Sbjct: 321 CNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQ 380

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKEL-EVH---PNLVVFNSLIKGFLDIKDSDGVDK 261
            T  I +   CKE   E   R   ++KEL ++H   P++V +++LIK +L + D  G  +
Sbjct: 381 VTHNISLKWLCKEEKREAVTR---KVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALE 437

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            +  M + G+K + +T +TI+DA      + +   + +   K G   D   +  L  G+ 
Sbjct: 438 MMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFF 497

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           R  + +KA  +   M+K  + P V  F ++I G C+  K + AM  ++++ E G+ P+  
Sbjct: 498 REEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDS 557

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           T+ +++ GY +  +  +A E      +   +P   T  ++ +     G+  +A     + 
Sbjct: 558 TFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL 617

Query: 442 EEDRQ 446
            E+R+
Sbjct: 618 IEERE 622



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 204/437 (46%), Gaps = 9/437 (2%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG+  +   +   + + G  P  +TY  LV    +    K    ++  +++  + PD   
Sbjct: 253 KGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCT 312

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +IN    +G++ E +++   MK    +P   TYNTLI G   +G   E+ KL++ M 
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV-ASGIQPDAVTYNTLARAYAQYGE 185
            D  VK N  T+NI ++  C +   E     V ++V   G  PD VTY+TL +AY + G+
Sbjct: 373 ND-GVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A +M+ EM    ++ N  T   I+   CKE  +++A   L    +     + V + +
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGT 491

Query: 246 LIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           LI GF      + V+KAL +   M++  + P V TF++++      G      E FD++ 
Sbjct: 492 LIMGFF---REEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           ++G+ PD   F+ +  GY + G  +KA        K+   P+      +++G C     +
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE 608

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
           +A++ +  + E     +  TY T++  + + K+   A +LL  MEEKG+ P + T     
Sbjct: 609 KALNFFNTLIE-EREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFI 667

Query: 423 DSWRAIGLAREAKRVLK 439
                 G   E   +LK
Sbjct: 668 SLLMEDGKLSETDELLK 684



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 113/231 (48%), Gaps = 2/231 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  + K  EAH + N   + G     +TY TL+    R+++ +  L +  +++K  +
Sbjct: 458 LDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKI 517

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P    FN++I      G  + AM+ F ++ +SG  P  ST+N++I GY   G+ E++ +
Sbjct: 518 TPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFE 577

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
                S   + KP++ T NIL+   C +   E+A N    ++    + D VTYNT+  A+
Sbjct: 578 FYN-ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAF 635

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
            +  +   A  +L EM+   + P+  T    +S   ++G + +    L + 
Sbjct: 636 CKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/193 (20%), Positives = 74/193 (38%), Gaps = 39/193 (20%)

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ------------------ 327
           +S   +  C  +    +     P   +F I    Y+  G+P                   
Sbjct: 107 TSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNL 166

Query: 328 --------------------KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
                                A  +   M K GV  NV  F  +++G+C   K++ A+ +
Sbjct: 167 LTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGM 226

Query: 368 YEKMC-EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
            E+M  E  +NP+  TY T+L    +  +    +ELL  M++ G+ P + T   +   + 
Sbjct: 227 LERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYC 286

Query: 427 AIGLAREAKRVLK 439
            +G  +EA ++++
Sbjct: 287 KLGSLKEAFQIVE 299


>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
          Length = 793

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 128/516 (24%), Positives = 228/516 (44%), Gaps = 75/516 (14%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A   F  L   GH P ++TY  L+    +   +   L ++ ++E  G +PD++ +
Sbjct: 265 GLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTY 324

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +    + +G  +EA K    M   G  P T TYNT++  Y NVG+ +E+L L   M +
Sbjct: 325 NELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKK 384

Query: 128 DKNVKPNDRTYNILV--------------------RAWCSKNSIEEAWNVV--------- 158
           +  V PN  TYN++                     R+ C+ N +   WN +         
Sbjct: 385 NGYV-PNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRV--TWNTMLAVCGKRGM 441

Query: 159 ---------------------------------------YKM----VASGIQPDAVTYNT 175
                                                  +KM    ++SG  P   TYN 
Sbjct: 442 EDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNA 501

Query: 176 LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
           L    ++ G+   A+ ++ +M  N  +PN+++  +++  Y K GN          +    
Sbjct: 502 LLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGT 561

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           + P+ V+  +L+      +  +GV+KA   ++  G KPD+V F++++  ++  GL  K  
Sbjct: 562 IFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKAT 621

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           E+FD + ++G+ PD+  ++ L   Y ++ E  +AE IL  ++   V P+VV + TVI+G+
Sbjct: 622 EMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGF 681

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C    ++ A  I  +M   G+ P + TY TL+ GY   +    A E++  M    ++P +
Sbjct: 682 CKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPME 741

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
            T + V DS+       EA+  L    +  Q+   K
Sbjct: 742 LTYRRVVDSYCKAKRYDEAREFLSEISDTDQNFDQK 777



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 209/459 (45%), Gaps = 42/459 (9%)

Query: 20  LIEE----GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           L+EE    G  P   T +T++AA  R       ++    ++  G  P  + +NA++    
Sbjct: 238 LLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFG 297

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           ++GN  EA+++ ++M+DSGC+P   TYN L   Y   G  EE+ K L  M+  K + PN 
Sbjct: 298 KAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTS-KGLLPNT 356

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TYN ++ A+ +   ++EA  +  +M  +G  P+  TYN +     +        +ML E
Sbjct: 357 FTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEE 416

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMED-AMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           M  +   PN  T   +++  C +  MED   R L  MK   V  +   +N+LI  +    
Sbjct: 417 MSRSGCTPNRVTWNTMLA-VCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCG 475

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
                 K    M   G  P + T++ +++  S  G     Q I   M+K G +P+   +S
Sbjct: 476 SRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYS 535

Query: 315 ILAKGYVRAGEPQKAESI-----------------------------------LTSMRKY 339
           +L + Y + G     ESI                                      ++  
Sbjct: 536 LLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQ 595

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
           G  P++V+F ++++ +       +A  +++ + + G++P+L TY +L+  Y ++ + W A
Sbjct: 596 GYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEA 655

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           E++L+ ++   V+P   +   V + +   GL +EA+R+L
Sbjct: 656 EKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRIL 694



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 115/476 (24%), Positives = 213/476 (44%), Gaps = 39/476 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDG 59
           ++ L   G+   A  +F  L  +G  PT++TY  ++    R  R +  I++L+ ++   G
Sbjct: 187 LHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAG 246

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           ++PD    + +I AC   G +D+A+  F+ +K  G  P   TYN L++ +G  G   E+L
Sbjct: 247 VEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEAL 306

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           ++L+ M +D   +P+  TYN L   +      EEA   +  M + G+ P+  TYNT+  A
Sbjct: 307 RVLKEM-EDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTA 365

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           YA  G    A  +   M+ N   PN  T  +I     K+      +  L  M      PN
Sbjct: 366 YANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPN 425

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            V +N+++         D V + L  M+  GV+    T++T++ A+   G      +++D
Sbjct: 426 RVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYD 485

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN--------------- 344
           +M+ +G  P +  ++ L     R G+   A+SI++ M K G  PN               
Sbjct: 486 EMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGG 545

Query: 345 ---------------------VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
                                V++ T VI+ +    +++     ++++   G  P+L  +
Sbjct: 546 NAAGIESIEKEVYVGTIFPSWVILRTLVIANF-KCRRLEGVEKAFQEVKAQGYKPDLVIF 604

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            ++L  Y +     +A E+   +++ G+ P   T   + D +     + EA+++LK
Sbjct: 605 NSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILK 660



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/421 (22%), Positives = 183/421 (43%), Gaps = 36/421 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M      G+  EA  +F+ + + G+ P + TY  +   L ++ RF ++L ++ ++ + G 
Sbjct: 363 MTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGC 422

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +N M+  C + G  D   ++   MK  G + +  TYNTLI  YG  G    + K
Sbjct: 423 TPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFK 482

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M       P   TYN L+     +     A ++V KM+ +G +P+  +Y+ L + Y
Sbjct: 483 MYDEMIS-SGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCY 541

Query: 181 AQYG----------ETYRA-------------------------EQMLFEMQNNQVRPNE 205
           A+ G          E Y                           E+   E++    +P+ 
Sbjct: 542 AKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDL 601

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
                +++ Y K G    A      +K+  + P+L+ +NSL+  +    +S   +K L  
Sbjct: 602 VIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQ 661

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           ++   VKPDVV+++T+++ +   GL+ + Q I  +M+  G+ P +  +  L  GY     
Sbjct: 662 LKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEM 721

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A  ++  M  + + P  + +  V+  +C A +   A     ++ +   N + K    
Sbjct: 722 FNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISDTDQNFDQKLQHM 781

Query: 386 L 386
           L
Sbjct: 782 L 782



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 171/398 (42%), Gaps = 42/398 (10%)

Query: 35  LVAALTRQKRFKSILSLISKVE-KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS 93
           +V AL R+ +   +  L+ ++    G + D   +  +++A S +G  + A+++F +++  
Sbjct: 150 VVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQ 209

Query: 94  GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR----------------- 136
           G  PT  TYN ++  YG +G+    +  L    +   V+P+D                  
Sbjct: 210 GVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQ 269

Query: 137 ------------------TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
                             TYN L++ +    +  EA  V+ +M  SG QPDAVTYN LA 
Sbjct: 270 AVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAG 329

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            YA+ G    A + L  M +  + PN  T   +++ Y   G +++A+    RMK+    P
Sbjct: 330 TYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVP 389

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           N+  +N LI G L  K        L ++EE    G  P+ VT++T++      G+     
Sbjct: 390 NVNTYN-LIFGMLGKKSR--FTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVT 446

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
            + + M   G+E     ++ L   Y R G    A  +   M   G  P +  +  +++  
Sbjct: 447 RVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVL 506

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
                   A SI  KM + G  PN ++Y  LL  Y + 
Sbjct: 507 SRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKG 544


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 206/417 (49%), Gaps = 14/417 (3%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           FN +      PTL TYT LV  L +  + +    +  ++ + G KPD I ++++I+  S+
Sbjct: 186 FNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSK 245

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
           +G VDEA K+   M   G  PT   Y +++ G    G+ +E++K +Q M + +     D 
Sbjct: 246 AGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVD- 304

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           TY+ +V  +     +E+A+ V+ +M      PD ++Y     A    G    AE++   M
Sbjct: 305 TYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETM 364

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
                +P+  T GII+  +CKEG+M  A   L  M +  V PN  ++  ++ GF+    S
Sbjct: 365 VEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFV---KS 421

Query: 257 DGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM--VKAGIEPDIH 311
             +++AL L +     G+ P  VT++T+++A      M +  E+  +M   K  +EP I 
Sbjct: 422 SRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIV 481

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            +S++  G  + G  ++A  +L  M   GV P+   +T++I     A K+ RAM + E+M
Sbjct: 482 TYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEM 541

Query: 372 CEIGINPNLKTYETL--LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
            + GI P+  TY TL  +    +    W   +LLQ M   G  P + T + V   +R
Sbjct: 542 LKAGIFPDDHTYGTLVQILCRSDVDAAW---DLLQEMMRNGHTPNEFTFKAVEKGFR 595



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 190/380 (50%), Gaps = 10/380 (2%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  +I +G++P +I Y++L+  L++  R      L+  +   G  P ++ + +++    
Sbjct: 220 VFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLC 279

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G + EA+K  Q+M+    +P   TY+ ++ GY  +GK E++  +++ M+ D++  P+ 
Sbjct: 280 KCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMA-DRDCAPDT 338

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            +Y + + A  S    EEA  V   MV  G +PD  TY  +   + + G    A  +L  
Sbjct: 339 ISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRL 398

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M    V+PN     +I+ G+ K   +E+A+    R+ +  + P+ V +N++I     +K 
Sbjct: 399 MDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKK 458

Query: 256 SDGVDKALTLMEEFG-----VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
              +D+AL L+ E       ++P +VT+S I+      G+  +  ++  +M+  G+ PD 
Sbjct: 459 ---MDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDC 515

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             ++ L +    AG+  +A  +L  M K G+ P+   + T++   C +  +  A  + ++
Sbjct: 516 FTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQE 574

Query: 371 MCEIGINPNLKTYETLLWGY 390
           M   G  PN  T++ +  G+
Sbjct: 575 MMRNGHTPNEFTFKAVEKGF 594



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 206/439 (46%), Gaps = 13/439 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV  G   +A   F   I E   P + ++  L+     +  F+ + +L+ +++  G+  +
Sbjct: 106 LVRGGHLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSN 162

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
                 +++A     ++D+A+  F  +  + C+PT  TY  L+ G     K E +  + +
Sbjct: 163 GATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFE 222

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + K  KP+   Y+ L+        ++EA  +V  MVA G  P AV Y ++     + 
Sbjct: 223 EMIR-KGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKC 281

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A + + EM+  ++RP   T   IV+GY   G +E A   +  M + +  P+ + +
Sbjct: 282 GRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISY 341

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
              I+    I   +  +K    M E G KPD+ T+  I+D +   G M     +   M K
Sbjct: 342 TMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDK 401

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           A ++P+ ++++++  G+V++   ++A  +   + K G+ P+ V + TVI+  C   KM  
Sbjct: 402 AAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDE 461

Query: 364 AMSIYEKMCEIG--INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK----KST 417
           A+ +  +M      + P++ TY  ++ G G+     RA +LL  M + GV P      S 
Sbjct: 462 ALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSL 521

Query: 418 IQLVADSW---RAIGLARE 433
           IQ +A +    RA+ L  E
Sbjct: 522 IQTLAGAGKVSRAMELLEE 540



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/420 (22%), Positives = 202/420 (48%), Gaps = 12/420 (2%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G   TL T  +L+ AL R       L      +    +P+   FN ++   +   + +  
Sbjct: 91  GFSHTLFTRNSLLLALVRGGHLSDALGFF---QSSISEPNVSSFNILLRGFAARDDFEVV 147

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
             + ++MK  G     +T+  ++         ++++     +S +K  +P   TY +LV 
Sbjct: 148 NALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNK-CEPTLFTYTVLVD 206

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C  + +E A +V  +M+  G +PD + Y++L    ++ G    A +++  M      P
Sbjct: 207 GLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPP 266

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
                  IV+G CK G +++A++ +  M+   + P +  ++ ++ G++ +     V+KA 
Sbjct: 267 TAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGK---VEKAF 323

Query: 264 TLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
            +MEE   +   PD ++++  ++A  S G   + +++F+ MV+ G +PD+H + I+   +
Sbjct: 324 AVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNF 383

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            + G    A  +L  M K  V PN  ++T ++ G+  + +++ A+ +Y+++ + GI P+ 
Sbjct: 384 CKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPST 443

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKG--VRPKKSTIQLVADSWRAIGLAREAKRVL 438
            TY T++    + K+   A ELL+ M+ +   + P   T  ++      +G+   A  +L
Sbjct: 444 VTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLL 503



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 176/350 (50%), Gaps = 4/350 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  + + ++  G  PT + YT++VA L +  R +  +  I ++ +  ++P    +
Sbjct: 247 GRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTY 306

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + ++      G V++A  + ++M D  C P T +Y   I+   ++G+ EE+ K+ + M +
Sbjct: 307 SFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVE 366

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K  KP+  TY I++  +C + S+  A +V+  M  + ++P+   Y  +   + +     
Sbjct: 367 -KGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLE 425

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM--KELEVHPNLVVFNS 245
            A ++   +  + + P+  T   +++  CK   M++A+  L  M  ++ E+ P++V ++ 
Sbjct: 426 EALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSM 485

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           +I G   +   +     L  M + GV PD  T+++++   + AG + +  E+ ++M+KAG
Sbjct: 486 IIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAG 545

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           I PD H +  L +   R+ +   A  +L  M + G  PN   F  V  G+
Sbjct: 546 IFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPNEFTFKAVEKGF 594



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/350 (21%), Positives = 153/350 (43%), Gaps = 8/350 (2%)

Query: 94  GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
           G   T  T N+L+      G   ++L   Q        +PN  ++NIL+R + +++  E 
Sbjct: 91  GFSHTLFTRNSLLLALVRGGHLSDALGFFQ----SSISEPNVSSFNILLRGFAARDDFEV 146

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
              ++ +M + GI  +  T+  +  A     +  +A      +  N+  P   T  ++V 
Sbjct: 147 VNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVD 206

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
           G CK   +E A      M      P+++ ++SLI G       D   K + LM   G  P
Sbjct: 207 GLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPP 266

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
             V +++I+      G + +  +   +M +  + P +  +S +  GY+  G+ +KA +++
Sbjct: 267 TAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVM 326

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M      P+ + +T  I    +  + + A  ++E M E G  P++ TY  ++  + + 
Sbjct: 327 EEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKE 386

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA----KRVLK 439
                A  +L++M++  V+P +    ++ D +       EA    +R+LK
Sbjct: 387 GSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILK 436



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 136/282 (48%), Gaps = 37/282 (13%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAAL----TRQKRFKSILSLISK------ 54
           +G GK  +A  +   + +    P  I+YT  + AL     R++  K   +++ K      
Sbjct: 314 IGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDM 373

Query: 55  -------------------------VEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
                                    ++K  +KP+  ++  +++   +S  ++EA++++Q+
Sbjct: 374 HTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQR 433

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK-NVKPNDRTYNILVRAWCSK 148
           +   G  P+T TYNT+I     + K +E+L+LL+ M + K  ++P+  TY++++      
Sbjct: 434 ILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKV 493

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
              E A++++ +M+ +G+ PD  TY +L +  A  G+  RA ++L EM    + P++ T 
Sbjct: 494 GMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTY 553

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           G +V   C+  +++ A   L  M      PN   F ++ KGF
Sbjct: 554 GTLVQILCR-SDVDAAWDLLQEMMRNGHTPNEFTFKAVEKGF 594


>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
          Length = 927

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 212/430 (49%), Gaps = 36/430 (8%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           I Y  ++ A  +        +L+ ++E++G+     +++ M++  +  GN ++ + +F +
Sbjct: 374 IIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDR 433

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           +K+ G  P+  +Y  LI  Y  +GK  ++L++ ++M +   +K N +TY++L+  +    
Sbjct: 434 LKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMM-EVAGIKHNMKTYSMLINGFVRLK 492

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
               A+ V   +V  G++PD V YN + RA+   G   RA + + EMQ  + RP  RT  
Sbjct: 493 DWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFM 552

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            I+ G+ + G+M  A+     M+     P +  FN+LI G ++    +   + L  M   
Sbjct: 553 PIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLA 612

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH------------------ 311
           G+ P+  T++TIM  ++S G  GK  E F  +   G+E D++                  
Sbjct: 613 GISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSA 672

Query: 312 -----------------VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
                            V++IL  G+ R G+  +A  ++  M++ GV P++  +T+ I+ 
Sbjct: 673 LAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINA 732

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C A  MQRA    ++M  +G+ PN+KTY TL+ G+  A  P +A +  Q M+  G++P 
Sbjct: 733 CCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPD 792

Query: 415 KSTIQLVADS 424
           K+    +  S
Sbjct: 793 KAVYHCLMTS 802



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 180/353 (50%), Gaps = 1/353 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+ +  GK  +A  +   +   G +  + TY+ L+    R K + +  ++   V KDG+
Sbjct: 450 INLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGL 509

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD +L+N +I A    GN+D A++  ++M+    +PTT T+  +I G+   G    +L+
Sbjct: 510 KPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALE 569

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +  +M     + P   T+N L+     K  +E+A  ++ +M  +GI P+  TY T+   Y
Sbjct: 570 IFDMMRWSGCI-PTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGY 628

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A  G+T +A +   +++   +  +  T   ++   CK G M+ A+     M   ++  N 
Sbjct: 629 ASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNT 688

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            V+N LI G+    D     + +  M++ GV+PD+ T+++ ++A   AG M +  +   +
Sbjct: 689 FVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQE 748

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
           M   G++P+I  ++ L  G+ RA  P+KA      M+  G+ P+  ++  +++
Sbjct: 749 MEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMT 801



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/471 (20%), Positives = 209/471 (44%), Gaps = 36/471 (7%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  H A   F  +   G  PT   YT+L+ A    +  +  LS + K++++G++   + 
Sbjct: 281 RGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVT 340

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ ++   ++  + + A   F++ K+         Y  +I  +       ++  L++ M 
Sbjct: 341 YSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREME 400

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++    P D  Y+ ++  +    + E+   V  ++   G  P  ++Y  L   Y + G+ 
Sbjct: 401 EEGIDAPID-IYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKV 459

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A ++   M+   ++ N +T  ++++G+ +  +  +A      + +  + P++V++N++
Sbjct: 460 SKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNI 519

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I+ F  + + D   + +  M++   +P   TF  I+  ++ +G M +  EIFD M  +G 
Sbjct: 520 IRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGC 579

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW----------- 355
            P +H F+ L  G V   + +KA  IL  M   G+ PN   +TT++ G+           
Sbjct: 580 IPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFE 639

Query: 356 ------------------------CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
                                   C + +MQ A+++  +M    I  N   Y  L+ G+ 
Sbjct: 640 YFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWA 699

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
                W A EL+Q M+++GV+P   T     ++    G  + A + ++  E
Sbjct: 700 RRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEME 750



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/386 (23%), Positives = 179/386 (46%), Gaps = 1/386 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P+   +  +V    R+            +   G++P S ++ ++I+A +   +++EA+ 
Sbjct: 265 KPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALS 324

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
             +KMK+ G + +  TY+ L+ G+  +   E +    +  +++++   N   Y  ++ A 
Sbjct: 325 CVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFK-EAKERHTTLNAIIYGNIIYAH 383

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C   ++ +A  +V +M   GI      Y+T+   Y   G   +   +   ++     P+ 
Sbjct: 384 CQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSV 443

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            + G +++ Y K G +  A+     M+   +  N+  ++ LI GF+ +KD          
Sbjct: 444 ISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFED 503

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           + + G+KPDVV ++ I+ A+   G M +      +M K    P    F  +  G+ R+G+
Sbjct: 504 VVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGD 563

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            ++A  I   MR  G  P V  F  +I G     +M++A+ I ++M   GI+PN  TY T
Sbjct: 564 MRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTT 623

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGV 411
           ++ GY       +A E    ++ +G+
Sbjct: 624 IMHGYASLGDTGKAFEYFTKLKTEGL 649



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/344 (22%), Positives = 159/344 (46%), Gaps = 5/344 (1%)

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
           +E  N    ++ F+++K    KP+   +  ++  Y   G    +    + M + + ++P 
Sbjct: 248 TEPENWQAVVQAFERIK----KPSRKEFGLMVTYYARRGDMHHARGTFESM-RARGIEPT 302

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
              Y  L+ A+     +EEA + V KM   GI+   VTY+ L   +A+  +   A+    
Sbjct: 303 SHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFK 362

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           E +      N    G I+  +C+  NM  A   +  M+E  +   + ++++++ G+  I 
Sbjct: 363 EAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIG 422

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           + +        ++E G  P V+++  +++ +   G + K  E+   M  AGI+ ++  +S
Sbjct: 423 NEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYS 482

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
           +L  G+VR  +   A ++   + K G+ P+VV++  +I  +C    M RA+   ++M + 
Sbjct: 483 MLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKE 542

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
              P  +T+  ++ G+  +    RA E+  +M   G  P   T 
Sbjct: 543 RHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTF 586



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 151/339 (44%), Gaps = 28/339 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A  IF+ +   G  PT+ T+  L+  L  + + +  + ++ ++   G+ P+   +
Sbjct: 562 GDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTY 621

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +++  +  G+  +A + F K+K  G +    TY  L+K     G+ + +L + + MS 
Sbjct: 622 TTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSS 681

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K +  N   YNIL+  W  +  + EA  ++ +M   G+QPD  TY +   A  + G+  
Sbjct: 682 QK-IPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQ 740

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           RA + + EM+   V+PN +T   ++ G+ +    E A++    MK   + P+  V++ L+
Sbjct: 741 RATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLM 800

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
              L                         + +++ + +  +G++G C+E+ +  +   + 
Sbjct: 801 TSLL-------------------------SRASVAEEYIYSGVVGICREMIECELTVDMG 835

Query: 308 PDIHVFSILAKGYVRAGEPQKA--ESILTSMRKYGVHPN 344
             +H    L K     GE  +A  ++       Y +H N
Sbjct: 836 TAVHWSKCLRKIERTGGELTEALQKTFPPDWNSYNIHVN 874



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/325 (21%), Positives = 143/325 (44%), Gaps = 2/325 (0%)

Query: 114 KPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY 173
           +PE    ++Q   + K  KP+ + + ++V  +  +  +  A      M A GI+P +  Y
Sbjct: 249 EPENWQAVVQAFERIK--KPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVY 306

Query: 174 NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
            +L  AYA   +   A   + +M+   +  +  T  I+V G+ K  + E A  +    KE
Sbjct: 307 TSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKE 366

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
                N +++ ++I       +    +  +  MEE G+   +  + T+MD ++  G   K
Sbjct: 367 RHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEK 426

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
           C  +FD + + G  P +  +  L   Y++ G+  KA  +   M   G+  N+  ++ +I+
Sbjct: 427 CLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLIN 486

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G+        A +++E + + G+ P++  Y  ++  +       RA   ++ M+++  RP
Sbjct: 487 GFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRP 546

Query: 414 KKSTIQLVADSWRAIGLAREAKRVL 438
              T   +   +   G  R A  + 
Sbjct: 547 TTRTFMPIIHGFARSGDMRRALEIF 571



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/294 (21%), Positives = 132/294 (44%)

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           E W  V +      +P    +  +   YA+ G+ + A      M+   + P       ++
Sbjct: 251 ENWQAVVQAFERIKKPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLI 310

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
             Y    +ME+A+  + +MKE  +  +LV ++ L+ GF  I D++  D      +E    
Sbjct: 311 HAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTT 370

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            + + +  I+ A   A  M + + +  +M + GI+  I ++  +  GY   G  +K   +
Sbjct: 371 LNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIV 430

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              +++ G  P+V+ +  +I+ +    K+ +A+ + + M   GI  N+KTY  L+ G+  
Sbjct: 431 FDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVR 490

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
            K    A  + + + + G++P       +  ++  +G    A R +K  +++R 
Sbjct: 491 LKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERH 544


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 212/436 (48%), Gaps = 7/436 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  EA ++F+ +I EG RP ++TY TL+  L +     + + L+  + +   +P+   
Sbjct: 144 EGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFA 203

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I++  +   V EA  +F +M   G  P   TYN+LI    N+ + +    LL  M 
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 263

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            D  + P+  ++N +V A C +  + EA +VV KM+  G++P+ VTY  L   +    E 
Sbjct: 264 -DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEM 322

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++   M      PN  +   +++GYCK   ++ AM     M   E+ P+ V +++L
Sbjct: 323 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 382

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           I G   +   + +  A+ L  E       P++VT+  ++D       + +   +   +  
Sbjct: 383 IHGLCHV---ERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEG 439

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           + ++PDI V +I   G  RAGE + A  + +++   G+ P+V  ++ +I+G C    +  
Sbjct: 440 SNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDE 499

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  ++ +M E G   N   Y T+  G+    +  RA +LLQ M  +G     ST+ L   
Sbjct: 500 ASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVK 559

Query: 424 SWRAIGLAREAKRVLK 439
                GL +  K++L+
Sbjct: 560 MLSDDGLDQSLKQILR 575



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 200/421 (47%), Gaps = 1/421 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P + T   L+ +     R     S+++K+ K G +PD+  F  +I      G + EA
Sbjct: 91  GIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEA 150

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +F KM   G +P   TY TLI G   VG    +++LL  M Q KN +PN   YN ++ 
Sbjct: 151 LHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ-KNCQPNVFAYNTIID 209

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C    + EA+N+  +MV  GI PD  TYN+L  A     E      +L EM ++++ P
Sbjct: 210 SLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMP 269

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  +   +V   CKEG + +A   + +M +  V PN+V + +L+ G   + + D   K  
Sbjct: 270 DVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVF 329

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M   G  P+V++++T+++ +     + K   +F +M +  + PD   +S L  G    
Sbjct: 330 DTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHV 389

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
              Q A ++   M      PN+V +  ++   C    +  AM++ + +    ++P+++  
Sbjct: 390 ERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVN 449

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
              + G   A +   A +L   +  KG++P   T  ++ +     GL  EA ++ +  +E
Sbjct: 450 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDE 509

Query: 444 D 444
           +
Sbjct: 510 N 510



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 202/457 (44%), Gaps = 36/457 (7%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           FN ++     P+ + +  L+ ++ + K   ++LSL  +++  G+ P+    + +IN+   
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
              V  A  +  K+   G +P T+T+ T                                
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTT-------------------------------- 136

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
               L+R    +  I EA ++  KM+  G +PD VTY TL     + G T  A ++L  M
Sbjct: 137 ----LIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSM 192

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
                +PN      I+   CK+  + +A      M    + P++  +NSLI    ++ + 
Sbjct: 193 VQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEW 252

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
             V   L  M +  + PDVV+F+T++DA    G + +  ++ D M++ G+EP++  ++ L
Sbjct: 253 KHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTAL 312

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G+    E  +A  +  +M   G  PNV+ + T+I+G+C   ++ +AM ++ +MC   +
Sbjct: 313 MDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQEL 372

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            P+  TY TL+ G    ++   A  L   M      P   T +++ D         EA  
Sbjct: 373 IPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMA 432

Query: 437 VLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF 473
           +LK+ E        + + IA++ + R   L A+   F
Sbjct: 433 LLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLF 469



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/382 (23%), Positives = 173/382 (45%), Gaps = 1/382 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G    A  +   ++++  +P +  Y T++ +L + ++     +L S++   G+
Sbjct: 173 INGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGI 232

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +N++I+A            +  +M DS   P   ++NT++      GK  E+  
Sbjct: 233 SPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHD 292

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           ++  M Q + V+PN  TY  L+   C  + ++EA  V   MV  G  P+ ++YNTL   Y
Sbjct: 293 VVDKMIQ-RGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGY 351

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +     +A  +  EM   ++ P+  T   ++ G C    ++DA+   + M      PNL
Sbjct: 352 CKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNL 411

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +  L+      +        L  +E   + PD+   +  +D    AG +   +++F +
Sbjct: 412 VTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSN 471

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +   G++PD+  +SI+  G  R G   +A  +   M + G   N  ++ T+  G+    +
Sbjct: 472 LSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNE 531

Query: 361 MQRAMSIYEKMCEIGINPNLKT 382
             RA+ + ++M   G + +  T
Sbjct: 532 TSRAIQLLQEMVARGFSADAST 553



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 141/303 (46%), Gaps = 7/303 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EAH + + +I+ G  P ++TYT L+            + +   +   G  P+
Sbjct: 281 LCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPN 340

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I +N +IN   +   +D+AM +F +M      P T TY+TLI G  +V + ++++ L  
Sbjct: 341 VISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFH 400

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M     + PN  TY IL+   C    + EA  ++  +  S + PD    N       + 
Sbjct: 401 EMVACSQI-PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRA 459

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           GE   A  +   + +  ++P+  T  I+++G C+ G +++A +    M E     N  ++
Sbjct: 460 GELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIY 519

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N++ +GFL    ++   +A+ L++E    G   D  T +  +   S  GL    ++I  +
Sbjct: 520 NTITRGFL---RNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRE 576

Query: 301 MVK 303
            V+
Sbjct: 577 FVQ 579



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 128/303 (42%), Gaps = 41/303 (13%)

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
           N+I+ A +   +M+     P  V +N L  + A+         +  +M +  + PN  T 
Sbjct: 40  NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
            I+++ +C    +  A   L ++ +L   P+   F +LI+G   I     + +AL L ++
Sbjct: 100 HILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRG---IYVEGKIGEALHLFDK 156

Query: 269 F---GVKPDVVTFSTIMDAWSSAG-------LMG-----KCQ------------------ 295
               G +PDVVT+ T+++     G       L+G      CQ                  
Sbjct: 157 MIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQ 216

Query: 296 -----EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
                 +F +MV  GI PDI  ++ L        E +   ++L  M    + P+VV F T
Sbjct: 217 VTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNT 276

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           V+   C   K+  A  + +KM + G+ PN+ TY  L+ G+    +   A ++   M  KG
Sbjct: 277 VVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKG 336

Query: 411 VRP 413
             P
Sbjct: 337 CMP 339



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 69/169 (40%)

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           DG   +   M      P  V F+ ++ + +          +   M   GI P+I+   IL
Sbjct: 43  DGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHIL 102

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
              +        A S+L  + K G  P+   FTT+I G     K+  A+ +++KM   G 
Sbjct: 103 INSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGF 162

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            P++ TY TL+ G  +      A  LL  M +K  +P       + DS 
Sbjct: 163 RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 211


>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic [Vitis vinifera]
          Length = 929

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 212/430 (49%), Gaps = 36/430 (8%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           I Y  ++ A  +        +L+ ++E++G+     +++ M++  +  GN ++ + +F +
Sbjct: 395 IIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDR 454

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           +K+ G  P+  +Y  LI  Y  +GK  ++L++ ++M +   +K N +TY++L+  +    
Sbjct: 455 LKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMM-EVAGIKHNMKTYSMLINGFVRLK 513

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
               A+ V   +V  G++PD V YN + RA+   G   RA + + EMQ  + RP  RT  
Sbjct: 514 DWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFM 573

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            I+ G+ + G+M  A+     M+     P +  FN+LI G ++    +   + L  M   
Sbjct: 574 PIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLA 633

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH------------------ 311
           G+ P+  T++TIM  ++S G  GK  E F  +   G+E D++                  
Sbjct: 634 GISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSA 693

Query: 312 -----------------VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
                            V++IL  G+ R G+  +A  ++  M++ GV P++  +T+ I+ 
Sbjct: 694 LAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINA 753

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C A  MQRA    ++M  +G+ PN+KTY TL+ G+  A  P +A +  Q M+  G++P 
Sbjct: 754 CCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPD 813

Query: 415 KSTIQLVADS 424
           K+    +  S
Sbjct: 814 KAVYHCLMTS 823



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 180/353 (50%), Gaps = 1/353 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+ +  GK  +A  +   +   G +  + TY+ L+    R K + +  ++   V KDG+
Sbjct: 471 INLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGL 530

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD +L+N +I A    GN+D A++  ++M+    +PTT T+  +I G+   G    +L+
Sbjct: 531 KPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALE 590

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +  +M     + P   T+N L+     K  +E+A  ++ +M  +GI P+  TY T+   Y
Sbjct: 591 IFDMMRWSGCI-PTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGY 649

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A  G+T +A +   +++   +  +  T   ++   CK G M+ A+     M   ++  N 
Sbjct: 650 ASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNT 709

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            V+N LI G+    D     + +  M++ GV+PD+ T+++ ++A   AG M +  +   +
Sbjct: 710 FVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQE 769

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
           M   G++P+I  ++ L  G+ RA  P+KA      M+  G+ P+  ++  +++
Sbjct: 770 MEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMT 822



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/386 (23%), Positives = 179/386 (46%), Gaps = 1/386 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P+   +  +V    R+            +   G++P S ++ ++I+A +   +++EA+ 
Sbjct: 286 KPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALS 345

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
             +KMK+ G + +  TY+ L+ G+  +   E +    +  +++++   N   Y  ++ A 
Sbjct: 346 CVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFK-EAKERHTTLNAIIYGNIIYAH 404

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C   ++ +A  +V +M   GI      Y+T+   Y   G   +   +   ++     P+ 
Sbjct: 405 CQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSV 464

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            + G +++ Y K G +  A+     M+   +  N+  ++ LI GF+ +KD          
Sbjct: 465 ISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFED 524

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           + + G+KPDVV ++ I+ A+   G M +      +M K    P    F  +  G+ R+G+
Sbjct: 525 VVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGD 584

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            ++A  I   MR  G  P V  F  +I G     +M++A+ I ++M   GI+PN  TY T
Sbjct: 585 MRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTT 644

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGV 411
           ++ GY       +A E    ++ +G+
Sbjct: 645 IMHGYASLGDTGKAFEYFTKLKTEGL 670



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/471 (20%), Positives = 209/471 (44%), Gaps = 36/471 (7%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  H A   F  +   G  PT   YT+L+ A    +  +  LS + K++++G++   + 
Sbjct: 302 RGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVT 361

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ ++   ++  + + A   F++ K+         Y  +I  +       ++  L++ M 
Sbjct: 362 YSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREME 421

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++    P D  Y+ ++  +    + E+   V  ++   G  P  ++Y  L   Y + G+ 
Sbjct: 422 EEGIDAPID-IYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKV 480

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A ++   M+   ++ N +T  ++++G+ +  +  +A      + +  + P++V++N++
Sbjct: 481 SKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNI 540

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I+ F  + + D   + +  M++   +P   TF  I+  ++ +G M +  EIFD M  +G 
Sbjct: 541 IRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGC 600

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW----------- 355
            P +H F+ L  G V   + +KA  IL  M   G+ PN   +TT++ G+           
Sbjct: 601 IPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFE 660

Query: 356 ------------------------CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
                                   C + +MQ A+++  +M    I  N   Y  L+ G+ 
Sbjct: 661 YFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWA 720

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
                W A EL+Q M+++GV+P   T     ++    G  + A + ++  E
Sbjct: 721 RRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEME 771



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/344 (22%), Positives = 159/344 (46%), Gaps = 5/344 (1%)

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
           +E  N    ++ F+++K    KP+   +  ++  Y   G    +    + M + + ++P 
Sbjct: 269 TEPENWQAVVQAFERIK----KPSRKEFGLMVTYYARRGDMHHARGTFESM-RARGIEPT 323

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
              Y  L+ A+     +EEA + V KM   GI+   VTY+ L   +A+  +   A+    
Sbjct: 324 SHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFK 383

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           E +      N    G I+  +C+  NM  A   +  M+E  +   + ++++++ G+  I 
Sbjct: 384 EAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIG 443

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           + +        ++E G  P V+++  +++ +   G + K  E+   M  AGI+ ++  +S
Sbjct: 444 NEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYS 503

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
           +L  G+VR  +   A ++   + K G+ P+VV++  +I  +C    M RA+   ++M + 
Sbjct: 504 MLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKE 563

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
              P  +T+  ++ G+  +    RA E+  +M   G  P   T 
Sbjct: 564 RHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTF 607



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 151/339 (44%), Gaps = 28/339 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A  IF+ +   G  PT+ T+  L+  L  + + +  + ++ ++   G+ P+   +
Sbjct: 583 GDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTY 642

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +++  +  G+  +A + F K+K  G +    TY  L+K     G+ + +L + + MS 
Sbjct: 643 TTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSS 702

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K +  N   YNIL+  W  +  + EA  ++ +M   G+QPD  TY +   A  + G+  
Sbjct: 703 QK-IPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQ 761

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           RA + + EM+   V+PN +T   ++ G+ +    E A++    MK   + P+  V++ L+
Sbjct: 762 RATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLM 821

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
              L                         + +++ + +  +G++G C+E+ +  +   + 
Sbjct: 822 TSLL-------------------------SRASVAEEYIYSGVVGICREMIECELTVDMG 856

Query: 308 PDIHVFSILAKGYVRAGEPQKA--ESILTSMRKYGVHPN 344
             +H    L K     GE  +A  ++       Y +H N
Sbjct: 857 TAVHWSKCLRKIERTGGELTEALQKTFPPDWNSYNIHVN 895



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/325 (21%), Positives = 143/325 (44%), Gaps = 2/325 (0%)

Query: 114 KPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY 173
           +PE    ++Q   + K  KP+ + + ++V  +  +  +  A      M A GI+P +  Y
Sbjct: 270 EPENWQAVVQAFERIK--KPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVY 327

Query: 174 NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
            +L  AYA   +   A   + +M+   +  +  T  I+V G+ K  + E A  +    KE
Sbjct: 328 TSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKE 387

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
                N +++ ++I       +    +  +  MEE G+   +  + T+MD ++  G   K
Sbjct: 388 RHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEK 447

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
           C  +FD + + G  P +  +  L   Y++ G+  KA  +   M   G+  N+  ++ +I+
Sbjct: 448 CLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLIN 507

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G+        A +++E + + G+ P++  Y  ++  +       RA   ++ M+++  RP
Sbjct: 508 GFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRP 567

Query: 414 KKSTIQLVADSWRAIGLAREAKRVL 438
              T   +   +   G  R A  + 
Sbjct: 568 TTRTFMPIIHGFARSGDMRRALEIF 592



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/294 (21%), Positives = 132/294 (44%)

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           E W  V +      +P    +  +   YA+ G+ + A      M+   + P       ++
Sbjct: 272 ENWQAVVQAFERIKKPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLI 331

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
             Y    +ME+A+  + +MKE  +  +LV ++ L+ GF  I D++  D      +E    
Sbjct: 332 HAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTT 391

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            + + +  I+ A   A  M + + +  +M + GI+  I ++  +  GY   G  +K   +
Sbjct: 392 LNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIV 451

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              +++ G  P+V+ +  +I+ +    K+ +A+ + + M   GI  N+KTY  L+ G+  
Sbjct: 452 FDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVR 511

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
            K    A  + + + + G++P       +  ++  +G    A R +K  +++R 
Sbjct: 512 LKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERH 565


>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
 gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
           [Oryza sativa Japonica Group]
 gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
 gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 793

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 128/516 (24%), Positives = 228/516 (44%), Gaps = 75/516 (14%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A   F  L   GH P ++TY  L+    +   +   L ++ ++E  G +PD++ +
Sbjct: 265 GLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTY 324

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +    + +G  +EA K    M   G  P T TYNT++  Y NVG+ +E+L L   M +
Sbjct: 325 NELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKK 384

Query: 128 DKNVKPNDRTYNILV--------------------RAWCSKNSIEEAWNVV--------- 158
           +  V PN  TYN++                     R+ C+ N +   WN +         
Sbjct: 385 NGYV-PNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRV--TWNTMLAVCGKRGM 441

Query: 159 ---------------------------------------YKM----VASGIQPDAVTYNT 175
                                                  +KM    ++SG  P   TYN 
Sbjct: 442 EDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNA 501

Query: 176 LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
           L    ++ G+   A+ ++ +M  N  +PN+++  +++  Y K GN          +    
Sbjct: 502 LLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGT 561

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           + P+ V+  +L+      +  +GV+KA   ++  G KPD+V F++++  ++  GL  K  
Sbjct: 562 IFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKAT 621

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           E+FD + ++G+ PD+  ++ L   Y ++ E  +AE IL  ++   V P+VV + TVI+G+
Sbjct: 622 EMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGF 681

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C    ++ A  I  +M   G+ P + TY TL+ GY   +    A E++  M    ++P +
Sbjct: 682 CKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPME 741

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
            T + V DS+       EA+  L    +  Q+   K
Sbjct: 742 LTYRRVVDSYCKAKRYDEAREFLSEISDTDQNFDQK 777



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 209/459 (45%), Gaps = 42/459 (9%)

Query: 20  LIEE----GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           L+EE    G  P   T +T++AA  R       ++    ++  G  P  + +NA++    
Sbjct: 238 LLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFG 297

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           ++GN  EA+++ ++M+DSGC+P   TYN L   Y   G  EE+ K L  M+  K + PN 
Sbjct: 298 KAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTS-KGLLPNT 356

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TYN ++ A+ +   ++EA  +  +M  +G  P+  TYN +     +        +ML E
Sbjct: 357 FTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEE 416

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMED-AMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           M  +   PN  T   +++  C +  MED   R L  MK   V  +   +N+LI  +    
Sbjct: 417 MSRSGCTPNRVTWNTMLA-VCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCG 475

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
                 K    M   G  P + T++ +++  S  G     Q I   M+K G +P+   +S
Sbjct: 476 SRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYS 535

Query: 315 ILAKGYVRAGEPQKAESI-----------------------------------LTSMRKY 339
           +L + Y + G     ESI                                      ++  
Sbjct: 536 LLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQ 595

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
           G  P++V+F ++++ +       +A  +++ + + G++P+L TY +L+  Y ++ + W A
Sbjct: 596 GYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEA 655

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           E++L+ ++   V+P   +   V + +   GL +EA+R+L
Sbjct: 656 EKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRIL 694



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 115/476 (24%), Positives = 213/476 (44%), Gaps = 39/476 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDG 59
           ++ L   G+   A  +F  L  +G  PT++TY  ++    R  R +  I++L+ ++   G
Sbjct: 187 LHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAG 246

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           ++PD    + +I AC   G +D+A+  F+ +K  G  P   TYN L++ +G  G   E+L
Sbjct: 247 VEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEAL 306

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           ++L+ M +D   +P+  TYN L   +      EEA   +  M + G+ P+  TYNT+  A
Sbjct: 307 RVLKEM-EDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTA 365

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           YA  G    A  +   M+ N   PN  T  +I     K+      +  L  M      PN
Sbjct: 366 YANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPN 425

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            V +N+++         D V + L  M+  GV+    T++T++ A+   G      +++D
Sbjct: 426 RVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYD 485

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN--------------- 344
           +M+ +G  P +  ++ L     R G+   A+SI++ M K G  PN               
Sbjct: 486 EMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGG 545

Query: 345 ---------------------VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
                                V++ T VI+ +    +++     ++++   G  P+L  +
Sbjct: 546 NAAGIESIEKEVYVGTIFPSWVILRTLVIANF-KCRRLEGVEKAFQEVKAQGYKPDLVIF 604

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            ++L  Y +     +A E+   +++ G+ P   T   + D +     + EA+++LK
Sbjct: 605 NSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILK 660



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/421 (22%), Positives = 183/421 (43%), Gaps = 36/421 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M      G+  EA  +F+ + + G+ P + TY  +   L ++ RF ++L ++ ++ + G 
Sbjct: 363 MTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGC 422

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +N M+  C + G  D   ++   MK  G + +  TYNTLI  YG  G    + K
Sbjct: 423 TPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFK 482

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M       P   TYN L+     +     A ++V KM+ +G +P+  +Y+ L + Y
Sbjct: 483 MYDEMIS-SGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCY 541

Query: 181 AQYG----------ETYRA-------------------------EQMLFEMQNNQVRPNE 205
           A+ G          E Y                           E+   E++    +P+ 
Sbjct: 542 AKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDL 601

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
                +++ Y K G    A      +K+  + P+L+ +NSL+  +    +S   +K L  
Sbjct: 602 VIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQ 661

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           ++   VKPDVV+++T+++ +   GL+ + Q I  +M+  G+ P +  +  L  GY     
Sbjct: 662 LKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEM 721

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A  ++  M  + + P  + +  V+  +C A +   A     ++ +   N + K    
Sbjct: 722 FNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISDTDQNFDQKLQHM 781

Query: 386 L 386
           L
Sbjct: 782 L 782



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 171/398 (42%), Gaps = 42/398 (10%)

Query: 35  LVAALTRQKRFKSILSLISKVE-KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS 93
           +V AL R+ +   +  L+ ++    G + D   +  +++A S +G  + A+++F +++  
Sbjct: 150 VVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQ 209

Query: 94  GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR----------------- 136
           G  PT  TYN ++  YG +G+    +  L    +   V+P+D                  
Sbjct: 210 GVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQ 269

Query: 137 ------------------TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
                             TYN L++ +    +  EA  V+ +M  SG QPDAVTYN LA 
Sbjct: 270 AVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAG 329

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            YA+ G    A + L  M +  + PN  T   +++ Y   G +++A+    RMK+    P
Sbjct: 330 TYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVP 389

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           N+  +N LI G L  K        L ++EE    G  P+ VT++T++      G+     
Sbjct: 390 NVNTYN-LIFGMLGKKSR--FTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVT 446

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
            + + M   G+E     ++ L   Y R G    A  +   M   G  P +  +  +++  
Sbjct: 447 RVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVL 506

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
                   A SI  KM + G  PN ++Y  LL  Y + 
Sbjct: 507 SRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKG 544


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 116/479 (24%), Positives = 217/479 (45%), Gaps = 1/479 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+LV   K      +++ + E G +P ++T+ TL+ AL R  + ++ + ++ ++   G+
Sbjct: 157 LNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGV 216

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   F  ++    E G++  A+++  +M + GC PT  T N LI GY  +G+ E++L 
Sbjct: 217 APDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALG 276

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            +Q        +P+  TYN  V   C    +  A  V+  MV  G  PD  TYN +    
Sbjct: 277 YIQ-QEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 335

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A+ +L +M      P+  T   ++   C    +E+A+    ++    + P++
Sbjct: 336 CKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDV 395

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FN LI     + D     +    M+  G  PD VT++T++D   S G +GK  ++  +
Sbjct: 396 YTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKE 455

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M  AG       ++ +  G  +    ++AE +   M   G+  N + F T+I G C   +
Sbjct: 456 MESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKR 515

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  +  +M   G+ PN  TY ++L  Y +     +A ++LQ M   G      T   
Sbjct: 516 IDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGT 575

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGV 479
           + +     G  + A ++L+           K     ++S+ R+ N   + + F ++  V
Sbjct: 576 LINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEV 634



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 201/411 (48%), Gaps = 2/411 (0%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
           I  G  P  ITY T V  L +       L ++  + ++G  PD   +N ++N   ++G +
Sbjct: 282 IANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 341

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           +EA  I  +M + GC P  +T+NTLI    +  + EE+L L + ++  K + P+  T+NI
Sbjct: 342 EEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTL-KGLSPDVYTFNI 400

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+ A C     + A  +  +M +SG  PD VTYNTL       G+  +A  +L EM++  
Sbjct: 401 LINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAG 460

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
              +  T   I+ G CK+  +E+A     +M    +  N + FN+LI G    K  D  +
Sbjct: 461 CPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDAN 520

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           + ++ M   G++P+ +T+++I+  +   G + K  +I   M   G E D+  +  L  G 
Sbjct: 521 QLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGL 580

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            +AG  Q A  +L  MR  G+      +  VI         + AM+++ +M E+G  P+ 
Sbjct: 581 CKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDA 640

Query: 381 KTYETLLWGYGEAKQPWR-AEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
            TY+ +  G        R A + L  M +KG  P+ S+ +++A+    +G+
Sbjct: 641 FTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGM 691



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 209/420 (49%), Gaps = 7/420 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +   + Y  L+  L    + K + ++ S++ + G+KPD + FN ++ A   +  V  A
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + + ++M  SG  P  +T+ TL++G+   G  + +L++   M +     P   T N+L+ 
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLE-MGCSPTKVTVNVLIN 263

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +C    +E+A   + + +A+G +PD +TYNT      Q G    A +++  M      P
Sbjct: 264 GYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDP 323

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T  I+V+  CK G +E+A   L +M E    P++  FN+LI   + +   + +++AL
Sbjct: 324 DVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLI---VALCSGNRLEEAL 380

Query: 264 TLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
            L  +    G+ PDV TF+ +++A    G       +F++M  +G  PD   ++ L    
Sbjct: 381 DLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNL 440

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
              G+  KA  +L  M   G   + V + T+I G C  ++++ A  ++++M   GI+ N 
Sbjct: 441 CSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 500

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            T+ TL+ G  + K+   A +L+  M  +G++P   T   +   +   G  ++A  +L++
Sbjct: 501 ITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQT 560



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 152/316 (48%), Gaps = 41/316 (12%)

Query: 165 GIQPDAVTYN-------------TLARAYAQYGE--------TY--------RAEQ---- 191
           GIQ D V YN              L   Y++ GE        T+        RA Q    
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204

Query: 192 --MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
             ML EM ++ V P+E T   ++ G+ +EG+++ A+R   RM E+   P  V  N LI G
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264

Query: 250 FLDIKDSDGVDKALTLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +  +     V+ AL  +++    G +PD +T++T ++     G +G   ++ D MV+ G 
Sbjct: 265 YCKLGR---VEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGH 321

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           +PD+  ++I+     + G+ ++A+ IL  M + G  P++  F T+I   C+  +++ A+ 
Sbjct: 322 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALD 381

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           +  ++   G++P++ T+  L+    +   P  A  L + M+  G  P + T   + D+  
Sbjct: 382 LARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLC 441

Query: 427 AIGLAREAKRVLKSAE 442
           ++G   +A  +LK  E
Sbjct: 442 SLGKLGKALDLLKEME 457



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 70/179 (39%), Gaps = 37/179 (20%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   +A  I   +   G    ++TY TL+  L +  R +  L L+  +   GM+     
Sbjct: 548 QGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKA 607

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I +     N  +AM +F++M +                   VG+P           
Sbjct: 608 YNPVIQSLFRRNNTRDAMNLFREMTE-------------------VGEP----------- 637

Query: 127 QDKNVKPNDRTYNILVRAWC-SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
                 P+  TY I+ R  C    SI EA++ + +MV  G  P+  ++  LA      G
Sbjct: 638 ------PDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLG 690



 Score = 46.2 bits (108), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 28/136 (20%), Positives = 64/136 (47%), Gaps = 1/136 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+   A  +   +  +G R T   Y  ++ +L R+   +  ++L  ++ + G 
Sbjct: 577 INGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGE 636

Query: 61  KPDSILFNAMINA-CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
            PD+  +  +    C   G++ EA     +M D G  P  S++  L +G  N+G  +  +
Sbjct: 637 PPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFI 696

Query: 120 KLLQLMSQDKNVKPND 135
           + ++++ +  ++  +D
Sbjct: 697 RAIEIIIEKADLGDSD 712


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 218/448 (48%), Gaps = 9/448 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA ++F+  I EG +P ++TY TL+  L +     + + L+  + +   +P+
Sbjct: 230 LCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPN 289

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I +N +I++  +   V EA  +F +M   G  P   TYN+LI    N+ + +    LL 
Sbjct: 290 VIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLN 349

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K + PN   ++ +V A C +  I  A +VV  M+  G++PD VTY  L   +   
Sbjct: 350 EMVNSK-IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLR 408

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E   A ++   M +    PN R+  I+++GYC+   M+ AM  L +M    +  + V +
Sbjct: 409 SEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTY 468

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N+LI G   +     +  A+ L  E    G  PD+VT+  ++D       + +   +   
Sbjct: 469 NTLIHGLCHVGR---LQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKA 525

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +  + ++ DI V++I   G  RAGE + A  + +++   G+ P+V  +  +I G C    
Sbjct: 526 IEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGL 585

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ KM E G + +   Y T++ G+  + + + A +LLQ M  +G     ST  L
Sbjct: 586 LDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTL 645

Query: 421 VADSWRAIGLAR--EAKRVLKSAEEDRQ 446
           + +     GL +  E  R+    EEDR+
Sbjct: 646 IVEMLSDDGLDQSFERLRLRGVGEEDRE 673



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 199/457 (43%), Gaps = 36/457 (7%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           FN ++     P+ + +T L+ ++ + K + ++LSL ++++  G+ PD    N +IN+   
Sbjct: 138 FNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCH 197

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
              +  A  +  K+   GC+P                                    ++ 
Sbjct: 198 LRRLGYAFSVLAKLLKLGCQP------------------------------------DNT 221

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           T+N L+R  C +  I EA ++  K +  G QPD VTY TL     + G T  A ++L  M
Sbjct: 222 TFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSM 281

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
                RPN      I+   CK+  + +A      M    + P++  +NSLI    ++ + 
Sbjct: 282 VQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEW 341

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
             V   L  M    + P+VV FST++DA    G++    ++ D M+K G+EPD+  ++ L
Sbjct: 342 KHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTAL 401

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G+    E  +A  +  +M   G  PNV  +  +I+G+C   +M +AM + E+M   G+
Sbjct: 402 MDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGL 461

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
             +  TY TL+ G     +   A  L   M   G  P   T +++ D         EA  
Sbjct: 462 IADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMV 521

Query: 437 VLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF 473
           +LK+ E            IA++ + R   L A+   F
Sbjct: 522 LLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLF 558



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/330 (21%), Positives = 141/330 (42%), Gaps = 48/330 (14%)

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
           N++++A +   +M+     P  V +  L  + A+         +  +M +  + P+  T 
Sbjct: 129 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 188

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
            I+++ +C    +  A   L ++ +L   P+   FN+LI+G L ++   G  +AL L ++
Sbjct: 189 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRG-LCVEGKIG--EALHLFDK 245

Query: 269 F---GVKPDVVTFSTIMDAWSSAG---------------------------LMGKCQE-- 296
               G +PDVVT+ T+M+     G                           +   C++  
Sbjct: 246 TIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQ 305

Query: 297 ------IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
                 +F +M+  GI PDI  ++ L        E +   ++L  M    + PNVV+F+T
Sbjct: 306 VTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFST 365

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           V+   C    +  A  + + M + G+ P++ TY  L+ G+    +   A ++   M  KG
Sbjct: 366 VVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKG 425

Query: 411 VRPKKSTIQLVADSW-------RAIGLARE 433
             P   +  ++ + +       +A+GL  +
Sbjct: 426 CVPNVRSYNILINGYCQIQRMDKAMGLLEQ 455


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 113/476 (23%), Positives = 221/476 (46%), Gaps = 5/476 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +P + T+  L+ AL R  + +  + ++  +   G+ PD   F  ++    E G++D A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGA 243

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           ++I ++M + GC  +  + N ++ G+   G+ E++L  +Q MS      P+  T+N LV 
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C    ++ A  ++  M+  G  PD  TYN++     + GE   A + L +M      P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSP 363

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  T   ++S  CKE  +E+A      +    + P++  FNSLI+G    ++     +  
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M   G +PD  T++ ++D+  S G + +   +   M  +G    +  ++ L  G+ +A
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
            + ++AE I   M  +GV  N V + T+I G C + +++ A  + ++M   G  P+  TY
Sbjct: 484 NKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTY 543

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            +LL  +       +A +++Q M   G  P   T   +       G    A ++L+S + 
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603

Query: 444 DRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSEHNGSSAAKIRSQIVLR 499
              ++        ++ + RK+  + + + F ++      E N ++   +  +IV R
Sbjct: 604 KGIALTPHAYNPVIQGLFRKRKTTEAINLFREM-----LEQNEAAPDAVSYRIVFR 654



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 198/392 (50%), Gaps = 4/392 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE-KDGMKPDSILFNAMINACSESG 78
           ++E G   + ++   +V    ++ R +  L+ I ++  +DG  PD   FN ++N   ++G
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-QLMSQDKNVKPNDRT 137
           +V  A++I   M   G  P   TYN++I G   +G+ +E+++ L Q++++D    PN  T
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRD--CSPNTVT 367

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           YN L+   C +N +EEA  +   + + GI PD  T+N+L +          A ++  EM+
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
           +    P+E T  +++   C +G +++A+  L +M+      +++ +N+LI GF       
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIR 487

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
             ++    ME  GV  + VT++T++D    +  +    ++ D M+  G +PD   ++ L 
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLL 547

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
             + R G+ +KA  I+ +M   G  P++V + T+ISG C A +++ A  +   +   GI 
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIA 607

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
                Y  ++ G    ++   A  L + M E+
Sbjct: 608 LTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 196/399 (49%), Gaps = 9/399 (2%)

Query: 48  ILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIK 107
           + +L SK  K    P+  L+  ++     SG+ D+  KI + MK+SGC+  TS +  LI+
Sbjct: 69  LFNLASK--KPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIE 126

Query: 108 GYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ 167
            Y      +E L ++  M  D  +KP+   YN ++      N+++       KM   GI+
Sbjct: 127 SYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIK 186

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
           PD  T+N L +A  +  +   A  ML +M +  + P+E+T   I+ GY +EG+++ A+R 
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRI 246

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF----GVKPDVVTFSTIMD 283
             +M E     + V  N ++ GF        V+ AL  ++E     G  PD  TF+T+++
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFC---KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
               AG +    EI D M++ G +PD++ ++ +  G  + GE ++A   L  M      P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSP 363

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           N V + T+IS  C   +++ A  +   +   GI P++ T+ +L+ G    +    A EL 
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           + M  KG  P + T  ++ DS  + G   EA  +LK  E
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 192/394 (48%), Gaps = 9/394 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G    A  I + +++EG+ P + TY ++++ L +    K  +  + ++     
Sbjct: 302 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDC 361

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+++ +N +I+   +   V+EA ++ + +   G  P   T+N+LI+G         +++
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 421

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M + K  +P++ TYN+L+ + CSK  ++EA N++ +M  SG     +TYNTL   +
Sbjct: 422 LFEEM-RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +   AE++  EM+ + V  N  T   ++ G CK   +EDA + + +M      P+ 
Sbjct: 481 CKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDK 540

Query: 241 VVFNSLIKGFL---DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             +NSL+  F    DIK +  + +A+T     G +PD+VT+ T++     AG +    ++
Sbjct: 541 FTYNSLLTHFCRGGDIKKAADIVQAMT---SNGCEPDIVTYGTLISGLCKAGRVEVASKL 597

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG-VHPNVVMFTTVISGWC 356
              +   GI    H ++ + +G  R  +  +A ++   M +     P+ V +  V  G C
Sbjct: 598 LRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLC 657

Query: 357 N-AVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           N    ++ A+    ++ E G  P   +   L  G
Sbjct: 658 NGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEG 691



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 112/254 (44%), Gaps = 17/254 (6%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  IF+ +   G     +TY TL+  L + +R +    L+ ++  +G KPD   +N
Sbjct: 485 KIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYN 544

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           +++      G++ +A  I Q M  +GC+P   TY TLI G    G+ E + KLL+ + Q 
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI-QM 603

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG-IQPDAVTYNTLARAYAQYGETY 187
           K +      YN +++    K    EA N+  +M+      PDAV+Y  + R     G   
Sbjct: 604 KGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPI 663

Query: 188 R-AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL------YRMKELEVHPNL 240
           R A   L E+      P   +  ++  G       E  ++ +       R  E EV    
Sbjct: 664 REAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEV---- 719

Query: 241 VVFNSLIKGFLDIK 254
               S++KG L I+
Sbjct: 720 ----SMVKGLLKIR 729



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/184 (20%), Positives = 76/184 (41%), Gaps = 3/184 (1%)

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
           E G  P ++   +         ++G    + DD    G++PD H ++ +    V     +
Sbjct: 115 EMGTSPFLILIESYAQFELQDEILGVVHWMIDDF---GLKPDTHFYNRMLNLLVDGNNLK 171

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
             E     M  +G+ P+V  F  +I   C A +++ A+ + E M   G+ P+ KT+ T++
Sbjct: 172 LVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIM 231

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS 447
            GY E      A  + + M E G      ++ ++   +   G   +A   ++        
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291

Query: 448 MPNK 451
            P++
Sbjct: 292 FPDQ 295


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 210/419 (50%), Gaps = 1/419 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   ++  IF  +   G  P++ T   ++ ++ +     S+ S + ++ K  + PD   
Sbjct: 176 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVAT 235

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           FN +IN     G+ +++  + QKM+ SG  PT  TYNT++  Y   G+ + +++LL  M 
Sbjct: 236 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM- 294

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + K V  +  TYN+L+   C  N I + + ++  M    I P+ VTYNTL   ++  G+ 
Sbjct: 295 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 354

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A Q+L EM +  + PN  T   ++ G+  EGN ++A++  Y M+   + P+ V +  L
Sbjct: 355 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 414

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + G     + D        M+  GV    +T++ ++D     G + +   + ++M K GI
Sbjct: 415 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI 474

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           +PDI  +S L  G+ + G  + A+ I+  + + G+ PN ++++T+I   C    ++ A+ 
Sbjct: 475 DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIR 534

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           IYE M   G   +  T+  L+    +A +   AEE ++ M   G+ P   +   + + +
Sbjct: 535 IYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 593



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 202/407 (49%), Gaps = 1/407 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+L  +G   ++ Y+   + + G+ PT++TY T++    ++ RFK+ + L+  ++  G+
Sbjct: 240 INVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV 299

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D   +N +I+    S  + +   + + M+     P   TYNTLI G+ N GK   + +
Sbjct: 300 DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQ 359

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M     + PN  T+N L+    S+ + +EA  + Y M A G+ P  V+Y  L    
Sbjct: 360 LLNEM-LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 418

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  E   A      M+ N V     T   ++ G CK G +++A+  L  M +  + P++
Sbjct: 419 CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 478

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +++LI GF  +       + +  +   G+ P+ + +ST++      G + +   I++ 
Sbjct: 479 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 538

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  G   D   F++L     +AG+  +AE  +  M   G+ PN V F  +I+G+ N+ +
Sbjct: 539 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 598

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
             +A S++++M ++G +P   TY +LL G  +      AE+ L+ + 
Sbjct: 599 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 645



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/422 (23%), Positives = 190/422 (45%), Gaps = 2/422 (0%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           + +G   EA  +F  +  +G  P+ ++Y  L+  L +   F        +++++G+    
Sbjct: 384 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 443

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           I +  MI+   ++G +DEA+ +  +M   G  P   TY+ LI G+  VG+ + + +++  
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           + +   + PN   Y+ L+   C    ++EA  +   M+  G   D  T+N L  +  + G
Sbjct: 504 IYR-VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 562

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +   AE+ +  M ++ + PN  +   +++GY   G    A      M ++  HP    + 
Sbjct: 563 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 622

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           SL+KG          +K L  +       D V ++T++ A   +G + K   +F +MV+ 
Sbjct: 623 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 682

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG-VHPNVVMFTTVISGWCNAVKMQR 363
            I PD + ++ L  G  R G+   A          G V PN VM+T  + G   A + + 
Sbjct: 683 SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 742

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
            +   E+M  +G  P++ T   ++ GY    +  +  +LL  M  +   P  +T  ++  
Sbjct: 743 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 802

Query: 424 SW 425
            +
Sbjct: 803 GY 804



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/453 (22%), Positives = 196/453 (43%), Gaps = 43/453 (9%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA  + N + ++G  P ++TY+ L+    +  RFK+   ++ ++ + G+ P+
Sbjct: 453 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 512

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSG---------------CK------------ 96
            I+++ +I  C   G + EA++I++ M   G               CK            
Sbjct: 513 GIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 572

Query: 97  --------PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
                   P T +++ LI GYGN G+  ++  +   M++  +  P   TY  L++  C  
Sbjct: 573 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH-HPTFFTYGSLLKGLCKG 631

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
             + EA   +  + A     D V YNTL  A  + G   +A  +  EM    + P+  T 
Sbjct: 632 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 691

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELE----VHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             ++SG C++G    A+ F    KE E    V PN V++   + G               
Sbjct: 692 TSLISGLCRKGKTVIAILF---AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE 748

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M+  G  PD+VT + ++D +S  G + K  ++  +M      P++  ++IL  GY +  
Sbjct: 749 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 808

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           +   +  +  S+   G+ P+ +   +++ G C +  ++  + I +     G+  +  T+ 
Sbjct: 809 DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 868

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            L+       +   A +L++VM   G+   K T
Sbjct: 869 MLISKCCANGEINWAFDLVKVMTSLGISLDKDT 901



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/421 (22%), Positives = 184/421 (43%), Gaps = 9/421 (2%)

Query: 27   PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
            P  + YT  V  + +  ++K+ +    +++  G  PD +  NAMI+  S  G +++   +
Sbjct: 722  PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 781

Query: 87   FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
              +M +    P  +TYN L+ GY        S  L + +  +  + P+  T + LV   C
Sbjct: 782  LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN-GILPDKLTCHSLVLGIC 840

Query: 147  SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
              N +E    ++   +  G++ D  T+N L       GE   A  ++  M +  +  ++ 
Sbjct: 841  ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKD 900

Query: 207  TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
            TC  +VS   +    +++   L+ M +  + P    +  LI G   + D   +  A  + 
Sbjct: 901  TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD---IKTAFVVK 957

Query: 267  EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            EE     + P  V  S ++ A +  G   +   +   M+K  + P I  F+ L     + 
Sbjct: 958  EEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKN 1017

Query: 324  GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
            G   +A  +   M   G+  ++V +  +I+G C    M  A  +YE+M   G   N  TY
Sbjct: 1018 GNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTY 1077

Query: 384  ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            + L+ G    +  +   ++  ++++   R   +++ L  DS R + +A E  + L+S ++
Sbjct: 1078 KALIRGLLARETAFSGADI--ILKDLLARGFITSMSLSQDSHRNLKMAMEKLKALQSNKK 1135

Query: 444  D 444
            D
Sbjct: 1136 D 1136



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 138/321 (42%)

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           LM+  +    N   Y+IL+R +  +  I+++  +   M   G  P   T N +  +  + 
Sbjct: 152 LMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKS 211

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           GE       L EM   ++ P+  T  I+++  C EG+ E +   + +M++    P +V +
Sbjct: 212 GEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTY 271

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+++  +          + L  M+  GV  DV T++ ++     +  + K   +  DM K
Sbjct: 272 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 331

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
             I P+   ++ L  G+   G+   A  +L  M  +G+ PN V F  +I G  +    + 
Sbjct: 332 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 391

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+ ++  M   G+ P+  +Y  LL G  +  +   A      M+  GV   + T   + D
Sbjct: 392 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 451

Query: 424 SWRAIGLAREAKRVLKSAEED 444
                G   EA  +L    +D
Sbjct: 452 GLCKNGFLDEAVVLLNEMSKD 472



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 1/235 (0%)

Query: 16   IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
            ++  +I  G  P  +T  +LV  +      +  L ++      G++ D   FN +I+ C 
Sbjct: 816  LYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCC 875

Query: 76   ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
             +G ++ A  + + M   G      T + ++       + +ES  +L  MS+ + + P  
Sbjct: 876  ANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK-QGISPES 934

Query: 136  RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            R Y  L+   C    I+ A+ V  +M+A  I P  V  + + RA A+ G+   A  +L  
Sbjct: 935  RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRF 994

Query: 196  MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            M   ++ P   +   ++   CK GN+ +A+     M    +  +LV +N LI G 
Sbjct: 995  MLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1049



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 1/169 (0%)

Query: 11   HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
             E+  + + + ++G  P    Y  L+  L R    K+   +  ++    + P ++  +AM
Sbjct: 916  QESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAM 975

Query: 71   INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
            + A ++ G  DEA  + + M      PT +++ TL+      G   E+L+L  +MS +  
Sbjct: 976  VRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMS-NCG 1034

Query: 131  VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            +K +  +YN+L+   C+K  +  A+ +  +M   G   +A TY  L R 
Sbjct: 1035 LKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1083



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 49/101 (48%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            GK  EA  +   +++    PT+ ++TTL+    +       L L   +   G+K D + +
Sbjct: 983  GKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSY 1042

Query: 68   NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
            N +I      G++  A +++++MK  G     +TY  LI+G
Sbjct: 1043 NVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1083


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 201/382 (52%), Gaps = 8/382 (2%)

Query: 51  LISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG 110
           ++ ++E+ G+ P+ +++  +I+ C ++G+++   ++F KM +        TY  LI G+ 
Sbjct: 173 VLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFF 232

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
            +G  ++ ++L + M +   + PN  TYN ++   C+   +  A+ +  +M   G+  + 
Sbjct: 233 KMGLKKDGIELYEKM-KLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNV 291

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           VTYNTL     Q      AE+++  M+ + + PN  +   ++ GYC  GN++ A     +
Sbjct: 292 VTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQ 351

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
           MK     P+L  +N LI GF + K+S GV   +  ME  G+ P  VT++ +MDA   +  
Sbjct: 352 MKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDN 411

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           + K  +I+  M KAG+  DI+++ +L  G    G+ ++A  +  S+ +  + PN V++ T
Sbjct: 412 IEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNT 471

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I G+C      RA+ + ++M E G+ PN+ +Y + +    + ++   AE LL+ M E G
Sbjct: 472 MIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELG 531

Query: 411 VRPKKSTIQLVADSWRAIGLAR 432
           ++P  S        W  I  AR
Sbjct: 532 LKPSISI-------WNMISKAR 546



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 105/459 (22%), Positives = 206/459 (44%), Gaps = 50/459 (10%)

Query: 27  PT-LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           PT ++ +  ++ A  R +  +  L   +++   G+ P S  FN ++    +S   ++A +
Sbjct: 79  PTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWR 138

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +F + K +  K    ++  +IKG   VG  ++  ++L  M ++  + PN   Y  L+   
Sbjct: 139 VFNETKGN-VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQM-EEMGLSPNVVVYTTLIDGC 196

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C    IE    + YKM    +  +  TY  L   + + G      ++  +M+   + PN 
Sbjct: 197 CKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNV 256

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   ++   C +G + +A      M+E  V  N+V +N+LI G    +     ++ +  
Sbjct: 257 YTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCR 316

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY----- 320
           M+  G+ P++++++T++D + S G + K   +F+ M  +G  P +  ++IL  G+     
Sbjct: 317 MKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKN 376

Query: 321 ------------------------------VRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
                                         VR+   +KA  I +SM K G+  ++ ++  
Sbjct: 377 SAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGV 436

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I G C    M+ A  +++ + E+ + PN   Y T+++GY +    +RA  LL+ M E G
Sbjct: 437 LIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENG 496

Query: 411 VRPK----KSTIQLVA--DSWRAIGLAREAKRVLKSAEE 443
           + P      STI ++   + W       EA+ +LK   E
Sbjct: 497 MVPNVASYNSTIXILCKDEKW------TEAEVLLKDMIE 529



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 143/279 (51%), Gaps = 5/279 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK + A  +F+ + E G    ++TY TL+  L +++R      L+ ++++DG+ P+ I +
Sbjct: 270 GKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISY 329

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I+     GN+D+A  +F +MK SG  P+ +TYN LI G+           +++ M +
Sbjct: 330 NTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREM-E 388

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + + P+  TY IL+ A    ++IE+A+ +   M  +G+  D   Y  L       G+  
Sbjct: 389 ARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMK 448

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++   +    ++PN+     ++ GYCKEG+   A+R L  M E  + PN+  +NS I
Sbjct: 449 EASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTI 508

Query: 248 KGFLDIKDSDGVDKALTL--MEEFGVKPDVVTFSTIMDA 284
              +  KD    +  + L  M E G+KP +  ++ I  A
Sbjct: 509 X--ILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKA 545



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 154/324 (47%), Gaps = 36/324 (11%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           TYT L+    +    K  + L  K++  G+ P+   +N+MI  C   G ++ A ++F +M
Sbjct: 223 TYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEM 282

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
           ++ G      TYNTLI G     +  E+ +L+  M +D  + PN  +YN L+  +CS  +
Sbjct: 283 RERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRD-GLSPNLISYNTLIDGYCSIGN 341

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC-- 208
           +++A ++  +M +SG  P   TYN L   +++   +     M+ EM+   + P++ T   
Sbjct: 342 LDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTI 401

Query: 209 ---------------------------------GIIVSGYCKEGNMEDAMRFLYRMKELE 235
                                            G+++ G C  G+M++A +    + E+ 
Sbjct: 402 LMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMH 461

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           + PN V++N++I G+     S    + L  M E G+ P+V ++++ +          + +
Sbjct: 462 LKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAE 521

Query: 296 EIFDDMVKAGIEPDIHVFSILAKG 319
            +  DM++ G++P I ++++++K 
Sbjct: 522 VLLKDMIELGLKPSISIWNMISKA 545



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/359 (22%), Positives = 155/359 (43%), Gaps = 46/359 (12%)

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           E+A     +M+  G+ P + T+N L     +     +A ++  E + N V+ +  + GI+
Sbjct: 99  EQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGN-VKLDVYSFGIM 157

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           + G C+ G ++                         KGF          + L  MEE G+
Sbjct: 158 IKGCCEVGYLD-------------------------KGF----------EVLGQMEEMGL 182

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            P+VV ++T++D     G + + +++F  M +  +  + + +++L  G+ + G  +    
Sbjct: 183 SPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIE 242

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +   M+  G+ PNV  + ++I   CN  K+  A  ++++M E G+  N+ TY TL+ G  
Sbjct: 243 LYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLC 302

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
           + ++   AE L+  M+  G+ P   +   + D + +IG   +A  +    +   QS    
Sbjct: 303 QERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLA 362

Query: 452 KDEIAVESIHRKQNLSASNSTFLQIPGVVSSEHNGSSAAKIRSQIVL----RSDTVWTA 506
              I +      +N +           V   E  G S +K+   I++    RSD +  A
Sbjct: 363 TYNILIAGFSEAKNSAGVTDM------VREMEARGLSPSKVTYTILMDALVRSDNIEKA 415



 Score = 46.2 bits (108), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 70/144 (48%), Gaps = 1/144 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ LV      +A  I++ + + G    +  Y  L+  L      K    L   +++  +
Sbjct: 403 MDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHL 462

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP+ +++N MI    + G+   A+++ ++M ++G  P  ++YN+ I       K  E+  
Sbjct: 463 KPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEV 522

Query: 121 LLQLMSQDKNVKPNDRTYNILVRA 144
           LL+ M +   +KP+   +N++ +A
Sbjct: 523 LLKDMIE-LGLKPSISIWNMISKA 545


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 224/452 (49%), Gaps = 10/452 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G    A  +F+ L      P  ITY+TL+  L +Q R    L L+ ++ +  ++PD
Sbjct: 168 LCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPD 227

Query: 64  SILFNAMINACSESGNVDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
            + +NA++  C ++G  ++ M+++ K+ KD G +P  +TYN ++ G    G+ +E  ++ 
Sbjct: 228 VVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVW 287

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           + M  + N++P+  TY IL+   C    ++ A  V  +++ +G+  DA  YN+L + + Q
Sbjct: 288 ERMVAN-NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQ 346

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM-KELEVHPNLV 241
            G    A +         +R N RT  I++ G    G +++A+     + K++   P+ V
Sbjct: 347 AGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTV 405

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
            F +LI G      +   +KA T+ EE    G + DV ++S++++   + G +    +++
Sbjct: 406 TFGTLIHGLCQ---NGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVY 462

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           + M K G +P+ H+++ L  G+ +      A  I + M   G  P V+ + T+I G C A
Sbjct: 463 EKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKA 522

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            K Q A S+  +M E G  P++ TY +L+ G    K+   A  + + +  KG++      
Sbjct: 523 EKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMH 582

Query: 419 QLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            ++     + G   EA  V    +E +   PN
Sbjct: 583 NILIHGLCSAGKVDEALHVFSDMKEKKNCPPN 614



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 187/395 (47%), Gaps = 8/395 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P L TY  ++ +L  +      ++L   + +  + PD I ++ ++   ++   +D A+ +
Sbjct: 156 PNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDL 215

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M  S  +P    YN L+ G    G+ E+ +++   + +D   +PN  TYN+++   C
Sbjct: 216 LDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLC 275

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                +E   V  +MVA+ +QPD +TY  L     + G+   A ++  E+    +  +  
Sbjct: 276 KFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAA 335

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               +V G+C+ G +++A +F +         NL  +N +IKG     DS  VD+A+ L 
Sbjct: 336 MYNSLVKGFCQAGRVQEAWKF-WDSAGFAGLRNLRTYNIMIKGLF---DSGMVDEAIELW 391

Query: 267 E----EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           +    +    PD VTF T++      G   K   IF++   +G + D+  +S +  G   
Sbjct: 392 DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCN 451

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G    A  +   M K G  PN  ++  +ISG+C   +   A+ IY KM + G +P + T
Sbjct: 452 VGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVIT 511

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           Y TL+ G  +A++   A  + + M E G  P  +T
Sbjct: 512 YNTLIDGLCKAEKYQEASSVAREMVENGFTPDITT 546



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 92/407 (22%), Positives = 190/407 (46%), Gaps = 2/407 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  E   ++  ++    +P +ITY  L+  L R         + S++ K G+  D+ ++
Sbjct: 278 GRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMY 337

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N+++    ++G V EA K +     +G +    TYN +IKG  + G  +E+++L  L+ +
Sbjct: 338 NSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEK 396

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D    P+  T+  L+   C      +A+ +  +   SG Q D  +Y+++       G   
Sbjct: 397 DVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLV 456

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++  +M  +  +PN      ++SG+C+     DA+R   +M +    P ++ +N+LI
Sbjct: 457 DAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLI 516

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G    +           M E G  PD+ T+ +++    S   +     I+  ++  G++
Sbjct: 517 DGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLK 576

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMR-KYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            D+ + +IL  G   AG+  +A  + + M+ K    PN+V + T++ G      + +A +
Sbjct: 577 VDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAAT 636

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           ++  + E G+ P++ +Y T + G     +     +LL  +  +G+ P
Sbjct: 637 LWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIP 683



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 155/305 (50%), Gaps = 8/305 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P  +T+ TL+  L +        ++  +    G + D   +++MIN     G + +A+K+
Sbjct: 402 PDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKV 461

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           ++KM   GCKP +  YN LI G+  V +  +++++   M+ D    P   TYN L+   C
Sbjct: 462 YEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMA-DNGCSPTVITYNTLIDGLC 520

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                +EA +V  +MV +G  PD  TY +L R      +   A  +  ++    ++ +  
Sbjct: 521 KAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVM 580

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
              I++ G C  G +++A+     MKE +   PNLV +N+L+ G   + ++  +DKA TL
Sbjct: 581 MHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDG---LYETGYIDKAATL 637

Query: 266 ---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              + E G++PD+++++T +    S   + +  ++ D+++  GI P +  ++IL +  ++
Sbjct: 638 WTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697

Query: 323 AGEPQ 327
            G  Q
Sbjct: 698 YGPIQ 702



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/343 (22%), Positives = 158/343 (46%), Gaps = 39/343 (11%)

Query: 70  MINACSESGNVDEAMKIFQKMKD-SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           +++A S +   D A+  F+ +    GC P   ++N L+  +    +  ++      +S  
Sbjct: 89  VLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHG 148

Query: 129 ---KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
              + + PN +TYNI++R+ C++  ++ A  +   +    + PD +TY+TL    A+   
Sbjct: 149 AFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDR 208

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A  +L EM  ++V+P+      ++ G  K G  E  MR               V++ 
Sbjct: 209 LDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMR---------------VWDK 253

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           L+K                   + G +P++ T++ ++D     G   +  E+++ MV   
Sbjct: 254 LVK-------------------DPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANN 294

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           ++PD+  + IL  G  R+G+   A  + + + K G+  +  M+ +++ G+C A ++Q A 
Sbjct: 295 LQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAW 354

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
             ++     G+  NL+TY  ++ G  ++     A EL  ++E+
Sbjct: 355 KFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEK 396



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 106/211 (50%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  I++ + + G  PT+ITY TL+  L + ++++   S+  ++ ++G  PD   + ++I
Sbjct: 492 DAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLI 551

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                   +D+A+ I++++   G K     +N LI G  + GK +E+L +   M + KN 
Sbjct: 552 RGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNC 611

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PN  TYN L+        I++A  +   +   G++PD ++YNT  +        +   Q
Sbjct: 612 PPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQ 671

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNME 222
           +L E+ +  + P   T  I+V    K G ++
Sbjct: 672 LLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/284 (21%), Positives = 125/284 (44%), Gaps = 37/284 (13%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G  ++A  IF      G +  + +Y++++  L    R    + +  K++KDG KP+
Sbjct: 414 LCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPN 473

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTT------------------------ 99
           S ++NA+I+   +     +A++I+ KM D+GC PT                         
Sbjct: 474 SHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAR 533

Query: 100 -----------STYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
                      +TY +LI+G  +  K +++L + + +   K +K +   +NIL+   CS 
Sbjct: 534 EMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILY-KGLKVDVMMHNILIHGLCSA 592

Query: 149 NSIEEAWNVVYKMV-ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
             ++EA +V   M       P+ VTYNTL     + G   +A  +   +  + + P+  +
Sbjct: 593 GKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIIS 652

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
               + G C    + + ++ L  +    + P ++ +N L++  +
Sbjct: 653 YNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVI 696



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 4/150 (2%)

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK--YG--VHPNVVMFTTVISGWCNAVK 360
           G  P I   + L   +VRA     A++   S+    +G  + PN+  +  V+   C    
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           + RA+++++ +    + P+  TY TL+ G  +  +   A +LL  M    V+P       
Sbjct: 174 LDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNA 233

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           +       G   +  RV     +D  + PN
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPN 263


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 206/413 (49%), Gaps = 1/413 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG    A    N L  +G  PT+ TY  L+    +   F+++  L++++   G+  +  +
Sbjct: 253 KGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKV 312

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           FN +I+A  + G V EA ++ ++M + GC P  +TYN +I      G+ EE+ +LL+  +
Sbjct: 313 FNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLE-KA 371

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +++ + PN  +Y  L+ A+C K    +A  +++++   G + D V+Y          GE 
Sbjct: 372 KERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEI 431

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A  +  +M    V P+ +   I++SG CK+G +      L  M +  V P++ VF +L
Sbjct: 432 DVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATL 491

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I GF+   + D   K   ++   GV P +V ++ ++  +   G M       ++M     
Sbjct: 492 IDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHH 551

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD + +S +  GYV+  +   A  +   M K+   PNV+ +T++I+G+C    M RA  
Sbjct: 552 APDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEK 611

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           ++  M    + PN+ TY TL+ G+ +A +P RA  + ++M   G  P  +T  
Sbjct: 612 VFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFH 664



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 195/414 (47%), Gaps = 4/414 (0%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           + +++L+  L   + F  I  ++  ++   +KP    F+A+I A +ESG++D A+++F  
Sbjct: 96  VAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHT 155

Query: 90  MKD-SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN---VKPNDRTYNILVRAW 145
           +++   C PT    N L+ G    GK + +L+L   M Q  +      ++ T +I+V+  
Sbjct: 156 VREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGL 215

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C+   IEE   ++         P  V YN +   Y + G+   A + L E++   V P  
Sbjct: 216 CNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTV 275

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T G +++G+CK G  E   + L  M    ++ N+ VFN++I             + L  
Sbjct: 276 ETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRR 335

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M E G  PD+ T++ +++     G + +  E+ +   + G+ P+   ++ L   Y + G+
Sbjct: 336 MAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGD 395

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             KA  +L  + + G   ++V +   I G   A ++  A+ + EKM E G+ P+ + Y  
Sbjct: 396 YVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNI 455

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           L+ G  +  +    + LL  M ++ V+P       + D +   G   EA ++ K
Sbjct: 456 LMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFK 509



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/371 (21%), Positives = 166/371 (44%), Gaps = 15/371 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+    KG   +A  +   + E G +  L++Y   +  +         L +  K+ + G+
Sbjct: 387 MHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGV 446

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD+ ++N +++   + G +     +  +M D   +P    + TLI G+   G+ +E++K
Sbjct: 447 FPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIK 506

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + +++ + K V P    YN +++ +C    + +A + + +M +    PD  TY+T+   Y
Sbjct: 507 IFKVIIR-KGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGY 565

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +   A +M  +M  ++ +PN  T   +++G+CK+ +M  A +    MK  ++ PN+
Sbjct: 566 VKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNV 625

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE---- 296
           V + +L+ GF      +       LM   G  P+  TF  +++  ++        E    
Sbjct: 626 VTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDS 685

Query: 297 ----------IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
                      F  M+  G +  I  ++ +     + G    A+ +LT M   G   + V
Sbjct: 686 KENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSV 745

Query: 347 MFTTVISGWCN 357
            FT ++ G C+
Sbjct: 746 CFTALLHGLCH 756



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/334 (21%), Positives = 136/334 (40%), Gaps = 22/334 (6%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L  KG+      + + +++   +P +  + TL+    R       + +   + + G+
Sbjct: 457 MSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGV 516

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + +NAMI    + G + +A+    +M      P   TY+T+I GY        +LK
Sbjct: 517 DPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALK 576

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M + K  KPN  TY  L+  +C K  +  A  V   M +  + P+ VTY TL   +
Sbjct: 577 MFGQMMKHK-FKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGF 635

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+  RA  +   M  N   PN+ T   +++G                ++E +   N 
Sbjct: 636 FKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSP------VLIEEKDSKENE 689

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
               SLI  F  +   DG D+             +  +++++      G +   Q +   
Sbjct: 690 ---RSLILDFFTMMLLDGWDQV------------IAAYNSVIVCLCKHGTVDTAQLLLTK 734

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           M+  G   D   F+ L  G    G+ ++  +I++
Sbjct: 735 MLTKGFLIDSVCFTALLHGLCHKGKSKEWRNIIS 768


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 197/403 (48%), Gaps = 6/403 (1%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           Y  L+ AL R+    +++ +   + KDG+ P+   +N ++ A  ++  V  A K+  +M 
Sbjct: 131 YNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMA 190

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
             GC P   TY T++     + + +E+ ++L  M       P   +YN +V A C +  +
Sbjct: 191 RKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM------PPVAASYNAIVLALCREFRM 244

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           +E ++VV  MV  G+QP+ +TY T+  A+ + GE   A  +L  M      PN  T   +
Sbjct: 245 QEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTAL 304

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           V G   +G + DA+     M      P+ V +N LI+G   + D  G    L  ME+ G 
Sbjct: 305 VRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGC 364

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            P+V T+ST++D +S AG +G    I++DM ++G +P++ V++ +   + +     +A+S
Sbjct: 365 FPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKS 424

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           ++  M      PN V F T+I   C+  ++ RA+ ++ +M   G  PN +TY  L+ G  
Sbjct: 425 LIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLF 484

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
                  A  ++  M+  G+     T   V        ++REA
Sbjct: 485 REGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREA 527



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 176/370 (47%), Gaps = 1/370 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G +P +ITYTT+V A  +    +   ++++++   G  P+ + F A++    + G 
Sbjct: 254 MVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGR 313

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V +A+ +++ M   G  P+T +YN LI+G  +VG  + +  +L  M Q     PN RTY+
Sbjct: 314 VHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQ-HGCFPNVRTYS 372

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+  +     +  A ++   M  SG +P+ V Y  +   + +     +A+ ++ +M   
Sbjct: 373 TLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLE 432

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              PN  T   ++   C    +  A+   + M+     PN   +N LI G     +    
Sbjct: 433 NCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDA 492

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
              +T M+  G++  +VT++T++       +  +       M+  GI+P+   FS +   
Sbjct: 493 LHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHA 552

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y + GE + A  +L +M     H N++++T +++  CN  K+  AM+   KM   GI PN
Sbjct: 553 YCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPN 612

Query: 380 LKTYETLLWG 389
             T+  L+ G
Sbjct: 613 TVTWNVLVRG 622



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/407 (23%), Positives = 187/407 (45%), Gaps = 8/407 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   +Y  +V AL R+ R + + S++S +   G++P+ I +  +++A  ++G +  A  I
Sbjct: 226 PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAI 285

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M  +GC P   T+  L++G  + G+  ++L + + M  +    P+  +YNIL+R  C
Sbjct: 286 LARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAE-GWAPSTVSYNILIRGLC 344

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           S   ++ A +++  M   G  P+  TY+TL   +++ G+   A  +  +M  +  +PN  
Sbjct: 345 SVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVV 404

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               +V  +CK+     A   + +M      PN V FN+LI+   D +    V +AL + 
Sbjct: 405 VYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRR---VGRALGVF 461

Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            E    G  P+  T++ ++      G  G    +  +M   GIE  +  ++ +  G  + 
Sbjct: 462 HEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQT 521

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
              ++A   +  M   G+ PN   F+ +I  +C   +++ A  +   M  +  + N+  Y
Sbjct: 522 RMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVY 581

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ-LVADSWRAIG 429
             L+       +   A   L  M  +G+ P   T   LV   +R +G
Sbjct: 582 TILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLG 628



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 146/319 (45%), Gaps = 1/319 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+ H+A  ++  ++ EG  P+ ++Y  L+  L      K   S+++ +E+ G  P+
Sbjct: 308 LFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPN 367

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              ++ +I+  S++G++  A+ I+  M  SGCKP    Y  ++  +       ++  L+ 
Sbjct: 368 VRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLID 427

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  + N  PN  T+N L+R+ C    +  A  V ++M   G  P+  TYN L     + 
Sbjct: 428 KMLLE-NCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFRE 486

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A  M+ EMQ++ +  +  T   +VSG C+     +AM F+ +M    + PN   F
Sbjct: 487 GNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTF 546

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           +++I  +    +       L  M       +++ ++ +M    +   +         M+ 
Sbjct: 547 SAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLY 606

Query: 304 AGIEPDIHVFSILAKGYVR 322
            GI P+   +++L +G  R
Sbjct: 607 EGIYPNTVTWNVLVRGVFR 625



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/351 (21%), Positives = 152/351 (43%), Gaps = 23/351 (6%)

Query: 179 AYAQYGETYRAEQMLFEMQNNQ--VRPNE-RTCGIIVSGYCKEGNMEDAMRFLY-RMKEL 234
           A+A+ G   RA +  +   ++    RP E R    ++    +E NM  A+  +Y  M++ 
Sbjct: 99  AFARAGAPDRALKTFYRAVHDLGCARPTEPRLYNHLIDALLRE-NMVGAVVLVYDNMRKD 157

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            VHPN+  +N L++            K L  M   G  PD VT++TI+        + + 
Sbjct: 158 GVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEA 217

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
            E+      A + P    ++ +     R    Q+  S+++ M   G+ PNV+ +TT++  
Sbjct: 218 TEVL-----AAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDA 272

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
           +C A +++ A +I  +M   G  PN+ T+  L+ G  +  +   A ++ + M  +G  P 
Sbjct: 273 FCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPS 332

Query: 415 KSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKD-EIAVESIHRKQNLSASNSTF 473
             +  ++     ++G  + A  +L S E+     PN +     ++   +  +L  + S +
Sbjct: 333 TVSYNILIRGLCSVGDLKGASSILNSMEQ-HGCFPNVRTYSTLIDGFSKAGDLGGAISIW 391

Query: 474 LQIPGVVSSEHNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQPMVV 524
                      N  S +  +  +V+ ++ V    K L  N   S +  M++
Sbjct: 392 -----------NDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLL 431


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 214/432 (49%), Gaps = 1/432 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   ++  IF  +   G  P++ T   ++ ++ +     S+ S + ++ K  + PD   
Sbjct: 136 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVAT 195

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           FN +IN     G+ +++  + QKM+ SG  PT  TYNT++  Y   G+ + +++LL  M 
Sbjct: 196 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM- 254

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + K V  +  TYN+L+   C  N I + + ++  M    I P+ VTYNTL   ++  G+ 
Sbjct: 255 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 314

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A Q+L EM +  + PN  T   ++ G+  EGN ++A++  Y M+   + P+ V +  L
Sbjct: 315 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 374

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + G     + D        M+  GV    +T++ ++D     G + +   + ++M K GI
Sbjct: 375 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI 434

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           +PDI  +S L  G+ + G  + A+ I+  + + G+ PN ++++T+I   C    ++ A+ 
Sbjct: 435 DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIR 494

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           IYE M   G   +  T+  L+    +A +   AEE ++ M   G+ P   +   + + + 
Sbjct: 495 IYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYG 554

Query: 427 AIGLAREAKRVL 438
             G   +A  V 
Sbjct: 555 NSGEGLKAFSVF 566



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 202/407 (49%), Gaps = 1/407 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+L  +G   ++ Y+   + + G+ PT++TY T++    ++ RFK+ + L+  ++  G+
Sbjct: 200 INVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV 259

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D   +N +I+    S  + +   + + M+     P   TYNTLI G+ N GK   + +
Sbjct: 260 DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQ 319

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M     + PN  T+N L+    S+ + +EA  + Y M A G+ P  V+Y  L    
Sbjct: 320 LLNEM-LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 378

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  E   A      M+ N V     T   ++ G CK G +++A+  L  M +  + P++
Sbjct: 379 CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 438

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +++LI GF  +       + +  +   G+ P+ + +ST++      G + +   I++ 
Sbjct: 439 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 498

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  G   D   F++L     +AG+  +AE  +  M   G+ PN V F  +I+G+ N+ +
Sbjct: 499 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 558

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
             +A S++++M ++G +P   TY +LL G  +      AE+ L+ + 
Sbjct: 559 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/422 (23%), Positives = 190/422 (45%), Gaps = 2/422 (0%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           + +G   EA  +F  +  +G  P+ ++Y  L+  L +   F        +++++G+    
Sbjct: 344 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 403

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           I +  MI+   ++G +DEA+ +  +M   G  P   TY+ LI G+  VG+ + + +++  
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           + +   + PN   Y+ L+   C    ++EA  +   M+  G   D  T+N L  +  + G
Sbjct: 464 IYR-VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 522

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +   AE+ +  M ++ + PN  +   +++GY   G    A      M ++  HP    + 
Sbjct: 523 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 582

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           SL+KG          +K L  +       D V ++T++ A   +G + K   +F +MV+ 
Sbjct: 583 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 642

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG-VHPNVVMFTTVISGWCNAVKMQR 363
            I PD + ++ L  G  R G+   A          G V PN VM+T  + G   A + + 
Sbjct: 643 SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 702

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
            +   E+M  +G  P++ T   ++ GY    +  +  +LL  M  +   P  +T  ++  
Sbjct: 703 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 762

Query: 424 SW 425
            +
Sbjct: 763 GY 764



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/453 (22%), Positives = 196/453 (43%), Gaps = 43/453 (9%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA  + N + ++G  P ++TY+ L+    +  RFK+   ++ ++ + G+ P+
Sbjct: 413 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 472

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSG---------------CK------------ 96
            I+++ +I  C   G + EA++I++ M   G               CK            
Sbjct: 473 GIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 532

Query: 97  --------PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
                   P T +++ LI GYGN G+  ++  +   M++  +  P   TY  L++  C  
Sbjct: 533 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH-HPTFFTYGSLLKGLCKG 591

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
             + EA   +  + A     D V YNTL  A  + G   +A  +  EM    + P+  T 
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELE----VHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             ++SG C++G    A+ F    KE E    V PN V++   + G               
Sbjct: 652 TSLISGLCRKGKTVIAILF---AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE 708

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M+  G  PD+VT + ++D +S  G + K  ++  +M      P++  ++IL  GY +  
Sbjct: 709 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 768

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           +   +  +  S+   G+ P+ +   +++ G C +  ++  + I +     G+  +  T+ 
Sbjct: 769 DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 828

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            L+       +   A +L++VM   G+   K T
Sbjct: 829 MLISKCCANGEINWAFDLVKVMTSLGISLDKDT 861



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/417 (22%), Positives = 181/417 (43%), Gaps = 9/417 (2%)

Query: 27   PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
            P  + YT  V  + +  ++K+ +    +++  G  PD +  NAMI+  S  G +++   +
Sbjct: 682  PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 741

Query: 87   FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
              +M +    P  +TYN L+ GY        S  L + +  +  + P+  T + LV   C
Sbjct: 742  LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN-GILPDKLTCHSLVLGIC 800

Query: 147  SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
              N +E    ++   +  G++ D  T+N L       GE   A  ++  M +  +  ++ 
Sbjct: 801  ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKD 860

Query: 207  TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
            TC  +VS   +    +++   L+ M +  + P    +  LI G   + D   +  A  + 
Sbjct: 861  TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD---IKTAFVVK 917

Query: 267  EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            EE     + P  V  S ++ A +  G   +   +   M+K  + P I  F+ L     + 
Sbjct: 918  EEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKN 977

Query: 324  GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
            G   +A  +   M   G+  ++V +  +I+G C    M  A  +YE+M   G   N  TY
Sbjct: 978  GNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTY 1037

Query: 384  ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            + L+ G    +  +   ++  ++++   R   +++ L  DS R + +A E  + L++
Sbjct: 1038 KALIRGLLARETAFSGADI--ILKDLLARGFITSMSLSQDSHRNLKMAMEKLKALQN 1092



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 138/321 (42%)

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           LM+  +    N   Y+IL+R +  +  I+++  +   M   G  P   T N +  +  + 
Sbjct: 112 LMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKS 171

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           GE       L EM   ++ P+  T  I+++  C EG+ E +   + +M++    P +V +
Sbjct: 172 GEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTY 231

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+++  +          + L  M+  GV  DV T++ ++     +  + K   +  DM K
Sbjct: 232 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 291

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
             I P+   ++ L  G+   G+   A  +L  M  +G+ PN V F  +I G  +    + 
Sbjct: 292 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+ ++  M   G+ P+  +Y  LL G  +  +   A      M+  GV   + T   + D
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411

Query: 424 SWRAIGLAREAKRVLKSAEED 444
                G   EA  +L    +D
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKD 432



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 1/235 (0%)

Query: 16   IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
            ++  +I  G  P  +T  +LV  +      +  L ++      G++ D   FN +I+ C 
Sbjct: 776  LYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCC 835

Query: 76   ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
             +G ++ A  + + M   G      T + ++       + +ES  +L  MS+ + + P  
Sbjct: 836  ANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK-QGISPES 894

Query: 136  RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            R Y  L+   C    I+ A+ V  +M+A  I P  V  + + RA A+ G+   A  +L  
Sbjct: 895  RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRF 954

Query: 196  MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            M   ++ P   +   ++   CK GN+ +A+     M    +  +LV +N LI G 
Sbjct: 955  MLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 1/169 (0%)

Query: 11   HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
             E+  + + + ++G  P    Y  L+  L R    K+   +  ++    + P ++  +AM
Sbjct: 876  QESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAM 935

Query: 71   INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
            + A ++ G  DEA  + + M      PT +++ TL+      G   E+L+L  +MS +  
Sbjct: 936  VRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMS-NCG 994

Query: 131  VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            +K +  +YN+L+   C+K  +  A+ +  +M   G   +A TY  L R 
Sbjct: 995  LKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 49/101 (48%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            GK  EA  +   +++    PT+ ++TTL+    +       L L   +   G+K D + +
Sbjct: 943  GKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSY 1002

Query: 68   NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
            N +I      G++  A +++++MK  G     +TY  LI+G
Sbjct: 1003 NVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 210/419 (50%), Gaps = 1/419 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   ++  IF  +   G  P++ T   ++ ++ +     S+ S + ++ K  + PD   
Sbjct: 136 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVAT 195

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           FN +IN     G+ +++  + QKM+ SG  PT  TYNT++  Y   G+ + +++LL  M 
Sbjct: 196 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM- 254

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + K V  +  TYN+L+   C  N I + + ++  M    I P+ VTYNTL   ++  G+ 
Sbjct: 255 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 314

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A Q+L EM +  + PN  T   ++ G+  EGN ++A++  Y M+   + P+ V +  L
Sbjct: 315 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 374

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + G     + D        M+  GV    +T++ ++D     G + +   + ++M K GI
Sbjct: 375 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI 434

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           +PDI  +S L  G+ + G  + A+ I+  + + G+ PN ++++T+I   C    ++ A+ 
Sbjct: 435 DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIR 494

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           IYE M   G   +  T+  L+    +A +   AEE ++ M   G+ P   +   + + +
Sbjct: 495 IYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 553



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 202/407 (49%), Gaps = 1/407 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+L  +G   ++ Y+   + + G+ PT++TY T++    ++ RFK+ + L+  ++  G+
Sbjct: 200 INVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV 259

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D   +N +I+    S  + +   + + M+     P   TYNTLI G+ N GK   + +
Sbjct: 260 DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQ 319

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M     + PN  T+N L+    S+ + +EA  + Y M A G+ P  V+Y  L    
Sbjct: 320 LLNEM-LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 378

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  E   A      M+ N V     T   ++ G CK G +++A+  L  M +  + P++
Sbjct: 379 CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 438

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +++LI GF  +       + +  +   G+ P+ + +ST++      G + +   I++ 
Sbjct: 439 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 498

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  G   D   F++L     +AG+  +AE  +  M   G+ PN V F  +I+G+ N+ +
Sbjct: 499 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 558

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
             +A S++++M ++G +P   TY +LL G  +      AE+ L+ + 
Sbjct: 559 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/422 (23%), Positives = 190/422 (45%), Gaps = 2/422 (0%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           + +G   EA  +F  +  +G  P+ ++Y  L+  L +   F        +++++G+    
Sbjct: 344 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 403

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           I +  MI+   ++G +DEA+ +  +M   G  P   TY+ LI G+  VG+ + + +++  
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           + +   + PN   Y+ L+   C    ++EA  +   M+  G   D  T+N L  +  + G
Sbjct: 464 IYR-VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 522

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +   AE+ +  M ++ + PN  +   +++GY   G    A      M ++  HP    + 
Sbjct: 523 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 582

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           SL+KG          +K L  +       D V ++T++ A   +G + K   +F +MV+ 
Sbjct: 583 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 642

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG-VHPNVVMFTTVISGWCNAVKMQR 363
            I PD + ++ L  G  R G+   A          G V PN VM+T  + G   A + + 
Sbjct: 643 SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 702

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
            +   E+M  +G  P++ T   ++ GY    +  +  +LL  M  +   P  +T  ++  
Sbjct: 703 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 762

Query: 424 SW 425
            +
Sbjct: 763 GY 764



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/453 (22%), Positives = 196/453 (43%), Gaps = 43/453 (9%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA  + N + ++G  P ++TY+ L+    +  RFK+   ++ ++ + G+ P+
Sbjct: 413 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 472

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSG---------------CK------------ 96
            I+++ +I  C   G + EA++I++ M   G               CK            
Sbjct: 473 GIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 532

Query: 97  --------PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
                   P T +++ LI GYGN G+  ++  +   M++  +  P   TY  L++  C  
Sbjct: 533 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH-HPTFFTYGSLLKGLCKG 591

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
             + EA   +  + A     D V YNTL  A  + G   +A  +  EM    + P+  T 
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELE----VHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             ++SG C++G    A+ F    KE E    V PN V++   + G               
Sbjct: 652 TSLISGLCRKGKTVIAILF---AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE 708

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M+  G  PD+VT + ++D +S  G + K  ++  +M      P++  ++IL  GY +  
Sbjct: 709 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 768

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           +   +  +  S+   G+ P+ +   +++ G C +  ++  + I +     G+  +  T+ 
Sbjct: 769 DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 828

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            L+       +   A +L++VM   G+   K T
Sbjct: 829 MLISKCCANGEINWAFDLVKVMTSLGISLDKDT 861



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/421 (22%), Positives = 184/421 (43%), Gaps = 9/421 (2%)

Query: 27   PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
            P  + YT  V  + +  ++K+ +    +++  G  PD +  NAMI+  S  G +++   +
Sbjct: 682  PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 741

Query: 87   FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
              +M +    P  +TYN L+ GY        S  L + +  +  + P+  T + LV   C
Sbjct: 742  LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN-GILPDKLTCHSLVLGIC 800

Query: 147  SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
              N +E    ++   +  G++ D  T+N L       GE   A  ++  M +  +  ++ 
Sbjct: 801  ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKD 860

Query: 207  TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
            TC  +VS   +    +++   L+ M +  + P    +  LI G   + D   +  A  + 
Sbjct: 861  TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD---IKTAFVVK 917

Query: 267  EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            EE     + P  V  S ++ A +  G   +   +   M+K  + P I  F+ L     + 
Sbjct: 918  EEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKN 977

Query: 324  GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
            G   +A  +   M   G+  ++V +  +I+G C    M  A  +YE+M   G   N  TY
Sbjct: 978  GNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTY 1037

Query: 384  ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            + L+ G    +  +   ++  ++++   R   +++ L  DS R + +A E  + L+S ++
Sbjct: 1038 KALIRGLLARETAFSGADI--ILKDLLARGFITSMSLSQDSHRNLKMAMEKLKALQSNKK 1095

Query: 444  D 444
            D
Sbjct: 1096 D 1096



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 138/321 (42%)

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           LM+  +    N   Y+IL+R +  +  I+++  +   M   G  P   T N +  +  + 
Sbjct: 112 LMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKS 171

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           GE       L EM   ++ P+  T  I+++  C EG+ E +   + +M++    P +V +
Sbjct: 172 GEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTY 231

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+++  +          + L  M+  GV  DV T++ ++     +  + K   +  DM K
Sbjct: 232 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 291

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
             I P+   ++ L  G+   G+   A  +L  M  +G+ PN V F  +I G  +    + 
Sbjct: 292 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+ ++  M   G+ P+  +Y  LL G  +  +   A      M+  GV   + T   + D
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411

Query: 424 SWRAIGLAREAKRVLKSAEED 444
                G   EA  +L    +D
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKD 432



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 1/235 (0%)

Query: 16   IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
            ++  +I  G  P  +T  +LV  +      +  L ++      G++ D   FN +I+ C 
Sbjct: 776  LYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCC 835

Query: 76   ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
             +G ++ A  + + M   G      T + ++       + +ES  +L  MS+ + + P  
Sbjct: 836  ANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK-QGISPES 894

Query: 136  RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            R Y  L+   C    I+ A+ V  +M+A  I P  V  + + RA A+ G+   A  +L  
Sbjct: 895  RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRF 954

Query: 196  MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            M   ++ P   +   ++   CK GN+ +A+     M    +  +LV +N LI G 
Sbjct: 955  MLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 1/169 (0%)

Query: 11   HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
             E+  + + + ++G  P    Y  L+  L R    K+   +  ++    + P ++  +AM
Sbjct: 876  QESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAM 935

Query: 71   INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
            + A ++ G  DEA  + + M      PT +++ TL+      G   E+L+L  +MS +  
Sbjct: 936  VRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMS-NCG 994

Query: 131  VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            +K +  +YN+L+   C+K  +  A+ +  +M   G   +A TY  L R 
Sbjct: 995  LKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 49/101 (48%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            GK  EA  +   +++    PT+ ++TTL+    +       L L   +   G+K D + +
Sbjct: 943  GKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSY 1002

Query: 68   NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
            N +I      G++  A +++++MK  G     +TY  LI+G
Sbjct: 1003 NVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 219/446 (49%), Gaps = 10/446 (2%)

Query: 1   MNILVGKGKPHEAHY---IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           +N LV     H   +    FN  I+ G  P + T+  ++     + +FK  +  ++ + K
Sbjct: 177 LNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGK 236

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
               PD++ +N +++   + G + +A  +   MK  G  P  +TYN L+ GY  +G  +E
Sbjct: 237 YNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKE 296

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +  +++LM+Q+ N+ P+  TYN+L+   C++  IEEA+ +  +M    + PD V+YNTL 
Sbjct: 297 AANVIELMTQN-NLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLI 355

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               ++ +   A ++L EM    V+PN  T  I+V  YCKEG M+DA   + +M+E    
Sbjct: 356 NGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFS 415

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG---VKPDVVTFSTIMDAWSSAGLMGKC 294
           P+ V +N+LI G+     +  + +A   M+E G   +K D VT +TI+        + + 
Sbjct: 416 PDCVTYNTLINGYC---KAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEA 472

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
            ++     K G   D   +  L  GY + G   +A  +   M++  + P+ V +  +I G
Sbjct: 473 YKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGG 532

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C   K ++A+S   ++ E G+ P+  TY T+L GY       +A +    M E   +P 
Sbjct: 533 LCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPD 592

Query: 415 KSTIQLVADSWRAIGLAREAKRVLKS 440
             T  ++       G+  +A ++  +
Sbjct: 593 VFTCNILLRGLCMEGVLEKALKLFNT 618



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 220/454 (48%), Gaps = 8/454 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  KG+  +A  +   +   G  P   TY  LV    +    K   ++I  + ++ +
Sbjct: 250 LDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNL 309

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +N +IN     G ++EA K+  +M++    P   +YNTLI G     K  E+ K
Sbjct: 310 LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFK 369

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ MS+ K VKPN  T+NI+V+ +C +  +++A N + KM  SG  PD VTYNTL   Y
Sbjct: 370 LLEEMSE-KGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGY 428

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A + + EM    ++ +  T   I+   C+E  +E+A + L   ++     + 
Sbjct: 429 CKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDE 488

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V + +LI G+   KD + VD+AL L   M+E  + P  VT++ I+      G   +    
Sbjct: 489 VSYGTLIVGYF--KDGN-VDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISK 545

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            ++++++G+ PD   ++ +  GY R G+ +KA      M +    P+V     ++ G C 
Sbjct: 546 LNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCM 605

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              +++A+ ++      G   +  TY TL+    +  +   A  LL  MEEK + P   T
Sbjct: 606 EGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYT 665

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
              +  +    G  REA+  +    E + ++P++
Sbjct: 666 YNAIITALTDSGRIREAEEFMSKMLE-KGNLPDQ 698



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 201/424 (47%), Gaps = 4/424 (0%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSI---LSLISKVEKDGMK 61
           V  G+PH A  IF  +     RP L+T  TL+ +L R     S+       +   K G+ 
Sbjct: 146 VQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIV 205

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P+   FN +I          +A++    M    C P   TYNT++      G+  ++  L
Sbjct: 206 PNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDL 265

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           L  M + + + PN  TYNILV  +C    ++EA NV+  M  + + PD  TYN L     
Sbjct: 266 LMDM-KSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLC 324

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
             G    A ++  EM+N ++ P+  +   +++G  +   + +A + L  M E  V PN V
Sbjct: 325 NEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAV 384

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
             N ++K +      D     +T MEE G  PD VT++T+++ +  AG MG+     D+M
Sbjct: 385 THNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEM 444

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
            +  ++ D    + + +   R  + ++A  +L+S RK G   + V + T+I G+     +
Sbjct: 445 GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNV 504

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            RA+ ++++M E  I P+  TY  ++ G  +  +  +A   L  + E G+ P ++T   +
Sbjct: 505 DRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTI 564

Query: 422 ADSW 425
              +
Sbjct: 565 LHGY 568



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/451 (24%), Positives = 197/451 (43%), Gaps = 67/451 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  EA  + + +      P +++Y TL+       +      L+ ++ + G+
Sbjct: 320 INGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGV 379

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP+++  N M+    + G +D+A     KM++SG  P   TYNTLI GY   G   E+ +
Sbjct: 380 KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFR 439

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG--------------- 165
            +  M + KN+K +  T N ++R  C +  +EEA+ ++      G               
Sbjct: 440 TMDEMGR-KNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGY 498

Query: 166 --------------------IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                               I P  VTYN +     Q G+T +A   L E+  + + P+E
Sbjct: 499 FKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDE 558

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV-DKALT 264
            T   I+ GYC+EG++E A +F  +M E    P++   N L++G       +GV +KAL 
Sbjct: 559 TTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLC----MEGVLEKALK 614

Query: 265 LMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           L   +   G   D VT++T++ +    G +     +  +M +  + PD + ++ +     
Sbjct: 615 LFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALT 674

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVM-----------------------FTTVISGWCNA 358
            +G  ++AE  ++ M + G  P+ V+                       ++  I   C  
Sbjct: 675 DSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTE 734

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
            K + AM I+ +  + GI  +  TY  L+ G
Sbjct: 735 GKYKDAMRIFGESKQKGITVDKSTYINLMDG 765



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 145/280 (51%), Gaps = 5/280 (1%)

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG---YCKEGNMEDA 224
           P     +T   AY Q G+ + A Q+  +M+  ++RPN  TC  +++    Y    ++  +
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGF-LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD 283
                   +L + PN+  FN +I G+ L+ K  D V+  L +M ++   PD VT++TI+D
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVE-FLNVMGKYNCSPDNVTYNTILD 251

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
                G +G  +++  DM   G+ P+ + ++IL  GY + G  ++A +++  M +  + P
Sbjct: 252 TLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLP 311

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           +V  +  +I+G CN  +++ A  + ++M  + + P++ +Y TL+ G  E  +   A +LL
Sbjct: 312 DVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLL 371

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           + M EKGV+P   T  ++   +   G   +A   +   EE
Sbjct: 372 EEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEE 411



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 155/348 (44%), Gaps = 15/348 (4%)

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           L +L+L S      P+    +  + A+        A+ +  KM    ++P+ +T NTL  
Sbjct: 125 LSILRLTS------PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLN 178

Query: 179 AYAQYGETYRAEQMLFEMQNNQVR----PNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           +  +Y  ++       E  N+ ++    PN  T  I++ GYC E   +DA+ FL  M + 
Sbjct: 179 SLVRYPSSHSV-SFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKY 237

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
              P+ V +N+++               L  M+  G+ P+  T++ ++  +   G + + 
Sbjct: 238 NCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEA 297

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
             + + M +  + PD+  +++L  G    G  ++A  +   M    + P+VV + T+I+G
Sbjct: 298 ANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLING 357

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
                K+  A  + E+M E G+ PN  T+  ++  Y +  +   A   +  MEE G  P 
Sbjct: 358 CLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPD 417

Query: 415 KSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHR 462
             T   + + +   G   EA R +   E  R++M  K D + + +I R
Sbjct: 418 CVTYNTLINGYCKAGNMGEAFRTMD--EMGRKNM--KMDSVTLNTILR 461



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 118/254 (46%), Gaps = 26/254 (10%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P+ +TY  ++  L +  + +  +S ++++ + G+ PD   +N +++     G+V++A + 
Sbjct: 521 PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQF 580

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL-MSQDKNVKPNDRTYNILVRAW 145
             KM ++  KP   T N L++G    G  E++LKL    +S+ K +  +  TYN L+ + 
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAI--DTVTYNTLITSL 638

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM--------Q 197
           C +  +++A+N++ +M    + PD  TYN +  A    G    AE+ + +M        Q
Sbjct: 639 CKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQ 698

Query: 198 NNQVRPNERTCGII---------------VSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
             Q+  NE                     +   C EG  +DAMR     K+  +  +   
Sbjct: 699 VLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKST 758

Query: 243 FNSLIKGFLDIKDS 256
           + +L+ G +  + S
Sbjct: 759 YINLMDGLIKRRKS 772


>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
 gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 205/410 (50%), Gaps = 5/410 (1%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           +++ L ++ +     SL++ + KDG   D   + ++I AC  +G   EA+ +F+KM++ G
Sbjct: 4   IISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
           CKPT  TYN ++  YG +G P   +K L    ++  V P++ TYN L+   C + S+ E 
Sbjct: 64  CKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLI-TCCRRGSLHEE 122

Query: 155 WNVVYK-MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
              V+K M + G  PD VTYN L   Y +   T  A ++L EM+ N   P+  T   ++S
Sbjct: 123 AAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLIS 182

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
            Y ++G +++AM    +M E  ++ ++  + +L+ GF+     +   +    M   G KP
Sbjct: 183 AYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKP 242

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           ++ TF+ ++    + G   +  ++F+++  +   PDI  ++ L   + + G   +   + 
Sbjct: 243 NICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVF 302

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M++ G  P    + T+IS +       +AM IY++M E GI P+L TY  +L      
Sbjct: 303 KEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARG 362

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
               ++E++   M++   +P + T         A    +E  R+L  AEE
Sbjct: 363 GLWEQSEKIFAEMKDGRCKPNELT---YCSLLHAYANGKEIGRMLALAEE 409



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 215/423 (50%), Gaps = 11/423 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA  + N ++E G    + TYTTL++   R  + +S + + +++   G KP+   F
Sbjct: 188 GLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTF 247

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           NA+I      G   E MK+F+++K+S C P   T+NTL+  +G  G   E   + + M +
Sbjct: 248 NALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 307

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              V P   TYN L+ A+    S ++A ++  +M+ +GI PD  TYN +  A A+ G   
Sbjct: 308 AGFV-PERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWE 366

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL---EVHPNLVVFN 244
           ++E++  EM++ + +PNE T   ++  Y    N ++  R L   +E+    + P+ V+  
Sbjct: 367 QSEKIFAEMKDGRCKPNELTYCSLLHAY---ANGKEIGRMLALAEEICSGVIEPHAVLLK 423

Query: 245 SLIKGFLDIKDSDGVDKALTLME--EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +L+   ++ K    V+  +  +E    G  PD+ T + ++  +    +  K  EI + M 
Sbjct: 424 TLV--LVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMN 481

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           ++G  P +  ++ L   + R+   +++E +L  +   G+ P+ + + TVI  +C   +M+
Sbjct: 482 ESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMK 541

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A  I+ +M E G+ P++ TY T +  Y        A ++++ M + G +P ++T   V 
Sbjct: 542 EASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVV 601

Query: 423 DSW 425
           D +
Sbjct: 602 DGY 604



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 214/455 (47%), Gaps = 37/455 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L  +GK   A  + N L ++G    +  YT+L+ A     R++  + +  K+E++G 
Sbjct: 5   ISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEGC 64

Query: 61  KPDSILFNAMINACSESGNVDEAMK-IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           KP  I +N ++N   + G     +K +F+ MK++G  P   TYNTLI         EE+ 
Sbjct: 65  KPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAA 124

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            + + M +     P+  TYN L+  +      +EA  V+ +M  +G  P  VTYN+L  A
Sbjct: 125 AVFKDM-KSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISA 183

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           YA+ G    A ++  +M    +  +  T   ++SG+ + G  E AMR    M+     PN
Sbjct: 184 YARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPN 243

Query: 240 LVVFNSLIKG-------------FLDIKDS------------------DGVDKALT---- 264
           +  FN+LIK              F +IK+S                  +G+D  ++    
Sbjct: 244 ICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFK 303

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M+  G  P+  T++T++ A+S  G   +  +I+  M++AGI PD+  ++ +     R G
Sbjct: 304 EMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGG 363

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
             +++E I   M+     PN + + +++  + N  ++ R +++ E++C   I P+    +
Sbjct: 364 LWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLK 423

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           TL+    +      AE     ++ KG  P  ST+ 
Sbjct: 424 TLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLN 458



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 104/438 (23%), Positives = 206/438 (47%), Gaps = 2/438 (0%)

Query: 7   KGKPHE-AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
           +G  HE A  +F  +   G  P  +TY  L+    + +R K  + ++ ++E +G  P  +
Sbjct: 116 RGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIV 175

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            +N++I+A +  G + EAM++  +M + G      TY TL+ G+   GK E ++++   M
Sbjct: 176 TYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEM 235

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
            +    KPN  T+N L++   ++    E   V  ++  S   PD VT+NTL   + Q G 
Sbjct: 236 -RAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGM 294

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
                 +  EM+     P   T   ++S Y + G+ + AM    RM E  + P+L  +N+
Sbjct: 295 DSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNA 354

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           ++         +  +K    M++   KP+ +T+ +++ A+++   +G+   + +++    
Sbjct: 355 VLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGV 414

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           IEP   +   L     +     +AE     +++ G  P++     ++S +       +  
Sbjct: 415 IEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTN 474

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            I   M E G  P+L TY +L++ +  ++   R+EE+L+ +  KG++P   +   V  ++
Sbjct: 475 EILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAY 534

Query: 426 RAIGLAREAKRVLKSAEE 443
              G  +EA R+     E
Sbjct: 535 CRNGRMKEASRIFSEMRE 552



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 167/350 (47%), Gaps = 1/350 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  E   +F  +      P ++T+ TL+A   +      +  +  ++++ G  P+   
Sbjct: 257 RGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDT 316

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I+A S  G+ D+AM I+++M ++G  P  STYN ++      G  E+S K+   M 
Sbjct: 317 YNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEM- 375

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +D   KPN+ TY  L+ A+ +   I     +  ++ +  I+P AV   TL    ++    
Sbjct: 376 KDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLL 435

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             AE    E++     P+  T   ++S Y +          L  M E    P+L  +NSL
Sbjct: 436 VEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSL 495

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +      ++ +  ++ L  +   G+KPD ++++T++ A+   G M +   IF +M ++G+
Sbjct: 496 MYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGL 555

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
            PD+  ++     Y      + A  ++  M K+G  PN   + +V+ G+C
Sbjct: 556 VPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYC 605



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 100/187 (53%), Gaps = 7/187 (3%)

Query: 54  KVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG--- 110
           ++++ G  PD    NAM++         +  +I   M +SG  P+ +TYN+L+  +    
Sbjct: 444 ELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSE 503

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
           N  + EE LK  ++++  K +KP+  +YN ++ A+C    ++EA  +  +M  SG+ PD 
Sbjct: 504 NFERSEEVLK--EILA--KGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDV 559

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           +TYNT   +YA       A  ++  M  +  +PN+ T   +V GYCK  + +DA+ F+  
Sbjct: 560 ITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNHRDDAIMFISS 619

Query: 231 MKELEVH 237
           + EL+ H
Sbjct: 620 LHELDPH 626


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 246/520 (47%), Gaps = 27/520 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ILV  G   +AH ++  + + G  P + ++T  + +  R  R  + L L++ +   G 
Sbjct: 118 MSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGC 177

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + + + +  ++    E    DE  ++F KM  SG     ST+N L+      G  +E  K
Sbjct: 178 EMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEK 237

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  + + + V PN  TYN  ++  C K  ++ A  +V +++  G +PD VTYN L    
Sbjct: 238 LLDKVIK-RGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGL 296

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +   AE  L ++ N  + P+  T   +++GYCK G ++ A R L         P+ 
Sbjct: 297 CKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDE 356

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             + SLI G     ++   ++AL L  E    G+KP+V+ ++T++   S+ GL+ +  ++
Sbjct: 357 FTYRSLIDGLCHEGET---NRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQL 413

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
             +M + G+ P++  F+IL  G  + G    A+ ++  M   G  P++  F  +I G+  
Sbjct: 414 ASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 473

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            +KM+ A+ I + M + G++P++ TY +LL G  +  +     E  + M EKG  P   T
Sbjct: 474 QLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFT 533

Query: 418 IQLVADSW-------RAIGLAREAKRVLKSAEEDRQSMPNKKDEI-------AVESIHRK 463
             ++ +S        +A+GL  E K   KS   D  +     D            ++ RK
Sbjct: 534 FNILLESLCRYHKLDKALGLLEEMKN--KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591

Query: 464 QN----LSASNSTFLQIPGVVSSEHNGSSAAKIRSQIVLR 499
                 +S S  T+  I    + + N + A K+  ++V R
Sbjct: 592 MEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 207/430 (48%), Gaps = 2/430 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L  KG   E   + + +I+ G  P L TY   +  L ++    + + ++ ++   G 
Sbjct: 223 LHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGP 282

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD + +N +I    ++    EA     K+ + G +P + TYNTLI GY   G  + + +
Sbjct: 283 KPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAER 342

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L + +      P++ TY  L+   C +     A  +  + +  GI+P+ + YNTL +  
Sbjct: 343 IL-VNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           +  G    A Q+  EM    + P  +T  I+V+G CK G + DA   +  M      P++
Sbjct: 402 SNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FN LI G+      +   + L +M + GV PDV T++++++            E +  
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKT 521

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ G  P++  F+IL +   R  +  KA  +L  M+   V+P+ V F T+I G+C    
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581

Query: 361 MQRAMSIYEKMCEI-GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           +  A +++ KM E+  ++ +  TY  ++  + E      AE+L Q M ++ + P   T +
Sbjct: 582 LDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641

Query: 420 LVADSWRAIG 429
           L+ D +   G
Sbjct: 642 LMVDGFCKTG 651



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 175/414 (42%), Gaps = 43/414 (10%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L    K  EA      L+ EG  P   TY TL+A   +    +    ++     +G  PD
Sbjct: 296 LCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPD 355

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              + ++I+     G  + A+ +F +    G KP    YNTLIKG  N G   E+ +L  
Sbjct: 356 EFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLAS 415

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            MS+ K + P  +T+NILV   C    + +A  +V  M++ G  PD  T+N L   Y+  
Sbjct: 416 EMSE-KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQ 474

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +   A ++L  M +N V P+  T   +++G CK    ED M     M E    PNL  F
Sbjct: 475 LKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTF 534

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAG-------LMGK 293
           N L++          +DKAL L+EE     V PD VTF T++D +   G       L  K
Sbjct: 535 NILLESLCRYHK---LDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591

Query: 294 CQEI-----------------------------FDDMVKAGIEPDIHVFSILAKGYVRAG 324
            +E+                             F +MV   + PD + + ++  G+ + G
Sbjct: 592 MEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTG 651

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
                   L  M + G  P++     VI+  C   ++  A  I  +M + G+ P
Sbjct: 652 NVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 93/385 (24%), Positives = 186/385 (48%), Gaps = 1/385 (0%)

Query: 41  RQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS 100
           R+ + +  +++  +++    +P    +NA+++   +SG  D+A K++ +M+D G  P   
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVY 147

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
           ++   +K +    +P  +L+LL  MS  +  + N   Y  +V  +  +N  +E + +  K
Sbjct: 148 SFTIRMKSFCRTSRPHAALRLLNNMSS-QGCEMNVVAYCTVVGGFYEENFKDEGYELFGK 206

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           M+ASG+     T+N L     + G+    E++L ++    V PN  T    + G C++G 
Sbjct: 207 MLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGE 266

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           ++ A+R + R+ +    P++V +N LI G          +  L  +   G++PD  T++T
Sbjct: 267 LDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNT 326

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++  +   G++   + I  + V  G  PD   +  L  G    GE  +A ++       G
Sbjct: 327 LIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKG 386

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
           + PNV+++ T+I G  N   +  A  +  +M E G+ P ++T+  L+ G  +      A+
Sbjct: 387 IKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSW 425
            L++VM  KG  P   T  ++   +
Sbjct: 447 GLVKVMISKGYFPDIFTFNILIHGY 471



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 213/435 (48%), Gaps = 9/435 (2%)

Query: 10  PHEAHYIFNCL-IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD--GMKPDSIL 66
           P +A  +FN +  E+G + TL TY +++  L    +F+++  ++  + ++      + + 
Sbjct: 20  PMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVY 79

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
             AM N     G V EA+ +F++M    C+PT  +YN ++    + G  +++ K+   M 
Sbjct: 80  VGAMKNY-GRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRM- 137

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +D+ + P+  ++ I ++++C  +    A  ++  M + G + + V Y T+   +  Y E 
Sbjct: 138 RDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGF--YEEN 195

Query: 187 YRAE--QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           ++ E  ++  +M  + V     T   ++   CK+G++++  + L ++ +  V PNL  +N
Sbjct: 196 FKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYN 255

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
             I+G     + D   + +  + + G KPDVVT++ ++          + +     +V  
Sbjct: 256 FFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNE 315

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+EPD   ++ L  GY + G  Q AE IL +    G  P+   + ++I G C+  +  RA
Sbjct: 316 GLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRA 375

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           ++++ +    GI PN+  Y TL+ G         A +L   M EKG+ P+  T  ++ + 
Sbjct: 376 LALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNG 435

Query: 425 WRAIGLAREAKRVLK 439
              +G   +A  ++K
Sbjct: 436 LCKMGCVSDADGLVK 450



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 150/342 (43%), Gaps = 37/342 (10%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+ + A  +FN  + +G +P +I Y TL+  L+ Q        L S++ + G+ P+
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPE 425

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              FN ++N   + G V +A  + + M   G  P   T+N LI GY    K E +L++L 
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           +M  D  V P+  TYN L+   C  +  E+       MV  G  P+  T+N L  +  +Y
Sbjct: 486 VM-MDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRY 544

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-------- 235
            +  +A  +L EM+N  V P+  T G ++ G+CK G+++ A     +M+E+         
Sbjct: 545 HKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPT 604

Query: 236 ----VH------------------------PNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
               +H                        P+   +  ++ GF    + D   K L  M 
Sbjct: 605 YNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMM 664

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
           E G  P + T   +++       + +   I   MV+ G+ P+
Sbjct: 665 ENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 128/251 (50%), Gaps = 8/251 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G   +A  +   +I +G+ P + T+  L+   + Q + ++ L ++  +  +G+
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGV 492

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +N+++N   ++   ++ M+ ++ M + GC P   T+N L++      K +++L 
Sbjct: 493 DPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALG 552

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM----VASGIQPDAVTYNTL 176
           LL+ M ++K+V P+  T+  L+  +C    ++ A+ +  KM    + S   P   TYN +
Sbjct: 553 LLEEM-KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTP---TYNII 608

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
             A+ +      AE++  EM +  + P+  T  ++V G+CK GN++   +FL  M E   
Sbjct: 609 IHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGF 668

Query: 237 HPNLVVFNSLI 247
            P+L     +I
Sbjct: 669 IPSLTTLGRVI 679



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 110/233 (47%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K   A  I + +++ G  P + TY +L+  L +  +++ ++     + + G  P+   FN
Sbjct: 476 KMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFN 535

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            ++ +      +D+A+ + ++MK+    P   T+ TLI G+   G  + +  L + M + 
Sbjct: 536 ILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEV 595

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
             V  +  TYNI++ A+  K ++  A  +  +MV   + PD  TY  +   + + G    
Sbjct: 596 YMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDL 655

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
             + L EM  N   P+  T G +++  C E  + +A   ++RM +  + P  V
Sbjct: 656 GYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/361 (21%), Positives = 155/361 (42%), Gaps = 36/361 (9%)

Query: 82  EAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           +A+++F  M K+ G K T STY ++I+  G  GK E   ++L  M Q+      +  Y  
Sbjct: 22  KALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVG 81

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
            ++ +  K  ++EA NV  +M     +P   +YN +                        
Sbjct: 82  AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSI--------------------- 120

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
                    ++ SGY      + A +   RM++  + P++  F   +K F          
Sbjct: 121 ---------LVDSGY-----FDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAAL 166

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           + L  M   G + +VV + T++  +       +  E+F  M+ +G+   +  F+ L    
Sbjct: 167 RLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVL 226

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            + G+ ++ E +L  + K GV PN+  +   I G C   ++  A+ +  ++ + G  P++
Sbjct: 227 CKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDV 286

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            TY  L++G  +  +   AE  L  +  +G+ P   T   +   +   G+ + A+R+L +
Sbjct: 287 VTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVN 346

Query: 441 A 441
           A
Sbjct: 347 A 347


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 212/419 (50%), Gaps = 10/419 (2%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           RP  I+YTTL+ AL   +R    + L+  ++  G++PD + +  +I    ++ +VD A++
Sbjct: 91  RPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVE 150

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +  +M +SG +P    Y+ L+ GY   G+ E   K+ + MS  + ++P+   Y  L+ + 
Sbjct: 151 LLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMS-GRGIEPDVVMYTALIDSL 209

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C    +++A  V+  M   G++P+ VTYN L  +  + G    A  +   M    V+P+ 
Sbjct: 210 CRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDV 269

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRM--KELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
            T   +++G      M++AM  L  M   E  V P+L+ FNS+I G   I       +  
Sbjct: 270 VTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVR 329

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            +M E G + ++V F+ ++        + K  E+ D+M  +G++PD   +SIL  G+ + 
Sbjct: 330 AMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKM 389

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM---CEIGINPNL 380
            + ++AES L+ MR  G+ P  V +  ++   C+   M +A  ++ +M   C++    + 
Sbjct: 390 RQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKL----DA 445

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             Y T++ G  ++ +   AEE L+ M ++G+ P   T  +  + +   G    A+RVLK
Sbjct: 446 AAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLK 504



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/515 (25%), Positives = 243/515 (47%), Gaps = 58/515 (11%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L    +  +A  +   + + G RP ++TY TL+  L       + + L++++ + G+
Sbjct: 101 MRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGI 160

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ ++++ +++   ++G  +   K+F++M   G +P    Y  LI      GK +++ +
Sbjct: 161 EPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAAR 220

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           ++ +M++ + ++PN  TYN+L+ + C + S+ EA ++   M   G+QPD VTYNTL    
Sbjct: 221 VMDMMTE-RGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGL 279

Query: 181 AQYGETYRAEQMLFEMQNNQ--VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           +   E   A  +L EM   +  VRP+  T   ++ G CK G M  A++    M E     
Sbjct: 280 SSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRC 339

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMD------------ 283
           NLV FN LI G L +     V KA+ LM+E    G++PD  T+S +++            
Sbjct: 340 NLVAFNLLIGGLLRVHK---VKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAE 396

Query: 284 -----------------------AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
                                  A    G+MG+ +++F++M +   + D   +S +  G 
Sbjct: 397 SYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDR-NCKLDAAAYSTMIHGA 455

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            ++GE + AE  L  M   G+ P+ V ++  I+ +  +  +  A  + ++M   G  P++
Sbjct: 456 FKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDV 515

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
             +++L+ GYG      +  EL + M  K V      I  +  S   +G + E +++L  
Sbjct: 516 AVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTS---LGASIEGQKLL-- 570

Query: 441 AEEDRQSMPNKKDEIA---VESIHRKQNLSASNST 472
                QS+P    EI+   V S H   N+   + T
Sbjct: 571 -----QSLPGFDTEISKGDVISPHDVMNMLQKHCT 600



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 152/283 (53%), Gaps = 9/283 (3%)

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKM-----VASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +YN ++ A C +  ++ A  ++  M     +AS  +P+A++Y TL RA        +A  
Sbjct: 58  SYNTVLAALCRQGCLDAALFLLRVMSHEPRLAS--RPNAISYTTLMRALCADRRAAQAVG 115

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L  MQ+  VRP+  T G ++ G C   +++ A+  L  M E  + PN+VV++ L+ G+ 
Sbjct: 116 LLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYC 175

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                + V K    M   G++PDVV ++ ++D+    G + K   + D M + G+EP++ 
Sbjct: 176 KTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVV 235

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            +++L     + G  ++A  +  +M + GV P+VV + T+I+G  + ++M  AM++ E+M
Sbjct: 236 TYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEM 295

Query: 372 C--EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
              E  + P+L T+ +++ G  +     +A ++  +M E G R
Sbjct: 296 MQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCR 338



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 136/274 (49%), Gaps = 5/274 (1%)

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQNN---QVRPNERTCGIIVSGYCKEGNMEDAM 225
           DAV+YNT+  A  + G    A  +L  M +      RPN  +   ++   C +     A+
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
             L  M++  V P++V + +LI+G  D  D D   + L  M E G++P+VV +S ++  +
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
              G      ++F++M   GIEPD+ +++ L     R G+ +KA  ++  M + G+ PNV
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
           V +  +I+  C    ++ A+ + + M E G+ P++ TY TL+ G     +   A  LL+ 
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEE 294

Query: 406 M--EEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           M   E  VRP   T   V      IG  R+A +V
Sbjct: 295 MMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQV 328



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 4/180 (2%)

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMV---KAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           D V+++T++ A    G +     +   M    +    P+   ++ L +         +A 
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +L SM+  GV P+VV + T+I G C+A  +  A+ +  +MCE GI PN+  Y  LL GY
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            +  +     ++ + M  +G+ P       + DS    G  ++A RV+    E R   PN
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTE-RGLEPN 233


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 193/368 (52%), Gaps = 1/368 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  IF  ++ +G  P L+++++L+A  +R +     L     ++K G+ PD++++  ++
Sbjct: 241 EAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLM 300

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +    +GN+ EA+KI  +M + GC      YNT++ G        ++ KL   M + +  
Sbjct: 301 HGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVE-RGA 359

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  T+  L+   C   ++ +A ++   M    I+PD V YNTL   + + GE  +A +
Sbjct: 360 LPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASE 419

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +   M + ++ PN  T GI+++ YC  G++ +A R    M E  + P LV  N++IKG+ 
Sbjct: 420 LWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYC 479

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
              DS   D+ L  M   GV PD ++++T+++ +     M K     + M K G+ PDI 
Sbjct: 480 RSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDII 539

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++++  G+ R G  Q+AE +L  M + G++P+   +T +I+G      +  A   +++M
Sbjct: 540 TYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEM 599

Query: 372 CEIGINPN 379
            + G  P+
Sbjct: 600 LQRGFAPD 607



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 214/420 (50%), Gaps = 5/420 (1%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N L+G    +G   EA  I N + ++G +P+L TY  ++  L ++ R+     ++ ++  
Sbjct: 157 NTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLN 216

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+ PD+  +N ++       N  EA +IF +M   G  P   ++++LI  +      ++
Sbjct: 217 IGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQ 276

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +L   + M +   V P++  Y +L+  +C   ++ EA  +  +M+  G   D + YNT+ 
Sbjct: 277 ALVYFRDMKKFGLV-PDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTIL 335

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               +      A+++  EM      P+  T   ++ G+C++GNM  A+     M +  + 
Sbjct: 336 NGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIK 395

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P++V +N+LI GF  + + +   +    M    + P+ +T+  +++A+ S G + +   +
Sbjct: 396 PDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRL 455

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           +D M++ GI+P +   + + KGY R+G+  KA+  L  M   GV P+ + + T+I+G+  
Sbjct: 456 WDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVR 515

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              M +A     KM + G+ P++ TY  ++ G+    +   AE +L+ M EKG+ P +ST
Sbjct: 516 EDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRST 575



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 191/413 (46%), Gaps = 1/413 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  KG+   A  I   ++  G  P   TY TL+    R+  F     +  ++ + G+
Sbjct: 195 INGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGV 254

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + F+++I   S + ++D+A+  F+ MK  G  P    Y  L+ GY   G   E+LK
Sbjct: 255 VPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALK 314

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M +   V  +   YN ++   C +  + +A  +  +MV  G  PD  T+ TL   +
Sbjct: 315 IRDEMLEQGCV-LDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGH 373

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G   +A  +   M    ++P+      ++ G+CK G ME A      M   ++ PN 
Sbjct: 374 CQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNH 433

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +  LI  +  +       +   +M E G+KP +VT +T++  +  +G   K  E    
Sbjct: 434 ITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGR 493

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  G+ PD   ++ L  G+VR     KA   +  M K G+ P+++ +  V++G+C   +
Sbjct: 494 MIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGR 553

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           MQ A  +  KM E GINP+  TY  L+ G+        A      M ++G  P
Sbjct: 554 MQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAP 606



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 205/430 (47%), Gaps = 1/430 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  E    F  L  +G+  ++    +L+  L +    +    +  +V + G++ +    N
Sbjct: 63  KLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLN 122

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            M+NA  + G  D+      +M+ +G      TYNTLI  Y   G  EE+ +++  M+ D
Sbjct: 123 IMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMA-D 181

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K +KP+  TYN ++   C K     A  ++ +M+  G+ PD  TYNTL     +      
Sbjct: 182 KGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSE 241

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A+++  EM    V P+  +   +++ + +  +++ A+ +   MK+  + P+ V++  L+ 
Sbjct: 242 AKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMH 301

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G+    +     K    M E G   DV+ ++TI++      ++    ++FD+MV+ G  P
Sbjct: 302 GYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALP 361

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D + F+ L  G+ + G   KA S+  +M +  + P++V + T+I G+C   +M++A  ++
Sbjct: 362 DFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELW 421

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           + M    I PN  TY  L+  Y        A  L  VM EKG++P   T   V   +   
Sbjct: 422 DGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRS 481

Query: 429 GLAREAKRVL 438
           G + +A   L
Sbjct: 482 GDSSKADEFL 491



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/481 (24%), Positives = 227/481 (47%), Gaps = 37/481 (7%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G    + T   +V AL +  +F  + S +S++E +G+  D + +N +I A    G 
Sbjct: 109 VVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGL 168

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           ++EA +I   M D G KP+  TYN +I G    G+   +  +L  M  +  + P+  TYN
Sbjct: 169 LEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM-LNIGLSPDTTTYN 227

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+   C +++  EA  +  +M+  G+ PD V++++L   +++     +A     +M+  
Sbjct: 228 TLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKF 287

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD---IKDS 256
            + P+     +++ GYC+ GNM +A++    M E     +++ +N+++ G      + D+
Sbjct: 288 GLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDA 347

Query: 257 D-----------------------------GVDKALTL---MEEFGVKPDVVTFSTIMDA 284
           D                              + KAL+L   M +  +KPD+V ++T++D 
Sbjct: 348 DKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDG 407

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           +   G M K  E++D M+   I P+   + IL   Y   G   +A  +   M + G+ P 
Sbjct: 408 FCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPT 467

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
           +V   TVI G+C +    +A     +M   G+ P+  +Y TL+ G+       +A   + 
Sbjct: 468 LVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWIN 527

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQ 464
            ME++G+ P   T  +V + +   G  +EA+ VL+   E +   P++    A+ + H  Q
Sbjct: 528 KMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIE-KGINPDRSTYTALINGHVTQ 586

Query: 465 N 465
           +
Sbjct: 587 D 587



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/324 (22%), Positives = 139/324 (42%), Gaps = 35/324 (10%)

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
           N   N+  +++L+R +     + E       + + G        N+L     +      A
Sbjct: 43  NCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELA 102

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
            ++  E+  + +  N  T  I+V+  CK+G  +D   FL  M+   ++ ++V +N+LI  
Sbjct: 103 WEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGA 162

Query: 250 F---------LDIKDS-----------------DGVDKA---------LTLMEEFGVKPD 274
           +          +I +S                 +G+ K          L  M   G+ PD
Sbjct: 163 YCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPD 222

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
             T++T++          + +EIF +M++ G+ PD+  FS L   + R     +A     
Sbjct: 223 TTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFR 282

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            M+K+G+ P+ V++T ++ G+C    M  A+ I ++M E G   ++  Y T+L G  + K
Sbjct: 283 DMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEK 342

Query: 395 QPWRAEELLQVMEEKGVRPKKSTI 418
               A++L   M E+G  P   T 
Sbjct: 343 MLTDADKLFDEMVERGALPDFYTF 366



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 1/128 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A      +I +G  P  I+Y TL+    R+         I+K+EK+G+ PD I +
Sbjct: 482 GDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITY 541

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++N     G + EA  + +KM + G  P  STY  LI G+       E+ +    M Q
Sbjct: 542 NVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQ 601

Query: 128 DKNVKPND 135
            +   P+D
Sbjct: 602 -RGFAPDD 608



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 97/201 (48%), Gaps = 2/201 (0%)

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           N +VF+ LI+ ++  +      +A  ++   G    +   ++++        +    E+ 
Sbjct: 47  NNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVH 106

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
            ++V++GIE +++  +I+     + G+    +S L+ M   G++ ++V + T+I  +C  
Sbjct: 107 REVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCRE 166

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
             ++ A  I   M + G+ P+L TY  ++ G  +  +  RA+ +L  M   G+ P  +T 
Sbjct: 167 GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 226

Query: 419 Q-LVADSWRAIGLAREAKRVL 438
             L+ +S R    + EAK + 
Sbjct: 227 NTLLVESCRRDNFS-EAKEIF 246


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 120/500 (24%), Positives = 228/500 (45%), Gaps = 7/500 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+LV   K      ++N +   G +P ++T  TL+ AL R  + ++ + ++ ++   G+
Sbjct: 169 LNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGV 228

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   F  ++    E G+++ A+++  KM ++GC PT  T N LI GY  +G+ E++L 
Sbjct: 229 APDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALG 288

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            +Q    D   +P+  TYN  V   C    +  A  V+  M+  G  PD  TYNT+    
Sbjct: 289 YIQQEIAD-GFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCL 347

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++ GE   A+ ++ +M +    P+  T   ++     +  +E+A+     +    + P++
Sbjct: 348 SKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDV 407

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FN LI     + D     +    M+  G  PD VT++ ++D   S G +G   ++ ++
Sbjct: 408 YTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNE 467

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G       ++ +     +    ++AE +   M   G+  + V F T+I G C A +
Sbjct: 468 MESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKR 527

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  + E+M + G+ PN  TY ++L  Y +     +A ++L+ M   G      T   
Sbjct: 528 IDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGT 587

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVV 480
           + +     G  + A ++L+           K     ++S+ R+ NL  + + F ++  V 
Sbjct: 588 LINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEV- 646

Query: 481 SSEHNGSSAAKIRSQIVLRS 500
                G     +  +IV RS
Sbjct: 647 -----GEPPDALTYKIVFRS 661



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 170/359 (47%), Gaps = 4/359 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EA  I N +++ G  P   T+ TL+ AL+ Q R +  L L  ++   G+
Sbjct: 344 INCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGL 403

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   FN +INA  + G+    +++F++MK SGC P   TYN LI    ++GK   +L 
Sbjct: 404 SPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALD 463

Query: 121 LLQLMSQDKNVKPNDR-TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           LL  M  + N  P    TYN ++ A C K  IEEA  V  +M A GI   AVT+NTL   
Sbjct: 464 LLNEM--ESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDG 521

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             +      A +++ +M    ++PN  T   I++ YCK+GN++ A   L  M       +
Sbjct: 522 LCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEID 581

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +V + +LI G      +    K L  M   G++P    ++ ++ +      +     +F 
Sbjct: 582 VVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFR 641

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEP-QKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           +M + G  PD   + I+ +   R G P ++A   L  M   G  P    F  +  G  N
Sbjct: 642 EMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLN 700



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/426 (22%), Positives = 188/426 (44%), Gaps = 11/426 (2%)

Query: 7   KGKPHEAHYIFN-CLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
           +  P  A  + N  L  E   P+   Y  +V  L     F  +  L+ ++ ++G +  ++
Sbjct: 66  QSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAV 125

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDS---GCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           +  + + + +     D+A+ +     D+   G +  T  +N L+    NV      LKLL
Sbjct: 126 VVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLL----NVLVEGSKLKLL 181

Query: 123 QLMSQD---KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           + +  +   + ++P+  T N L++A C  + +  A  ++ +M + G+ PD  T+ TL + 
Sbjct: 182 ESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQG 241

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + + G    A ++  +M      P   T  ++++GYCK G +EDA+ ++ +       P+
Sbjct: 242 FIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPD 301

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            V +N+ + G           K + LM + G  PDV T++T+++  S  G + + + I +
Sbjct: 302 QVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVN 361

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            MV  G  PD   F+ L          ++A  +   +   G+ P+V  F  +I+  C   
Sbjct: 362 QMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVG 421

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
                + ++E+M   G  P+  TY  L+       +   A +LL  ME  G      T  
Sbjct: 422 DPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYN 481

Query: 420 LVADSW 425
            + D+ 
Sbjct: 482 TIIDAL 487


>gi|115482710|ref|NP_001064948.1| Os10g0495100 [Oryza sativa Japonica Group]
 gi|22128714|gb|AAM92826.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
 gi|31432837|gb|AAP54424.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639557|dbj|BAF26862.1| Os10g0495100 [Oryza sativa Japonica Group]
 gi|125575261|gb|EAZ16545.1| hypothetical protein OsJ_32018 [Oryza sativa Japonica Group]
          Length = 461

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 189/379 (49%), Gaps = 2/379 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P L TY+ L+    R  R     + +  V K G + ++I F  ++          +AM I
Sbjct: 82  PNLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDI 141

Query: 87  -FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT-YNILVRA 144
              +M   GC P   +   L+KG  +  + +E+L+LLQ+M  D    P D   YN ++  
Sbjct: 142 VLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNTVING 201

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +  +   ++A+   ++M   GI PD VTY+++  A  +     +A ++L  M  N V PN
Sbjct: 202 FFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPN 261

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
            RT   IV GYC  G + +A+ FL  M    V P++V  N L+      +      K   
Sbjct: 262 CRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEARKIFN 321

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M + G+KPD+ T+ T++  +++ G + +  ++ D MV  GI+P+ HVF+IL   Y +  
Sbjct: 322 SMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVFNILICAYAKQE 381

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           +  +A  + + MR+ G+ PN V + TVI   C   ++  A+   ++M   G+ P++  Y 
Sbjct: 382 KVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVYDAVLTLKQMINEGLTPDIIVYT 441

Query: 385 TLLWGYGEAKQPWRAEELL 403
            L+ G+    +  +AEEL+
Sbjct: 442 PLIHGFCTCDKWEKAEELI 460



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 143/298 (47%), Gaps = 3/298 (1%)

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA- 189
           V PN  TY++L+   C    ++  +  +  ++  G + +A+T+  L +       T  A 
Sbjct: 80  VTPNLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAM 139

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL--EVHPNLVVFNSLI 247
           + +L  M      PN  +C I++ G C E   ++A+  L  M +   +  P++V++N++I
Sbjct: 140 DIVLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNTVI 199

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            GF    D D        M + G+ PDVVT+S+I+ A   A  M K  E+ + MVK G+ 
Sbjct: 200 NGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVM 259

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P+   ++ +  GY  +G+  +A   L  M   GV P+VV    ++   C   +   A  I
Sbjct: 260 PNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEARKI 319

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           +  M + G+ P++ TY TLL GY          +LL +M   G++P      ++  ++
Sbjct: 320 FNSMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVFNILICAY 377



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 133/250 (53%), Gaps = 1/250 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G P +A+  ++ + ++G  P ++TY++++AAL + +     + +++ + K+G+
Sbjct: 199 INGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 258

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   +N++++    SG + EA+   + M   G +P   T N L+       +  E+ K
Sbjct: 259 MPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEARK 318

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M++   +KP+  TY  L++ + +K ++ E  +++  MV +GIQP+   +N L  AY
Sbjct: 319 IFNSMTK-CGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVFNILICAY 377

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+  +   A  +  +M+   + PN      ++   CK G + DA+  L +M    + P++
Sbjct: 378 AKQEKVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVYDAVLTLKQMINEGLTPDI 437

Query: 241 VVFNSLIKGF 250
           +V+  LI GF
Sbjct: 438 IVYTPLIHGF 447



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 82/159 (51%), Gaps = 1/159 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L    +  EA  IFN + + G +P + TY TL+     +     +  L+  +  +G+
Sbjct: 304 MDYLCKNRRCTEARKIFNSMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGI 363

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+  +FN +I A ++   VDEAM +F KM+  G  P    Y T+I     +G+  +++ 
Sbjct: 364 QPNHHVFNILICAYAKQEKVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVYDAVL 423

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVY 159
            L+ M  ++ + P+   Y  L+  +C+ +  E+A  +++
Sbjct: 424 TLKQMI-NEGLTPDIIVYTPLIHGFCTCDKWEKAEELIF 461


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 217/414 (52%), Gaps = 4/414 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN      +P+ A      +++ G  P ++T+T+L+       R +  +S+++++ + G+
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD +++  +I++  ++G+V+ A+ +F +M++ G +P    Y +L+ G  N G+  ++  
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M++ K +KP+  T+N L+ A+  +    +A  +  +M+   I P+  TY +L   +
Sbjct: 234 LLRGMTKRK-IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A QM + M+     P+      +++G+CK   ++DAM+  Y M +  +  N 
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + + +LI+GF  +   +   +  + M   GV P++ T++ ++      G + K   IF+D
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412

Query: 301 MVKA---GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           M K    G+ P+I  +++L  G    G+ +KA  +   MRK  +   ++ +T +I G C 
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK 472

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           A K++ A++++  +   G+ PN+ TY T++ G         A  L + M+E GV
Sbjct: 473 AGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 119/472 (25%), Positives = 218/472 (46%), Gaps = 39/472 (8%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSIL--------------------- 49
           +EA  +F  ++E    P++I +T L+  + + K+F  ++                     
Sbjct: 54  NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113

Query: 50  --------------SLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGC 95
                         S + K+ K G +PD + F ++IN       ++EAM +  +M + G 
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173

Query: 96  KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
           KP    Y T+I      G    +L L   M ++  ++P+   Y  LV   C+     +A 
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQM-ENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
           +++  M    I+PD +T+N L  A+ + G+   AE++  EM    + PN  T   +++G+
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C EG +++A +  Y M+     P++V + SLI GF   K  D   K    M + G+  + 
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           +T++T++  +   G     QE+F  MV  G+ P+I  +++L       G+ +KA  I   
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412

Query: 336 MRKY---GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           M+K    GV PN+  +  ++ G C   K+++A+ ++E M +  ++  + TY  ++ G  +
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK 472

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           A +   A  L   +  KGV+P   T   +       GL  EA  + +  +ED
Sbjct: 473 AGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKED 524


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 215/417 (51%), Gaps = 15/417 (3%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G   +A  +F+ +I  G +P + TYT L+  L R  + +    +  K+ KDG+ P 
Sbjct: 311 LCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPS 370

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I +NA+IN   + G V  A ++   M+   CKP   T+N L++G   VGKP +++ LL+
Sbjct: 371 VITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK 430

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D  + P+  +YN+L+   C +  +  A+ ++  M +  ++PD +T+  +  A+ + 
Sbjct: 431 RM-LDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQ 489

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV----HPN 239
           G+   A   L  M    +  +E T   ++ G C  G   DA+  L  + ++ +    H  
Sbjct: 490 GKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSL 549

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            V+ + L KG   +K+   +   L  + + G+ P VVT++T++D    +G +     + +
Sbjct: 550 NVILDMLSKG-CKLKEELAM---LGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLE 605

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            M  +G  P+++ ++I+  G  + G  ++AE +L++M+  GV PN V +T ++ G+ N  
Sbjct: 606 LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ------PWRAEELLQVMEEKG 410
           K+ RA+     M E G   N + Y +LL G+  +++      P   +EL+ V+E+ G
Sbjct: 666 KLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLG 722



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 208/441 (47%), Gaps = 4/441 (0%)

Query: 12  EAHYIFNC-LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM-KPDSILFNA 69
           EA  +F C +++ G        T+L+    R    +  L +   + ++G   P+S+ ++ 
Sbjct: 212 EAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSI 271

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK 129
           +I+   E G ++EA  +  +M + GC+P+T TY  LIK   + G  +++  L   M   +
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIA-R 330

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
             KPN  TY +L+   C    IEEA  V  KMV  GI P  +TYN L   Y + G    A
Sbjct: 331 GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPA 390

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
            ++L  M+    +PN RT   ++ G C+ G    A+  L RM +  + P++V +N LI G
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450

Query: 250 FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
                  +   K LT M  F ++PD +TF+ I++A+   G           M++ GI  D
Sbjct: 451 LCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
               + L  G    G+ + A  IL ++ K  +         ++       K++  +++  
Sbjct: 511 EVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLG 570

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           K+ ++G+ P++ TY TL+ G   +     +  +L++M+  G  P      ++ +     G
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFG 630

Query: 430 LAREAKRVLKSAEEDRQSMPN 450
              EA+++L SA +D    PN
Sbjct: 631 RVEEAEKLL-SAMQDSGVSPN 650



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 200/435 (45%), Gaps = 37/435 (8%)

Query: 12  EAHYIFNCLIEEGH-RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           +A  +F+ +  EG   P  ++Y+ L+  L    R +    L  ++ + G +P +  +  +
Sbjct: 248 DALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           I A  + G +D+A  +F +M   GCKP   TY  LI G    GK EE+  + + M +D  
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD-G 366

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           + P+  TYN L+  +C    +  A+ ++  M     +P+  T+N L     + G+ Y+A 
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAV 426

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            +L  M +N + P+  +  +++ G C+EG+M  A + L  M   ++ P+ + F ++I  F
Sbjct: 427 HLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAF 486

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA------ 304
                +D     L LM   G+  D VT +T++D   + G       I + +VK       
Sbjct: 487 CKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTP 546

Query: 305 -----------------------------GIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
                                        G+ P +  ++ L  G +R+G+   +  +L  
Sbjct: 547 HSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLEL 606

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M+  G  PNV  +T +I+G C   +++ A  +   M + G++PN  TY  ++ GY    +
Sbjct: 607 MKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGK 666

Query: 396 PWRAEELLQVMEEKG 410
             RA E ++ M E+G
Sbjct: 667 LDRALETVRAMVERG 681



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 137/328 (41%), Gaps = 39/328 (11%)

Query: 116 EESLKLLQLMSQDKNV---KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT 172
           +E LKL+    + + V   + N   Y+ L+ +    +    A+    +M A G     + 
Sbjct: 138 KEMLKLISCFDELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMID 197

Query: 173 YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM- 231
           Y T+  A  + G T  AE  + ++       +      ++ G+C+  N+ DA++    M 
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMS 257

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
           +E    PN V ++ LI G  ++           L E FG+K                   
Sbjct: 258 REGTCAPNSVSYSILIHGLCEVG---------RLEEAFGLK------------------- 289

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
                  D M + G +P    +++L K     G   KA ++   M   G  PNV  +T +
Sbjct: 290 -------DQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVL 342

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I G C   K++ A  +  KM + GI P++ TY  L+ GY +  +   A ELL VME++  
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC 402

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLK 439
           +P   T   + +    +G   +A  +LK
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLK 430



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/359 (22%), Positives = 155/359 (43%), Gaps = 18/359 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +GK   A      ++ +G     +T TTL+  +    + +  L ++  + K  M
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRM 542

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
                  N +++  S+   + E + +  K+   G  P+  TY TL+ G    G    S +
Sbjct: 543 LTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFR 602

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+LM     + PN   Y I++   C    +EEA  ++  M  SG+ P+ VTY  + + Y
Sbjct: 603 MLELMKLSGCL-PNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC------KEGNMEDAMRFLYRMKEL 234
              G+  RA + +  M       N+R    ++ G+       +E + E     +  +++L
Sbjct: 662 VNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQL 721

Query: 235 EVHPN-LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
               + L +F  L+        +D  +  +  + + GV  +      IM+++ S     K
Sbjct: 722 GGSTSGLCIF--LVTRLCKEGRTDESNGLVQTILKSGVFLE-KAIDIIMESYCSKKKHTK 778

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE----SILTS---MRKYGVHPNV 345
           C E+   ++K+G  P    F ++ +G  + G+ ++A      +LTS   + K GV P V
Sbjct: 779 CVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVMELLTSNGVVEKSGVLPYV 837


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/476 (23%), Positives = 221/476 (46%), Gaps = 5/476 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +P + T+  L+ AL R  + +  + ++  +   G+ PD   F  ++    E G++D A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           ++I ++M + GC  +  + N ++ G+   G+ E++L  +Q MS      P+  T+N LV 
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C    ++ A  ++  M+  G  PD  TYN++     + GE   A ++L +M      P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  T   ++S  CKE  +E+A      +    + P++  FNSLI+G    ++     +  
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M   G +PD  T++ ++D+  S G + +   +   M  +G    +  ++ L  G+ +A
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
            + ++AE I   M  +GV  N V + T+I G C + +++ A  + ++M   G  P+  TY
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            +LL  +       +A +++Q M   G  P   T   +       G    A ++L+S + 
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603

Query: 444 DRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSEHNGSSAAKIRSQIVLR 499
              ++        ++ + RK+  + + + F ++      E N +    +  +IV R
Sbjct: 604 KGINLTPHAYNPVIQGLFRKRKTTEAINLFREM-----LEQNEAPPDAVSYRIVFR 654



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 203/396 (51%), Gaps = 4/396 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE-KDGMKPDSILFNAMINACSESG 78
           ++E G   + ++   +V    ++ R +  L+ I ++  +DG  PD   FN ++N   ++G
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-QLMSQDKNVKPNDRT 137
           +V  A++I   M   G  P   TYN++I G   +G+ +E++++L Q++++D    PN  T
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD--CSPNTVT 367

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           YN L+   C +N +EEA  +   + + GI PD  T+N+L +          A ++  EM+
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
           +    P+E T  +++   C +G +++A+  L +M+      +++ +N+LI GF     + 
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
             ++    ME  GV  + VT++T++D    +  +    ++ D M+  G +PD + ++ L 
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
             + R G+ +KA  I+ +M   G  P++V + T+ISG C A +++ A  +   +   GIN
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIN 607

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
                Y  ++ G    ++   A  L + M E+   P
Sbjct: 608 LTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 196/399 (49%), Gaps = 9/399 (2%)

Query: 48  ILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIK 107
           + +L SK  K    P+  L+  ++     SG+ D+  KI + MK S C+  TST+  LI+
Sbjct: 69  LFNLASK--KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIE 126

Query: 108 GYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ 167
            Y      +E L ++  M  +  +KP+   YN ++      NS++       KM   GI+
Sbjct: 127 SYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIK 186

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
           PD  T+N L +A  +  +   A  ML +M +  + P+E+T   ++ GY +EG+++ A+R 
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF----GVKPDVVTFSTIMD 283
             +M E     + V  N ++ GF        V+ AL  ++E     G  PD  TF+T+++
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFC---KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
               AG +    EI D M++ G +PD++ ++ +  G  + GE ++A  +L  M      P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           N V + T+IS  C   +++ A  +   +   GI P++ T+ +L+ G    +    A EL 
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           + M  KG  P + T  ++ DS  + G   EA  +LK  E
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 194/394 (49%), Gaps = 9/394 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G    A  I + +++EG+ P + TY ++++ L +    K  + ++ ++     
Sbjct: 302 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC 361

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+++ +N +I+   +   V+EA ++ + +   G  P   T+N+LI+G         +++
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 421

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M + K  +P++ TYN+L+ + CSK  ++EA N++ +M  SG     +TYNTL   +
Sbjct: 422 LFEEM-RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +T  AE++  EM+ + V  N  T   ++ G CK   +EDA + + +M      P+ 
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540

Query: 241 VVFNSLIKGFL---DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             +NSL+  F    DIK +  + +A+T     G +PD+VT+ T++     AG +    ++
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMT---SNGCEPDIVTYGTLISGLCKAGRVEVASKL 597

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG-VHPNVVMFTTVISGWC 356
              +   GI    H ++ + +G  R  +  +A ++   M +     P+ V +  V  G C
Sbjct: 598 LRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLC 657

Query: 357 N-AVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           N    ++ A+    ++ E G  P   +   L  G
Sbjct: 658 NGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEG 691



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 112/254 (44%), Gaps = 17/254 (6%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  IF+ +   G     +TY TL+  L + +R +    L+ ++  +G KPD   +N
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYN 544

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           +++      G++ +A  I Q M  +GC+P   TY TLI G    G+ E + KLL+ + Q 
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI-QM 603

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG-IQPDAVTYNTLARAYAQYGETY 187
           K +      YN +++    K    EA N+  +M+      PDAV+Y  + R     G   
Sbjct: 604 KGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPI 663

Query: 188 R-AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL------YRMKELEVHPNL 240
           R A   L E+      P   +  ++  G       E  ++ +       R  E EV    
Sbjct: 664 REAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEV---- 719

Query: 241 VVFNSLIKGFLDIK 254
               S++KG L I+
Sbjct: 720 ----SMVKGLLKIR 729



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/196 (20%), Positives = 86/196 (43%), Gaps = 1/196 (0%)

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV-KAGIEPDIHVFSI 315
           D + K L  M+    +    TF  ++++++   L  +   + D M+ + G++PD H ++ 
Sbjct: 100 DDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNR 159

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           +    V     +  E     M  +G+ P+V  F  +I   C A +++ A+ + E M   G
Sbjct: 160 MLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYG 219

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           + P+ KT+ T++ GY E      A  + + M E G      ++ ++   +   G   +A 
Sbjct: 220 LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279

Query: 436 RVLKSAEEDRQSMPNK 451
             ++         P++
Sbjct: 280 NFIQEMSNQDGFFPDQ 295


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 212/429 (49%), Gaps = 2/429 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++LV  G+  EA +I + L+  G + +++  TTL+     Q+  +  L +  +  +DG+
Sbjct: 254 VDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGL 313

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + +  +I  C+E G  ++A ++ ++M+D G  P+T+ +N +IKG  N    ++++ 
Sbjct: 314 VPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVS 373

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M+ D  + P+  TYNIL+   C +  I EA N+  KM  +G++P  VTY++L   Y
Sbjct: 374 LFKEMA-DSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCY 431

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A ++  EM      PN  T   ++ G+  +   + A   L  MK+  V  N 
Sbjct: 432 CVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCND 491

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +N+LI G   +     V + L   E  G  P  +T+++I++ +  AG+MG    ++  
Sbjct: 492 YTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQ 551

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   GI P+I  ++    GY +      A  +L  +R  G+ P++  + ++I G+C    
Sbjct: 552 MCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGN 611

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M  A+ +   M + G+ PN+  Y + + GY   K    A    + M ++G+    +T   
Sbjct: 612 MSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTT 671

Query: 421 VADSWRAIG 429
           + D +   G
Sbjct: 672 LIDGFSKDG 680



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 200/399 (50%), Gaps = 42/399 (10%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   TY  L+  L ++++ +  L+L  K+ + G+KP  + +++++     +G +DEA+K+
Sbjct: 384 PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKL 443

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           + +M   G  P   TY TL+KG+ N    +++  LL  M Q+  V  ND TYN L+   C
Sbjct: 444 YTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQN-GVSCNDYTYNTLINGLC 502

Query: 147 -------------------------SKNSI----------EEAWNVVYKMVASGIQPDAV 171
                                    + NSI            A+ V  +M A GI P+ V
Sbjct: 503 VVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIV 562

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
           TY +    Y +      A +ML +++   +RP+      ++ G+C+EGNM  A++ L  M
Sbjct: 563 TYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLM 622

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSA 288
            +  + PN+ V+NS I G+ ++K    +++AL   E+    G+  D  T++T++D +S  
Sbjct: 623 LKDGLLPNISVYNSFITGYKNLK---MMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKD 679

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
           G +    +++ +MV  G  PD   F+ L  G  R G+   A  +L  M +  + PNV+M+
Sbjct: 680 GNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMY 739

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
             +I+G+    K+Q A  ++++M E  I P+  TY+ L+
Sbjct: 740 NMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/415 (23%), Positives = 195/415 (46%), Gaps = 2/415 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           + G  P   T+ ++V  L +  R +  L +  ++   G K   +L   +++       V 
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +A+ IF++    G  PT  TY  LI+G    G PE++ +L + M +D  + P+   +N++
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQM-RDHGLLPSTNEFNMV 358

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           ++   +    ++A ++  +M  SGI PDA TYN L     Q  +   A  +  +M    V
Sbjct: 359 IKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGV 417

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           +P   T   ++  YC  G M++A++    M      PN+V + +L+KG ++    D    
Sbjct: 418 KPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYA 477

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            L  M++ GV  +  T++T+++     G + +  E+       G  P    ++ +  G++
Sbjct: 478 LLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFI 537

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           +AG    A ++   M   G+ PN+V +T+ I G+C       A+ +   +   G+ P++ 
Sbjct: 538 KAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIA 597

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            Y +L++G+ +      A ++L +M + G+ P  S        ++ + +  EA R
Sbjct: 598 AYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALR 652



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 111/460 (24%), Positives = 198/460 (43%), Gaps = 72/460 (15%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P   + T L+A   R       L+L++++   G   D+ +F+ ++ AC + G  D+A
Sbjct: 137 GVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGMYDDA 196

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +++F +M  S  +P     +  I     +     +L +L+ M QD    P D T+N +V 
Sbjct: 197 VRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKM-QDAGFVPWDFTFNSVVD 255

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
                  +EEA ++  +++A+G +   V   TL   Y    E  +A  +  E   + + P
Sbjct: 256 VLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVP 315

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK--------- 254
            + T  +++ G  +EG  E A     +M++  + P+   FN +IKG L+ K         
Sbjct: 316 TDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLF 375

Query: 255 ----DSDGVDKALTL----------------------MEEFGVKPDVVTFSTIMDAWSSA 288
               DS G+  A T                       M E GVKP +VT+ +++  +   
Sbjct: 376 KEMADS-GIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVN 434

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
           G M +  +++ +M   G  P++  ++ L KG++      KA ++L  M++ GV  N   +
Sbjct: 435 GCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTY 494

Query: 349 TTVISGWC-----------------------------------NAVKMQRAMSIYEKMCE 373
            T+I+G C                                    A  M  A ++Y++MC 
Sbjct: 495 NTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCA 554

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            GI PN+ TY + + GY +      A ++L  +  KG+RP
Sbjct: 555 KGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRP 594



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 36/288 (12%)

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           M A G+ PDA +   L    A+      A  +L EM+      +     +++    KEG 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
            +DA+R    M   E+ P+  V +  I     ++D++     L  M++ G  P   TF++
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 281 IMDAWSSAGLM---------------------------GKC--------QEIFDDMVKAG 305
           ++D     G M                           G C         +IF++ ++ G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + P    +++L +G    G P+KA  +   MR +G+ P+   F  VI G  N    + A+
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           S++++M + GI P+  TY  L+    + ++   A  L + M E GV+P
Sbjct: 373 SLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKP 419


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 205/443 (46%), Gaps = 38/443 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD--GMKPDSI 65
           G+  +    F  L+  G RP    +  +V A          L+++ ++ +      PD+ 
Sbjct: 136 GRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAF 195

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            +N +I     SG   +A+K+F +M D G  P   TYNT+I G+   G  E   +L   M
Sbjct: 196 SYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQM 255

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
             D   KPN  TYN+L+   C    ++E   ++ +M +  + PD  TY+ L     + GE
Sbjct: 256 LHD-GPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGE 314

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
           +     +  E     V     TC I+++G CK+G +  A + L  +    + P  V++N+
Sbjct: 315 SRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNT 374

Query: 246 LIKGFLDIKDSDG--------------------------------VDKALTL---MEEFG 270
           LI G+  ++D  G                                V KA  L   ME+ G
Sbjct: 375 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 434

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           V P V TF+T++DA+ +AG + KC  +  DM + GI+ D+  F  + K + + G+  +A 
Sbjct: 435 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAV 494

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           +IL  M    V PN  ++ ++I  +  +   ++A  + EKM   G++ ++ TY  LL G 
Sbjct: 495 AILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGL 554

Query: 391 GEAKQPWRAEELLQVMEEKGVRP 413
             + Q   AEEL+  +  +G+RP
Sbjct: 555 CRSSQIDEAEELIYTLRNQGLRP 577



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 211/455 (46%), Gaps = 40/455 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  +F+ +++ G  P  ITY T++    +    ++   L  ++  DG KP+ + +
Sbjct: 208 GKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTY 267

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +++    +G +DE   +  +M      P   TY+ L  G    G   ES  +L L ++
Sbjct: 268 NVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTG---ESRTMLSLFAE 324

Query: 128 D--KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
              K V     T +IL+   C    + +A  V+  +V +G+ P  V YNTL   Y Q  +
Sbjct: 325 SLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRD 384

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A  +  +M++  +RP+  T   +++G CK   +  A   +  M++  V P++  FN+
Sbjct: 385 LRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNT 444

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           LI  +      +     L+ M++ G+K DV++F +++ A+   G + +   I DDM+   
Sbjct: 445 LIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKD 504

Query: 306 IEPDIHVFS-----------------------------------ILAKGYVRAGEPQKAE 330
           + P+  V++                                   +L KG  R+ +  +AE
Sbjct: 505 VAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAE 564

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            ++ ++R  G+ P+VV + T+IS  CN     +A+ + ++M + GI P L+TY TL+   
Sbjct: 565 ELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSAL 624

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
             A +    E L Q M  K V P  S   ++ D++
Sbjct: 625 ASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAY 659



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 200/408 (49%), Gaps = 1/408 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  E   + + +      P   TY+ L   LTR    +++LSL ++  K G+   
Sbjct: 274 LCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLG 333

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +   + ++N   + G V +A ++ + +  +G  PTT  YNTLI GY  V     +  + +
Sbjct: 334 AYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFE 393

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + ++++P+  TYN L+   C    + +A ++V +M  SG+ P   T+NTL  AY   
Sbjct: 394 QM-KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTA 452

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+  +   +L +MQ   ++ +  + G +V  +CK G + +A+  L  M   +V PN  V+
Sbjct: 453 GQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVY 512

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           NS+I  +++  D++     +  M+  GV   +VT++ ++     +  + + +E+   +  
Sbjct: 513 NSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRN 572

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ PD+  ++ +       G+  KA  +L  M KYG+ P +  + T++S   +A ++  
Sbjct: 573 QGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHD 632

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
              +Y++M    + P+   Y  ++  Y   +   +   L + M EKG+
Sbjct: 633 MECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 180/341 (52%), Gaps = 1/341 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  +A  +   L+  G  PT + Y TL+    + +  +    +  +++   +
Sbjct: 341 LNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHI 400

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD I +NA+IN   +   V +A  +  +M+ SG  P+  T+NTLI  YG  G+ E+   
Sbjct: 401 RPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFT 460

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M Q K +K +  ++  +V+A+C    I EA  ++  M+   + P+A  YN++  AY
Sbjct: 461 VLSDMQQ-KGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 519

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+T +A  ++ +M+N+ V  +  T  +++ G C+   +++A   +Y ++   + P++
Sbjct: 520 IESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDV 579

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N++I    +  D+D   + L  M ++G++P + T+ T++ A +SAG +   + ++  
Sbjct: 580 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQ 639

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           M+   +EP   ++ I+   YVR     K  S+   M + G+
Sbjct: 640 MLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 130/254 (51%), Gaps = 3/254 (1%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           + G  P++ T+ TL+ A     + +   +++S +++ G+K D I F +++ A  ++G + 
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           EA+ I   M      P    YN++I  Y   G  E++  L++ M ++  V  +  TYN+L
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM-KNSGVSASIVTYNLL 550

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           ++  C  + I+EA  ++Y +   G++PD V+YNT+  A    G+T +A ++L EM    +
Sbjct: 551 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 610

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLY-RMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           RP  RT   +VS     G + D M  LY +M    V P+  ++  ++  ++  ++   V 
Sbjct: 611 RPTLRTYHTLVSALASAGRVHD-MECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVA 669

Query: 261 KALTLMEEFGVKPD 274
                M E G+  D
Sbjct: 670 SLKKEMSEKGIAFD 683


>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
          Length = 702

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 212/444 (47%), Gaps = 36/444 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F+ + + G+ P + TY  +   L ++ RF ++L ++ ++ + G  P+ + +
Sbjct: 279 GRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTW 338

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N M+  C + G  D   ++   MK  G + +  TYNTLI  YG  G              
Sbjct: 339 NTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGS------------- 385

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                   RTY               A+ +  +M++SG  P   TYN L    ++ G+  
Sbjct: 386 --------RTY---------------AFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWS 422

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A+ ++ +M  N  +PN+++  +++  Y K GN          +    + P+ V+  +L+
Sbjct: 423 TAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLV 482

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
                 +  +GV+KA   ++  G KPD+V F++++  ++  GL  K  E+FD + ++G+ 
Sbjct: 483 IANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLS 542

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+  ++ L   Y ++ E  +AE IL  ++   V P+VV + TVI+G+C    ++ A  I
Sbjct: 543 PDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRI 602

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
             +M   G+ P + TY TL+ GY   +    A E++  M    ++P + T + V DS+  
Sbjct: 603 LSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCK 662

Query: 428 IGLAREAKRVLKSAEEDRQSMPNK 451
                EA+  L    +  Q+   K
Sbjct: 663 AKRYDEAREFLSEISDTDQNFDQK 686



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 210/459 (45%), Gaps = 42/459 (9%)

Query: 20  LIEE----GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           L+EE    G  P   T +T++AA  R       ++    ++  G  P  + +NA++    
Sbjct: 147 LLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFG 206

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           ++GN  EA+++ ++M+DSGC+P   TYN L   Y   G  EE+ K L  M+  K + PN 
Sbjct: 207 KAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTS-KGLLPNT 265

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TYN ++ A+ +   ++EA  +  +M  +G  P+  TYN +     +        +ML E
Sbjct: 266 FTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEE 325

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAM-RFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           M  +   PN  T   +++  C +  MED + R L  MK   V  +   +N+LI  +    
Sbjct: 326 MSRSGCTPNRVTWNTMLA-VCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCG 384

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
                 K    M   G  P + T++ +++  S  G     Q I   M+K G +P+   +S
Sbjct: 385 SRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYS 444

Query: 315 ILAKGYVRAGEPQKAESI-----------------------------------LTSMRKY 339
           +L + Y + G     ESI                                      ++  
Sbjct: 445 LLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQ 504

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
           G  P++V+F ++++ +       +A  +++ + + G++P+L TY +L+  Y ++ + W A
Sbjct: 505 GYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEA 564

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           E++L+ ++   V+P   +   V + +   GL +EA+R+L
Sbjct: 565 EKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRIL 603



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 115/476 (24%), Positives = 213/476 (44%), Gaps = 39/476 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDG 59
           ++ L   G+   A  +F  L  +G  PT++TY  ++    R  R +  I++L+ ++   G
Sbjct: 96  LHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAG 155

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           ++PD    + +I AC   G +D+A+  F+ +K  G  P   TYN L++ +G  G   E+L
Sbjct: 156 VEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEAL 215

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           ++L+ M +D   +P+  TYN L   +      EEA   +  M + G+ P+  TYNT+  A
Sbjct: 216 RVLKEM-EDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTA 274

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           YA  G    A  +   M+ N   PN  T  +I     K+      +  L  M      PN
Sbjct: 275 YANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPN 334

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            V +N+++         D V + L  M+  GV+    T++T++ A+   G      +++D
Sbjct: 335 RVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYD 394

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN--------------- 344
           +M+ +G  P +  ++ L     R G+   A+SI++ M K G  PN               
Sbjct: 395 EMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGG 454

Query: 345 ---------------------VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
                                V++ T VI+ +    +++     ++++   G  P+L  +
Sbjct: 455 NAAGIESIEKEVYVGTIFPSWVILRTLVIANF-KCRRLEGVEKAFQEVKAQGYKPDLVIF 513

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            ++L  Y +     +A E+   +++ G+ P   T   + D +     + EA+++LK
Sbjct: 514 NSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILK 569



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 171/398 (42%), Gaps = 42/398 (10%)

Query: 35  LVAALTRQKRFKSILSLISKVE-KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS 93
           +V AL R+ +   +  L+ ++    G + D   +  +++A S +G  + A+++F +++  
Sbjct: 59  VVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQ 118

Query: 94  GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR----------------- 136
           G  PT  TYN ++  YG +G+    +  L    +   V+P+D                  
Sbjct: 119 GVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQ 178

Query: 137 ------------------TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
                             TYN L++ +    +  EA  V+ +M  SG QPDAVTYN LA 
Sbjct: 179 AVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAG 238

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            YA+ G    A + L  M +  + PN  T   +++ Y   G +++A+    RMK+    P
Sbjct: 239 TYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVP 298

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           N+  +N LI G L  K        L ++EE    G  P+ VT++T++      G+     
Sbjct: 299 NVNTYN-LIFGMLGKKSR--FTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVT 355

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
            + + M   G+E     ++ L   Y R G    A  +   M   G  P +  +  +++  
Sbjct: 356 RVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVL 415

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
                   A SI  KM + G  PN ++Y  LL  Y + 
Sbjct: 416 SRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKG 453



 Score = 39.7 bits (91), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 20/93 (21%), Positives = 45/93 (48%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   EA  I + +I +G  P ++TY TLV      + F     +++ +    +
Sbjct: 587 INGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNL 646

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDS 93
           KP  + +  ++++  ++   DEA +   ++ D+
Sbjct: 647 KPMELTYRRVVDSYCKAKRYDEAREFLSEISDT 679


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 199/405 (49%), Gaps = 7/405 (1%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           + CL+      T ++   LV    ++ R +  L  + +V ++G  PD + FN+++N    
Sbjct: 222 YGCLL------TNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCR 275

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
            GNV++A+ I   M + G  P   TYN+LI G   +G+ E+++++LQ M   +   PN  
Sbjct: 276 IGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMIL-RECSPNTV 334

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           TYN L+ A C +N IE A ++   +V+ G+ PD  T+NTL +          A +M  EM
Sbjct: 335 TYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEM 394

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
           +N   +P+E T  I++   C E  +++A+  L  M+      N VV+N+LI G    +  
Sbjct: 395 KNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRI 454

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           +  ++    ME  GV    VT++T++D       + +  ++ D M+  G++PD   ++ L
Sbjct: 455 EDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSL 514

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
              + R G+ +KA  I+ +M   G  P++  + T+I G C A ++  A  +   +   GI
Sbjct: 515 LTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGI 574

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
                 Y  ++      K+      L + M EK   P   T ++V
Sbjct: 575 VLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIV 619



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 215/443 (48%), Gaps = 3/443 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N LV   K      + + ++ EG    + T+  L+ AL +  + +  + ++ ++   G+
Sbjct: 130 LNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGL 189

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD I F  ++    E G+++ A+K+ ++M   GC  T  +   L+ G+   G+ EE+L+
Sbjct: 190 KPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALR 249

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            +  +S++    P+  T+N LV  +C   ++ +A ++V  M+  G  PD  TYN+L    
Sbjct: 250 FVLEVSEE-GFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGM 308

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + GE  +A ++L +M   +  PN  T   ++S  CKE  +E A      +    + P++
Sbjct: 309 CKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDV 368

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FN+LI+G    K+ D   +    M+  G KPD  T+S ++D+      + +   +  +
Sbjct: 369 CTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKE 428

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M  +G   +  V++ L  G  ++   + AE I   M   GV  + V + T+I G C   +
Sbjct: 429 MESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKR 488

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI-Q 419
           ++ A  + ++M   G+ P+  TY +LL  +       +A +++Q M   G  P   T   
Sbjct: 489 VEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGT 548

Query: 420 LVADSWRAIGLAREAKRVLKSAE 442
           L+    RA G    A ++L+S +
Sbjct: 549 LIGGLCRA-GRVDVASKLLRSVQ 570



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 194/399 (48%), Gaps = 7/399 (1%)

Query: 44  RFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYN 103
           +F ++ +  S      + P+  L   +    ++S + D    + +++K SG  P  +T+ 
Sbjct: 39  KFPTLCTTPSSTTHHPLPPNETLLLQL----TQSSSFDSITTLLKQLKSSGSIPNATTFA 94

Query: 104 TLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVA 163
           TLI+ + N  + E  LK+L+    +   KP+   YNI + A    N ++    +  KMV 
Sbjct: 95  TLIQSFTNFHEIENLLKILE---NELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVN 151

Query: 164 SGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED 223
            GI  D  T+N L +A  +  +   A  ML EM N+ ++P+E T   ++ G+ +EG++  
Sbjct: 152 EGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNG 211

Query: 224 AMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD 283
           A++   +M         V    L+ GF      +   + +  + E G  PD VTF+++++
Sbjct: 212 ALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVN 271

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
            +   G +    +I D M++ G +PD++ ++ L  G  + GE +KA  IL  M      P
Sbjct: 272 GFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSP 331

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           N V + T+IS  C   +++ A  +   +   G+ P++ T+ TL+ G   +K    A E+ 
Sbjct: 332 NTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMF 391

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           + M+ KG +P + T  ++ DS       +EA  +LK  E
Sbjct: 392 EEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEME 430



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 1/160 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  I   +   G  P + TY TL+  L R  R      L+  V+  G+      +
Sbjct: 522 GDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAY 581

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I A        E M++F++M +    P   T+  + +G  N G P +      +   
Sbjct: 582 NPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEML 641

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ 167
           +K + P   ++  L    CS  S+E+    +  MV    Q
Sbjct: 642 EKGILPEFPSFGFLAEGLCSL-SMEDTLIELINMVMEKAQ 680


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 204/410 (49%), Gaps = 1/410 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G+  +A+ +F  +++ G +P ++TYTT++  L + +       +  ++   G+
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD+  +N +I+     G   E +++ ++M   G KP   TY +L+    N G+  E+  
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M + K +KPN   Y IL+  + +K ++ E  +++  MV +G+ PD   +N +  AY
Sbjct: 330 LFDSMIR-KGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+      A  +  +M+   + P+    G ++   CK G ++DA+    +M    V PN+
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            VFNSL+ G   +   +   +    M   G++PDVV F+TI+    + G + K Q + D 
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL 508

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M + G  P +  ++ L  G+   G   +A   L  M   G+ P+   + T++ G+C A +
Sbjct: 509 MERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +  A  ++ +M   GI P + TY T+L G    ++   A+EL   M   G
Sbjct: 569 IDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSG 618



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 193/388 (49%), Gaps = 3/388 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P +++Y  ++     + +     +L  ++   G++P+ + +  +I+   ++  VD A  +
Sbjct: 201 PNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGV 260

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           FQ+M D G KP   TYN LI GY ++GK +E +++L+ MS    +KP+  TY  L+   C
Sbjct: 261 FQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSA-HGLKPDCYTYGSLLNYLC 319

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           +     EA  +   M+  GI+P+   Y  L   YA  G       +L  M  N + P+  
Sbjct: 320 NNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHH 379

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI-KDSDGVDKALTL 265
              II + Y K+  +++AM    +MK+  + P++V + +LI     + +  D V K   +
Sbjct: 380 IFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQM 439

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M E GV P++  F++++    +     K +E + +M+  GI PD+  F+ +       G+
Sbjct: 440 MNE-GVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQ 498

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             KA+ ++  M + G  P V+ +TT+I G C   ++  A    + M  +G+ P+  TY T
Sbjct: 499 VMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNT 558

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           LL GY  A +   A  + + M   G+ P
Sbjct: 559 LLHGYCRAGRIDDAYGVFREMLRNGITP 586



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 208/465 (44%), Gaps = 43/465 (9%)

Query: 16  IFNCLIEEGH---RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           +FN +I E      P   TY+ L+    R  R +   +    + K G + ++I+ N ++ 
Sbjct: 78  LFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLK 137

Query: 73  ACSESGNVDEAMKIF-QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ---- 127
              ++  + EAM I  ++M + GC P   +YNTL+KG+ N  + EE+L+LL +M+     
Sbjct: 138 GLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGR 197

Query: 128 ---------------------------------DKNVKPNDRTYNILVRAWCSKNSIEEA 154
                                            D+ ++PN  TY  ++   C    ++ A
Sbjct: 198 SCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRA 257

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
             V  +M+  G++PD  TYN L   Y   G+     +ML EM  + ++P+  T G +++ 
Sbjct: 258 EGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNY 317

Query: 215 YCKEGNMEDAMRFLY-RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
            C  G   +A RFL+  M    + PN+ ++  LI G+        +   L LM E G+ P
Sbjct: 318 LCNNGRCREA-RFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSP 376

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           D   F+ I  A++   ++ +   IF+ M + G+ PD+  +  L     + G    A    
Sbjct: 377 DHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKF 436

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M   GV PN+ +F +++ G C   K ++A   Y +M   GI P++  + T+L      
Sbjct: 437 NQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTK 496

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            Q  +A+ L+ +ME  G RP   +   +      +G   EA + L
Sbjct: 497 GQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSL 541



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 195/421 (46%), Gaps = 4/421 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKS---ILSLISKVEKDGMKPDSILFNAMINACSESG 78
           E G  P +++Y TL+     +KR +    +L +++  +     P+ + +  +IN     G
Sbjct: 158 ELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEG 217

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
            VD+A  +F +M D G +P   TY T+I G       + +  + Q M  DK VKP++ TY
Sbjct: 218 QVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMI-DKGVKPDNDTY 276

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           N L+  + S    +E   ++ +M A G++PD  TY +L       G    A  +   M  
Sbjct: 277 NCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIR 336

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
             ++PN    GI++ GY  +G + +    L  M E  + P+  +FN +   +      D 
Sbjct: 337 KGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDE 396

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
                  M++ G+ PDVV +  ++DA    G +      F+ M+  G+ P+I VF+ L  
Sbjct: 397 AMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVY 456

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           G     + +KA+     M   G+ P+VV F T++   C   ++ +A  + + M  +G  P
Sbjct: 457 GLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRP 516

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            + +Y TL+ G+    +   A + L VM   G++P + T   +   +   G   +A  V 
Sbjct: 517 GVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVF 576

Query: 439 K 439
           +
Sbjct: 577 R 577



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/465 (23%), Positives = 214/465 (46%), Gaps = 3/465 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EA ++F+ +I +G +P +  Y  L+     +     +  L++ + ++G+
Sbjct: 315 LNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGL 374

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES-L 119
            PD  +FN +  A ++   +DEAM IF KMK  G  P    Y  LI     +G+ +++ L
Sbjct: 375 SPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVL 434

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K  Q+M++   V PN   +N LV   C+ +  E+A    ++M+  GI+PD V +NT+   
Sbjct: 435 KFNQMMNE--GVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCN 492

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
               G+  +A++++  M+    RP   +   ++ G+C  G +++A + L  M  + + P+
Sbjct: 493 LCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPD 552

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
              +N+L+ G+      D        M   G+ P VVT+STI+    +     + +E++ 
Sbjct: 553 EWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYL 612

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M+ +G + +I +++I+  G  +     +A  +  S+        +  F  +I     + 
Sbjct: 613 NMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSG 672

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           + + AM ++  +   G+ P++ TY  +     E       ++L   ME+ G  P    + 
Sbjct: 673 RNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLN 732

Query: 420 LVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQ 464
            +       G    A   L   +E   S+      + +  + R +
Sbjct: 733 ALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDE 777



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/487 (22%), Positives = 210/487 (43%), Gaps = 39/487 (8%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F  +I++G +P   TY  L+       ++K ++ ++ ++   G+KPD   + +++N
Sbjct: 257 AEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLN 316

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
               +G   EA  +F  M   G KP  + Y  LI GY   G   E   LL LM ++  + 
Sbjct: 317 YLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVEN-GLS 375

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET------ 186
           P+   +NI+  A+  K  I+EA ++  KM   G+ PD V Y  L  A  + G        
Sbjct: 376 PDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLK 435

Query: 187 -----------------------------YRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
                                         +A++  FEM N  +RP+      I+   C 
Sbjct: 436 FNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCT 495

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
           +G +  A R +  M+ +   P ++ + +LI G   +   D   K+L +M   G+KPD  T
Sbjct: 496 KGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWT 555

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           ++T++  +  AG +     +F +M++ GI P +  +S +  G        +A+ +  +M 
Sbjct: 556 YNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMI 615

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
             G   N+ ++  +++G      +  A  +++ +C       + T+  ++    ++ +  
Sbjct: 616 TSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNE 675

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK--DEI 455
            A  L   +   G+ P   T  L+A++    G   E   +  SA E   + PN +  + +
Sbjct: 676 DAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLF-SAMEKSGTTPNSRMLNAL 734

Query: 456 AVESIHR 462
               +HR
Sbjct: 735 VRRLLHR 741



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/415 (22%), Positives = 195/415 (46%), Gaps = 13/415 (3%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKS-------ILSLISKVEKD---GMK 61
           +A  +F+ L+      ++I +  L+ A++R    +S       ++SL +++ ++    + 
Sbjct: 32  DALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVT 91

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           PD   ++ +I      G ++     F  +  SG +      N L+KG  +  +  E++ +
Sbjct: 92  PDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDI 151

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS---GIQPDAVTYNTLAR 178
           L     +    P+  +YN L++ +C++   EEA  +++ M  S      P+ V+Y  +  
Sbjct: 152 LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVIN 211

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            +   G+  +A  +  EM +  ++PN  T   ++ G CK   ++ A     +M +  V P
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           +   +N LI G+L I     V + L  M   G+KPD  T+ ++++   + G   + + +F
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLF 331

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           D M++ GI+P++ ++ IL  GY   G   +   +L  M + G+ P+  +F  + + +   
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             +  AM I+ KM + G++P++  Y  L+    +  +   A      M  +GV P
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAP 446



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/386 (23%), Positives = 179/386 (46%), Gaps = 21/386 (5%)

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVG-------KPEESLKLLQLMSQ 127
           S S  +D+A+K+F  +       +   +N L+     V        + E  + L   M +
Sbjct: 25  SGSLGLDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIR 84

Query: 128 DKNVK--PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           +  +K  P+  TY+IL+  +C    +E  +     ++ SG + + +  N L +       
Sbjct: 85  ECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKR 144

Query: 186 TYRAEQMLFE-MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE---VHPNLV 241
              A  +L + M      P+  +   ++ G+C E   E+A+  L+ M + +     PN+V
Sbjct: 145 LCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVV 204

Query: 242 VFNSLIKGFLDIKDSDG-VDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
            +  +I GF     ++G VDKA  L  E    G++P+VVT++T++D    A ++ + + +
Sbjct: 205 SYAIVINGFF----TEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGV 260

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F  M+  G++PD   ++ L  GY+  G+ ++   +L  M  +G+ P+   + ++++  CN
Sbjct: 261 FQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCN 320

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             + + A  +++ M   GI PN+  Y  L+ GY          +LL +M E G+ P    
Sbjct: 321 NGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHI 380

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEE 443
             ++  ++    +  EA  +    ++
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQ 406


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 182/358 (50%), Gaps = 1/358 (0%)

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKD-SGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +P+++ +N +I      G V  A+++ ++M++  G  P   TY TLI G+  +G+ E+++
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAV 203

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K+   M     V P+   YN L+  +C    ++ A      MV  GI     TYN L  A
Sbjct: 204 KVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHA 263

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
                    A  +L EMQ N   P+  T  I+++GYCKEGN + A+     M +  V   
Sbjct: 264 LFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRAT 323

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            V + SLI  F         D+   +  + G++PDVV ++ ++++  + G M +  EI  
Sbjct: 324 AVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMA 383

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M K  I PD   ++ L +G+   G   +A +++  M K G+ P++V + T+ISG+    
Sbjct: 384 EMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKG 443

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            ++ A+ + ++M + G NP L TY  L+ G  + +Q   AE L++ M  KG+ P  ST
Sbjct: 444 DIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDST 501



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 197/388 (50%), Gaps = 7/388 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKV-EKDGMKP 62
           L   GKP  A      L+ +  RP  +TY T++A    + R ++ L ++ ++ E+ G+ P
Sbjct: 126 LCATGKPVRALE----LLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAP 181

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSG-CKPTTSTYNTLIKGYGNVGKPEESLKL 121
           D   +  +I+   + G +++A+K+F +M   G   P+   YN LI GY +VGK + +L+ 
Sbjct: 182 DKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQY 241

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
            + M Q + +     TYN+L+ A        +A+ V+ +M  +G  PD  TYN L   Y 
Sbjct: 242 REDMVQ-RGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYC 300

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           + G   +A ++  EM    VR    T   ++  + ++G +++  R      +  + P++V
Sbjct: 301 KEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVV 360

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
           ++N+LI       D +   + +  ME+  + PD +T++T+M  +   G + + + + D+M
Sbjct: 361 MYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEM 420

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
            K GI+PD+  ++ L  GY   G+ + A  +   M   G +P ++ +  +I G C   + 
Sbjct: 421 TKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQG 480

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWG 389
             A ++ ++M   GI P+  TY +L+ G
Sbjct: 481 DDAENLMKEMVAKGITPDDSTYISLIEG 508



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 184/380 (48%), Gaps = 17/380 (4%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           FN M+     +G    A+++ ++M     +P   TYNT+I G+   G+ + +L++++ M 
Sbjct: 119 FNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALEVMREMR 174

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG-IQPDAVTYNTLARAYAQYGE 185
           +   + P+  TY  L+  WC    +E+A  V  +M+  G + P AV YN L   Y   G+
Sbjct: 175 ERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGK 234

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A Q   +M    +     T  +++     +    DA   L  M++    P++  +N 
Sbjct: 235 LDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNI 294

Query: 246 LIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           LI G+    +     KAL + EE    GV+   VT+++++  +S  G + +   +F+  V
Sbjct: 295 LINGYCKEGNEK---KALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAV 351

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           K GI PD+ +++ L   +   G+ ++A  I+  M K  + P+ + + T++ G+C   ++ 
Sbjct: 352 KKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLD 411

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGY---GEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
            A ++ ++M + GI P+L +Y TL+ GY   G+ K   R  +    M +KG  P   T  
Sbjct: 412 EARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRD---EMMDKGFNPTLMTYN 468

Query: 420 LVADSWRAIGLAREAKRVLK 439
            +      I    +A+ ++K
Sbjct: 469 ALIQGLCKIRQGDDAENLMK 488



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 171/342 (50%), Gaps = 9/342 (2%)

Query: 99  TSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVV 158
           T+T+N +++     GKP  +L+LL+ M      +PN  TYN ++  +C++  ++ A  V+
Sbjct: 116 TTTFNIMLRHLCATGKPVRALELLRQMP-----RPNAVTYNTVIAGFCARGRVQAALEVM 170

Query: 159 YKMVA-SGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM-QNNQVRPNERTCGIIVSGYC 216
            +M    GI PD  TY TL   + + G    A ++  EM    +V P+      ++ GYC
Sbjct: 171 REMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYC 230

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG-FLDIKDSDGVDKALTLMEEFGVKPDV 275
             G ++ A+++   M +  +   +  +N L+   F+D + SD     L  M++ G  PDV
Sbjct: 231 DVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAY-AVLEEMQKNGFSPDV 289

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
            T++ +++ +   G   K  E+F++M + G+      ++ L   + R G+ Q+ + +   
Sbjct: 290 FTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNV 349

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
             K G+ P+VVM+  +I+  C    M+RA  I  +M +  I P+  TY TL+ G+    +
Sbjct: 350 AVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGR 409

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
              A  L+  M ++G++P   +   +   +   G  ++A RV
Sbjct: 410 LDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRV 451



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 121/221 (54%), Gaps = 5/221 (2%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NIL+     +G   +A  +F  + ++G R T +TYT+L+   +R+ + +    L +   K
Sbjct: 293 NILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVK 352

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G++PD +++NA+IN+    G+++ A +I  +M+     P   TYNTL++G+  +G+ +E
Sbjct: 353 KGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDE 412

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +  L+  M++ + ++P+  +YN L+  +  K  I++A  V  +M+  G  P  +TYN L 
Sbjct: 413 ARTLIDEMTK-RGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALI 471

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
           +   +  +   AE ++ EM    + P++ T   ++ G   E
Sbjct: 472 QGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTE 512



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 129/276 (46%), Gaps = 6/276 (2%)

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
           T+N + R     G+  RA ++L +M     RPN  T   +++G+C  G ++ A+  +  M
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALEVMREM 173

Query: 232 KELE-VHPNLVVFNSLIKGFLDI-KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
           +E   + P+   + +LI G+  I +  D V     ++ +  V P  V ++ ++  +   G
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVG 233

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
            +    +  +DMV+ GI   +  +++L            A ++L  M+K G  P+V  + 
Sbjct: 234 KLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYN 293

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
            +I+G+C     ++A+ ++E+M + G+     TY +L++ +    Q    + L  V  +K
Sbjct: 294 ILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKK 353

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
           G+RP       + +S    G    A  ++   E+ R
Sbjct: 354 GIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKR 389


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 221/444 (49%), Gaps = 7/444 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGH---RPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           +  L  +G    A  +   +  E H   RP  ++YT L+ AL   +     + L+  +  
Sbjct: 84  LTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRS 143

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G++ D + +  +I    ++  VD+A+++  +M +SG +P    Y++L++GY   G+ E+
Sbjct: 144 AGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWED 203

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
             K+   MS+ K ++P+   Y  L+ + C     ++A  V+  MV  G++P+ VTYN L 
Sbjct: 204 VGKVFVEMSE-KGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLI 262

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-- 235
               + G    A  +L +M    V P+  T   ++ G      M++AM  L  M   +  
Sbjct: 263 NCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNI 322

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           V PN+V FNS+I+G  DI       +   +MEE G   ++VT++ ++        + K  
Sbjct: 323 VKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAM 382

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           E+ D+M   G+EPD   +SIL KG+ +  +  +AE +L++MR  G+ P +  +  ++   
Sbjct: 383 ELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAM 442

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C    M+RA +++ +M +     ++  Y T++ G  +A     A+ELL+ + ++G+ P  
Sbjct: 443 CEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDA 501

Query: 416 STIQLVADSWRAIGLAREAKRVLK 439
            T  +V + +   G    A  VLK
Sbjct: 502 VTYSIVINMFAKSGDMEAANGVLK 525



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 231/482 (47%), Gaps = 53/482 (10%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G R  ++TY TL+  L         + L+ ++ + G++P+ +++++++    +SG  ++ 
Sbjct: 145 GVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDV 204

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            K+F +M + G +P    Y  LI     VGK +++  ++ +M + + ++PN  TYN+L+ 
Sbjct: 205 GKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVR-RGLEPNVVTYNVLIN 263

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM--QNNQV 201
             C + S++EA  V+ KM   G+ PD VTYNTL +  +   E   A  +L EM    N V
Sbjct: 264 CMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIV 323

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           +PN  T   ++ G C  G M  A +    M+E     NLV +N LI G L +     V K
Sbjct: 324 KPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHK---VRK 380

Query: 262 ALTLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP---------- 308
           A+ LM+E    G++PD  T+S ++  +     + + +++   M   GIEP          
Sbjct: 381 AMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLV 440

Query: 309 ------------------------DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
                                   D+  +S +  G  +AG+ + A+ +L S+   G+ P+
Sbjct: 441 AMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPD 500

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
            V ++ VI+ +  +  M+ A  + ++M   G  P++  +++L+ GY    +  +  EL++
Sbjct: 501 AVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIR 560

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQ 464
            M  K +      I  ++ S  A   + E K +L       QS+P+   EI+  +I+  Q
Sbjct: 561 EMITKNIALDSKIISTLSTSLVA---SNEGKALL-------QSLPDFSAEISKGNINSPQ 610

Query: 465 NL 466
            L
Sbjct: 611 EL 612



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 195/382 (51%), Gaps = 6/382 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +   +F  + E+G  P ++ YT L+ +L +  + K    ++  + + G++P+ + +
Sbjct: 199 GRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTY 258

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +IN   + G+V EA+ + +KM + G  P   TYNTLIKG  +V + +E++ LL+ M +
Sbjct: 259 NVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVR 318

Query: 128 DKN-VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            KN VKPN  T+N +++  C    + +A+ V   M  +G   + VTYN L     +  + 
Sbjct: 319 GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKV 378

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A +++ EM +  + P+  T  I++ G+CK   ++ A   L  M++  + P L  +  L
Sbjct: 379 RKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPL 438

Query: 247 IKGFLDIKDSDGVDKALTLMEEF--GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +    +      +++A  L  E       DVV +ST++     AG +   +E+   +V  
Sbjct: 439 LVAMCE---QGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDE 495

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+ PD   +SI+   + ++G+ + A  +L  M   G  P+V +F ++I G+    ++ + 
Sbjct: 496 GLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKV 555

Query: 365 MSIYEKMCEIGINPNLKTYETL 386
           + +  +M    I  + K   TL
Sbjct: 556 LELIREMITKNIALDSKIISTL 577



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 161/325 (49%), Gaps = 4/325 (1%)

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKN--VKPNDRTYNILVRAWCSKNSIEEAWNVV 158
           +YNT++      G  + +  LL+ MS + +   +PN  +Y +L+RA C+    ++A  ++
Sbjct: 79  SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLL 138

Query: 159 YKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
             M ++G++ D VTY TL R      E  +A +++ EM  + + PN      ++ GYCK 
Sbjct: 139 RSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKS 198

Query: 219 GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTF 278
           G  ED  +    M E  + P++V++  LI     +  +      + +M   G++P+VVT+
Sbjct: 199 GRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTY 258

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM-- 336
           + +++     G + +   +   M + G+ PD+  ++ L KG     E  +A  +L  M  
Sbjct: 259 NVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVR 318

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
            K  V PNVV F +VI G C+  +M++A  +   M E G   NL TY  L+ G     + 
Sbjct: 319 GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKV 378

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLV 421
            +A EL+  M   G+ P   T  ++
Sbjct: 379 RKAMELMDEMTSLGLEPDSFTYSIL 403



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 155/307 (50%), Gaps = 5/307 (1%)

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVAS---GIQPDAVTYNTLARAYAQYGETYRAEQML 193
           +YN ++ A C +   + A  ++  M        +P+AV+Y  L RA        +A  +L
Sbjct: 79  SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLL 138

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
             M++  VR +  T G ++ G C    ++ A+  +  M E  + PN+VV++SL++G+   
Sbjct: 139 RSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKS 198

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
              + V K    M E G++PDVV ++ ++D+    G   K   + D MV+ G+EP++  +
Sbjct: 199 GRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTY 258

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           ++L     + G  ++A  +L  M + GV P+VV + T+I G  + ++M  AM + E+M  
Sbjct: 259 NVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVR 318

Query: 374 IG--INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
               + PN+ T+ +++ G  +  +  +A ++  +MEE G      T  L+      +   
Sbjct: 319 GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKV 378

Query: 432 REAKRVL 438
           R+A  ++
Sbjct: 379 RKAMELM 385



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 147/285 (51%), Gaps = 15/285 (5%)

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQ---NNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           DAV+YNT+  A  + G   RA  +L  M    +   RPN  +  +++   C +   + A+
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIM 282
             L  M+   V  ++V + +LI+G  D  +   VDKA+ LM E    G++P+VV +S+++
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAE---VDKAVELMGEMCESGIEPNVVVYSSLL 192

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
             +  +G      ++F +M + GIEPD+ +++ L     + G+ +KA  ++  M + G+ 
Sbjct: 193 QGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLE 252

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA----KQPWR 398
           PNVV +  +I+  C    ++ A+ + +KM E G+ P++ TY TL+ G  +     +  W 
Sbjct: 253 PNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWL 312

Query: 399 AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            EE+++   +  V+P   T   V      IG  R+A +V    EE
Sbjct: 313 LEEMVR--GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEE 355


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 203/407 (49%), Gaps = 39/407 (9%)

Query: 19  CLIEE---GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           CL EE      P + TY  L+    +  + +  L+L  +++K G+KP    +N+++    
Sbjct: 388 CLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYC 447

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G +DEA+K++ +M   G KP   TY TL++GY      + +  LL  M Q+  V  ND
Sbjct: 448 KKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQN-GVSCND 506

Query: 136 RTYNILVRAWCSKNSIEE-----------------------------------AWNVVYK 160
            TYN+L+   C  + + E                                   A+ V  +
Sbjct: 507 YTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQ 566

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           M   G+ P+ +TY +    Y + G +  A +ML +++   ++P+      +++G+C+EGN
Sbjct: 567 MREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGN 626

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           M  A++ L  + +  + PN VV+NSLI G+ ++     V K    M + G+  D  T++T
Sbjct: 627 MSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTT 686

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++D +S  G +    E++ +M+  G  PD   F+ L  G  R+G+   A+ +L  MR+  
Sbjct: 687 LIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLD 746

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           V PNV ++  +I+G+    K+Q A  ++++M  +GI P+  TY+ L+
Sbjct: 747 VRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 215/474 (45%), Gaps = 37/474 (7%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++LV  G+  EA  + + + + G +  +I  TTL+     ++   + L+L  +  KDG+
Sbjct: 269 VDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGI 328

Query: 61  KPDSILFNAMINACSESGNVDEAMKI---------------------------------- 86
            P  +++  +I  C + G   +A ++                                  
Sbjct: 329 VPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVC 388

Query: 87  -FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
            F++M DSG  P   TYN LI  +    K  E+L L   M +   VKP+  TYN L+  +
Sbjct: 389 LFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKK-AGVKPSINTYNSLLMGY 446

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C K  ++EA  +  +M   G +P+ VTY TL R Y    +   A  +L EM+ N V  N+
Sbjct: 447 CKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCND 506

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T  ++++G C    + +    L         P ++ +NS+I GF+              
Sbjct: 507 YTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQ 566

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M E G+ P+++T+++ +D +   G      ++ +D+ + G++PDI  ++ L  G+ + G 
Sbjct: 567 MREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGN 626

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
              A  +L  + K G+ PN V++ ++I+G+ N   M+     YE M + GI  +  TY T
Sbjct: 627 MSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTT 686

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           L+ G+ +      A EL   M  KG  P   T   +       G    AK++L+
Sbjct: 687 LIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLE 740



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/497 (21%), Positives = 207/497 (41%), Gaps = 68/497 (13%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+  + +G   +A  +F+ +      P    Y   + AL +       L ++ ++++ G 
Sbjct: 199 MSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGF 258

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCK------------------------ 96
                 +  M++   ++G ++EA+++  +M+D+G K                        
Sbjct: 259 DTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALN 318

Query: 97  -----------PTTSTYNTLIKGYGNVGKPEESLKLLQLMS------------------- 126
                      PT   Y  LI+G   VG  +++ +L + M+                   
Sbjct: 319 LFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLL 378

Query: 127 QDKNVK--------------PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT 172
            D+  K              P+  TYN L+   C  + + EA N+  +M  +G++P   T
Sbjct: 379 NDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINT 438

Query: 173 YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMK 232
           YN+L   Y + G    A ++  EM     +PN  T   ++ GY  + + ++A   L  MK
Sbjct: 439 YNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMK 498

Query: 233 ELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMG 292
           +  V  N   +N LI G   +     VD  L      G  P ++T+++I++ +  AG+MG
Sbjct: 499 QNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMG 558

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
               ++  M + G+ P+I  ++    GY R G    A  +L  +R+ G+ P++V +  +I
Sbjct: 559 SAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALI 618

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
           +G+C    M  A+ +   + + G+ PN   Y +L+ GY          +  + M + G+ 
Sbjct: 619 NGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIV 678

Query: 413 PKKSTIQLVADSWRAIG 429
              ST   + D +   G
Sbjct: 679 ADTSTYTTLIDGFSKDG 695



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/436 (23%), Positives = 195/436 (44%), Gaps = 6/436 (1%)

Query: 10  PHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNA 69
           P  A   +  ++  G  P + + T L+    R    K  L+L  ++   G + D+ +F+A
Sbjct: 138 PSAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDA 197

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK 129
           +++AC + G  ++A+++F +M  +   P    Y   I     +G    +L++L+ M ++ 
Sbjct: 198 LMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREM-KEV 256

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
                D TY  +V        +EEA  V  +M  +G + D +   TL R Y    E   A
Sbjct: 257 GFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNA 316

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
             +  E   + + P +   G+++ G  + G  + A     +M    + P+    + ++KG
Sbjct: 317 LNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKG 376

Query: 250 FLDIKDSDGVDKALTLMEEFGVK--PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            L+  D    D A+ L EE      PDV T++ ++     A  + +   +FD M KAG++
Sbjct: 377 LLN--DRRWKD-AVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVK 433

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P I+ ++ L  GY + G   +A  + + M   G  PNVV + T++ G+        A ++
Sbjct: 434 PSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYAL 493

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
            ++M + G++ N  TY  L+ G     +    + +L+    +G  P   T   + + +  
Sbjct: 494 LDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVK 553

Query: 428 IGLAREAKRVLKSAEE 443
            G+   A  V +   E
Sbjct: 554 AGMMGSAFTVYQQMRE 569



 Score = 45.4 bits (106), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 4/167 (2%)

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           + +  MV  G+ PDI   + L     R    + A ++   MR  G   +  MF  ++S  
Sbjct: 143 DTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSAC 202

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
                 + A+ ++++M    I+P+ + Y   +    +     RA  +L+ M+E G     
Sbjct: 203 LKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCD 262

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHR 462
            T + + D     G   EA RV     ++ +    K D I   ++ R
Sbjct: 263 FTYRTMVDVLVKTGRMEEALRV----NDEMRDAGKKMDVIVATTLMR 305


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 222/456 (48%), Gaps = 40/456 (8%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILS-LISKVEKDGMKPDSILF 67
           +P     +F C++  G +   IT +TL+  L    R +  ++ L+ ++ + G  P+   +
Sbjct: 172 RPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSY 231

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSG--CKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
           + ++    ++     A+ +FQ M   G  C P    YNT+I G+   G+  ++  L   M
Sbjct: 232 SIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEM 291

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           ++ + VKP+  TYN+++ A C   ++++A  V+ +M  +G QPD VTYN +   YA  G 
Sbjct: 292 TR-QGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGR 350

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A +M  +M++  + PN   C   ++  CK G  ++A      M      P++V + +
Sbjct: 351 LKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCT 410

Query: 246 LIKGF------------LDIKDSDG--------------------VDKAL---TLMEEFG 270
           L+ G+             +   S+G                    VD A+   T M++ G
Sbjct: 411 LLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQG 470

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           V PDVVT+ST++ A+S  G +    E F+ MV  GI+P+  V+  + +G+   G   KA+
Sbjct: 471 VSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAK 530

Query: 331 SILTSMRKYGV-HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
            +++ M   G+  P++V F +VI+  C   ++  A  I++ + +IG  P++ T+ +L+ G
Sbjct: 531 ELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDG 590

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           Y    +  +A ++L  ME  GV     T   + D +
Sbjct: 591 YCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGY 626



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 201/412 (48%), Gaps = 8/412 (1%)

Query: 10  PHEAHYIFNCLIEEGHRP-----TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           P  A  +FN +  E   P     T+ TY+ L+    R +R    L L   + + G+K   
Sbjct: 133 PALALALFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQ 192

Query: 65  ILFNAMINACSESGNVDEAMKIF-QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           I  + ++     +   +EA+ +   +M + GC P   +Y+ ++KG  +    + +L L Q
Sbjct: 193 ITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQ 252

Query: 124 LMSQDKNV-KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           +M+++     PN   YN ++  +  +    +A ++ ++M   G++PD VTYN +  A  +
Sbjct: 253 MMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCK 312

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                +AE +L +M  N  +P+  T   ++ GY   G +++A +   +MK   + PN+V+
Sbjct: 313 ARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVI 372

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
            NS +        S    +    M   G KPD+V++ T++  ++S G       +F+ M 
Sbjct: 373 CNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMK 432

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             GI  D  VF+IL   Y + G    A  I T M++ GV P+VV ++TVIS +    ++ 
Sbjct: 433 SNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLT 492

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV-RP 413
            AM  + +M   GI PN   Y +++ G+       +A+EL+  M  KG+ RP
Sbjct: 493 DAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRP 544



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 206/408 (50%), Gaps = 8/408 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  +A  +F+ +  +G +P ++TY  ++ AL + +       ++ ++  +G +PD++ 
Sbjct: 278 EGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVT 337

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N MI+  +  G + EA K+F+KMK  G  P     N+ +      G+ +E+ ++   M+
Sbjct: 338 YNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMT 397

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K  KP+  +Y  L+  + S+    +   +   M ++GI  D   +N L  AYA+ G  
Sbjct: 398 A-KGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMV 456

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A  +  EMQ   V P+  T   ++S + + G + DAM    +M    + PN  V++S+
Sbjct: 457 DDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSI 516

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GV-KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           I+GF       G+ KA  L+ E    G+ +PD+V F++++++    G +    +IFD + 
Sbjct: 517 IQGFC---MHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVT 573

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G  PD+  F+ L  GY   G+  KA  IL +M   GV  ++V ++T++ G+    ++ 
Sbjct: 574 DIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRIN 633

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
             ++++ +M   G+ PN  TY  +L G   A +   A +    M E G
Sbjct: 634 DGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESG 681



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/437 (23%), Positives = 208/437 (47%), Gaps = 2/437 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F  +   G  P ++   + +A+L +  R K    +   +   G KPD + +
Sbjct: 349 GRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSY 408

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +++  +  G   + + +F  MK +G       +N LI  Y   G  ++++ +   M Q
Sbjct: 409 CTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEM-Q 467

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + V P+  TY+ ++ A+     + +A     +MVA GIQP+   Y+++ + +  +G   
Sbjct: 468 QQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLV 527

Query: 188 RAEQMLFEMQNNQV-RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
           +A++++ EM N  + RP+      +++  CK+G + DA      + ++   P+++ F SL
Sbjct: 528 KAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSL 587

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G+  +   D   K L  ME  GV+ D+VT+ST++D +   G +     +F +M + G+
Sbjct: 588 IDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGV 647

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           +P+   + I+  G  RAG    A      M + G    V ++  ++ G C       A+ 
Sbjct: 648 KPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAII 707

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           +++K+  + +  ++    T++    + ++   A+EL   +   G+ P +ST  ++  +  
Sbjct: 708 LFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLL 767

Query: 427 AIGLAREAKRVLKSAEE 443
             G   +A  +  S E+
Sbjct: 768 KDGAVEDANNMFSSMEK 784



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/442 (22%), Positives = 194/442 (43%), Gaps = 15/442 (3%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSI--------LSLISKVEKDGMKPD 63
           +AH++F+ L  +       +    + AL R     +         L+L ++V ++   P 
Sbjct: 92  DAHHMFDELFRQATPVPGRSLNGFLTALARATSSSACITDGPALALALFNRVCREQAGPR 151

Query: 64  SI-----LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
            +      ++ +++ C  +   D  + +F  +  +G K    T +TL+K      + EE+
Sbjct: 152 VVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEA 211

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG--IQPDAVTYNTL 176
           + +L     +    PN  +Y+I+++  C  +  + A ++   M   G    P+ V YNT+
Sbjct: 212 VNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTV 271

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
              + + GET +A  +  EM    V+P+  T  +I+   CK   M+ A   L +M     
Sbjct: 272 IHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGA 331

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P+ V +N +I G+  +       K    M+  G+ P++V  ++ + +    G   +  E
Sbjct: 332 QPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAE 391

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           IFD M   G +PDI  +  L  GY   G       +  SM+  G+  +  +F  +I  + 
Sbjct: 392 IFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYA 451

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
               +  AM I+ +M + G++P++ TY T++  +    +   A E    M  +G++P  +
Sbjct: 452 KRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTA 511

Query: 417 TIQLVADSWRAIGLAREAKRVL 438
               +   +   G   +AK ++
Sbjct: 512 VYHSIIQGFCMHGGLVKAKELV 533



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/422 (21%), Positives = 184/422 (43%), Gaps = 76/422 (18%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  EA  IF+ +  +GH+P +++Y TL+     +  F  ++ L + ++ +G+  D
Sbjct: 380 LCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAAD 439

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGC---------------------------- 95
             +FN +I+A ++ G VD+AM IF +M+  G                             
Sbjct: 440 CRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFN 499

Query: 96  -------KPTTSTYNTLIKGYG----------------NVGKPEESL----KLLQLMSQD 128
                  +P T+ Y+++I+G+                 N G P   +     ++  + +D
Sbjct: 500 QMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKD 559

Query: 129 KNV---------------KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY 173
             V               +P+  T+  L+  +C    +++A+ ++  M   G++ D VTY
Sbjct: 560 GRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTY 619

Query: 174 NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
           +TL   Y + G       +  EMQ   V+PN  T GI+++G  + G    A +  + M E
Sbjct: 620 STLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIE 679

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG---VKPDVVTFSTIMDAWSSAGL 290
                 + ++  ++ G      ++  D+A+ L ++ G   VK  +   +T+++A      
Sbjct: 680 SGTTVTVSIYGIILGGLC---RNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQR 736

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
             + +E+F  +  +G+ P+   + ++    ++ G  + A ++ +SM K G+ P   +   
Sbjct: 737 KEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNR 796

Query: 351 VI 352
           +I
Sbjct: 797 II 798



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/252 (22%), Positives = 120/252 (47%), Gaps = 1/252 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  +AH IF+ + + G RP +IT+T+L+       +      ++  +E  G+
Sbjct: 553 INSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGV 612

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + D + ++ +++   ++G +++ + +F++M+  G KP T TY  ++ G    G+   + K
Sbjct: 613 ETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARK 672

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M +          Y I++   C  N  +EA  +  K+    ++      NT+  A 
Sbjct: 673 KFHEMIES-GTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAM 731

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A+++   +  + + PNE T G+++    K+G +EDA      M++  + P  
Sbjct: 732 YKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGS 791

Query: 241 VVFNSLIKGFLD 252
            + N +I+  L+
Sbjct: 792 RLLNRIIRMLLE 803



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 4/184 (2%)

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIF-DDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
           G+K   +T ST++     A    +   +    M + G  P++  +SI+ KG       Q+
Sbjct: 187 GLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQR 246

Query: 329 AESILTSMRKYG--VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           A  +   M K G    PNVV + TVI G+    +  +A S++ +M   G+ P++ TY  +
Sbjct: 247 ALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLI 306

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
           +    +A+   +AE +L+ M   G +P   T   +   +  +G  +EA ++ +  +  R 
Sbjct: 307 IDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKS-RG 365

Query: 447 SMPN 450
            +PN
Sbjct: 366 LIPN 369



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 49/114 (42%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +  EA  +F  +   G  P   TY  ++  L +    +   ++ S +EK G+ P S L N
Sbjct: 736 RKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLN 795

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
            +I    E G + +A     K+         ST + ++  +   GK  E +KLL
Sbjct: 796 RIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKLL 849


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 202/402 (50%), Gaps = 14/402 (3%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PTL+TYT LV  L +  + +    +  ++ + G KPD I ++++I+  S++G VDEA K+
Sbjct: 139 PTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKL 198

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
              M   G  PT   Y +++ G    G+ +E++K +Q M + +     D TY+ +V  + 
Sbjct: 199 VDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVD-TYSFIVTGYI 257

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               +EEA+ V+ +M      PD ++Y     A    G    AE++   M     +P+  
Sbjct: 258 GMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMH 317

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T GII+  +CKEG+M  A   L  M +  V PN  ++  ++ GF+    S  +++AL L 
Sbjct: 318 TYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVK---SSRLEEALELY 374

Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV--KAGIEPDIHVFSILAKGYV 321
           +     G+ P  VT++T+++A      M +  E+  +M   K  +EP I  +S++  G  
Sbjct: 375 QRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLG 434

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           + G  ++A  +L  M   GV P+   +T++I     A K+ RAM + E+M + GI P+  
Sbjct: 435 KVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDH 494

Query: 382 TYETL--LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           TY TL  +    +    W   +LLQ M   G  P + T + V
Sbjct: 495 TYGTLVQILCRSDVDAAW---DLLQEMMRNGHTPNEFTFKAV 533



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 116/453 (25%), Positives = 214/453 (47%), Gaps = 21/453 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEE----GHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
            NIL+      +   + N L+ E    G      T+  +++AL  ++     +S  +   
Sbjct: 32  FNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVSYFNSRT 91

Query: 57  KDGMK-------PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY 109
           ++  +       PDS+ + A+++   ++GN D  ++ ++KM  S C+PT  TY  L+ G 
Sbjct: 92  EEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGL 151

Query: 110 GNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
               K E +  + + M + K  KP+   Y+ L+        ++EA  +V  M+A G  P 
Sbjct: 152 CKAHKVERACDVFEEMIR-KGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPT 210

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
           AV Y ++     + G    A + + EM+  ++RP   T   IV+GY   G +E+A   + 
Sbjct: 211 AVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVME 270

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            M + +  P+ + +   I+    I   +  +K    M E G KPD+ T+  I+D +   G
Sbjct: 271 EMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEG 330

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
            M     +   M KA ++P+ ++++++  G+V++   ++A  +   + K G+ P+ V + 
Sbjct: 331 SMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYN 390

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIG--INPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           TVI+  C   KM  A+ +  +M      + P++ TY  ++ G G+     RA +LL  M 
Sbjct: 391 TVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMI 450

Query: 408 EKGVRPK----KSTIQLVADSW---RAIGLARE 433
           + GV P      S IQ +A +    RA+ L  E
Sbjct: 451 DNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEE 483



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/447 (22%), Positives = 217/447 (48%), Gaps = 19/447 (4%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV  G+  +A   F   I E   P + ++  L+     +  F+ + +L+ +++  G+  +
Sbjct: 7   LVRGGQLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFEVVNALLREMKARGITSN 63

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCK-------PTTSTYNTLIKGYGNVGKPE 116
                 +++A     ++D+A+  F    +  C+       P + TY  ++ G    G  +
Sbjct: 64  GATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYD 123

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
             L+  + M   K  +P   TY +LV   C  + +E A +V  +M+  G +PD + Y++L
Sbjct: 124 AGLEYYEKMVASK-CEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSL 182

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
               ++ G    A +++  M      P       IV+G CK G +++A++ +  M+   +
Sbjct: 183 IDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRL 242

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGK 293
            P +  ++ ++ G++ +     V++A  +MEE   +   PD ++++  ++A  S G   +
Sbjct: 243 RPRVDTYSFIVTGYIGMGK---VEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREE 299

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
            +++F+ MV+ G +PD+H + I+   + + G    A  +L  M K  V PN  ++T ++ 
Sbjct: 300 AEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMD 359

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG--V 411
           G+  + +++ A+ +Y+++ + GI P+  TY T++    + K+   A ELL+ M+ +   +
Sbjct: 360 GFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEEL 419

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVL 438
            P   T  ++      +G+   A  +L
Sbjct: 420 EPSIVTYSMIIHGLGKVGMEERAFDLL 446



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/385 (21%), Positives = 172/385 (44%), Gaps = 15/385 (3%)

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N+++ A    G + +A+  FQ    S  +P  S++N L++G+      E    LL+ M +
Sbjct: 1   NSLLLALVRGGQLSDALGFFQS---SISEPNVSSFNILLRGFAARDDFEVVNALLREM-K 56

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNV-------VYKMVASGIQPDAVTYNTLARAY 180
            + +  N  T+ +++ A C++  +++A +          ++  +   PD+VTY  +    
Sbjct: 57  ARGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGL 116

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G      +   +M  ++  P   T  ++V G CK   +E A      M      P++
Sbjct: 117 FKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDI 176

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + ++SLI G       D   K + LM   G  P  V +++I+      G + +  +   +
Sbjct: 177 IAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQE 236

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M +  + P +  +S +  GY+  G+ ++A +++  M      P+ + +T  I    +  +
Sbjct: 237 MRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGR 296

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
            + A  ++E M E G  P++ TY  ++  + +      A  +L++M++  V+P +    +
Sbjct: 297 REEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTM 356

Query: 421 VADSWRAIGLAREA----KRVLKSA 441
           + D +       EA    +R+LK  
Sbjct: 357 IMDGFVKSSRLEEALELYQRILKDG 381



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 4/108 (3%)

Query: 3   ILVGKGKPHEAHYIFNCL---IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG 59
           I+ G GK       F+ L   I+ G  P   TYT+L+  L    +    + L+ ++ K G
Sbjct: 429 IIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAG 488

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIK 107
           + PD   +  ++     S +VD A  + Q+M  +G  P   T+  + K
Sbjct: 489 IFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPNEFTFKAVEK 535


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 204/435 (46%), Gaps = 13/435 (2%)

Query: 8   GKPHEAHYIF-----NCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           G  H+A  +F     NCLI     P  ++Y T++  L + KR      L  +++    KP
Sbjct: 143 GDSHKAMDLFCMMKRNCLI-----PDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKP 197

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           +S+ F+A+I+   ++G+V+E   + ++M+  G +     Y+ LI G+ + G  E   +L 
Sbjct: 198 NSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELF 257

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             M + KNV PN  TY+ L+ A C K   +EA  ++  M    ++PD V Y  LA   ++
Sbjct: 258 NEMLR-KNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSK 316

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G    A ++L  M      PN  T   I++G CKEG ++DA+  L  M +    P++V 
Sbjct: 317 NGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVT 376

Query: 243 FNSLIKGFLDIKDSDGVDKALTLM--EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +++L+KG   +   D     L L+  +EF +KPDV  F+ ++        +   + ++  
Sbjct: 377 YSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYT 436

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ G   +I  ++IL  GY+ AG+  KA  +       G+ PN   +T +I+G C    
Sbjct: 437 MVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQM 496

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ K    G  P +  Y TL+          +A  L Q M      P   +  +
Sbjct: 497 LSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNI 556

Query: 421 VADSWRAIGLAREAK 435
           + D     G    AK
Sbjct: 557 IIDGTLKAGDVESAK 571



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 206/412 (50%), Gaps = 36/412 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L  K K  EA  + + +     RP ++ YT L   L++  R    + ++  + K G 
Sbjct: 276 MNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGE 335

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+++ +NA+IN   + G VD+A+ I + M   G KP   TY+TL+KG   VGK +E++ 
Sbjct: 336 EPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVD 395

Query: 121 LLQ-LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           LL  LMS++ ++KP+   +N++++  C +  +  A  V Y MV  G   + VTYN L   
Sbjct: 396 LLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDG 455

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           Y   G+  +A ++  +  ++ + PN  T  ++++G CK       M+ L           
Sbjct: 456 YLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCK-------MQML----------- 497

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
                S+ KG  + K +             G +P V  ++T+M +      + + + +F 
Sbjct: 498 -----SIAKGLFNKKRAS------------GTRPTVSEYNTLMASLCRESSVEQARNLFQ 540

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M  A  +PD+  F+I+  G ++AG+ + A+ +L  M    + P+ + F+ +I+ +    
Sbjct: 541 EMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLG 600

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           ++  A S+YE+M   G  P+   +++LL GY    +  +   +LQ M +K V
Sbjct: 601 QLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDV 652



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 186/393 (47%), Gaps = 3/393 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   + + L+ +    ++      ++  + K G   +   FN ++    +SG+  +AM +
Sbjct: 92  PCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDL 151

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F  MK +   P   +YNT+I G     +  E+ +L + M +    KPN  T++ L+  +C
Sbjct: 152 FCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEM-KGGECKPNSVTFSALIDGFC 210

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               +EE + ++ +M   G++ D   Y+ L   +   G+  R +++  EM    V PN  
Sbjct: 211 KNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVV 270

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   +++  CK+   ++A + L  M   +V P++V +  L  G      +    K L LM
Sbjct: 271 TYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLM 330

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            + G +P+ VT++ I++     G +     I + M K G +PD+  +S L KG    G+ 
Sbjct: 331 VKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKI 390

Query: 327 QKAESILTSM--RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
            +A  +L  +  +++ + P+V  F  VI   C   +++ A  +Y  M E G   N+ TY 
Sbjct: 391 DEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYN 450

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            L+ GY  A +  +A EL +   + G+ P  +T
Sbjct: 451 ILIDGYLSAGKLTKALELWKDAVDSGISPNAAT 483



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 179/372 (48%), Gaps = 3/372 (0%)

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I+   ++ + D  + +  KM      P  ++ + LI+ + N  KP  +  +L L+ +
Sbjct: 63  NTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMK 122

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            +    N   +N+L++ +C      +A ++   M  + + PD V+YNT+     +     
Sbjct: 123 -RGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLV 181

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A+++  EM+  + +PN  T   ++ G+CK G++E+    L  M+++ +  ++ V+++LI
Sbjct: 182 EAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALI 241

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            GF    D +   +    M    V P+VVT+S +M+A        +  ++ D M    + 
Sbjct: 242 SGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVR 301

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+  +++LA G  + G    A  +L  M K G  PN V +  +I+G C   ++  A+ I
Sbjct: 302 PDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGI 361

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM--EEKGVRPKKSTIQLVADSW 425
            E M + G  P++ TY TL+ G     +   A +LL ++  +E  ++P      LV    
Sbjct: 362 LETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQEL 421

Query: 426 RAIGLAREAKRV 437
                 R AKRV
Sbjct: 422 CKQRRLRHAKRV 433



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 140/320 (43%), Gaps = 6/320 (1%)

Query: 117 ESLKLLQLMSQD-KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
           ESL       QD  N  P+  + N L+         +   +V  KM +  + P   + + 
Sbjct: 40  ESLSHFHHTLQDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSA 99

Query: 176 LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
           L  ++    +   A  +L  +       N     +++ G+C+ G+   AM     MK   
Sbjct: 100 LIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNC 159

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           + P+ V +N++I G    K      +    M+    KP+ VTFS ++D +   G + +  
Sbjct: 160 LIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGF 219

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
            + ++M K G+E D+ V+S L  G+   G+ ++ + +   M +  V PNVV ++ +++  
Sbjct: 220 GLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNAL 279

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C   K + A  + + M    + P++  Y  L  G  +  +   A ++L +M ++G  P  
Sbjct: 280 CKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNN 339

Query: 416 STIQLVADSWRAIGLAREAK 435
            T   + +     GL +E +
Sbjct: 340 VTYNAIIN-----GLCKEGR 354



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 73/171 (42%)

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           P   + +T++D    A        +   M    + P     S L + +V   +P  A  +
Sbjct: 57  PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           L  + K G H NV  F  ++ G+C +    +AM ++  M    + P+  +Y T++ G  +
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            K+   A+EL + M+    +P   T   + D +   G   E   +L+  E+
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEK 227



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/117 (21%), Positives = 56/117 (47%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P  IT++ L+    +  +     SL  ++   G  PD++LF++++   S  G  ++ + +
Sbjct: 584 PDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSM 643

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            Q+M D      +   +T++    N+ K  +  K+L   SQ  +V  + +   +L++
Sbjct: 644 LQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKILPKFSQHTSVGASIKCNELLMK 700


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 193/384 (50%), Gaps = 1/384 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ +    +P  A      +++ G  P L+T+T+L+       R +  ++L  ++   G 
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP+ + +  +I    ++ +++ A+++F +M  +G +P   TYN L+ G   +G+  ++  
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M + + ++PN  T+  L+ A+     + EA  +   M+   + PD  TY +L    
Sbjct: 245 LLRDMMK-RRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
             YG    A QM + M+ N   PNE     ++ G+CK   +ED M+  Y M +  V  N 
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +  LI+G+  +   D   +    M      PD+ T++ ++D     G + K   IF+ 
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M K  ++ +I  ++I+ +G  + G+ + A  +  S+   G+ PNV+ +TT+ISG+C    
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483

Query: 361 MQRAMSIYEKMCEIGINPNLKTYE 384
           +  A S+++KM E G  PN   Y+
Sbjct: 484 IHEADSLFKKMKEDGFLPNESVYK 507



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 205/442 (46%), Gaps = 36/442 (8%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSL------------------- 51
           ++A  +F  ++     P++I +T L++ + +  R+  ++SL                   
Sbjct: 65  NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124

Query: 52  ----------------ISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGC 95
                           + K+ K G +PD + F +++N       +++A+ +F ++   G 
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184

Query: 96  KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
           KP   TY TLI+          +++L   M  + + +PN  TYN LV   C      +A 
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGS-RPNVVTYNALVTGLCEIGRWGDAA 243

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
            ++  M+   I+P+ +T+  L  A+ + G+   A+++   M    V P+  T G +++G 
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C  G +++A +  Y M+    +PN V++ +LI GF   K  +   K    M + GV  + 
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           +T++ ++  +   G     QE+F+ M      PDI  +++L  G    G+ +KA  I   
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           MRK  +  N+V +T +I G C   K++ A  ++  +   G+ PN+ TY T++ G+     
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483

Query: 396 PWRAEELLQVMEEKGVRPKKST 417
              A+ L + M+E G  P +S 
Sbjct: 484 IHEADSLFKKMKEDGFLPNESV 505



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/365 (21%), Positives = 155/365 (42%), Gaps = 36/365 (9%)

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           ++A+ +F +M  S   P+   +  L+     + + +  + L + M Q   + P   T NI
Sbjct: 65  NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM-QILGIPPLLCTCNI 123

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           ++   C  +    A   + KM+  G +PD VT+ +L                        
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSL------------------------ 159

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
                      ++GYC    +EDA+    ++  +   PN+V + +LI+     +  +   
Sbjct: 160 -----------LNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           +    M   G +P+VVT++ ++      G  G    +  DM+K  IEP++  F+ L   +
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
           V+ G+  +A+ +   M +  V+P+V  + ++I+G C    +  A  ++  M   G  PN 
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
             Y TL+ G+ ++K+     ++   M +KGV     T  ++   +  +G    A+ V   
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388

Query: 441 AEEDR 445
               R
Sbjct: 389 MSSRR 393



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 8/283 (2%)

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE- 195
           +Y  ++R         +A ++  +MV S   P  + +  L    A+    Y     LFE 
Sbjct: 50  SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNR-YDVVISLFEQ 108

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           MQ   + P   TC I++   C       A  FL +M +L   P+LV F SL+ G+     
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYC---H 165

Query: 256 SDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
            + ++ A+ L ++    G KP+VVT++T++        +    E+F+ M   G  P++  
Sbjct: 166 WNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVT 225

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++ L  G    G    A  +L  M K  + PNV+ FT +I  +    K+  A  +Y  M 
Sbjct: 226 YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           ++ + P++ TY +L+ G         A ++  +ME  G  P +
Sbjct: 286 QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 222/477 (46%), Gaps = 45/477 (9%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA  +   ++E+G  P   TYT LV    +QKR K    +   +   G+ P+
Sbjct: 286 LCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPN 345

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              + A+I+   + GN++EA++I  +M   G K    TYN +I G    G+  +++ L  
Sbjct: 346 RFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFN 405

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M     ++P+  TYN+L+  +   + + +A  ++ +M A  + P   TY+ L       
Sbjct: 406 EMLM-AGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHS 464

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +  +A ++L +M  N V+PN    G ++  Y +E   E A+  L  M    V P+L  +
Sbjct: 465 SDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCY 524

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N LI G    K  +     L  M E G+KP+  T+   ++ +S +G +   +  F DM+ 
Sbjct: 525 NCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLS 584

Query: 304 AGIEPDIHVFSILAKGY------------------------VRA-----------GEPQK 328
           +GI P+  +++IL KG+                        +RA           G+ ++
Sbjct: 585 SGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKE 644

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL- 387
           A  +     K GV P+V ++ ++ISG+C    +++A  +Y++M   GINPN+  Y TL+ 
Sbjct: 645 AMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLIN 704

Query: 388 -WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW-------RAIGLAREAKR 436
            +GY ++     A +L   M  KG+ P      ++ D         +A+ L  EA++
Sbjct: 705 DYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQ 761



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 227/449 (50%), Gaps = 5/449 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            + +G   EA  I + +I  G +  ++TY  ++  + +       +SL +++   G++PD
Sbjct: 356 FIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPD 415

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +  +N +I+   +S ++ +A ++  +MK     P+  TY+ LI G  +    +++ ++L 
Sbjct: 416 TWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLD 475

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M ++  VKPN   Y  L++A+  ++  E A  ++  M+A+G+ PD   YN L     + 
Sbjct: 476 QMIRN-GVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRA 534

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +   A+ +L +M    ++PN  T G  ++ Y K G ++ A R+   M    + PN V++
Sbjct: 535 KKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIY 594

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
             LIKG  D+ ++         M E G+ PD+  +S I+ + S  G   +   +F   +K
Sbjct: 595 TILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLK 654

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS--GWCNAVKM 361
            G+ PD+ +++ L  G+ + G+ +KA  +   M   G++PN+V++ T+I+  G+C +  +
Sbjct: 655 TGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNL 714

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             A  ++++M   GI+P+   Y  L+ G G+     +A  L    ++K V    +   L+
Sbjct: 715 TEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLI 774

Query: 422 ADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            DS+   G   EA+ +      D++  PN
Sbjct: 775 -DSFCKHGKVIEARELFDDM-VDKKLTPN 801



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 200/423 (47%), Gaps = 2/423 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           ++  ++E    P + TYT ++ A  +         ++S++EK+  KP+   +NA I    
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLC 287

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           ++G VDEA+++ + M + G  P   TY  L+ G+    + +E+  + + M     + PN 
Sbjct: 288 QTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPS-SGLNPNR 346

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY  L+  +  + +IEEA  +  +M+  G++ + VTYN +    A+ GE  +A  +  E
Sbjct: 347 FTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M    + P+  T  +++ GY K  +M  A   L  MK  ++ P+   ++ LI G     D
Sbjct: 407 MLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
               ++ L  M   GVKP+V  + T++ A+          E+   M+  G+ PD+  ++ 
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNC 526

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  G  RA + ++A+ +L  M + G+ PN   +   I+ +  + ++Q A   ++ M   G
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           I PN   Y  L+ G+ +      A    + M EKG+ P       +  S    G  +EA 
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646

Query: 436 RVL 438
            V 
Sbjct: 647 GVF 649



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 195/436 (44%), Gaps = 2/436 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G  +EA  +F   I EG  PTLI    L+  L +         +   + +  + PD   +
Sbjct: 186 GFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTY 245

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I A  + G+V +   +  +M+   CKP   TYN  I G    G  +E+L++ +LM  
Sbjct: 246 TNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLM-M 303

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +K + P+  TY +LV  +C +   +EA  +   M +SG+ P+  TY  L   + + G   
Sbjct: 304 EKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIE 363

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++  EM    ++ N  T   ++ G  K G M  AM     M    + P+   +N LI
Sbjct: 364 EALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLI 423

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G+L   D     + L  M+   + P   T+S ++     +  + K  E+ D M++ G++
Sbjct: 424 DGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVK 483

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P++ ++  L K YV+    + A  +L  M   GV P++  +  +I G C A K++ A  +
Sbjct: 484 PNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKML 543

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
              M E GI PN  TY   +  Y ++ +   AE   + M   G+ P      ++      
Sbjct: 544 LVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCD 603

Query: 428 IGLAREAKRVLKSAEE 443
           +G   EA    K   E
Sbjct: 604 VGNTVEALSTFKCMLE 619



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 204/434 (47%), Gaps = 6/434 (1%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
            +A+ + + +I  G +P +  Y TL+ A  ++ R++  + L+  +  +G+ PD   +N +
Sbjct: 468 QKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCL 527

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           I     +  V+EA  +   M + G KP   TY   I  Y   G+ + + +  + M     
Sbjct: 528 IIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDM-LSSG 586

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           + PN+  Y IL++  C   +  EA +    M+  G+ PD   Y+ +  + ++ G+T  A 
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            +  +     V P+      ++SG+CKEG++E A +    M    ++PN+VV+N+LI  +
Sbjct: 647 GVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDY 706

Query: 251 LDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
              K S  + +A  L +E    G+ PD   +  ++D     G + K   +F +  +  + 
Sbjct: 707 GYCK-SGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV- 764

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
             +  F+ L   + + G+  +A  +   M    + PN+V +T +I  +  A  M+ A  +
Sbjct: 765 GSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQL 824

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           +  M    I PN  TY +LL  Y +    ++   L + ME +G+        ++A ++  
Sbjct: 825 FLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCK 884

Query: 428 IGLAREAKRVLKSA 441
            G + EA ++L  +
Sbjct: 885 EGKSLEALKLLNKS 898



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 205/467 (43%), Gaps = 53/467 (11%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +   +I  G  P L  Y  L+  L R K+ +    L+  + + G+KP++  + A IN  S
Sbjct: 508 LLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYS 567

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           +SG +  A + F+ M  SG  P    Y  LIKG+ +VG   E+L   + M + K + P+ 
Sbjct: 568 KSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLE-KGLIPDI 626

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           R Y+ ++ +       +EA  V  K + +G+ PD   YN+L   + + G+  +A Q+  E
Sbjct: 627 RAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDE 686

Query: 196 MQNNQVRPNERTCGIIVS--GYCKEGNMEDAMRFLYRMKELEVHPN-------------- 239
           M +N + PN      +++  GYCK GN+ +A +    M    + P+              
Sbjct: 687 MLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKE 746

Query: 240 --------------------LVVFNSLIKGF------LDIKD--SDGVDKALTLMEEFGV 271
                               L  FNSLI  F      ++ ++   D VDK LT       
Sbjct: 747 GNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLT------- 799

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            P++VT++ ++DA+  A +M + +++F DM    I P+   ++ L   Y + G   K  S
Sbjct: 800 -PNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMIS 858

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +   M   G+  + + +  + S +C   K   A+ +  K    GI      ++ L++   
Sbjct: 859 LFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLC 918

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           + KQ     ELL  M ++ +     T   +   +   G   EA +VL
Sbjct: 919 KEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVL 965



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/415 (24%), Positives = 189/415 (45%), Gaps = 4/415 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+    G+   A   F  ++  G  P  + YT L+            LS    + + G+
Sbjct: 563 INLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGL 622

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   ++A+I++ S++G   EAM +F K   +G  P    YN+LI G+   G  E++ +
Sbjct: 623 IPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQ 682

Query: 121 LLQLMSQDKNVKPNDRTYNILVR--AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           L   M  +  + PN   YN L+    +C   ++ EA+ +  +M++ GI PD   Y  L  
Sbjct: 683 LYDEMLHN-GINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILID 741

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
              + G   +A  +  E Q   V        +I S +CK G + +A      M + ++ P
Sbjct: 742 GCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDS-FCKHGKVIEARELFDDMVDKKLTP 800

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           N+V +  LI  +   +  +  ++    ME   + P+ +T+++++ +++  G   K   +F
Sbjct: 801 NIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLF 860

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
            DM   GI  D   + ++A  Y + G+  +A  +L      G+     +F  +I   C  
Sbjct: 861 KDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKE 920

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            ++   + +  +M +  ++ + KT  TLL G+ ++     A ++L VM+  G  P
Sbjct: 921 KQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVP 975



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 125/283 (44%), Gaps = 38/283 (13%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA  +F+ +I +G  P    Y  L+    ++   +  LSL  + ++  +   S  F
Sbjct: 712 GNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSA-F 770

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N++I++  + G V EA ++F  M D    P   TY  LI  YG     EE+ +L   M +
Sbjct: 771 NSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDM-E 829

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            +N+ PN  TY  L+ ++    +  +  ++   M A GI  DA+ Y  +A AY + G++ 
Sbjct: 830 TRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSL 889

Query: 188 RAE-----------------------------------QMLFEMQNNQVRPNERTCGIIV 212
            A                                    ++L EM   ++  + +TC  ++
Sbjct: 890 EALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLL 949

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHP-NLVVFNSLIKGFLDIK 254
            G+ K GN ++A + L  M+ L   P +L + +S+  G  D+K
Sbjct: 950 LGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSISTGRDDMK 992



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 8/185 (4%)

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
           +D  +    EFG   ++  F   +D +   G + +   +F   +  G  P +   + L +
Sbjct: 157 LDSLVRCYREFG-GSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMR 215

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC---NAVKMQRAMSIYEKMCEIG 375
             ++A        +  SM +  + P+V  +T VI   C   + +K +  +S  EK C+  
Sbjct: 216 DLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECK-- 273

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
             PNL TY   + G  +      A E+ ++M EKG+ P   T  L+ D +     ++EAK
Sbjct: 274 --PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAK 331

Query: 436 RVLKS 440
            + +S
Sbjct: 332 LIFES 336



 Score = 42.4 bits (98), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 49/93 (52%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  EA  + N  + EG +     +  L+  L ++K+  ++L L+S++ K+ +   S  
Sbjct: 885 EGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKT 944

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTT 99
            N ++    +SGN DEA K+   M+  G  PT+
Sbjct: 945 CNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTS 977


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/478 (24%), Positives = 231/478 (48%), Gaps = 6/478 (1%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           ++  +G   +A  +F+ +I  G  P    Y +L+    R+K  +    L+ +++K  +  
Sbjct: 356 VMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
               +  ++     SG++D A  I ++M  SGC+P    Y TLIK +    +  +++++L
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           + M +++ + P+   YN L+        ++EA + + +MV +G++P+A TY      Y +
Sbjct: 476 KEM-KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
             E   A++ + EM+   V PN+  C  +++ YCK+  + +A      M +  +  +   
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKT 594

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +  L+ G       D  ++    M   G+ PDV ++  +++ +S  G M K   IFD+MV
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           + G+ P++ ++++L  G+ R+GE +KA+ +L  M   G+HPN V + T+I G+C +  + 
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A  ++++M   G+ P+   Y TL+ G        RA  +     +KG     +    + 
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPFNALI 773

Query: 423 DSWRAIG---LAREAKRVLKSAEEDRQSMPNKKD-EIAVESIHRKQNLSASNSTFLQI 476
           +     G   L  E    L     DR   PN     I ++ + ++ NL A+   F Q+
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 187/388 (48%), Gaps = 5/388 (1%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+ P    ++ +I+   +   +++A  +  +M   G      TY+ LI G    G+  ++
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK-GRNADA 330

Query: 119 LKLL--QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
            K L  +++S   N+KP    Y+  +     +  +E+A  +   M+ASG+ P A  Y +L
Sbjct: 331 AKGLVHEMVSHGINIKP--YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
              Y +     +  ++L EM+   +  +  T G +V G C  G+++ A   +  M     
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            PN+V++ +LIK FL         + L  M+E G+ PD+  +++++   S A  M + + 
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
              +MV+ G++P+   +     GY+ A E   A+  +  MR+ GV PN V+ T +I+ +C
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
              K+  A S Y  M + GI  + KTY  L+ G  +  +   AEE+ + M  KG+ P   
Sbjct: 569 KKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEED 444
           +  ++ + +  +G  ++A  +     E+
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEE 656



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/474 (21%), Positives = 211/474 (44%), Gaps = 56/474 (11%)

Query: 2   NILVGKGKP---HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           ++++G  K     EA      ++E G +P   TY   ++       F S    + ++ + 
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+ P+ +L   +IN   +   V EA   ++ M D G      TY  L+ G     K +++
Sbjct: 552 GVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
            ++ + M + K + P+  +Y +L+  +    ++++A ++  +MV  G+ P+ + YN L  
Sbjct: 612 EEIFREM-RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            + + GE  +A+++L EM    + PN  T   I+ GYCK G++ +A R    MK   + P
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLM-------------------------------- 266
           +  V+ +L+ G   + D   V++A+T+                                 
Sbjct: 731 DSFVYTTLVDGCCRLND---VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTE 787

Query: 267 ----------EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
                     + FG KP+ VT++ ++D     G +   +E+F  M  A + P +  ++ L
Sbjct: 788 VLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM----- 371
             GY + G   +   +       G+ P+ +M++ +I+ +       +A+ + ++M     
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST-IQLVADS 424
            + G   ++ T   LL G+ +  +   AE++++ M      P  +T I+L+ +S
Sbjct: 907 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINES 960



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 167/371 (45%), Gaps = 23/371 (6%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L    K  +A  IF  +  +G  P + +Y  L+   ++    +   S+  ++ ++G+
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I++N ++     SG +++A ++  +M   G  P   TY T+I GY   G   E+ +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M   K + P+   Y  LV   C  N +E A   ++     G       +N L    
Sbjct: 719 LFDEMKL-KGLVPDSFVYTTLVDGCCRLNDVERAIT-IFGTNKKGCASSTAPFNALINWV 776

Query: 181 AQYGETYRAEQMLFEMQNNQV----RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
            ++G+T    ++L  + +       +PN+ T  I++   CKEGN+E A    ++M+   +
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF------GVKPDVVTFSTIMDAWSSAGL 290
            P ++ + SL+ G+      D + +   +   F      G++PD + +S I++A+   G+
Sbjct: 837 MPTVITYTSLLNGY------DKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890

Query: 291 MGKCQEIFDDM-----VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
             K   + D M     V  G +  I     L  G+ + GE + AE ++ +M +    P+ 
Sbjct: 891 TTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDS 950

Query: 346 VMFTTVISGWC 356
                +I+  C
Sbjct: 951 ATVIELINESC 961



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 104/437 (23%), Positives = 185/437 (42%), Gaps = 67/437 (15%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           + KG   EA ++F+  +     P L     L+ AL R  R    L L   V K GM   +
Sbjct: 162 IAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNR----LDLFWDVYK-GMVERN 216

Query: 65  ILFNA-----MINACSESGNV---------------------DEAMKIFQKMKDSGCKPT 98
           ++F+      +I A   +GNV                     D A+K+ + M   G  P 
Sbjct: 217 VVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPL 276

Query: 99  TSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVV 158
             TY+ LI G   + + E++  LL  M     V  ++ TY++L+       + + A  +V
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDS-LGVSLDNHTYSLLIDGLLKGRNADAAKGLV 335

Query: 159 YKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
           ++MV+ GI      Y+      ++ G   +A+ +   M  + + P  +    ++ GYC+E
Sbjct: 336 HEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCRE 395

Query: 219 GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTF 278
            N+      L  MK+     N+V+                              P   T+
Sbjct: 396 KNVRQGYELLVEMKK----RNIVI-----------------------------SP--YTY 420

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
            T++    S+G +     I  +M+ +G  P++ +++ L K +++      A  +L  M++
Sbjct: 421 GTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKE 480

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            G+ P++  + ++I G   A +M  A S   +M E G+ PN  TY   + GY EA +   
Sbjct: 481 QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS 540

Query: 399 AEELLQVMEEKGVRPKK 415
           A++ ++ M E GV P K
Sbjct: 541 ADKYVKEMRECGVLPNK 557



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 7/160 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G    A  +F+ +      PT+ITYT+L+    +  R   +  +  +    G+
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGI 871

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKM-----KDSGCKPTTSTYNTLIKGYGNVGKP 115
           +PD I+++ +INA  + G   +A+ +  +M      D GCK + ST   L+ G+  VG+ 
Sbjct: 872 EPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEM 931

Query: 116 EESLKLLQLMSQDKNVKPNDRTYNILVRAWC-SKNSIEEA 154
           E + K+++ M + + + P+  T   L+   C S N   EA
Sbjct: 932 EVAEKVMENMVRLQYI-PDSATVIELINESCISSNQRVEA 970



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 65/313 (20%), Positives = 119/313 (38%), Gaps = 67/313 (21%)

Query: 112 VGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAV 171
           V  P + L     +   K  +    +++ L    C+  S E+A +VV +M+     P A 
Sbjct: 74  VDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERN-WPVAE 132

Query: 172 TYNTLARAYAQY-GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
            ++++ R   ++ G++   + +LF              GI+  GY  +G +E+A+     
Sbjct: 133 VWSSIVRCSQEFVGKS--DDGVLF--------------GILFDGYIAKGYIEEAVFVFSS 176

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
              LE+ P L     L+   L                                 W+   L
Sbjct: 177 SMGLELVPRLSRCKVLLDALL--------------------------------RWNRLDL 204

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
                +++  MV+  +  D+  + +L   + RAG  Q  + +L    K         F T
Sbjct: 205 F---WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE--------FRT 253

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
                  A+K++ +M     +C+ G+ P   TY+ L+ G  + K+   A+ LL  M+  G
Sbjct: 254 ATLNVDGALKLKESM-----ICK-GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG 307

Query: 411 VRPKKSTIQLVAD 423
           V     T  L+ D
Sbjct: 308 VSLDNHTYSLLID 320



 Score = 39.7 bits (91), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 59/292 (20%), Positives = 115/292 (39%), Gaps = 37/292 (12%)

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
           LD+ +    +KAL+++E       +     + + WSS   + +C + F      G   D 
Sbjct: 105 LDLCNFGSFEKALSVVERM-----IERNWPVAEVWSS---IVRCSQEF-----VGKSDDG 151

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
            +F IL  GY+  G  ++A  + +S     + P +     ++       ++     +Y+ 
Sbjct: 152 VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211

Query: 371 MCEIGINPNLKTYETLLWGYGEA-------------KQPWR--------AEELLQVMEEK 409
           M E  +  ++KTY  L+  +  A             ++ +R        A +L + M  K
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSAS 469
           G+ P K T  ++ D    I    +AK +L   +    S+ N    + ++ + + +N  A+
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331

Query: 470 NSTFLQIPGVVSSEHNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQP 521
                 +  +VS   N           V+  + V    K+LF     SG+ P
Sbjct: 332 KGL---VHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/482 (25%), Positives = 217/482 (45%), Gaps = 42/482 (8%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G  K   A  + +C++  G      +   L+  L R +  K +  L++++EK  ++P 
Sbjct: 256 LCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPS 315

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSG------CKPTTSTYNTLIKGYGNVGKPEE 117
            + F  ++N   ++  +DEA+++F +++  G       +P    +NTLI G   VGK E+
Sbjct: 316 VVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEED 375

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
            L LL+ M      +PN  TYN L+  +    + + A  +  +M   G+QP+ +T NTL 
Sbjct: 376 GLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLV 435

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERT--------CGI------------------- 210
               ++G  +RA +   EM+   ++ N  T        CG+                   
Sbjct: 436 DGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCS 495

Query: 211 --------IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
                   ++SG C  G M DA   + ++K      +   +N LI GF   K  + V + 
Sbjct: 496 PDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYEL 555

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           LT MEE GVKPD +T++T++      G      ++ + M+K G+ P +  +  +   Y  
Sbjct: 556 LTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCS 615

Query: 323 AGEPQKAESILTSM-RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
                +   I   M     V PN V++  +I   C    + RA+S+ E M    + PN  
Sbjct: 616 KKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTT 675

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY  +L G  + K   +A EL+  M E+  RP   T++++ +   A+G   + K  ++  
Sbjct: 676 TYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFVEGY 735

Query: 442 EE 443
           ++
Sbjct: 736 QD 737



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/436 (23%), Positives = 195/436 (44%), Gaps = 61/436 (13%)

Query: 33  TTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM-- 90
           + L+  L   +     L L ++++     P   L + ++    +SG   +A+ +  +M  
Sbjct: 145 SLLLQCLENARLVNDSLLLFNQLDPSSKSPQ--LCHGLLRVLLKSGRAGDALHVLDEMPQ 202

Query: 91  KDSGCKPTTS-TYNTLIKGYGNVGKPEESLKLLQLMSQ--DKNVKPNDRTYNILVRAWCS 147
            +SG   T    +  L++     G+     +++ L+++  ++ V P+      LV   C 
Sbjct: 203 ANSGFSVTGEIVFGELVRS----GRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCG 258

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
                 AW V++ ++  G   DA + N L     +  +  R  ++L EM+  ++RP+  T
Sbjct: 259 DQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVT 318

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKE------LEVHPNLVVFNSLIKGFLDI-KDSDGVD 260
            GI+V+  CK   +++A++   R++       + V P++V+FN+LI G   + K+ DG  
Sbjct: 319 FGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDG-- 376

Query: 261 KALTLMEEFGV----KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
             L+L+EE  +    +P+ VT++ ++D +  AG   +  E+F  M + G++P++   + L
Sbjct: 377 --LSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTL 434

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G  + G   +A      M+  G+  N   +T +IS +C    + RAM  +E+M   G 
Sbjct: 435 VDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGC 494

Query: 377 NPNL-----------------------------------KTYETLLWGYGEAKQPWRAEE 401
           +P+                                      Y  L+ G+ + K+  R  E
Sbjct: 495 SPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYE 554

Query: 402 LLQVMEEKGVRPKKST 417
           LL  MEE GV+P   T
Sbjct: 555 LLTEMEETGVKPDTIT 570



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 96/187 (51%), Gaps = 2/187 (1%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E G +P  ITY TL++ L +   F +   ++ K+ K+G++P  + + A+I+A     NVD
Sbjct: 561 ETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVD 620

Query: 82  EAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           E MKIF +M   S   P T  YN LI         + ++ L++ M + K V+PN  TYN 
Sbjct: 621 EGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDM-KVKRVRPNTTTYNA 679

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           +++    K  + +A+ ++ +MV    +PD +T   L    +  GE  + +  +   Q++ 
Sbjct: 680 ILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFVEGYQDSS 739

Query: 201 VRPNERT 207
              + +T
Sbjct: 740 YPASSQT 746


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 209/455 (45%), Gaps = 41/455 (9%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++   H P   T T +V +L    R      L+ ++   GM  ++I ++A+++   +   
Sbjct: 65  MVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCER 124

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +DEA+ + + M + GC PT  TYN++I G+    + +E+   ++ M  +    P+  TY 
Sbjct: 125 LDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAE-GCHPDIITYT 183

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+  +C    +     ++ ++   G  PD VTY+T+     + G    A  +  EM   
Sbjct: 184 ALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS-- 241

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P   T   ++ GYC+ G+M++A+R L +M + +  P++V + +L+  F  +   D  
Sbjct: 242 -CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDA 300

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            +    M    + PDVVTF++++D     G M    E+ +++ + G  P I+ ++ +  G
Sbjct: 301 YELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDG 360

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS------------- 366
           Y +A + +KAE ++   R  G  PN V +  +++G C A +  +A+              
Sbjct: 361 YCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCP 420

Query: 367 ------------------------IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
                                    YE+M + G  P   T+ T+++   +A QP +A EL
Sbjct: 421 TSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHEL 480

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           L+ M + G  P   T   V  ++   G+ ++A  +
Sbjct: 481 LEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 515



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 192/402 (47%), Gaps = 5/402 (1%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
           + + H P  +TYT LV  L++ +R +  + ++ ++      PD+     ++ +      V
Sbjct: 31  MNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRV 90

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           D+A ++ ++M   G      TY+ L+ G     + +E++ L++ M++ +   P   TYN 
Sbjct: 91  DDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAE-RGCAPTVVTYNS 149

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           ++  +C    ++EA   + +MVA G  PD +TY  L   + +  +  R  ++L E+    
Sbjct: 150 IITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRG 209

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
             P+  T   ++ G CK G + DA+      +E+   P  + +NSLI G+    D D   
Sbjct: 210 FTPDIVTYSTVIDGLCKAGRLRDAVDIF---EEMSCAPTAITYNSLIGGYCRAGDMDEAI 266

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           + L  M +    PDVVT++T+M A+   G +    E+F  MV   + PD+  F+ L  G 
Sbjct: 267 RLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGL 326

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
              G  + A  +L  + + G  P +  +  V+ G+C A ++++A  +       G  PN 
Sbjct: 327 CGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNT 386

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            TY  L+ G   A +  +A + L  +  +G  P  +++ + A
Sbjct: 387 VTYNILVAGCCRAGRTDQALQYLDQLNSEG-GPCPTSVAMYA 427



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 173/355 (48%), Gaps = 6/355 (1%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EAH     ++ EG  P +ITYT L+    + +     L L+ +V + G  PD + ++ +I
Sbjct: 162 EAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVI 221

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   ++G + +A+ IF++M    C PT  TYN+LI GY   G  +E+++LL  M  DK  
Sbjct: 222 DGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDK-C 277

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  TY  L+ A+C    +++A+ +  +MVA+ + PD VT+ +L       G    A +
Sbjct: 278 APDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALE 337

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L E+      P   T   +V GYCK   +  A   +   +     PN V +N L+ G  
Sbjct: 338 LLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCC 397

Query: 252 DIKDSDGVDKALT-LMEEFGVKP-DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
               +D   + L  L  E G  P  V  ++ I+DA    G      + +++M++ G  P 
Sbjct: 398 RAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPA 457

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
              F+ +     +A +PQ+A  +L  M KYG  P       V+S +C A  +Q+A
Sbjct: 458 AATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 512



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 183/396 (46%), Gaps = 12/396 (3%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +   + E G  PT++TY +++    R +R       + ++  +G  PD I + A+I
Sbjct: 127 EAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALI 186

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
               +S +V   +++  ++   G  P   TY+T+I G    G+  +++ + + MS     
Sbjct: 187 GGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS----C 242

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P   TYN L+  +C    ++EA  ++ KMV     PD VTY TL  A+ + G    A +
Sbjct: 243 APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYE 302

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  +M  N++ P+  T   +V G C EG MEDA+  L  +      P +  +N ++ G+ 
Sbjct: 303 LFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYC 362

Query: 252 DIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG--I 306
               ++ V KA  L+ +F   G  P+ VT++ ++     AG   +  +  D +   G   
Sbjct: 363 K---ANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPC 419

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
              + +++I+     R G    A      M + G  P    F TV+   C A + Q+A  
Sbjct: 420 PTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHE 479

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           + E+M + G  P   T + ++  Y  A    +A+EL
Sbjct: 480 LLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 515



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 200/394 (50%), Gaps = 12/394 (3%)

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           M P ++L N +I     +G +  A+ ++++M D+   P   TY  L+ G     +  +++
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAV 59

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           ++LQ M   ++V P++ T  ++V++ C  + +++A  +V +M+  G+  +A+TY+ L   
Sbjct: 60  QVLQEMVSARHV-PDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDG 118

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             +      A  ++  M      P   T   I++G+C+   +++A  F+ +M     HP+
Sbjct: 119 LCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPD 178

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           ++ + +LI GF   +D   V + L L+ E    G  PD+VT+ST++D    AG +    +
Sbjct: 179 IITYTALIGGFCKSRD---VGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVD 235

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           IF++M  A   P    ++ L  GY RAG+  +A  +L  M      P+VV +TT++S +C
Sbjct: 236 IFEEMSCA---PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFC 292

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
              ++  A  ++++M    ++P++ T+ +L+ G     +   A ELL+ +  +G  P   
Sbjct: 293 KMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIY 352

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           T   V D +      R+A+ ++      R  +PN
Sbjct: 353 TYNCVVDGYCKANQVRKAEELVADFRS-RGFVPN 385



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 109/225 (48%), Gaps = 1/225 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+     G+  +A+ +F  ++     P ++T+T+LV  L  + R +  L L+ ++ + G 
Sbjct: 288 MSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGC 347

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P    +N +++   ++  V +A ++    +  G  P T TYN L+ G    G+ +++L+
Sbjct: 348 PPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQ 407

Query: 121 LL-QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            L QL S+      +   Y I++ A C     ++A     +M+  G  P A T+ T+  A
Sbjct: 408 YLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFA 467

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
             +  +  +A ++L EM      P   TC  +VS YC+ G ++ A
Sbjct: 468 LCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 512


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 221/444 (49%), Gaps = 7/444 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGH---RPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           +  L  +G    A  +   +  E H   RP  ++YT L+ AL   +     + L+  +  
Sbjct: 84  LTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRS 143

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G++ D + +  +I    ++  VD+A+++  +M +SG +P    Y++L++GY   G+ E+
Sbjct: 144 AGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWED 203

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
             K+   MS+ K ++P+   Y  L+ + C     ++A  V+  MV  G++P+ VTYN L 
Sbjct: 204 VGKVFVEMSE-KGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLI 262

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-- 235
               + G    A  +L +M    V P+  T   ++ G      M++AM  L  M   +  
Sbjct: 263 NCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNI 322

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           V PN+V FNS+I+G  DI       +   +MEE G   ++VT++ ++        + K  
Sbjct: 323 VKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAM 382

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           E+ D+M   G+EPD   +SIL KG+ +  +  +AE +L++MR  G+ P +  +  ++   
Sbjct: 383 ELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAM 442

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C    M+RA +++ +M +     ++  Y T++ G  +A     A+ELL+ + ++G+ P  
Sbjct: 443 CEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDA 501

Query: 416 STIQLVADSWRAIGLAREAKRVLK 439
            T  +V + +   G    A  VLK
Sbjct: 502 VTYSIVINMFAKSGDMEAANGVLK 525



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 231/482 (47%), Gaps = 53/482 (10%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G R  ++TY TL+  L         + L+ ++ + G++P+ +++++++    +SG  ++ 
Sbjct: 145 GVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDV 204

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            K+F +M + G +P    Y  LI     VGK +++  ++ +M + + ++PN  TYN+L+ 
Sbjct: 205 GKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVR-RGLEPNVVTYNVLIN 263

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM--QNNQV 201
             C + S++EA  V+ KM   G+ PD VTYNTL +  +   E   A  +L EM    N V
Sbjct: 264 CMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIV 323

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           +PN  T   ++ G C  G M  A +    M+E     NLV +N LI G L +     V K
Sbjct: 324 KPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHK---VRK 380

Query: 262 ALTLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP---------- 308
           A+ LM+E    G++PD  T+S ++  +     + + +++   M   GIEP          
Sbjct: 381 AMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLV 440

Query: 309 ------------------------DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
                                   D+  +S +  G  +AG+ + A+ +L S+   G+ P+
Sbjct: 441 AMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPD 500

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
            V ++ VI+ +  +  M+ A  + ++M   G  P++  +++L+ GY    +  +  EL++
Sbjct: 501 AVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIR 560

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQ 464
            M  K +      I  ++ S  A   + E K +L       QS+P+   EI+  +I+  Q
Sbjct: 561 EMITKNIALDSKIISTLSTSLVA---SNEGKALL-------QSLPDFSAEISKGNINSPQ 610

Query: 465 NL 466
            L
Sbjct: 611 EL 612



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 195/382 (51%), Gaps = 6/382 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +   +F  + E+G  P ++ YT L+ +L +  + K    ++  + + G++P+ + +
Sbjct: 199 GRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTY 258

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +IN   + G+V EA+ + +KM + G  P   TYNTLIKG  +V + +E++ LL+ M +
Sbjct: 259 NVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVR 318

Query: 128 DKN-VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            KN VKPN  T+N +++  C    + +A+ V   M  +G   + VTYN L     +  + 
Sbjct: 319 GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKV 378

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A +++ EM +  + P+  T  I++ G+CK   ++ A   L  M++  + P L  +  L
Sbjct: 379 RKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPL 438

Query: 247 IKGFLDIKDSDGVDKALTLMEEF--GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +    +      +++A  L  E       DVV +ST++     AG +   +E+   +V  
Sbjct: 439 LVAMCE---QGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDE 495

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+ PD   +SI+   + ++G+ + A  +L  M   G  P+V +F ++I G+    ++ + 
Sbjct: 496 GLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKV 555

Query: 365 MSIYEKMCEIGINPNLKTYETL 386
           + +  +M    I  + K   TL
Sbjct: 556 LELIREMITKNIALDSKIISTL 577



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 161/325 (49%), Gaps = 4/325 (1%)

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKN--VKPNDRTYNILVRAWCSKNSIEEAWNVV 158
           +YNT++      G  + +  LL+ MS + +   +PN  +Y +L+RA C+    ++A  ++
Sbjct: 79  SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLL 138

Query: 159 YKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
             M ++G++ D VTY TL R      E  +A +++ EM  + + PN      ++ GYCK 
Sbjct: 139 RSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKS 198

Query: 219 GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTF 278
           G  ED  +    M E  + P++V++  LI     +  +      + +M   G++P+VVT+
Sbjct: 199 GRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTY 258

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM-- 336
           + +++     G + +   +   M + G+ PD+  ++ L KG     E  +A  +L  M  
Sbjct: 259 NVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVR 318

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
            K  V PNVV F +VI G C+  +M++A  +   M E G   NL TY  L+ G     + 
Sbjct: 319 GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKV 378

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLV 421
            +A EL+  M   G+ P   T  ++
Sbjct: 379 RKAMELMDEMTSLGLEPDSFTYSIL 403



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 155/307 (50%), Gaps = 5/307 (1%)

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVAS---GIQPDAVTYNTLARAYAQYGETYRAEQML 193
           +YN ++ A C +   + A  ++  M        +P+AV+Y  L RA        +A  +L
Sbjct: 79  SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLL 138

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
             M++  VR +  T G ++ G C    ++ A+  +  M E  + PN+VV++SL++G+   
Sbjct: 139 RSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKS 198

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
              + V K    M E G++PDVV ++ ++D+    G   K   + D MV+ G+EP++  +
Sbjct: 199 GRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTY 258

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           ++L     + G  ++A  +L  M + GV P+VV + T+I G  + ++M  AM + E+M  
Sbjct: 259 NVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVR 318

Query: 374 IG--INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
               + PN+ T+ +++ G  +  +  +A ++  +MEE G      T  L+      +   
Sbjct: 319 GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKV 378

Query: 432 REAKRVL 438
           R+A  ++
Sbjct: 379 RKAMELM 385



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 146/285 (51%), Gaps = 15/285 (5%)

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQ---NNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           DAV+YNT+  A  + G   RA  +L  M    +   RPN  +  +++   C +   + A+
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIM 282
             L  M+   V  ++V + +LI+G  D  +   VDKA+ LM E    G++P+VV +S+++
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAE---VDKAVELMGEMCESGIEPNVVVYSSLL 192

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
             +  +G      ++F +M + GIEPD+ +++ L     + G+ +KA  ++  M + G+ 
Sbjct: 193 QGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLE 252

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA----KQPWR 398
           PNVV +  +I+  C    ++ A+ + +KM E G+ P++ TY TL+ G  +     +  W 
Sbjct: 253 PNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWL 312

Query: 399 AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            EE+  V  +  V+P   T   V      IG  R+A +V    EE
Sbjct: 313 LEEM--VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEE 355


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 198/403 (49%), Gaps = 2/403 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           I   +++ G+ P+++T  +L+       R    ++L+ ++ + G +PD++ F  +++   
Sbjct: 132 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 191

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           +     EA+ + ++M   GC+P   TY  +I G    G+P+ +L LL  M + K ++ + 
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK-IEADV 250

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
             YN ++   C    +++A+++  KM   GI+PD  TYN L      YG    A ++L +
Sbjct: 251 VIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSD 310

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM-KELEVHPNLVVFNSLIKGFLDIK 254
           M    + P+      ++  + KEG + +A +    M K     P++V +N+LIKGF   K
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
             +   +    M + G+  + VT++T++  +  A      Q +F  MV  G+ PDI  ++
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
           IL  G    G  + A  +   M+K  +  ++V +TT+I   C A K++    ++  +   
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           G+ PN+ TY T++ G+        A+ L   M+E G  P   T
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 203/413 (49%), Gaps = 2/413 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  + + ++E G++P  +T+TTLV  L +  +    ++L+ ++   G +PD + + A+I
Sbjct: 163 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 222

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N   + G  D A+ +  KM+    +     YNT+I G       +++  L   M + K +
Sbjct: 223 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM-ETKGI 281

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KP+  TYN L+   C+     +A  ++  M+   I PD V +N L  A+ + G+   AE+
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341

Query: 192 MLFEM-QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           +  EM ++    P+      ++ G+CK   +E+ M     M +  +  N V + +LI GF
Sbjct: 342 LYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF 401

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
              +D D        M   GV PD++T++ ++D   + G +     +F+ M K  ++ DI
Sbjct: 402 FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDI 461

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             ++ + +   +AG+ +    +  S+   GV PNVV +TT++SG+C     + A +++ +
Sbjct: 462 VTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVE 521

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           M E G  PN  TY TL+           + EL++ M   G     ST  LV +
Sbjct: 522 MKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTN 574



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 209/432 (48%), Gaps = 11/432 (2%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G    L TY+  +    R+ +    L+++ K+ K G  P  +  N+++N       + EA
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +  +M + G +P T T+ TL+ G     K  E++ L++ M   K  +P+  TY  ++ 
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV-KGCQPDLVTYGAVIN 223

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C +   + A N++ KM    I+ D V YNT+     +Y     A  +  +M+   ++P
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   ++S  C  G   DA R L  M E  ++P+LV FN+LI  F  +K+   V+ A 
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAF--VKEGKLVE-AE 340

Query: 264 TLMEEFGVK-----PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
            L +E  VK     PDVV ++T++  +     + +  E+F +M + G+  +   ++ L  
Sbjct: 341 KLYDEM-VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           G+ +A +   A+ +   M   GVHP+++ +  ++ G CN   ++ A+ ++E M +  +  
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           ++ TY T++    +A +     +L   +  KGV+P   T   +   +   GL  EA  + 
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519

Query: 439 KSAEEDRQSMPN 450
              +ED   +PN
Sbjct: 520 VEMKED-GPLPN 530



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 195/416 (46%), Gaps = 37/416 (8%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  +A  +F  +++    P+++ ++ L++A+ +  +F  ++SL  +++  G+  +   ++
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
             IN       +  A+ I  KM   G  P+  T N+L+ G                    
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNG-------------------- 154

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
                           +C  N I EA  +V +MV  G QPD VT+ TL     Q+ +   
Sbjct: 155 ----------------FCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASE 198

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  ++  M     +P+  T G +++G CK G  + A+  L +M++ ++  ++V++N++I 
Sbjct: 199 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIID 258

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G    K  D        ME  G+KPDV T++ ++    + G       +  DM++  I P
Sbjct: 259 GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINP 318

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKY-GVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           D+  F+ L   +V+ G+  +AE +   M K     P+VV + T+I G+C   +++  M +
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEV 378

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           + +M + G+  N  TY TL+ G+ +A+    A+ + + M   GV P   T  ++ D
Sbjct: 379 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLD 434



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 169/352 (48%), Gaps = 2/352 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+P  A  + N + +      ++ Y T++  L + K       L +K+E  G+
Sbjct: 222 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 281

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD   +N +I+     G   +A ++   M +    P    +N LI  +   GK  E+ K
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M + K+  P+   YN L++ +C    +EE   V  +M   G+  + VTY TL   +
Sbjct: 342 LYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF 401

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q  +   A+ +  +M ++ V P+  T  I++ G C  GN+E A+     M++ ++  ++
Sbjct: 402 FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDI 461

Query: 241 VVFNSLIKGFLDI-KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           V + ++I+      K  DG D   +L  + GVKP+VVT++T+M  +   GL  +   +F 
Sbjct: 462 VTYTTMIEALCKAGKVEDGWDLFCSLSLK-GVKPNVVTYTTMMSGFCRKGLKEEADALFV 520

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
           +M + G  P+   ++ L +  +R G+   +  ++  MR  G   +   F  V
Sbjct: 521 EMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLV 572



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 142/307 (46%), Gaps = 14/307 (4%)

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           +++A  +   MV S   P  V ++ L  A A+  +      +  +MQN  +  N  T  I
Sbjct: 56  LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---ME 267
            ++ +C+   +  A+  L +M +L   P++V  NSL+ GF      + + +A+ L   M 
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFC---HGNRISEAVALVDQMV 172

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
           E G +PD VTF+T++          +   + + MV  G +PD+  +  +  G  + GEP 
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL- 386
            A ++L  M K  +  +VV++ T+I G C    M  A  ++ KM   GI P++ TY  L 
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292

Query: 387 --LWGYGEAKQPWR-AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             L  YG     W  A  LL  M EK + P       + D++   G   EA+++     +
Sbjct: 293 SCLCNYGR----WSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348

Query: 444 DRQSMPN 450
            +   P+
Sbjct: 349 SKHCFPD 355


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 203/417 (48%), Gaps = 13/417 (3%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           EG  P  +T+  L+    +        S+++K+ K G +PD I  N  I      G + +
Sbjct: 97  EGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQ 156

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+    K+   G      +Y TLI G   VG+   +L+LL+ +   K V+ N   YN ++
Sbjct: 157 ALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVD-GKLVQLNAVMYNTVI 215

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
                   + +A+++  +MVA  I PD VTY+ L R +   G+   A  +  +M    ++
Sbjct: 216 DGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIK 275

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+  T  I+V G+CKEG ++ A   L  M   ++ PN+  FN+L+ GF   +        
Sbjct: 276 PDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTV 335

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
             +M + G+KP+VVT+ ++MD +     + K ++IF+ M + G+  ++H ++I+  G+ +
Sbjct: 336 FAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCK 395

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
             +  KA  +   M    + P+VV + ++I G C + K+  A  +  +M + G  PN+ T
Sbjct: 396 IKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIIT 455

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           Y ++L              LL  ++++G++P   T  ++       G    A++V +
Sbjct: 456 YNSIL------------NALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFE 500



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 187/366 (51%), Gaps = 15/366 (4%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG+ H+A    + L+  G     ++Y TL+  L +    ++ L L+ +V+   ++ ++++
Sbjct: 151 KGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVM 210

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I+  S+  +V++A  ++ +M      P   TY+ LI+G+  VGK ++++ L   M 
Sbjct: 211 YNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMI 270

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            + N+KP+  T+NILV  +C +  +++A NV+  M+   I+P+  T+NTL   + +  + 
Sbjct: 271 LE-NIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKM 329

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
              + +   M    ++PN  T   ++ GYC    +  A +    M +  V  N+  +N +
Sbjct: 330 KEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIM 389

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I GF  IK  D   K    M    + PDVVT+++++D    +G +    ++ ++M   G 
Sbjct: 390 INGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQ 449

Query: 307 EPDIHVF-SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
            P+I  + SIL              ++LT ++  G+ PN+   T +I G C + K++ A 
Sbjct: 450 PPNIITYNSIL-------------NALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAAR 496

Query: 366 SIYEKM 371
            ++E +
Sbjct: 497 KVFEDL 502



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/375 (21%), Positives = 171/375 (45%), Gaps = 40/375 (10%)

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ--D 128
           I+    S +VD A+ +F  +       T   +N ++   G++ K +    +L L  Q   
Sbjct: 40  ISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKIL---GSLVKSKHYHTVLSLSQQMEF 96

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           + + PN  T+NIL+  +C    I  A++V+ K++  G +PD +T NT             
Sbjct: 97  EGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTF------------ 144

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
                                  + G+C +G +  A+ F  ++  L  H + V + +LI 
Sbjct: 145 -----------------------IKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLIN 181

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G   + ++    + L  ++   V+ + V ++T++D  S    +    +++ +MV   I P
Sbjct: 182 GLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISP 241

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D+  +S L +G+   G+ + A  +   M    + P+V  F  ++ G+C   ++++A ++ 
Sbjct: 242 DVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVL 301

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           + M    I PN+ T+ TL+ G+ + ++    + +  +M ++G++P   T   + D +  +
Sbjct: 302 DMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLV 361

Query: 429 GLAREAKRVLKSAEE 443
               +AK++  +  +
Sbjct: 362 KQVNKAKKIFNTMSQ 376



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 144/296 (48%), Gaps = 24/296 (8%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           + Y T++  +++ K       L S++    + PD + ++A+I      G + +A+ +F K
Sbjct: 209 VMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNK 268

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M     KP   T+N L+ G+   G+ +++  +L +M   +++KPN  T+N LV  +C   
Sbjct: 269 MILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMM-MIQDIKPNVSTFNTLVDGFCKDR 327

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            ++E   V   M+  GI+P+ VTY +L   Y    +  +A+++   M    V  N  +  
Sbjct: 328 KMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYN 387

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD----------------- 252
           I+++G+CK   ++ AM+    M    + P++V +NSLI G                    
Sbjct: 388 IMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDR 447

Query: 253 ------IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
                 I  +  ++  LT +++ G++P++ T + ++     +G +   +++F+D++
Sbjct: 448 GQPPNIITYNSILNALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLL 503


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 186/365 (50%), Gaps = 1/365 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV KG+      ++  ++  G  P ++TY TL+    RQ  F     L  ++ +  + P 
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++  +I        + EA  +F+ M++SG  P   TYNT++ GY  +   +++L+L Q
Sbjct: 228 VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQ 287

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D  + PN  T+ IL+   C  + +  A   +  M + G+ P+   YN L   Y + 
Sbjct: 288 EMLGD-GLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKA 346

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A  +  E++ +++ P+  T  I++ G C    ME+A   L  MK+    PN V +
Sbjct: 347 GNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTY 406

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+LI G+    + +   +  + M E G++P+++TFST++D +  AG M     ++ +MV 
Sbjct: 407 NTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI 466

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ PD+  ++ L  G+ + G  ++A  +   M++ G+HPNV   + +I G C   ++  
Sbjct: 467 KGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISD 526

Query: 364 AMSIY 368
           A+ ++
Sbjct: 527 AIKLF 531



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 215/459 (46%), Gaps = 46/459 (10%)

Query: 35  LVAALTRQKRFK---SILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAM------- 84
           L+  L   +R +   S+ +++S++E     P+  +F  +I A SE G V+EA+       
Sbjct: 96  LIQCLQNSRRSRICCSVFNVLSRLESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKMD 153

Query: 85  -------------------------KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
                                    K++  M   G  P   TY TLI G    G   ++ 
Sbjct: 154 VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAF 213

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +L   M + K + P    Y IL+R  C ++ I EA ++   M  SG+ P+  TYNT+   
Sbjct: 214 RLFDEMIE-KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDG 272

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           Y +     +A ++  EM  + + PN  T GI++ G CK   M  A +FL  M    V PN
Sbjct: 273 YCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPN 332

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           + V+N LI G+     +  + +AL+L   +E+  + PDV T+S ++        M +   
Sbjct: 333 IFVYNCLIDGYCK---AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADG 389

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +  +M K G  P+   ++ L  GY + G  +KA  + + M + G+ PN++ F+T+I G+C
Sbjct: 390 LLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC 449

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
            A KM+ AM +Y +M   G+ P++  Y  L+ G+ +      A  L + M+E G+ P   
Sbjct: 450 KAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVF 509

Query: 417 TIQLVADSWRAIGLAREAKRVL--KSAEEDRQSMPNKKD 453
           T+  + D     G   +A ++   K+  +   S  N+ D
Sbjct: 510 TLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELD 548



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 185/363 (50%), Gaps = 1/363 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P +     ++  L ++ RF ++  +   +   G  P+ + +  +I+ C   G+  +A ++
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F +M +    PT   Y  LI+G     +  E+  + + M ++  + PN  TYN ++  +C
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM-RNSGMLPNLYTYNTMMDGYC 274

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               +++A  +  +M+  G+ P+ VT+  L     +  E   A + L +M +  V PN  
Sbjct: 275 KIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               ++ GYCK GN+ +A+     +++ E+ P++  ++ LIKG   +   +  D  L  M
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           ++ G  P+ VT++T++D +   G M K  E+   M + GIEP+I  FS L  GY +AG+ 
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           + A  + T M   G+ P+VV +T +I G       + A  ++++M E G++PN+ T   L
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514

Query: 387 LWG 389
           + G
Sbjct: 515 IDG 517



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 97/470 (20%), Positives = 188/470 (40%), Gaps = 41/470 (8%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G  +  EA  +   + ++G  P  +TY TL+    ++   +  + + S++ + G++P+
Sbjct: 378 LCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPN 437

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I F+ +I+   ++G ++ AM ++ +M   G  P    Y  LI G+   G  +E+ +L +
Sbjct: 438 IITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHK 497

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M Q+  + PN  T + L+   C    I +A  +   +  +G        N L R+  Q 
Sbjct: 498 EM-QEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF--LAKTGTDTTGSKTNELDRSLYQM 554

Query: 184 GE---------------TYRAEQMLFEMQNNQVRPNERT------CGIIVSGYCKEGNME 222
                              R  ++     NNQ + +  T          +  Y +  N  
Sbjct: 555 CSLALSLFRGISEPCICVIRVTKLF--ATNNQPKAHLHTHLKPPKSNQTLKRYLQSSNTS 612

Query: 223 DAMRFLYRMKELEVHPNLVVFNSLIKGF--LDIKDSDGVDKAL-TLMEEFGVKPDVVTFS 279
             + F   +  L  +P+ +   SL+       +K S    K +  L+  FG +P +   +
Sbjct: 613 KVLLFFRIL--LRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQT 670

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
           +++  +S+ G +     +FD++    +     V S     YV    P KA  +   M+  
Sbjct: 671 SLISMYSATGNVADAHNMFDEIPSKNLISWTSVIS----AYVDNQRPNKALQLFRQMQMD 726

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
            V P++V  T  +S   +   +     I+  +   G++ +L    +L+  Y +  +   A
Sbjct: 727 DVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTA 786

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMP 449
                V+      P   T   V  +    GL  E K+  +S +ED    P
Sbjct: 787 RRFSLVL------PNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRP 830



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 99/486 (20%), Positives = 191/486 (39%), Gaps = 90/486 (18%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           + E+G  P +IT++TL+    +  + ++ + L +++   G+ PD + + A+I+   + GN
Sbjct: 429 MTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGN 488

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK--LLQLMSQDKNVKPN--D 135
             EA ++ ++M+++G  P   T + LI G    G+  +++K  L +  +     K N  D
Sbjct: 489 TKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELD 548

Query: 136 RT-YNILVRAWCSKNSIEEAWNVVY---KMVASGIQPDAVTY--------NTLARAYAQY 183
           R+ Y +   A      I E    V    K+ A+  QP A  +        N   + Y Q 
Sbjct: 549 RSLYQMCSLALSLFRGISEPCICVIRVTKLFATNNQPKAHLHTHLKPPKSNQTLKRYLQS 608

Query: 184 GETYR------------------------------------AEQMLFEMQNNQVRPNERT 207
             T +                                     +QM   + N    P    
Sbjct: 609 SNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFL 668

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
              ++S Y   GN+ DA    + M +     NL+ + S+I  ++D +  +   +    M+
Sbjct: 669 QTSLISMYSATGNVADA----HNMFDEIPSKNLISWTSVISAYVDNQRPNKALQLFRQMQ 724

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
              V+PD+VT +  + A +  G +   + I   +   G++ D+ + + L   Y + GE  
Sbjct: 725 MDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIG 784

Query: 328 KAESI-----------------------------LTSMRK-YGVHPNVVMFTTVISGWCN 357
            A                                  SM++ Y + P +  F  ++   C 
Sbjct: 785 TARRFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCR 844

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           A  +  A   YE + ++ + PN   + TLL G    +  W  + L++   ++   P  S+
Sbjct: 845 AGLLTEA---YEFILKMPVRPNAVVWRTLL-GACSLQGMWDKKMLVRNQIKQRRDPGCSS 900

Query: 418 IQLVAD 423
           I++  D
Sbjct: 901 IEVGID 906



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/206 (21%), Positives = 85/206 (41%), Gaps = 36/206 (17%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +AH +F    +E     LI++T++++A    +R    L L  +++ D ++PD +  
Sbjct: 680 GNVADAHNMF----DEIPSKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTV 735

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK------------- 114
              ++AC++ G +D    I   ++  G        N+LI  Y   G+             
Sbjct: 736 TVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRFSLVLPN 795

Query: 115 ----------------PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVV 158
                            EE  +  + M +D +++P    +  +V   C    + EA+  +
Sbjct: 796 DVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFI 855

Query: 159 YKMVASGIQPDAVTYNTLARAYAQYG 184
            KM    ++P+AV + TL  A +  G
Sbjct: 856 LKM---PVRPNAVVWRTLLGACSLQG 878


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 191/388 (49%), Gaps = 7/388 (1%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           I +  L   L + + F      I  +E  G KP+ + +N +I+  S  GN++ A +I   
Sbjct: 180 IVFDLLEGKLKKAREF------IGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDA 233

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M+  G +P + TY +LI G    G+ EE+  L   M +   V PN  TYN L+  +C+K 
Sbjct: 234 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLV-PNAVTYNTLIDGYCNKG 292

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            +E A++   +MV  GI P   TYN L  A    G    A+ M+ EM+   + P+  T  
Sbjct: 293 DLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYN 352

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
           I+++GY + GN + A      M    + P  V + SLI            D     + + 
Sbjct: 353 ILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 412

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           GV PDV+ F+ ++D   + G + +   +  +M +  + PD   F+ L +G  R G+ ++A
Sbjct: 413 GVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 472

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             +L  M+  G+ P+ + + T+ISG+     ++ A  + ++M  IG NP L TY  L+  
Sbjct: 473 RMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKC 532

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKST 417
             + ++   AEELL+ M  KG+ P  ST
Sbjct: 533 LCKNQEGDLAEELLKEMVNKGISPDDST 560



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 196/388 (50%), Gaps = 7/388 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  +A      +   G +P +++Y T++   + +   +    ++  +   G++PDS  
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           + ++I+   + G ++EA  +F KM + G  P   TYNTLI GY N G  E +      M 
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + K + P+  TYN+LV A   +  + EA +++ +M   GI PDA+TYN L   Y++ G  
Sbjct: 306 K-KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNA 364

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            RA  +  EM +  + P   T   ++    +   M++A     ++ +  V P++++FN++
Sbjct: 365 KRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAM 424

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           I G      +  V++A  L++E     V PD VTF+T+M      G + + + + D+M  
Sbjct: 425 IDGHC---ANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKX 481

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GI+PD   ++ L  GY R G+ + A  +   M   G +P ++ +  +I   C   +   
Sbjct: 482 RGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDL 541

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYG 391
           A  + ++M   GI+P+  TY +L+ G G
Sbjct: 542 AEELLKEMVNKGISPDDSTYLSLIEGMG 569



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 151/291 (51%), Gaps = 6/291 (2%)

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           +++A   +  M   G +P+ V+YNT+   Y+  G    A ++L  M+   + P+  T G 
Sbjct: 189 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 248

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF- 269
           ++SG CKEG +E+A     +M E+ + PN V +N+LI G+ +  D   +++A +  +E  
Sbjct: 249 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGD---LERAFSYRDEMV 305

Query: 270 --GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
             G+ P V T++ ++ A    G MG+  ++  +M K GI PD   ++IL  GY R G  +
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           +A  +   M   G+ P  V +T++I       +M+ A  ++EK+ + G++P++  +  ++
Sbjct: 366 RAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMI 425

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            G+       RA  LL+ M+ K V P + T   +       G   EA+ +L
Sbjct: 426 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 476



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 142/329 (43%), Gaps = 77/329 (23%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG    A    + ++++G  P++ TY  LV AL  + R      +I ++ K G+ PD+I 
Sbjct: 291 KGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAIT 350

Query: 67  FNAMINACSESGN-----------------------------------VDEAMKIFQKMK 91
           +N +IN  S  GN                                   + EA  +F+K+ 
Sbjct: 351 YNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKIL 410

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
           D G  P    +N +I G+   G  E +  LL+ M + K+V P++ T+N L++  C +  +
Sbjct: 411 DQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDR-KSVPPDEVTFNTLMQGRCREGKV 469

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           EEA  ++ +M   GI+PD ++YNTL                                   
Sbjct: 470 EEARMLLDEMKXRGIKPDHISYNTL----------------------------------- 494

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           +SGY + G+++DA      M  +  +P L+ +N+LIK     ++ D  ++ L  M   G+
Sbjct: 495 ISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGI 554

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            PD  T+ ++++       MG    + +D
Sbjct: 555 SPDDSTYLSLIEG------MGNVDTLVED 577



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 94/214 (43%), Gaps = 40/214 (18%)

Query: 2   NILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NIL+      G    A  + N ++ +G  PT +TYT+L+  L+R+ R K    L  K+  
Sbjct: 352 NILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILD 411

Query: 58  DGMKPDSILFNAMINACSESGNVD-----------------------------------E 82
            G+ PD I+FNAMI+    +GNV+                                   E
Sbjct: 412 QGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEE 471

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A  +  +MK  G KP   +YNTLI GYG  G  +++  +   M       P   TYN L+
Sbjct: 472 ARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEM-LSIGFNPTLLTYNALI 530

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           +  C     + A  ++ +MV  GI PD  TY +L
Sbjct: 531 KCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 564


>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 917

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 209/414 (50%), Gaps = 1/414 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG+   A ++ N +IE G +P++ T+ T++ A  ++   +       ++E  G+  ++I+
Sbjct: 336 KGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIV 395

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N MI+   ++ ++ +A  +F++M+     P   T+NTL+ G+   GK E+  +LL+ +S
Sbjct: 396 YNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLS 455

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
               +  +    ++ V   C     +EA  ++  ++  GI P  V +N++  AY   G  
Sbjct: 456 V-SGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLE 514

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            RA      M    + P+  TC  ++    ++G++++A   LY M +       + F  L
Sbjct: 515 ERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVL 574

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + G+  I   +  +     M+  GV PD V F+  ++    +GLM    ++F DM++ G 
Sbjct: 575 LDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGF 634

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+  V++ L  G+ + G+  +A  ++  M K G+ P++     +I G C   +M+ A+ 
Sbjct: 635 VPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIE 694

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
            +  MC +G++P++ TY TL+ GY +A     A++L+  M + G  P  +T  +
Sbjct: 695 TFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNI 748



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 177/376 (47%), Gaps = 1/376 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A+ +F  +  +   P  IT+ TLVA   R  + +    L+  +   G+  DS L +  +
Sbjct: 411 QANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTV 470

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                +G  DEAMK+ + +   G  P+   +N++I  YGN G  E +     +M +   +
Sbjct: 471 AGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVK-FGL 529

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  T + L+ +   K S++EAW  +Y M+  G     + +  L   Y + G    AE 
Sbjct: 530 TPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAES 589

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  EM+   V P+       ++G C  G M DA      M      PN  V+NSLI GF 
Sbjct: 590 LWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFC 649

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
            +   +   K +  M + G+ PD+ T + I+      G M    E F DM + G+ PDI 
Sbjct: 650 KVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIV 709

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++ L  GY +A +   A+ ++  M   G  P++  +   I G+C   K+ RA+ I E++
Sbjct: 710 TYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEEL 769

Query: 372 CEIGINPNLKTYETLL 387
             +GI PN  TY T++
Sbjct: 770 ISVGIVPNTVTYNTMI 785



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 198/419 (47%), Gaps = 1/419 (0%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           +L+  G       +F  ++ +G  P   T+  L+    R+   +   +L+  + K   +P
Sbjct: 262 LLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEP 321

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D   +N +INA    G    A+ +   M ++GCKP+ +T+ T+I  +   G  E + K  
Sbjct: 322 DVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYF 381

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             + +D  +  N   YNI++  +     I +A  +  +M    I PD +T+NTL   + +
Sbjct: 382 DEI-EDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYR 440

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
           YG+     ++L ++  + +  +   C + V+G C  G  ++AM+ L  +    + P++V 
Sbjct: 441 YGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVA 500

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           FNS+I  + +    +    A  +M +FG+ P   T S+++ +    G + +      DM+
Sbjct: 501 FNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMI 560

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G       F++L  GY R G    AES+   M+  GV P+ V F   I+G C +  M 
Sbjct: 561 DKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMT 620

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            A  ++  M   G  PN   Y +L+ G+ +  +   A +L++ M ++G+ P   T+ ++
Sbjct: 621 DAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMI 679



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 176/381 (46%), Gaps = 13/381 (3%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D  + + ++ A  +S    EA++I  KM++ G  P  S  + L +     G      KL 
Sbjct: 217 DYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLF 276

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             + + K   PN+ T+N+L+  +C K        +++ M     +PD  +YN +  A   
Sbjct: 277 GDVVR-KGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCL 335

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G++  A  +L  M  N  +P+  T   I+  +CKEGN+E A ++   ++++ +  N +V
Sbjct: 336 KGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIV 395

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +N +I G++  +D   + +A  L EE   K   PD +TF+T++      G       +  
Sbjct: 396 YNIMISGYVKARD---ISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLR 452

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           D+  +G+  D  +  +   G   AG   +A  +L ++   G+ P+VV F ++I+ + NA 
Sbjct: 453 DLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAG 512

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGY---GEAKQPWRAEELLQVMEEKGVRPKKS 416
             +RA   Y  M + G+ P+  T  +LL      G   + W A   L  M +KG      
Sbjct: 513 LEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIA---LYDMIDKGFPVTNM 569

Query: 417 TIQLVADSWRAIGLAREAKRV 437
              ++ D +  IG    A+ +
Sbjct: 570 AFTVLLDGYFRIGAVNMAESL 590



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 142/290 (48%), Gaps = 8/290 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV KG   EA      +I++G   T + +T L+    R        SL ++++  G+ PD
Sbjct: 543 LVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPD 602

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ F A IN    SG + +A  +F  M   G  P    YN+LI G+  VGK  E+LKL++
Sbjct: 603 AVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVR 662

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M++ + + P+  T N+++   C +  ++ A      M   G+ PD VTYNTL   Y + 
Sbjct: 663 EMNK-RGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKA 721

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +   A+ ++ +M ++   P+  T  I + GYC    +  A+  L  +  + + PN V +
Sbjct: 722 FDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTY 781

Query: 244 NSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGL 290
           N++I    ++     +D A+ L   + +    P+ VT + ++  +   G+
Sbjct: 782 NTMINAVCNVI----LDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGM 827



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/326 (22%), Positives = 152/326 (46%), Gaps = 10/326 (3%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRF-KSILSLISKVEKDGMKPDSIL 66
           G    A Y +  +++ G  P+  T ++L+ +L R+    ++ ++L   ++K G    ++ 
Sbjct: 512 GLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDK-GFPVTNMA 570

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F  +++     G V+ A  ++ +MK  G  P    +   I G    G   ++  +   M 
Sbjct: 571 FTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDML 630

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + K   PN+  YN L+  +C    + EA  +V +M   G+ PD  T N +     + G  
Sbjct: 631 R-KGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRM 689

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A +   +M    + P+  T   ++ GYCK  ++  A   + +M +    P+L  +N  
Sbjct: 690 KLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIR 749

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           I G+  ++    +++A+ ++EE    G+ P+ VT++T+++A  +  ++     +   ++K
Sbjct: 750 IHGYCTVRK---INRAVMILEELISVGIVPNTVTYNTMINAVCNV-ILDHAMILTAKLLK 805

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKA 329
               P+    ++L   + + G P+KA
Sbjct: 806 MAFVPNTVTVNVLLSQFCKQGMPEKA 831



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 116/239 (48%), Gaps = 8/239 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G   +A+ +F+ ++ +G  P    Y +L+    +  +    L L+ ++ K G+
Sbjct: 610 INGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGL 669

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG---NVGKPEE 117
            PD    N +I    + G +  A++ F  M   G  P   TYNTLI GY    +VG  ++
Sbjct: 670 LPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADD 729

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
               L +   D   +P+  TYNI +  +C+   I  A  ++ ++++ GI P+ VTYNT+ 
Sbjct: 730 ----LMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMI 785

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
            A       + A  +  ++      PN  T  +++S +CK+G  E A+ +  ++ E+ +
Sbjct: 786 NAVCNVILDH-AMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLSEIHL 843



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/274 (21%), Positives = 117/274 (42%)

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR 226
           + D    +TL RA+ +    + A ++L +M+   V PN     I+     + G+     +
Sbjct: 215 ESDYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWK 274

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
               +      PN   FN LI  F     +   +  L +M +F  +PDV +++ +++A  
Sbjct: 275 LFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANC 334

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
             G       + + M++ G +P I  F  +   + + G  + A      +   G+  N +
Sbjct: 335 LKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTI 394

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
           ++  +ISG+  A  + +A  ++E+M    I P+  T+ TL+ G+    +      LL+ +
Sbjct: 395 VYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDL 454

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
              G+    S   +        G   EA ++L++
Sbjct: 455 SVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLEN 488


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 188/352 (53%), Gaps = 1/352 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  +A  ++  L+E+G    L+T   L+  L +    +  + L+ K+ + G   D
Sbjct: 466 LCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLD 525

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I +N +I+ C + G V+E  K+  +M   G +P T TYN LI G   +GK +E++ L  
Sbjct: 526 KITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWN 585

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
              + +++ PN  TY +++  +C  + IEE   +  +++   ++ ++V YNTL RAY + 
Sbjct: 586 -ECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRN 644

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G T  A ++  +M++  + P   T   ++ G C  G MEDA   +  M++  + PN+V +
Sbjct: 645 GNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCY 704

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            +LI G+  +   D V   L  M  + + P+ +T++ ++D +S +G M    ++  +MV 
Sbjct: 705 TALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVG 764

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
            GI PD   +++L  G+ + G+ ++   I   M + G+  + + +TT++ GW
Sbjct: 765 KGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGW 816



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 215/467 (46%), Gaps = 37/467 (7%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV   +  +++++F  +  +G  P +  ++T + A  +  + +  + L   +EK G+ P+
Sbjct: 222 LVKANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPN 280

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +I+   + GN+DEA +  +KM   G   T  TY+ LI G   + K  E+  +L+
Sbjct: 281 VVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLK 340

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
             + +K   PN+  YN L+  +C   ++ +A  +   MV+ GI P++VT N++ + + + 
Sbjct: 341 -ETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKI 399

Query: 184 GETYRAEQMLFEMQNN-----------------------------------QVRPNERTC 208
           G+  +AE +L EM +                                     +RPN+   
Sbjct: 400 GQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLL 459

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             +V G CKEG   DA+   +R+ E     NLV  N+LI G     +     + L  M E
Sbjct: 460 TTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLE 519

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G   D +T++T++      G + +  ++  +MVK GIEPD   +++L  G  R G+  +
Sbjct: 520 RGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDE 579

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A ++    +   + PNV  +  +I G+C A K++    ++ ++    +  N   Y TL+ 
Sbjct: 580 AVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIR 639

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
            Y        A +L   M  KG+ P  +T   +      IG   +AK
Sbjct: 640 AYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAK 686



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 103/419 (24%), Positives = 201/419 (47%), Gaps = 1/419 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A  I   ++  G       +TT++  L    RF+S L  + ++    M+P+  L 
Sbjct: 400 GQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLL 459

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             ++    + G   +A++++ ++ + G      T N LI G    G  +E+++LL+ M  
Sbjct: 460 TTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKM-L 518

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           ++    +  TYN L+   C +  +EE + +  +MV  GI+PD  TYN L     + G+  
Sbjct: 519 ERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLD 578

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +  E ++  + PN  T G+++ GYCK   +E+  +    +    +  N VV+N+LI
Sbjct: 579 EAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLI 638

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           + +    ++    K    M   G+ P   T+S+++    + G M   + + D+M K G+ 
Sbjct: 639 RAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLL 698

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P++  ++ L  GY + G+  K  ++L  M  Y +HPN + +T +I G+  +  M+ A  +
Sbjct: 699 PNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKL 758

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
             +M   GI P+  TY  L  G+ +  +     ++   M ++G+   + T   +   W+
Sbjct: 759 LHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQ 817



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/472 (23%), Positives = 220/472 (46%), Gaps = 40/472 (8%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA      ++++G   TLITY+ L+  L + ++F    S++ +  + G  P+
Sbjct: 291 LCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPN 350

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++N +I+   + GN+ +A++I   M   G  P + T N++I+G+  +G+ E++  +L+
Sbjct: 351 EVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILE 410

Query: 124 LMSQD----------------------------------KNVKPNDRTYNILVRAWCSKN 149
            M                                     +N++PND     LV   C + 
Sbjct: 411 EMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEG 470

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
              +A  + ++++  G   + VT N L     + G    A ++L +M       ++ T  
Sbjct: 471 KHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYN 530

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            ++SG CKEG +E+  +    M +  + P+   +N LI G   I     +D+A+ L  E 
Sbjct: 531 TLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGK---LDEAVNLWNEC 587

Query: 270 GVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
             +   P+V T+  ++D +  A  + + +++F +++   +E +  V++ L + Y R G  
Sbjct: 588 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNT 647

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +A  +   MR  G+ P    ++++I G CN  +M+ A  + ++M + G+ PN+  Y  L
Sbjct: 648 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTAL 707

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           + GY +  Q  +   +LQ M    + P K T  ++ D +   G  + A ++L
Sbjct: 708 IGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLL 759



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 152/316 (48%), Gaps = 1/316 (0%)

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +K V P  +T   L+ +    N +E+++  V++ +  G+ PD   ++T   A+ + G+  
Sbjct: 205 NKGVFPTVKTCTFLLSSLVKANELEKSY-WVFETMRQGVSPDVYLFSTAINAFCKGGKVE 263

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A Q+ F+M+   V PN  T   ++ G CK GN+++A RF  +M +  V+  L+ ++ LI
Sbjct: 264 DAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLI 323

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G + ++  +  +  L    E G  P+ V ++T++D +   G +G    I  DMV  GI 
Sbjct: 324 NGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGIN 383

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P+    + + +G+ + G+ ++AE IL  M   G   N   FTT+I   C   + + A+  
Sbjct: 384 PNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRF 443

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
             +M    + PN     TL+ G  +  +   A EL   + EKG      T   +      
Sbjct: 444 LREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCK 503

Query: 428 IGLAREAKRVLKSAEE 443
            G  +EA R+LK   E
Sbjct: 504 TGNMQEAVRLLKKMLE 519



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 1/175 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA  + + +  +G  PT  TY++L+  +    R +    LI ++ K+G+ P+ + +
Sbjct: 645 GNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCY 704

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            A+I    + G +D+ + + Q+M      P   TY  +I GY   G  + + KLL  M  
Sbjct: 705 TALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV- 763

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
            K + P+  TYN+L   +C +  IEE + +   M   G+  D +TY TL   + Q
Sbjct: 764 GKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQ 818


>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
          Length = 472

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 184/366 (50%), Gaps = 2/366 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT  TY  L+   TR  R +  L+   ++ + G++ D+I+ + ++    E+   DEA+ I
Sbjct: 75  PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 134

Query: 87  F-QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV-KPNDRTYNILVRA 144
              +  + GC P   +YN L+K   N GK  ++  LL++M++   V  P+   YN ++  
Sbjct: 135 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDG 194

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +  +  + +A ++  +MV  GI PD VTYN++  A  +     +AE  L +M N +V PN
Sbjct: 195 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 254

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   ++ GY   G  ++A+R    M+   + P++V  + L+                 
Sbjct: 255 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 314

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M   G  PDV +++ +++ +++ G +    ++FD M+  GI PD + F++  K Y   G
Sbjct: 315 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCG 374

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              KA  I   MR +GV P+VV + TVI+  C   KM  AM  + +M + G+ P+   Y 
Sbjct: 375 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 434

Query: 385 TLLWGY 390
            L+ G+
Sbjct: 435 CLIQGF 440



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/393 (20%), Positives = 156/393 (39%), Gaps = 72/393 (18%)

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + P S  +  +++ C+ +   + A+  F ++  +G +      + L+KG+    + +E+L
Sbjct: 73  LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 132

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG--IQPDAVTYNTLA 177
            +L   + +    P+  +YNIL+++ C++    +A N++  M   G    PD V YNT  
Sbjct: 133 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNT-- 190

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
                                            ++ G+ KEG++  A      M +  + 
Sbjct: 191 ---------------------------------VIDGFFKEGDVNKACDLFKEMVQRGIP 217

Query: 238 PNLVVFNSLIKGFLDIKDSDGVD-----------------------------------KA 262
           P+LV +NS++      +  D  +                                   + 
Sbjct: 218 PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 277

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              M    + PDVVT S +M +    G + + +++FD M   G  PD+  ++I+  GY  
Sbjct: 278 FKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYAT 337

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G       +   M   G+ P+   F   I  + N   + +AM I+ +M + G+ P++ T
Sbjct: 338 KGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVT 397

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           Y T++       +   A E    M ++GV P K
Sbjct: 398 YRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 430



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 112/243 (46%), Gaps = 3/243 (1%)

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD-GV 259
           + P   T  I++    +    E A+ F  ++    +  + ++ + L+KGF + K +D  +
Sbjct: 73  LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 132

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG--IEPDIHVFSILA 317
           D  L    E G  PDV +++ ++ +  + G  G+   +   M + G    PD+  ++ + 
Sbjct: 133 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVI 192

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            G+ + G+  KA  +   M + G+ P++V + +V+   C A  M +A +   +M    + 
Sbjct: 193 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 252

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           PN  TY  L++GY    Q   A  + + M    + P   T+ ++  S    G  +EA+ V
Sbjct: 253 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 312

Query: 438 LKS 440
             +
Sbjct: 313 FDT 315



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 1/147 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L   GK  EA  +F+ +  +G  P + +Y  ++     +     +  L   +  DG+
Sbjct: 297 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 356

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   FN  I A +  G +D+AM IF +M+D G KP   TY T+I     +GK +++++
Sbjct: 357 APDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 416

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCS 147
               M  D+ V P+   YN L++ +C+
Sbjct: 417 KFNQMI-DQGVAPDKYAYNCLIQGFCT 442



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 90/194 (46%), Gaps = 3/194 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F  +      P ++T + L+ +L +  + K    +   +   G  PD   +
Sbjct: 269 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 328

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N M+N  +  G + +   +F  M   G  P   T+N  IK Y N G  ++++ +   M +
Sbjct: 329 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEM-R 387

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D  VKP+  TY  ++ A C    +++A     +M+  G+ PD   YN L + +  +G   
Sbjct: 388 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGILL 447

Query: 188 RAEQMLFEMQNNQV 201
           + + + F   NN++
Sbjct: 448 KTQGIDF--GNNEI 459


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 244/481 (50%), Gaps = 43/481 (8%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           V +G   EA  +   +I  G    L+  T+L+     Q    S L+L +K+ +DG+ P+ 
Sbjct: 301 VAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNK 360

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY--------------- 109
           + ++ +I  C  SGN+++A +++ +MK +G  P+    N+L++GY               
Sbjct: 361 VTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDE 420

Query: 110 ------GNV-------------GKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
                  N+             GK +E+  LL  M  ++ + PN  +YN ++   C K +
Sbjct: 421 AVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMV-NQGMVPNVVSYNDMILGHCRKGN 479

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           ++ A +V   M+A  ++P+ VTY+ L     + G++ +A  +  +M +  + P + T   
Sbjct: 480 MDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNT 539

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---ME 267
           I++G CK G M +A   L    E    P+ + +NS++ GF  IK+ + +D AL +   M 
Sbjct: 540 IINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGF--IKEGN-IDSALAVYREMC 596

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
           EFGV P+VVT++++++ +  +  +    +  D+M + G+E D+  +S L  G+ +  + +
Sbjct: 597 EFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDME 656

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            A+ +   + + G+ PN +++ ++ISG+ +   M+ A+  Y+KM    I  +L TY TL+
Sbjct: 657 SAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLI 716

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS 447
            G  +  +   A +L   M  KG+ P   T  ++ +     G    A+++L+  E DR++
Sbjct: 717 DGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILE--EMDRKN 774

Query: 448 M 448
           M
Sbjct: 775 M 775



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 199/389 (51%), Gaps = 1/389 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   GK  EA  + + ++ +G  P +++Y  ++    R+       S+ S +    +
Sbjct: 436 MSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDL 495

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP+ + ++ +I+   + G+ ++A+ +F +M      PT  T+NT+I G   VG+  E+  
Sbjct: 496 KPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARD 555

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L+   ++  + P+  TYN +V  +  + +I+ A  V  +M   G+ P+ VTY +L   +
Sbjct: 556 KLKNFLEEGFI-PSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGF 614

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A +   EM+   +  +      ++ G+CK  +ME A    + + E+ + PN 
Sbjct: 615 CKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNR 674

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +V+NS+I GF D+ + +        M    +  D+ T++T++D     G +    +++ +
Sbjct: 675 IVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYME 734

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  GI PDI  F +L  G    G+ + A  IL  M +  + P+V+++ T+I+G+     
Sbjct: 735 MLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGN 794

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           ++ A +++++M + G+ P+  TY+ L+ G
Sbjct: 795 LKEAFTLHDEMLDRGLVPDDVTYDILING 823



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 204/419 (48%), Gaps = 2/419 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  EA   F    E G +     Y+ ++ A+ ++      L L+ ++++ G  P    
Sbjct: 233 EGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEAT 292

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F ++I AC   GN+ EA+++ ++M + G         +L+KGY   G  + +L L   ++
Sbjct: 293 FTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKIT 352

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +D  + PN  TY++L+   C+  +IE+A  +  +M  +GI P     N+L R Y +    
Sbjct: 353 ED-GLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLK-APL 410

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
           +     LF+   +    N  T  I++S  CK G M++A   L  M    + PN+V +N +
Sbjct: 411 WEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDM 470

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G     + D      + M    +KP+VVT+S ++D     G   K  ++FD M+   I
Sbjct: 471 ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNI 530

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P    F+ +  G  + G+  +A   L +  + G  P+ + + +++ G+     +  A++
Sbjct: 531 APTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALA 590

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           +Y +MCE G++PN+ TY +L+ G+ ++ +   A +    M EKG+    +    + D +
Sbjct: 591 VYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGF 649



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 199/425 (46%), Gaps = 2/425 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N  +   +   A   FN +I +   P +     L+ AL R+     +  L +K+   G+
Sbjct: 157 LNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGI 216

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D    + M+ AC + G V+EA + F++ K+ G K     Y+ +I+           L+
Sbjct: 217 YGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLE 276

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M +++   P++ T+  ++ A  ++ ++ EA  +  +M+  G   + V   +L + Y
Sbjct: 277 LLEEM-KERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGY 335

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A  +  ++  + + PN+ T  +++ G C  GN+E A     +MK   + P++
Sbjct: 336 CAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSV 395

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
              NSL++G+L     +   K      + GV  ++ T++ +M      G M +   + D+
Sbjct: 396 FNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDN 454

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV  G+ P++  ++ +  G+ R G    A S+ + M    + PNVV ++ +I G      
Sbjct: 455 MVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGD 514

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
            ++A+ ++++M  + I P   T+ T++ G  +  Q   A + L+   E+G  P   T   
Sbjct: 515 SEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNS 574

Query: 421 VADSW 425
           + D +
Sbjct: 575 IVDGF 579



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 127/278 (45%)

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           + R +N L+ A+   N IE A +    M+   + P     N L  A  +         + 
Sbjct: 149 DHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLY 208

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
            +M    +  +  T  ++V    KEG +E+A  +    KE  V  +   ++ +I+     
Sbjct: 209 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK 268

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
            +S+   + L  M+E G  P   TF++++ A  + G M +   + ++M+  G   ++ V 
Sbjct: 269 PNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVA 328

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           + L KGY   G    A ++   + + G+ PN V ++ +I G CN+  +++A  +Y +M  
Sbjct: 329 TSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKL 388

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
            GI P++    +LL GY +A     A +L     + GV
Sbjct: 389 NGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV 426


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 196/415 (47%), Gaps = 1/415 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P + T   L+ +     R     S+++K+ K G +PD   F  +I      G + EA
Sbjct: 95  GVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEA 154

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +F KM D G +P   TY TLI G   VG    +++LL+ M Q  N +P+   Y  ++ 
Sbjct: 155 LHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQG-NCQPDVVIYTSIID 213

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C    + EA+N+  +MV  GI PD  TY +L  A     E      +L +M N+++ P
Sbjct: 214 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 273

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +      +V   CKEG + +A   +  M +  V P++V + +L+ G     + D   K  
Sbjct: 274 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVF 333

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            +M   G  PDV++++T+++ +     + K   +F++M +    PD   ++ L  G    
Sbjct: 334 DMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHV 393

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G  Q A ++   M   G  P++V ++ ++   C    ++ AM++ + +    +NP+++ Y
Sbjct: 394 GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVY 453

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             ++ G   A +   A +L   +  KG+ P   T  ++       GL  EA ++ 
Sbjct: 454 NIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLF 508



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 207/457 (45%), Gaps = 36/457 (7%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           FN L+     P+++ +  L+ ++ + K + ++LSL ++++  G+ P+    N +IN+   
Sbjct: 53  FNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCH 112

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
              V  A  +  K+   G +P  +T+ T                                
Sbjct: 113 LNRVGFAFSVLAKILKLGHQPDPTTFTT-------------------------------- 140

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
               L+R  C +  I EA ++  KM+  G QP+ VTY TL     + G T  A ++L  M
Sbjct: 141 ----LIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM 196

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
           +    +P+      I+   CK+  + +A     +M    + P++  + SL+    ++ + 
Sbjct: 197 EQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEW 256

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
             V   L  M    + PDVV FST++DA    G + +  EI D M++ G+EPD+  ++ L
Sbjct: 257 KHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTL 316

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G+    E  +A  +   M + G  P+V+ +TT+I+G+C   K+ +AM ++E+MC    
Sbjct: 317 MDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEW 376

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            P+ KTY TL++G     +   A  L   M  +G  P   T  ++ DS        EA  
Sbjct: 377 IPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMA 436

Query: 437 VLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF 473
           +LK+ E    +   +   I ++ + R   L A+   F
Sbjct: 437 LLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLF 473



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 206/420 (49%), Gaps = 7/420 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA ++F+ +I+EG +P ++TY TL+  L +     + + L+  +E+   +PD
Sbjct: 145 LCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPD 204

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++ ++I++  +   V EA  +F +M   G  P   TY +L+    N+ + +    LL 
Sbjct: 205 VVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLN 264

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K + P+   ++ +V A C +  + EA  +V  M+  G++PD VTY TL   +   
Sbjct: 265 QMVNSK-ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQ 323

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E   A ++   M      P+  +   +++GYCK   ++ AM     M   E  P+   +
Sbjct: 324 SEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTY 383

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N+L+ G   +     +  A+ L  E    G  PD+VT+S ++D+      + +   +   
Sbjct: 384 NTLMYGLCHVGR---LQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKA 440

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +  + + PDI V++I+  G  RAGE + A  + +++   G+HP+V  +  +I G C    
Sbjct: 441 IEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGL 500

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ +M     +P+  TY T+  G+ +  +  RA +LL+ M  +G       + L
Sbjct: 501 LNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADSCFLML 560



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 136/268 (50%), Gaps = 4/268 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +GK  EAH I + +I+ G  P ++TYTTL+     Q      + +   + + G 
Sbjct: 282 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 341

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I +  +IN   +   +D+AM +F++M      P T TYNTL+ G  +VG+ ++++ 
Sbjct: 342 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIA 401

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M   +   P+  TY+IL+ + C    +EEA  ++  + AS + PD   YN +    
Sbjct: 402 LFHEMVA-RGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGM 460

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + GE   A  +   + +  + P+  T  I++ G CK G + +A +    M   +  P+ 
Sbjct: 461 CRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDG 520

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             +N++ +GFL    ++   +A+ L+EE
Sbjct: 521 CTYNTIARGFL---QNNETLRAIQLLEE 545



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 129/300 (43%), Gaps = 35/300 (11%)

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
           N++++A +   +++     P  V +  L  + A+         +  +M +  V PN  T 
Sbjct: 44  NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTL 103

Query: 209 GIIVS-----------------------------------GYCKEGNMEDAMRFLYRMKE 233
            I+++                                   G C EG + +A+    +M +
Sbjct: 104 NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 163

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
               PN+V + +LI G   + ++    + L  ME+   +PDVV +++I+D+      + +
Sbjct: 164 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTE 223

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
              +F  MV  GI PDI  ++ L        E +   ++L  M    + P+VV+F+TV+ 
Sbjct: 224 AFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVD 283

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             C   K+  A  I + M + G+ P++ TY TL+ G+    +   A ++  +M  KG  P
Sbjct: 284 ALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAP 343


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 244/481 (50%), Gaps = 43/481 (8%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           V +G   EA  +   +I  G    L+  T+L+     Q    S L+L +K+ +DG+ P+ 
Sbjct: 341 VAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNK 400

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY--------------- 109
           + ++ +I  C  SGN+++A +++ +MK +G  P+    N+L++GY               
Sbjct: 401 VTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDE 460

Query: 110 ------GNV-------------GKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
                  N+             GK +E+  LL  M  ++ + PN  +YN ++   C K +
Sbjct: 461 AVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMV-NQGMVPNVVSYNDMILGHCRKGN 519

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           ++ A +V   M+A  ++P+ VTY+ L     + G++ +A  +  +M +  + P + T   
Sbjct: 520 MDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNT 579

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---ME 267
           I++G CK G M +A   L    E    P+ + +NS++ GF  IK+ + +D AL +   M 
Sbjct: 580 IINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGF--IKEGN-IDSALAVYREMC 636

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
           EFGV P+VVT++++++ +  +  +    +  D+M + G+E D+  +S L  G+ +  + +
Sbjct: 637 EFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDME 696

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            A+ +   + + G+ PN +++ ++ISG+ +   M+ A+  Y+KM    I  +L TY TL+
Sbjct: 697 SAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLI 756

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS 447
            G  +  +   A +L   M  KG+ P   T  ++ +     G    A+++L+  E DR++
Sbjct: 757 DGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILE--EMDRKN 814

Query: 448 M 448
           M
Sbjct: 815 M 815



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 199/389 (51%), Gaps = 1/389 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   GK  EA  + + ++ +G  P +++Y  ++    R+       S+ S +    +
Sbjct: 476 MSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDL 535

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP+ + ++ +I+   + G+ ++A+ +F +M      PT  T+NT+I G   VG+  E+  
Sbjct: 536 KPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARD 595

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L+   ++  + P+  TYN +V  +  + +I+ A  V  +M   G+ P+ VTY +L   +
Sbjct: 596 KLKNFLEEGFI-PSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGF 654

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A +   EM+   +  +      ++ G+CK  +ME A    + + E+ + PN 
Sbjct: 655 CKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNR 714

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +V+NS+I GF D+ + +        M    +  D+ T++T++D     G +    +++ +
Sbjct: 715 IVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYME 774

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  GI PDI  F +L  G    G+ + A  IL  M +  + P+V+++ T+I+G+     
Sbjct: 775 MLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGN 834

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           ++ A +++++M + G+ P+  TY+ L+ G
Sbjct: 835 LKEAFTLHDEMLDRGLVPDDVTYDILING 863



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 204/419 (48%), Gaps = 2/419 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  EA   F    E G +     Y+ ++ A+ ++      L L+ ++++ G  P    
Sbjct: 273 EGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEAT 332

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F ++I AC   GN+ EA+++ ++M + G         +L+KGY   G  + +L L   ++
Sbjct: 333 FTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKIT 392

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +D  + PN  TY++L+   C+  +IE+A  +  +M  +GI P     N+L R Y +    
Sbjct: 393 ED-GLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLK-APL 450

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
           +     LF+   +    N  T  I++S  CK G M++A   L  M    + PN+V +N +
Sbjct: 451 WEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDM 510

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G     + D      + M    +KP+VVT+S ++D     G   K  ++FD M+   I
Sbjct: 511 ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNI 570

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P    F+ +  G  + G+  +A   L +  + G  P+ + + +++ G+     +  A++
Sbjct: 571 APTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALA 630

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           +Y +MCE G++PN+ TY +L+ G+ ++ +   A +    M EKG+    +    + D +
Sbjct: 631 VYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGF 689



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 199/425 (46%), Gaps = 2/425 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N  +   +   A   FN +I +   P +     L+ AL R+     +  L +K+   G+
Sbjct: 197 LNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGI 256

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D    + M+ AC + G V+EA + F++ K+ G K     Y+ +I+           L+
Sbjct: 257 YGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLE 316

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M +++   P++ T+  ++ A  ++ ++ EA  +  +M+  G   + V   +L + Y
Sbjct: 317 LLEEM-KERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGY 375

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A  +  ++  + + PN+ T  +++ G C  GN+E A     +MK   + P++
Sbjct: 376 CAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSV 435

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
              NSL++G+L     +   K      + GV  ++ T++ +M      G M +   + D+
Sbjct: 436 FNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDN 494

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV  G+ P++  ++ +  G+ R G    A S+ + M    + PNVV ++ +I G      
Sbjct: 495 MVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGD 554

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
            ++A+ ++++M  + I P   T+ T++ G  +  Q   A + L+   E+G  P   T   
Sbjct: 555 SEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNS 614

Query: 421 VADSW 425
           + D +
Sbjct: 615 IVDGF 619



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 127/278 (45%)

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           + R +N L+ A+   N IE A +    M+   + P     N L  A  +         + 
Sbjct: 189 DHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLY 248

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
            +M    +  +  T  ++V    KEG +E+A  +    KE  V  +   ++ +I+     
Sbjct: 249 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK 308

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
            +S+   + L  M+E G  P   TF++++ A  + G M +   + ++M+  G   ++ V 
Sbjct: 309 PNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVA 368

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           + L KGY   G    A ++   + + G+ PN V ++ +I G CN+  +++A  +Y +M  
Sbjct: 369 TSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKL 428

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
            GI P++    +LL GY +A     A +L     + GV
Sbjct: 429 NGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV 466


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 216/460 (46%), Gaps = 37/460 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIE---EGHRP-------------------TLITYTTLVAA 38
           +++LVG      A Y+ N L++   + H+P                   T   Y  L+  
Sbjct: 65  IHVLVGSKLLSHARYLLNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNVYGELIIV 124

Query: 39  LTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPT 98
           L + +  +  LS+  KV   G        N ++    ++G  +   +I+++M  +G  P+
Sbjct: 125 LCKMELVEEALSMYHKV---GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPS 181

Query: 99  TSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVV 158
             T+ TLI G    G    + ++   M + K + P    Y IL+R  CS N IEEA ++ 
Sbjct: 182 VITFGTLIDGCCRQGDLLRAQEMFDEM-RVKGIVPTVIVYTILIRGLCSDNKIEEAESMH 240

Query: 159 YKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
             M   G+ P+  TYNTL   Y +     +A ++  +M    + P+  T GI++ G CK 
Sbjct: 241 RAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKF 300

Query: 219 GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDV 275
           G M+ A      M +  V PN+ V+NSLI  +  + D   V +A+ L   +E F V PDV
Sbjct: 301 GEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGD---VSEAMALFLELERFEVSPDV 357

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
            T+S ++    S     +   IF+ M K GI  +   ++ L  G  + G+  KA  I + 
Sbjct: 358 FTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQ 417

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M + GV PNV+ F+T+I G+C    +Q AM IY +M    ++P++ TY  ++ G+ +   
Sbjct: 418 MTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGS 477

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
              A +L   M + G+ P   TI  + D     GL ++ K
Sbjct: 478 MKEALKLYSDMLDNGITPNCYTISCLLD-----GLCKDGK 512



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 200/428 (46%), Gaps = 14/428 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +LV  G+      I+  +I  G  P++IT+ TL+    RQ        +  ++   G+
Sbjct: 154 LYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGI 213

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  I++  +I        ++EA  + + M++ G  P   TYNTL+ GY  +   +++L+
Sbjct: 214 VPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALR 273

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L Q M  +  V P+  T+ IL+   C    ++ A N+   M+   + P+   YN+L  AY
Sbjct: 274 LYQDMLGEGLV-PDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAY 332

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A  +  E++  +V P+  T  I++ G C     E+A     +M +  +  N 
Sbjct: 333 CKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANS 392

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +NSLI G       D   +  + M E GV+P+V+TFST++D +     +     I+ +
Sbjct: 393 VTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSE 452

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV   + PD+  ++ +  G+ + G  ++A  + + M   G+ PN    + ++ G C   K
Sbjct: 453 MVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGK 512

Query: 361 MQRAMSIYEKMCEI----------GINPNLK---TYETLLWGYGEAKQPWRAEELLQVME 407
           +  A+ ++ +  E           G  P+L     Y  L+ G  +  Q  +A +L   M 
Sbjct: 513 ISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMR 572

Query: 408 EKGVRPKK 415
             G++P +
Sbjct: 573 RYGLQPDE 580



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 192/418 (45%), Gaps = 16/418 (3%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L    K  EA  +   + E G  P + TY TL+    +    K  L L   +  +G+ PD
Sbjct: 227 LCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPD 286

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + F  +I+   + G +  A  +F  M      P  + YN+LI  Y  VG   E++ L  
Sbjct: 287 VVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALF- 345

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           L  +   V P+  TY+IL+R  CS +  EEA N+  KM   GI  ++VTYN+L     + 
Sbjct: 346 LELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKE 405

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+  +A ++  +M  N V PN  T   ++ GYCK  N++ AM     M    + P++V +
Sbjct: 406 GKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTY 465

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            ++I G           K  + M + G+ P+  T S ++D     G +    E+F + ++
Sbjct: 466 TAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIE 525

Query: 304 ----------AGIEPDI--HV-FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
                      G +P +  HV ++ L  G  + G+  KA  + + MR+YG+ P+ V++  
Sbjct: 526 FQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVV 585

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           ++ G      +   M ++  M + G+ PN   +  L   Y E+     A+   + +EE
Sbjct: 586 MLRGLFQVKYI--LMMLHADMLKFGVIPNSAVHVILCECYQESGFLKSAQNCSKDLEE 641



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 143/295 (48%), Gaps = 18/295 (6%)

Query: 157 VVYKMVASGIQPDA-VTYNTLARAYAQYGETYRAEQMLF----EMQNNQVRPNERTCGII 211
           +++ +V S +   A    N L +   +  + Y A Q+ F     +++++  PN     II
Sbjct: 64  IIHVLVGSKLLSHARYLLNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNVYGELII 123

Query: 212 VSGYCKEGNMEDAMRFLYRM-KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF- 269
           V   CK   +E+A+   +++   L +    V+   L+K       +   +    + EE  
Sbjct: 124 V--LCKMELVEEALSMYHKVGAALTIQACNVLLYVLVK-------TGRFELLWRIYEEMI 174

Query: 270 --GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
             G+ P V+TF T++D     G + + QE+FD+M   GI P + V++IL +G     + +
Sbjct: 175 SNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIE 234

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           +AES+  +MR+ GV+PNV  + T++ G+C     ++A+ +Y+ M   G+ P++ T+  L+
Sbjct: 235 EAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILI 294

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
            G  +  +   A  L   M +  V P  +    + D++  +G   EA  +    E
Sbjct: 295 DGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELE 349


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/467 (25%), Positives = 229/467 (49%), Gaps = 51/467 (10%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L  +G+  +A  + + ++EEGH+P  +TY T+V  + +     S L+++ K+++  +
Sbjct: 17  MNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQI 76

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K + ++++A+++   + GN  +A  IF +M + G  P   TYN +I GY + GK  ++ +
Sbjct: 77  KANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQ 136

Query: 121 LLQLMSQ----------------------------------DKNVKPNDRTYNILVRAWC 146
           LL+ M +                                   +N+ P   TY+ ++  +C
Sbjct: 137 LLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFC 196

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTL----ARA-------YAQYGETYRAEQMLFE 195
             + +E+A ++   MV+ G  PD +T NTL     RA       + Q G    A+ +  E
Sbjct: 197 KHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQE 256

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M +N V P+  TC  +++G C+ G +E A+      ++ ++  +    N +I G      
Sbjct: 257 MISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMC---K 313

Query: 256 SDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
            + VD+A  L       GV+ DVVT++ ++  +   G   + ++I+ +M+  GI P    
Sbjct: 314 GNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVT 373

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++ +  G+ +    ++A  ++ SM   G  P+VV F+T+I G+C A ++   + ++ +MC
Sbjct: 374 YNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMC 433

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           + G+  +  TY  L+ G+ +      A+++ + M   GV P   T +
Sbjct: 434 QRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFR 480



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 176/356 (49%), Gaps = 18/356 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N  V +GK   A  ++  ++     PT ITY++++    +  R +    +   +   G 
Sbjct: 157 INAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGC 216

Query: 61  KPDSILFNAMINACSES-----------GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY 109
            PD I  N +I+ C  +           GNV+ A  +FQ+M  +G  P   T NTL+ G 
Sbjct: 217 SPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGL 276

Query: 110 GNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
              GK E++L++ ++  + K +  +  T NI++   C  N ++EAW++   +  +G++ D
Sbjct: 277 CENGKLEKALEMFKVFQKSK-MDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETD 335

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
            VTYN L   + + G   RAE +  EM    + P+  T   +V G+CK+  +E+A + + 
Sbjct: 336 VVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVD 395

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWS 286
            M      P++V F++LIKG+     +  VD  L L  E    G+  D +T++ ++  + 
Sbjct: 396 SMVSEGCSPDVVTFSTLIKGYC---KAGRVDDGLELFSEMCQRGLVADTITYNALIHGFC 452

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
             G +   Q+IF++MV +G+ PD   F  +  G     E QK  ++L  ++K   H
Sbjct: 453 KVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQKSVDH 508



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 111/466 (23%), Positives = 210/466 (45%), Gaps = 47/466 (10%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++E G    ++T+TTL+  L R+ R    L+L+ ++ ++G +PD++ +  ++N   + G+
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
              A+ + +KM +S  K     Y+ ++      G   ++  +   M  +K + PN  TYN
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEM-HEKGIFPNVLTYN 119

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++  +CS     +A  ++  M+   I PD VT++ L  A+ + G+   AE++  EM   
Sbjct: 120 CMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRR 179

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK----- 254
            + P   T   ++ G+CK   +EDA      M      P+++  N+LI G    K     
Sbjct: 180 NIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIH 239

Query: 255 ---DSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGK--------------- 293
                  V+ A  L +E    GV PD+VT +T++      G + K               
Sbjct: 240 GFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDL 299

Query: 294 ----CQEIFDDMVKA----------------GIEPDIHVFSILAKGYVRAGEPQKAESIL 333
               C  I + M K                 G+E D+  ++IL   +V+ G   +AE I 
Sbjct: 300 DTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIY 359

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M   G+ P+ V + +++ G+C   +++ A  + + M   G +P++ T+ TL+ GY +A
Sbjct: 360 LEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKA 419

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            +     EL   M ++G+     T   +   +  +G    A+ + +
Sbjct: 420 GRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFE 465



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 179/393 (45%), Gaps = 12/393 (3%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G   + + F  ++N     G V +A+ +  +M + G +P   TY T++ G   +G    +
Sbjct: 5   GCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSA 64

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           L +L+ M + + +K N   Y+ +V   C   +  +A N+  +M   GI P+ +TYN +  
Sbjct: 65  LNMLRKMDESQ-IKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMID 123

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            Y  YG+   AEQ+L +M    + P+  T   +++ + KEG +  A      M    + P
Sbjct: 124 GYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFP 183

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG---LMGKCQ 295
             + ++S+I GF      +       LM   G  PD++T +T++D    A    + G CQ
Sbjct: 184 TTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQ 243

Query: 296 --------EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
                   ++F +M+  G+ PDI   + L  G    G+ +KA  +    +K  +  +   
Sbjct: 244 VGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTAT 303

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
              +I+G C   K+  A  ++  +   G+  ++ TY  L+  + +     RAE++   M 
Sbjct: 304 CNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEML 363

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            KG+ P   T   + D +       EA++++ S
Sbjct: 364 CKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDS 396


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 221/422 (52%), Gaps = 4/422 (0%)

Query: 25  HRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAM 84
           ++ ++++   L++AL ++  F  +  +  ++ +  + P+ I FN +IN   + G +++A 
Sbjct: 191 YKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAG 250

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
            +   MK  G  P   TYNTLI GY   G VGK  ++  +L+ M ++K V PN  T+N+L
Sbjct: 251 DVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENK-VSPNSVTFNVL 309

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +  +C   ++  A  V  +M + G++P  VTYN+L       G+   A+ +L EM ++ +
Sbjct: 310 IDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNL 369

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           +PN  T   +++GYCK+  +E+A      + +  + PN++ FN+L+ G+      +    
Sbjct: 370 KPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFL 429

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
              +M E G  P+  T++ ++  +   G M + + + ++M   G++ D   ++IL   + 
Sbjct: 430 LQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWC 489

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
              EP+KA  ++  M   G+ P+ + +  +++G+C    ++ A+++ ++M + G   N+ 
Sbjct: 490 EKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVV 549

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY  L+ GY    +   A  LL  M EKG+ P ++T +++ +     G   + +  L  A
Sbjct: 550 TYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHLYHA 609

Query: 442 EE 443
            +
Sbjct: 610 SQ 611



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 190/389 (48%), Gaps = 4/389 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ LV + +     +++  +I     P LIT+ T++  L +  +      ++  ++  G 
Sbjct: 202 LSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGF 261

Query: 61  KPDSILFNAMINACSESGNVDEAMK---IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            P+ + +N +I+   + G V +  K   I ++M ++   P + T+N LI G+        
Sbjct: 262 WPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSA 321

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +LK+ + M Q + +KP   TYN LV   C++  + EA  ++ +M++S ++P+ +TYN L 
Sbjct: 322 ALKVFEEM-QSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALI 380

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
             Y +      A ++   +    + PN  T   ++ GYCK G ME+A      M E    
Sbjct: 381 NGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFL 440

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           PN   +N LI GF      + V   L  M+  GVK D VT++ ++ AW       K   +
Sbjct: 441 PNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARL 500

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            D+M+  G++P    ++IL  GY   G  + A ++   M K G   NVV +  +I G+C 
Sbjct: 501 IDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCR 560

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             K++ A  +  +M E G+ PN  TYE +
Sbjct: 561 KGKLEDANGLLNEMLEKGLIPNRTTYEII 589



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 181/348 (52%), Gaps = 9/348 (2%)

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET-- 186
           + + PN  T+N ++   C    + +A +VV  M   G  P+ VTYNTL   Y + G    
Sbjct: 224 RKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGK 283

Query: 187 -YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
            Y+A+ +L EM  N+V PN  T  +++ G+CK+ N+  A++    M+   + P +V +NS
Sbjct: 284 MYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNS 343

Query: 246 LIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           L+ G     +   +++A  L++E     +KP+V+T++ +++ +    L+ + +E+FD++ 
Sbjct: 344 LVNGLC---NEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIG 400

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           K G+ P++  F+ L  GY + G+ ++A  +   M + G  PN   +  +I G+C   KM+
Sbjct: 401 KQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKME 460

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
              ++  +M   G+  +  TY  L+  + E K+P +A  L+  M +KG++P   T  ++ 
Sbjct: 461 EVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILL 520

Query: 423 DSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASN 470
           + +   G  R A  + K  E++ +        + ++   RK  L  +N
Sbjct: 521 NGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDAN 568



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 154/279 (55%), Gaps = 7/279 (2%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  +  +G +PT++TY +LV  L  + +      L+ ++    +KP+ I +NA+IN   
Sbjct: 325 VFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYC 384

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           +   ++EA ++F  +   G  P   T+NTL+ GY   GK EE+  LLQ +  +K   PN 
Sbjct: 385 KKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAF-LLQKVMLEKGFLPNA 443

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TYN L+  +C +  +EE  N++ +M   G++ D VTYN L  A+ +  E  +A +++ E
Sbjct: 444 STYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDE 503

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL---D 252
           M +  ++P+  T  I+++GYC EGN+  A+    +M++     N+V +N LI+G+     
Sbjct: 504 MLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGK 563

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
           ++D++G+   L  M E G+ P+  T+  I +     G +
Sbjct: 564 LEDANGL---LNEMLEKGLIPNRTTYEIIKEEMMEKGFL 599



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 131/256 (51%), Gaps = 6/256 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +GK +EA  + + ++    +P +ITY  L+    ++K  +    L   + K G+
Sbjct: 345 VNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGL 404

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I FN +++   + G ++EA  + + M + G  P  STYN LI G+   GK EE   
Sbjct: 405 TPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKN 464

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M Q + VK +  TYNIL+ AWC K   ++A  ++ +M+  G++P  +TYN L   Y
Sbjct: 465 LLNEM-QCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGY 523

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A  +  +M+      N  T  +++ GYC++G +EDA   L  M E  + PN 
Sbjct: 524 CMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNR 583

Query: 241 VVF-----NSLIKGFL 251
             +       + KGFL
Sbjct: 584 TTYEIIKEEMMEKGFL 599



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 117/261 (44%), Gaps = 6/261 (2%)

Query: 184 GETYRAEQMLFE---MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           GET  +  ++F    + + Q   N     ++V  Y +       +    R  +     ++
Sbjct: 136 GETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSV 195

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +  N L+   +   +  GV+     M    + P+++TF+T+++     G + K  ++ DD
Sbjct: 196 LSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDD 255

Query: 301 MVKAGIEPDIHVFSILAKGYV---RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           M   G  P++  ++ L  GY    R G+  KA++IL  M +  V PN V F  +I G+C 
Sbjct: 256 MKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCK 315

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              +  A+ ++E+M   G+ P + TY +L+ G     +   A+ LL  M    ++P   T
Sbjct: 316 DENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVIT 375

Query: 418 IQLVADSWRAIGLAREAKRVL 438
              + + +    L  EA+ + 
Sbjct: 376 YNALINGYCKKKLLEEARELF 396



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 38/161 (23%)

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L    V+  E    E +   M +  + PN++ F TVI+G C   K+ +A  + + M   G
Sbjct: 201 LLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWG 260

Query: 376 INPNLKTYETLLWGY---GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
             PN+ TY TL+ GY   G   + ++A+ +L+ M E  V P   T  ++ D +       
Sbjct: 261 FWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGF------- 313

Query: 433 EAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF 473
                              KDE          NLSA+   F
Sbjct: 314 ------------------CKDE----------NLSAALKVF 326


>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/488 (24%), Positives = 224/488 (45%), Gaps = 69/488 (14%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   EA   F+ L  EG++P  +TY  L+    +   F   LS++S++E++   PD++ 
Sbjct: 306 EGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVT 365

Query: 67  FN-----------------------------------AMINACSESGNVDEAMKIFQKMK 91
           +N                                    +INA    G++D+A+++F +M 
Sbjct: 366 YNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMM 425

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLL----------------------------- 122
           + GC P  +TYN ++   G     EE +K+L                             
Sbjct: 426 ELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHK 485

Query: 123 ---QLMSQDKN--VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
              Q+  + KN   +P+  T+N L+ A+    S  +A  +  +M+ +G  P   TYN L 
Sbjct: 486 YVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALL 545

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
            A A+ G+   AE ++ +M+N   RP+E +  ++V  Y K GN++        + + ++ 
Sbjct: 546 NALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIF 605

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P+ ++  +L+      +   G+++A   +++ G KPD+V  ++++  ++   +  +  E+
Sbjct: 606 PSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEM 665

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
              +  AG++PD+   + L   Y R G+  KAE +L  ++  G  P++V + TVI G+C 
Sbjct: 666 LRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCR 725

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              MQ  + I  +M  IG+ P + TY T + GY          +++  M     RP + T
Sbjct: 726 KGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNELT 785

Query: 418 IQLVADSW 425
            ++VAD +
Sbjct: 786 YKIVADGY 793



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/502 (25%), Positives = 218/502 (43%), Gaps = 72/502 (14%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDGMKPDSIL 66
           GK H A  IF  + E G  P+L+TY  ++    +  R +  IL L+ ++   G+  D   
Sbjct: 236 GKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFT 295

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            + +++AC   G +DEA + F  +K  G KP T TYN L+  +G  G   E+L +L  M 
Sbjct: 296 CSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEM- 354

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++ N  P+  TYN +V A+      EE   V+  M + GI P+AVTY T+  AY + G+ 
Sbjct: 355 EENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDI 414

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A +M  +M      PN  T   ++    K+   E+ M+ L  MK     PN + +N++
Sbjct: 415 DKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTM 474

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA-- 304
           +           V++    M+  G +PD  TF+T++ A+   G      ++ ++M+KA  
Sbjct: 475 LAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGF 534

Query: 305 ---------------------------------GIEPDIHVFSILAKGYVRAGEPQKAES 331
                                            G  P    +S++   Y + G  +  E 
Sbjct: 535 SPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEM 594

Query: 332 I----------------------------LTSM-------RKYGVHPNVVMFTTVISGWC 356
           I                            LT M       +K+G  P++V+  +++S + 
Sbjct: 595 IEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFA 654

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
                 RA  +   + + G+ P+L T+ +L+  Y      W+AEE+L++++  G +P   
Sbjct: 655 KNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLV 714

Query: 417 TIQLVADSWRAIGLAREAKRVL 438
           +   V   +   GL +E  R+L
Sbjct: 715 SYNTVIKGFCRKGLMQEGIRIL 736



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 201/447 (44%), Gaps = 38/447 (8%)

Query: 4   LVGKGKPHE-AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           ++G+   H  A  +F+ +  + +   +  YTT++ A +R  ++   + +  ++ + G+ P
Sbjct: 196 ILGRESQHTVASKLFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSP 255

Query: 63  DSILFNAMIN------------------------------------ACSESGNVDEAMKI 86
             + +N M++                                    AC   G +DEA + 
Sbjct: 256 SLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREF 315

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F  +K  G KP T TYN L+  +G  G   E+L +L  M ++ N  P+  TYN +V A+ 
Sbjct: 316 FSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEM-EENNCPPDAVTYNEVVAAYV 374

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                EE   V+  M + GI P+AVTY T+  AY + G+  +A +M  +M      PN  
Sbjct: 375 RAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVA 434

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   ++    K+   E+ M+ L  MK     PN + +N+++           V++    M
Sbjct: 435 TYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREM 494

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           +  G +PD  TF+T++ A+   G      ++ ++M+KAG  P I+ ++ L     R G+ 
Sbjct: 495 KNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDW 554

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           + AES++  MR  G  P+   ++ ++  +     ++    I + + +  I P+     TL
Sbjct: 555 KAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTL 614

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRP 413
           +    + +     E   Q +++ G +P
Sbjct: 615 VLANFKCRSLTGMERAFQALQKHGYKP 641



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/412 (24%), Positives = 190/412 (46%), Gaps = 12/412 (2%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           +V  L R+ +      L   +  D    D   +  +++A S +G    A++IF++M +SG
Sbjct: 193 MVRILGRESQHTVASKLFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESG 252

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ--DKNVKPNDRTYNILVRAWCSKNSIE 152
             P+  TYN ++  YG +G+  +  K+L+L+ +   + +  ++ T + ++ A   +  I+
Sbjct: 253 LSPSLVTYNVMLDVYGKMGRSWD--KILELLDEMRSRGLDFDEFTCSTVLSACGREGLID 310

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           EA      + + G +P  VTYN L   + + G    A  +L EM+ N   P+  T   +V
Sbjct: 311 EAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVV 370

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---MEEF 269
           + Y + G  E+    +  M    + PN V + ++I  +  + D   +DKAL +   M E 
Sbjct: 371 AAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGD---IDKALEMFDQMMEL 427

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G  P+V T++ ++       L  +  +I   M   G  P+   ++ +     + G  +  
Sbjct: 428 GCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYV 487

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             +   M+  G  P+   F T+IS +        A  ++E+M + G +P + TY  LL  
Sbjct: 488 NQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNA 547

Query: 390 YGEAKQPWR-AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
               +  W+ AE ++  M  KG RP +++  L+  S+   G  +  + + KS
Sbjct: 548 LAR-RGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKS 598



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/402 (22%), Positives = 179/402 (44%), Gaps = 36/402 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  +F+ ++E G  P + TY  ++  L ++   + ++ ++  ++ +G  P+ I +
Sbjct: 412 GDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITW 471

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N M+  C + G      ++F++MK+ G +P   T+NTLI  YG  G   ++ K+ + M +
Sbjct: 472 NTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIK 531

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                P   TYN L+ A   +   + A +V+  M   G +P   +Y+ +  +YA+ G   
Sbjct: 532 -AGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVK 590

Query: 188 RAEQ--------------MLFE---------------------MQNNQVRPNERTCGIIV 212
             E               ML                       +Q +  +P+   C  ++
Sbjct: 591 GIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSML 650

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           S + K    + A   L  + +  + P+LV  NSL+  +    D    ++ L +++  G K
Sbjct: 651 SIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGK 710

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           PD+V+++T++  +   GLM +   I  +M   G+ P I  ++    GY   G   +   +
Sbjct: 711 PDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDV 770

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
           ++ M  +   PN + +  V  G+C A +   A+    K+ ++
Sbjct: 771 ISYMIVHNCRPNELTYKIVADGYCKARRYDEAIDFVSKIKDV 812



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 112/212 (52%), Gaps = 7/212 (3%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P+ +   TLV A  + +    +      ++K G KPD +L N+M++  +++   D A ++
Sbjct: 606 PSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEM 665

Query: 87  FQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            + + D+G +P   T+N+L+  Y   G+  K EE L++LQ        KP+  +YN +++
Sbjct: 666 LRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQ----TSGGKPDLVSYNTVIK 721

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +C K  ++E   ++ +M + G+ P   TYNT    YA  G       ++  M  +  RP
Sbjct: 722 GFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRP 781

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
           NE T  I+  GYCK    ++A+ F+ ++K+++
Sbjct: 782 NELTYKIVADGYCKARRYDEAIDFVSKIKDVD 813


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 202/419 (48%), Gaps = 3/419 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P +++Y T++  L ++KR +  + L+ ++E    +P+S  +  +++   + G V+EAM++
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +MK  G +     Y+TLI G+ + G  +    L   M + K + PN   Y+ L+  +C
Sbjct: 68  LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLE-KGISPNVVVYSCLINGFC 126

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            K    EA  V++ M   GIQPD  TY  +     + G   +A  +   M      P+  
Sbjct: 127 KKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTV 186

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T  ++++G CKEG + DA +    M E      +V +N+LI G  +    D   K  + +
Sbjct: 187 TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSL 246

Query: 267 EEFG--VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            E G  V+PDV+TF+T++      G + K  EI+D M++ G   ++    IL   Y+++G
Sbjct: 247 LEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSG 306

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              KA  +   + K G+ P+   ++ +I G+C    +  A  ++ +M   G++P L  Y 
Sbjct: 307 IIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYN 366

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           TL+    +     +A  L Q M+E    P   +  ++ D     G    AK +L   ++
Sbjct: 367 TLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQ 425



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 96/407 (23%), Positives = 203/407 (49%), Gaps = 3/407 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG       +F+ ++E+G  P ++ Y+ L+    ++  ++   +++  + + G++PD   
Sbjct: 93  KGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYT 152

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +  MI    + G   +A+ +F  M + G +P+T TYN LI G    G   ++ K+ + M 
Sbjct: 153 YTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETML 212

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG--IQPDAVTYNTLARAYAQYG 184
           + K  +    +YN L+   C+   ++EA  +   ++  G  ++PD +T+NT+ +   + G
Sbjct: 213 E-KGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEG 271

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
              +A ++   M       N  TC I++  Y K G ++ AM    R+ +L + P+   ++
Sbjct: 272 RLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYS 331

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            +I GF  +   +      + M+  G+ P +  ++T+M +      + + + +F +M ++
Sbjct: 332 VMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKES 391

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
             EPD   F+I+  G ++AG+   A+ +L  M++ G+ P+   +++ I+      +M+ A
Sbjct: 392 NCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEA 451

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
              ++ M   GI P+   Y++L+ G+G   +      LL+ M + GV
Sbjct: 452 KGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGV 498



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 190/403 (47%), Gaps = 36/403 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    KG   EA  + + + E G +P + TYT ++  L +  R +  L L   + + G 
Sbjct: 122 INGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE 181

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P ++ +N +IN   + G + +A KIF+ M + G +    +YNTLI G  N GK +E++K
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMK 241

Query: 121 LLQLMSQDKN-VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           L   + +D N V+P+  T+N +++  C +  +++A  +   M+  G   +  T + L   
Sbjct: 242 LFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGE 301

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY------------------------ 215
           Y + G   +A ++   +    + P+  T  +++ G+                        
Sbjct: 302 YIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPT 361

Query: 216 -----------CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
                      CKE ++E A R    MKE    P+ + FN +I G L   D     + L 
Sbjct: 362 LFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLN 421

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M++ G+ PD  T+S+ ++  S  G M + +  FD M+ +GI PD HV+  L KG+    
Sbjct: 422 DMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLND 481

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           E ++  ++L  M   GV  ++ +  ++++  CN+ +    M +
Sbjct: 482 EIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMEL 524



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 171/348 (49%), Gaps = 3/348 (0%)

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           MK     P   +YNT+I G     + E+++ LL  M +  + +PN  TY IL+   C + 
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEM-EGSSCEPNSFTYCILMDGLCKEG 59

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            +EEA  ++ +M   G++ D V Y+TL   +   G   R + +  EM    + PN     
Sbjct: 60  RVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYS 119

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            +++G+CK+G   +A   L+ M E  + P++  +  +I G      +        LM E 
Sbjct: 120 CLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEK 179

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G +P  VT++ +++     G +G   +IF+ M++ G   ++  ++ L  G    G+  +A
Sbjct: 180 GEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEA 239

Query: 330 ESILTSMRKYG--VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
             + +S+ + G  V P+V+ F TVI G C   ++ +A+ IY+ M E G   NL T   L+
Sbjct: 240 MKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILI 299

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
             Y ++    +A EL + + + G+ P  +T  ++ D +  + +   AK
Sbjct: 300 GEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAK 347



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 151/316 (47%), Gaps = 6/316 (1%)

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
           N+ P+  +YN ++   C +  +E+A +++ +M  S  +P++ TY  L     + G    A
Sbjct: 5   NILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEA 64

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
            ++L EM+   +  +      ++SG+C +G ++        M E  + PN+VV++ LI G
Sbjct: 65  MRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLING 124

Query: 250 FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
           F            L  M E G++PDV T++ ++      G   K  ++FD M + G EP 
Sbjct: 125 FCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPS 184

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
              +++L  G  + G    A  I  +M + G    VV + T+I G CN  K+  AM ++ 
Sbjct: 185 TVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFS 244

Query: 370 KMCEIG--INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
            + E G  + P++ T+ T++ G  +  +  +A E+   M E+G      T  ++   +  
Sbjct: 245 SLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIK 304

Query: 428 IGLAREA----KRVLK 439
            G+  +A    KRV K
Sbjct: 305 SGIIDKAMELWKRVHK 320



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 139/284 (48%), Gaps = 45/284 (15%)

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           I PD V+YNT+     +     +A  +L EM+ +   PN  T  I++ G CKEG +E+AM
Sbjct: 6   ILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAM 65

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           R L  MK                                     G++ DVV +ST++  +
Sbjct: 66  RLLGEMKRK-----------------------------------GLEVDVVVYSTLISGF 90

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
            S G + + + +FD+M++ GI P++ V+S L  G+ + G  ++A ++L +M + G+ P+V
Sbjct: 91  CSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDV 150

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
             +T +I G C   + ++A+ +++ M E G  P+  TY  L+ G  +      A ++ + 
Sbjct: 151 YTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFET 210

Query: 406 MEEKGVRPKKSTIQLVADSWRAIGLAR-----EAKRVLKSAEED 444
           M EKG R     +++V+ +   +GL       EA ++  S  ED
Sbjct: 211 MLEKGKR-----LEVVSYNTLIMGLCNNGKLDEAMKLFSSLLED 249



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 1/205 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P+  TY+ ++    +         L S+++  G+ P    +N ++ +  +  ++++A
Sbjct: 322 GLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQA 381

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            ++FQ+MK+S C+P T ++N +I G    G    + +LL  M Q   + P+  TY+  + 
Sbjct: 382 RRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQ-MGLTPDAYTYSSFIN 440

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
                  +EEA      M+ASGI PD   Y++L + +    E      +L +M +  V  
Sbjct: 441 RLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVIL 500

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFL 228
           +      I++  C        M  L
Sbjct: 501 DLEITNSILTFLCNSAEHLHVMELL 525


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 229/474 (48%), Gaps = 39/474 (8%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  ++N ++E G  PT++TY T++ +  ++   +  L L+ +++  G  P+ + +N ++N
Sbjct: 186 AREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVN 245

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
             S SG +++A ++ Q M   G + +  TY+ LI+GY   G+ EE+ +L + M   +   
Sbjct: 246 GLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEM-LSRGAV 304

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P   TYN ++   C    + +A  ++  MV   + PD V+YNTL   Y + G    A  +
Sbjct: 305 PTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLL 364

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL- 251
             E++   + P+  T   ++ G C+ G+++ AMR    M +    P++  F + ++GF  
Sbjct: 365 FAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCK 424

Query: 252 --------------------------------DIKDSDGVDKALTLMEEF---GVKPDVV 276
                                           ++K  D   KA  + EE    G  PD++
Sbjct: 425 MGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDP-SKAFGMQEEMLARGFPPDLI 483

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T++  +D     G + +  E+   M+  G+ PD   ++ +   ++ AG  +KA ++   M
Sbjct: 484 TYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEM 543

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
              G+ P+VV +T +I  +    +++ A+  + +M E G++PN+ TY  L+ G  + ++ 
Sbjct: 544 LSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKM 603

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            +A      M+ KG+ P K T  ++ +    +G  +EA R+ K    DR+  P+
Sbjct: 604 DQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDM-LDREIQPD 656



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 187/388 (48%), Gaps = 15/388 (3%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG+  EA  +   ++  G  PT++TY T++  L +  R      L+  +    + PD + 
Sbjct: 285 KGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVS 344

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I   +  GN+ EA  +F +++     P+  TYNTLI G   +G  + +++L     
Sbjct: 345 YNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRL----- 399

Query: 127 QDKNVK----PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           +D+ +K    P+  T+   VR +C   ++  A  +  +M+  G+QPD   Y T      +
Sbjct: 400 KDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELK 459

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+  +A  M  EM      P+  T  + + G  K GN+++A   + +M    + P+ V 
Sbjct: 460 LGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVT 519

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           + S+I   L    +  + KA  L  E    G+ P VVT++ ++ +++  G +      F 
Sbjct: 520 YTSIIHAHLM---AGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFF 576

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M + G+ P++  ++ L  G  +  +  +A +    M+  G+ PN   +T +I+  CN  
Sbjct: 577 EMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLG 636

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLL 387
             Q A+ +Y+ M +  I P+  T+ +LL
Sbjct: 637 HWQEALRLYKDMLDREIQPDSCTHRSLL 664



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 93/433 (21%), Positives = 199/433 (45%), Gaps = 15/433 (3%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKV---------------EKDGMKPDSIL 66
           + G + + I+Y+ ++  L R    +S   ++ KV                +  M    ++
Sbjct: 74  QTGFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSVKLI 133

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            + ++    +   +++ + +F KM   G  P     N +++   +     +  + +  + 
Sbjct: 134 LDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVM 193

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +  + P   TYN ++ ++C K  ++EA  ++++M A G  P+ VTYN L    +  GE 
Sbjct: 194 VECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEM 253

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A++++ +M    +  +  T   ++ GYC++G +E+A R    M      P +V +N++
Sbjct: 254 EQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTI 313

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + G           K L +M    + PD+V+++T++  ++  G +G+   +F ++    +
Sbjct: 314 MYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSL 373

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P +  ++ L  G  R G+   A  +   M K+G  P+V  FTT + G+C    +  A  
Sbjct: 374 APSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKE 433

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           ++++M   G+ P+   Y T + G  +   P +A  + + M  +G  P   T  +  D   
Sbjct: 434 LFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLH 493

Query: 427 AIGLAREAKRVLK 439
            +G  +EA  ++K
Sbjct: 494 KLGNLKEASELVK 506



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 114/237 (48%), Gaps = 3/237 (1%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F+ ++  G +P    Y T +    +         +  ++   G  PD I +N  I+
Sbjct: 431 AKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFID 490

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL-LQLMSQDKNV 131
              + GN+ EA ++ +KM  +G  P   TY ++I  +   G   ++  L L+++S  K +
Sbjct: 491 GLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLS--KGI 548

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  TY +L+ ++  +  ++ A    ++M   G+ P+ +TYN L     +  +  +A  
Sbjct: 549 FPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYN 608

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
              EMQ   + PN+ T  I+++  C  G+ ++A+R    M + E+ P+     SL+K
Sbjct: 609 FFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLK 665


>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
 gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 205/410 (50%), Gaps = 5/410 (1%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           ++  L ++ +     SL++ + KDG +PD   + ++I AC  +G   EA+ +F+KM++ G
Sbjct: 4   IINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI-EE 153
           CKPT  TYN ++  YG +G P   +  L    ++  + P++ TYN L+   C + S+ EE
Sbjct: 64  CKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLI-TCCRRGSLYEE 122

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A  V   M + G  PD VTYNTL   Y +      A ++L EM+ N   P+  T   ++S
Sbjct: 123 AAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLIS 182

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
            Y ++G +E+AM    +M E  +  ++  + +++ GF+     +   +    M   G KP
Sbjct: 183 AYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKP 242

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           ++ TF+ ++    + G   +  ++F+++      PDI  ++ L   + + G   +   + 
Sbjct: 243 NICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVF 302

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M++ G  P    + T+IS +       +AM++Y++M + GI P+L TY  +L      
Sbjct: 303 KEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARG 362

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
               ++E++L  M++   +P + T         A    +E  R+L  AEE
Sbjct: 363 GLWEQSEKILAEMQDGMCKPNELT---HCSLLHAYANGKEIGRMLALAEE 409



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/457 (25%), Positives = 223/457 (48%), Gaps = 40/457 (8%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P+++TY +L++A  R    +  + L +++ + G+K D   + AM++    +G  + A
Sbjct: 169 GCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESA 228

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK-------------------LLQL 124
           M++F++M+ +GCKP   T+N LIK +GN GK  E +K                   LL +
Sbjct: 229 MRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAV 288

Query: 125 MSQD----------KNVK-----PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
             Q+          K +K     P   TYN L+ A+    S ++A  +  +M+ +GI PD
Sbjct: 289 FGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPD 348

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
             TYN +  A A+ G   ++E++L EMQ+   +PNE T   ++  Y    N ++  R L 
Sbjct: 349 LSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAY---ANGKEIGRMLA 405

Query: 230 RMKEL---EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
             +E+    + P+ V+  +L+            ++A   ++  G  PD+ T + ++  + 
Sbjct: 406 LAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYG 465

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
              ++ K  EI + M ++G  P +  ++ L   + ++   +++E +L  +   G+ P+++
Sbjct: 466 RRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDII 525

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            + TVI  +C   +M+ A  I+ +M E G+ P++ TY T +  Y        A +++  M
Sbjct: 526 SYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYM 585

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            + G +P ++T   V D +  +    +A + + S  E
Sbjct: 586 IKHGCKPNQNTYNSVIDGYCKLNRRDDAIKFISSLHE 622



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 210/455 (46%), Gaps = 37/455 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+L  +GK   A  + N L ++G  P +  YT+L+ A     R++  + +  K+E++G 
Sbjct: 5   INMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEGC 64

Query: 61  KPDSILFNAMINACSESGNV-DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           KP  I +N ++N   + G   ++   +F+ MK++G  P   TYNTLI         EE+ 
Sbjct: 65  KPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAA 124

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            + + M +     P+  TYN L+  +     I+EA  V+ +M  +G  P  VTYN+L  A
Sbjct: 125 AVFEDM-KSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISA 183

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           YA+ G    A ++  +M    ++ +  T   ++SG+ + G  E AMR    M+     PN
Sbjct: 184 YARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPN 243

Query: 240 LVVFNSLIK-------------------------------GFLDIKDSDGVDKALT---- 264
           +  FN+LIK                                 L +   +G+D  ++    
Sbjct: 244 ICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFK 303

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M+  G  P+  T++T++ A+S  G   +   ++  M+  GI PD+  ++ +     R G
Sbjct: 304 EMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGG 363

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
             +++E IL  M+     PN +   +++  + N  ++ R +++ E++C   I P+    +
Sbjct: 364 LWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLK 423

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           TL+    +      AE     ++ KG  P  ST+ 
Sbjct: 424 TLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLN 458



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 172/348 (49%), Gaps = 1/348 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P ++T+ TL+A   +      +  +  ++++ G  P+   +N +I+A S  G+ D+AM +
Sbjct: 277 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAM 336

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           +++M D+G  P  STYN ++      G  E+S K+L  M QD   KPN+ T+  L+ A+ 
Sbjct: 337 YKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEM-QDGMCKPNELTHCSLLHAYA 395

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           +   I     +  ++ +  I+P AV   TL    ++      AE+   E++     P+  
Sbjct: 396 NGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLS 455

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   +++ Y +   +      L  MKE    P+L  +NSL+      ++ +  ++ L  +
Sbjct: 456 TLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEI 515

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              G+KPD+++++T++ A+   G M +   IF +M ++G+ PD+  ++     Y      
Sbjct: 516 LAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMF 575

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
           ++A  ++  M K+G  PN   + +VI G+C   +   A+     + E+
Sbjct: 576 EEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAIKFISSLHEL 623



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/509 (21%), Positives = 212/509 (41%), Gaps = 70/509 (13%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYT------------------------------- 33
           V  G+  EA  +F  + EEG +PTLITY                                
Sbjct: 44  VSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPD 103

Query: 34  -----TLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
                TL+    R   ++   ++   ++  G  PD + +N +++   +S  + EA+++ +
Sbjct: 104 EYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLR 163

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ--------------------- 127
           +M+ +GC P+  TYN+LI  Y   G  EE+++L   M +                     
Sbjct: 164 EMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTG 223

Query: 128 -------------DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYN 174
                            KPN  T+N L++   ++    E   V  ++      PD VT+N
Sbjct: 224 KDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWN 283

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           TL   + Q G       +  EM+     P   T   ++S Y + G+ + AM    RM + 
Sbjct: 284 TLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDT 343

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            + P+L  +N+++         +  +K L  M++   KP+ +T  +++ A+++   +G+ 
Sbjct: 344 GITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRM 403

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
             + +++    IEP   +   L     +     +AE     +++ G  P++     +I+ 
Sbjct: 404 LALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAI 463

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
           +     + +   I   M E G  P+L TY +L++ + +++   R+EE+L+ +  KG++P 
Sbjct: 464 YGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPD 523

Query: 415 KSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             +   V  ++   G  +EA  +     E
Sbjct: 524 IISYNTVIFAYCRNGRMKEASHIFSEMRE 552



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 184/387 (47%), Gaps = 1/387 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            V  GK   A  +F  +   G +P + T+  L+     + +F  ++ +  +++     PD
Sbjct: 219 FVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPD 278

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N ++    ++G   E   +F++MK  G  P   TYNTLI  Y   G  ++++ + +
Sbjct: 279 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYK 338

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D  + P+  TYN ++ A       E++  ++ +M     +P+ +T+ +L  AYA  
Sbjct: 339 RM-LDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANG 397

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E  R   +  E+ +  + P+      +V    K   + +A R    +K     P+L   
Sbjct: 398 KEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTL 457

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N++I  +   +     ++ L  M+E G  P + T++++M   S +    + +E+  +++ 
Sbjct: 458 NAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILA 517

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GI+PDI  ++ +   Y R G  ++A  I + MR+ G+ P+V+ + T ++ +      + 
Sbjct: 518 KGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEE 577

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGY 390
           A+ +   M + G  PN  TY +++ GY
Sbjct: 578 AIDVVCYMIKHGCKPNQNTYNSVIDGY 604



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 102/187 (54%), Gaps = 7/187 (3%)

Query: 54  KVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG--- 110
           ++++ G  PD    NAMI        V +  +I   MK+SG  P+ +TYN+L+  +    
Sbjct: 444 ELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSE 503

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
           N  + EE LK  ++++  K +KP+  +YN ++ A+C    ++EA ++  +M  SG+ PD 
Sbjct: 504 NFERSEEVLK--EILA--KGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDV 559

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           +TYNT   +YA       A  ++  M  +  +PN+ T   ++ GYCK    +DA++F+  
Sbjct: 560 ITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAIKFISS 619

Query: 231 MKELEVH 237
           + EL+ H
Sbjct: 620 LHELDPH 626



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/192 (21%), Positives = 78/192 (40%), Gaps = 36/192 (18%)

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           + I++     G +     + +++ K G EPD++ ++ L    V  G  ++A  +   M +
Sbjct: 2   AVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEE 61

Query: 339 YGVHPNVVMFTTV-------------ISGWCNAVK-----------------------MQ 362
            G  P ++ +  +             I+G    +K                        +
Sbjct: 62  EGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYE 121

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A +++E M  +G  P+  TY TLL  YG++++   A E+L+ ME  G  P   T   + 
Sbjct: 122 EAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLI 181

Query: 423 DSWRAIGLAREA 434
            ++   GL  EA
Sbjct: 182 SAYARDGLLEEA 193


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 213/439 (48%), Gaps = 3/439 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG    A  +F  L  +G  PTL TY  L+    +  +F+ +  L++++   G+  +  +
Sbjct: 253 KGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKV 312

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           FN++I+A  + G VD+A ++ + M + GC+P  +TYN LI    + G+ +E+ + L+  +
Sbjct: 313 FNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLE-RA 371

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +++ + PN  +Y  L+ A+C +     A ++++K+  +G +PD V+Y          GE 
Sbjct: 372 KERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEI 431

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A  +  +M    V P+ +   +++SG CK+G    A   L  M +L + P+  ++ +L
Sbjct: 432 DVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATL 491

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + GF+   + D   +   ++   G+ P VV ++ ++      G M       + M  A  
Sbjct: 492 VDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANH 551

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD +  S +  GYV+  +   A  +   M K    PNVV +T++I+G+C    M RA  
Sbjct: 552 APDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEK 611

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           ++  M    + PN+ TY  L+ G+ +  +P +A    ++M      P  +T   + +   
Sbjct: 612 VFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLT 671

Query: 427 AIGLAREAKRVLKSAEEDR 445
            I        + K+ E DR
Sbjct: 672 NI--TNTTLLIEKNEENDR 688



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 183/414 (44%), Gaps = 19/414 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N     G+  EA        E    P   +YT L+ A  +Q  +     ++ K+ + G 
Sbjct: 352 INFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGD 411

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK-PEESL 119
           KPD + + A I+     G +D A+ + +KM + G  P    YN L+ G    G+ P   L
Sbjct: 412 KPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKL 471

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            L +++  D N++P+   Y  LV  +   N +++A  +   +++ GI P  V YN + + 
Sbjct: 472 LLSEML--DLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKG 529

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G+   A   + +M+     P+E T   ++ GY K+ +++ A++   +M + +  PN
Sbjct: 530 LCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPN 589

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +V + SLI GF  I D    +K    M+ F ++P+VVT++ ++  +S  G   K    F+
Sbjct: 590 VVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFE 649

Query: 300 DMVKAGIEPDIHVFSILAKG---------YVRAGEPQKAESIL---TSMRKYGVHPNVVM 347
            M+     P+   F  L  G          +   E      IL    +M   G    +  
Sbjct: 650 LMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIAT 709

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY---GEAKQPWR 398
           + ++I   C    +  A  +  KM   G   +   +  LL G    G++K+ WR
Sbjct: 710 YNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSKE-WR 762



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/406 (23%), Positives = 191/406 (47%), Gaps = 14/406 (3%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           + Y++L+  + + + F  I  ++  ++    KP     N++I   +E G VD+A+K+F  
Sbjct: 94  VAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYM 153

Query: 90  MKD-SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM-----SQDKNVKPNDRTYNILVR 143
           + +   C P     N+L+      GK + + +L   M         ++  ++ +  I+V+
Sbjct: 154 VCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVK 213

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C    +EE   ++     +G  P+ V YN +   Y + G+  RA ++  E++     P
Sbjct: 214 GLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLP 273

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG-VDKA 262
              T G ++ G+CK G  +   + L  M  + ++ N+ VFNS+I    D K   G VDKA
Sbjct: 274 TLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSII----DAKYKYGLVDKA 329

Query: 263 ---LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
              + +M E G +PD+ T++ +++   S G + + +E  +   +  + P+   ++ L   
Sbjct: 330 AEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHA 389

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y + G+   A  +L  + + G  P++V +   I G     ++  A+ + EKM E G+ P+
Sbjct: 390 YCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPD 449

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            + Y  L+ G  +  +   A+ LL  M +  ++P       + D +
Sbjct: 450 AQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGF 495



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 154/359 (42%), Gaps = 6/359 (1%)

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           + + MK+   KPT    N++I  Y   G  ++++K+  ++ +  N  P     N L+   
Sbjct: 115 VLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNSLLNCL 174

Query: 146 CSKNSIEEAWNVVYKMVASG------IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
                ++ A  +  KM+  G      +  D  +   + +     G+     +++ +   N
Sbjct: 175 VKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGN 234

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              PN     +I+ GYCK+G+++ A R    +K     P L  + +LI GF        V
Sbjct: 235 GCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVV 294

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
           D+ L  M   G+  +V  F++I+DA    GL+ K  E+   M + G EPDI  ++IL   
Sbjct: 295 DQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINF 354

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
               G  ++AE  L   ++  + PN   +T ++  +C       A  +  K+ E G  P+
Sbjct: 355 SCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPD 414

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           L +Y   + G     +   A  + + M EKGV P      ++       G    AK +L
Sbjct: 415 LVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLL 473



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/279 (20%), Positives = 114/279 (40%), Gaps = 40/279 (14%)

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           V Y++L +   +Y      E +L +M+N   +P       ++  Y + G ++ A++  Y 
Sbjct: 94  VAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYM 153

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
           + EL                                  +   P VV  +++++     G 
Sbjct: 154 VCEL----------------------------------YNCFPCVVANNSLLNCLVKNGK 179

Query: 291 MGKCQEIFDDMVKAG------IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           +    E++D M++ G      +  D +   I+ KG    G+ ++   ++      G  PN
Sbjct: 180 VDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPN 239

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
           VV +  +I G+C    ++RA  ++E++   G  P L+TY  L+ G+ +A +    ++LL 
Sbjct: 240 VVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLN 299

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            M   G+         + D+    GL  +A  +++   E
Sbjct: 300 EMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTE 338


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 217/444 (48%), Gaps = 20/444 (4%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           F  L + G  PTL+T+ TL+  L  + R    L L  ++     KP+ + F  ++N    
Sbjct: 38  FGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCR 93

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
            G V EA+ +  +M + G +P   TY T++ G   +G    +L LL+ M +  ++KP+  
Sbjct: 94  EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVV 153

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
            Y+ ++          +A N+  +M   GI PD VTY+ +   +   G+   A+++L EM
Sbjct: 154 IYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEM 213

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD---I 253
              ++ P+  T   +++   KEG++  A   L  M    V PN+V  N+L+ G  D   +
Sbjct: 214 LVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKL 273

Query: 254 KDSDGVDKAL--TLME-----EF-GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           KD+  + KA+  ++M+      F GV+PDV T++ ++    + G   + +E++++M   G
Sbjct: 274 KDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 333

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           I PD   +S +  G  +     +A  +  SM      PN+V F T+I+G+C A  +   +
Sbjct: 334 IVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGL 393

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ-LVADS 424
            ++ +M   GI  N  TY TL+ G+ +      + ++ Q M   GV P   TI+ ++   
Sbjct: 394 ELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGL 453

Query: 425 WRAIGLAREAKRVLKSAEEDRQSM 448
           W       E KR L   EE + SM
Sbjct: 454 WS----KEELKRALAMLEELQMSM 473



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 194/411 (47%), Gaps = 17/411 (4%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           ++  L+       +    LS   K+ K G  P  + FN +++       V EA+ +F +M
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
               CKP   T+ TL+ G    G+  E++ LL  M +D  ++PN  TY  +V   C    
Sbjct: 77  ----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVED-GLQPNQITYGTIVDGMCKMGD 131

Query: 151 IEEAWNVVYKM-VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
              A N++ KM   S I+PD V Y+ +     + G    A+ +  EMQ+  + P+  T  
Sbjct: 132 TVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYS 191

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            +++G+C  G   +A R L  M   ++ P++V F+ LI   +   D +     L  M   
Sbjct: 192 CMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISS 251

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA-----------GIEPDIHVFSILAK 318
           GV P+VVT +T++D    +G +    E+F  M K+           G+EPD+  ++IL  
Sbjct: 252 GVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILIS 311

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           G +  G+  +AE +   M   G+ P+ V ++++I+G C   ++  A  +++ M     +P
Sbjct: 312 GLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSP 371

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           N+ T+ TL+ GY +A       EL   M  +G+     T   +   +R +G
Sbjct: 372 NIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVG 422



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 204/386 (52%), Gaps = 19/386 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK-DG 59
           MN L  +G+  EA  + + ++E+G +P  ITY T+V  + +     S L+L+ K+E+   
Sbjct: 88  MNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSH 147

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +KPD ++++A+I+   + G   +A  +F +M+D G  P   TY+ +I G+ + GK  E+ 
Sbjct: 148 IKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQ 207

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +LLQ M   K + P+  T++ L+ A   +  +  A +++ +M++SG+ P+ VT NTL   
Sbjct: 208 RLLQEMLVRK-ISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDG 266

Query: 180 YAQYGETYRAEQMLFEMQN-----------NQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
               G+   A +M   MQ            N V P+ +T  I++SG   EG   +A    
Sbjct: 267 LCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELY 326

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAW 285
             M    + P+ V ++S+I G    K S  +D+A  + +  G K   P++VTF+T++  +
Sbjct: 327 EEMPHRGIVPDTVTYSSMINGL--CKQSR-LDEATQMFDSMGSKSFSPNIVTFNTLITGY 383

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
             AG++    E+F +M + GI  +   +  L +G+ + G    +  I   M   GV+P+ 
Sbjct: 384 CKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDT 443

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKM 371
           +    +++G  +  +++RA+++ E++
Sbjct: 444 ITIRNMLTGLWSKEELKRALAMLEEL 469



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 168/358 (46%), Gaps = 50/358 (13%)

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR------------------ 178
           ++NIL++ +CS + +  A +   K+   G  P  VT+NTL                    
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76

Query: 179 -------------AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
                           + G    A  +L  M  + ++PN+ T G IV G CK G+   A+
Sbjct: 77  CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 136

Query: 226 RFLYRMKEL-EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
             L +M+EL  + P++V+++++I G                M++ G+ PD+VT+S +++ 
Sbjct: 137 NLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMING 196

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           + S+G   + Q +  +M+   I PD+  FS L    V+ G+   A+ +L  M   GV PN
Sbjct: 197 FCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPN 256

Query: 345 VVMFTTVISGWCNAVKMQRAMSIY----EKMCEI-------GINPNLKTYETLLWGYGEA 393
           VV   T++ G C++ K++ A+ ++    + M +I       G+ P+++TY  L+ G    
Sbjct: 257 VVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINE 316

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
            +   AEEL + M  +G+ P   T   + +     GL ++++  L  A +   SM +K
Sbjct: 317 GKFLEAEELYEEMPHRGIVPDTVTYSSMIN-----GLCKQSR--LDEATQMFDSMGSK 367



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 136/285 (47%), Gaps = 15/285 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N     GK  EA  +   ++     P ++T++ L+ AL ++    S   L+ ++   G+
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGV 253

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDS-----------GCKPTTSTYNTLIKGY 109
            P+ +  N +++   +SG + +A+++F+ M+ S           G +P   TYN LI G 
Sbjct: 254 CPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGL 313

Query: 110 GNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
            N GK  E+ +L + M   + + P+  TY+ ++   C ++ ++EA  +   M +    P+
Sbjct: 314 INEGKFLEAEELYEEMPH-RGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPN 372

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
            VT+NTL   Y + G      ++  EM    +  N  T   ++ G+ K GN+  ++    
Sbjct: 373 IVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQ 432

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
            M    V+P+ +   +++ G    ++   + +AL ++EE  +  D
Sbjct: 433 EMISSGVYPDTITIRNMLTGLWSKEE---LKRALAMLEELQMSMD 474



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 4/145 (2%)

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           I  DI+ F+IL K +    +   A S    + K G HP +V F T++ G C   ++  A+
Sbjct: 11  IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            ++ +MC+    PN+ T+ TL+ G     +   A  LL  M E G++P + T   + D  
Sbjct: 71  DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126

Query: 426 RAIGLAREAKRVLKSAEEDRQSMPN 450
             +G    A  +L+  EE     P+
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPD 151



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 67/133 (50%), Gaps = 2/133 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  + +  EA  +F+ +  +   P ++T+ TL+    +       L L  ++ + G+
Sbjct: 345 INGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGI 404

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             ++I +  +I    + GN++ ++ IFQ+M  SG  P T T   ++ G  +  + + +L 
Sbjct: 405 VANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALA 464

Query: 121 LLQ--LMSQDKNV 131
           +L+   MS D ++
Sbjct: 465 MLEELQMSMDHHL 477


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 122/492 (24%), Positives = 225/492 (45%), Gaps = 54/492 (10%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++IL  +GK  EA+ +   +I+ G    ++TY+TL+  L  + R      L   ++K G 
Sbjct: 198 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGC 257

Query: 61  KPDSILFNAMINACSESGNV---------------------------------------- 80
           +PD+I +  ++    ++GN+                                        
Sbjct: 258 RPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 317

Query: 81  -DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
            DEA ++F++MK  G  P   +Y TLI G+   GK E++  L   M  D  ++P+  T +
Sbjct: 318 EDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEM-LDVGIQPDVTTSS 376

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           +L+   C K  + EA  ++  ++  G  PD VT  TL +         +A Q+  +MQ  
Sbjct: 377 VLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKL 436

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE------LEVHPNLVVFNSLIKGFLDI 253
              PN  TC  ++ G C+ GN++ A+     M        +   PN + ++ +I G    
Sbjct: 437 GCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKC 496

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
              D   +    M+  GV PDV+++++++  +  +G     + +F++MV  G++PD+  F
Sbjct: 497 GREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTF 556

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           S+L     + G+  +A  +L  M + G  PN V +TT++ G C   ++  A  ++ KM +
Sbjct: 557 SVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQK 616

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELL-QVMEEKG-----VRPKKSTIQLVADSWRA 427
           +G  P++ TY TL+ G  +      A EL  +++ + G      +P   +  ++ D    
Sbjct: 617 LGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCK 676

Query: 428 IGLAREAKRVLK 439
            G   EA+ + K
Sbjct: 677 HGREDEARELFK 688



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 205/414 (49%), Gaps = 19/414 (4%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  +FN +++ G +P + T + L+  L ++ +      L+  V + G  PD +  
Sbjct: 351 GKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTC 410

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             ++        + +A ++F KM+  GC P   T  TL+KG    G  + +L+L + M  
Sbjct: 411 TTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLS 470

Query: 128 DK-----NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           D      N KPN  +Y+I++   C     +EA  +  +M A G+ PD ++Y +L   + +
Sbjct: 471 DTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCR 530

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+   A+ +  EM +  V+P+  T  +++   CKEG + +A   L  M +    PN V 
Sbjct: 531 SGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVT 590

Query: 243 FNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           + +L+KG      +D + +A  L   M++ G  PDVVT+ T+M      G +    E+  
Sbjct: 591 YTTLVKGLCM---NDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHK 647

Query: 300 DMVK------AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
            M+          +PD+  +SI+  G  + G   +A  +   M+  GV PNV+ +T++I 
Sbjct: 648 KMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIH 707

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           G+C + K++ A  ++ +M + G+  N  TY  ++ G+ +  Q  +A  L Q ME
Sbjct: 708 GFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKME 759



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 207/421 (49%), Gaps = 11/421 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  +FN +++ G R  + T + L+  L ++ +      L+  + + G   D + +
Sbjct: 170 GKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTY 229

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +I        + EA ++F  M+  GC+P    Y TL+KG    G    +L+L Q M  
Sbjct: 230 STLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLN 289

Query: 128 DKN-----VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           D        KP   +Y+I++   C     +EA  +  +M A GI PD ++Y TL   +  
Sbjct: 290 DTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCL 349

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+  +A+ +  EM +  ++P+  T  +++   CK+G + +A + L  + +    P++V 
Sbjct: 350 SGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVT 409

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
             +L+KG           +    M++ G  P+VVT +T+M     +G +    E+  +M+
Sbjct: 410 CTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNML 469

Query: 303 KA----GI--EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
                 GI  +P+   +SI+  G  + G   +A  +   M+  GV P+V+ +T++I G+C
Sbjct: 470 SDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFC 529

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
            + K + A  ++ +M +IG+ P++ T+  L+    +  +   A ELL+VM ++G  P   
Sbjct: 530 RSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTV 589

Query: 417 T 417
           T
Sbjct: 590 T 590



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 195/400 (48%), Gaps = 13/400 (3%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +PTL++Y+ ++  L + +R      L  +++  GM PD I + ++I+    SG  ++A  
Sbjct: 118 KPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKC 177

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +F +M D G +   +T + LI      GK  E+ +LL++M Q +    +  TY+ L++  
Sbjct: 178 LFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQ-RGCILDIVTYSTLIKGL 236

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN------ 199
           C K+ I EA  +   M   G +PDA+ Y TL +   Q G    A Q+  EM N+      
Sbjct: 237 CMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGI 296

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           + +P   +  II+ G CK+   ++A      MK   + P+++ + +LI GF      +  
Sbjct: 297 KCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKA 356

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
                 M + G++PDV T S ++D     G + +  ++ + +++ G  PD+   + L KG
Sbjct: 357 KCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKG 416

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE----IG 375
                   KA  +   M+K G  PNVV   T++ G C +  ++ A+ +++ M       G
Sbjct: 417 LCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYG 476

Query: 376 IN--PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           IN  PN  +Y  ++ G  +  +   A EL + M+  GV P
Sbjct: 477 INCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIP 516



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 199/434 (45%), Gaps = 48/434 (11%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +PTLI+Y+ ++  L + +R      L  +++  G+ PD I +  +I+    SG  ++A  
Sbjct: 299 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 358

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +F +M D G +P  +T + LI      GK  E+ KLL+++ Q +   P+  T   LV+  
Sbjct: 359 LFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQ-RGCIPDVVTCTTLVKGL 417

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN------ 199
           C K+ I +A  +  KM   G  P+ VT  TL +   Q G    A ++   M ++      
Sbjct: 418 CMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGI 477

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
             +PN  +  II+ G CK G  ++A      MK L V P+++ + SLI GF         
Sbjct: 478 NCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDA 537

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
                 M + GV+PDV TFS ++D     G + +  E+ + M++ G  P+   ++ L KG
Sbjct: 538 KYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKG 597

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM-------- 371
                   +A  +   M+K G  P+VV + T++ G C    ++ A+ +++KM        
Sbjct: 598 LCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYG 657

Query: 372 -----------------CE----------------IGINPNLKTYETLLWGYGEAKQPWR 398
                            C+                +G+ PN+ +Y +L+ G+  + +   
Sbjct: 658 TNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLED 717

Query: 399 AEELLQVMEEKGVR 412
           A+ L   M ++GV+
Sbjct: 718 AKHLFNEMVDQGVQ 731



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/492 (22%), Positives = 221/492 (44%), Gaps = 54/492 (10%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++   +GK  EA+ +   +++ G    ++TY+TL+  L  + R      L   ++K G 
Sbjct: 17  IDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGC 76

Query: 61  KPDSILFNAMINACSESGNV---------------------------------------- 80
           +PD+I +  ++    ++G +                                        
Sbjct: 77  RPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRR 136

Query: 81  -DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
            DEA ++F++MK  G  P   +Y +LI G+   GK E++  L   M  D  ++ +  T +
Sbjct: 137 EDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEM-LDVGIRSDVTTSS 195

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           +L+   C +  + EA  ++  M+  G   D VTY+TL +          A ++   MQ  
Sbjct: 196 MLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKL 255

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE------LEVHPNLVVFNSLIKGFLDI 253
             RP+    G ++ G C+ GN+  A++    M        ++  P L+ ++ +I G    
Sbjct: 256 GCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKD 315

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
           +  D   +    M+  G+ PDV++++T++  +  +G   K + +F++M+  GI+PD+   
Sbjct: 316 RREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTS 375

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           S+L     + G+  +A  +L  + + G  P+VV  TT++ G C   ++ +A  ++ KM +
Sbjct: 376 SVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQK 435

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK------GVRPKKSTIQLVADSWRA 427
           +G  PN+ T  TL+ G  ++     A EL + M           +P   +  ++ D    
Sbjct: 436 LGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCK 495

Query: 428 IGLAREAKRVLK 439
            G   EA+ + K
Sbjct: 496 CGREDEARELFK 507



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 196/405 (48%), Gaps = 11/405 (2%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G +P + T   L+    ++ +      L+  + + G   D + ++ +I        
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN-----VKPN 134
           + EA ++F  MK  GC+P    Y TL+KG    GK   +L L Q M  D +      KP 
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
             +Y+I++   C     +EA  +  +M A G+ PD ++Y +L   + + G+  +A+ +  
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           EM +  +R +  T  +++   CKEG + +A   L  M +     ++V +++LIKG     
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC----QEIFDDMVKAGI--EP 308
                 +    M++ G +PD + + T+M      G +       QE+ +D  + GI  +P
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
            +  +SI+  G  +     +A  +   M+  G+ P+V+ +TT+I G+C + K ++A  ++
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 360

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            +M ++GI P++ T   L+    +  +   A +LL+V+ ++G  P
Sbjct: 361 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIP 405



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 30/225 (13%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L  +GK  EA+ +   +I+ G  P  +TYTTLV  L    R      L  K++K G 
Sbjct: 560 IDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGC 619

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + +  ++    ++GN+  A+++ +KM        T  Y T                
Sbjct: 620 LPDVVTYGTLMKGLCQTGNIKTALELHKKMLSD-----TGQYGT---------------- 658

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
                    N KP+  +Y+I++   C     +EA  +  +M A G+ P+ ++Y +L   +
Sbjct: 659 ---------NFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGF 709

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
            + G+   A+ +  EM +  V+ N  T  +++ G+CKEG ++ A+
Sbjct: 710 CRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 215/427 (50%), Gaps = 6/427 (1%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  +A  +F  +++    P++  +  L++A+ + K+F  ++SL  K+++ G+  +   +N
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +IN       +  A+ +  KM   G +P+  T ++L+ GY +  +  +++ L+  M + 
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE- 183

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
              +P+  T+  L+      N   EA  +V +MV  G QP+ VTY  +     + G+   
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  +L +M+  ++  N      ++   CK  + +DA+     M+   V PN++ ++SLI 
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
              + +      + L+ M E  + P+VVTF+ ++DA+   G + + ++++D+M+K  I+P
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           DI  +S L  G+       +A+ +   M      PNVV + T+I+G+C A ++   + ++
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            +M + G+  N  TY TL+ G+ +A+    A+ + + M   GV P   T   + D     
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD----- 478

Query: 429 GLAREAK 435
           GL +  K
Sbjct: 479 GLCKNGK 485



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 218/456 (47%), Gaps = 36/456 (7%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G    L TY  L+    R+ +    L+L+ K+ K G +P  +  ++++N       + +A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +  +M + G +P T T+ TLI G     K  E++ L+  M Q +  +PN  TY ++V 
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQPNLVTYGVVVN 233

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C +  I+ A+N++ KM A+ I+ + V Y+T+  +  +Y     A  +  EM+N  VRP
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD----------- 252
           N  T   ++S  C      DA R L  M E +++PN+V FN+LI  F+            
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353

Query: 253 ---IKDS------------------DGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSA 288
              IK S                  D +D+A  + E    K   P+VVT++T+++ +  A
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
             + +  E+F +M + G+  +   ++ L  G+ +A +   A+ +   M   GVHPN++ +
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
            T++ G C   K+++AM ++E +    + P + TY  ++ G  +A +     +L   +  
Sbjct: 474 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 533

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           KGV+P       +   +   GL  EA  + +   ED
Sbjct: 534 KGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 197/398 (49%), Gaps = 1/398 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++E G+RP  IT+TTL+  L    +    ++L+ ++ + G +P+ + +  ++N   + G+
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D A  +  KM+ +  +     Y+T+I         +++L L   M ++K V+PN  TY+
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYS 299

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+   C+     +A  ++  M+   I P+ VT+N L  A+ + G+   AE++  EM   
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            + P+  T   +++G+C    +++A      M   +  PN+V +N+LI GF   K  D  
Sbjct: 360 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG 419

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            +    M + G+  + VT++T++  +  A      Q +F  MV  G+ P+I  ++ L  G
Sbjct: 420 VELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 479

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             + G+ +KA  +   +++  + P +  +  +I G C A K++    ++  +   G+ P+
Sbjct: 480 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           +  Y T++ G+        A+ L + M E G  P   T
Sbjct: 540 VIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 103/196 (52%), Gaps = 1/196 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA ++F  +I +   P ++TY TL+    + KR    + L  ++ + G+  +++ +  +I
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   ++ + D A  +F++M   G  P   TYNTL+ G    GK E+++ + + + + K +
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK-M 501

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +P   TYNI++   C    +E+ W++   +   G++PD + YNT+   + + G    A+ 
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561

Query: 192 MLFEMQNNQVRPNERT 207
           +  +M+ +   P+  T
Sbjct: 562 LFRKMREDGPLPDSGT 577



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 108/233 (46%), Gaps = 1/233 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++  V +GK  EA  +++ +I+    P + TY++L+       R      +   +     
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +N +IN   ++  +DE +++F++M   G    T TY TLI G+      + +  
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M  D  V PN  TYN L+   C    +E+A  V   +  S ++P   TYN +    
Sbjct: 457 VFKQMVSD-GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
            + G+      +   +    V+P+      ++SG+C++G  E+A     +M+E
Sbjct: 516 CKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 48/98 (48%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK  +A  +F  L      PT+ TY  ++  + +  + +    L   +   G+KPD
Sbjct: 480 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTST 101
            I++N MI+     G  +EA  +F+KM++ G  P + T
Sbjct: 540 VIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/500 (25%), Positives = 224/500 (44%), Gaps = 72/500 (14%)

Query: 33  TTLVAALTRQKRFKSILSLISKVEKD-GMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           T+LV A  R+        +  K+ K+   +P+S+ ++ +I+   E+G ++EA ++ Q+M 
Sbjct: 167 TSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMV 226

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
           + GC+P+T TY  LIK   ++G  ++++K+L  M+  K   PN  TY IL+   C +  I
Sbjct: 227 EKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMAT-KACVPNVHTYTILIDRLCREGKI 285

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT---- 207
           EEA  V  KM+  G+ P  +T+N L   Y + G    A Q+L  M+    +PN RT    
Sbjct: 286 EEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNEL 345

Query: 208 ----C---------------------------GIIVSGYCKEGNMEDAMRFLYRMKELEV 236
               C                            I+V G+CKEG +  A      M    +
Sbjct: 346 MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGL 405

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P+   F +LI G   +   +  +  L  M + G+  D VTF+ ++D     G       
Sbjct: 406 EPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCF 465

Query: 297 IFDDMV-----------------------------------KAGIEPDIHVFSILAKGYV 321
           +F++MV                                   K G+ P +   +IL +G+ 
Sbjct: 466 LFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHC 525

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           RAGE   +  +L  M++ G  PNV  +T +I+G CN  +++ A +I   M   G++PN  
Sbjct: 526 RAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHF 585

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY  L+  + +A +  RA +++  M + G +P       +   +     A  A+ +  + 
Sbjct: 586 TYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTG 645

Query: 442 EEDRQSMPNKKDEIAVESIH 461
           + D +S+ +++++    S H
Sbjct: 646 DLDARSLSSEENDNNCLSSH 665



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 215/464 (46%), Gaps = 37/464 (7%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  ++  ++ EG     I Y T+V AL +    ++      KV + G   D+ +  +++ 
Sbjct: 112 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 171

Query: 73  ACSESGNVDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           A     ++ EA ++F+KM K+  C+P + TY+ LI G    G+ EE+ +L Q M + K  
Sbjct: 172 ANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVE-KGC 230

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +P+ RTY +L++A C     ++A  ++ +M      P+  TY  L     + G+   A  
Sbjct: 231 QPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANG 290

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  +M  + + P   T   +++GYCKEG +  A + L  M++    PN+  +N L++G  
Sbjct: 291 VFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 350

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
            +  S      L  + + G+ PD VT++ ++D +   G +     IF+ M  AG+EPD  
Sbjct: 351 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 410

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            F+ L  G  + G  ++A  IL SM K G+  + V FT +I G C   K +    ++E M
Sbjct: 411 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 470

Query: 372 CE-----------------------------------IGINPNLKTYETLLWGYGEAKQP 396
            E                                    G+ P++ T+  L+ G+  A + 
Sbjct: 471 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 530

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
             + ++L+ M++ G  P   T  ++ +     G   EA+ +L S
Sbjct: 531 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFS 574



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/408 (24%), Positives = 195/408 (47%), Gaps = 11/408 (2%)

Query: 20  LIEEGH-RPTLITYTTLVAALTR-QKRFKSILSLISKVEKDGMKPDSILFNAMINACSES 77
           ++E+G+ +P + TY  L+  L R  K +K+ L L+ +V  +G+ PD + +N +++   + 
Sbjct: 329 VMEKGNCKPNIRTYNELMEGLCRVSKSYKAFL-LLRRVVDNGLLPDRVTYNILVDGFCKE 387

Query: 78  GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT 137
           G ++ A  IF  M  +G +P   T+  LI G   +G+ E++  +L  M + K +  ++ T
Sbjct: 388 GQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVK-KGISLDEVT 446

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           +  L+   C     ++   +   MV +     A T+N    A  +  +   A  ML +M 
Sbjct: 447 FTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMM 506

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
              + P+  T  I++ G+C+ G    +++ L RMK+    PN+  +  +I G  +    +
Sbjct: 507 KYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVE 566

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
             +  L  M  FGV P+  T++ ++ A   AG + +  +I   MVK G +P+ H++S L 
Sbjct: 567 EAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 626

Query: 318 KGYVRAGEPQKAESILTS----MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
            G+V +     A ++ ++     R      N      + S     + +  A+ I +++ +
Sbjct: 627 SGFVLSNTAIGARALSSTGDLDARSLSSEENDN--NCLSSHVFRLMDVDHALKIRDEIKK 684

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            G+ P    Y  L+ G  +  +   A++L Q M + G+ P K+   ++
Sbjct: 685 CGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSII 731



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 173/365 (47%), Gaps = 3/365 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA+ +F  +++ G  P +IT+  L+    ++    S   L+S +EK   KP+
Sbjct: 279 LCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPN 338

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +N ++          +A  + +++ D+G  P   TYN L+ G+   G+   +  +  
Sbjct: 339 IRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFN 398

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M+    ++P+  T+  L+   C    +E+A  ++  MV  GI  D VT+  L   + + 
Sbjct: 399 SMNS-AGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKI 457

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+      +   M  N+      T    +    K+  + +A   L +M +  + P++V  
Sbjct: 458 GKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTH 517

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
             LI+G     ++    K L  M++ G  P+V T++ I++   + G + + + I   M  
Sbjct: 518 TILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSS 577

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC--NAVKM 361
            G+ P+   +++L K +V+AG   +A  I+++M K G  PN  +++ ++SG+   N    
Sbjct: 578 FGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIG 637

Query: 362 QRAMS 366
            RA+S
Sbjct: 638 ARALS 642



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 134/292 (45%), Gaps = 7/292 (2%)

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           Y+ L+      N    A+ V  +MV  G     + Y T+  A  + G    AE    ++ 
Sbjct: 96  YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 155

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM-KELEVHPNLVVFNSLIKGFLDIKDS 256
                 +   C  +V   C+  ++ +A R   +M KE    PN V ++ LI G     ++
Sbjct: 156 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLC---EA 212

Query: 257 DGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
             +++A  L +E    G +P   T++ ++ A    G+  K  ++ D+M      P++H +
Sbjct: 213 GRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTY 272

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           +IL     R G+ ++A  +   M K+G+ P ++ F  +I+G+C    +  A  +   M +
Sbjct: 273 TILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEK 332

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
               PN++TY  L+ G     + ++A  LL+ + + G+ P + T  ++ D +
Sbjct: 333 GNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGF 384



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 124/289 (42%), Gaps = 46/289 (15%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EA  I   +   G  P   TY  LV A  +  R      ++S + K+G 
Sbjct: 556 INGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGC 615

Query: 61  KPDSILFNAMIN------------ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
           +P+S +++A+++            A S +G++D A  +  +  D+ C    S++   +  
Sbjct: 616 QPNSHIYSALLSGFVLSNTAIGARALSSTGDLD-ARSLSSEENDNNC---LSSHVFRLMD 671

Query: 109 YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP 168
             +  K  + +K        K   P +  YN LV   C +  I EA  +   MV  G+ P
Sbjct: 672 VDHALKIRDEIK--------KCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFP 723

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQ---NNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           D      ++     Y +T + +  L  M+   +N+  P+  +   ++ G   EG +++A 
Sbjct: 724 D----KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQ 779

Query: 226 RFLYRM-------KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
           + +  +       +E+EV P++         FL  ++ D  DK L L++
Sbjct: 780 KLVSDLVRHTGIEEEVEVTPSI--------EFLMKEEEDDPDKCLKLIK 820


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/500 (25%), Positives = 224/500 (44%), Gaps = 72/500 (14%)

Query: 33  TTLVAALTRQKRFKSILSLISKVEKD-GMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           T+LV A  R+        +  K+ K+   +P+S+ ++ +I+   E+G ++EA ++ Q+M 
Sbjct: 210 TSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMV 269

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
           + GC+P+T TY  LIK   ++G  ++++K+L  M+  K   PN  TY IL+   C +  I
Sbjct: 270 EKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMAT-KACVPNVHTYTILIDRLCREGKI 328

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT---- 207
           EEA  V  KM+  G+ P  +T+N L   Y + G    A Q+L  M+    +PN RT    
Sbjct: 329 EEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNEL 388

Query: 208 ----C---------------------------GIIVSGYCKEGNMEDAMRFLYRMKELEV 236
               C                            I+V G+CKEG +  A      M    +
Sbjct: 389 MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGL 448

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P+   F +LI G   +   +  +  L  M + G+  D VTF+ ++D     G       
Sbjct: 449 EPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCF 508

Query: 297 IFDDMV-----------------------------------KAGIEPDIHVFSILAKGYV 321
           +F++MV                                   K G+ P +   +IL +G+ 
Sbjct: 509 LFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHC 568

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           RAGE   +  +L  M++ G  PNV  +T +I+G CN  +++ A +I   M   G++PN  
Sbjct: 569 RAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHF 628

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY  L+  + +A +  RA +++  M + G +P       +   +     A  A+ +  + 
Sbjct: 629 TYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTG 688

Query: 442 EEDRQSMPNKKDEIAVESIH 461
           + D +S+ +++++    S H
Sbjct: 689 DLDARSLSSEENDNNCLSSH 708



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 215/464 (46%), Gaps = 37/464 (7%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  ++  ++ EG     I Y T+V AL +    ++      KV + G   D+ +  +++ 
Sbjct: 155 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 214

Query: 73  ACSESGNVDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           A     ++ EA ++F+KM K+  C+P + TY+ LI G    G+ EE+ +L Q M + K  
Sbjct: 215 ANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVE-KGC 273

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +P+ RTY +L++A C     ++A  ++ +M      P+  TY  L     + G+   A  
Sbjct: 274 QPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANG 333

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  +M  + + P   T   +++GYCKEG +  A + L  M++    PN+  +N L++G  
Sbjct: 334 VFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 393

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
            +  S      L  + + G+ PD VT++ ++D +   G +     IF+ M  AG+EPD  
Sbjct: 394 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 453

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            F+ L  G  + G  ++A  IL SM K G+  + V FT +I G C   K +    ++E M
Sbjct: 454 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 513

Query: 372 CE-----------------------------------IGINPNLKTYETLLWGYGEAKQP 396
            E                                    G+ P++ T+  L+ G+  A + 
Sbjct: 514 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 573

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
             + ++L+ M++ G  P   T  ++ +     G   EA+ +L S
Sbjct: 574 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFS 617



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/408 (24%), Positives = 195/408 (47%), Gaps = 11/408 (2%)

Query: 20  LIEEGH-RPTLITYTTLVAALTR-QKRFKSILSLISKVEKDGMKPDSILFNAMINACSES 77
           ++E+G+ +P + TY  L+  L R  K +K+ L L+ +V  +G+ PD + +N +++   + 
Sbjct: 372 VMEKGNCKPNIRTYNELMEGLCRVSKSYKAFL-LLRRVVDNGLLPDRVTYNILVDGFCKE 430

Query: 78  GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT 137
           G ++ A  IF  M  +G +P   T+  LI G   +G+ E++  +L  M + K +  ++ T
Sbjct: 431 GQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVK-KGISLDEVT 489

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           +  L+   C     ++   +   MV +     A T+N    A  +  +   A  ML +M 
Sbjct: 490 FTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMM 549

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
              + P+  T  I++ G+C+ G    +++ L RMK+    PN+  +  +I G  +    +
Sbjct: 550 KYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVE 609

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
             +  L  M  FGV P+  T++ ++ A   AG + +  +I   MVK G +P+ H++S L 
Sbjct: 610 EAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 669

Query: 318 KGYVRAGEPQKAESILTS----MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
            G+V +     A ++ ++     R      N      + S     + +  A+ I +++ +
Sbjct: 670 SGFVLSNTAIGARALSSTGDLDARSLSSEENDN--NCLSSHVFRLMDVDHALKIRDEIKK 727

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            G+ P    Y  L+ G  +  +   A++L Q M + G+ P K+   ++
Sbjct: 728 CGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSII 774



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 173/365 (47%), Gaps = 3/365 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA+ +F  +++ G  P +IT+  L+    ++    S   L+S +EK   KP+
Sbjct: 322 LCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPN 381

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +N ++          +A  + +++ D+G  P   TYN L+ G+   G+   +  +  
Sbjct: 382 IRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFN 441

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M+    ++P+  T+  L+   C    +E+A  ++  MV  GI  D VT+  L   + + 
Sbjct: 442 SMNS-AGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKI 500

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+      +   M  N+      T    +    K+  + +A   L +M +  + P++V  
Sbjct: 501 GKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTH 560

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
             LI+G     ++    K L  M++ G  P+V T++ I++   + G + + + I   M  
Sbjct: 561 TILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSS 620

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC--NAVKM 361
            G+ P+   +++L K +V+AG   +A  I+++M K G  PN  +++ ++SG+   N    
Sbjct: 621 FGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIG 680

Query: 362 QRAMS 366
            RA+S
Sbjct: 681 ARALS 685



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 134/292 (45%), Gaps = 7/292 (2%)

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           Y+ L+      N    A+ V  +MV  G     + Y T+  A  + G    AE    ++ 
Sbjct: 139 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 198

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM-KELEVHPNLVVFNSLIKGFLDIKDS 256
                 +   C  +V   C+  ++ +A R   +M KE    PN V ++ LI G     ++
Sbjct: 199 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLC---EA 255

Query: 257 DGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
             +++A  L +E    G +P   T++ ++ A    G+  K  ++ D+M      P++H +
Sbjct: 256 GRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTY 315

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           +IL     R G+ ++A  +   M K+G+ P ++ F  +I+G+C    +  A  +   M +
Sbjct: 316 TILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEK 375

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
               PN++TY  L+ G     + ++A  LL+ + + G+ P + T  ++ D +
Sbjct: 376 GNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGF 427



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 124/289 (42%), Gaps = 46/289 (15%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EA  I   +   G  P   TY  LV A  +  R      ++S + K+G 
Sbjct: 599 INGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGC 658

Query: 61  KPDSILFNAMIN------------ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
           +P+S +++A+++            A S +G++D A  +  +  D+ C    S++   +  
Sbjct: 659 QPNSHIYSALLSGFVLSNTAIGARALSSTGDLD-ARSLSSEENDNNC---LSSHVFRLMD 714

Query: 109 YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP 168
             +  K  + +K        K   P +  YN LV   C +  I EA  +   MV  G+ P
Sbjct: 715 VDHALKIRDEIK--------KCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFP 766

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQ---NNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           D      ++     Y +T + +  L  M+   +N+  P+  +   ++ G   EG +++A 
Sbjct: 767 D----KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQ 822

Query: 226 RFLYRM-------KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
           + +  +       +E+EV P++         FL  ++ D  DK L L++
Sbjct: 823 KLVSDLVRHTGIEEEVEVTPSI--------EFLMKEEEDDPDKCLKLIK 863


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 213/414 (51%), Gaps = 4/414 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN      +P  A      L++ G  P + T+T+L+       R +  +S+++++ + G+
Sbjct: 113 MNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGI 172

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD +++  +I++  ++G+VD A+ +F +M++ G +P    Y +L+ G  N G+  ++  
Sbjct: 173 KPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADL 232

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M + K +KP+  T+N L+ A+  +  + +A  +  +M+   I P+  TY +L    
Sbjct: 233 LLRGMMKRK-IKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGL 291

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A QM + M+     P+      +++G+CK   +EDAM+  Y M +  +  N 
Sbjct: 292 CMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNT 351

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + + +LI+GF  +   +   +    M   GV P++ T++ ++      G + K   IF+D
Sbjct: 352 ITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFED 411

Query: 301 MVKA---GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           M K    G+ P+I  +++L  G    G+ +KA  +   M+K  +   ++ +T +I G C 
Sbjct: 412 MQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCK 471

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           A K++ A++++  +   G+ PN+ TY T++ G         A  L + M+E GV
Sbjct: 472 AGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 116/472 (24%), Positives = 217/472 (45%), Gaps = 39/472 (8%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSL------------------- 51
           +EA  +F+ ++E    P++I +T L+  + + K+F  +++L                   
Sbjct: 53  NEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLL 112

Query: 52  ----------------ISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGC 95
                           + K+ K G +PD   F ++IN       ++EAM +  +M + G 
Sbjct: 113 MNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGI 172

Query: 96  KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
           KP    Y T+I      G  + +L L   M ++  ++P+   Y  LV   C+     +A 
Sbjct: 173 KPDVVIYTTIIDSLCKNGHVDNALSLFNQM-ENYGIRPDVVMYTSLVNGLCNSGRWRDAD 231

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
            ++  M+   I+PD +T+N L  A+ + G+   A+++  EM    + PN  T   +++G 
Sbjct: 232 LLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGL 291

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C EG +++A +  Y M+     P++V + SLI GF   K  +   K    M + G+  + 
Sbjct: 292 CMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNT 351

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           +T++T++  +   G     QE+F  MV  G+ P+I  +++L       G+  KA  I   
Sbjct: 352 ITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFED 411

Query: 336 MRKY---GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           M+K    GV PN+  +  ++ G C   K+++A+ ++  M +  ++  + TY  ++ G  +
Sbjct: 412 MQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCK 471

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           A +   A  L   +  KGV+P   T   +       GL  EA  + +  +ED
Sbjct: 472 AGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKED 523


>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g19290-like [Cucumis
           sativus]
          Length = 885

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 217/437 (49%), Gaps = 4/437 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG+   A ++ N +IE G +P++ T+ T++ A  ++   +       ++E  G+  ++I+
Sbjct: 305 KGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIV 364

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N MI+   ++ ++ +A  +F++M+     P   T+NTL+ G+   GK E+  +LL+ +S
Sbjct: 365 YNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLS 424

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
               +  +    ++ V   C     +EA  ++  ++  GI P  V +N++  AY   G  
Sbjct: 425 V-SGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLE 483

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            RA      M    + P+  TC  ++    ++G++++A   LY M +       + F  L
Sbjct: 484 ERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVL 543

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + G+  I   +  +     M+  GV PD V F+  ++    +GLM    ++F DM++ G 
Sbjct: 544 LDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGF 603

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+  V++ L  G+ + G+  +A  ++  M K G+ P++     +I G C   +M+ A+ 
Sbjct: 604 VPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIE 663

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
            +  MC +G++P++ TY TL+ GY +A     A++L+  M + G  P  +T  +    + 
Sbjct: 664 TFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYC 723

Query: 427 AIGLAREAKRVLKSAEE 443
            +   R+  R +   EE
Sbjct: 724 TV---RKINRAVMILEE 737



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 175/374 (46%), Gaps = 5/374 (1%)

Query: 18  NCLIEEGHR----PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA 73
           N L EE       P  IT+ TLVA   R  + +    L+  +   G+  DS L +  +  
Sbjct: 382 NLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAG 441

Query: 74  CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP 133
              +G  DEAMK+ + + + G  P+   +N++I  YGN G  E +     +M +   + P
Sbjct: 442 LCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVK-FGLTP 500

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           +  T + L+ +   K S++EAW  +Y M+  G     + +  L   Y + G    AE + 
Sbjct: 501 SSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLW 560

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
            EM+   V P+       ++G C  G M DA      M      PN  V+NSLI GF  +
Sbjct: 561 NEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKV 620

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
              +   K +  M + G+ PD+ T + I+      G M    E F DM + G+ PDI  +
Sbjct: 621 GKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTY 680

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           + L  GY +A +   A+ ++  M   G  P++  +   I G+C   K+ RA+ I E++  
Sbjct: 681 NTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELIS 740

Query: 374 IGINPNLKTYETLL 387
           +GI PN  TY T++
Sbjct: 741 VGIVPNTVTYNTMI 754



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 199/419 (47%), Gaps = 1/419 (0%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           +L+  G       +F  ++ +G  P   T+  L+    R+   +   +L+  + K   +P
Sbjct: 231 LLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEP 290

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D   +N +INA    G    A+ +   M ++GCKP+ +T+ T+I  +   G  E + K  
Sbjct: 291 DVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYF 350

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             + +D  +  N   YNI++  +     I +A  +  +M    I PD +T+NTL   + +
Sbjct: 351 DEI-EDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYR 409

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
           YG+     ++L ++  + +  +   C + V+G C  G  ++AM+ L  + E  + P++V 
Sbjct: 410 YGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVA 469

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           FNS+I  + +    +    A  +M +FG+ P   T S+++ +    G + +      DM+
Sbjct: 470 FNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMI 529

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G       F++L  GY R G    AES+   M+  GV P+ V F   I+G C +  M 
Sbjct: 530 DKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMT 589

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            A  ++  M   G  PN   Y +L+ G+ +  +   A +L++ M ++G+ P   T+ ++
Sbjct: 590 DAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMI 648



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 142/318 (44%), Gaps = 1/318 (0%)

Query: 100 STYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVY 159
           S  +TL++ +       E+L++L  M ++  V PN    +IL R           W +  
Sbjct: 188 SVLDTLMQAFVKSEMHFEALEILSKM-REVGVTPNPSAISILFRLLIRAGDCGAVWKLFG 246

Query: 160 KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEG 219
            +V  G  P+  T+N L   + + G T   E +L  M   +  P+  +  I+++  C +G
Sbjct: 247 DVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKG 306

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
               A+  L  M E    P++  F ++I  F    + +   K    +E+ G+  + + ++
Sbjct: 307 QSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYN 366

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
            ++  +  A  + +   +F++M    I PD   F+ L  G+ R G+ +    +L  +   
Sbjct: 367 IMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVS 426

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
           G+  +  +    ++G C A +   AM + E + E GI P++  + +++  YG A    RA
Sbjct: 427 GLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERA 486

Query: 400 EELLQVMEEKGVRPKKST 417
                +M + G+ P  ST
Sbjct: 487 FYAYGIMVKFGLTPSSST 504



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/326 (22%), Positives = 152/326 (46%), Gaps = 10/326 (3%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRF-KSILSLISKVEKDGMKPDSIL 66
           G    A Y +  +++ G  P+  T ++L+ +L R+    ++ ++L   ++K G    ++ 
Sbjct: 481 GLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDK-GFPVTNMA 539

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F  +++     G V+ A  ++ +MK  G  P    +   I G    G   ++  +   M 
Sbjct: 540 FTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDML 599

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + K   PN+  YN L+  +C    + EA  +V +M   G+ PD  T N +     + G  
Sbjct: 600 R-KGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRM 658

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A +   +M    + P+  T   ++ GYCK  ++  A   + +M +    P+L  +N  
Sbjct: 659 KLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIR 718

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           I G+  ++    +++A+ ++EE    G+ P+ VT++T+++A  +  ++     +   ++K
Sbjct: 719 IHGYCTVRK---INRAVMILEELISVGIVPNTVTYNTMINAVCNV-ILDHAMILTAKLLK 774

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKA 329
               P+    ++L   + + G P+KA
Sbjct: 775 MAFVPNTVTVNVLLSQFCKQGMPEKA 800



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 116/239 (48%), Gaps = 8/239 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G   +A+ +F+ ++ +G  P    Y +L+    +  +    L L+ ++ K G+
Sbjct: 579 INGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGL 638

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG---NVGKPEE 117
            PD    N +I    + G +  A++ F  M   G  P   TYNTLI GY    +VG  ++
Sbjct: 639 LPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADD 698

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
               L +   D   +P+  TYNI +  +C+   I  A  ++ ++++ GI P+ VTYNT+ 
Sbjct: 699 ----LMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMI 754

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
            A       + A  +  ++      PN  T  +++S +CK+G  E A+ +  ++ E+ +
Sbjct: 755 NAVCNVILDH-AMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLSEIHL 812



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 101/218 (46%), Gaps = 2/218 (0%)

Query: 223 DAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIM 282
           +A+  L +M+E+ V PN    + L +  +   D   V K    +   G  P+  TF+ ++
Sbjct: 205 EALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLI 264

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
             +   G     + +   M K   EPD++ ++I+       G+   A  +L  M + G  
Sbjct: 265 LEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCK 324

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           P++  F T+I  +C    ++ A   ++++ ++G++ N   Y  ++ GY +A+   +A  L
Sbjct: 325 PSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLL 384

Query: 403 LQVMEEKGVRPKKSTIQ-LVADSWRAIGLAREAKRVLK 439
            + M  K + P   T   LVA  +R  G   +  R+L+
Sbjct: 385 FEEMRTKDIVPDGITFNTLVAGHYR-YGKEEDGNRLLR 421



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/277 (20%), Positives = 118/277 (42%)

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR 226
           + D    +TL +A+ +    + A ++L +M+   V PN     I+     + G+     +
Sbjct: 184 ESDFSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWK 243

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
               +      PN   FN LI  F     +   +  L +M +F  +PDV +++ +++A  
Sbjct: 244 LFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANC 303

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
             G       + + M++ G +P I  F  +   + + G  + A      +   G+  N +
Sbjct: 304 LKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTI 363

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
           ++  +ISG+  A  + +A  ++E+M    I P+  T+ TL+ G+    +      LL+ +
Sbjct: 364 VYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDL 423

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
              G+    S   +        G   EA ++L++  E
Sbjct: 424 SVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLE 460


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 201/428 (46%), Gaps = 4/428 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG---MKPDSILFNAMINACSESG 78
           E G    +I+Y  L+  L  +KR +  L L+  +  DG     P+ + +  +I+   ++ 
Sbjct: 157 EFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQ 216

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
            VD A  +FQ M D G +P   TY  LI GY + GK +E +++LQ MS    ++P+   Y
Sbjct: 217 MVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMST-HGLQPDCVIY 275

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
            +L+   C      EA N+   ++  GI+P    Y  L   YA  G        L  M  
Sbjct: 276 AVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVR 335

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
           N V P+     I+ + Y K+  +++AM    +M++  + P +V + +LI     +   D 
Sbjct: 336 NGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDD 395

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
                  M   GV PD+  FS+++    +     K +++F +++  GI  +   F+IL  
Sbjct: 396 AVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMC 455

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
              R G   +A+ ++  M +  V P+V+ + T++ G C   ++  A  + + M  IG+ P
Sbjct: 456 NLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKP 515

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           +  TY TLL GY +A++   A  L + M  KG+ P   T   +      IG   EAK + 
Sbjct: 516 DEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELY 575

Query: 439 KSAEEDRQ 446
            +   +R+
Sbjct: 576 LNMINNRR 583



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 102/472 (21%), Positives = 213/472 (45%), Gaps = 37/472 (7%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  +I++G RP   TYT L+       ++K ++ ++ ++   G++PD +++  +++   
Sbjct: 224 VFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLC 283

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           ++G   EA  IF  +   G KP  + Y  L+ GY   G   E    L LM ++  V P+ 
Sbjct: 284 KNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRN-GVSPDH 342

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYK----------------------------------- 160
             +NI+  A+  K  I+EA ++  K                                   
Sbjct: 343 HIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQ 402

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           M+  G+ PD   +++L        +  +AE++ FE+ +  +R N     I++   C+EG 
Sbjct: 403 MINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGR 462

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           + +A R +  M  ++V P+++ +N+L+ G       D   K L +M   G+KPD  T++T
Sbjct: 463 VMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNT 522

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++  +  A  +     +F +M+  G+ P +  ++ +  G  + G   +A+ +  +M    
Sbjct: 523 LLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNR 582

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
              ++  +T +++G C    +  A  +++ +C   +  ++ T   ++    +  +   A 
Sbjct: 583 RKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAM 642

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK 452
           +L   +   G+ P   T +L+A++    G   E   +  SA E+  + PN +
Sbjct: 643 DLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELF-SAMEENGTAPNSR 693



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 201/417 (48%), Gaps = 9/417 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  EA  IF+ LI +G +P +  Y  L+     +     + S +  + ++G+
Sbjct: 279 LDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGV 338

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES-L 119
            PD  +FN M NA ++   +DEAM IF KM+     P    Y  LI     +G+ +++ L
Sbjct: 339 SPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVL 398

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K  Q++++   V P+   ++ LV   C+ +  E+A  + ++++  GI+ +A  +N L   
Sbjct: 399 KFNQMINE--GVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCN 456

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G    A++++  M    VRP+  +   +V G+C  G +++A + L  M  + + P+
Sbjct: 457 LCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPD 516

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
              +N+L+ G+   +    +D A +L  E    G+ P VVT++TI+      G   + +E
Sbjct: 517 EFTYNTLLHGYCKARR---IDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKE 573

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           ++ +M+    + DI+ ++I+  G  R     +A  +  S+    +  ++     +I    
Sbjct: 574 LYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALL 633

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
              + + AM ++  +   G+ P+++TY  +     +       +EL   MEE G  P
Sbjct: 634 KGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAP 690



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 182/372 (48%), Gaps = 5/372 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  +A   FN +I EG  P +  +++LV  L    +++    L  +V   G+
Sbjct: 384 IDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGI 443

Query: 61  KPDSILFN-AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + ++  FN  M N C E G V EA ++   M     +P   +YNTL+ G+   G+ +E+ 
Sbjct: 444 RLNAAFFNILMCNLCRE-GRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAA 502

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           KLL +M     +KP++ TYN L+  +C    I++A+++  +M+  G+ P  VTYNT+   
Sbjct: 503 KLLDVMVS-IGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHG 561

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             Q G    A+++   M NN+ + +  T  II++G C+   +++A +    +   ++  +
Sbjct: 562 LFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLD 621

Query: 240 LVVFNSLIKGFLD-IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           +   N +I   L   +  D +D   T+   +G+ PDV T+  I +     G + +  E+F
Sbjct: 622 IFTINIMIGALLKGGRKEDAMDLFATI-SAYGLVPDVETYRLIAENLIKEGSLEELDELF 680

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
             M + G  P+  + + L +  +  G+  +A   L+ + +          + +IS +  A
Sbjct: 681 SAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSRA 740

Query: 359 VKMQRAMSIYEK 370
              Q A S+ EK
Sbjct: 741 EYQQLAKSLPEK 752



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 83/373 (22%), Positives = 159/373 (42%), Gaps = 43/373 (11%)

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNV---GKPEESLKLLQLMSQDKNV 131
           S S  +D+A+K+F +M       +  T+N L+            E  + L   M ++ +V
Sbjct: 27  SGSLGLDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSV 86

Query: 132 K--PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
           K  P+  TY IL+  +C                             L   +A +G   + 
Sbjct: 87  KVAPSSCTYTILIGCFCRMGR-------------------------LKHGFAAFGLILKT 121

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY-RMKELEVHPNLVVFNSLIK 248
              L    NN V       G ++ G C    +++A   L  RM E     N++ +N L+K
Sbjct: 122 GWSL----NNTV-----IFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLK 172

Query: 249 GFLDIKDSDGVDKALTLMEEFG---VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           G  + K ++   + + +M + G     P+VVT++T++D    A ++ + + +F  M+  G
Sbjct: 173 GLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKG 232

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + P+ H ++ L  GY+  G+ ++   +L  M  +G+ P+ V++  ++   C   +   A 
Sbjct: 233 VRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEAR 292

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           +I++ +   GI P++  Y  LL GY            L +M   GV P      ++ +++
Sbjct: 293 NIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAY 352

Query: 426 RAIGLAREAKRVL 438
               +  EA  + 
Sbjct: 353 AKKAMIDEAMHIF 365


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 203/392 (51%), Gaps = 2/392 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L+ +G+     +Y +L+  L +  + +  L L+ K+E+D ++P+ I ++ +I+   +   
Sbjct: 151 LMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRL 210

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           + +A+++F  +   G       YN+LI G  +VG+  E+ +LL +M +  N+ P+D T+N
Sbjct: 211 IADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVR-GNINPDDYTFN 269

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           ILV A C +  I EA  V   M+  G +PD VTYN L   +        A ++   M   
Sbjct: 270 ILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKR 329

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            + P+     ++++GYCK   +++AM     ++   + PNL  +NSLI G   +     V
Sbjct: 330 GLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCV 389

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            + +  M + G  PD+VT++  +DA+  +    K   +F  +V+ GI PD +++ ++ + 
Sbjct: 390 QELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVEN 448

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           + +  + + AE  L  +  +G  PNV  +T +I+  C       AM++  KM +    P+
Sbjct: 449 FCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPD 508

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
             T+ET++    E  +  +AE+L   M E+G+
Sbjct: 509 AVTFETIIGALQERNETDKAEKLRLEMIERGL 540



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 215/457 (47%), Gaps = 6/457 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           +V  G    A  +F+ L  +G  P++ T T L+     Q       SL+  + K G +P+
Sbjct: 65  IVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPN 124

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + FN +IN    +G V +AM     +   G      +Y +LI G    G+  ++L+LLQ
Sbjct: 125 MVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQ 184

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +D  V+PN  TY+ ++   C    I +A  +   + + GI  D V YN+L       
Sbjct: 185 KMEEDL-VRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSV 243

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A ++L  M    + P++ T  I+V   CKEG + +A      M +    P++V +
Sbjct: 244 GQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTY 303

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+L++GF    +     +    M + G++PDV+ ++ +++ +    ++ +   +F ++  
Sbjct: 304 NALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRC 363

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
             + P++  ++ L  G  + G     + ++  M   G  P++V +   +  +C +   ++
Sbjct: 364 KNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEK 423

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+S++ ++ + GI P+   Y+ ++  + + ++   AEE LQ +   G  P   T  ++ +
Sbjct: 424 AISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMIN 482

Query: 424 SWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESI 460
           +        EA  +L S  +D    P   D +  E+I
Sbjct: 483 ALCKDCSFDEAMTLL-SKMDDNDCPP---DAVTFETI 515



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 185/379 (48%), Gaps = 8/379 (2%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P   +F+ ++ A    G+   A+ +F ++   G  P+ +T   LI  Y +      +  L
Sbjct: 53  PPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSL 112

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           L  + +    +PN  T+N L+  +C    + +A      ++A G   D  +Y +L     
Sbjct: 113 LGTILK-MGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLC 171

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           + G+T  A Q+L +M+ + VRPN  T   ++ G CK+  + DA+R    +    +  ++V
Sbjct: 172 KNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVV 231

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            +NSLI G   +       + LT+M    + PD  TF+ ++DA    G + + Q +F  M
Sbjct: 232 AYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVM 291

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           +K G +PDI  ++ L +G+  +    +A  +   M K G+ P+V+ +  +I+G+C    +
Sbjct: 292 MKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMV 351

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             AM +++++    + PNL TY +L+ G  +  +    +EL+  M ++G  P   T  + 
Sbjct: 352 DEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIF 411

Query: 422 ADSW-------RAIGLARE 433
            D++       +AI L R+
Sbjct: 412 LDAFCKSKPYEKAISLFRQ 430



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 142/278 (51%), Gaps = 6/278 (2%)

Query: 1   MNILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
            NILV     +G+  EA  +F  +++ G +P ++TY  L+              L +++ 
Sbjct: 268 FNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMV 327

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           K G++PD + +N +IN   +   VDEAM +F++++     P  +TYN+LI G   +G+  
Sbjct: 328 KRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMS 387

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
              +L+  M  D+   P+  TYNI + A+C     E+A ++ ++ +  GI PD   Y+ +
Sbjct: 388 CVQELVDEMC-DRGQSPDIVTYNIFLDAFCKSKPYEKAISL-FRQIVQGIWPDFYMYDVI 445

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
              + +  +   AE+ L  +  +   PN RT  I+++  CK+ + ++AM  L +M + + 
Sbjct: 446 VENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDC 505

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
            P+ V F ++I    +  ++D  +K    M E G+  D
Sbjct: 506 PPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVND 543



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 73/166 (43%)

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           P +  F  ++ A    G       +F  +   GI P I   +IL   Y        A S+
Sbjct: 53  PPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSL 112

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           L ++ K G  PN+V F T+I+G+C    + +AM+    +   G   +  +Y +L+ G  +
Sbjct: 113 LGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCK 172

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             Q   A +LLQ MEE  VRP   T   V D      L  +A R+ 
Sbjct: 173 NGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLF 218



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 68/147 (46%)

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F+ M++    P I VF  L    VR G    A S+ + +   G+ P++   T +I+ +C+
Sbjct: 43  FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              +  A S+   + ++G  PN+ T+ TL+ G+       +A      +  KG    + +
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFS 162

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEED 444
              + +     G  R+A ++L+  EED
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEED 189


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 126/493 (25%), Positives = 222/493 (45%), Gaps = 72/493 (14%)

Query: 33  TTLVAALTRQKRFKSILSLISKVEKD-GMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           T+LV A  R+        +  K+ K+   +P+S+ ++ +I+   E+G ++EA ++ Q+M 
Sbjct: 233 TSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMV 292

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
           + GC+P+T TY  LIK   ++G  ++++K+L  M+  K   PN  TY IL+   C +  I
Sbjct: 293 EKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMAT-KACVPNVHTYTILIDRLCREGKI 351

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT---- 207
           EEA  V  KM+  G+ P  +T+N L   Y + G    A Q+L  M+    +PN RT    
Sbjct: 352 EEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNEL 411

Query: 208 ----C---------------------------GIIVSGYCKEGNMEDAMRFLYRMKELEV 236
               C                            I+V G+CKEG +  A      M    +
Sbjct: 412 MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGL 471

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P+   F +LI G   +   +  +  L  M + G+  D VTF+ ++D     G       
Sbjct: 472 EPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCF 531

Query: 297 IFDDMV-----------------------------------KAGIEPDIHVFSILAKGYV 321
           +F++MV                                   K G+ P +   +IL +G+ 
Sbjct: 532 LFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHC 591

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           RAGE   +  +L  M++ G  PNV  +T +I+G CN  +++ A +I   M   G++PN  
Sbjct: 592 RAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHF 651

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY  L+  + +A +  RA +++  M + G +P       +   +     A  A+ +  + 
Sbjct: 652 TYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTG 711

Query: 442 EEDRQSMPNKKDE 454
           + D +S+ +++++
Sbjct: 712 DLDARSLSSEEND 724



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 215/464 (46%), Gaps = 37/464 (7%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  ++  ++ EG     I Y T+V AL +    ++      KV + G   D+ +  +++ 
Sbjct: 178 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 237

Query: 73  ACSESGNVDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           A     ++ EA ++F+KM K+  C+P + TY+ LI G    G+ EE+ +L Q M + K  
Sbjct: 238 ANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVE-KGC 296

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +P+ RTY +L++A C     ++A  ++ +M      P+  TY  L     + G+   A  
Sbjct: 297 QPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANG 356

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  +M  + + P   T   +++GYCKEG +  A + L  M++    PN+  +N L++G  
Sbjct: 357 VFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 416

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
            +  S      L  + + G+ PD VT++ ++D +   G +     IF+ M  AG+EPD  
Sbjct: 417 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 476

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            F+ L  G  + G  ++A  IL SM K G+  + V FT +I G C   K +    ++E M
Sbjct: 477 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 536

Query: 372 CE-----------------------------------IGINPNLKTYETLLWGYGEAKQP 396
            E                                    G+ P++ T+  L+ G+  A + 
Sbjct: 537 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 596

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
             + ++L+ M++ G  P   T  ++ +     G   EA+ +L S
Sbjct: 597 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFS 640



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 101/442 (22%), Positives = 208/442 (47%), Gaps = 27/442 (6%)

Query: 20  LIEEGH-RPTLITYTTLVAALTR-QKRFKSILSLISKVEKDGMKPDSILFNAMINACSES 77
           ++E+G+ +P + TY  L+  L R  K +K+ L L+ +V  +G+ PD + +N +++   + 
Sbjct: 395 VMEKGNCKPNIRTYNELMEGLCRVSKSYKAFL-LLRRVVDNGLLPDRVTYNILVDGFCKE 453

Query: 78  GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT 137
           G ++ A  IF  M  +G +P   T+  LI G   +G+ E++  +L  M + K +  ++ T
Sbjct: 454 GQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVK-KGISLDEVT 512

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           +  L+   C     ++   +   MV +     A T+N    A  +  +   A  ML +M 
Sbjct: 513 FTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMM 572

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
              + P+  T  I++ G+C+ G    +++ L RMK+    PN+  +  +I G  +    +
Sbjct: 573 KYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVE 632

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
             +  L  M  FGV P+  T++ ++ A   AG + +  +I   MVK G +P+ H++S L 
Sbjct: 633 EAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 692

Query: 318 KGYVRAGEPQKAESILTS---------------------MRKYGVHPNVVMFTTVISGWC 356
            G+V +     A ++ ++                     ++K GV P   ++  ++ G C
Sbjct: 693 SGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGV-PTEDLYNFLVVGLC 751

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
              ++  A  + + M + G+ P+ K   +++  Y +  +     E ++++ +    P  +
Sbjct: 752 KEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFA 810

Query: 417 TIQLVADSWRAIGLAREAKRVL 438
           +   V    R  G  +EA++++
Sbjct: 811 SYCWVIHGLRNEGRVQEAQKLV 832



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/439 (22%), Positives = 200/439 (45%), Gaps = 23/439 (5%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA+ +F  +++ G  P +IT+  L+    ++    S   L+S +EK   KP+
Sbjct: 345 LCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPN 404

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +N ++          +A  + +++ D+G  P   TYN L+ G+   G+   +  +  
Sbjct: 405 IRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFN 464

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M+    ++P+  T+  L+   C    +E+A  ++  MV  GI  D VT+  L   + + 
Sbjct: 465 SMNS-AGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKI 523

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+      +   M  N+      T    +    K+  + +A   L +M +  + P++V  
Sbjct: 524 GKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTH 583

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
             LI+G     ++    K L  M++ G  P+V T++ I++   + G + + + I   M  
Sbjct: 584 TILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSS 643

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC--NAVKM 361
            G+ P+   +++L K +V+AG   +A  I+++M K G  PN  +++ ++SG+   N    
Sbjct: 644 FGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIG 703

Query: 362 QRAMS-------------------IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
            RA+S                   +  ++ + G+ P    Y  L+ G  +  +   A++L
Sbjct: 704 ARALSSTGDLDARSLSSEENDNNCLSNEIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQL 762

Query: 403 LQVMEEKGVRPKKSTIQLV 421
            Q M + G+ P K+   ++
Sbjct: 763 TQDMVKHGLFPDKAISSII 781



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 134/292 (45%), Gaps = 7/292 (2%)

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           Y+ L+      N    A+ V  +MV  G     + Y T+  A  + G    AE    ++ 
Sbjct: 162 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 221

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM-KELEVHPNLVVFNSLIKGFLDIKDS 256
                 +   C  +V   C+  ++ +A R   +M KE    PN V ++ LI G     ++
Sbjct: 222 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLC---EA 278

Query: 257 DGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
             +++A  L +E    G +P   T++ ++ A    G+  K  ++ D+M      P++H +
Sbjct: 279 GRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTY 338

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           +IL     R G+ ++A  +   M K+G+ P ++ F  +I+G+C    +  A  +   M +
Sbjct: 339 TILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEK 398

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
               PN++TY  L+ G     + ++A  LL+ + + G+ P + T  ++ D +
Sbjct: 399 GNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGF 450



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 117/289 (40%), Gaps = 62/289 (21%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EA  I   +   G  P   TY  LV A  +  R      ++S + K+G 
Sbjct: 622 INGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGC 681

Query: 61  KPDSILFNAMIN------------ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
           +P+S +++A+++            A S +G++D A  +  +  D+ C         L   
Sbjct: 682 QPNSHIYSALLSGFVLSNTAIGARALSSTGDLD-ARSLSSEENDNNC---------LSNE 731

Query: 109 YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP 168
               G P E L                  YN LV   C +  I EA  +   MV  G+ P
Sbjct: 732 IKKCGVPTEDL------------------YNFLVVGLCKEGRIIEADQLTQDMVKHGLFP 773

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQ---NNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           D      ++     Y +T + +  L  M+   +N+  P+  +   ++ G   EG +++A 
Sbjct: 774 D----KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQ 829

Query: 226 RFLYRM-------KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
           + +  +       +E+EV P++         FL  ++ D  DK L L++
Sbjct: 830 KLVSDLVRHTGIEEEVEVTPSI--------EFLMKEEEDDPDKCLKLIK 870


>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 505

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 217/423 (51%), Gaps = 7/423 (1%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           +EG RPT  TY++++    +    ++ L +  ++ K    PD   FN +I++ +++  V+
Sbjct: 58  KEGGRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVE 117

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           EA  +F  M      P   TY  LI+  G +G+ +  +KL + M+  +  +PN  TY+ +
Sbjct: 118 EACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTA-QGCQPNLFTYHSV 176

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           + A+ S   ++EA ++  +MV  G+QPDAVTYN L  A+ + G+  RA   +     ++ 
Sbjct: 177 MHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFV---GKSRS 233

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
             NE T   ++S   ++G+++  M    +MK   +  N + +  LI+        + V +
Sbjct: 234 FTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQ 293

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
               M +  +K D+VT + ++D  S AG +    E+F DM   G+  D   ++IL  G  
Sbjct: 294 LYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLG 353

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           RAG+   A ++L  M + G  PN++ + T+IS +     +  A  ++ +M E G+ PN+ 
Sbjct: 354 RAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVV 413

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW-RA--IGLAREAKRVL 438
           +Y +L+ G+G+A +   A  L + M+ +G  P   T  L+ D   RA   G A E  R +
Sbjct: 414 SYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREM 473

Query: 439 KSA 441
           + A
Sbjct: 474 RDA 476



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 172/369 (46%), Gaps = 8/369 (2%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
            EA  +F  + +    P + TYT L+ +L    R  +++ L   +   G +P+   ++++
Sbjct: 117 EEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSV 176

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           ++A   +G VDEA  IFQ+M   G +P   TYN LI  +G  G+ E +   +    + ++
Sbjct: 177 MHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFV---GKSRS 233

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
              N+ TYN L+ +   K  I+    +  +M A G+  + +TY  L       G      
Sbjct: 234 F-TNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVW 292

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           Q+  EM +N ++ +  T   ++    K G +E A      MK   ++ + V +N LI G 
Sbjct: 293 QLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGL 352

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
                 D     L  MEE G  P+++T++T++ ++     +     +F +M + G+ P++
Sbjct: 353 GRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNV 412

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             +S L +G+ +AG    A S+   M+  G  PN V +  +I     A +   AM    +
Sbjct: 413 VSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLRE 472

Query: 371 M----CEIG 375
           M    C++G
Sbjct: 473 MRDAGCQMG 481



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/418 (22%), Positives = 183/418 (43%), Gaps = 13/418 (3%)

Query: 110 GNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
           G   + ++  +L++ M +D+  K + + +N L+  +   N +E+A   +      G +P 
Sbjct: 6   GAARRYDDVQRLVESMQKDR-TKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPT 64

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
           A TY+++ + + + G+      M  +M   +  P+  T  I++    K   +E+A     
Sbjct: 65  AYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFG 124

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            M +L V P++  +  LI+    I   D V K    M   G +P++ T+ ++M A+ SAG
Sbjct: 125 DMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAG 184

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
            + +  +IF  MV+ G++PD   ++IL   + + G+ ++A   +   R +    N V + 
Sbjct: 185 RVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSF---TNEVTYN 241

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
           +++S       +Q  M ++ +M   G+  N  TY  L+   G A +     +L   M + 
Sbjct: 242 SLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDN 301

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSAS 469
            ++    TI  V D     G    A  + +  +    +       I +  + R   L A+
Sbjct: 302 DIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAA 361

Query: 470 NSTFLQIPGVVSSEHNGSSAAKIRSQIVLRSDTVW---TATKSLFVNTYGSGVQPMVV 524
            +  L++      E NG +   I    ++ S   W   +A   LF+     GV P VV
Sbjct: 362 GALLLEM------EENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVV 413



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 1/227 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG       +F  +  +G     +TY  L+  L    R + +  L  ++  + +K D + 
Sbjct: 250 KGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVT 309

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            N +++  S++G V+ A ++FQ MK  G    T TYN LI G G  GK + +  LL L  
Sbjct: 310 INNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALL-LEM 368

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++    PN  TYN L+ ++   +++  A  +  +M   G+ P+ V+Y++L   + + G T
Sbjct: 369 EENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRT 428

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
             A  +  EM+     PN  T  +++    + G    AM +L  M++
Sbjct: 429 DAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRD 475



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 93/185 (50%), Gaps = 1/185 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+   A  +F  +  +G     +TY  L+  L R  +  +  +L+ ++E++G 
Sbjct: 314 LDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGC 373

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I +N +I++  +  N+  A ++F +MK+ G  P   +Y++LI+G+G  G+ + ++ 
Sbjct: 374 APNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAIS 433

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M  +    PN  TYN+L+           A   + +M  +G Q   VT + L R  
Sbjct: 434 LFREMKAE-GCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLVRIP 492

Query: 181 AQYGE 185
            QY E
Sbjct: 493 PQYME 497


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 213/437 (48%), Gaps = 7/437 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MNILV  G   +AH +F  +   G  P + T+T  + +  R KR  S L L++ +   G 
Sbjct: 118 MNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGC 177

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + +++ +  ++    E     EA ++F  M   G  P  ST+N L+      G+ +ES +
Sbjct: 178 QLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESER 237

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  + + K +  N  T+NI ++  C K  +  A +++  ++  G+ PD VTYNTL    
Sbjct: 238 LLNKVLK-KGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGL 296

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      AE+ L ++ N  + P+  T   ++ GYCK G +++A + L         P+ 
Sbjct: 297 CKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDE 356

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             + SLI G      +D +D+AL L       G+KP V+ ++ ++      GL+ +  ++
Sbjct: 357 FTYCSLINGLCQ---NDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQM 413

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            ++M + G   DI  ++++  G  + G    A +++      G  P+V  F T+I G+C 
Sbjct: 414 MNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCK 473

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            +KM+  + I  KM   G+ P++ TY ++L G  +A +     E  + M EKG  P K T
Sbjct: 474 QLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKIT 533

Query: 418 IQLVADSWRAIGLAREA 434
             ++ +S    G   EA
Sbjct: 534 YNILTESLCKAGKVNEA 550



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 106/454 (23%), Positives = 203/454 (44%), Gaps = 37/454 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  KG+  E+  + N ++++G    L T+   +  L R+      +S++  V ++G+
Sbjct: 223 LHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGL 282

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + +N +I    ++ NV EA K   K+ + G +P   TYNTLI GY  +G  + + K
Sbjct: 283 TPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEK 342

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +LQ  +  K   P++ TY  L+   C  + I+ A  +    +  G++P  + YN L +  
Sbjct: 343 ILQ-GAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGL 401

Query: 181 AQYGETYRAEQMLFEMQNNQVR-----------------------------------PNE 205
            Q G   +A QM+ EM  N                                      P+ 
Sbjct: 402 CQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDV 461

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   ++ GYCK+  ME  ++ L +M    V P+++ +NS++ G      ++ + +    
Sbjct: 462 FTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFET 521

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M E G  P+ +T++ + ++   AG + +  ++ D+++  GI PD   F+ +  G+   G+
Sbjct: 522 MVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGD 581

Query: 326 PQKAESILTSM-RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
            + A  +   M  +Y V      +  +I+ +   + +     ++ +M   G  P+  TY 
Sbjct: 582 LKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYR 641

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            ++ G+          + L  M EKG  P  +T 
Sbjct: 642 VMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTF 675



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 104/427 (24%), Positives = 203/427 (47%), Gaps = 14/427 (3%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINAC---SESG 78
           E+G + +L+TY  ++  L     F ++ +++++   D    +S+L    I A       G
Sbjct: 33  EDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMD--IDNSLLEGVYIGAMKSYGRKG 90

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
            V EA+ +F++M    C+P+  +YN ++      G  +++ K+   M ++  + P+  T+
Sbjct: 91  KVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRM-KNVGIVPDVYTF 149

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
            I ++++C       A  ++  MV+ G Q +AV Y T+   +  Y E YR E   +E+ N
Sbjct: 150 TIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGF--YEENYRVEA--YELFN 205

Query: 199 NQVR----PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           + +R    P+  T   ++   CK+G ++++ R L ++ +  +  NL  FN  I+G     
Sbjct: 206 DMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKG 265

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
              G    L  +   G+ PDVVT++T++        + + ++    +V  G+EPD   ++
Sbjct: 266 MLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYN 325

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            L  GY + G  Q AE IL      G  P+   + ++I+G C   ++ RA++++      
Sbjct: 326 TLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGK 385

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G+ P +  Y  L+ G  +     +A +++  M E G      T  LV +    +G   +A
Sbjct: 386 GLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDA 445

Query: 435 KRVLKSA 441
             ++  A
Sbjct: 446 NNLMNDA 452



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 139/278 (50%), Gaps = 4/278 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G   +A+ + N  I +G+ P + T+ TL+    +Q + ++ + +++K+   G+
Sbjct: 433 INGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGV 492

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I +N+++N  S++   ++ M+ F+ M + GC P   TYN L +     GK  E+L 
Sbjct: 493 TPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALD 552

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS-GIQPDAVTYNTLARA 179
           L+  +  +K + P+  ++  ++  + +   ++ A+ +  +M     +     TYN +  A
Sbjct: 553 LVDEI-LNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINA 611

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           +A+  + +  E++  EM      P+  T  +++ G+C  GN +   +FL  M E    P+
Sbjct: 612 FAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPS 671

Query: 240 LVVFNSLIKGF-LDIKDSDGVDKALTLMEEFGVKPDVV 276
           L  F  +I    +  +  + VD  +  M   G+ P+VV
Sbjct: 672 LTTFGRVINCLCVQHRVHEAVD-IIHFMVHNGIVPEVV 708



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 143/330 (43%), Gaps = 35/330 (10%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +FN  + +G +PT+I Y  L+  L ++      L +++++ ++G   D   +N +IN   
Sbjct: 378 LFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLC 437

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM---------- 125
           + G V +A  +       G  P   T+NTLI GY    K E ++++L  M          
Sbjct: 438 KMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVI 497

Query: 126 --------------SQD----------KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
                         ++D          K   PN  TYNIL  + C    + EA ++V ++
Sbjct: 498 TYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEI 557

Query: 162 VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM-QNNQVRPNERTCGIIVSGYCKEGN 220
           +  GI PD V++ T+   +A  G+   A Q+   M +  +V     T  I+++ + ++ +
Sbjct: 558 LNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLD 617

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           +    +    M      P+   +  +I GF    ++D   K L  M E G  P + TF  
Sbjct: 618 LHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGR 677

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
           +++       + +  +I   MV  GI P++
Sbjct: 678 VINCLCVQHRVHEAVDIIHFMVHNGIVPEV 707


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 211/434 (48%), Gaps = 5/434 (1%)

Query: 10  PHEAHYIFNCLIEEGHR---PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           P  A  +FN +   G +   P + T+  L++            + + ++ K G++  ++ 
Sbjct: 122 PALAVSMFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVT 181

Query: 67  FNAMINA-CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
           F  ++   C+E    D    + ++M + GC P   +Y TL+KG     K EE+ +L+ +M
Sbjct: 182 FTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMM 241

Query: 126 SQD-KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           ++D  N  PN  +Y  ++  +  +  + +A+ +  KM+  GI P+ VT N++     +  
Sbjct: 242 AEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQ 301

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
              +AE +L +M +  + PN  T   ++ GY   G   +A+R L  M      PN+V ++
Sbjct: 302 AMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYS 361

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            LI             +    M + G KP+  T+ +++  +++ G +     + D MV+ 
Sbjct: 362 MLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQN 421

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+ P  HVF+I    Y + G   +A      M++ G  P++V +TTVI G C   ++  A
Sbjct: 422 GMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDA 481

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           MS + +M + G++P++ T+ TL+ G+    +  +AEEL   M ++G+ P  +T   + D 
Sbjct: 482 MSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDK 541

Query: 425 WRAIGLAREAKRVL 438
               G   EA+++ 
Sbjct: 542 LFKEGKVTEARKLF 555



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 202/428 (47%), Gaps = 6/428 (1%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG--MKPDSILFNAMINACSESGN 79
           E G  P + +YTTL+  L  +K+ +    LI  + +DG    P+ + +  +I+   + G+
Sbjct: 208 ELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGD 267

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V +A  +F KM D G  P   T N++I G   V   +++  +LQ M  D+++ PN  TYN
Sbjct: 268 VGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMI-DEHIMPNCTTYN 326

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+  + S     EA  ++ +M   G +P+ VTY+ L     + G    A ++   M  +
Sbjct: 327 SLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQS 386

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
             +PN  T G ++ GY  EGN+ D       M +  + P   VFN  I  +      D  
Sbjct: 387 GQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEA 446

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
                 M++ G  PD+V ++T++D     G +      F  M+  G+ PDI  F+ L  G
Sbjct: 447 SLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHG 506

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           +   G+ +KAE +   M   G+ PNV  F ++I       K+  A  +++ M   G  PN
Sbjct: 507 FALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPN 566

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE---AKR 436
           + +Y T++ GY  A +     +LL  M   G++P   T   + D   ++GL  +    K 
Sbjct: 567 VVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVVTCKT 626

Query: 437 VLKSAEED 444
           ++ S  ED
Sbjct: 627 LIDSCCED 634



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 168/360 (46%), Gaps = 17/360 (4%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +   +I+E   P   TY +L+       ++   + ++ ++ +DG +P+ + ++ +I
Sbjct: 305 KAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLI 364

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   +SG   EA +IF  M  SG KP  STY +L+ GY   G   +   +  LM Q+  +
Sbjct: 365 DCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQN-GM 423

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +P    +NI + A+C    ++EA     KM   G  PD V Y T+     + G    A  
Sbjct: 424 RPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMS 483

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
              +M ++ + P+  T   ++ G+   G  E A    Y M +  + PN+  FNS+I    
Sbjct: 484 RFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLF 543

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                    K   LM   G KP+VV+++T++  +  AG +G+  ++ DDM+  G++P   
Sbjct: 544 KEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAV 603

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            F+ L  G V                  G+ P+VV   T+I   C   +++  ++++ +M
Sbjct: 604 TFNTLLDGMV----------------SMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREM 647



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 164/341 (48%), Gaps = 11/341 (3%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           +  G+  EA  I   +  +G RP ++TY+ L+  L +         + + + + G KP++
Sbjct: 333 LSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNA 392

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
             + ++++  +  GN+ +   +   M  +G +P    +N  I  Y   G+ +E+      
Sbjct: 393 STYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNK 452

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M Q +   P+   Y  ++   C    +++A +   +M+  G+ PD +T+NTL   +A +G
Sbjct: 453 MQQ-QGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHG 511

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +  +AE++ +EM +  + PN  T   ++    KEG + +A +    M      PN+V +N
Sbjct: 512 KWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYN 571

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL---MGKCQEIFDDM 301
           ++I G+    +   V K L  M   G+KP  VTF+T++D   S GL   +  C+ + D  
Sbjct: 572 TMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVVTCKTLIDSC 631

Query: 302 VKAG-IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
            + G IE  + +F  +       G+  K ++I  +++  GV
Sbjct: 632 CEDGRIEDILTLFREM------LGKADKTDTITENIKLRGV 666



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 150/320 (46%), Gaps = 19/320 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G   EA  IFN +I+ G +P   TY +L+     +     + ++   + ++GM
Sbjct: 364 IDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGM 423

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL- 119
           +P   +FN  I A  + G +DEA   F KM+  G  P    Y T+I G   +G+ ++++ 
Sbjct: 424 RPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMS 483

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +  Q++  D  + P+  T+N L+  +      E+A  + Y+M+  GI P+  T+N++   
Sbjct: 484 RFCQMI--DDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDK 541

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G+   A ++   M     +PN  +   ++ GY   G + + M+ L  M  + + P 
Sbjct: 542 LFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPT 601

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            V FN+L+ G                M   G+KPDVVT  T++D+    G +     +F 
Sbjct: 602 AVTFNTLLDG----------------MVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFR 645

Query: 300 DMVKAGIEPDIHVFSILAKG 319
           +M+    + D    +I  +G
Sbjct: 646 EMLGKADKTDTITENIKLRG 665



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 121/254 (47%), Gaps = 4/254 (1%)

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL-DIKDSDG 258
           +V P+  T GI++S  C  G +      L ++ +  +    V F  L++    + + SD 
Sbjct: 139 KVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDA 198

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG--IEPDIHVFSIL 316
           ++  L  M E G  PDV +++T++    +     +  E+   M + G    P++  ++ +
Sbjct: 199 MNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTV 258

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G+ + G+  KA ++   M  +G+ PNVV   +VI G C    M +A ++ ++M +  I
Sbjct: 259 IHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHI 318

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            PN  TY +L+ GY  + Q   A  +L+ M   G RP   T  ++ D     GL  EA+ 
Sbjct: 319 MPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEARE 378

Query: 437 VLKSAEEDRQSMPN 450
           +  S  +  Q  PN
Sbjct: 379 IFNSMIQSGQK-PN 391


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 213/443 (48%), Gaps = 12/443 (2%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
            F  ++  G  PT+ TY  ++  + ++    +  SL  +++K G+ PD + +N +I+   
Sbjct: 119 FFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYG 178

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G +DE++ +F++MK  GC+P   TYN LI  +        + +  + M +DK++KPN 
Sbjct: 179 KIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREM-KDKDLKPNV 237

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            +Y+ L+ A C +  ++ A      M   G+ P+  TY++L  A  + G    A  +  E
Sbjct: 238 ISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADE 297

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M    V  N  T   ++ G C+EG M +A      M +  V PNL  + +LI G + ++ 
Sbjct: 298 MLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRS 357

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D   +    M E  +KPD++ + TI+    S   + +C+ I  +M ++GI  +  +++ 
Sbjct: 358 MDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTT 417

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L   Y +AG   +A ++L  MR  G    VV F  +I G C    +Q A+  + +M +  
Sbjct: 418 LMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHD 477

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           + PN+  Y  L+ G  +      A++L   M++K + P K     + D     G  +EA 
Sbjct: 478 LQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEA- 536

Query: 436 RVLKSAEEDRQSMPNKKDEIAVE 458
                      +M NK  E+ +E
Sbjct: 537 ----------LNMRNKMMEMGIE 549



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 201/413 (48%), Gaps = 11/413 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P    +  L + L      ++      ++ K  + P +   NA ++  S++G  D +   
Sbjct: 60  PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK--NVKPNDRTYNILVRA 144
           F+ M  +G  PT  TYN +I   G+V K  + L    L  Q K   + P+  TYN L+  
Sbjct: 120 FRDMVGAGIAPTVFTYNIMI---GHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDG 176

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +     ++E+  +  +M   G +PD +TYN L  ++ ++    RA +   EM++  ++PN
Sbjct: 177 YGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPN 236

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             +   ++   CKEG M+ A++F   M  + + PN   ++SLI    + K +  + +A  
Sbjct: 237 VISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDA--NCK-AGNLGEAFM 293

Query: 265 LMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           L +E     V  ++VT++T++D     G+M + +E+F  M KAG+ P++  ++ L  G++
Sbjct: 294 LADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHI 353

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           +     KA  +   MR+  + P+++++ T++ G C+  K++    I  +M E GI  N  
Sbjct: 354 KVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPV 413

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
            Y TL+  Y +A     A  LL+ M + G      T   + D     GL +EA
Sbjct: 414 IYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEA 466



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/454 (25%), Positives = 213/454 (46%), Gaps = 40/454 (8%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NI++G    +G    A  +F  + + G  P ++TY TL+    +       + L  +++ 
Sbjct: 136 NIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKF 195

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G +PD I +NA+IN+  +   +  A + F++MKD   KP   +Y+TLI      G  + 
Sbjct: 196 MGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQM 255

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           ++K    M++   + PN+ TY+ L+ A C   ++ EA+ +  +M+   +  + VTY TL 
Sbjct: 256 AIKFFVDMTR-VGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLL 314

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               + G    AE++   M    V PN +    ++ G+ K  +M+ AM     M+E ++ 
Sbjct: 315 DGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIK 374

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P+++++ +++ G       +     +T M+E G+  + V ++T+MDA+  AG   +   +
Sbjct: 375 PDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINL 434

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC- 356
            ++M   G E  +  F  L  G  + G  Q+A      M  + + PNV ++T +I G C 
Sbjct: 435 LEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCK 494

Query: 357 -----NAVKM-----------------------------QRAMSIYEKMCEIGINPNLKT 382
                +A K+                             Q A+++  KM E+GI  +L  
Sbjct: 495 NNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYA 554

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
           Y +L+WG  +  Q  +A + L  M  KG+ P ++
Sbjct: 555 YTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDET 588



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 91/394 (23%), Positives = 187/394 (47%), Gaps = 9/394 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G    A   F  +   G  P   TY++L+ A  +         L  ++ ++ +
Sbjct: 244 IDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHV 303

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             + + +  +++   E G ++EA ++F+ M  +G  P    Y  LI G+  V   +++++
Sbjct: 304 DLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAME 363

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M ++K++KP+   +  +V   CS++ +EE   ++ +M  SGI  + V Y TL  AY
Sbjct: 364 LFNEM-REKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAY 422

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A  +L EM++        T   ++ G CK G +++A+ +  RM + ++ PN+
Sbjct: 423 FKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNV 482

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            V+ +LI G           K    M++  + PD + ++ ++D     G   +   + + 
Sbjct: 483 AVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNK 542

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M++ GIE D++ ++ L  G  + G+ Q+A   L  M   G+ P+  + T ++        
Sbjct: 543 MMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGN 602

Query: 361 MQRAMSIYEKMCEIGI--------NPNLKTYETL 386
           +  A+ +  ++ E G+         PN++T + L
Sbjct: 603 IDEAIELQNELVEKGLIHGNSNPAVPNIQTRDDL 636



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/432 (23%), Positives = 182/432 (42%), Gaps = 40/432 (9%)

Query: 19  CLIEE----GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINAC 74
           CL EE    G  P +ITY  L+ +  + K          +++   +KP+ I ++ +I+A 
Sbjct: 188 CLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDAL 247

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
            + G +  A+K F  M   G  P   TY++LI      G   E+  L   M Q+ +V  N
Sbjct: 248 CKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQE-HVDLN 306

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
             TY  L+   C +  + EA  +   M  +G+ P+   Y  L   + +     +A ++  
Sbjct: 307 IVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFN 366

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           EM+   ++P+    G IV G C E  +E+    +  MKE  +  N V++ +L+  +    
Sbjct: 367 EMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAG 426

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL------------------------ 290
           +       L  M + G +  VVTF  ++D     GL                        
Sbjct: 427 NRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYT 486

Query: 291 -----------MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
                      +G  +++FD+M    + PD   ++ +  G ++ G  Q+A ++   M + 
Sbjct: 487 ALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEM 546

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
           G+  ++  +T+++ G     ++Q+A     +M   GI P+      LL  + E      A
Sbjct: 547 GIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEA 606

Query: 400 EELLQVMEEKGV 411
            EL   + EKG+
Sbjct: 607 IELQNELVEKGL 618


>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Brachypodium distachyon]
          Length = 904

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 218/430 (50%), Gaps = 36/430 (8%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           I Y+ ++ A  +         L+ ++E+DG+      +++M++  +   +  + + +F++
Sbjct: 375 IIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFER 434

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           +K+    P+  +Y  LI  Y  +GK  +++ + + M +   +K N++TY++L+  +   +
Sbjct: 435 LKECCFTPSIISYGCLINLYIKIGKVTKAIAISKEM-ESYGIKHNNKTYSMLISGFIHLH 493

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
               A+++  +M+ SG+QPD   YN L  A+ + G   RA ++L +MQ  +++P+ R   
Sbjct: 494 DFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFR 553

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            I+ G+   G+M+ A+  L  M+     P ++ +N+LI G +     +     L  M   
Sbjct: 554 PIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIA 613

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH------------------ 311
           G+ P+  T++ IM  +++ G +GK  E F  + + G++ D++                  
Sbjct: 614 GITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSA 673

Query: 312 -----------------VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
                            V++IL  G+ R G+  +A  ++  M++ GV PN+  +T+ I+ 
Sbjct: 674 LAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINA 733

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C A  MQRA  + E+M ++G+ PNLKTY TL+ G+ +A  P RA +  + M+  G++P 
Sbjct: 734 CCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPD 793

Query: 415 KSTIQLVADS 424
           ++    +  S
Sbjct: 794 EAAYHCLVTS 803



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 192/388 (49%), Gaps = 7/388 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+ +  GK  +A  I   +   G +    TY+ L++       F +  S+  ++ K G+
Sbjct: 451 INLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGL 510

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD  ++N +I A  + GN+D A++I +KM+    +P+   +  +I+G+   G  + +L 
Sbjct: 511 QPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALN 570

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L LM +     P   TYN L+     KN +E A +V+ KM  +GI P+  TY  + R Y
Sbjct: 571 ILDLMRR-SGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGY 629

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A  G+  +A +   +++   ++ +      ++   CK G M+ A+     M   ++  N 
Sbjct: 630 AANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNT 689

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            V+N LI G+    D       +  M+E GV P++ T+++ ++A   AG M + Q++ ++
Sbjct: 690 FVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEE 749

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G++P++  ++ L KG+ +A  P +A      M+  G+ P+   +  +++   +   
Sbjct: 750 MADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAAYHCLVTSLLSRAT 809

Query: 361 MQRA------MSIYEKMCEIGINPNLKT 382
           +         +SI  +M E  +  +++T
Sbjct: 810 VMEGSTYTGILSICREMFENDLTVDMRT 837



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 160/344 (46%), Gaps = 46/344 (13%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  IF  +++ G +P    Y  L+ A  +       + ++ K++K+ M+P +  F  +I 
Sbjct: 498 AFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIE 557

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
             + +G++  A+ I   M+ SGC PT  TYN LI G     + E ++ +L  MS    + 
Sbjct: 558 GFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSI-AGIT 616

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA------------- 179
           PN+ TY I++R + +   I +A+    K+   G++ D   Y TL RA             
Sbjct: 617 PNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAV 676

Query: 180 ----------------------YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
                                 +A+ G+ + A  ++ +M+ + V PN  T    ++  CK
Sbjct: 677 TREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCK 736

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD--- 274
            G+M+ A + +  M ++ + PNL  + +LIKG+      D   K+   M+  G+KPD   
Sbjct: 737 AGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAA 796

Query: 275 -------VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                  +++ +T+M+  +  G++  C+E+F++ +   +   +H
Sbjct: 797 YHCLVTSLLSRATVMEGSTYTGILSICREMFENDLTVDMRTAVH 840



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/368 (21%), Positives = 151/368 (41%), Gaps = 70/368 (19%)

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KP+ R + +++  +  +     A      M A GI+P+A  + +L  AYA   +      
Sbjct: 266 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLS 325

Query: 192 MLFEMQNNQVRPNERTCGIIVSGY-----------------------------------C 216
            + EM+   +     T  II++G+                                   C
Sbjct: 326 CVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHC 385

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD------------------- 257
           + GNM+ A   +  M+E  +   +  ++S++ G+  I+D                     
Sbjct: 386 QSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSII 445

Query: 258 -------------GVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
                         V KA+ +   ME +G+K +  T+S ++  +           IF++M
Sbjct: 446 SYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEM 505

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           +K+G++PD  ++++L + + + G   +A  IL  M+K  + P+   F  +I G+  A  M
Sbjct: 506 LKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDM 565

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           +RA++I + M   G  P + TY  L+ G  +  Q  RA  +L  M   G+ P + T  ++
Sbjct: 566 KRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTII 625

Query: 422 ADSWRAIG 429
              + A G
Sbjct: 626 MRGYAANG 633



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/302 (21%), Positives = 135/302 (44%), Gaps = 6/302 (1%)

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           E W  V        +P    +  +   YA+ G+ + A      M+   + PN      +V
Sbjct: 252 EDWQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLV 311

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
             Y    +M   +  +  MK   +   +V ++ +I GF  I D+   D    L +E   K
Sbjct: 312 HAYAVARDMRGVLSCVEEMKAEGIELTIVTYSIIIAGFAKINDAQSAD---NLFKEAKAK 368

Query: 273 ---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
               + + +S I+ A   +G M + +E+  +M + GI+  I  +  +  GY    + +K 
Sbjct: 369 LGDLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKC 428

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             +   +++    P+++ +  +I+ +    K+ +A++I ++M   GI  N KTY  L+ G
Sbjct: 429 LIVFERLKECCFTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISG 488

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMP 449
           +        A  + + M + G++P ++   L+ +++  +G    A R+L+  +++R    
Sbjct: 489 FIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPS 548

Query: 450 NK 451
           N+
Sbjct: 549 NR 550


>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
          Length = 821

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 205/433 (47%), Gaps = 34/433 (7%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P L+TY  LVAA  R    +     I  + + G+ P++I +  +INA  ++G  D+A+  
Sbjct: 348 PDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSF 407

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK----------------- 129
           F++MK+SGC P   TYN ++   G   + EE + +L  M  +                  
Sbjct: 408 FRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGN 467

Query: 130 -----------------NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT 172
                              +PN  T+N L+ A+    S  +   +  +M+ +G  P   T
Sbjct: 468 KGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTT 527

Query: 173 YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMK 232
           YN L  A A+ G+   AE ++ +M++   +PNE +  ++++ Y K GN     +    + 
Sbjct: 528 YNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIY 587

Query: 233 ELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMG 292
              + P+ ++  +L+      +   G+++A     + G KPD+V F++++  ++   +  
Sbjct: 588 NGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYD 647

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           +  E+   + ++G++PD+  ++ L   Y R GE  K E IL  ++K G  P++V + TVI
Sbjct: 648 RAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVI 707

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
            G+C    MQ A+    +M   GI P + TY T + GY         EE++  M +   R
Sbjct: 708 KGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCR 767

Query: 413 PKKSTIQLVADSW 425
           P + T ++V D +
Sbjct: 768 PNELTYKIVVDGY 780



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 117/475 (24%), Positives = 225/475 (47%), Gaps = 43/475 (9%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDGMKPDSIL 66
           GK   A  +F  + + G  PTL+TY  ++    +  R +  IL L+ ++  +G++ D   
Sbjct: 223 GKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFT 282

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            + +I+AC   G +DEA K F ++K  G    T TYN+L++ +G  G   E+L +L+ M 
Sbjct: 283 CSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEME 342

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++ N  P+  TYN LV A+      EE  + +  M+  GI P+A+TY T+  AY + G+ 
Sbjct: 343 KN-NCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKE 401

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A     +M+ +   PN  T   I+    K+  +E+ +  L  M+     PN V +N++
Sbjct: 402 DKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTM 461

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +    +      V++    M+  G +P+  TF+ ++ A+   G      +++++M+KAG 
Sbjct: 462 LAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGF 521

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA-------- 358
            P +  ++ L     R G+ + AES++  M+  G  PN   ++ +++ +           
Sbjct: 522 TPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEK 581

Query: 359 ------------------------------VKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
                                         + M+RA   +++ C+ G  P+L  + ++L 
Sbjct: 582 IEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERA---FQEFCKHGYKPDLVLFNSMLS 638

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            + + K   RA E+L+++ E G++P   T   + D +   G   + + +LK  ++
Sbjct: 639 IFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQK 693



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 195/401 (48%), Gaps = 1/401 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A   F  + E G  P + TY  ++  L ++ R + ++ ++  +  +G  P+S+ +
Sbjct: 399 GKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTW 458

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N M+  C   G      ++F++MK  G +P   T+N LI  YG  G   + +K+ + M +
Sbjct: 459 NTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIK 518

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                P   TYN L+ A   +   E A +V+  M + G +P+  +Y+ +   YA+ G   
Sbjct: 519 -AGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGR 577

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
             E++  E+ N  + P+      +V    K   +    R      +    P+LV+FNS++
Sbjct: 578 GIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSML 637

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             F   K  D   + L L+ E G++PD+VT++++MD ++  G   K +EI   + K+G +
Sbjct: 638 SIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGK 697

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+  ++ + KG+ R G  Q+A   L+ M   G+ P +V + T ++G+           +
Sbjct: 698 PDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEV 757

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
              M +    PN  TY+ ++ GY + K+   A + +  + E
Sbjct: 758 ISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNITE 798



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/410 (22%), Positives = 184/410 (44%), Gaps = 14/410 (3%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           +V  L R+ +    L L+ ++  +    D   +  +++A S  G  + A+ +F+KM+ +G
Sbjct: 180 MVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTG 239

Query: 95  CKPTTSTYNTLIKGYGNVGKP-EESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
             PT  TYN ++  YG +G+   + L LL  M +   ++ ++ T + ++ A   +  ++E
Sbjct: 240 LSPTLVTYNVMLDVYGKMGRSWNKILGLLDEM-RSNGLEFDEFTCSTVISACGREGLLDE 298

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A     ++ + G      TYN+L + + + G    A  +L EM+ N   P+  T   +V+
Sbjct: 299 ARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVA 358

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
            Y + G  E+   F+  M    + PN + + ++I  +      D        M+E G  P
Sbjct: 359 AYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVP 418

Query: 274 DVVTFSTIMDAWSSAGLMGK---CQEIFD---DMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
           +V T++ I+      G++GK    +E+ D   DM   G  P+   ++ +       G  +
Sbjct: 419 NVCTYNAIL------GMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHK 472

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
               +   M+  G  PN   F  +I  +         + +YE+M + G  P + TY  LL
Sbjct: 473 YVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALL 532

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
                      AE ++  M+ KG +P +++  L+ + +   G  R  +++
Sbjct: 533 NALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKI 582



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 128/248 (51%), Gaps = 25/248 (10%)

Query: 9   KPHEAHY--IFNCL-----------IEE----GH-RPTLITYTTLVAALTRQKRFKSILS 50
           KP+E  Y  + NC            IEE    GH  P+ I   TLV A  +++    +  
Sbjct: 557 KPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMER 616

Query: 51  LISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG 110
              +  K G KPD +LFN+M++  +++   D A ++ + +++SG +P   TYN+L+  Y 
Sbjct: 617 AFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYA 676

Query: 111 NVG---KPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ 167
             G   K EE LK +Q        KP+  +YN +++ +C +  ++EA   + +M  SGI+
Sbjct: 677 RGGECWKGEEILKGIQ----KSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIR 732

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
           P  VTYNT    Y+  G     E+++  M  +  RPNE T  I+V GYCK    ++AM F
Sbjct: 733 PCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDF 792

Query: 228 LYRMKELE 235
           +  + E++
Sbjct: 793 VSNITEMD 800



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/345 (21%), Positives = 142/345 (41%), Gaps = 38/345 (11%)

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L L S  +N K +++   ++VR    ++    A  ++ ++       D   + T+  AY
Sbjct: 162 ILNLYS--RNEKIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAY 219

Query: 181 AQYGETYRAEQM------------------------------------LFEMQNNQVRPN 204
           ++ G+  RA  M                                    L EM++N +  +
Sbjct: 220 SRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFD 279

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
           E TC  ++S   +EG +++A +F  R+K          +NSL++ F            L 
Sbjct: 280 EFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILK 339

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            ME+    PD+VT++ ++ A+  AG   +  +  D M++ GI P+   ++ +   Y +AG
Sbjct: 340 EMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAG 399

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           +  KA S    M++ G  PNV  +  ++       +++  + +   M   G  PN  T+ 
Sbjct: 400 KEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWN 459

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           T+L   G          + + M+  G  P + T   +  ++   G
Sbjct: 460 TMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCG 504



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/139 (20%), Positives = 63/139 (45%), Gaps = 6/139 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M++    G+  +   I   + + G +P L++Y T++    RQ   +  +  +S++   G+
Sbjct: 672 MDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGI 731

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P  + +N  +   S  G   E  ++   M    C+P   TY  ++ GY    K +E++ 
Sbjct: 732 RPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMD 791

Query: 121 LLQLMSQDKNVKPNDRTYN 139
            +       N+   D++++
Sbjct: 792 FVS------NITEMDKSFD 804


>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
 gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
          Length = 697

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 204/408 (50%), Gaps = 2/408 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG+P EA  +   + +EG  P + +Y+ LV A   +   +S ++LI ++E    KP  + 
Sbjct: 273 KGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVC 332

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
             +++      G V++ +  F ++   G K    +Y+TLI G+      + +  L+  M 
Sbjct: 333 CTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMR 392

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++  V P+   Y  L+R +C K  ++EA    Y M+  G+QPD +T N +   Y   G+ 
Sbjct: 393 KNGLV-PDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQF 451

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A   + +M++  + PN  T  +I++  CK   +E A   L  M +  + P+++ + ++
Sbjct: 452 EEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTI 511

Query: 247 IKGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           + G+    K+     K    M + G KPD VT + ++D +S  G M K   +F +M + G
Sbjct: 512 MDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEG 571

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           +  D   F+ +  GY R G  ++A S+   M++  V PNV  +T ++ G+C   ++  A 
Sbjct: 572 LSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMAT 631

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            + + M    + P++KTY  L+ GY   +   RA E+   M++KG  P
Sbjct: 632 MLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLP 679



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/457 (24%), Positives = 211/457 (46%), Gaps = 36/457 (7%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  I   + E+G  PT++TY   +  L R    +   + I  +       +   +NA+I
Sbjct: 208 QASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALI 267

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ---- 127
               + G  DEA+K+ ++MKD G  P   +Y+ L+  +   G  E  + L+Q M      
Sbjct: 268 QGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKK 327

Query: 128 ------------------------------DKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
                                          K  K +  +Y+ L+  +   ++++ A N+
Sbjct: 328 PPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNL 387

Query: 158 VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
           V++M  +G+ PD + Y +L R Y + G    A +  + M  + ++P+  TC  IV  YC 
Sbjct: 388 VHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCS 447

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
            G  E+A+ ++ +MK+  + PN   ++ +I      +  +   + L +M +  + P V+ 
Sbjct: 448 RGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIH 507

Query: 278 FSTIMDAWSSAGLMG-KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           ++TIMD ++       K  +++  M K G +PD    ++L   + + G+  KA ++   M
Sbjct: 508 YTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEM 567

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
            + G+  +   FT +I G+C    ++RA S+Y+KM    + PN+KTY  L+ G+ + K+ 
Sbjct: 568 AEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRL 627

Query: 397 WRAEELLQVMEEKGVRPK-KSTIQLVADSWRAIGLAR 432
             A  L+  M+   V P  K+   L+A   R   + R
Sbjct: 628 DMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDR 664



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 176/357 (49%), Gaps = 5/357 (1%)

Query: 2   NILVG---KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           ++L+G   KG  ++    F+ L  +G++  LI+Y+TL+    +    KS  +L+ ++ K+
Sbjct: 335 SVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKN 394

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+ PD I++ ++I      G + EA+K F  M   G +P   T N ++  Y + G+ EE+
Sbjct: 395 GLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEA 454

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           L  +  M +D+N+ PN  TY++++   C   ++E+AW V+  M    I P  + Y T+  
Sbjct: 455 LIYINQM-KDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMD 513

Query: 179 AYA-QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
            YA Q+    +A ++  +M     +P+  T  ++V  + K G M  A+     M E  + 
Sbjct: 514 GYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLS 573

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
            +   F ++I G+  + +          M+   V P+V T++ ++D +     +     +
Sbjct: 574 RDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATML 633

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
            DDM +  + PD+  ++ L  GY R     +A  +   M+K G  P+ + + T+  G
Sbjct: 634 IDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPDHIAYLTLGLG 690



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/432 (24%), Positives = 206/432 (47%), Gaps = 11/432 (2%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN-ACSE--SGNVD--EAMKIFQK 89
           L+  L    + +++ SL   ++  G  P+   +  MIN  C E    N+D  +A  I ++
Sbjct: 156 LLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEE 215

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M++ G  PT  TY   I G   VG  E++   +Q + +  N   N   YN L++ +C K 
Sbjct: 216 MEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDL-RSSNQPLNIYCYNALIQGFCQKG 274

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
             +EA  ++ +M   GI PD  +Y+ L  A+   G+      ++ EM++   +P    C 
Sbjct: 275 RPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCT 334

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            ++ G   +G + D + F + +       +L+ +++LI GFL   +    +  +  M + 
Sbjct: 335 SVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKN 394

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G+ PD + + +++  +   G + +  + F  M++ G++PDI   + +   Y   G+ ++A
Sbjct: 395 GLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEA 454

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
              +  M+   + PN   ++ +I+  C    +++A  +   M +  I P++  Y T++ G
Sbjct: 455 LIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDG 514

Query: 390 YG-EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSM 448
           Y  + K P +A +L + M + G +P   T+ ++ D +   G   +A  + K   E+  S 
Sbjct: 515 YAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLS- 573

Query: 449 PNKKDEIAVESI 460
              +DE A  +I
Sbjct: 574 ---RDEFAFTAI 582



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/361 (20%), Positives = 153/361 (42%), Gaps = 77/361 (21%)

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE-MQ 197
           ++L++ + S   + +A +V  +    G++ +  + N L +  A+ G+   A + LF+ ++
Sbjct: 119 SLLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAE-GDKLEAVRSLFDDLK 177

Query: 198 NNQVRPNERTCGIIVSGYCKEG-----NMEDAMRFLYRMKELEVHP-------------- 238
           N+   PN  T  I+++ YCKE      +ME A   L  M+E   +P              
Sbjct: 178 NSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCR 237

Query: 239 ---------------------NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
                                N+  +N+LI+GF      D   K L  M++ G+ PD+ +
Sbjct: 238 VGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYS 297

Query: 278 FSTIMDAWSSAG---------------------------LMG--------KCQEIFDDMV 302
           +S +++A+ + G                           LMG         C   F ++ 
Sbjct: 298 YSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELS 357

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G + D+  +S L  G+++    + A +++  MRK G+ P+ +++ ++I  +C    ++
Sbjct: 358 AKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLK 417

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A+  +  M + G+ P++ T   ++  Y    Q   A   +  M+++ + P   T  ++ 
Sbjct: 418 EALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVII 477

Query: 423 D 423
           +
Sbjct: 478 N 478



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/213 (19%), Positives = 95/213 (44%), Gaps = 5/213 (2%)

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
           V + LIK F   K            ++ GV+ ++ + + ++   +    +   + +FDD+
Sbjct: 117 VLSLLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDL 176

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQ-----KAESILTSMRKYGVHPNVVMFTTVISGWC 356
             +G  P+++ ++I+   Y +    Q     +A  IL  M + G +P VV +   I G C
Sbjct: 177 KNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLC 236

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
               ++ A +  + +       N+  Y  L+ G+ +  +P  A +LL+ M+++G+ P   
Sbjct: 237 RVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIY 296

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEEDRQSMP 449
           +  ++ +++   G       +++  E   +  P
Sbjct: 297 SYSILVNAFCTEGDIESGMNLIQEMEHCNKKPP 329



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 43/205 (20%), Positives = 81/205 (39%), Gaps = 35/205 (17%)

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH----------------- 311
           +G    +  F TI+  ++ AGL  + Q +  D+V    E +++                 
Sbjct: 54  YGFFYSINAFRTIVHVFALAGLQREAQYLLTDIVFYYKEENLNVSGLFSTFLDSPECVGR 113

Query: 312 ---VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
              V S+L K +        A+ +    +K GV  N+     ++       K++   S++
Sbjct: 114 SATVLSLLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLF 173

Query: 369 EKMCEIGINPNLKTYETLLWGY-----GEAKQPWRAEELLQVMEEKGVRPKKST------ 417
           + +   G +PN+ TY  ++  Y     G+     +A  +L+ MEEKG  P   T      
Sbjct: 174 DDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIH 233

Query: 418 ----IQLVADSWRAIGLAREAKRVL 438
               +  + D+W  I   R + + L
Sbjct: 234 GLCRVGSIEDAWNKIQDLRSSNQPL 258


>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
           [Vitis vinifera]
 gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 205/433 (47%), Gaps = 34/433 (7%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P L+TY  LVAA  R    +     I  + + G+ P++I +  +INA  ++G  D+A+  
Sbjct: 348 PDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSF 407

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK----------------- 129
           F++MK+SGC P   TYN ++   G   + EE + +L  M  +                  
Sbjct: 408 FRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGN 467

Query: 130 -----------------NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT 172
                              +PN  T+N L+ A+    S  +   +  +M+ +G  P   T
Sbjct: 468 KGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTT 527

Query: 173 YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMK 232
           YN L  A A+ G+   AE ++ +M++   +PNE +  ++++ Y K GN     +    + 
Sbjct: 528 YNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIY 587

Query: 233 ELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMG 292
              + P+ ++  +L+      +   G+++A     + G KPD+V F++++  ++   +  
Sbjct: 588 NGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYD 647

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           +  E+   + ++G++PD+  ++ L   Y R GE  K E IL  ++K G  P++V + TVI
Sbjct: 648 RAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVI 707

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
            G+C    MQ A+    +M   GI P + TY T + GY         EE++  M +   R
Sbjct: 708 KGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCR 767

Query: 413 PKKSTIQLVADSW 425
           P + T ++V D +
Sbjct: 768 PNELTYKIVVDGY 780



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 117/475 (24%), Positives = 225/475 (47%), Gaps = 43/475 (9%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDGMKPDSIL 66
           GK   A  +F  + + G  PTL+TY  ++    +  R +  IL L+ ++  +G++ D   
Sbjct: 223 GKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFT 282

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            + +I+AC   G +DEA K F ++K  G    T TYN+L++ +G  G   E+L +L+ M 
Sbjct: 283 CSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEME 342

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++ N  P+  TYN LV A+      EE  + +  M+  GI P+A+TY T+  AY + G+ 
Sbjct: 343 KN-NCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKE 401

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A     +M+ +   PN  T   I+    K+  +E+ +  L  M+     PN V +N++
Sbjct: 402 DKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTM 461

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +    +      V++    M+  G +P+  TF+ ++ A+   G      +++++M+KAG 
Sbjct: 462 LAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGF 521

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA-------- 358
            P +  ++ L     R G+ + AES++  M+  G  PN   ++ +++ +           
Sbjct: 522 TPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEK 581

Query: 359 ------------------------------VKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
                                         + M+RA   +++ C+ G  P+L  + ++L 
Sbjct: 582 IEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERA---FQEFCKHGYKPDLVLFNSMLS 638

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            + + K   RA E+L+++ E G++P   T   + D +   G   + + +LK  ++
Sbjct: 639 IFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQK 693



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 195/401 (48%), Gaps = 1/401 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A   F  + E G  P + TY  ++  L ++ R + ++ ++  +  +G  P+S+ +
Sbjct: 399 GKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTW 458

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N M+  C   G      ++F++MK  G +P   T+N LI  YG  G   + +K+ + M +
Sbjct: 459 NTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIK 518

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                P   TYN L+ A   +   E A +V+  M + G +P+  +Y+ +   YA+ G   
Sbjct: 519 -AGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGR 577

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
             E++  E+ N  + P+      +V    K   +    R      +    P+LV+FNS++
Sbjct: 578 GIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSML 637

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             F   K  D   + L L+ E G++PD+VT++++MD ++  G   K +EI   + K+G +
Sbjct: 638 SIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGK 697

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+  ++ + KG+ R G  Q+A   L+ M   G+ P +V + T ++G+           +
Sbjct: 698 PDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEV 757

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
              M +    PN  TY+ ++ GY + K+   A + +  + E
Sbjct: 758 ISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNITE 798



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/410 (22%), Positives = 184/410 (44%), Gaps = 14/410 (3%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           +V  L R+ +    L L+ ++  +    D   +  +++A S  G  + A+ +F+KM+ +G
Sbjct: 180 MVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTG 239

Query: 95  CKPTTSTYNTLIKGYGNVGKP-EESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
             PT  TYN ++  YG +G+   + L LL  M +   ++ ++ T + ++ A   +  ++E
Sbjct: 240 LSPTLVTYNVMLDVYGKMGRSWNKILGLLDEM-RSNGLEFDEFTCSTVISACGREGLLDE 298

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A     ++ + G      TYN+L + + + G    A  +L EM+ N   P+  T   +V+
Sbjct: 299 ARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVA 358

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
            Y + G  E+   F+  M    + PN + + ++I  +      D        M+E G  P
Sbjct: 359 AYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVP 418

Query: 274 DVVTFSTIMDAWSSAGLMGK---CQEIFD---DMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
           +V T++ I+      G++GK    +E+ D   DM   G  P+   ++ +       G  +
Sbjct: 419 NVCTYNAIL------GMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHK 472

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
               +   M+  G  PN   F  +I  +         + +YE+M + G  P + TY  LL
Sbjct: 473 YVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALL 532

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
                      AE ++  M+ KG +P +++  L+ + +   G  R  +++
Sbjct: 533 NALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKI 582



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 128/248 (51%), Gaps = 25/248 (10%)

Query: 9   KPHEAHY--IFNCL-----------IEE----GH-RPTLITYTTLVAALTRQKRFKSILS 50
           KP+E  Y  + NC            IEE    GH  P+ I   TLV A  +++    +  
Sbjct: 557 KPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMER 616

Query: 51  LISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG 110
              +  K G KPD +LFN+M++  +++   D A ++ + +++SG +P   TYN+L+  Y 
Sbjct: 617 AFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYA 676

Query: 111 NVG---KPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ 167
             G   K EE LK +Q        KP+  +YN +++ +C +  ++EA   + +M  SGI+
Sbjct: 677 RGGECWKGEEILKGIQ----KSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIR 732

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
           P  VTYNT    Y+  G     E+++  M  +  RPNE T  I+V GYCK    ++AM F
Sbjct: 733 PCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDF 792

Query: 228 LYRMKELE 235
           +  + E++
Sbjct: 793 VSNITEMD 800



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/345 (21%), Positives = 142/345 (41%), Gaps = 38/345 (11%)

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L L S  +N K +++   ++VR    ++    A  ++ ++       D   + T+  AY
Sbjct: 162 ILNLYS--RNEKIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAY 219

Query: 181 AQYGETYRAEQM------------------------------------LFEMQNNQVRPN 204
           ++ G+  RA  M                                    L EM++N +  +
Sbjct: 220 SRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFD 279

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
           E TC  ++S   +EG +++A +F  R+K          +NSL++ F            L 
Sbjct: 280 EFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILK 339

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            ME+    PD+VT++ ++ A+  AG   +  +  D M++ GI P+   ++ +   Y +AG
Sbjct: 340 EMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAG 399

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           +  KA S    M++ G  PNV  +  ++       +++  + +   M   G  PN  T+ 
Sbjct: 400 KEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWN 459

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           T+L   G          + + M+  G  P + T   +  ++   G
Sbjct: 460 TMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCG 504



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/139 (20%), Positives = 63/139 (45%), Gaps = 6/139 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M++    G+  +   I   + + G +P L++Y T++    RQ   +  +  +S++   G+
Sbjct: 672 MDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGI 731

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P  + +N  +   S  G   E  ++   M    C+P   TY  ++ GY    K +E++ 
Sbjct: 732 RPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMD 791

Query: 121 LLQLMSQDKNVKPNDRTYN 139
            +       N+   D++++
Sbjct: 792 FVS------NITEMDKSFD 804


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 209/407 (51%), Gaps = 16/407 (3%)

Query: 22  EEGHRPTLITYTTLVAALTRQ-KRFKSILSLISKVEKD----GMKPDSILFNAMINACSE 76
           ++G++  + +Y  L+  L +    F++      KV KD    G  P+ + F  +I    +
Sbjct: 20  QDGYKHDVHSYNHLLDILVKSGHHFRT-----GKVYKDLLHSGCSPNLVTFKILIRGNCK 74

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
           +G    A++  + + +    P    +N LI G    G P++++KL + M   + VKP   
Sbjct: 75  AGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSR-VKPEIV 133

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQ--PDAVTYNTLARAYAQYGETYRAEQMLF 194
           TYN ++   C   ++E+A  ++ +M+  G +  PD VTYNTL  A+ +      A     
Sbjct: 134 TYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFRE 193

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           +M+   + P+  TC I+VSG CK+G++E+A+  L  MK     P+++ +NS+I       
Sbjct: 194 KMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCV-- 251

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
            +  V +A  +++     PD+VTF+T++D +  AG++ +  E+ ++M +  I PD+  ++
Sbjct: 252 -AGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYT 310

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
           IL  G  R G+ Q A  +L  + + G  P+V+ +T+++ G C + +++ A  + ++M   
Sbjct: 311 ILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVR 370

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           G    +  Y +L+ GY  A    +A E+L  M    + P   T  +V
Sbjct: 371 GCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIV 417



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 197/399 (49%), Gaps = 9/399 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK-- 61
           L   G P +A  +F  +     +P ++TY T+++ L +    +    L+ ++ + G K  
Sbjct: 107 LFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSA 166

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           PD + +N +INA   +  + EA    +KMK +G  P   T N L+ G    G  EE+L++
Sbjct: 167 PDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEI 226

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           L  M     V P+  TYN ++ A C    + EA  ++  M  S   PD VT+NTL   + 
Sbjct: 227 LDGMKLAGPV-PDVITYNSIIHALCVAGKVVEAAEILKTMSCS---PDLVTFNTLLDGFC 282

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           + G   RA ++L EM    + P+  T  I+V+G C+ G ++ A   L  +      P+++
Sbjct: 283 KAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVI 342

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            + SL+ G     + +   K +  M   G +  VV +S+++  +  AG + K +EI  +M
Sbjct: 343 AYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEM 402

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           V   + P +  ++I+  G ++ G   KA S+++ +   G  P+VV + T+I G C A ++
Sbjct: 403 VSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRV 462

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGY---GEAKQPW 397
           + A  + ++M   G  PN  T  ++++G    G     W
Sbjct: 463 REACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAW 501



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/489 (24%), Positives = 215/489 (43%), Gaps = 46/489 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ILV  G       ++  L+  G  P L+T+  L+    +  +    L  +  +++  +
Sbjct: 34  LDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSV 93

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD  +FN +I+   + GN D+A+K+F+ M+ S  KP   TYNT+I G    G  E++ +
Sbjct: 94  APDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARE 153

Query: 121 LLQLMSQD------------------------------------KNVKPNDRTYNILVRA 144
           LL+ M +                                       + P+  T NILV  
Sbjct: 154 LLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSG 213

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
            C    +EEA  ++  M  +G  PD +TYN++  A    G+   A ++L  M  +   P+
Sbjct: 214 ICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCS---PD 270

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   ++ G+CK G +  A+  L  M    + P+++ +  L+ G   +     V  A  
Sbjct: 271 LVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQ---VQVAFY 327

Query: 265 LMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           L+EE    G  PDV+ +++++D    +G + +  ++  +M   G    + ++S L  GY 
Sbjct: 328 LLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYC 387

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           RAG   KA  IL  M    + P +  +  V+ G      + +A+S+   +   G  P++ 
Sbjct: 388 RAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVV 447

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY TL+ G  +A +   A +L   M  +G  P   T+  V      +G   +A  ++   
Sbjct: 448 TYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEM 507

Query: 442 EEDRQSMPN 450
              R + PN
Sbjct: 508 SRKRHA-PN 515



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 205/451 (45%), Gaps = 41/451 (9%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHR--PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK 61
           L   G   +A  +   +I +G +  P ++TY TL+ A  R  R +   +   K++  G+ 
Sbjct: 142 LCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGIN 201

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSG--------------------------- 94
           PD +  N +++   + G+V+EA++I   MK +G                           
Sbjct: 202 PDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEI 261

Query: 95  -----CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
                C P   T+NTL+ G+   G    +L++L+ M ++ N+ P+  TY ILV   C   
Sbjct: 262 LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE-NILPDVITYTILVNGLCRVG 320

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            ++ A+ ++ ++V  G  PD + Y +L     + GE   A +++ EM     R       
Sbjct: 321 QVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYS 380

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            +VSGYC+ GN+  A   L  M  + + P L  +N ++ G   IKD   + KA++L+ + 
Sbjct: 381 SLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGL--IKDG-SISKAVSLISDL 437

Query: 270 ---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              G  PDVVT++T++D    A  + +  ++ D+M   G  P+      +  G  R G  
Sbjct: 438 VARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRV 497

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             A S++  M +    PNVV++T++I G C + +M  A  + + M   G+  +   Y  L
Sbjct: 498 DDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKL 557

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           +       +   A  +   M  +G  P  ST
Sbjct: 558 IVSMSHGGRVAEAMAMYDEMVARGFLPDGST 588



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 160/331 (48%), Gaps = 11/331 (3%)

Query: 114 KPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY 173
           +P+ +++      +    K +  +YN L+              V   ++ SG  P+ VT+
Sbjct: 6   RPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTF 65

Query: 174 NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
             L R   + G+  RA + L  +    V P+     +++ G  K+GN + A++    M+ 
Sbjct: 66  KILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMES 125

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK-----PDVVTFSTIMDAWSSA 288
             V P +V +N++I G      S  ++KA  L+EE   K     PD+VT++T+++A+  A
Sbjct: 126 SRVKPEIVTYNTVISGLC---KSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRA 182

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
             + +     + M  AGI PD+   +IL  G  + G+ ++A  IL  M+  G  P+V+ +
Sbjct: 183 SRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITY 242

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
            ++I   C A K+  A  I + M     +P+L T+ TLL G+ +A    RA E+L+ M  
Sbjct: 243 NSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCR 299

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + + P   T  ++ +    +G  + A  +L+
Sbjct: 300 ENILPDVITYTILVNGLCRVGQVQVAFYLLE 330


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 203/416 (48%), Gaps = 1/416 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  EA  I   +I  G +P  I Y  L+  L +  +      L+ ++ K G++PD+  
Sbjct: 361 EGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFT 420

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N ++    +  + D A ++  +M++SG  P   +Y  +I G    G+ +E+  LL+ M 
Sbjct: 421 YNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMI 480

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +  +KPN   Y  L+     + +I  A   + KM  + + PD   YN+L +  +  G  
Sbjct: 481 SE-GLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRM 539

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             AE+   ++Q   + P+E T   ++ GYCK GN+E A + L +M    + PN   +  L
Sbjct: 540 EEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDL 599

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           ++G+    D + V   L  M   G KPD   +  ++   S +  M     +  ++ K G+
Sbjct: 600 LEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGL 659

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD+H++S L  G  +  + +KA  +L  M K G+ P +V +  +I G+C +  + RA +
Sbjct: 660 VPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARN 719

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
           +++ +   G+ PN  TY  L+ G  +      A +L + M ++G+ P      ++A
Sbjct: 720 VFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLA 775



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 220/455 (48%), Gaps = 36/455 (7%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA      +++ G  P   TY  L+  L +  R K   +L+ ++   G+KP+
Sbjct: 288 LCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPN 347

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++  +++   + G   EA  I ++M  +G +P    Y+ LI+G   +G+   + KLL+
Sbjct: 348 IVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLK 407

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +   ++P+  TYN L++    ++  + A+ ++ +M  SGI P+  +Y  +     Q 
Sbjct: 408 EMIK-VGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQN 466

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           GE+  A  +L EM +  ++PN      ++ G+ KEGN+  A   L +M +  VHP+L  +
Sbjct: 467 GESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCY 526

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           NSLIKG   +   +  ++    +++ G+ PD  T+S ++  +   G + K  ++   M+ 
Sbjct: 527 NSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLN 586

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSM--------------------------- 336
           +G++P+   ++ L +GY ++ + +K  SIL SM                           
Sbjct: 587 SGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEV 646

Query: 337 --------RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
                    K G+ P++ +++++ISG C    M++A+ + ++M + G+ P +  Y  L+ 
Sbjct: 647 AFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALID 706

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           G+  +    RA  +   +  KG+ P   T   + D
Sbjct: 707 GFCRSGDISRARNVFDSILAKGLVPNCVTYTALID 741



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/504 (24%), Positives = 230/504 (45%), Gaps = 8/504 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  PT      L+  L R    + +  L   +E  G+ PD   ++  I A  ++ + D A
Sbjct: 203 GLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAA 262

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            K+F++M+   C     TYN +I G    G  EE+    + M  D  + P+  TY  L+ 
Sbjct: 263 KKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMV-DYGLSPDAFTYGALMN 321

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C  + ++EA  ++ +M  SG++P+ V Y TL   + + G+T  A  +L EM +  V+P
Sbjct: 322 GLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQP 381

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N+     ++ G CK G +  A + L  M ++ + P+   +N L++G     D DG  + L
Sbjct: 382 NKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELL 441

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M   G+ P+V ++  +++     G   +   + ++M+  G++P+  +++ L  G+ + 
Sbjct: 442 NEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKE 501

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G    A   L  M K  VHP++  + ++I G     +M+ A   Y ++ + G+ P+  TY
Sbjct: 502 GNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTY 561

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             L+ GY +     +A++LL+ M   G++P   T   + + +       +   +L+S   
Sbjct: 562 SGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLG 621

Query: 444 DRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIP--GVVSSEHNGSSAAKIRSQIVLRSD 501
                 N    I + ++ R +N+  +     ++   G+V   H  SS      +I     
Sbjct: 622 SGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEK 681

Query: 502 TVWTATKSLFVNTYGSGVQPMVVC 525
            V      L       G++P +VC
Sbjct: 682 AV-----GLLDEMAKEGLEPGIVC 700



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 200/409 (48%), Gaps = 2/409 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EA  +   +I EG +P    Y  L+   +++         + K+ K  +
Sbjct: 460 INGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANV 519

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +N++I   S  G ++EA + + +++  G  P   TY+ LI GY   G  E++ +
Sbjct: 520 HPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQ 579

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M  +  +KPN  TY  L+  +   N  E+  +++  M+ SG +PD   Y  + R  
Sbjct: 580 LLRQM-LNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNL 638

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++      A  +L E++ N + P+      ++SG CK  +ME A+  L  M +  + P +
Sbjct: 639 SRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGI 698

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+LI GF    D          +   G+ P+ VT++ ++D     G +    +++ +
Sbjct: 699 VCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKE 758

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  GI PD  V+++LA G   A + ++A  +   M   G + NV +F T++ G+C   K
Sbjct: 759 MLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRG-YANVSLFNTLVHGFCKRGK 817

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
           +Q    +   M +  I PN +T E ++  +G+A +   A  +   +++K
Sbjct: 818 LQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQK 866



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/413 (23%), Positives = 186/413 (45%), Gaps = 36/413 (8%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPT----------------------- 98
           P + + + +++   ++G+V  A ++   M D G  PT                       
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKL 230

Query: 99  ------------TSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
                         TY+T I+ +      + + K+ + M + ++   N+ TYN+++   C
Sbjct: 231 KGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRR-RDCAMNEVTYNVMISGLC 289

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
              ++EEA+    +MV  G+ PDA TY  L     +      A+ +L EM  + ++PN  
Sbjct: 290 RSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIV 349

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
             G +V G+ KEG   +A   L  M    V PN +++++LI+G   I       K L  M
Sbjct: 350 VYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM 409

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            + G++PD  T++ +M             E+ ++M  +GI P+++ + I+  G  + GE 
Sbjct: 410 IKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGES 469

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           ++A ++L  M   G+ PN  M+  +I G      +  A    EKM +  ++P+L  Y +L
Sbjct: 470 KEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSL 529

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + G     +   AEE    ++++G+ P + T   +   +   G   +A ++L+
Sbjct: 530 IKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLR 582



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 69/314 (21%), Positives = 143/314 (45%), Gaps = 12/314 (3%)

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           S+ +   P+   +  L  + C+ +   +A  ++++M+ +   P  V   ++ RA      
Sbjct: 106 SRPRIAPPSADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLVL-ASIQRAIQDTDH 164

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
             R+             P+     ++V  Y K G++ +A + +  M +L + P     N 
Sbjct: 165 RSRSPS-----------PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNG 213

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           L+K  L     + + K    ME  G+ PDV T+ST ++A   A      +++F++M +  
Sbjct: 214 LLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRD 273

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
              +   ++++  G  R+G  ++A      M  YG+ P+   +  +++G C   +++ A 
Sbjct: 274 CAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAK 333

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           ++ ++M   G+ PN+  Y TL+ G+ +  +   A ++L+ M   GV+P K     +    
Sbjct: 334 ALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGL 393

Query: 426 RAIGLAREAKRVLK 439
             IG    A ++LK
Sbjct: 394 CKIGQLGRASKLLK 407



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/186 (20%), Positives = 86/186 (46%), Gaps = 2/186 (1%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           + + + +EG  P ++ Y  L+    R        ++   +   G+ P+ + + A+I+   
Sbjct: 685 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNC 744

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           ++G++ +A  ++++M D G  P    YN L  G  +    E++L L + M        N 
Sbjct: 745 KNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA--NV 802

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
             +N LV  +C +  ++E   +++ M+   I P+A T   +   + + G+   A ++  E
Sbjct: 803 SLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAE 862

Query: 196 MQNNQV 201
           +Q  + 
Sbjct: 863 LQQKKA 868


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 201/418 (48%), Gaps = 38/418 (9%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++E+  +P +  Y  L+    +  R      ++ ++      PD++ +N MI +    G 
Sbjct: 145 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 204

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D A+K+  ++    C+PT  TY  LI+     G  +E+LKLL  M   + +KP+  TYN
Sbjct: 205 LDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEM-LSRGLKPDMFTYN 263

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++R  C +  ++ A+ ++  +   G +PD ++YN L RA    G+    E+++ +M + 
Sbjct: 264 TIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 323

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG---------- 249
           +  PN  T  I+++  C++G +E+AM  L  MKE  + P+   ++ LI            
Sbjct: 324 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 383

Query: 250 --FLDIKDSDG--------------------VDKALTL---MEEFGVKPDVVTFSTIMDA 284
             FL+   SDG                     D+AL +   + E G  P+  +++T+  A
Sbjct: 384 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 443

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
             S+G   +   +  +MV  GI+PD   ++ +     R G   KA  +L  MR    HP+
Sbjct: 444 LWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPS 503

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           VV +  V+ G+C A +++ A+ + + M   G  PN  TY  L+ G G A   +RAE +
Sbjct: 504 VVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAG--YRAEAM 559



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 90/375 (24%), Positives = 171/375 (45%), Gaps = 35/375 (9%)

Query: 77  SGNVDEAMKIFQKMKDSG-------C---------------------------KPTTSTY 102
           SGN  E++ + + M   G       C                           +P    Y
Sbjct: 98  SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQPDVFAY 157

Query: 103 NTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV 162
           N LI G+  + + +++ ++L  M + K+  P+  TYNI++ + CS+  ++ A  V+ +++
Sbjct: 158 NALINGFCKMNRIDDATRVLDRM-RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLL 216

Query: 163 ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNME 222
           +   QP  +TY  L  A    G    A ++L EM +  ++P+  T   I+ G CKEG ++
Sbjct: 217 SDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 276

Query: 223 DAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIM 282
            A   +  ++     P+++ +N L++  L+    +  +K +T M      P+VVT+S ++
Sbjct: 277 RAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 336

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
                 G + +   +   M + G+ PD + +  L   + R G    A   L +M   G  
Sbjct: 337 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 396

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           P++V + TV++  C   K  +A+ I+ K+ E+G +PN  +Y T+      +    RA  +
Sbjct: 397 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 456

Query: 403 LQVMEEKGVRPKKST 417
           +  M   G+ P + T
Sbjct: 457 ILEMVSNGIDPDEIT 471



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 130/247 (52%), Gaps = 3/247 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+ +GK  E   +   +  E   P ++TY+ L+  L R  + +  ++L+  +++ G+ PD
Sbjct: 304 LLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 363

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +  ++ +I A    G +D A++  + M   GC P    YNT++      GK +++L++  
Sbjct: 364 AYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFG 423

Query: 124 LMSQDKNVKPNDRTYNILVRA-WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
            + +     PN  +YN +  A W S + I  A +++ +MV++GI PD +TYN++     +
Sbjct: 424 KLGE-VGCSPNSSSYNTMFSALWSSGDKI-RALHMILEMVSNGIDPDEITYNSMISCLCR 481

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G   +A ++L +M++ +  P+  T  I++ G+CK   +EDA+  L  M      PN   
Sbjct: 482 EGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETT 541

Query: 243 FNSLIKG 249
           +  LI+G
Sbjct: 542 YTVLIEG 548



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 94/198 (47%), Gaps = 1/198 (0%)

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C+ GN  +++  L  M     +P++++   LIKGF  +++     + + ++E+FG +PDV
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDV 154

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
             ++ +++ +     +     + D M      PD   ++I+       G+   A  +L  
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           +      P V+ +T +I        +  A+ + ++M   G+ P++ TY T++ G  +   
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 396 PWRAEELLQVMEEKGVRP 413
             RA E+++ +E KG  P
Sbjct: 275 VDRAFEMIRNLELKGCEP 292


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 194/411 (47%), Gaps = 17/411 (4%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           ++  L+       +    LS   K+ K G  P  + FN +++       V EA+ +F +M
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
               CKP   T+ TL+ G    G+  E++ LL  M +D  ++PN  TY  +V   C    
Sbjct: 77  ----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVED-GLQPNQITYGTIVDGMCKMGD 131

Query: 151 IEEAWNVVYKM-VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
              A N++ KM   S I+PD V Y+ +     + G    A+ +  EMQ+  + P+  T  
Sbjct: 132 TVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYS 191

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            +++G+C  G   +A R L  M   ++ P++V F+ LI   +   D +     L  M   
Sbjct: 192 CMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISS 251

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA-----------GIEPDIHVFSILAK 318
           GV P+VVT +T++D    +G +    E+F  M K+           G+EPD+  ++IL  
Sbjct: 252 GVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILIS 311

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           G +  G+  +AE +   M   G+ P+ V ++++I+G C   ++  A  +++ M     +P
Sbjct: 312 GLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSP 371

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           N+ T+ TL+ GY +A       EL   M  +G+     T   +   +R +G
Sbjct: 372 NIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVG 422



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 217/444 (48%), Gaps = 20/444 (4%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           F  L + G  PTL+T+ TL+  L  + R    L L  ++     KP+ + F  ++N    
Sbjct: 38  FGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCR 93

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
            G V EA+ +  +M + G +P   TY T++ G   +G    +L LL+ M +  ++KP+  
Sbjct: 94  EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVV 153

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
            Y+ ++          +A N+  +M   GI PD VTY+ +   +   G+   A+++L EM
Sbjct: 154 IYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEM 213

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD---I 253
              ++ P+  T   +++   KEG++  A   L  M    V PN+V  N+L+ G  D   +
Sbjct: 214 LVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKL 273

Query: 254 KDSDGVDKAL--TLME-----EF-GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           KD+  + KA+  ++M+      F GV+PDV T++ ++    + G   + +E++++M   G
Sbjct: 274 KDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 333

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           I PD   +S +  G  +     +A  +  SM      PN+V F T+I+G+C A  +   +
Sbjct: 334 IVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGL 393

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ-LVADS 424
            ++ +M   GI  N  TY TL+ G+ +      + ++ Q M   GV P   TI+ ++   
Sbjct: 394 ELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGL 453

Query: 425 WRAIGLAREAKRVLKSAEEDRQSM 448
           W       E K+ L   EE + SM
Sbjct: 454 WS----KEELKKALAMLEELQMSM 473



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 204/386 (52%), Gaps = 19/386 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK-DG 59
           MN L  +G+  EA  + + ++E+G +P  ITY T+V  + +     S L+L+ K+E+   
Sbjct: 88  MNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSH 147

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +KPD ++++A+I+   + G   +A  +F +M+D G  P   TY+ +I G+ + GK  E+ 
Sbjct: 148 IKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQ 207

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +LLQ M   K + P+  T++ L+ A   +  +  A +++ +M++SG+ P+ VT NTL   
Sbjct: 208 RLLQEMLVRK-ISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDG 266

Query: 180 YAQYGETYRAEQMLFEMQN-----------NQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
               G+   A +M   MQ            N V P+ +T  I++SG   EG   +A    
Sbjct: 267 LCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELY 326

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAW 285
             M    + P+ V ++S+I G    K S  +D+A  + +  G K   P++VTF+T++  +
Sbjct: 327 EEMPHRGIVPDTVTYSSMINGL--CKQSR-LDEATQMFDSMGSKSFSPNIVTFNTLITGY 383

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
             AG++    E+F +M + GI  +   +  L +G+ + G    +  I   M   GV+P+ 
Sbjct: 384 CKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDT 443

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKM 371
           +    +++G  +  ++++A+++ E++
Sbjct: 444 ITIRNMLTGLWSKEELKKALAMLEEL 469



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 168/358 (46%), Gaps = 50/358 (13%)

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR------------------ 178
           ++NIL++ +CS + +  A +   K+   G  P  VT+NTL                    
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76

Query: 179 -------------AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
                           + G    A  +L  M  + ++PN+ T G IV G CK G+   A+
Sbjct: 77  CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 136

Query: 226 RFLYRMKEL-EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
             L +M+EL  + P++V+++++I G                M++ G+ PD+VT+S +++ 
Sbjct: 137 NLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMING 196

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           + S+G   + Q +  +M+   I PD+  FS L    V+ G+   A+ +L  M   GV PN
Sbjct: 197 FCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPN 256

Query: 345 VVMFTTVISGWCNAVKMQRAMSIY----EKMCEI-------GINPNLKTYETLLWGYGEA 393
           VV   T++ G C++ K++ A+ ++    + M +I       G+ P+++TY  L+ G    
Sbjct: 257 VVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINE 316

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
            +   AEEL + M  +G+ P   T   + +     GL ++++  L  A +   SM +K
Sbjct: 317 GKFLEAEELYEEMPHRGIVPDTVTYSSMIN-----GLCKQSR--LDEATQMFDSMGSK 367



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 136/285 (47%), Gaps = 15/285 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N     GK  EA  +   ++     P ++T++ L+ AL ++    S   L+ ++   G+
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGV 253

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDS-----------GCKPTTSTYNTLIKGY 109
            P+ +  N +++   +SG + +A+++F+ M+ S           G +P   TYN LI G 
Sbjct: 254 CPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGL 313

Query: 110 GNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
            N GK  E+ +L + M   + + P+  TY+ ++   C ++ ++EA  +   M +    P+
Sbjct: 314 INEGKFLEAEELYEEMPH-RGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPN 372

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
            VT+NTL   Y + G      ++  EM    +  N  T   ++ G+ K GN+  ++    
Sbjct: 373 IVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQ 432

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
            M    V+P+ +   +++ G    ++   + KAL ++EE  +  D
Sbjct: 433 EMISSGVYPDTITIRNMLTGLWSKEE---LKKALAMLEELQMSMD 474



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 4/145 (2%)

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           I  DI+ F+IL K +    +   A S    + K G HP +V F T++ G C   ++  A+
Sbjct: 11  IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            ++ +MC+    PN+ T+ TL+ G     +   A  LL  M E G++P + T   + D  
Sbjct: 71  DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126

Query: 426 RAIGLAREAKRVLKSAEEDRQSMPN 450
             +G    A  +L+  EE     P+
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPD 151



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 68/133 (51%), Gaps = 2/133 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  + +  EA  +F+ +  +   P ++T+ TL+    +       L L  ++ + G+
Sbjct: 345 INGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGI 404

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             ++I +  +I    + GN++ ++ IFQ+M  SG  P T T   ++ G  +  + +++L 
Sbjct: 405 VANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALA 464

Query: 121 LLQ--LMSQDKNV 131
           +L+   MS D ++
Sbjct: 465 MLEELQMSMDHHL 477


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 212/425 (49%), Gaps = 10/425 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +   GK  EA  +FN +  +G  P  +TY+ L+ +  ++ +    L  + K+ + G+
Sbjct: 362 INSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGI 421

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K     ++++I+   + G +  A  +F +M  +G KP    Y +LI GY   G+   + +
Sbjct: 422 KATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFR 481

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M+  K + PN  T+  L+   C  N + EA  +  +MV   + P+ VTYN L   +
Sbjct: 482 LYHEMT-GKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGH 540

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL-------YRMKE 233
            + G T RA ++L EM    + P+  T   ++SG C  G + +A  F+        ++ E
Sbjct: 541 CKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNE 600

Query: 234 LE-VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMG 292
           +E   PN+V + +LI G   I   D  +     M      P+  T++  +D  +S G + 
Sbjct: 601 IEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIE 660

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           K  ++ D +++ G   +   ++IL +G+ + G  Q+A  +L +M   G+ P+ + ++T+I
Sbjct: 661 KAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTII 719

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
             +C    ++ A+ ++E M   G+NP+   Y  L++G     +  +A EL   M  +GV+
Sbjct: 720 YEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVK 779

Query: 413 PKKST 417
           P ++T
Sbjct: 780 PNRAT 784



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 206/429 (48%), Gaps = 1/429 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G  P + T + ++  L R ++F+  L L  ++   G++PD  ++ A++ +  E  +
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
              A ++  +M+ SGC  + +TYN  I+G     +  E++++  L+S  K ++ +  TY 
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSY-KGLRADVGTYC 289

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            LV   C     E    ++ +M+  G  P     + L     + G    A  ++ +++  
Sbjct: 290 TLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKF 349

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            V P+      +++  CK+G +++A      M    + PN V ++ LI  F      D  
Sbjct: 350 GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVA 409

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
              L  M E G+K  V  +S+++      G +   + +FD+M+  G++P++ +++ L  G
Sbjct: 410 LHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISG 469

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y + GE   A  +   M   G+ PN   FT +ISG C+A +M  A  ++ +M E  + PN
Sbjct: 470 YCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPN 529

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             TY  L+ G+ +     RA ELL  M EKG+ P   T + +     + G   EA+  + 
Sbjct: 530 EVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMN 589

Query: 440 SAEEDRQSM 448
             + ++Q +
Sbjct: 590 DLQGEQQKL 598



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 201/435 (46%), Gaps = 10/435 (2%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  I N L  +G R  + TY TLV  L + + F++   +++++ + G  P     + ++
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLV 327

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   + GN+  A  +  K+K  G  P+   YN LI      GK +E+  L   M   K +
Sbjct: 328 DGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGH-KGL 386

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PND TY+IL+ ++C +  ++ A + + KM   GI+     Y++L   + + G+   A+ 
Sbjct: 387 FPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKS 446

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  EM  N ++PN      ++SGYCKEG + +A R  + M    + PN   F +LI G  
Sbjct: 447 LFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLC 506

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                   +K    M E+ V P+ VT++ +++     G   +  E+ D+MV+ G+ PD +
Sbjct: 507 HANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTY 566

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRK--------YGVHPNVVMFTTVISGWCNAVKMQR 363
            +  L  G    G   +A   +  ++          G  PNVV +T +I+G C    M +
Sbjct: 567 TYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDK 626

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  +  +M      PN  TY   L          +A +L  V+ E G      T  ++  
Sbjct: 627 AELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIR 685

Query: 424 SWRAIGLAREAKRVL 438
            +  +G  +EA  VL
Sbjct: 686 GFCKLGRIQEAAEVL 700



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 203/447 (45%), Gaps = 10/447 (2%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A ++F+ ++  G RP +  YT +V +L   K F     +I ++E  G       +N  I 
Sbjct: 199 ALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIR 258

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              ++  V EA++I   +   G +    TY TL+ G   V + E   +++  M +   V 
Sbjct: 259 GLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFV- 317

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P++   + LV     K +I  A+++V K+   G+ P    YN L  +  + G+   AE +
Sbjct: 318 PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESL 377

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
              M +  + PN+ T  I++  +CK G ++ A+ FL +M E+ +   +  ++SLI G   
Sbjct: 378 FNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCK 437

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +            M   G+KP+VV +++++  +   G +     ++ +M   GI P+ + 
Sbjct: 438 LGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYT 497

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           F+ L  G   A    +A  +   M ++ V PN V +  +I G C      RA  + ++M 
Sbjct: 498 FTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMV 557

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELL--------QVMEEKGVRPKKSTIQLVADS 424
           E G+ P+  TY  L+ G     +   A E +        ++ E +G  P   T   + + 
Sbjct: 558 EKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALING 617

Query: 425 WRAIGLAREAKRVLKSAEEDRQSMPNK 451
              IGL  +A+ + +       S+PN+
Sbjct: 618 LCKIGLMDKAELLCREMLAS-NSLPNQ 643



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 167/357 (46%), Gaps = 10/357 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK   A  +F+ +I  G +P ++ YT+L++   ++    +   L  ++   G+ P++  F
Sbjct: 439 GKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTF 498

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            A+I+    +  + EA K+F +M +    P   TYN LI+G+   G    + +LL  M +
Sbjct: 499 TALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVE 558

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS--------GIQPDAVTYNTLARA 179
            K + P+  TY  L+   CS   + EA   +  +           G  P+ VTY  L   
Sbjct: 559 -KGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALING 617

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G   +AE +  EM  +   PN+ T    +     EGN+E A++    + E     N
Sbjct: 618 LCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLAN 676

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            V +N LI+GF  +       + L  M + G+ PD +++STI+  +   G + +  ++++
Sbjct: 677 TVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWE 736

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
            M+  G+ PD   ++ L  G    GE  KA  +   M + GV PN   + ++I G C
Sbjct: 737 SMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 793



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 10/251 (3%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKV--------EKD 58
           +G    A  + + ++E+G  P   TY  L++ L    R       ++ +        E +
Sbjct: 543 EGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIE 602

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G  P+ + + A+IN   + G +D+A  + ++M  S   P  +TY   +    + G  E++
Sbjct: 603 GCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKA 662

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           ++L  ++ +      N  TYNIL+R +C    I+EA  V+  M+ SGI PD ++Y+T+  
Sbjct: 663 IQLHDVLLE--GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIY 720

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            Y + G+   A ++   M N  V P+      ++ G C  G +  A      M    V P
Sbjct: 721 EYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKP 780

Query: 239 NLVVFNSLIKG 249
           N   +NSLI G
Sbjct: 781 NRATYNSLIHG 791



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 2/151 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G   +A  + + L+E G     +TY  L+    +  R +    ++  +   G+
Sbjct: 650 LDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGI 708

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I ++ +I      G++ EA+K+++ M + G  P T  YN LI G    G+  ++ +
Sbjct: 709 SPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFE 768

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
           L   M + + VKPN  TYN L+   C  +S+
Sbjct: 769 LRDDMMR-RGVKPNRATYNSLIHGTCLMSSV 798


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 209/405 (51%), Gaps = 1/405 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG+  +A +  + L+ +G +   ++Y TL+  + +    +  + L+ K++    KP+  +
Sbjct: 390 KGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEM 449

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +I+A  +   V EA  +F +M   G      TY+TLI G+  VGK +E++ LL  M 
Sbjct: 450 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMV 509

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K + P+ RTY ILV A   +  ++EA +V+  M+ + ++PD  TYNTL   Y    E 
Sbjct: 510 L-KTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEV 568

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A+ +   M    V P+  T  I+++G+CK   +++A+     M +  + P+ V ++SL
Sbjct: 569 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSL 628

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + G         V   +  M + G   DV+T+++++D     G + K   +F+ M   GI
Sbjct: 629 VDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGI 688

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+   F+IL  G  + G  + A+ +   +   G H +V ++  +I G C    ++ A++
Sbjct: 689 RPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALT 748

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           +  KM E G  PN  T++ ++    +  +  +AE+LL+ M  +G+
Sbjct: 749 MLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 216/445 (48%), Gaps = 9/445 (2%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G +P L T   L+       +     S+++K+ K G  P ++  N +I      G V +
Sbjct: 336 KGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKK 395

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+    K+   G +    +Y TLI G   +G    ++KLL+ +   +  KPN   Y+ ++
Sbjct: 396 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKI-DGRLTKPNVEMYSTII 454

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
            A C    + EA+ +  +M   GI  D VTY+TL   +   G+   A  +L EM    + 
Sbjct: 455 DALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTIN 514

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL---DIKDSDGV 259
           P+ RT  I+V    KEG +++A   L  M +  V P++  +N+L+ G+L   ++K +  V
Sbjct: 515 PDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHV 574

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
             A++LM   GV PDV T++ +++ +  + ++ +   +F +M +  + PD   +S L  G
Sbjct: 575 FNAMSLM---GVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDG 631

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             ++G       ++  MR  G   +V+ + ++I G C    + +A++++ KM + GI PN
Sbjct: 632 LCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPN 691

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             T+  LL G  +  +   A+E+ Q +  KG         ++       GL  EA  +L 
Sbjct: 692 TFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLS 751

Query: 440 SAEEDRQSMPNKKD-EIAVESIHRK 463
             EE+   +PN    +I + ++ +K
Sbjct: 752 KMEEN-GCIPNAVTFDIIINALFKK 775



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 220/467 (47%), Gaps = 37/467 (7%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG+  EA +  + L+ +G +   ++Y TL+  + R    ++ +  + K++    KP+  +
Sbjct: 76  KGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEM 135

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I+A  +   V EA  +F +M   G      TY+TLI G+  VGK +E+L LL +M 
Sbjct: 136 YNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMV 195

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K + PN  TYNILV A C +  ++EA +V+  M+ + ++ + +TY+TL   Y    E 
Sbjct: 196 L-KTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEV 254

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A+ +   M    V P+  +  I+++G+CK   ++ A+  L++   L   P ++ FN +
Sbjct: 255 KKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALN-LFKEMILSRFPPIIQFNKI 313

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +  F  +K           +E  G++PD+ T + +++ +   G +     +   ++K G 
Sbjct: 314 LDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGY 373

Query: 307 EPDIHVFSILAKGYVRAGEPQKA-------------------ESILTSMRKYG------- 340
            P     + L KG    G+ +KA                    +++  + K G       
Sbjct: 374 PPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIK 433

Query: 341 ---------VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
                      PNV M++T+I   C    +  A  ++ +M   GI+ ++ TY TL++G+ 
Sbjct: 434 LLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFC 493

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
              +   A  LL  M  K + P   T  ++ D+    G  +EAK VL
Sbjct: 494 IVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVL 540



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/466 (23%), Positives = 208/466 (44%), Gaps = 35/466 (7%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA+ +F+ +  +G    ++TY+TL+       + K  L L++ +    + P+   +N ++
Sbjct: 151 EAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILV 210

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +A  + G V EA  +   M  +  K    TY+TL+ GY  V + +++  +   MS    V
Sbjct: 211 DALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSL-MGV 269

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS--------------------------- 164
            P+  +YNI++  +C    +++A N+  +M+ S                           
Sbjct: 270 TPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSL 329

Query: 165 -------GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
                  GIQPD  T N L   +   G+      +L ++      P+  T   ++ G C 
Sbjct: 330 SHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCL 389

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
           +G ++ A+ F  ++       N V + +LI G   I D+ G  K L  ++    KP+V  
Sbjct: 390 KGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEM 449

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           +STI+DA     L+ +   +F +M   GI  D+  +S L  G+   G+ ++A  +L  M 
Sbjct: 450 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMV 509

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
              ++P+V  +T ++       K++ A S+   M +  + P++ TY TL+ GY    +  
Sbjct: 510 LKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVK 569

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           +A+ +   M   GV P   T  ++ + +    +  EA  + K   +
Sbjct: 570 KAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQ 615



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 211/431 (48%), Gaps = 12/431 (2%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NILV     +GK  EA  +   +++   +  +ITY+TL+         K    + + +  
Sbjct: 207 NILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSL 266

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+ PD   +N MIN   +   VD+A+ +F++M  S   P    +N ++  +  +     
Sbjct: 267 MGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQ-FNKILDSFAKMKHYST 325

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           ++ L   + + K ++P+  T NIL+  +C    I   ++V+ K++  G  P  VT NTL 
Sbjct: 326 AVSLSHRL-ELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLI 384

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
           +     G+  +A     ++     + N+ +   +++G CK G+   A++ L ++      
Sbjct: 385 KGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTK 444

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKC 294
           PN+ +++++I      +    V +A  L  E    G+  DVVT+ST++  +   G + + 
Sbjct: 445 PNVEMYSTIIDALCKYQ---LVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEA 501

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
             + ++MV   I PD+  ++IL     + G+ ++A+S+L  M K  V P+V  + T+++G
Sbjct: 502 IGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNG 561

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
           +    ++++A  ++  M  +G+ P++ TY  L+ G+ ++K    A  L + M +K + P 
Sbjct: 562 YLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPD 621

Query: 415 KSTIQLVADSW 425
             T   + D  
Sbjct: 622 TVTYSSLVDGL 632



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 192/423 (45%), Gaps = 41/423 (9%)

Query: 49  LSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
           LS+++K+ K G  PD++  N +I      G V EA+    K+   G +    +Y TLI G
Sbjct: 48  LSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLING 107

Query: 109 YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP 168
              +G    ++K L+ +   +  KPN   YN ++ A C    + EA+ +  +M   GI  
Sbjct: 108 VCRIGDTRAAIKFLRKI-DGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           + VTY+TL   +   G+   A  +L  M    + PN  T  I+V   CKEG +++A   L
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226

Query: 229 YRMKELEVHPNLVVFNSLIKGFL---DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
             M +  V  N++ +++L+ G+    ++K +  V  A++LM   GV PDV +++ +++ +
Sbjct: 227 AVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLM---GVTPDVHSYNIMINGF 283

Query: 286 SSAGLMGKCQEIFDDMVKA----------------------------------GIEPDIH 311
                + K   +F +M+ +                                  GI+PD+ 
Sbjct: 284 CKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLF 343

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
             +IL   +   G+     S+L  + K G  P+ V   T+I G C   ++++A+  ++K+
Sbjct: 344 TLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKL 403

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
              G   N  +Y TL+ G  +      A +LL+ ++ +  +P       + D+     L 
Sbjct: 404 LAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLV 463

Query: 432 REA 434
            EA
Sbjct: 464 SEA 466



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 112/237 (47%)

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+  T   ++ G C +G +++A+ F  ++       N V + +LI G   I D+    K 
Sbjct: 61  PDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKF 120

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           L  ++    KP+V  ++TI+DA     L+ +   +F +M   GI  ++  +S L  G+  
Sbjct: 121 LRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCI 180

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G+ ++A  +L  M    ++PNV  +  ++   C   K++ A S+   M +  +  N+ T
Sbjct: 181 VGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVIT 240

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           Y TL+ GY    +  +A+ +   M   GV P   +  ++ + +  I    +A  + K
Sbjct: 241 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFK 297



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 61/122 (50%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   +A  +FN + ++G RP   T+T L+  L +  R K    +   +   G   D
Sbjct: 667 LCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLD 726

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             ++N MI    + G ++EA+ +  KM+++GC P   T++ +I       + +++ KLL+
Sbjct: 727 VYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLR 786

Query: 124 LM 125
            M
Sbjct: 787 QM 788


>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 730

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 205/422 (48%), Gaps = 1/422 (0%)

Query: 18  NCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSES 77
           + ++ +G  P + TYT+L++A +R  + +  + + +++      P+S  FNA+I    ++
Sbjct: 282 DSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKN 341

Query: 78  GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT 137
            N  E M IF+ M+  G +P   T+N+L+  +G  G   E LK+ + M +    +P+  T
Sbjct: 342 KNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKK-AGFEPDKAT 400

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           +NIL+ A+    S ++A ++   M+ +G  PD  T+NTL  A A+ G    AE +L E+ 
Sbjct: 401 FNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELN 460

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
            +  +PN+     ++  Y   G +E     +  +  + V    ++  + +  +      D
Sbjct: 461 RSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVD 520

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
             + A   M   G   D  TF+ ++  +   G+M K  + F  +   G+EPD+  ++ L 
Sbjct: 521 EAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLM 580

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
             Y R G  +K E+ L      G  P++V + TVI  +    ++  A  I+ +M   GI 
Sbjct: 581 GMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQ 640

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           P+  TY T +  Y        A  +++ M + G +P + T + + D++  IG   E +R+
Sbjct: 641 PDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERI 700

Query: 438 LK 439
           LK
Sbjct: 701 LK 702



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 211/444 (47%), Gaps = 38/444 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEE-GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG 59
           M  L  +G+ ++A  +FN + +    RP  +T   ++  L R+ +  ++  L   + ++G
Sbjct: 53  MKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEG 112

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES- 118
              D   + ++I+A S +    EA+  F++MK++G +P+  TYN +I  YG  G+  E+ 
Sbjct: 113 YPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENI 172

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           L+L + M + + ++P++ TYN  + A  S +  EEA  +  +M +S   PD VTYN L  
Sbjct: 173 LELFEEM-KAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLD 231

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERT-------------C-------------GI-- 210
            Y + G    A  +L EM++    PN  T             C             GI  
Sbjct: 232 VYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEP 291

Query: 211 -------IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
                  ++S Y + G +E AM    +M+     PN   FN+LI      K+   +    
Sbjct: 292 DVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIF 351

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M+  GV+PD+VT+++++ A+   G+  +  ++F  M KAG EPD   F+IL + Y R 
Sbjct: 352 EDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRC 411

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G   +A SI   M + G  P++  F T+++      + + A  I +++      PN   Y
Sbjct: 412 GSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAY 471

Query: 384 ETLLWGYGEAKQPWRAEELLQVME 407
            ++L  Y    +  + +E++  + 
Sbjct: 472 ASMLHAYANGGELEKLKEMVDTLH 495



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/501 (24%), Positives = 212/501 (42%), Gaps = 72/501 (14%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDGMKPDSILF 67
           K  EA   F  + E G +P+L+TY  ++    ++ R +++IL L  +++  G++PD   +
Sbjct: 132 KFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTY 191

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N  I AC+     +EA ++F +MK S C P   TYN L+  YG  G   E+  +L+ M +
Sbjct: 192 NTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEM-E 250

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                PN  TYN L+ A+        A  +   MV+ GI+PD  TY +L  AY++ G+  
Sbjct: 251 SAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVE 310

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A ++  +M+ +   PN  T   ++  + K  N  + M     M+   V P++V +NSL+
Sbjct: 311 QAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLL 370

Query: 248 ---------------------KGFLDIKDSDGV-----------DKALTL---MEEFGVK 272
                                 GF   K +  +           D+AL++   M + G  
Sbjct: 371 GAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCT 430

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK---- 328
           PD+ TF+T++ A +  G     + I D++ ++  +P+   ++ +   Y   GE +K    
Sbjct: 431 PDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEM 490

Query: 329 -------------------------------AESILTSMRKYGVHPNVVMFTTVISGWCN 357
                                          AE    +MR +G   +   F  +IS +  
Sbjct: 491 VDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGK 550

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              M +A   +  +   G+ P++ TY  L+  YG      + E  L+     G  P   +
Sbjct: 551 KGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVS 610

Query: 418 IQLVADSWRAIGLAREAKRVL 438
              V  S+   G    A R+ 
Sbjct: 611 YNTVIFSYSKHGQLSSATRIF 631



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 172/370 (46%), Gaps = 7/370 (1%)

Query: 69  AMINACSESGNVDEAMKIFQKMKDS-GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +++      G  ++A+++F  M+ S   +P   T   +++  G   +     +L + + +
Sbjct: 51  SIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLRE 110

Query: 128 DKNVKPND-RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +    P D   Y  L+ A       +EA     +M  +G QP  VTYN +   Y + G +
Sbjct: 111 EG--YPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRS 168

Query: 187 YRAEQMLFE-MQNNQVRPNERTCGIIVSGYCKEGNM-EDAMRFLYRMKELEVHPNLVVFN 244
           +     LFE M+   ++P+E T    ++  C  G++ E+A     +MK     P+ V +N
Sbjct: 169 WENILELFEEMKAQGIQPDEYTYNTAITA-CASGSLCEEATELFTQMKSSNCTPDRVTYN 227

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +L+  +      +     L  ME  G  P++VT++ ++ A+  AGL     E+ D MV  
Sbjct: 228 ALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSK 287

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           GIEPD+  ++ L   Y RAG+ ++A  I   MR     PN   F  +I            
Sbjct: 288 GIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEM 347

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           M I+E M   G+ P++ T+ +LL  +G+        ++ + M++ G  P K+T  ++ ++
Sbjct: 348 MVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEA 407

Query: 425 WRAIGLAREA 434
           +   G + +A
Sbjct: 408 YGRCGSSDQA 417



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/343 (22%), Positives = 156/343 (45%), Gaps = 1/343 (0%)

Query: 98  TTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
           ++S   +++KG G  G+  ++L++   M Q  N +P+  T  +++R    ++ +     +
Sbjct: 45  SSSELLSIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRL 104

Query: 158 VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
              +   G   D   Y +L  A ++  +   A     +M+    +P+  T  +I+  Y K
Sbjct: 105 FKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGK 164

Query: 218 EG-NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           +G + E+ +     MK   + P+   +N+ I         +   +  T M+     PD V
Sbjct: 165 KGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRV 224

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T++ ++D +  AG   +   +  +M  AG  P+I  ++ L   + RAG    A  +  SM
Sbjct: 225 TYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSM 284

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
              G+ P+V  +T+++S +  A K+++AM IY +M      PN  T+  L+  +G+ K  
Sbjct: 285 VSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNF 344

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
                + + M+  GV P   T   +  ++   G+  E  +V +
Sbjct: 345 SEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFR 387



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/306 (23%), Positives = 142/306 (46%), Gaps = 40/306 (13%)

Query: 1   MNILV---GK-GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
            NIL+   G+ G   +A  I++ +++ G  P L T+ TL+AAL R+ R++    ++ ++ 
Sbjct: 401 FNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELN 460

Query: 57  KDGMKPDSILFNAMINACSESGN-----------------------------------VD 81
           +   KP+ I + +M++A +  G                                    VD
Sbjct: 461 RSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVD 520

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           EA   F  M+  G    TST+N +I  YG  G  +++     L+ +   ++P+  TYN L
Sbjct: 521 EAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALL-RSTGLEPDVVTYNCL 579

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +  +  +    +    + + +A+G  PD V+YNT+  +Y+++G+   A ++  EM +N +
Sbjct: 580 MGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGI 639

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           +P+  T    V  Y   G   +A+  +  M +    P+ V + +L+  +  I   + V++
Sbjct: 640 QPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVER 699

Query: 262 ALTLME 267
            L  ++
Sbjct: 700 ILKFIK 705


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 201/391 (51%), Gaps = 9/391 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G   +A  +F+ +I  G +P + TYT L+  L R  + +    +  K+ KD + P 
Sbjct: 311 LCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPS 370

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I +NA+IN   + G V  A ++   M+   CKP   T+N L++G   VGKP +++ LL+
Sbjct: 371 VITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK 430

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D  + P+  +YN+L+   C +  +  A+ ++  M    I+PD +T+  +  A+ + 
Sbjct: 431 RM-LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQ 489

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV----HPN 239
           G+   A   L  M    +  +E T   ++ G CK G   DA+  L  + ++ +    H  
Sbjct: 490 GKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSL 549

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            V+ + L KG   +K+   +   L  + + G+ P VVT++T++D    +G +     I +
Sbjct: 550 NVILDMLSKG-CKVKEELAM---LGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILE 605

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            M  +G  P+++ ++I+  G  + G  ++AE +L++M+  GV PN V +T ++ G+ N  
Sbjct: 606 LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           K+ RA+     M E G   N + Y +LL G+
Sbjct: 666 KLDRALETVRAMVERGYELNDRIYSSLLQGF 696



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 192/399 (48%), Gaps = 1/399 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P  ++Y+ L+  L    R +    L  ++ + G +P +  +  +I A  + G +D+A  +
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F +M   GCKP   TY  LI G    GK EE+  + + M +D+ + P+  TYN L+  +C
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDR-IFPSVITYNALINGYC 382

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               +  A+ ++  M     +P+  T+N L     + G+ Y+A  +L  M +N + P+  
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIV 442

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           +  +++ G C+EG+M  A + L  M   ++ P+ + F ++I  F     +D     L LM
Sbjct: 443 SYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLM 502

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              G+  D VT +T++D     G       I + +VK  I    H  +++     +  + 
Sbjct: 503 LRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKV 562

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           ++  ++L  + K G+ P+VV +TT++ G   +  +  +  I E M   G  PN+  Y  +
Sbjct: 563 KEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTII 622

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           + G  +  +   AE+LL  M++ GV P   T  ++   +
Sbjct: 623 INGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 118/464 (25%), Positives = 216/464 (46%), Gaps = 38/464 (8%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G    +I Y T+V AL +    ++    +SK+ K G   DS +  +++       N+ +
Sbjct: 189 DGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRD 248

Query: 83  AMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           A+K+F  M K+  C P + +Y+ LI G   VG+ EE+  L   M + K  +P+ RTY +L
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGE-KGCQPSTRTYTVL 307

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           ++A C +  I++A+N+  +M+  G +P+  TY  L     + G+   A  +  +M  +++
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            P+  T   +++GYCK+G +  A   L  M++    PN+  FN L++G   +        
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            L  M + G+ PD+V+++ ++D     G M    ++   M    IEPD   F+ +   + 
Sbjct: 428 LLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFC 487

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE------------ 369
           + G+   A + L  M + G+  + V  TT+I G C   K + A+ I E            
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPH 547

Query: 370 -----------------------KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
                                  K+ ++G+ P++ TY TL+ G   +     +  +L++M
Sbjct: 548 SLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELM 607

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           +  G  P      ++ +     G   EA+++L SA +D    PN
Sbjct: 608 KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL-SAMQDSGVSPN 650



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 194/412 (47%), Gaps = 5/412 (1%)

Query: 15  YIFNCLIEE-GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA 73
           Y F+ L E  G R     Y++L+ +L +            ++E DG     I +  ++NA
Sbjct: 145 YCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNA 204

Query: 74  CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP 133
             ++G  + A     K+   G    +    +L+ G+       ++LK+  +MS++    P
Sbjct: 205 LCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAP 264

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           N  +Y+IL+   C    +EEA+ +  +M   G QP   TY  L +A    G   +A  + 
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
            EM     +PN  T  +++ G C++G +E+A     +M +  + P+++ +N+LI G+   
Sbjct: 325 DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGY--C 382

Query: 254 KDSDGVD--KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
           KD   V   + LT+ME+   KP+V TF+ +M+     G   K   +   M+  G+ PDI 
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIV 442

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            +++L  G  R G    A  +L+SM  + + P+ + FT +I+ +C   K   A +    M
Sbjct: 443 SYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLM 502

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
              GI+ +  T  TL+ G  +  +   A  +L+ + +  +     ++ ++ D
Sbjct: 503 LRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILD 554



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/415 (21%), Positives = 169/415 (40%), Gaps = 86/415 (20%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GKP++A ++   +++ G  P +++Y  L+  L R+    +   L+S +    ++PD + F
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTF 479

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ---- 123
            A+INA  + G  D A      M   G      T  TLI G   VGK  ++L +L+    
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVK 539

Query: 124 ---------------LMSQDKNVK---------------PNDRTYNILVRAWCSKNSIEE 153
                          ++S+   VK               P+  TY  LV        I  
Sbjct: 540 MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           ++ ++  M  SG  P+   Y  +     Q+G    AE++L  MQ++ V PN  T  ++V 
Sbjct: 600 SFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL---------------DI----K 254
           GY   G ++ A+  +  M E     N  +++SL++GF+               DI     
Sbjct: 660 GYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRET 719

Query: 255 DSDGVDKALTLMEEFG---------------------VKPDVV------------TFSTI 281
           D + +++ ++++E+ G                        D+V                I
Sbjct: 720 DPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDII 779

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           M+++ S     KC E+   ++K+G  P    F ++ +G  + G+ ++A  ++  +
Sbjct: 780 MESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMEL 834



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 137/328 (41%), Gaps = 39/328 (11%)

Query: 116 EESLKLLQLMSQDKNV---KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT 172
           +E LKL+    + + V   + N   Y+ L+ +    +    A+    +M A G     + 
Sbjct: 138 KEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMID 197

Query: 173 YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM- 231
           Y T+  A  + G T  AE  + ++       +      ++ G+C+  N+ DA++    M 
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
           KE+   PN V ++ LI G  ++           L E FG+K                   
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVG---------RLEEAFGLK------------------- 289

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
                  D M + G +P    +++L K     G   KA ++   M   G  PNV  +T +
Sbjct: 290 -------DQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVL 342

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I G C   K++ A  +  KM +  I P++ TY  L+ GY +  +   A ELL VME++  
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC 402

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLK 439
           +P   T   + +    +G   +A  +LK
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLK 430


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 107/432 (24%), Positives = 208/432 (48%), Gaps = 13/432 (3%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+P +A  +       G   T++ Y  L     R  R      ++  +    ++P+
Sbjct: 113 LCRRGRPDDAERVVGAC---GPAATVVAYGALTDGYCRAGRLGDARRVVGGMP---VQPN 166

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +  +N +I+   E G V +A+ +   M   GC P   TYN L++         ++++L+ 
Sbjct: 167 AYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELID 226

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           LM + +   PN+ TYN+L+   C +  +++A  ++  + + G +P  V YNT+ +     
Sbjct: 227 LM-RAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSA 285

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                A++++ EM      PNE T  +++   C++G ++ A++ L +M +     N+V +
Sbjct: 286 ERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTY 345

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N++I G  + ++ DG    L+ M+ +G KPD+VT++T++    SA      +E+ D+M +
Sbjct: 346 NAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQ 405

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G  PD   F+ L     + G    A  +   M   G  PN + ++T+ISG   A K+ +
Sbjct: 406 NGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQ 465

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+ ++ +M   G NP+ K Y+ L     +      A + ++ +++ G+ P       +  
Sbjct: 466 ALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAI-- 522

Query: 424 SWRAIGLAREAK 435
               +GL R  K
Sbjct: 523 ---LLGLCRNGK 531



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 204/405 (50%), Gaps = 6/405 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G+  +A  + + ++  G  P ++TY  L+ A  + + ++  + LI  +  +G 
Sbjct: 174 IHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGC 233

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+++ +N +++     G+VD+A+++ + +   GCKP+T  YNT++KG  +  +  ++ +
Sbjct: 234 TPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADE 293

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L+  M ++ N  PN+ T+N+++ + C K  +++A  ++ KM   G   + VTYN +    
Sbjct: 294 LVTEMLRE-NCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGL 352

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A  +L +M++   +P+  T   ++ G C      DA   +  M +    P+ 
Sbjct: 353 CEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDN 412

Query: 241 VVFNSLIKGFLDIKD--SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           V FN+LI GFL  K    D ++     M + G  P+ +T+STI+   + A  + +  E+F
Sbjct: 413 VTFNTLI-GFLCQKGLMVDAIE-VFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELF 470

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           ++M   G  PD  ++ +LA+        ++A   +  ++  G+ P+ V++  ++ G C  
Sbjct: 471 NEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRN 529

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
            K + A+ I   M   G  P+  TY  L+ G         A ELL
Sbjct: 530 GKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 574



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 197/446 (44%), Gaps = 52/446 (11%)

Query: 36  VAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGC 95
           ++AL  +    + L L   VE     PD+ L N ++      G  D+A ++        C
Sbjct: 78  LSALVHRGDLDAALRL---VESSPRPPDAALANRLVRDLCRRGRPDDAERVV-----GAC 129

Query: 96  KP--TTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
            P  T   Y  L  GY   G+  ++ +++  M     V+PN  TYN L+   C +  + +
Sbjct: 130 GPAATVVAYGALTDGYCRAGRLGDARRVVGGMP----VQPNAYTYNPLIHTLCERGQVRD 185

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR-AEQMLFEMQNNQVRPNERTCGIIV 212
           A +V+  M+  G  PD VTYN L  A  + G  YR A +++  M+     PN  T  +++
Sbjct: 186 ALSVLDDMLCRGCAPDVVTYNILLEATCK-GRGYRQAMELIDLMRAEGCTPNNVTYNVLM 244

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
            G C EG+++DA+  L  +      P+ V +N+++KG    +     D+ +T M      
Sbjct: 245 DGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCP 304

Query: 273 PDVVTFSTIMDAWSSAGLM---------------------------GKCQE--------I 297
           P+  TF+ ++ +    GL+                           G C++        +
Sbjct: 305 PNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGL 364

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
              M   G +PDI  ++ L KG   A +   AE ++ +M + G  P+ V F T+I   C 
Sbjct: 365 LSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQ 424

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              M  A+ ++++M + G  PN  TY T++ G  +A +  +A EL   M  KG  P K  
Sbjct: 425 KGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDK-I 483

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEE 443
            QL+A+         EA + ++  ++
Sbjct: 484 YQLLAECLNDDDTIEEAIQTVRKLQD 509



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 165/380 (43%), Gaps = 11/380 (2%)

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           ++A    G++D A+++ +    S   P  +  N L++     G+P+++ +++        
Sbjct: 78  LSALVHRGDLDAALRLVES---SPRPPDAALANRLVRDLCRRGRPDDAERVVGACGPAAT 134

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           V      Y  L   +C    + +A  VV  M    +QP+A TYN L     + G+   A 
Sbjct: 135 VV----AYGALTDGYCRAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDAL 187

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            +L +M      P+  T  I++   CK      AM  +  M+     PN V +N L+ G 
Sbjct: 188 SVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGM 247

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
               D D   + L  +   G KP  V ++T++    SA   G   E+  +M++    P+ 
Sbjct: 248 CGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNE 307

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             F+++     R G  Q+A  +L  M K+G   N+V +  +I+G C    +  AM +  K
Sbjct: 308 ATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSK 367

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M   G  P++ TY TLL G   A Q   AEEL+  M + G  P   T   +       GL
Sbjct: 368 MKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGL 427

Query: 431 AREAKRVLKSAEEDRQSMPN 450
             +A  V K    D+   PN
Sbjct: 428 MVDAIEVFKQM-PDKGCTPN 446



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 117/225 (52%), Gaps = 7/225 (3%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +P ++TY TL+  L    ++     L+  + ++G  PD++ FN +I    + G + +A
Sbjct: 372 GCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDA 431

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +++F++M D GC P + TY+T+I G     K +++L+L   M   K   P D+ Y +L  
Sbjct: 432 IEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGH-KGFNP-DKIYQLLAE 489

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
                ++IEEA   V K+  SGI P  V YN +     + G+T  A  ++  M ++   P
Sbjct: 490 CLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMP 549

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           ++ T  I++ G   EG + +A   L ++   +     V+ NSLIK
Sbjct: 550 DDLTYVILIEGLAYEGYLNEARELLIKLCSRD-----VLVNSLIK 589


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 217/445 (48%), Gaps = 9/445 (2%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G +P LIT   L+       +     S+++K+ K G +P +I F  +I      G V++
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNK 147

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+    K+   G K    +Y TLI G   +G    ++KL++ +   +  KPN   YN ++
Sbjct: 148 ALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKID-GRLTKPNVEMYNTII 206

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
            A C    + EA+ +  +M A GI  D VTY TL   +    +   A  +L EM    + 
Sbjct: 207 DALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTIN 266

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL---DIKDSDGV 259
           PN  T  I+V   CKEG +++A   L  M +  V P+++ +++L+ G+    ++K +  V
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHV 326

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
             A++LM   GV PDV +++ +++ +    ++ +   +F +M +  + P I  +S L  G
Sbjct: 327 FNAMSLM---GVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG 383

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             ++G       ++  MR  G+  NV+ + ++I G C    + RA++++ KM + GI P 
Sbjct: 384 LCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPC 443

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             T+  LL G  +  +   A+E  Q +  KG         ++ +     GL  EA  +L 
Sbjct: 444 SFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLS 503

Query: 440 SAEEDRQSMPNKKD-EIAVESIHRK 463
             EE+   +PN    +I + ++ +K
Sbjct: 504 KMEEN-GCVPNAVTFDIIINALFKK 527



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 209/408 (51%), Gaps = 1/408 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  KG+ ++A +  + L+ +G +   ++Y TL+  + +    +  + L+ K++    KP+
Sbjct: 139 LCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPN 198

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             ++N +I+A  +   V EA  +F +M   G      TY TLI G+    K +E++ LL 
Sbjct: 199 VEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLN 258

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K + PN  TYNILV A C +  ++EA NV+  M+ + ++PD +TY+TL   Y   
Sbjct: 259 EMVL-KTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLV 317

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E  +A+ +   M    V P+  +  I+++G+CK   +++A+     M +  + P +V +
Sbjct: 318 YELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTY 377

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           +SLI G         V   +  M + G+  +V+T+++++D     G + +   +F+ M  
Sbjct: 378 SSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKD 437

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GI P    F+IL  G  + G  + A+     +   G H +V  +  +I+G C    ++ 
Sbjct: 438 QGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEE 497

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           A+++  KM E G  PN  T++ ++    +  +  +AE+LL+ M  +G+
Sbjct: 498 ALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/306 (22%), Positives = 143/306 (46%)

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           +N ++ ++        A ++ +++   GIQPD +T N L   +   G+      +L ++ 
Sbjct: 62  FNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
               +P+  T   ++ G C +G +  A+ F  ++    +  + V + +LI G   I D+ 
Sbjct: 122 KRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTR 181

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
           G  K +  ++    KP+V  ++TI+DA     L+ +   +F +M   GI  D+  ++ L 
Sbjct: 182 GAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLI 241

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            G+  A + ++A  +L  M    ++PNV  +  ++   C   K++ A ++   M +  + 
Sbjct: 242 YGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVK 301

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           P++ TY TL+ GY    +  +A+ +   M   GV P   +  ++ + +    +  EA  +
Sbjct: 302 PDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNL 361

Query: 438 LKSAEE 443
            K   +
Sbjct: 362 FKEMHQ 367



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 127/269 (47%), Gaps = 5/269 (1%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NILV     +GK  EA  +   +++   +P +ITY+TL+         K    + + +  
Sbjct: 273 NILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSL 332

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+ PD   +  +IN   ++  VDEA+ +F++M      P   TY++LI G    G+   
Sbjct: 333 MGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISY 392

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
              L+  M +D+ +  N  TYN L+   C    ++ A  +  KM   GI+P + T+  L 
Sbjct: 393 VWDLIDEM-RDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILL 451

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               + G    A++   ++       +     ++++G+CK+G +E+A+  L +M+E    
Sbjct: 452 DGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCV 511

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           PN V F+ +I       ++D  +K L  M
Sbjct: 512 PNAVTFDIIINALFKKDENDKAEKLLRQM 540



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 35/254 (13%)

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
           N++DA+    RM  +   P ++ FN ++  F  IK           +E  G++PD++T +
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
            +++ +   G +     +   ++K G +P    F+ L KG    G+  KA      +   
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQ 158

Query: 340 GV-----------------------------------HPNVVMFTTVISGWCNAVKMQRA 364
           G+                                    PNV M+ T+I   C    +  A
Sbjct: 159 GIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEA 218

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             ++ +M   GI+ ++ TY TL++G+  A +   A  LL  M  K + P   T  ++ D+
Sbjct: 219 YGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278

Query: 425 WRAIGLAREAKRVL 438
               G  +EAK VL
Sbjct: 279 LCKEGKVKEAKNVL 292


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 206/424 (48%), Gaps = 2/424 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
            F+ L  +G +P  ++YT+++  L +  R      L  ++E +   P +  +N MI    
Sbjct: 274 FFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYG 333

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
            +G  + A K+  ++K+ GC P+  ++N+++   G   K +E+L L + M +D   +PN 
Sbjct: 334 SAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKD--AEPNS 391

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TYNI++   C    +EEA+ +  +M  +G+ P+ +T N +     +  +   A +M   
Sbjct: 392 STYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFET 451

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
                  PN  T   ++ G  K+GN++DA R    M +   + N VV+ SLI+ F     
Sbjct: 452 ASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGR 511

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            +   K    M   G +PD+   +T MD    AG + K + IF+D+   G  PD+  +SI
Sbjct: 512 KEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSI 571

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  G  +AG+ ++  SI  +M++ G   +   +  V+ G+C + K+ +A  + E+M    
Sbjct: 572 LIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKR 631

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           + P + TY +++ G  +  +   A  L +  + KG+         + D +  +G   EA 
Sbjct: 632 VPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAY 691

Query: 436 RVLK 439
            +L+
Sbjct: 692 LILE 695



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 209/442 (47%), Gaps = 7/442 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L   GK  EA+ I + +   G  P L+T   +V  L + K+F+    +     + G 
Sbjct: 398 IDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGC 457

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+S+ + ++I+   + GNVD+A ++F+ M D+G       Y +LI+ +   G+ E+  K
Sbjct: 458 NPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHK 517

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M++ +  +P+    N  +        +E+   +   +   G  PD  +Y+ L    
Sbjct: 518 IFKEMNR-RGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGL 576

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+      +   M+      + R    +V G+CK G ++ A   L  MK   V P +
Sbjct: 577 TKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTV 636

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             + S+I G   I   D +D+A  L EE    G++ +V+ +S+++D +   G + +   I
Sbjct: 637 ATYGSIIDGLAKI---DRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLI 693

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            ++M+K G+ P+++ ++ L    V+A E  +A     SM++    PN   ++ +I+G C 
Sbjct: 694 LEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCR 753

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             K  +A   +++M + G+ PN+ TY T++ G  +      A  L +  +  G  P  ++
Sbjct: 754 VQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAAS 813

Query: 418 IQLVADSWRAIGLAREAKRVLK 439
              + +       A EA  V +
Sbjct: 814 FNALIEGMSHANRAIEAYHVFE 835



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/437 (23%), Positives = 198/437 (45%), Gaps = 2/437 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +P  A  +   + E G+   +  +TTLV AL R+ R +  L+L+ +V+   ++PD +L+N
Sbjct: 197 QPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYN 256

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
             I+   ++GNVD A K F ++K  G KP   +Y ++I      G+  E+ +L   M  +
Sbjct: 257 VCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETE 316

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           + V P    YN ++  + S    E A+ ++ ++   G  P  V++N++     +  +   
Sbjct: 317 RAV-PCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDE 375

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A   LFE       PN  T  II+   C  G +E+A      M+   + PNL+  N ++ 
Sbjct: 376 A-LTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVD 434

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
                K  +   +      + G  P+ VT+ +++D     G +     +F++M+  G   
Sbjct: 435 RLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNA 494

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           +  V++ L + +   G  +    I   M + G  P++ +  T +     A  +++  +I+
Sbjct: 495 NPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIF 554

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           E +   G  P++++Y  L+ G  +A Q      +   M+++G          V D +   
Sbjct: 555 EDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKS 614

Query: 429 GLAREAKRVLKSAEEDR 445
           G   +A  VL+  +  R
Sbjct: 615 GKLDKAYEVLEEMKVKR 631



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/409 (24%), Positives = 182/409 (44%), Gaps = 42/409 (10%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG   +A+ +F  +++ GH    + YT+L+       R +    +  ++ + G +PD  L
Sbjct: 474 KGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTL 533

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            N  ++   ++G+V++   IF+ +K  G  P   +Y+ LI G    G+  E+  +   M 
Sbjct: 534 LNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMK 593

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           Q +    + R YN +V  +C    +++A+ V+ +M    + P   TY             
Sbjct: 594 Q-QGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATY------------- 639

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
                                 G I+ G  K   +++A       K   +  N++V++SL
Sbjct: 640 ----------------------GSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSL 677

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           I GF  +     +D+A  ++EE    G+ P+V T++++MDA   A  + +    F  M +
Sbjct: 678 IDGFGKVGR---IDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKE 734

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
               P+ + +SIL  G  R  +  KA      M+K G+ PNVV +TT+I+G      +  
Sbjct: 735 MKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITD 794

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
           A S++E+    G  P+  ++  L+ G   A +   A  + +    KG R
Sbjct: 795 ACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCR 843



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 160/341 (46%), Gaps = 2/341 (0%)

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK 129
           +++A   +  +D+A ++   M+    +P  S Y  LI       +PE +L+LL+ M Q+ 
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQM-QEV 211

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
             +     +  LVRA   +  +E A  +V ++  S ++PD V YN     + + G    A
Sbjct: 212 GYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMA 271

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
            +   E+++  ++P++ +   ++   CK G + +A     +M+     P    +N++I G
Sbjct: 272 WKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMG 331

Query: 250 FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
           +      +   K L  ++E G  P VV+F++I+        + +   +F+ M K   EP+
Sbjct: 332 YGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM-KKDAEPN 390

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
              ++I+      AG+ ++A  I   M   G+ PN++    ++   C A K + A  ++E
Sbjct: 391 SSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFE 450

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
              + G NPN  TY +L+ G G+      A  L + M + G
Sbjct: 451 TASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTG 491



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 1/213 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA+ +F     +G    +I Y++L+    +  R      ++ ++ K G+ P+   +N+++
Sbjct: 654 EAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLM 713

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +A  ++  ++EA+  FQ MK+  C P T TY+ LI G   V K  ++    Q M Q + +
Sbjct: 714 DALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEM-QKQGL 772

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PN  TY  ++       +I +A ++  +  A+G  PDA ++N L    +       A  
Sbjct: 773 VPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYH 832

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           +  E +    R N + C  ++    K   +E A
Sbjct: 833 VFEETRLKGCRINVKACISLLDALNKAECLEQA 865



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 1/211 (0%)

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           PN   C  +VS   +   ++DA R +  M+ L+  P    +  LI    + +  +   + 
Sbjct: 146 PNP-ACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALEL 204

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           L  M+E G +  V  F+T++ A +  G +     + D++  + +EPDI ++++    + +
Sbjct: 205 LRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGK 264

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           AG    A      ++  G+ P+ V +T++I   C A ++  A  ++ +M      P    
Sbjct: 265 AGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYA 324

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           Y T++ GYG A Q   A +LL  ++E+G  P
Sbjct: 325 YNTMIMGYGSAGQFENAYKLLDQLKERGCIP 355



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/205 (18%), Positives = 90/205 (43%), Gaps = 1/205 (0%)

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           L+   +  +  D  ++ +  M     +P    ++ ++ A + A    +  E+   M + G
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
            E  + +F+ L +   R G  + A +++  ++   + P++V++   I  +  A  +  A 
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
             + ++   G+ P+  +Y +++W   +A +   AEEL   ME +   P       +   +
Sbjct: 273 KFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGY 332

Query: 426 RAIGLAREAKRVLKSAEEDRQSMPN 450
            + G    A ++L   +E R  +P+
Sbjct: 333 GSAGQFENAYKLLDQLKE-RGCIPS 356



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 27/159 (16%), Positives = 69/159 (43%)

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           D   ++K L  M   G        + ++ A      +   + +   M +    P    ++
Sbjct: 127 DLAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYT 186

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
           +L      A +P++A  +L  M++ G    V +FTT++       +++ A+++ +++   
Sbjct: 187 VLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGS 246

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            + P++  Y   +  +G+A     A +    ++ +G++P
Sbjct: 247 CLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKP 285


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 210/450 (46%), Gaps = 30/450 (6%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +++ +I +G  P ++TY  LV         K   SL+++++   + PD   FN +I+A  
Sbjct: 225 LYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALG 284

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G +  A  +   M  +  KP   TYN+LI GY  + K + +  +   M+Q   V PN 
Sbjct: 285 KEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQS-GVTPNV 343

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           RTY  ++   C +  ++EA ++  +M    + PD VTY +L     +     RA  +  +
Sbjct: 344 RTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKK 403

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M+   ++P+  +  I++   CK G +E+A  F  R+     H N+  +N +I G      
Sbjct: 404 MKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCK--- 460

Query: 256 SDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV---------- 302
           +D   +A+ L   ME  G  PD +TF TI+ A        K ++I  +M+          
Sbjct: 461 ADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKV 520

Query: 303 -------------KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
                        KA I+PD+  +  L  GY    E + A+ +  SM + GV PNV  +T
Sbjct: 521 RLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYT 580

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
            +I G C    +  AMS++E+M    + PN+ TY +L+    +     RA  LL+ M+E 
Sbjct: 581 IMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEH 640

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           G++P   +  ++ D     G    AK + +
Sbjct: 641 GIQPDVYSYTILLDGLCKSGRLEGAKEIFQ 670



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 122/500 (24%), Positives = 232/500 (46%), Gaps = 72/500 (14%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  +A Y  + ++ +G +   ++Y TL+  L +    K++  L+ K+E   +KPD
Sbjct: 143 LCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPD 202

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++N +I++  ++  + +A  ++ +M   G  P   TYN L+ G+  +G  +E+  LL 
Sbjct: 203 VVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLN 262

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   KN+ P+  T+N L+ A   +  ++ A  V+  M+ + I+PD VTYN+L   Y   
Sbjct: 263 EMKL-KNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFL 321

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +   A+ + + M  + V PN RT   ++ G CKE  +++AM     MK   + P++V +
Sbjct: 322 NKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTY 381

Query: 244 NSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            SLI G      +  +++A+ L   M+E G++PDV +++ ++DA    G +   +E F  
Sbjct: 382 TSLIDGLC---KNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQR 438

Query: 301 MVKAGIEPDIHVFSILAKGYVRA-----------------------------------GE 325
           ++  G   ++  ++++  G  +A                                    E
Sbjct: 439 LLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDE 498

Query: 326 PQKAESILTSMRKYG-----------------------VHPNVVMFTTVISGWCNAVKMQ 362
             KAE IL  M   G                       + P+VV + T++ G+    +++
Sbjct: 499 NDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELK 558

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A  ++  M ++G+ PN++ Y  ++ G  + K    A  L + M+ K + P   T   + 
Sbjct: 559 HAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLI 618

Query: 423 DSW-------RAIGLAREAK 435
           D+        RAI L +E K
Sbjct: 619 DALCKNHHLERAIALLKEMK 638



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 214/429 (49%), Gaps = 30/429 (6%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K   A Y+F  + + G  P + TYTT++  L ++K     +SL  +++   M PD + + 
Sbjct: 323 KVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYT 382

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           ++I+   ++ +++ A+ + +KMK+ G +P   +Y  L+      G+ E + +  Q +   
Sbjct: 383 SLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLV- 441

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K    N +TYN+++   C  +   EA ++  KM   G  PDA+T+ T+  A  +  E  +
Sbjct: 442 KGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDK 501

Query: 189 AEQMLFEM------QNNQVR-----------------PNERTCGIIVSGYCKEGNMEDAM 225
           AE++L EM      +  +VR                 P+  T G ++ GY     ++ A 
Sbjct: 502 AEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAK 561

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIM 282
              Y M ++ V PN+  +  +I G    K    VD+A++L EE   K   P++VT+++++
Sbjct: 562 YVFYSMAQMGVTPNVQCYTIMIDGLCKKKT---VDEAMSLFEEMKHKNMFPNIVTYTSLI 618

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
           DA      + +   +  +M + GI+PD++ ++IL  G  ++G  + A+ I   +   G H
Sbjct: 619 DALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYH 678

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
            NV ++T +I+  C A     A+ +  KM + G  P+  T++ ++W   E  +  +AE++
Sbjct: 679 LNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKI 738

Query: 403 LQVMEEKGV 411
           L  M  +G+
Sbjct: 739 LXEMIARGL 747



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 205/435 (47%), Gaps = 7/435 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P    +  ++++L   K + +++SL  K E +G  PD    N ++N      ++  A  +
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-QLMSQDKNVKPNDRTYNILVRAW 145
              +   G  P   T NTLIKG    G+ +++L    Q+++Q    + N  +Y  L+   
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQ--GFQLNQVSYRTLINGL 178

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C     +    ++ K+    ++PD V YNT+  +  +      A  +  EM    + PN 
Sbjct: 179 CKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNV 238

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   +V G+C  G++++A   L  MK   ++P++  FN+LI               L +
Sbjct: 239 VTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAV 298

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M +  +KPDVVT+++++D +     +   + +F  M ++G+ P++  ++ +  G  +   
Sbjct: 299 MMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKM 358

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A S+   M+   + P++V +T++I G C    ++RA+++ +KM E GI P++ +Y  
Sbjct: 359 VDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTI 418

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
           LL    +  +   A+E  Q +  KG      T  ++ +      L  EA   LKS  E +
Sbjct: 419 LLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMD-LKSKMEGK 477

Query: 446 QSMPNKKDEIAVESI 460
             MP   D I  ++I
Sbjct: 478 GCMP---DAITFKTI 489



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/437 (23%), Positives = 201/437 (45%), Gaps = 19/437 (4%)

Query: 3   ILVGKGKPHEAH--YIFNCLIEEGHRPTLI----------------TYTTLVAALTRQKR 44
           +L+ +  P   H  YI + L+   H PT+I                T   L+        
Sbjct: 54  MLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTH 113

Query: 45  FKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNT 104
                S+++ + K G  P++I  N +I      G + +A+    ++   G +    +Y T
Sbjct: 114 ITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRT 173

Query: 105 LIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS 164
           LI G    G+ +   +LL+ + +  +VKP+   YN ++ + C    + +A ++  +M+  
Sbjct: 174 LINGLCKTGETKAVARLLRKL-EGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVK 232

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           GI P+ VTYN L   +   G    A  +L EM+   + P+  T   ++    KEG M+ A
Sbjct: 233 GISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAA 292

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
              L  M +  + P++V +NSLI G+  +            M + GV P+V T++T++D 
Sbjct: 293 KIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDG 352

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
                ++ +   +F++M    + PDI  ++ L  G  +    ++A ++   M++ G+ P+
Sbjct: 353 LCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPD 412

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
           V  +T ++   C   +++ A   ++++   G + N++TY  ++ G  +A     A +L  
Sbjct: 413 VYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKS 472

Query: 405 VMEEKGVRPKKSTIQLV 421
            ME KG  P   T + +
Sbjct: 473 KMEGKGCMPDAITFKTI 489



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 196/410 (47%), Gaps = 13/410 (3%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G+ P  IT  TL+  L  +   K  L    +V   G + + + +  +IN   ++G 
Sbjct: 124 ILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGE 183

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
                ++ +K++    KP    YNT+I          ++  L   M   K + PN  TYN
Sbjct: 184 TKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIV-KGISPNVVTYN 242

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            LV  +C    ++EA++++ +M    I PD  T+NTL  A  + G+   A+ +L  M   
Sbjct: 243 ALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKA 302

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            ++P+  T   ++ GY     +++A    Y M +  V PN+  + ++I G    K    V
Sbjct: 303 CIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEK---MV 359

Query: 260 DKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           D+A++L EE   K   PD+VT+++++D       + +   +   M + GI+PD++ ++IL
Sbjct: 360 DEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTIL 419

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
                + G  + A+     +   G H NV  +  +I+G C A     AM +  KM   G 
Sbjct: 420 LDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGC 479

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVM------EEKGVRPKKSTIQL 420
            P+  T++T++    E  +  +AE++L+ M      E + VR K++ I L
Sbjct: 480 MPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVL 529



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 153/332 (46%), Gaps = 30/332 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+   A   F  L+ +G+   + TY  ++  L +   F   + L SK+E  G 
Sbjct: 420 LDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGC 479

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGC-----------------------KP 97
            PD+I F  +I A  E    D+A KI ++M   G                        KP
Sbjct: 480 MPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKP 539

Query: 98  TTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
              TY TL+ GY  V + + +  +   M+Q   V PN + Y I++   C K +++EA ++
Sbjct: 540 DVVTYGTLMDGYFLVNELKHAKYVFYSMAQ-MGVTPNVQCYTIMIDGLCKKKTVDEAMSL 598

Query: 158 VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
             +M    + P+ VTY +L  A  +     RA  +L EM+ + ++P+  +  I++ G CK
Sbjct: 599 FEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCK 658

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPD 274
            G +E A     R+     H N+ V+ ++I    ++  +   D+AL L   ME+ G  PD
Sbjct: 659 SGRLEGAKEIFQRLLVKGYHLNVQVYTAMIN---ELCKAGLFDEALDLQXKMEDKGCMPD 715

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
            VTF  I+ A        K ++I  +M+  G+
Sbjct: 716 AVTFDIIIWALFEKDENDKAEKILXEMIARGL 747



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 87/166 (52%), Gaps = 1/166 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  K    EA  +F  +  +   P ++TYT+L+ AL +    +  ++L+ ++++ G++PD
Sbjct: 586 LCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPD 645

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +  +++   +SG ++ A +IFQ++   G       Y  +I      G  +E+L L Q
Sbjct: 646 VYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDL-Q 704

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
              +DK   P+  T++I++ A   K+  ++A  ++ +M+A G+  +
Sbjct: 705 XKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLMKE 750


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 199/457 (43%), Gaps = 36/457 (7%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           FN ++     P+ + +T L+ ++ + K + ++LSL ++++  G+ PD    N +IN+   
Sbjct: 100 FNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCH 159

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
              +  A  +  K+   GC+P                                    ++ 
Sbjct: 160 LRRLGYAFSVLAKLLKLGCQP------------------------------------DNT 183

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           T+N L+R  C +  I EA ++  K +  G QPD VTY TL     + G T  A ++L  M
Sbjct: 184 TFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSM 243

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
                RPN      I+   CK+  + +A      M    + P++  +NSLI    ++ + 
Sbjct: 244 VQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEW 303

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
             V   L  M    + P+VV FST++DA    G++    ++ D M+K G+EPD+  ++ L
Sbjct: 304 KHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTAL 363

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G+    E  +A  +  +M   G  PNV  +  +I+G+C   +M +AM + E+M   G+
Sbjct: 364 MDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGL 423

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
             +  TY TL+ G     +   A  L   M   G  P   T +++ D         EA  
Sbjct: 424 IADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMV 483

Query: 437 VLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF 473
           +LK+ E            IA++ + R   L A+   F
Sbjct: 484 LLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLF 520



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 177/387 (45%), Gaps = 1/387 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P + T   L+ +    +R     S+++K+ K G +PD+  FN +I      G + EA
Sbjct: 142 GIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEA 201

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +F K    G +P   TY TL+ G   VG    +++LL+ M Q KN +PN   YN ++ 
Sbjct: 202 LHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQ-KNCRPNVIAYNTIID 260

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C    + EA+N+  +M+  GI PD  TYN+L  A     E      +L EM N+++ P
Sbjct: 261 SLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMP 320

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N      +V   CKEG +  A   +  M +  V P++V + +L+ G     + D   K  
Sbjct: 321 NVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVF 380

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M   G  P+V +++ +++ +     M K   + + M   G+  D   ++ L  G    
Sbjct: 381 DTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHV 440

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G  Q A ++   M   G  P++V +  ++   C    +  AM + + +    ++ ++  Y
Sbjct: 441 GRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVY 500

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKG 410
              + G   A +   A +L   +  +G
Sbjct: 501 NIAIDGMCRAGELEAARDLFSNLSCQG 527



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 166/340 (48%), Gaps = 7/340 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA ++F+  I EG +P ++TY TL+  L +     + + L+  + +   +P+
Sbjct: 192 LCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPN 251

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I +N +I++  +   V EA  +F +M   G  P   TYN+LI    N+ + +    LL 
Sbjct: 252 VIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLN 311

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K + PN   ++ +V A C +  I  A +VV  M+  G++PD VTY  L   +   
Sbjct: 312 EMVNSK-IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLR 370

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E   A ++   M +    PN R+  I+++GYC+   M+ AM  L +M    +  + V +
Sbjct: 371 SEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTY 430

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N+LI G   +     +  A+ L  E    G  PD+VT+  ++D       + +   +   
Sbjct: 431 NTLIHGLCHVGR---LQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKA 487

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           +  + ++ DI V++I   G  RAGE + A  + +++   G
Sbjct: 488 IEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQG 527



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 123/285 (43%), Gaps = 38/285 (13%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L   G    A  +   ++++  RP +I Y T++ +L + ++     +L S++   G+
Sbjct: 224 MNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGI 283

Query: 61  KPDSILFNAMINA------------------------------------CSESGNVDEAM 84
            PD   +N++I+A                                    C E G +  A 
Sbjct: 284 SPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKE-GMIAIAH 342

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
            +   M   G +P   TY  L+ G+    + +E++K+   M   K   PN R+YNIL+  
Sbjct: 343 DVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH-KGCVPNVRSYNILING 401

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +C    +++A  ++ +M   G+  D VTYNTL       G    A  +  EM  +   P+
Sbjct: 402 YCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPD 461

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
             T  I++   CK  ++ +AM  L  ++   +  +++V+N  I G
Sbjct: 462 LVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDG 506



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/329 (21%), Positives = 141/329 (42%), Gaps = 41/329 (12%)

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
           N++++A +   +M+     P  V +  L  + A+         +  +M +  + P+  T 
Sbjct: 91  NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 150

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
            I+++ +C    +  A   L ++ +L   P+   FN+LI+G L ++   G  +AL L ++
Sbjct: 151 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRG-LCVEGKIG--EALHLFDK 207

Query: 269 F---GVKPDVVTFSTIMDAWSSAG---------------------------LMGKCQE-- 296
               G +PDVVT+ T+M+     G                           +   C++  
Sbjct: 208 TIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQ 267

Query: 297 ------IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
                 +F +M+  GI PDI  ++ L        E +   ++L  M    + PNVV+F+T
Sbjct: 268 VTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFST 327

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           V+   C    +  A  + + M + G+ P++ TY  L+ G+    +   A ++   M  KG
Sbjct: 328 VVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKG 387

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             P   +  ++ + +  I    +A  +L+
Sbjct: 388 CVPNVRSYNILINGYCQIQRMDKAMGLLE 416


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 200/392 (51%), Gaps = 1/392 (0%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           ++  L+         +    L+ ++ + G  P+ +++  +I+ C + G +++A  +F +M
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
              G      TY  LI G    G  ++  ++ + M +D  V PN  TYN ++   C    
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQED-GVFPNLYTYNCVMNQLCKDGR 283

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
            ++A+ V  +M   G+  + VTYNTL     +  +   A +++ +M+++ + PN  T   
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++ G+C  G +  A+     +K   + P+LV +N L+ GF    D+ G  K +  MEE G
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           +KP  VT++ ++D ++ +  M K  ++   M + G+ PD+H +S+L  G+   G+  +A 
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +  SM +    PN V++ T+I G+C      RA+ + ++M E  + PN+ +Y  ++   
Sbjct: 464 RLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVL 523

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            + ++   AE L++ M + G+ P  S + L++
Sbjct: 524 CKERKSKEAERLVEKMIDSGIDPSTSILSLIS 555



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 209/426 (49%), Gaps = 8/426 (1%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           FN +++ G  P    +  L+  +     F    S  ++  K  +  D   F  +I  C E
Sbjct: 117 FNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSFGILIKGCCE 175

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
           +G ++++  +  ++ + G  P    Y TLI G    G+ E++  L   M +   +  N+R
Sbjct: 176 AGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGK-LGLVANER 234

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           TY +L+         ++ + +  KM   G+ P+  TYN +     + G T  A Q+  EM
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
           +   V  N  T   ++ G C+E  + +A + + +MK   ++PNL+ +N+LI GF  +   
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK- 353

Query: 257 DGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
             + KAL+L  +    G+ P +VT++ ++  +   G      ++  +M + GI+P    +
Sbjct: 354 --LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           +IL   + R+   +KA  +  SM + G+ P+V  ++ +I G+C   +M  A  +++ M E
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
               PN   Y T++ GY +    +RA +LL+ MEEK + P  ++ + + +       ++E
Sbjct: 472 KNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKE 531

Query: 434 AKRVLK 439
           A+R+++
Sbjct: 532 AERLVE 537



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 111/448 (24%), Positives = 211/448 (47%), Gaps = 8/448 (1%)

Query: 8   GKPHEAHYIFNCLIE-----EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           GK H   +  + L+      E  +     Y  ++ +  + +     +S  +++  +G  P
Sbjct: 68  GKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVP 127

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
            S  FN ++     S + ++    F + K S       ++  LIKG    G+ E+S  LL
Sbjct: 128 GSNCFNYLLTFVVGSSSFNQWWSFFNENK-SKVVLDVYSFGILIKGCCEAGEIEKSFDLL 186

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             +++     PN   Y  L+   C K  IE+A ++ ++M   G+  +  TY  L     +
Sbjct: 187 IELTE-FGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G   +  +M  +MQ + V PN  T   +++  CK+G  +DA +    M+E  V  N+V 
Sbjct: 246 NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVT 305

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +N+LI G       +  +K +  M+  G+ P+++T++T++D +   G +GK   +  D+ 
Sbjct: 306 YNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLK 365

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G+ P +  ++IL  G+ R G+   A  ++  M + G+ P+ V +T +I  +  +  M+
Sbjct: 366 SRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNME 425

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
           +A+ +   M E+G+ P++ TY  L+ G+    Q   A  L + M EK   P +     + 
Sbjct: 426 KAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMI 485

Query: 423 DSWRAIGLAREAKRVLKSAEEDRQSMPN 450
             +   G +  A ++LK  EE ++  PN
Sbjct: 486 LGYCKEGSSYRALKLLKEMEE-KELAPN 512



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 158/319 (49%), Gaps = 1/319 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G   +   ++  + E+G  P L TY  ++  L +  R K    +  ++ + G+
Sbjct: 240 INGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV 299

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             + + +N +I        ++EA K+  +MK  G  P   TYNTLI G+  VGK  ++L 
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + + + + + P+  TYNILV  +C K     A  +V +M   GI+P  VTY  L   +
Sbjct: 360 LCRDL-KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+     +A Q+   M+   + P+  T  +++ G+C +G M +A R    M E    PN 
Sbjct: 419 ARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNE 478

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V++N++I G+     S    K L  MEE  + P+V ++  +++         + + + + 
Sbjct: 479 VIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEK 538

Query: 301 MVKAGIEPDIHVFSILAKG 319
           M+ +GI+P   + S++++ 
Sbjct: 539 MIDSGIDPSTSILSLISRA 557



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 147/293 (50%), Gaps = 1/293 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L   G+  +A  +F+ + E G    ++TY TL+  L R+ +      ++ +++ DG+
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I +N +I+     G + +A+ + + +K  G  P+  TYN L+ G+   G    + K
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +++ M +++ +KP+  TY IL+  +   +++E+A  +   M   G+ PD  TY+ L   +
Sbjct: 395 MVKEM-EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF 453

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G+   A ++   M      PNE     ++ GYCKEG+   A++ L  M+E E+ PN+
Sbjct: 454 CIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNV 513

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
             +  +I+     + S   ++ +  M + G+ P     S I  A + + +  K
Sbjct: 514 ASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRAKNDSHVSSK 566



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 81/385 (21%), Positives = 161/385 (41%), Gaps = 73/385 (18%)

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           S  LL  +++ +  K   R Y +++ ++    S+  + +   +MV +G  P +  +N L 
Sbjct: 77  SSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLL 136

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
             +     ++      F    ++V  +  + GI++ G C+ G +E +             
Sbjct: 137 -TFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKS------------- 182

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
                F+ LI+                 + EFG  P+VV ++T++D     G + K +++
Sbjct: 183 -----FDLLIE-----------------LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDL 220

Query: 298 FDDMVKA-----------------------------------GIEPDIHVFSILAKGYVR 322
           F +M K                                    G+ P+++ ++ +     +
Sbjct: 221 FFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK 280

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G  + A  +   MR+ GV  N+V + T+I G C  +K+  A  + ++M   GINPNL T
Sbjct: 281 DGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLIT 340

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           Y TL+ G+    +  +A  L + ++ +G+ P   T  ++   +   G    A +++K  E
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400

Query: 443 EDRQSMPNKKD-EIAVESIHRKQNL 466
           E R   P+K    I +++  R  N+
Sbjct: 401 E-RGIKPSKVTYTILIDTFARSDNM 424


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 207/414 (50%), Gaps = 8/414 (1%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGM-KPDSILFNAMINACSESGNVDEAMKIFQ 88
           +T+TTL+  L  + + K  + L  K+ ++ + +PD +++  +++   + G+  +A  + +
Sbjct: 143 VTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLR 202

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
            M+    KP T  YN +I  +   G  + +  LL  M Q KN+ P+  TY  L+      
Sbjct: 203 LMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQ-KNIPPDIITYTSLIDGLGKL 261

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
           +  E+   +  +M+   I PD  T+N++     + G+   AE+++  M    V PNE T 
Sbjct: 262 SQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITY 321

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
            +++ GYC  G M  A R    M +  + P+++ + +LI G+++ K    +DKA+ L  E
Sbjct: 322 NVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKK---MDKAMQLFRE 378

Query: 269 F---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
               G+KP +VT S ++      G     +  FD+M  AG  P+++    L  GY + G 
Sbjct: 379 ISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGL 438

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            ++A S    + +     N+ ++T VI+G C   K+ +A + +EK+  IG++P++ TY  
Sbjct: 439 VEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTA 498

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           ++ GY +      A+++L+ ME+ G  P   T  ++   +       E K  LK
Sbjct: 499 MISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLK 552



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 113/502 (22%), Positives = 219/502 (43%), Gaps = 35/502 (6%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F  ++     P+ ++++ L+ AL   K + S++S+  ++ K  +  D+   + ++
Sbjct: 55  DAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTVV 114

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N+C      D    +       G      T+ TLI+G     K ++++ L + + ++   
Sbjct: 115 NSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENIC 174

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +P++  Y  ++   C K   ++A++++  M     +PD   YN +  A+ + G    A  
Sbjct: 175 EPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATS 234

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L EM+   + P+  T   ++ G  K    E        M  L ++P++  FNS+I G  
Sbjct: 235 LLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLC 294

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                +  ++ +T M E GV+P+ +T++ +MD +   G MG+ + IFD M+  GIEPDI 
Sbjct: 295 KEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDII 354

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++ L  GYV   +  KA  +   + + G+ P++V  + ++ G     + + A   +++M
Sbjct: 355 SYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEM 414

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK---------------------- 409
              G  PNL T+ TLL GY +      A      +E +                      
Sbjct: 415 QAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKL 474

Query: 410 -------------GVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIA 456
                        G+ P   T   +   +   GL  EAK +L+  E++     N+   + 
Sbjct: 475 DKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVI 534

Query: 457 VESIHRKQNLSASNSTFLQIPG 478
           V    R   +S   +   +I G
Sbjct: 535 VRGFFRSSKVSEMKAFLKEIAG 556



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/421 (22%), Positives = 211/421 (50%), Gaps = 2/421 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEG-HRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           L  + K  +A ++F  L+ E    P  + Y T++  L ++   +    L+  +E+   KP
Sbjct: 152 LFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKP 211

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D+ ++N +I+A  + G +D A  +  +MK     P   TY +LI G G + + E+ ++ L
Sbjct: 212 DTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEK-VRTL 270

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
            L     N+ P+  T+N ++   C +  +E+A  ++  M+  G++P+ +TYN +   Y  
Sbjct: 271 FLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCL 330

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+  RA ++   M +  + P+  +   +++GY ++  M+ AM+    + +  + P++V 
Sbjct: 331 RGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVT 390

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
            + L++G  ++  ++        M+  G  P++ T  T++  +   GL+ +    F  + 
Sbjct: 391 CSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLE 450

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           +   + +I +++ +  G  + G+  KA +    +   G+HP+V+ +T +ISG+C    + 
Sbjct: 451 RRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLD 510

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A  +  KM + G  P+ +TY  ++ G+  + +    +  L+ +  K    + +T++L+ 
Sbjct: 511 EAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLM 570

Query: 423 D 423
           D
Sbjct: 571 D 571



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 1/175 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+   A   F+ +   GH P L T+ TL+    +    +  +S   K+E+     +  ++
Sbjct: 402 GRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIY 461

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            A+IN   ++G +D+A   F+K+   G  P   TY  +I GY   G  +E+  +L+ M +
Sbjct: 462 TAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKM-E 520

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           D    P++RTYN++VR +   + + E    + ++       +A T   L    A+
Sbjct: 521 DNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMDIIAE 575



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/313 (21%), Positives = 114/313 (36%), Gaps = 80/313 (25%)

Query: 207 TCGIIVSGYCKEGN-------MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           TC I V G     N       ++DA     +M   +  P+ V F+ L+K  + +K    V
Sbjct: 32  TCSISVKGNFGVSNEFENVKCLDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSV 91

Query: 260 -----------------------------------DKALTLMEEFGVKPDVVTFSTIMDA 284
                                                 L +  + G+  + VTF+T++  
Sbjct: 92  VSIFREIHKLRIPVDAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRG 151

Query: 285 WSSAGLMGKCQEIFDDMVKAGI-EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
             +   +     +F  +V+  I EPD  ++  +  G  + G  QKA  +L  M +    P
Sbjct: 152 LFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKP 211

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR----- 398
           +  ++  VI  +C    +  A S+  +M +  I P++ TY +L+ G G+  Q W      
Sbjct: 212 DTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQ-WEKVRTL 270

Query: 399 -------------------------------AEELLQVMEEKGVRPKKSTIQLVADSWRA 427
                                          AEE++  M EKGV P + T  +V D +  
Sbjct: 271 FLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCL 330

Query: 428 IGLAREAKRVLKS 440
            G    A+R+  S
Sbjct: 331 RGQMGRARRIFDS 343



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 1/89 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  +AH  F  L   G  P +ITYT +++   ++        ++ K+E +G 
Sbjct: 465 INGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGC 524

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQK 89
            PD+  +N ++     S  V E MK F K
Sbjct: 525 LPDNRTYNVIVRGFFRSSKVSE-MKAFLK 552


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 216/424 (50%), Gaps = 5/424 (1%)

Query: 2   NILVG---KGKP-HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N+L+    KGK  ++A  +F+ ++     P+LITY TL+    +    +    +  +++ 
Sbjct: 218 NVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKA 277

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
           D ++P  I FN ++    ++G V++A  + ++MKD G  P   T++ L  GY +  K E 
Sbjct: 278 DHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEA 337

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +L + +  + D  VK N  T +IL+ A C +  IE+A  ++ + +A G+ P+ V YNT+ 
Sbjct: 338 ALGVYE-TAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI 396

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
             Y + G+   A   +  M+   ++P+      ++  +C+ G ME+A + + +MK   V 
Sbjct: 397 DGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVS 456

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P++  +N LI G+    + D     L  ME+ G  P+VV++ T+++       + + Q +
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIV 516

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
             DM   G+ P + ++++L  G    G+ + A      M K G+  N+V + T+I G   
Sbjct: 517 KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSM 576

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             K+  A  +  ++   G+ P++ TY +L+ GYG A    R   L + M+  G++P   T
Sbjct: 577 TGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKT 636

Query: 418 IQLV 421
             L+
Sbjct: 637 YHLL 640



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 196/446 (43%), Gaps = 41/446 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +GK  +A  I    + +G  P  + Y T++    R+         I  +EK GM
Sbjct: 361 LNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM 420

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD + +N +I    E G ++ A K   KMK  G  P+  TYN LI GYG   + ++   
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480

Query: 121 LLQLMS----------------------------------QDKNVKPNDRTYNILVRAWC 146
           +L+ M                                   +D+ V P  R YN+L+   C
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC 540

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           SK  IE+A+    +M+  GI+ + VTYNTL    +  G+   AE +L E+    ++P+  
Sbjct: 541 SKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVF 600

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   ++SGY   GN++  +     MK   + P L  ++ LI     +   +G++    L 
Sbjct: 601 TYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI----SLCTKEGIELTERLF 656

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            E  +KPD++ ++ ++  ++  G M K   +   M++  I  D   ++ L  G ++ G+ 
Sbjct: 657 GEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKL 716

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +  S++  M    + P    +  ++ G C       A   Y +M E G   ++     L
Sbjct: 717 CEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNEL 776

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVR 412
           + G    K+ WR++E   V+ E   R
Sbjct: 777 VSGL---KEEWRSKEAEIVISEMNGR 799



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 177/387 (45%), Gaps = 7/387 (1%)

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK-LLQ 123
           +L + ++N   ES  + EA  +F  +++ G  P++ +   L+       +   ++   L 
Sbjct: 113 LLLSVLLN---ESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLN 169

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           ++  D   +P+   Y   ++A    + + +   +  +M    I P    YN L     + 
Sbjct: 170 ILESD--FRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKG 227

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                AEQ+  EM   ++ P+  T   ++ GYCK GN E + +   RMK   + P+L+ F
Sbjct: 228 KRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITF 287

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+L+KG       +  +  L  M++ G  PD  TFS + D +SS         +++  V 
Sbjct: 288 NTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD 347

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           +G++ + +  SIL     + G+ +KAE IL      G+ PN V++ T+I G+C    +  
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVG 407

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A    E M + G+ P+   Y  L+  + E  +   AE+ +  M+ KGV P   T  ++  
Sbjct: 408 ARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIG 467

Query: 424 SWRAIGLAREAKRVLKSAEEDRQSMPN 450
            +       +   +LK   ED  +MPN
Sbjct: 468 GYGRKYEFDKCFDILKEM-EDNGTMPN 493


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 204/416 (49%), Gaps = 1/416 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
            G  P++ T   ++ +L ++++     S    +   G+ PD   FN ++NA  E G    
Sbjct: 134 RGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKN 193

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A  + +KM++SG  PT  TYNTL+  Y   G+ + + +L+  M+  K +  +  TYN+ +
Sbjct: 194 AGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMAS-KGIGVDVCTYNVFI 252

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
              C  +   + + ++ +M  + + P+ +TYNTL   + + G+   A ++  EM    + 
Sbjct: 253 DNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLL 312

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           PN  T   +++G+C  GN+ +A+R +  M    + PN V + +L+ G     +   V   
Sbjct: 313 PNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSI 372

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           L  M   GV+   ++++ ++D     G++ +  ++ DDM+K  + PD+  FS+L  G+ R
Sbjct: 373 LERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFR 432

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G+   A+ I+  M K G+ PN ++++T+I  +C    ++ A++ Y  M   G   +  T
Sbjct: 433 VGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFT 492

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
              L+  +    +   AE  +  M   G+ P   T   + + +   G A +A  V 
Sbjct: 493 CNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVF 548



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 200/390 (51%), Gaps = 3/390 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +GK   A ++   + E G  PT +TY TL+    ++ R+K+   LI  +   G+
Sbjct: 182 LNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGI 241

Query: 61  KPDSILFNAMI-NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
             D   +N  I N C +S +    + + ++M+ +   P   TYNTLI G+   GK E + 
Sbjct: 242 GVDVCTYNVFIDNLCRDSRSAKGYL-LLKRMRRNMVYPNEITYNTLISGFVREGKIEVAT 300

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K+   MS   N+ PN  TYN L+   C+  +I EA  ++  MV+ G++P+ VTY  L   
Sbjct: 301 KVFDEMSL-FNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNG 359

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             +  E      +L  M+   VR +  +   ++ G CK G +E+A++ L  M ++ V+P+
Sbjct: 360 LYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPD 419

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +V F+ LI GF  +   +   + +  M + G+ P+ + +ST++  +   G + +    + 
Sbjct: 420 VVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYA 479

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            M  +G   D    ++L   + R G+ ++AE  +  M + G+ PN V F  +I+G+ N+ 
Sbjct: 480 VMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSG 539

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
              +A S+++KM   G  P+L TY  LL G
Sbjct: 540 DALKAFSVFDKMNSFGHFPSLFTYGGLLKG 569



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 175/369 (47%), Gaps = 1/369 (0%)

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
           +F+ +I  C  +  V +A++ F  M   G  P+  T N ++       K +      + M
Sbjct: 107 VFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGM 166

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
              K + P+  T+NIL+ A C +   + A  ++ KM  SG+ P AVTYNTL   Y + G 
Sbjct: 167 LA-KGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGR 225

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A Q++  M +  +  +  T  + +   C++         L RM+   V+PN + +N+
Sbjct: 226 YKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNT 285

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           LI GF+     +   K    M  F + P+ +T++T++    + G +G+   + D MV  G
Sbjct: 286 LISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHG 345

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + P+   +  L  G  +  E     SIL  MR  GV  + + +T +I G C    ++ A+
Sbjct: 346 LRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAV 405

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            + + M ++ +NP++ T+  L+ G+    +   A+E++  M + G+ P       +  ++
Sbjct: 406 QLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNY 465

Query: 426 RAIGLAREA 434
             +G  +EA
Sbjct: 466 CKMGYLKEA 474



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 120/503 (23%), Positives = 217/503 (43%), Gaps = 17/503 (3%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA   +  +   GH     T   LVA   R  + +     ++ + + G+ P+S+ F
Sbjct: 469 GYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTF 528

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +IN    SG+  +A  +F KM   G  P+  TY  L+KG    G   E+LK    +  
Sbjct: 529 DCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRC 588

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
             N   N   +N  + + C   ++ +A  ++ +MV +   PD  TY  L     + G+  
Sbjct: 589 IPNAVDN-VIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIV 647

Query: 188 RAEQMLFE-MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            A  +  + ++   + PN      +V G  K G+   A+     M   +V P+ V FN +
Sbjct: 648 AALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVI 707

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I  +     +  V+  L+ M+   +  ++ T++ ++  ++    M +C  ++ DM++ G 
Sbjct: 708 IDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGF 767

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD   +  L  GY ++     A  IL  +   G   +   F  +I+ +C   +M++A  
Sbjct: 768 LPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFE 827

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP-KKSTIQLVADSW 425
           + ++M +  + PN+ TY  L  G        +A  +LQV+ E G  P  K  I L+    
Sbjct: 828 LVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMC 887

Query: 426 R------AIGLAREAKRVLKSAEEDRQS-----MPNKK---DEIAVESIHRKQNLSASNS 471
           R      A+ L  E K +  S+     S     + N K   + I V  +  +  +  + +
Sbjct: 888 RVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVA 947

Query: 472 TFLQIPGVVSSEHNGSSAAKIRS 494
           TF  +  V   E N + A ++RS
Sbjct: 948 TFTTLMHVYCKEANVAKALELRS 970



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/511 (20%), Positives = 203/511 (39%), Gaps = 72/511 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    KG+   A  + +C+  +G    + TY   +  L R  R      L+ ++ ++ +
Sbjct: 217 LNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMV 276

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I +N +I+     G ++ A K+F +M      P + TYNTLI G+   G   E+L+
Sbjct: 277 YPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALR 336

Query: 121 LLQLMSQDKNVKPNDRTYNIL-----------------------------------VRAW 145
           L+ +M     ++PN+ TY  L                                   +   
Sbjct: 337 LMDVMVS-HGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGL 395

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN- 204
           C    +EEA  ++  M+   + PD VT++ L   + + G+   A++++ +M    + PN 
Sbjct: 396 CKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNG 455

Query: 205 ----------------------------------ERTCGIIVSGYCKEGNMEDAMRFLYR 230
                                               TC ++V+ +C+ G +E+A  F+  
Sbjct: 456 ILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNH 515

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
           M  + + PN V F+ +I G+ +  D+         M  FG  P + T+  ++      G 
Sbjct: 516 MSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGH 575

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           + +  + F  +       D  +F+       R+G    A +++  M      P+   +T 
Sbjct: 576 INEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTN 635

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIG-INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
           +I+G C   K+  A+ +  K  E G ++PN   Y +L+ G  +      A  + + M  K
Sbjct: 636 LIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNK 695

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            V P      ++ D +   G   +   +L +
Sbjct: 696 DVEPDTVAFNVIIDQYSRKGKTSKVNDILST 726



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 94/438 (21%), Positives = 190/438 (43%), Gaps = 37/438 (8%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISK-VEKDGMKPDSIL 66
            G   +A  + N ++     P   TYT L+A L ++ +  + L L  K +EK  + P+  +
Sbjct: 609  GNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAV 668

Query: 67   FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            + ++++   + G+   A+ IF++M +   +P T  +N +I  Y   GK  +   +L  M 
Sbjct: 669  YTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTM- 727

Query: 127  QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            + KN+  N  TYNIL+  +  ++++   + +   M+  G  PD  ++++L   Y Q    
Sbjct: 728  KSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSF 787

Query: 187  YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
              A ++L  +       +  T  ++++ +C+   M+ A   + +M +  V PN+  +N+L
Sbjct: 788  DVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNAL 847

Query: 247  IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
              G +   D     + L ++ E G  P    + T+++     G +    ++ D+M   GI
Sbjct: 848  FNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGI 907

Query: 307  E-----------------------------------PDIHVFSILAKGYVRAGEPQKAES 331
                                                P +  F+ L   Y +     KA  
Sbjct: 908  SSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALE 967

Query: 332  ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
            + + M    V  +VV +  +ISG C    ++ A  +YE+M +  + PN   Y  L+  + 
Sbjct: 968  LRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFC 1027

Query: 392  EAKQPWRAEELLQVMEEK 409
                   +E+LL+ ++++
Sbjct: 1028 AGNYQIESEKLLRDIQDR 1045



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/440 (22%), Positives = 178/440 (40%), Gaps = 35/440 (7%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  +F+ +   GH P+L TY  L+  L         L    ++       D+++F
Sbjct: 539 GDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIF 598

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N  + +   SGN+ +A+ +  +M  +   P   TY  LI G    GK   +L L     +
Sbjct: 599 NTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIE 658

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              + PN   Y  LV           A  +  +M+   ++PD V +N +   Y++ G+T 
Sbjct: 659 KGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTS 718

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +   +L  M++  +  N  T  I++ GY K   M         M      P+   ++SLI
Sbjct: 719 KVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLI 778

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G+   K  D   K L  +   G   D  TF+ ++  +     M K  E+   M +  + 
Sbjct: 779 LGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVI 838

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC----------- 356
           P++  ++ L  G +R  +  KA  +L  + + G  P    + T+I+G C           
Sbjct: 839 PNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKL 898

Query: 357 ------------------------NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
                                   N+ K++ A+ + + M E+ I P + T+ TL+  Y +
Sbjct: 899 QDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCK 958

Query: 393 AKQPWRAEELLQVMEEKGVR 412
                +A EL  +ME   V+
Sbjct: 959 EANVAKALELRSIMEHCHVK 978



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/354 (20%), Positives = 174/354 (49%), Gaps = 3/354 (0%)

Query: 4    LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            L+  G    A YIF  ++ +   P  + +  ++   +R+ +   +  ++S ++   +  +
Sbjct: 676  LLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFN 735

Query: 64   SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
               +N +++  ++   +     +++ M   G  P   ++++LI GY      + ++K+L+
Sbjct: 736  LATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILR 795

Query: 124  LMSQDKNVKPNDR-TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             ++ + +V   DR T+N+L+  +C +N +++A+ +V +M    + P+  TYN L     +
Sbjct: 796  WITLEGHVI--DRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIR 853

Query: 183  YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
              + ++A ++L  +  +   P  +    +++G C+ GN++ AM+    MK L +  + V 
Sbjct: 854  TSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVA 913

Query: 243  FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
             +++++G  + K  +     L LM E  + P V TF+T+M  +     + K  E+   M 
Sbjct: 914  MSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIME 973

Query: 303  KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
               ++ D+  +++L  G    G+ + A  +   M++  + PN  ++  +I  +C
Sbjct: 974  HCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFC 1027



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/305 (21%), Positives = 129/305 (42%)

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           N   +++L+R       + +A    Y M   G+ P   T N +  +  +  +        
Sbjct: 104 NPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFF 163

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
             M    + P+  T  I+++  C+ G  ++A   L +M+E  V+P  V +N+L+  +   
Sbjct: 164 KGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKK 223

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
                  + +  M   G+  DV T++  +D         K   +   M +  + P+   +
Sbjct: 224 GRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITY 283

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           + L  G+VR G+ + A  +   M  + + PN + + T+I+G C    +  A+ + + M  
Sbjct: 284 NTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVS 343

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
            G+ PN  TY  LL G  +  +      +L+ M   GVR    +   + D     G+  E
Sbjct: 344 HGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEE 403

Query: 434 AKRVL 438
           A ++L
Sbjct: 404 AVQLL 408


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 199/410 (48%), Gaps = 1/410 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A  +F  +   G   T  TYT L+  L      +  +++   +  D   PD+ ++
Sbjct: 121 GMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVY 180

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             M++   E+G  +EA  + ++   +G +P    YN LI GY N G+ E +LK+ + M  
Sbjct: 181 ATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDG 240

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           ++   PN RTY  L+   C    +E A  +  +MV +G++P+ VTY  L +     G   
Sbjct: 241 NR-CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQ 299

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++L  M+ N + PN+ T  +++   CK   +E+A  FL  + +  V  N VV+ SLI
Sbjct: 300 CAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLI 359

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G       D  D+ +  M   G  PD  ++S+++D       + +   + +DM++ GI+
Sbjct: 360 DGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQ 419

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
                ++I+    VR    +  + I   M   G++P++V +T  +  +C   +M+ A S+
Sbjct: 420 ASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESM 479

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             +M + G+ PNL TY TL+ GY       +A    +VM  KG +P + +
Sbjct: 480 IVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDS 529



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 189/385 (49%), Gaps = 3/385 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+G G   EA  +F  +  +   P    Y T+V  L    R +    L+ +   +G +P+
Sbjct: 152 LLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPN 211

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++NA+I+    +G ++ A+K+F+ M  + C P   TY  LI G    GK E ++ L  
Sbjct: 212 IVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFS 271

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +   ++PN  TY  L++  C++  ++ A+ +++ M  +G+ P+  T++ L  A  + 
Sbjct: 272 RMVE-AGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKR 330

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +   A+  L  +    V+ NE     ++ G CK G ++ A   + +M      P+   +
Sbjct: 331 EKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSY 390

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW-SSAGLMGKCQEIFDDMV 302
           +SLI G    K        L  M E G++   VT++ I+D      G  G  ++IFD M+
Sbjct: 391 SSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGP-KKIFDKMI 449

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             GI PDI  +++  + Y   G  + AES++  M   GV PN+V + T+I G+ N   + 
Sbjct: 450 ATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVS 509

Query: 363 RAMSIYEKMCEIGINPNLKTYETLL 387
           +A S +E M   G  PN  +Y  LL
Sbjct: 510 QAFSTFEVMVGKGWKPNEDSYTVLL 534



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 196/478 (41%), Gaps = 75/478 (15%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV------ 80
           P L    TL+ AL R + F  + SL S++    ++     +  +INA   +G++      
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPARNLRT----YTTLINAYCLAGDIPAAKQH 94

Query: 81  -----------------------------DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGN 111
                                          A ++F  M   GC  T  TY  L+ G   
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 112 VGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAV 171
            G   E++ +   M  D +  P+   Y  +V   C     EEA  ++ + +++G +P+ V
Sbjct: 155 AGMVREAMTVFVGMRAD-SCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
            YN L   Y   GE   A ++   M  N+  PN RT   ++ G CK G +E AM    RM
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS----- 286
            E  + PN+V + +LI+G  +        + L LME  G+ P+  TFS ++DA       
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 287 ----------------------SAGLMGKCQ--------EIFDDMVKAGIEPDIHVFSIL 316
                                 ++ + G C+        E+   M+  G  PD H +S L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G  R  +  +A  +L  M + G+  + V +T +I      V  +    I++KM   GI
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           NP++ TY   +  Y E  +   AE ++  M ++GV P   T   +   +  +GL  +A
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQA 511



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/414 (20%), Positives = 181/414 (43%), Gaps = 48/414 (11%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
           +  G  P ++ Y  L+         +  L +   ++ +   P+   +  +I+   +SG V
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           + AM +F +M ++G +P   TY  LI+G  N G  + + +LL LM  +  V PND T+++
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLV-PNDWTFSV 322

Query: 141 LVRAWCSKNSIEEAW--------------NVVY---------------------KMVASG 165
           L+ A C +  +EEA                VVY                     KM++ G
Sbjct: 323 LIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEG 382

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
             PDA +Y++L     +  +  +A  ML +M    ++ +  T  II+    +E   E   
Sbjct: 383 FVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPK 442

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           +   +M    ++P++V +   ++ + +    +  +  +  M + GV P++VT++T++  +
Sbjct: 443 KIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGY 502

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI--LTSMRKYGVHP 343
           ++ GL+ +    F+ MV  G +P+   +++L +  V+      +  I  +  M+   V  
Sbjct: 503 ANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLL 562

Query: 344 NVV----------MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
             +          +++  I   C   +++ A   +  M    + P+   Y +++
Sbjct: 563 EDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSII 616



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 144/315 (45%), Gaps = 7/315 (2%)

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           N RTY  L+ A+C    I  A   +  ++ +G+ PD+  Y +    Y + G    A ++ 
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
             M          T   ++ G    G + +AM     M+     P+  V+ +++ G  + 
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
             ++  +  L      G +P++V ++ ++D + +AG M    ++F+ M      P++  +
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           + L  G  ++G+ ++A  + + M + G+ PNVV +T +I G CN   +Q A  +   M  
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
            G+ PN  T+  L+    + ++   A+  L  + +KGV+  +     + D     GL + 
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLID-----GLCKT 365

Query: 434 AKRVLKSAEEDRQSM 448
            K  + +A+E  Q M
Sbjct: 366 GK--IDAADELMQKM 378



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 117/238 (49%), Gaps = 3/238 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  + K  EA      L+++G +   + YT+L+  L +  +  +   L+ K+  +G 
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD+  ++++I+       + +A  + + M + G + +  TY  +I         E   K
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M     + P+  TY + VR++C +  +E+A +++ +MV  G+ P+ VTYNTL R Y
Sbjct: 444 IFDKMIA-TGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGY 502

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF--LYRMKELEV 236
           A  G   +A      M     +PNE +  +++    K+ + ++++    +  MK+L+V
Sbjct: 503 ANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQV 560



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 11/172 (6%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           IF+ +I  G  P ++TYT  V +   + R +   S+I ++   G+ P+ + +N +I   +
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES--------LKLLQLMSQ 127
             G V +A   F+ M   G KP   +Y  L++        + S        +K LQ++ +
Sbjct: 504 NLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLE 563

Query: 128 D---KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           D   + +      Y+  +R  C  + +EEA +    M  + + P    Y ++
Sbjct: 564 DITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSI 615



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 1/176 (0%)

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T++T+++A+  AG +   ++    ++ AG+ PD + ++    GY RAG    A  +   M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
              G       +T ++ G   A  ++ AM+++  M      P+   Y T++ G  EA + 
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK 452
             AE LL+     G  P       + D +   G    A +V +  + +R S PN +
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCS-PNVR 248


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 197/402 (49%), Gaps = 1/402 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  +   G   T  TYT L+  L      +  +++   +  D   PD+ ++  M++   
Sbjct: 129 VFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLC 188

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           E+G  +EA  + ++   +G +P    YN LI GY N G+ E +LK+ + M  ++   PN 
Sbjct: 189 EAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR-CSPNV 247

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           RTY  L+   C    +E A  +  +MV +G++P+ VTY  L +     G    A ++L  
Sbjct: 248 RTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHL 307

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M+ N + PN+ T  +++   CK   +E+A  FL  + +  V  N VV+ SLI G      
Sbjct: 308 METNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGK 367

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D  D+ +  M   G  PD  ++S+++D       + +   + +DM++ GI+     ++I
Sbjct: 368 IDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTI 427

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           +    VR    +  + I   M   G++P++V +T  +  +C   +M+ A S+  +M + G
Sbjct: 428 IIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRG 487

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           + PNL TY TL+ GY       +A    +VM  KG +P + +
Sbjct: 488 VFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDS 529



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 189/385 (49%), Gaps = 3/385 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+G G   EA  +F  +  +   P    Y T+V  L    R +    L+ +   +G +P+
Sbjct: 152 LLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPN 211

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++NA+I+    +G ++ A+K+F+ M  + C P   TY  LI G    GK E ++ L  
Sbjct: 212 IVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFS 271

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +   ++PN  TY  L++  C++  ++ A+ +++ M  +G+ P+  T++ L  A  + 
Sbjct: 272 RMVE-AGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKR 330

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +   A+  L  +    V+ NE     ++ G CK G ++ A   + +M      P+   +
Sbjct: 331 EKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSY 390

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW-SSAGLMGKCQEIFDDMV 302
           +SLI G    K        L  M E G++   VT++ I+D      G  G  ++IFD M+
Sbjct: 391 SSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGP-KKIFDKMI 449

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             GI PDI  +++  + Y   G  + AES++  M   GV PN+V + T+I G+ N   + 
Sbjct: 450 ATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVS 509

Query: 363 RAMSIYEKMCEIGINPNLKTYETLL 387
           +A S +E M   G  PN  +Y  LL
Sbjct: 510 QAFSTFEVMVGKGWKPNEDSYTVLL 534



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 196/478 (41%), Gaps = 75/478 (15%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV------ 80
           P L    TL+ AL R + F  + SL S++    ++     +  +INA   +G++      
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPARNLRT----YTTLINAYCLAGDIPAAKQH 94

Query: 81  -----------------------------DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGN 111
                                          A ++F  M   GC  T  TY  L+ G   
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 112 VGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAV 171
            G   E++ +   M  D +  P+   Y  +V   C     EEA  ++ + +++G +P+ V
Sbjct: 155 AGMVREAMAVFVGMRAD-SCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
            YN L   Y   GE   A ++   M  N+  PN RT   ++ G CK G +E AM    RM
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS----- 286
            E  + PN+V + +LI+G  +        + L LME  G+ P+  TFS ++DA       
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 287 ----------------------SAGLMGKCQ--------EIFDDMVKAGIEPDIHVFSIL 316
                                 ++ + G C+        E+   M+  G  PD H +S L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G  R  +  +A  +L  M + G+  + V +T +I      V  +    I++KM   GI
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           NP++ TY   +  Y E  +   AE ++  M ++GV P   T   +   +  +GL  +A
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQA 511



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 188/403 (46%), Gaps = 12/403 (2%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
           +  G  P ++ Y  L+         +  L +   ++ +   P+   +  +I+   +SG V
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           + AM +F +M ++G +P   TY  LI+G  N G  + + +LL LM  +  V PND T+++
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLV-PNDWTFSV 322

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+ A C +  +EEA   +  +V  G++ + V Y +L     + G+   A++++ +M +  
Sbjct: 323 LIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEG 382

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
             P+  +   ++ G C++  +  A   L  M E  +  + V +  +I   +    S+G  
Sbjct: 383 FVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPK 442

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           K    M   G+ PD+VT++  + ++   G M   + +   MV  G+ P++  ++ L +GY
Sbjct: 443 KIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGY 502

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
              G   +A S    M   G  PN   +T ++           ++ I+    +I    +L
Sbjct: 503 ANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIW----KIADMKDL 558

Query: 381 K--TYETLLWG---YGEAKQPWRAE--ELLQVMEEKGVRPKKS 416
           +   Y+ ++W    YG  ++   AE   LL VM+E G +P  +
Sbjct: 559 QESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNT 601



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 144/315 (45%), Gaps = 7/315 (2%)

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           N RTY  L+ A+C    I  A   +  ++ +G+ PD+  Y +    Y + G    A ++ 
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
             M          T   ++ G    G + +AM     M+     P+  V+ +++ G  + 
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
             ++  +  L      G +P++V ++ ++D + +AG M    ++F+ M      P++  +
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           + L  G  ++G+ ++A  + + M + G+ PNVV +T +I G CN   +Q A  +   M  
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
            G+ PN  T+  L+    + ++   A+  L  + +KGV+  +     + D     GL + 
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLID-----GLCKT 365

Query: 434 AKRVLKSAEEDRQSM 448
            K  + +A+E  Q M
Sbjct: 366 GK--IDAADELMQKM 378



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 134/276 (48%), Gaps = 4/276 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  + K  EA      L+++G +   + YT+L+  L +  +  +   L+ K+  +G 
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD+  ++++I+       + +A  + + M + G + +  TY  +I         E   K
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M     + P+  TY + VR++C +  +E+A +++ +MV  G+ P+ VTYNTL R Y
Sbjct: 444 IFDKMIA-TGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGY 502

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF--LYRMKEL-EVH 237
           A  G   +A      M     +PNE +  +++    K+ + ++++    +  MK+L E +
Sbjct: 503 ANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESN 562

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
            + +V+  LI G L           L++M+E G +P
Sbjct: 563 YDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQP 598



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 1/176 (0%)

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T++T+++A+  AG +   ++    ++ AG+ PD + ++    GY RAG    A  +   M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
              G       +T ++ G   A  ++ AM+++  M      P+   Y T++ G  EA + 
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK 452
             AE LL+     G  P       + D +   G    A +V +  + +R S PN +
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCS-PNVR 248


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 199/410 (48%), Gaps = 1/410 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A  +F  +   G   T  TYT L+  L      +  +++   +  D   PD+ ++
Sbjct: 121 GMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVY 180

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             M++   E+G  +EA  + ++   +G +P    YN LI GY N G+ E +LK+ + M  
Sbjct: 181 ATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDG 240

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           ++   PN RTY  L+   C    +E A  +  +MV +G++P+ VTY  L +     G   
Sbjct: 241 NR-CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQ 299

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++L  M+ N + PN+ T  +++   CK   +E+A  FL  + +  V  N VV+ SLI
Sbjct: 300 CAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLI 359

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G       D  D+ +  M   G  PD  ++S+++D       + +   + +DM++ GI+
Sbjct: 360 DGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQ 419

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
                ++I+    VR    +  + I   M   G++P++V +T  +  +C   +M+ A S+
Sbjct: 420 ASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESM 479

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             +M + G+ PNL TY TL+ GY       +A    +VM  KG +P + +
Sbjct: 480 IVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDS 529



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 189/385 (49%), Gaps = 3/385 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+G G   EA  +F  +  +   P    Y T+V  L    R +    L+ +   +G +P+
Sbjct: 152 LLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPN 211

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++NA+I+    +G ++ A+K+F+ M  + C P   TY  LI G    GK E ++ L  
Sbjct: 212 IVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFS 271

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +   ++PN  TY  L++  C++  ++ A+ +++ M  +G+ P+  T++ L  A  + 
Sbjct: 272 RMVE-AGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKR 330

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +   A+  L  +    V+ NE     ++ G CK G ++ A   + +M      P+   +
Sbjct: 331 EKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSY 390

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW-SSAGLMGKCQEIFDDMV 302
           +SLI G    K        L  M E G++   VT++ I+D      G  G  ++IFD M+
Sbjct: 391 SSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGP-KKIFDKMI 449

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             GI PDI  +++  + Y   G  + AES++  M   GV PN+V + T+I G+ N   + 
Sbjct: 450 ATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVS 509

Query: 363 RAMSIYEKMCEIGINPNLKTYETLL 387
           +A S +E M   G  PN  +Y  LL
Sbjct: 510 QAFSTFEVMVGKGWKPNEDSYTVLL 534



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 196/478 (41%), Gaps = 75/478 (15%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV------ 80
           P L    TL+ AL R + F  + SL S++    ++     +  +INA   +G++      
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPARNLRT----YTTLINAYCLAGDIPAAKQH 94

Query: 81  -----------------------------DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGN 111
                                          A ++F  M   GC  T  TY  L+ G   
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 112 VGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAV 171
            G   E++ +   M  D +  P+   Y  +V   C     EEA  ++ + +++G +P+ V
Sbjct: 155 AGMVREAMAVFVGMRAD-SCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
            YN L   Y   GE   A ++   M  N+  PN RT   ++ G CK G +E AM    RM
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS----- 286
            E  + PN+V + +LI+G  +        + L LME  G+ P+  TFS ++DA       
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 287 ----------------------SAGLMGKCQ--------EIFDDMVKAGIEPDIHVFSIL 316
                                 ++ + G C+        E+   M+  G  PD H +S L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G  R  +  +A  +L  M + G+  + V +T +I      V  +    I++KM   GI
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           NP++ TY   +  Y E  +   AE ++  M ++GV P   T   +   +  +GL  +A
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQA 511



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/466 (21%), Positives = 193/466 (41%), Gaps = 85/466 (18%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
           +  G  P ++ Y  L+         +  L +   ++ +   P+   +  +I+   +SG V
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           + AM +F +M ++G +P   TY  LI+G  N G  + + +LL LM  +  V PND T+++
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLV-PNDWTFSV 322

Query: 141 LVRAWCSKNSIEEAW--------------NVVY---------------------KMVASG 165
           L+ A C +  +EEA                VVY                     KM++ G
Sbjct: 323 LIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEG 382

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR----------------------- 202
             PDA +Y++L     +  +  +A  ML +M    ++                       
Sbjct: 383 FVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPK 442

Query: 203 ------------PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
                       P+  T  + V  YC+EG MEDA   + +M +  V PNLV +N+LI+G+
Sbjct: 443 KIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGY 502

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIM-------------DAWSSAGLMGKCQEI 297
            ++           +M   G KP+  +++ ++             D W  A  M   Q +
Sbjct: 503 ANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIAD-MKDLQVL 561

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            +D+ +  +     ++S   +   R    ++A+     M+   + P+  ++T++I   C 
Sbjct: 562 LEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCR 621

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
              +  A+++ + M + G  P+L++Y  ++    E      A+E+ 
Sbjct: 622 LKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVF 667



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/418 (21%), Positives = 182/418 (43%), Gaps = 28/418 (6%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  + K  EA      L+++G +   + YT+L+  L +  +  +   L+ K+  +G 
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD+  ++++I+       + +A  + + M + G + +  TY  +I         E   K
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M     + P+  TY + VR++C +  +E+A +++ +MV  G+ P+ VTYNTL R Y
Sbjct: 444 IFDKMIA-TGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGY 502

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF--LYRMKELEVHP 238
           A  G   +A      M     +PNE +  +++    K+ + ++++    +  MK+L+V  
Sbjct: 503 ANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQV-- 560

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
                  L++        D  ++ L L  +         +S  +        + + +  F
Sbjct: 561 -------LLE--------DITERQLPLAADI--------YSCFIRCLCRVDRLEEAKHFF 597

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
             M  A + P   V++ +     R      A ++L SM K G  P++  +  +IS  C  
Sbjct: 598 MGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEG 657

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
              + A  ++  +     N +   ++ L++G  +         LL VM+E G +P  +
Sbjct: 658 GNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNT 715



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 144/315 (45%), Gaps = 7/315 (2%)

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           N RTY  L+ A+C    I  A   +  ++ +G+ PD+  Y +    Y + G    A ++ 
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
             M          T   ++ G    G + +AM     M+     P+  V+ +++ G  + 
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
             ++  +  L      G +P++V ++ ++D + +AG M    ++F+ M      P++  +
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           + L  G  ++G+ ++A  + + M + G+ PNVV +T +I G CN   +Q A  +   M  
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
            G+ PN  T+  L+    + ++   A+  L  + +KGV+  +     + D     GL + 
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLID-----GLCKT 365

Query: 434 AKRVLKSAEEDRQSM 448
            K  + +A+E  Q M
Sbjct: 366 GK--IDAADELMQKM 378



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 1/176 (0%)

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T++T+++A+  AG +   ++    ++ AG+ PD + ++    GY RAG    A  +   M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
              G       +T ++ G   A  ++ AM+++  M      P+   Y T++ G  EA + 
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK 452
             AE LL+     G  P       + D +   G    A +V +  + +R S PN +
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCS-PNVR 248


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 203/427 (47%), Gaps = 2/427 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +P       ++ +L   K      S++  + K G++P  + F  +IN     G+V  A
Sbjct: 106 GIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRA 165

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +++   ++ +G +    TY  LI G   +GK  E++  L+ M +++N  PN   Y+ ++ 
Sbjct: 166 VELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKM-EERNWNPNVVVYSTVMD 224

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C    + EA  +  +M   GI+P+ VTY  L +    +G    A  +L EM    V P
Sbjct: 225 GLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMP 284

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           + ++  I+V   CKEG +  A   +  M  +   P++  +NSLI  +      D   +  
Sbjct: 285 DLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVF 344

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            LM   G  PD+V +++++  W     + K   + D+M+K G  PD+  ++ L  G+ + 
Sbjct: 345 ELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQV 404

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G P  A+ +  +M KYG  PN+     ++ G C +  +  A+S++  M +  ++ N+  Y
Sbjct: 405 GRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIY 464

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             +L G   A +   A EL   +  KG++       ++ + +   GL  +A+ +L + EE
Sbjct: 465 SIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEE 524

Query: 444 DRQSMPN 450
           +   MP+
Sbjct: 525 N-GCMPD 530



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 212/427 (49%), Gaps = 10/427 (2%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +   +++ G  P+++T+T L+  L  +      + L+  VEK G + D   +  +IN   
Sbjct: 133 VLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLC 192

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G   EA+   +KM++    P    Y+T++ G    G   E+L L   MS  K +KPN 
Sbjct: 193 KMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMS-GKGIKPNL 251

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY  L++  C+    +EA +++ +M+  G+ PD  + N L     + G+  +A+ ++  
Sbjct: 252 VTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGF 311

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M      P+  T   ++  YC +  M++A R    M      P++V + SLI G+  IK+
Sbjct: 312 MILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKN 371

Query: 256 SDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
              ++KA+ L++E    G  PDVVT++T++  +   G     +E+F +M K G  P++  
Sbjct: 372 ---INKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQT 428

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
            +I+  G  ++    +A S+  +M K  +  N+V+++ ++ G C+A K+  A+ ++  + 
Sbjct: 429 CAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLP 488

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
             G+  N+  Y  ++ G+ +     +AE+LL  MEE G  P   T  +      A    R
Sbjct: 489 AKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVA---ER 545

Query: 433 EAKRVLK 439
           E  R +K
Sbjct: 546 EIARSIK 552



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/455 (23%), Positives = 211/455 (46%), Gaps = 47/455 (10%)

Query: 66  LFNAMINACSESG---NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
             N M N C +SG   ++DEA+  F  M      P+   +  L+     +     ++ L+
Sbjct: 40  FLNFMRNQC-KSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLV 98

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           + M     +KP+    N+++ + C    +   ++V+  M+  G++P  VT+  L      
Sbjct: 99  KEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCV 158

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+  RA +++  ++    R + +T G++++G CK G   +A+ +L +M+E   +PN+VV
Sbjct: 159 KGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVV 218

Query: 243 FNSLIKGFLDIKDSDG-VDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           +++++ G       DG V +AL L  E    G+KP++VT++ ++    + G   +   + 
Sbjct: 219 YSTVMDGLC----KDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLL 274

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM----------------RKY--- 339
           D+M+K G+ PD+   +IL     + G+  +A+S++  M                 +Y   
Sbjct: 275 DEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQ 334

Query: 340 ----------------GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
                           G  P++V +T++I GWC    + +AM + ++M ++G  P++ T+
Sbjct: 335 NQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTW 394

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            TL+ G+ +  +P  A+EL   M + G  P   T  ++ D      L  EA  +  + E+
Sbjct: 395 TTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEK 454

Query: 444 DRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPG 478
               +      I ++ +     L+ +   F  +P 
Sbjct: 455 SNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPA 489



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 169/365 (46%), Gaps = 36/365 (9%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G +P L+TYT L+  L    R+K   SL+ ++ K G+ PD    N +++   + G + +
Sbjct: 245 KGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQ 304

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A  +   M   G  P   TYN+LI  Y    + +E+ ++ +LM   +   P+   Y  L+
Sbjct: 305 AKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVS-RGCLPDIVAYTSLI 363

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
             WC   +I +A +++ +M+  G  PD VT+ TL   + Q G    A+++   M      
Sbjct: 364 HGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQV 423

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           PN +TC II+ G CK   + +A+   + M+               K  LD+         
Sbjct: 424 PNLQTCAIILDGLCKSQLLSEALSLFHAME---------------KSNLDL--------- 459

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
                      ++V +S I+D   SAG +    E+F  +   G++ +++ ++I+  G+ +
Sbjct: 460 -----------NIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAK 508

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G   KAE +L++M + G  P+   +   + G     ++ R++     M + G + +  T
Sbjct: 509 QGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATT 568

Query: 383 YETLL 387
            E ++
Sbjct: 569 TEMII 573



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 133/287 (46%), Gaps = 1/287 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L  +GK  +A  +   +I  G  P + TY +L+     Q +      +   +   G 
Sbjct: 293 VDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGC 352

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + + ++I+   +  N+++AM +  +M   G  P   T+ TLI G+  VG+P  + +
Sbjct: 353 LPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKE 412

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M +   V PN +T  I++   C    + EA ++ + M  S +  + V Y+ +    
Sbjct: 413 LFLNMHKYGQV-PNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGM 471

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G+   A ++   +    ++ N     I+++G+ K+G ++ A   L  M+E    P+ 
Sbjct: 472 CSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDS 531

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
             +N  ++G +  ++     K LT+M + G   D  T   I++  S+
Sbjct: 532 CTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYLST 578



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/220 (21%), Positives = 104/220 (47%), Gaps = 3/220 (1%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           ++A ++ + +I+ G  P ++T+TTL+    +  R  +   L   + K G  P+      +
Sbjct: 373 NKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAII 432

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           ++   +S  + EA+ +F  M+ S        Y+ ++ G  + GK   +L+L   +   K 
Sbjct: 433 LDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPA-KG 491

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           ++ N   Y I++  +  +  +++A +++  M  +G  PD+ TYN   +      E  R+ 
Sbjct: 492 LQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSI 551

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR-FLY 229
           + L  M++     +  T  +I++ Y      ++ +R FL+
Sbjct: 552 KYLTMMRDKGFSVDATTTEMIIN-YLSTNQGDNELREFLF 590


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 204/409 (49%), Gaps = 1/409 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P ++TY TLV  L + + F+  L +I ++ +    P     ++++    + G V+EA+ 
Sbjct: 294 KPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALN 353

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           + +++ + G  P    YN LI         +E+  L   M +   + PND TY+IL+  +
Sbjct: 354 LVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGK-IGLCPNDVTYSILIDMF 412

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C +  ++ A + + +M+  G++P    YN+L   + ++G+   AE ++ EM N ++ P  
Sbjct: 413 CRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTV 472

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   ++ GYC +G +  A+R  + M    + P++  F +L+ G           K  T 
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTE 532

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M E+ VKP+ VT++ +++ +   G M K  E  ++M++ GI PD + +  L  G    G+
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQ 592

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A+  +  + K     N + +T ++ G+C   K++ A+S+ + M   G++ +L  Y  
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGV 652

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           L+ G  + K       LL+ M ++G++P       + D+    G  +EA
Sbjct: 653 LIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA 701



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 201/424 (47%), Gaps = 8/424 (1%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F+ +I  G RP +  YT ++ +L   K       +I ++E  G   + + +N +I+
Sbjct: 211 AMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLID 270

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              +   V EA+ I + +     KP   TY TL+ G   V + E  L+++  M + +   
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLR-FS 329

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P++   + LV     +  +EEA N+V ++   G+ P+   YN L  +  + G  +   ++
Sbjct: 330 PSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCK-GRNFDEAEL 388

Query: 193 LFE-MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           LF+ M    + PN+ T  I++  +C+ G ++ A+ FL  M ++ + P++  +NSLI G  
Sbjct: 389 LFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHC 448

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
              D    +  +  M    ++P VVT++++M  + S G + K   ++ +M   GI P I+
Sbjct: 449 KFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIY 508

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            F+ L  G  RAG  + A  + T M ++ V PN V +  +I G+C    M +A     +M
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEM 568

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
            E GI P+  +Y  L+ G     Q   A+  +      G+      +  +  +    G  
Sbjct: 569 IEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD-----GLHKGNCELNEICYTGLLHGFC 623

Query: 432 REAK 435
           RE K
Sbjct: 624 REGK 627



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 106/450 (23%), Positives = 206/450 (45%), Gaps = 36/450 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++   +GK   A      +I+ G +P++  Y +L+    +     +  SL++++    +
Sbjct: 409 IDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKL 468

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P  + + +++      G +++A++++ +M   G  P+  T+ TL+ G    G   +++K
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVK 528

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M++  NVKPN  TYN+++  +C + ++ +A+  + +M+  GI PD  +Y  L    
Sbjct: 529 LFTEMAE-WNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGL 587

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G+   A+  +  +       NE     ++ G+C+EG +E+A+     M    V  +L
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDL 647

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +  LI G L  KD       L  M + G+KPD V +++++DA S  G   +   I+D 
Sbjct: 648 VCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDL 707

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK---------------------- 338
           M+  G  P+   ++ +  G  +AG   +AE + + MR                       
Sbjct: 708 MINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVG 767

Query: 339 -------------YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
                         G+  N   +  +I G+C   +M+ A  +  +M   G++P+  TY T
Sbjct: 768 DMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTT 827

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           ++          +A EL   M EKG+RP +
Sbjct: 828 MISELCRRNDVKKAIELWNSMTEKGIRPDR 857



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 204/422 (48%), Gaps = 10/422 (2%)

Query: 9   KPHEAH-YIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDGMKPDSIL 66
           KP E    +F+C  E+    +  ++  L+    R +R    +L     + K  + P+   
Sbjct: 136 KPSEVFDALFSCY-EKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRT 194

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQ 123
            +A+++   +  +   AM++F  M + G +P    Y  +I+      ++ + +E +  ++
Sbjct: 195 LSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQME 254

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
               D N+ P    YN+L+   C K  + EA  +   +    ++PD VTY TL     + 
Sbjct: 255 ATGCDVNIVP----YNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKV 310

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E     +M+ EM   +  P+E     +V G  K G +E+A+  + R+ E  V PN+ V+
Sbjct: 311 QEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVY 370

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+LI      ++ D  +     M + G+ P+ VT+S ++D +   G +        +M+ 
Sbjct: 371 NALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMID 430

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G++P ++ ++ L  G+ + G+   AES++  M    + P VV +T+++ G+C+  K+ +
Sbjct: 431 MGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+ +Y +M   GI P++ T+ TLL G   A     A +L   M E  V+P + T  ++ +
Sbjct: 491 ALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIE 550

Query: 424 SW 425
            +
Sbjct: 551 GY 552



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 188/417 (45%), Gaps = 1/417 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  EA  +   + E G  P +  Y  L+ +L + + F     L  ++ K G+ P+ + 
Sbjct: 345 RGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVT 404

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +I+     G +D A+    +M D G KP+   YN+LI G+   G    +  L+  M 
Sbjct: 405 YSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMI 464

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +K ++P   TY  L+  +CSK  I +A  + ++M   GI P   T+ TL     + G  
Sbjct: 465 -NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLI 523

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++  EM    V+PN  T  +++ GYC+EGNM  A  FL  M E  + P+   +  L
Sbjct: 524 RDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPL 583

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G      +      +  + +   + + + ++ ++  +   G + +   +  DM   G+
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGV 643

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           + D+  + +L  G ++  + +    +L  M   G+ P+ V++T++I         + A  
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           I++ M   G  PN  TY  ++ G  +A     AE L   M      P + T     D
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLD 760



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 201/412 (48%), Gaps = 3/412 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KGK ++A  +++ +  +G  P++ T+TTL++ L R    +  + L +++ +  +KP+ + 
Sbjct: 485 KGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVT 544

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N MI    E GN+ +A +   +M + G  P T +Y  LI G    G+  E+   +  + 
Sbjct: 545 YNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +  N + N+  Y  L+  +C +  +EEA +V   M   G+  D V Y  L     ++ + 
Sbjct: 605 KG-NCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDR 663

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
                +L EM +  ++P++     ++    K G+ ++A      M      PN V + ++
Sbjct: 664 KVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA-GLMGKCQEIFDDMVKAG 305
           I G       +  +   + M      P+ VT+   +D  +   G M K  E+ + ++K G
Sbjct: 724 INGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK-G 782

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           +  +   +++L +G+ R G  ++A  ++T M   GV P+ + +TT+IS  C    +++A+
Sbjct: 783 LLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAI 842

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            ++  M E GI P+   Y TL+ G   A +  +A EL   M  +G++P   T
Sbjct: 843 ELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTET 894



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/482 (22%), Positives = 202/482 (41%), Gaps = 63/482 (13%)

Query: 3   ILVGK-GKPHEAHYIFNCL-IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           IL+G    P      FN L +  G   +  ++  L+ AL +   F    SL+  +    +
Sbjct: 76  ILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVQANLFWPASSLLQTLLLRAL 135

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCK-PTTSTYNTLIKGYGNVGKPEESL 119
           KP  + F+A+  +C E                  CK  ++S+++ LI+ Y    +  + +
Sbjct: 136 KPSEV-FDALF-SCYEK-----------------CKLSSSSSFDLLIQHYVRSRRVLDGV 176

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            + ++M    ++ P  RT + L+           A  +   M+  GI+PD   Y  + R+
Sbjct: 177 LVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRS 236

Query: 180 YAQYGETYRAEQMLFEMQ-----------------------------------NNQVRPN 204
             +  +  RA++M+ +M+                                     +++P+
Sbjct: 237 LCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPD 296

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   +V G CK    E  +  +  M  L   P+    +SL++G   ++    V++AL 
Sbjct: 297 VVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEG---LRKRGKVEEALN 353

Query: 265 LME---EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           L++   EFGV P++  ++ ++D+        + + +FD M K G+ P+   +SIL   + 
Sbjct: 354 LVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFC 413

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           R G+   A S L  M   G+ P+V  + ++I+G C    +  A S+  +M    + P + 
Sbjct: 414 RRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVV 473

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY +L+ GY    +  +A  L   M  KG+ P   T   +       GL R+A ++    
Sbjct: 474 TYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEM 533

Query: 442 EE 443
            E
Sbjct: 534 AE 535



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 56/100 (56%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  EA  +   +I +G  P  ITYTT+++ L R+   K  + L + + + G++PD + 
Sbjct: 800 QGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVA 859

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLI 106
           +N +I+ C  +G + +A ++  +M   G KP T T  T I
Sbjct: 860 YNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTI 899


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 218/443 (49%), Gaps = 2/443 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+LV   K        + ++  G RP + T+  L+ AL R  + +  + L+ ++E  G+
Sbjct: 167 LNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGL 226

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   F  ++    E GN+D AM++ ++M ++GC  T  T N L+ G+   G+ EE+L+
Sbjct: 227 LPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALR 286

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            ++ MS  +   P+  T+N+LV        ++ A  V+  M+  G  PD  TYN+L    
Sbjct: 287 FIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGL 346

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + GE   A ++L +M      PN  T   I+S  CKE  +E+A +    +    + P++
Sbjct: 347 CKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDV 406

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +NSLI+G    ++     +    M+  G  PD  T++ ++D+    G + +   +  +
Sbjct: 407 CTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKE 466

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M  +G   ++  ++ L  G+ +     +AE I   M   GV  N V + T+I G C + +
Sbjct: 467 MEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSER 526

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI-Q 419
           ++ A  + ++M   G+ P+  TY +LL  + +A    +A +++Q M   G  P   T   
Sbjct: 527 VEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGT 586

Query: 420 LVADSWRAIGLAREAKRVLKSAE 442
           L+A   +A G    A ++L++ +
Sbjct: 587 LIAGLCKA-GRVEAATKLLRTIQ 608



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 192/385 (49%), Gaps = 2/385 (0%)

Query: 38  ALTRQKRFKSILSLISKVE-KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCK 96
              ++ R +  L  I ++  ++G  PD   FN ++N  S++G+V  A+++   M   G  
Sbjct: 274 GFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFD 333

Query: 97  PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWN 156
           P   TYN+LI G   +G+ +E++K+L  M + ++  PN  TYN ++   C +N +EEA  
Sbjct: 334 PDIYTYNSLISGLCKLGEVDEAVKVLNQMIE-RDCSPNTVTYNTIISTLCKENQVEEATK 392

Query: 157 VVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
           +   +   GI PD  TYN+L +          A ++  EM+     P+E T  +++   C
Sbjct: 393 LALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLC 452

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
             G +++A+  L  M+      N++ +N+LI GF   K     ++    ME  GV  + V
Sbjct: 453 FRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSV 512

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T++T++D    +  + +  ++ D M+  G+ PD   ++ L   + +AG+ +KA  I+ +M
Sbjct: 513 TYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTM 572

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
              G  P++V + T+I+G C A +++ A  +   +   GIN     Y  ++      K+ 
Sbjct: 573 ASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRS 632

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLV 421
             A  L + M EK   P   T ++V
Sbjct: 633 KEAVRLFREMIEKAEAPDAVTYKIV 657



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 208/429 (48%), Gaps = 9/429 (2%)

Query: 7   KGKPHEA-HYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
           +G+  EA  +I    + EG  P   T+  LV  L++    K  L ++  + ++G  PD  
Sbjct: 278 EGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIY 337

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            +N++I+   + G VDEA+K+  +M +  C P T TYNT+I       + EE+ KL  L+
Sbjct: 338 TYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKL-ALV 396

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
              K + P+  TYN L++  C   +   A  +  +M   G  PD  TYN L  +    G+
Sbjct: 397 LTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGK 456

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A  +L EM+ +    N  T   ++ G+CK   + +A     +M+   V  N V +N+
Sbjct: 457 LQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNT 516

Query: 246 LIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           LI G      S+ V++A  LM++    G++PD  T+++++  +  AG + K  +I   M 
Sbjct: 517 LIDGLC---KSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMA 573

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G EPDI  +  L  G  +AG  + A  +L +++  G++     +  VI       + +
Sbjct: 574 SDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSK 633

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP-WRAEELLQVMEEKGVRPKKSTIQLV 421
            A+ ++ +M E    P+  TY+ +  G  +   P   A + +  M E+G  P+ S+  ++
Sbjct: 634 EAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYML 693

Query: 422 ADSWRAIGL 430
           A+   ++ +
Sbjct: 694 AEGLFSLAM 702



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 200/418 (47%), Gaps = 8/418 (1%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKD-GMKPDSILFNAMINACSESGNVDEAMKIFQ 88
            T T L+ +L R++   +++ L     K    KP S +F  +++   ++G  D    I +
Sbjct: 54  FTPTQLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILK 113

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
           +MK S       +    I+ Y + G   E L+ +  M  +  V  N   YN L+      
Sbjct: 114 EMKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDG 173

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
           N ++        MV+ GI+PD  T+N L +A  +  +   A  ++ EM++  + P+E+T 
Sbjct: 174 NKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTF 233

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             I+ G+ +EGN++ AMR   +M E       V  N L+ GF        +++AL  +EE
Sbjct: 234 TTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFC---KEGRIEEALRFIEE 290

Query: 269 F----GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
                G  PD  TF+ +++  S  G +    E+ D M++ G +PDI+ ++ L  G  + G
Sbjct: 291 MSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLG 350

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           E  +A  +L  M +    PN V + T+IS  C   +++ A  +   +   GI P++ TY 
Sbjct: 351 EVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYN 410

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           +L+ G   ++    A EL + M+ KG  P + T  ++ DS    G  +EA  +LK  E
Sbjct: 411 SLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEME 468



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 99/220 (45%), Gaps = 5/220 (2%)

Query: 237 HPNLVVFNSLIKGFLDIKDSDG-VDKALTLMEEFGVKPDVV---TFSTIMDAWSSAGLMG 292
            PN    +S+ K  L      G  D    +++E  +   V+   +    +++++S GL  
Sbjct: 82  QPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYN 141

Query: 293 KCQEIFDDM-VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
           +  +  D M V+ G+  + H ++ L    V   + +  E   ++M   G+ P+V  F  +
Sbjct: 142 EILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNIL 201

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I   C A +++ A+ + E+M + G+ P+ KT+ T++ G+ E      A  + + M E G 
Sbjct: 202 IKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGC 261

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
                T+ ++ + +   G   EA R ++         P+K
Sbjct: 262 VVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDK 301


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 205/414 (49%), Gaps = 2/414 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA-CSESGNVDEAMK 85
           PT +TYT L++            + + ++ K G++ ++I F  ++   C+E    D    
Sbjct: 11  PTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNI 70

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD-KNVKPNDRTYNILVRA 144
           + +     GC P   +Y  L+KG  +  K EE++ L+ +M++D  +  PN  +Y  ++  
Sbjct: 71  VIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHG 130

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +  ++ + +A+ +  +M+  GI PD VT N++     +     +AE++L +M +  + P+
Sbjct: 131 FFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPD 190

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   +V GY   G +++A+R L +M      PN V ++ LI             + L 
Sbjct: 191 CTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILN 250

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M +    P+V T+  ++  +++ G + +   + D MV+ G+ PD H+F+I    YV+ G
Sbjct: 251 SMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCG 310

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              +A      MR+ G+ P+++ + T+I G C   ++  AMS + +M + G++P++  + 
Sbjct: 311 RLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFT 370

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            L+ G+    +  +AEEL   M ++G+RP       + D     G   EAK + 
Sbjct: 371 NLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLF 424



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 202/409 (49%), Gaps = 3/409 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG--MKPDSILFNAMINACSESGNVD 81
           G  P + +YT L+  L  +K+ +  + LI  + +DG    P+ + +  +I+   +   V 
Sbjct: 79  GCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVG 138

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +A  +F +M D G  P   T N++I G   V   +++ ++L+ M  DK++ P+  TYN L
Sbjct: 139 KAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMF-DKHIMPDCTTYNSL 197

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           V  + S   ++EA  ++ +M   G  P+ VTY+ L     ++G    A ++L  M  ++ 
Sbjct: 198 VHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRG 257

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            PN  T G ++ GY  +G++ +    +  M +  V P+  +FN  I  ++     D    
Sbjct: 258 NPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAML 317

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
               M + G+ PD++++ T++D     G +      F  M+  G+ PDI VF+ L  G+ 
Sbjct: 318 TFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFS 377

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
             G+ +KAE +   M   G+ P VV+FTT+I       K+  A ++++ M    + PN+ 
Sbjct: 378 MYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVV 437

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           +Y  ++ GY  A +     +LL  M   G++P   T   + D   ++GL
Sbjct: 438 SYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSMGL 486



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/382 (24%), Positives = 168/382 (43%), Gaps = 55/382 (14%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   TY +LV       + K  + ++ ++ + G  P+ + ++ +I+   + G   EA +I
Sbjct: 189 PDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREI 248

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
              M  S   P  +TY  L+ GY   G   E   L+ LM Q+  V+P+   +NI + A+ 
Sbjct: 249 LNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQN-GVRPDHHIFNIQIYAYV 307

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               ++EA     KM   G+ PD ++Y T+                              
Sbjct: 308 KCGRLDEAMLTFNKMRQQGLMPDIISYGTM------------------------------ 337

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
                + G CK G ++ AM    +M +  + P++VVF +LI GF      +  ++    M
Sbjct: 338 -----IDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEM 392

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            + G++P VV F+T++D     G + + + +FD M  A ++P++  ++ +  GY  AG+ 
Sbjct: 393 MDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKL 452

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +   +L  M   G+ PN V F T++                + M  +G+ P++ T  TL
Sbjct: 453 DEVLKLLDDMLSVGLKPNAVTFNTLL----------------DDMLSMGLKPDVATCNTL 496

Query: 387 LWGYGEAKQPWRAEELLQVMEE 408
           +       +  R E++L +  E
Sbjct: 497 I---DSCCEDGRIEDVLTLFRE 515



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 174/412 (42%), Gaps = 32/412 (7%)

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K V P   TY IL+   C    +  A+  + +++ +G++ +A+++  + R       T  
Sbjct: 7   KKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSD 66

Query: 189 AEQMLFE-MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH--PNLVVFNS 245
           A  ++          P+  +  +++ G C E   E+A+  ++ M E   H  PN+V + +
Sbjct: 67  AMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTT 126

Query: 246 LIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +I GF      D V KA TL  E    G+ PDVVT ++I+D       M K +E+   M 
Sbjct: 127 VIHGFF---KEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMF 183

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
              I PD   ++ L  GY+ +G+ ++A  IL  M ++G  PN V ++ +I   C      
Sbjct: 184 DKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHT 243

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A  I   M +   NPN+ TY  LL GY           L+ +M + GVRP      +  
Sbjct: 244 EAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQI 303

Query: 423 DSWRAIGLAREAKRVLKSAEEDRQSMPNKKD-EIAVESIHRKQNLSASNSTFLQI----- 476
            ++   G   EA        + +  MP+       ++ + +   L A+ S F Q+     
Sbjct: 304 YAYVKCGRLDEAMLTFNKMRQ-QGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGL 362

Query: 477 -PGVVSSE---HNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQPMVV 524
            P +V      H  S   K            W   + LF      G++P VV
Sbjct: 363 SPDIVVFTNLIHGFSMYGK------------WEKAEELFYEMMDRGIRPTVV 402



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 149/338 (44%), Gaps = 55/338 (16%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G   EA  I N +I+    P + TY  L+     +     + +LI  + ++G+
Sbjct: 233 IDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGV 292

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD  +FN  I A  + G +DEAM  F KM+  G  P   +Y T+I G   +G+ + +  
Sbjct: 293 RPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAA-- 350

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               MSQ                 +C             +M+  G+ PD V +  L   +
Sbjct: 351 ----MSQ-----------------FC-------------QMIDDGLSPDIVVFTNLIHGF 376

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           + YG+  +AE++ +EM +  +RP       ++    KEG + +A      M    V PN+
Sbjct: 377 SMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNV 436

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N++I G+      D V K L  M   G+KP+ VTF+T++                DD
Sbjct: 437 VSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLL----------------DD 480

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           M+  G++PD+   + L       G   + E +LT  R+
Sbjct: 481 MLSMGLKPDVATCNTLIDSCCEDG---RIEDVLTLFRE 515



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 115/224 (51%), Gaps = 17/224 (7%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA   FN + ++G  P +I+Y T++  L +  R  + +S   ++  DG+ PD ++F
Sbjct: 310 GRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVF 369

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+  S  G  ++A ++F +M D G +PT   + T+I      GK  E+  L  LM  
Sbjct: 370 TNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPI 429

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
             +VKPN  +YN ++  +     ++E   ++  M++ G++P+AVT+NTL           
Sbjct: 430 -ASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTL----------- 477

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
                L +M +  ++P+  TC  ++   C++G +ED +     M
Sbjct: 478 -----LDDMLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREM 516



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 117/259 (45%), Gaps = 10/259 (3%)

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL-DIKDS 256
           + +V P   T  I++S  C  G +  A   L ++ +  +  N + F  +++    + + S
Sbjct: 6   SKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTS 65

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD---DMVKAG--IEPDIH 311
           D ++  +    + G  PDV +++ ++          KC+E  D    M + G    P++ 
Sbjct: 66  DAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEK---KCEEAVDLIHMMAEDGDHCPPNVV 122

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++ +  G+ +  E  KA ++   M   G+ P+VV   ++I G C    M +A  +  +M
Sbjct: 123 SYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQM 182

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
            +  I P+  TY +L+ GY  + Q   A  +L+ M   G  P   T  ++ D     G  
Sbjct: 183 FDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGH 242

Query: 432 REAKRVLKSAEEDRQSMPN 450
            EA+ +L S  + R + PN
Sbjct: 243 TEAREILNSMIQSRGN-PN 260



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 17/138 (12%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA  +F+ +     +P +++Y  ++       +   +L L+  +   G+KP+
Sbjct: 411 LFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPN 470

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ FN +++                 M   G KP  +T NTLI      G+ E+ L L +
Sbjct: 471 AVTFNTLLD----------------DMLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFR 514

Query: 124 LMSQDKNVKPNDRTYNIL 141
            M   K  K +  T NI+
Sbjct: 515 EMLS-KAAKTDTVTENII 531


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/452 (23%), Positives = 214/452 (47%), Gaps = 42/452 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L    +  E   +   ++  G+ P ++TYTTL+  L  + R      L ++++K G 
Sbjct: 138 LNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGC 197

Query: 61  KPDSILFNAMINACSESGNV---------------------------------------- 80
            P++I +  ++     +GN+                                        
Sbjct: 198 TPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRR 257

Query: 81  -DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
            DEA  +F++MK  G  PT  +Y +LI G+   GK EE+ +L   M  ++ V+PN  T+N
Sbjct: 258 EDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMV-NQGVQPNVVTFN 316

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           +L+   C +  + EA +++  M+  GI P+ +TYN+L   +   G+   A ++   M + 
Sbjct: 317 VLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSK 376

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+     ++++GYCK   +E+AM+    M ++   P++  + +L+ G          
Sbjct: 377 GCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDA 436

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            K   +M+ +G+  D+  +   ++     G + +  E+F+ +    I+ DI  F+ L  G
Sbjct: 437 KKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDG 496

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             +AG+ + A  +   + +  + P+VV +  +I  +C   ++ +A  +++KM + G  P+
Sbjct: 497 LCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPD 556

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
             TY TL+ G+ E+K+  +  ELL +M ++ V
Sbjct: 557 KITYATLIRGFFESKKLEKVVELLHMMVQRDV 588



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 112/468 (23%), Positives = 221/468 (47%), Gaps = 18/468 (3%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +  Y++N +   G  P   T   L+  L    R    L++++ + + G  PD + +  +I
Sbjct: 114 QVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLI 173

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK-- 129
                   + +A  +F +M+  GC P   TY TL+KG    G    +LKL Q M  D   
Sbjct: 174 KGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSL 233

Query: 130 ---NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
              N KP   +Y+I++ A C     +EA ++  +M   G+ P  ++Y +L   +   G+ 
Sbjct: 234 YGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKW 293

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+++  EM N  V+PN  T  +++   CKEG + +A   L  M +  + PNL+ +NSL
Sbjct: 294 EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSL 353

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I+GF  + D +   +    M   G +PDV+ ++ +++ +     + +  ++++ M++ G 
Sbjct: 354 IEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGK 413

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD+  +  L  G  + G+   A+ +   M+ YG+  ++ ++   ++G C    +  AM 
Sbjct: 414 RPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAME 473

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           ++ K+    I  +++ +  L+ G  +A +   A EL + + ++ ++P   T  ++   + 
Sbjct: 474 LFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFC 533

Query: 427 AIGLAREAKRVLKSAEED-------------RQSMPNKKDEIAVESIH 461
             G   +A  + +  E++             R    +KK E  VE +H
Sbjct: 534 RGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLH 581



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 145/306 (47%), Gaps = 1/306 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA  +FN ++ +G +P ++T+  L+  L ++ +      L+  + + G+ P+ + +
Sbjct: 291 GKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTY 350

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N++I      G+++ A ++F  M   GC+P    Y  LI GY    K EE++KL   M Q
Sbjct: 351 NSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQ 410

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
               +P+ +TY  L+        + +A  +   M   GI  D   Y        + G  +
Sbjct: 411 VGK-RPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLF 469

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++  ++++  ++ +      ++ G CK G +E A     ++ + E+ P++V +N +I
Sbjct: 470 EAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMI 529

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             F         +     ME+ G  PD +T++T++  +  +  + K  E+   MV+  + 
Sbjct: 530 HEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 589

Query: 308 PDIHVF 313
            D+++ 
Sbjct: 590 LDVNIL 595



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 130/275 (47%), Gaps = 1/275 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L  +GK  EA  +   +I+ G  P L+TY +L+          S   L   +   G 
Sbjct: 319 IDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGC 378

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD I +  +IN   ++  V+EAMK++  M   G +P   TY  L+ G    GK  ++ K
Sbjct: 379 EPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKK 438

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L  +M +   +  +   Y I +   C    + EA  +  K+ +  I+ D   +N L    
Sbjct: 439 LFGVM-KVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGL 497

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A ++  ++   +++P+  T  I++  +C+ G +  A     +M++    P+ 
Sbjct: 498 CKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDK 557

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           + + +LI+GF + K  + V + L +M +  V  DV
Sbjct: 558 ITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 592



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 102/231 (44%), Gaps = 8/231 (3%)

Query: 216 CKEGNME--DAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
           CK GN+    A +F + M      P L  F  L+ G   IK    V      M   G+ P
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           D  T + +++   +   +G+   +   +++ G  PDI  ++ L KG        KA  + 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE----IGIN--PNLKTYETLL 387
           T M+K G  PN + + T++ G C    +  A+ ++++M       GIN  P + +Y  ++
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
               + ++   A +L + M+ +G+ P   +   +   +   G   EAKR+ 
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLF 300



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 5/143 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G   EA  +FN L     +  +  +  L+  L +  + ++   L  K+ ++ +
Sbjct: 459 LNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEEL 518

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD + +N MI+     G V +A  +FQKM+ +GC P   TY TLI+G+    K E+ ++
Sbjct: 519 QPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVE 578

Query: 121 LLQLMSQ-----DKNVKPNDRTY 138
           LL +M Q     D N+  ++R +
Sbjct: 579 LLHMMVQRDVSLDVNILRHNRRH 601


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 204/422 (48%), Gaps = 40/422 (9%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G+G+   A  + + ++  G  P ++TYT L+ A  ++  +K  + L+ ++   G  PD
Sbjct: 166 LCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPD 225

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I +N ++N   + G VD+A++  + +   GC+P T +YN ++KG     + E++ KL+ 
Sbjct: 226 IITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMA 285

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            MSQ K   PN  T+N+L+   C +  +E A  V+ ++   G  P++++YN         
Sbjct: 286 EMSQ-KGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNP-------- 336

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                                      I+  +CK+  M+ AM F+  M     +P++V +
Sbjct: 337 ---------------------------ILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSY 369

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+L+       + D   + L  +++ G  P +++++T++D  + AG   +  E+ ++MV 
Sbjct: 370 NTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVT 429

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G++PDI  +S ++ G  R    ++A      ++  G+ PN V++  ++ G C   +   
Sbjct: 430 KGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHN 489

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK----KSTIQ 419
           A+ ++  M   G  PN  TY  L+ G         A ELL  +  +GV  K    K+ I+
Sbjct: 490 AIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKGLINKAAIR 549

Query: 420 LV 421
           L+
Sbjct: 550 LL 551



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 204/435 (46%), Gaps = 9/435 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  EA  +          P ++ Y  +VA      +  +   L++ +    M+PD
Sbjct: 104 LCASGRTAEARRVL-----AACEPDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPD 155

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           S  +N +I      G    A+ +   M   GC P   TY  L++        ++++KLL 
Sbjct: 156 SYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLD 215

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + K   P+  TYN++V   C +  +++A   +  + + G +P+ V+YN + +     
Sbjct: 216 EM-RAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTA 274

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                AE+++ EM      PN  T  +++S  C+ G +E AM  L ++ +    PN + +
Sbjct: 275 ERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSY 334

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N ++  F   K  D     + LM   G  PD+V+++T++ A    G +    E+   +  
Sbjct: 335 NPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKD 394

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G  P +  ++ +  G  +AG+ ++A  +L  M   G+ P+++ ++T+ SG C   +++ 
Sbjct: 395 KGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEE 454

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+  + K+ ++GI PN   Y  +L G  + ++   A +L   M   G  P +ST  ++ +
Sbjct: 455 AIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIE 514

Query: 424 SWRAIGLAREAKRVL 438
                GL +EA+ +L
Sbjct: 515 GLTYEGLVKEARELL 529



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 192/400 (48%), Gaps = 18/400 (4%)

Query: 38  ALTRQKRFKSILSLISKVEKDGMKPDSIL--FNAMINACSESGNVDEAMKIFQKMKDSGC 95
            L R+   +  L L+  +   G++P +      A+I     SG   EA ++      + C
Sbjct: 68  GLVRRGDLEEALRLVESMS--GLEPSAAPGPCAALIKKLCASGRTAEARRVL-----AAC 120

Query: 96  KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
           +P    YN ++ GY   G+ + + +L+     D  ++P+  TYN L+R  C +     A 
Sbjct: 121 EPDVMAYNAMVAGYCVTGQLDAARRLV----ADMPMEPDSYTYNTLIRGLCGRGRTGNAL 176

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
            V+  M+  G  PD VTY  L  A  +     +A ++L EM+     P+  T  ++V+G 
Sbjct: 177 VVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGI 236

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C+EG ++DA+ FL  +      PN V +N ++KG    +  +  +K +  M + G  P+V
Sbjct: 237 CQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNV 296

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           VTF+ ++      GL+    E+ D + K G  P+   ++ +   + +  +  +A + +  
Sbjct: 297 VTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVEL 356

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M   G +P++V + T+++  C   ++  A+ +  ++ + G  P L +Y T++ G  +A +
Sbjct: 357 MVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGK 416

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
              A ELL  M  KG++P   T   ++      GL RE +
Sbjct: 417 TKEALELLNEMVTKGLQPDIITYSTISS-----GLCREDR 451



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 68/306 (22%), Positives = 157/306 (51%), Gaps = 1/306 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  +G+  +A      L   G  P  ++Y  ++  L   +R++    L++++ + G 
Sbjct: 233 VNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGY 292

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + FN +I+     G V+ AM++  ++   GC P + +YN ++  +    K + ++ 
Sbjct: 293 PPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMA 352

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            ++LM   +   P+  +YN L+ A C    ++ A  +++++   G  P  ++YNT+    
Sbjct: 353 FVELMVS-RGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGL 411

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+T  A ++L EM    ++P+  T   I SG C+E  +E+A+R   +++++ + PN 
Sbjct: 412 TKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNT 471

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V++N+++ G    +++         M   G  P+  T++ +++  +  GL+ + +E+  +
Sbjct: 472 VLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGE 531

Query: 301 MVKAGI 306
           +   G+
Sbjct: 532 LCSRGV 537



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/375 (22%), Positives = 158/375 (42%), Gaps = 40/375 (10%)

Query: 97  PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ-DKNVKPNDRTYNILVRAWCSKNSIEEAW 155
           P  +  N  ++G    G  EE+L+L++ MS  + +  P       L++  C+     EA 
Sbjct: 57  PHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPG--PCAALIKKLCASGRTAEAR 114

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ--------NNQVR----- 202
            V+     +  +PD + YN +   Y   G+   A +++ +M         N  +R     
Sbjct: 115 RVL-----AACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPMEPDSYTYNTLIRGLCGR 169

Query: 203 -------------------PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                              P+  T  I++   CK    + AM+ L  M+     P+++ +
Sbjct: 170 GRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITY 229

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N ++ G       D   + L  +   G +P+ V+++ ++    +A      +++  +M +
Sbjct: 230 NVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQ 289

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G  P++  F++L     R G  + A  +L  + KYG  PN + +  ++  +C   KM R
Sbjct: 290 KGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDR 349

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           AM+  E M   G  P++ +Y TLL       +   A ELL  +++KG  P   +   V D
Sbjct: 350 AMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVID 409

Query: 424 SWRAIGLAREAKRVL 438
                G  +EA  +L
Sbjct: 410 GLTKAGKTKEALELL 424


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 201/415 (48%), Gaps = 1/415 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++E+  +P +  Y  L+    +  R      ++ ++      PD++ +N MI +    G 
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D A+K+  ++    C+PT  TY  LI+     G  +E+LKL+  M   + +KP+  TYN
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM-LSRGLKPDMFTYN 267

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++R  C +  ++ A+ +V  +   G +PD ++YN L RA    G+    E+++ +M + 
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           +  PN  T  I+++  C++G +E+AM  L  MKE  + P+   ++ LI  F      D  
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            + L  M   G  PD+V ++T++      G   +  EIF  + + G  P+   ++ +   
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
              +G+  +A  ++  M   G+ P+ + + ++IS  C    +  A  +   M     +P+
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           + TY  +L G+ +A +   A  +L+ M   G RP ++T  ++ +     G   EA
Sbjct: 508 VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEA 562



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 194/405 (47%), Gaps = 42/405 (10%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NI++G    +GK   A  + N L+ +  +PT+ITYT L+ A   +      L L+ ++  
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+KPD   +N +I    + G VD A ++ + ++  GC+P   +YN L++   N GK EE
Sbjct: 257 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 316

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
             KL+  M  +K   PN  TY+IL+   C    IEEA N++  M   G+ PDA +Y+ L 
Sbjct: 317 GEKLMTKMFSEK-CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL- 374

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
                                             ++ +C+EG ++ A+ FL  M      
Sbjct: 375 ----------------------------------IAAFCREGRLDVAIEFLETMISDGCL 400

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P++V +N+++        +D   +    + E G  P+  +++T+  A  S+G   +   +
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 460

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
             +M+  GI+PD   ++ +     R G   +A  +L  MR    HP+VV +  V+ G+C 
Sbjct: 461 ILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCK 520

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           A +++ A+++ E M   G  PN  TY  L+ G G A   +RAE +
Sbjct: 521 AHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG--YRAEAM 563



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/398 (24%), Positives = 192/398 (48%), Gaps = 2/398 (0%)

Query: 41  RQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS 100
           R   +   L L+  + + G  PD IL   +I       N+ +A+++ + ++  G +P   
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
            YN LI G+  + + +++ ++L  M + K+  P+  TYNI++ + CS+  ++ A  V+ +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRM-RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           +++   QP  +TY  L  A    G    A +++ EM +  ++P+  T   I+ G CKEG 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           ++ A   +  ++     P+++ +N L++  L+    +  +K +T M      P+VVT+S 
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++      G + +   +   M + G+ PD + +  L   + R G    A   L +M   G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
             P++V + TV++  C   K  +A+ I+ K+ E+G +PN  +Y T+      +    RA 
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            ++  M   G+ P + T   +       G+  EA  +L
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 94/198 (47%), Gaps = 1/198 (0%)

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C+ GN  +++  L  M     +P++++   LIKGF  +++     + + ++E+FG +PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
             ++ +++ +     +     + D M      PD   ++I+       G+   A  +L  
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           +      P V+ +T +I        +  A+ + ++M   G+ P++ TY T++ G  +   
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 396 PWRAEELLQVMEEKGVRP 413
             RA E+++ +E KG  P
Sbjct: 279 VDRAFEMVRNLELKGCEP 296


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/484 (24%), Positives = 236/484 (48%), Gaps = 39/484 (8%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLI-SKVEKDGMKPDSILFNAMINACSESGNVDE 82
           G  PT++TY+T +  L R    +S L  + S +  +G+  +   +NA+I+   + G +DE
Sbjct: 285 GESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGL-VNVYCYNAIIHGLCKKGELDE 343

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN-------- 134
           A+K+ ++MK  G  P   TY+ LI G+   G  E+ L L++ M    N++P+        
Sbjct: 344 ALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYS-NMEPSLVSYSSLF 402

Query: 135 --------------------------DRT-YNILVRAWCSKNSIEEAWNVVYKMVASGIQ 167
                                     D+T Y+IL++ +C +  ++ A  ++ +MV + + 
Sbjct: 403 HGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLA 462

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
           PD   + +L   + + G    A +    M    + P+  TC +I+  +C+EG +E+A+  
Sbjct: 463 PDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNL 522

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
           +  M+   + PNL  +N++I      + S+   +   LM +  V P VV +ST++D ++ 
Sbjct: 523 MNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAK 582

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
                K   ++  M+K G+ PD+  ++IL           +A ++   M + G+ P+ + 
Sbjct: 583 QSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKIS 642

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           +T+VI+G+C    M++A +++ +M + G  P + TY +L+ GY +  +   A+ L+  M+
Sbjct: 643 YTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMK 702

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLS 467
            KG+ P   T  ++  + R  G   +A  +L   +E+   +P+    + +E + + + L 
Sbjct: 703 RKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKEN-GVLPDHMTYMMLEWLLKAKKLK 761

Query: 468 ASNS 471
              S
Sbjct: 762 TRRS 765



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 181/373 (48%), Gaps = 5/373 (1%)

Query: 20  LIEE----GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           LIEE       P+L++Y++L   L +++     L +   +   G K D   ++ +I    
Sbjct: 382 LIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFC 441

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
             G++D A K+ ++M  +   P  S + +L+ G+  +G    +L+   +M +   + P+ 
Sbjct: 442 MQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEG-GILPSI 500

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            T N+++ A C +  +EEA N++ +M   GI P+  TYN +     +  ++ RA ++   
Sbjct: 501 ATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPL 560

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M    V P+      ++ G+ K+ N + A+    RM ++ V P++V +  LI        
Sbjct: 561 MLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSR 620

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
                     M E G+ PD +++++++  +   G M K   +F++M++ G  P +  ++ 
Sbjct: 621 MCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTS 680

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  GY +      A+ ++  M++ G+ P+VV +  +I+       + +A+ +  +M E G
Sbjct: 681 LVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENG 740

Query: 376 INPNLKTYETLLW 388
           + P+  TY  L W
Sbjct: 741 VLPDHMTYMMLEW 753



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/445 (22%), Positives = 201/445 (45%), Gaps = 44/445 (9%)

Query: 12  EAHYIFNCLIEEGHRP--TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNA 69
           +A  +F  L+E       ++I +  L+         ++ + +  + +K G++  +   N 
Sbjct: 160 DAFELFPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNF 219

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY--GNVGKPE----ESLKLLQ 123
           ++   +E+   +    +F++MK +G  P   TY  ++  Y  GN G+ +    ++ ++L+
Sbjct: 220 LLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILE 279

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M ++    P   TY+  +   C    +E A + V  ++++    +   YN +     + 
Sbjct: 280 EMERNGE-SPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKK 338

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           GE   A ++L EM++  + P+  T  I++ G+CK+G++E  +  +  MK   + P+LV +
Sbjct: 339 GELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSY 398

Query: 244 NSLIKGFLDIKDSD--------------------------------GVDKALTLMEEF-- 269
           +SL  G    + SD                                 +D A  LMEE   
Sbjct: 399 SSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVR 458

Query: 270 -GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
             + PD   F +++  +   GL     E F+ M++ GI P I   +++   + R G  ++
Sbjct: 459 NNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEE 518

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A +++  M+  G+ PN+  +  VI+  C   K +RA+ ++  M +  + P++  Y TL+ 
Sbjct: 519 ALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLID 578

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRP 413
           G+ +     +A  L   M + GV P
Sbjct: 579 GFAKQSNSQKALMLYARMLKIGVTP 603



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 1/207 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  + K   A  +F  +++    P+++ Y+TL+    +Q   +  L L +++ K G+
Sbjct: 542 INRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGV 601

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + +  +IN       + EA  +F+KM ++G  P   +Y ++I G+  +G   ++  
Sbjct: 602 TPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWA 661

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M Q  ++ P   TY  LV  +C  N I+ A  ++ +M   GI PD VTYN L  A+
Sbjct: 662 LFNEMLQRGHL-PTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAH 720

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERT 207
            + G   +A +ML EM+ N V P+  T
Sbjct: 721 RRRGNLDKALEMLNEMKENGVLPDHMT 747



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/340 (22%), Positives = 153/340 (45%), Gaps = 7/340 (2%)

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
            ++ LIK +      E ++ +  L ++   ++ + R+ N L++     N  E   ++  +
Sbjct: 181 VFDLLIKVFAANSMLENAVDVF-LQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEE 239

Query: 161 MVASGIQPDAVTYNTLARAYAQ--YGE----TYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
           M ++G  P+  TY  +   Y +  +GE    T +A ++L EM+ N   P   T    + G
Sbjct: 240 MKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYG 299

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
            C+ G +E A+ F+  +       N+  +N++I G     + D   K L  M+  G+ PD
Sbjct: 300 LCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPD 359

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           V T+S ++  +   G + K   + ++M  + +EP +  +S L  G  +      +  I  
Sbjct: 360 VYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFR 419

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            +   G   +   ++ +I G+C    +  A  + E+M    + P+   +E+L+ G+ +  
Sbjct: 420 DLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMG 479

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
               A E   +M E G+ P  +T  ++ D+    G   EA
Sbjct: 480 LWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEA 519



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 62/315 (19%), Positives = 141/315 (44%), Gaps = 10/315 (3%)

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           L+   K+   +   +++L++ + + + +E A +V  +   +G++    + N L +  A+ 
Sbjct: 168 LLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEA 227

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM-------EDAMRFLYRMKELEV 236
                   +  EM++    PN  T  I+++ YCK GN          A   L  M+    
Sbjct: 228 NRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCK-GNFGEADIDTRQATEILEEMERNGE 286

Query: 237 HPNLVVFNSLIKGFLDIKDSD-GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
            P +V +++ I G   +   +  +D   +L+   G+  +V  ++ I+      G + +  
Sbjct: 287 SPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGL-VNVYCYNAIIHGLCKKGELDEAL 345

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           ++ ++M   GI PD++ +SIL  G+ + G+ +K   ++  M+   + P++V ++++  G 
Sbjct: 346 KVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGL 405

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C       ++ I+  +   G   +   Y  L+ G+        A +L++ M    + P  
Sbjct: 406 CKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDP 465

Query: 416 STIQLVADSWRAIGL 430
           S  + +   +  +GL
Sbjct: 466 SNFESLVHGFCKMGL 480



 Score = 38.5 bits (88), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 39/180 (21%), Positives = 73/180 (40%), Gaps = 26/180 (14%)

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV----KAGIEP----------- 308
           T M+++G    +  F T+++  + AG+  +   +  D+V    K  ++            
Sbjct: 113 TTMKKYGFSRSIDAFRTVVNVLALAGMHMEVYALLRDIVCYYNKVNLDAFELFPILLESP 172

Query: 309 -----DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
                 + VF +L K +      + A  +    +K G+  +      ++     A + + 
Sbjct: 173 KDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREF 232

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGY-----GEAKQPWR-AEELLQVMEEKGVRPKKST 417
             S++E+M   G  PN+ TY  ++  Y     GEA    R A E+L+ ME  G  P   T
Sbjct: 233 LRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVT 292


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 202/413 (48%), Gaps = 6/413 (1%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +PT+  Y  ++ AL  + RF+ I  + S ++KDGM+P+   +N ++ A  ++  VD A K
Sbjct: 143 KPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHK 202

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +  +M   GC P   +Y TLI     +GK +E+ +L        +  P+   YN L+   
Sbjct: 203 LLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAM------SFTPSVPVYNALINGV 256

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C + + EEA+ ++ +M+  GI P+ ++Y T+  A +  G    +  +L +M      PN 
Sbjct: 257 CKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   ++ G+  +G   +A+ F  RM    V PN+V +N+L+ G    +           
Sbjct: 317 HTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ 376

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           ME  G  P+V T+S ++D ++ AG +    E+++ M+  G  P++  ++ +     R   
Sbjct: 377 MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSM 436

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A  ++ +M+     PN V F T I G C + ++  A+ ++++M   G  PN  TY  
Sbjct: 437 FNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNE 496

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           LL    + ++   A  L++ ME +G+     T   +   +   G+  EA  +L
Sbjct: 497 LLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELL 549



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 193/419 (46%), Gaps = 42/419 (10%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P++  Y  L+  + ++  F+    L+ ++   G+ P+ I +  +INA S++GNV+ ++ +
Sbjct: 244 PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAV 303

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             KM   GC P   T+ +LIKG+   G   E+L     M ++  V PN   YN L+   C
Sbjct: 304 LAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIRE-GVVPNVVAYNALMHGLC 362

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ--------------- 191
           SK S+ +A +V  +M  +G  P+  TY+ L   YA+ G+   A +               
Sbjct: 363 SKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVV 422

Query: 192 --------------------MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
                               ++  MQ     PN  T    + G C  G ++ A++   +M
Sbjct: 423 AYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQM 482

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
                 PN   +N L+   L  +        +  ME  G++ ++VT++TI+  +  AG++
Sbjct: 483 GNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGML 542

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
           G+  E+   MV  G +PD    +I+   Y + G+   A  ++  +     HP+++ +T++
Sbjct: 543 GEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSL 602

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL------WGYGEAKQPWRAEELLQ 404
           ISG C  + ++ A+    +M   GI+PN+ T+  L+       G+  A Q   A  ++Q
Sbjct: 603 ISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDASSIMQ 661



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 201/453 (44%), Gaps = 48/453 (10%)

Query: 25  HRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAM 84
           H P  +TY  ++  L  ++    +  L+ +++ +G+     LF ++I +   +G+ ++A+
Sbjct: 74  HTP--LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQAL 131

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
           K F +M+D   KPT   YN ++    +  + +    +   M +D  ++PN  TYNIL++A
Sbjct: 132 KTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKD-GMEPNVFTYNILLKA 190

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE-------------- 190
            C  N ++ A  ++ +M + G  PD V+Y TL  +  + G+   A               
Sbjct: 191 LCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYN 250

Query: 191 ----------------QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
                           Q+L EM N  + PN  +   I++     GN+E ++  L +M   
Sbjct: 251 ALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFAR 310

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLM 291
              PNL  F SLIKGF       G  +AL   +     GV P+VV ++ +M    S   +
Sbjct: 311 GCSPNLHTFTSLIKGFF---LKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSL 367

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
           G    +F+ M   G  P++  +S L  GY +AG+   A  +   M  +G HPNVV +T +
Sbjct: 368 GDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCM 427

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY-GEAKQPWRAEELLQVMEEKG 410
           +   C      +A  + E M      PN  T+ T + G  G  +  W A ++   M   G
Sbjct: 428 VDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDW-AIKVFDQMGNSG 486

Query: 411 VRPKKSTIQLVADSW-------RAIGLAREAKR 436
             P  +T   + DS         A GL ++ + 
Sbjct: 487 CFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEH 519



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/410 (24%), Positives = 182/410 (44%), Gaps = 6/410 (1%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           I++ + ++G  P + TY  L+ AL +  R      L+ ++   G  PD + +  +I++  
Sbjct: 168 IYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLC 227

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G V EA ++          P+   YN LI G       EE+ +LL  M  +K + PN 
Sbjct: 228 KLGKVKEARELAMSF-----TPSVPVYNALINGVCKEYTFEEAFQLLDEM-MNKGIDPNV 281

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            +Y  ++ A     ++E +  V+ KM A G  P+  T+ +L + +   G ++ A      
Sbjct: 282 ISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDR 341

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M    V PN      ++ G C + ++ DA+    +M+     PN+  +++LI G+    D
Sbjct: 342 MIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGD 401

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            DG  +    M   G  P+VV ++ ++D      +  +   + ++M      P+   F+ 
Sbjct: 402 LDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNT 461

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
             KG   +G    A  +   M   G  PN   +  ++       +   A  + + M   G
Sbjct: 462 FIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRG 521

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           I  NL TY T+++GY  A     A ELL  M  +G +P   T+ +V D++
Sbjct: 522 IELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAY 571



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 124/236 (52%), Gaps = 1/236 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  ++N +I  G  P ++ YT +V  L R   F     LI  ++ +   P+++ FN  I 
Sbjct: 405 ASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIK 464

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
               SG VD A+K+F +M +SGC P T+TYN L+       +  E+  L++ M + + ++
Sbjct: 465 GLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDM-EHRGIE 523

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
            N  TYN ++  +C    + EA  ++ KMV  G +PDA+T N +  AY + G+   A Q+
Sbjct: 524 LNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQL 583

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           +  +   +  P+      ++SG C    +E+A+ +L RM    + PN+  +N L++
Sbjct: 584 MDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVR 639



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 160/359 (44%), Gaps = 13/359 (3%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +   G  P L T+T+L+     +      L    ++ ++G+ P+ + +NA+++      +
Sbjct: 307 MFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRS 366

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           + +A+ +F +M+ +GC P   TY+ LI GY   G  + + ++   M       PN   Y 
Sbjct: 367 LGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMIT-HGCHPNVVAYT 425

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            +V   C  +   +A+ ++  M      P+ VT+NT  +     G    A ++  +M N+
Sbjct: 426 CMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNS 485

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              PN  T   ++    K+    +A   +  M+   +  NLV +N++I G+     +  +
Sbjct: 486 GCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYC---CAGML 542

Query: 260 DKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
            +AL L+ +    G KPD +T + ++DA+   G +    ++ D +      PDI  ++ L
Sbjct: 543 GEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSL 602

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS------GWCNAVKMQRAMSIYE 369
             G       ++A   L  M   G+ PNV  +  ++       G   AV+   A SI +
Sbjct: 603 ISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDASSIMQ 661



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 66/296 (22%), Positives = 137/296 (46%), Gaps = 5/296 (1%)

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +L+  + ++  K+ K    TY +++    S+  ++    ++ +M   GI      + ++ 
Sbjct: 59  ALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVI 118

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
            +Y + G + +A +  + MQ+ +V+P  +    I+     E   +        MK+  + 
Sbjct: 119 GSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGME 178

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           PN+  +N L+K        DG  K L  M   G  PD V+++T++ +    G + + +E+
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL 238

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
                     P + V++ L  G  +    ++A  +L  M   G+ PNV+ +TT+I+   +
Sbjct: 239 -----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSD 293

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           A  ++ ++++  KM   G +PNL T+ +L+ G+        A +    M  +GV P
Sbjct: 294 AGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVP 349



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 1/175 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G G+   A  +F+ +   G  P   TY  L+ +L + +RF     L+  +E  G++ +
Sbjct: 466 LCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELN 525

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +I     +G + EA+++  KM   G KP   T N +I  Y   GK   +++L+ 
Sbjct: 526 LVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMD 585

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
            +S  K   P+   Y  L+   C+   +EEA   + +M++ GI P+  T+N L R
Sbjct: 586 RLSAGK-WHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVR 639



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 72/165 (43%)

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           +T+  +++  +S   M   Q +   M   GI     +F  +   Y RAG  ++A      
Sbjct: 77  LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYR 136

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M+ + V P V ++  ++    +  + Q    IY  M + G+ PN+ TY  LL    +  +
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
              A +LL  M  KG  P + +   +  S   +G  +EA+ +  S
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMS 241


>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/489 (23%), Positives = 230/489 (47%), Gaps = 34/489 (6%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +P EA  +   +   G  P+++TY +L++A  R       + L S++ K G+KPD   + 
Sbjct: 341 RPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYT 400

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK-------- 120
            +++   ++G  D AMK+F++M+ +GC+P   T+N LIK +GN G   E +K        
Sbjct: 401 TLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKIC 460

Query: 121 -----------LLQLMSQD----------KNVK-----PNDRTYNILVRAWCSKNSIEEA 154
                      LL +  Q+          K +K     P   T+N L+ A+      ++A
Sbjct: 461 ECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQA 520

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
             +  +M+ +G+ PD  TYN +  A A+ G   ++E++L EM++ + +PNE T   ++  
Sbjct: 521 MAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHA 580

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           Y     +E        +    + P  V+  +L+  +         ++A   + E G  PD
Sbjct: 581 YANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPD 640

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           + T + ++  +    ++ K  EI + +  +G  P +  ++ L   Y R    +K+E IL 
Sbjct: 641 ITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILR 700

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            +   G+ P+++ F TVI  +C   +M+ A  I+ +M + G+ P++ TY T +  Y    
Sbjct: 701 EIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDS 760

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDE 454
               A ++++ M + G +P ++T   + D +  +    EA   + +      S+   ++ 
Sbjct: 761 MFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFISNLRNLDPSVTKDEER 820

Query: 455 IAVESIHRK 463
             +E +++K
Sbjct: 821 RLLERLNKK 829



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 202/410 (49%), Gaps = 5/410 (1%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           +++ L ++ R     SL+  +  DG+  D   + ++I A + +G   EA+ +F+K+++ G
Sbjct: 191 IISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEG 250

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI-EE 153
           C+PT  TYN ++  YG +G P   +  L    +   V P+  TYN L+ + C + S+ EE
Sbjct: 251 CRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISS-CRRGSLYEE 309

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A  V  +M A+G  PD VTYN L   Y +      A ++L EM+ +   P+  T   ++S
Sbjct: 310 AAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLIS 369

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
            Y ++G +++AM    +M +  + P++  + +L+ GF      D   K    M   G +P
Sbjct: 370 AYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQP 429

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           ++ TF+ ++    + G   +  ++F+++      PDI  ++ L   + + G   +   + 
Sbjct: 430 NICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVF 489

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M++ G  P    F T+IS +       +AM+IY +M + G+ P+L TY  +L      
Sbjct: 490 KEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARG 549

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
               ++E++L  M++   +P + T         A    +E +R+   AEE
Sbjct: 550 GLWEQSEKVLAEMKDGRCKPNELT---YCSLLHAYANGKEVERMSALAEE 596



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 106/455 (23%), Positives = 209/455 (45%), Gaps = 37/455 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L  +G+   A  + + L  +G    +  YT+L+ A     R++  + +  K+E++G 
Sbjct: 192 ISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGC 251

Query: 61  K------------------------------------PDSILFNAMINACSESGNVDEAM 84
           +                                    PD   +N +I++C      +EA 
Sbjct: 252 RPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAA 311

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
           ++F++MK +G  P   TYN L+  YG   +P E++++L+ M +     P+  TYN L+ A
Sbjct: 312 EVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEM-EASGFAPSIVTYNSLISA 370

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +     ++EA  +  +MV  GI+PD  TY TL   + + G+   A ++  EM+    +PN
Sbjct: 371 YARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPN 430

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   ++  +   GN  + M+    +K  E  P++V +N+L+  F        V     
Sbjct: 431 ICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFK 490

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M+  G  P+  TF+T++ A+S  G   +   I+  M+ AG+ PD+  ++ +     R G
Sbjct: 491 EMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGG 550

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
             +++E +L  M+     PN + + +++  + N  +++R  ++ E++    I P     +
Sbjct: 551 LWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLK 610

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           TL+  Y ++      E     + E+G  P  +T+ 
Sbjct: 611 TLVLVYSKSDLLTETERAFLELREQGFSPDITTLN 645



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 99/427 (23%), Positives = 204/427 (47%), Gaps = 1/427 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +F  +   G  P  +TY  L+    + +R +  + ++ ++E  G  P  + +N++I
Sbjct: 309 EAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLI 368

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +A +  G +DEAM++  +M   G KP   TY TL+ G+   GK + ++K+ + M +    
Sbjct: 369 SAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEM-RVAGC 427

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +PN  T+N L++   ++ +  E   V  ++      PD VT+NTL   + Q G       
Sbjct: 428 QPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSG 487

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  EM+     P   T   ++S Y + G  + AM    RM +  V P+L  +N+++    
Sbjct: 488 VFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALA 547

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                +  +K L  M++   KP+ +T+ +++ A+++   + +   + +++    IEP   
Sbjct: 548 RGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAV 607

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
           +   L   Y ++    + E     +R+ G  P++     ++S +     + +   I   +
Sbjct: 608 LLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFI 667

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
            + G  P+L TY +L++ Y   +   ++E++L+ +  KG++P   +   V  ++   G  
Sbjct: 668 KDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRM 727

Query: 432 REAKRVL 438
           +EA R+ 
Sbjct: 728 KEASRIF 734



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/368 (20%), Positives = 153/368 (41%), Gaps = 53/368 (14%)

Query: 96  KPTTSTYNTLIKGYG-NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
           KPT  T   + + +  N GKP          S  +      R  + L+      +S++E 
Sbjct: 77  KPTFRTRTRIGRSHDPNRGKP---------WSHHRLSTQGQRILDSLLNPEFDSSSLDEI 127

Query: 155 WNVVYKMVASGIQ--PDAVTYNTLA--RAYAQYGETYRAEQMLFEMQNNQVRPN---ERT 207
              +++  + G+    D+V+++ L   +    Y +   A  + + ++N +   +      
Sbjct: 128 LLQLFETSSDGLNFTSDSVSFDILGIIKGLVFYKKNELALCVFYFVRNREDFASILSNSV 187

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF----------------- 250
             +I+S   KEG    A   L+ ++   VH ++  + SLI  +                 
Sbjct: 188 VAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLE 247

Query: 251 --------------LDIKDSDG-----VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
                         L++    G     +   +  M+  GV PD+ T++T++ +     L 
Sbjct: 248 EEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLY 307

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            +  E+F++M  AG  PD   ++ L   Y ++  P++A  +L  M   G  P++V + ++
Sbjct: 308 EEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSL 367

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           IS +     +  AM +  +M + GI P++ TY TLL G+ +  +   A ++ + M   G 
Sbjct: 368 ISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGC 427

Query: 412 RPKKSTIQ 419
           +P   T  
Sbjct: 428 QPNICTFN 435



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 42/85 (49%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  IF  + + G  P +ITY T +A+      F   + ++  + K+G KP+   +
Sbjct: 725 GRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTY 784

Query: 68  NAMINACSESGNVDEAMKIFQKMKD 92
           N++I+   +    DEA      +++
Sbjct: 785 NSLIDWFCKLNRRDEASSFISNLRN 809


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 196/404 (48%), Gaps = 7/404 (1%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  PTL+TY +L+  L ++   + I SL  ++ K G+ P+  ++N++I+A  +  +  +
Sbjct: 268 KGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQ 327

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           AM I ++M  SGC P   T+NTLI G    G+V K E  L+     +  + + PN  +Y 
Sbjct: 328 AMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLR----EAIRRELNPNQLSYT 383

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+  +C +  +  A +++ +M+  G  PD VT+  L       G+   A  +  +M   
Sbjct: 384 PLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTER 443

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           QV P+     +++SG CK+  +  A   L  M E  V P+  V+ +LI GF+  ++    
Sbjct: 444 QVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDA 503

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            K    ME  GV+PD+V+ + ++  +   G+M +      +M K G  PD   ++ +  G
Sbjct: 504 RKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISG 563

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y + G    A   L  M K    PNVV ++++I+G+C       A  ++  M    ++PN
Sbjct: 564 YAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPN 623

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           + TY  L+    +  +  RA    + M      P   T+  + +
Sbjct: 624 VVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVN 667



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 187/401 (46%), Gaps = 1/401 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P ++ Y  L+    R+      L L+ ++E  G  P  + + ++IN   + G++++ 
Sbjct: 234 GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKI 293

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
             +F +M+  G  P    YN++I          +++ +L+ M       P+  T+N L+ 
Sbjct: 294 GSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFA-SGCDPDIITFNTLIT 352

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C +  + +A + + + +   + P+ ++Y  L   +   GE   A  +L EM      P
Sbjct: 353 GLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTP 412

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T G ++ G    G + +A+    +M E +V P++ ++N LI G             L
Sbjct: 413 DVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNIL 472

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M E  V+PD   ++T++D +  +  +G  ++IF+ M   G+ PDI   + + KGY + 
Sbjct: 473 EEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQF 532

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G   +A   +++MRK G  P+   +TTVISG+     +  A+     M +    PN+ TY
Sbjct: 533 GMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTY 592

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
            +L+ GY +      AE L   M+ + + P   T  ++  S
Sbjct: 593 SSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGS 633



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 207/453 (45%), Gaps = 8/453 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +LV + +  +A  +++ ++ E       +   LV  L  + R +  L LI      G 
Sbjct: 176 LKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGC 235

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + +N +I+     G++   + +  +M+  G  PT  TY +LI   G  G  E+ + 
Sbjct: 236 IPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEK-IG 294

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L L  + + + PN + YN ++ A C   S  +A  ++ +M ASG  PD +T+NTL    
Sbjct: 295 SLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGL 354

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G   +AE  L E    ++ PN+ +   ++ G+C  G +  A   L  M      P++
Sbjct: 355 CHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDV 414

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V F +LI G +    +  V +AL +   M E  V PDV  ++ ++       ++   + I
Sbjct: 415 VTFGALIHGLVV---AGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNI 471

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            ++M++  ++PD  V++ L  G++R+     A  I   M   GV P++V    +I G+C 
Sbjct: 472 LEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQ 531

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              M  A+     M ++G  P+  TY T++ GY +      A   L  M ++  +P   T
Sbjct: 532 FGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVT 591

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
              + + +   G    A+ +  + + +  S PN
Sbjct: 592 YSSLINGYCKTGDTDSAEGLFANMQAEALS-PN 623



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 188/419 (44%), Gaps = 16/419 (3%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKV-EKDGMKPDSILFNAMINACSESGNVDE 82
           G  PT      LVAA            +  ++ E+ G  P+    N ++    E    D+
Sbjct: 128 GAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDD 187

Query: 83  AMKIFQKM--KDSGCKPTTSTYNT--LIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
           A K++ +M  +DSG       Y+T  L++G    G+ EE LKL++         P+   Y
Sbjct: 188 ARKLYDEMLGEDSG----ADNYSTCVLVRGLCLEGRVEEGLKLIE-ARWGAGCIPHVVFY 242

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           N+L+  +C +  +     ++ +M A G  P  VTY +L     + G+  +   +  EM+ 
Sbjct: 243 NVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRK 302

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
             + PN +    ++   CK  +   AM  L +M      P+++ FN+LI G         
Sbjct: 303 RGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCH---EGH 359

Query: 259 VDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
           V KA   + E     + P+ ++++ ++  +   G +    ++  +M+  G  PD+  F  
Sbjct: 360 VRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGA 419

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  G V AG+  +A  +   M +  V P+V ++  +ISG C    +  A +I E+M E  
Sbjct: 420 LIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKN 479

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           + P+   Y TL+ G+  ++    A ++ + ME KGVRP   +   +   +   G+  EA
Sbjct: 480 VQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEA 538



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 188/401 (46%), Gaps = 4/401 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT + ++TL+  L R +RF ++   +  +   G  P      A++ A +++G + +A  +
Sbjct: 96  PTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDM 155

Query: 87  FQKMKDS-GCKPTTSTYNTLIKGYGNVGKPEESLKLL-QLMSQDKNVKPNDRTYNILVRA 144
            +++++  G  P  +  N L+K      + +++ KL  +++ +D     ++ +  +LVR 
Sbjct: 156 CERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGA--DNYSTCVLVRG 213

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
            C +  +EE   ++     +G  P  V YN L   Y + G+  R   +L EM+     P 
Sbjct: 214 LCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPT 273

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T G +++   K+G++E        M++  + PN+ ++NS+I        +      L 
Sbjct: 274 LVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILK 333

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M   G  PD++TF+T++      G + K +    + ++  + P+   ++ L  G+   G
Sbjct: 334 QMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRG 393

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           E   A  +L  M   G  P+VV F  +I G   A K+  A+ + EKM E  + P++  Y 
Sbjct: 394 ELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYN 453

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            L+ G  +      A+ +L+ M EK V+P +     + D +
Sbjct: 454 VLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGF 494



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 92/407 (22%), Positives = 172/407 (42%), Gaps = 51/407 (12%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G   +A +     I     P  ++YT L+     +    +   L+ ++   G  PD
Sbjct: 354 LCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPD 413

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + F A+I+    +G V EA+ + +KM +    P  + YN LI G         +  +L+
Sbjct: 414 VVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILE 473

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  +KNV+P++  Y  L+  +    ++ +A  +   M   G++PD V+ N + + Y Q+
Sbjct: 474 EM-LEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQF 532

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A   +  M+     P+E T   ++SGY K+GN+  A+R+L  M + +  PN+V +
Sbjct: 533 GMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTY 592

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           +SLI G+    D+D  +     M+   + P+VVT++ ++ +      + +    F+ M+ 
Sbjct: 593 SSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLL 652

Query: 304 AGIEPDIHVFSILAKGYVRA--------------------------------GEPQKA-- 329
               P+      L  G                                    G+P+ +  
Sbjct: 653 NHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAY 712

Query: 330 ESILTS----------------MRKYGVHPNVVMFTTVISGWCNAVK 360
            +I+ S                M K G  PN + F +++ G+C+  K
Sbjct: 713 NAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 759



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/330 (22%), Positives = 140/330 (42%), Gaps = 3/330 (0%)

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS-GIQPDAVTYNTLARAY 180
           LQ MS      P       LV A+     + +A ++  ++    G  P+    N L +  
Sbjct: 121 LQSMSL-AGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLL 179

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A ++  EM       +  +  ++V G C EG +E+ ++ +         P++
Sbjct: 180 VEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHV 239

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N LI G+    D       L  ME  G  P +VT+ ++++     G + K   +F +
Sbjct: 240 VFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLE 299

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M K G+ P++ +++ +     +     +A  IL  M   G  P+++ F T+I+G C+   
Sbjct: 300 MRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGH 359

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +++A     +     +NPN  +Y  L+ G+    +   A +LL  M  +G  P   T   
Sbjct: 360 VRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGA 419

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           +       G   EA  +++    +RQ  P+
Sbjct: 420 LIHGLVVAGKVSEA-LIVREKMTERQVFPD 448



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 118/309 (38%), Gaps = 55/309 (17%)

Query: 2   NILV-GKGKPH---EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N+L+ G  K H    A  I   ++E+  +P    Y TL+    R +       +   +E 
Sbjct: 453 NVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEH 512

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G++PD +  NAMI    + G + EA+     M+  GC P   TY T+I GY   G    
Sbjct: 513 KGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNG 572

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +L+ L  M + K  KPN  TY+ L+  +C     + A  +   M A  + P+ VTY  L 
Sbjct: 573 ALRWLCDMIKRK-CKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILI 631

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY---------------------- 215
            +  +  +  RA      M  N   PN+ T   +V+G                       
Sbjct: 632 GSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKD 691

Query: 216 ----------------------------CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
                                       C+   + +A+ F  RM +    PN + F SL+
Sbjct: 692 ALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLL 751

Query: 248 KGFLDIKDS 256
            GF  +  S
Sbjct: 752 YGFCSVGKS 760


>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
          Length = 548

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 209/429 (48%), Gaps = 1/429 (0%)

Query: 6   GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
           G+  P +A  + N ++E+G +P + TYTTL++   +  + K+ + +  ++  +G KP+  
Sbjct: 81  GRLSPPDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNIC 140

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            FNA+I      G   E MK+F+ +K   C P   T+NTL+  +G  G   E   + + M
Sbjct: 141 TFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEM 200

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
            +   V P   T+N L+ ++    S ++A  V  +M+ +G+ PD  +YN +  A A+ G 
Sbjct: 201 KRAGFV-PERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGL 259

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
             ++E++L EM++ + +PNE T   ++  Y     +E        +    + P  V+  +
Sbjct: 260 WKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKT 319

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           L+            ++A   + + G  PD+ T + ++  +    ++ K  EI D M + G
Sbjct: 320 LVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGG 379

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
             P +  ++ L   Y R+   +++E IL  +   G+ P+++ + TVI  +C   +M+ A 
Sbjct: 380 FTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDAS 439

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            +  +M E G  P++ TY T +  Y        A +++  M + G +P +ST   + D +
Sbjct: 440 RVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWY 499

Query: 426 RAIGLAREA 434
             +    EA
Sbjct: 500 CKLNRRDEA 508



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 175/368 (47%), Gaps = 4/368 (1%)

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +A+++  +M + G KP   TY TL+ G+   GK + ++++ + M +++  KPN  T+N L
Sbjct: 87  DALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEM-RNEGCKPNICTFNAL 145

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           ++   ++    E   V   +      PD VT+NTL   + Q G       +  EM+    
Sbjct: 146 IKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGF 205

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            P   T   ++S Y + G+ + AM    RM E  V+P+L  +N+++            +K
Sbjct: 206 VPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEK 265

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            L  M++   KP+ +T+ +++ A+++   + +   + +++    IEP   +   L     
Sbjct: 266 VLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNS 325

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           +     + E     +R+ G  P++     ++S +     + +A  I + M   G  P+L 
Sbjct: 326 KCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLT 385

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY +L++ Y  +    R+EE+L+ +  KG+RP   +   V  ++   G  R+A RVL   
Sbjct: 386 TYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVL--- 442

Query: 442 EEDRQSMP 449
            E R+S P
Sbjct: 443 SEMRESGP 450



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/371 (20%), Positives = 161/371 (43%), Gaps = 36/371 (9%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  E   +F  +      P ++T+ TL++   +      +  +  ++++ G  P+   
Sbjct: 152 RGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDT 211

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           FN +I++ S  G+ D+AM ++++M ++G  P  S+YN ++      G  ++S K+L  M 
Sbjct: 212 FNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEM- 270

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIE---------------------------------- 152
           +D   KPN+ TY  L+ A+ +   IE                                  
Sbjct: 271 KDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLL 330

Query: 153 -EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
            E      ++   G  PD  T N +   Y +     +A ++L  M+     P+  T   +
Sbjct: 331 METERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSL 390

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           +  Y +  N E +   L  +    + P+++ +N++I  +          + L+ M E G 
Sbjct: 391 MYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGP 450

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            PD++T++T + ++++  +  +  ++   M+K G +P+   ++ +   Y +     +A  
Sbjct: 451 APDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASM 510

Query: 332 ILTSMRKYGVH 342
            + ++RK   H
Sbjct: 511 FVNNLRKLDPH 521


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 202/413 (48%), Gaps = 6/413 (1%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +PT+  Y  ++ AL  + RF+ I  + S ++KDGM+P+   +N ++ A  ++  VD A K
Sbjct: 143 KPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHK 202

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +  +M   GC P   +Y TLI     +GK +E+ +L        +  P+   YN L+   
Sbjct: 203 LLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAM------SFTPSVPVYNALINGV 256

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C + + EEA+ ++ +M+  GI P+ ++Y T+  A +  G    +  +L +M      PN 
Sbjct: 257 CKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   ++ G+  +G   +A+ F  RM    V PN+V +N+L+ G    +           
Sbjct: 317 HTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ 376

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           ME  G  P+V T+S ++D ++ AG +    E+++ M+  G  P++  ++ +     R   
Sbjct: 377 MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSM 436

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A  ++ +M+     PN V F T I G C + ++  A+ ++++M   G  PN  TY  
Sbjct: 437 FNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNE 496

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           LL    + ++   A  L++ ME +G+     T   +   +   G+  EA  +L
Sbjct: 497 LLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELL 549



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 185/396 (46%), Gaps = 36/396 (9%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P++  Y  L+  + ++  F+    L+ ++   G+ P+ I +  +INA S++GNV+ ++ +
Sbjct: 244 PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAV 303

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             KM   GC P   T+ +LIKG+   G   E+L     M ++  V PN   YN L+   C
Sbjct: 304 LAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIRE-GVVPNVVAYNALMHGLC 362

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ--------------- 191
           SK S+ +A +V  +M  +G  P+  TY+ L   YA+ G+   A +               
Sbjct: 363 SKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVV 422

Query: 192 --------------------MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
                               ++  MQ     PN  T    + G C  G ++ A++   +M
Sbjct: 423 AYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQM 482

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
                 PN   +N L+   L  +        +  ME  G++ ++VT++TI+  +  AG++
Sbjct: 483 GNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGML 542

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
           G+  E+   MV  G +PD    +I+   Y + G+   A  ++  +     HP+++ +T++
Sbjct: 543 GEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSL 602

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           ISG C  + ++ A+    +M   GI+PN+ T+  L+
Sbjct: 603 ISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 201/453 (44%), Gaps = 48/453 (10%)

Query: 25  HRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAM 84
           H P  +TY  ++  L  ++    +  L+ +++ +G+     LF ++I +   +G+ ++A+
Sbjct: 74  HTP--LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQAL 131

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
           K F +M+D   KPT   YN ++    +  + +    +   M +D  ++PN  TYNIL++A
Sbjct: 132 KTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKD-GMEPNVFTYNILLKA 190

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE-------------- 190
            C  N ++ A  ++ +M + G  PD V+Y TL  +  + G+   A               
Sbjct: 191 LCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYN 250

Query: 191 ----------------QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
                           Q+L EM N  + PN  +   I++     GN+E ++  L +M   
Sbjct: 251 ALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFAR 310

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLM 291
              PNL  F SLIKGF       G  +AL   +     GV P+VV ++ +M    S   +
Sbjct: 311 GCSPNLHTFTSLIKGFF---LKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSL 367

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
           G    +F+ M   G  P++  +S L  GY +AG+   A  +   M  +G HPNVV +T +
Sbjct: 368 GDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCM 427

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY-GEAKQPWRAEELLQVMEEKG 410
           +   C      +A  + E M      PN  T+ T + G  G  +  W A ++   M   G
Sbjct: 428 VDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDW-AIKVFDQMGNSG 486

Query: 411 VRPKKSTIQLVADSW-------RAIGLAREAKR 436
             P  +T   + DS         A GL ++ + 
Sbjct: 487 CFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEH 519



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/410 (24%), Positives = 182/410 (44%), Gaps = 6/410 (1%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           I++ + ++G  P + TY  L+ AL +  R      L+ ++   G  PD + +  +I++  
Sbjct: 168 IYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLC 227

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G V EA ++          P+   YN LI G       EE+ +LL  M  +K + PN 
Sbjct: 228 KLGKVKEARELAMSF-----TPSVPVYNALINGVCKEYTFEEAFQLLDEM-MNKGIDPNV 281

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            +Y  ++ A     ++E +  V+ KM A G  P+  T+ +L + +   G ++ A      
Sbjct: 282 ISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDR 341

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M    V PN      ++ G C + ++ DA+    +M+     PN+  +++LI G+    D
Sbjct: 342 MIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGD 401

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            DG  +    M   G  P+VV ++ ++D      +  +   + ++M      P+   F+ 
Sbjct: 402 LDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNT 461

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
             KG   +G    A  +   M   G  PN   +  ++       +   A  + + M   G
Sbjct: 462 FIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRG 521

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           I  NL TY T+++GY  A     A ELL  M  +G +P   T+ +V D++
Sbjct: 522 IELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAY 571



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 125/241 (51%), Gaps = 1/241 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A  ++N +I  G  P ++ YT +V  L R   F     LI  ++ +   P+++ F
Sbjct: 400 GDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTF 459

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N  I     SG VD A+K+F +M +SGC P T+TYN L+       +  E+  L++ M +
Sbjct: 460 NTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDM-E 518

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + ++ N  TYN ++  +C    + EA  ++ KMV  G +PDA+T N +  AY + G+  
Sbjct: 519 HRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVN 578

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A Q++  +   +  P+      ++SG C    +E+A+ +L RM    + PN+  +N L+
Sbjct: 579 IAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638

Query: 248 K 248
           +
Sbjct: 639 R 639



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/336 (22%), Positives = 152/336 (45%), Gaps = 7/336 (2%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +   G  P L T+T+L+     +      L    ++ ++G+ P+ + +NA+++      +
Sbjct: 307 MFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRS 366

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           + +A+ +F +M+ +GC P   TY+ LI GY   G  + + ++   M       PN   Y 
Sbjct: 367 LGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMIT-HGCHPNVVAYT 425

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            +V   C  +   +A+ ++  M      P+ VT+NT  +     G    A ++  +M N+
Sbjct: 426 CMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNS 485

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              PN  T   ++    K+    +A   +  M+   +  NLV +N++I G+     +  +
Sbjct: 486 GCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYC---CAGML 542

Query: 260 DKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
            +AL L+ +    G KPD +T + ++DA+   G +    ++ D +      PDI  ++ L
Sbjct: 543 GEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSL 602

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
             G       ++A   L  M   G+ PNV  +  ++
Sbjct: 603 ISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 66/296 (22%), Positives = 137/296 (46%), Gaps = 5/296 (1%)

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +L+  + ++  K+ K    TY +++    S+  ++    ++ +M   GI      + ++ 
Sbjct: 59  ALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVI 118

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
            +Y + G + +A +  + MQ+ +V+P  +    I+     E   +        MK+  + 
Sbjct: 119 GSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGME 178

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           PN+  +N L+K        DG  K L  M   G  PD V+++T++ +    G + + +E+
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL 238

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
                     P + V++ L  G  +    ++A  +L  M   G+ PNV+ +TT+I+   +
Sbjct: 239 -----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSD 293

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           A  ++ ++++  KM   G +PNL T+ +L+ G+        A +    M  +GV P
Sbjct: 294 AGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVP 349



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 1/175 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G G+   A  +F+ +   G  P   TY  L+ +L + +RF     L+  +E  G++ +
Sbjct: 466 LCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELN 525

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +I     +G + EA+++  KM   G KP   T N +I  Y   GK   +++L+ 
Sbjct: 526 LVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMD 585

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
            +S  K   P+   Y  L+   C+   +EEA   + +M++ GI P+  T+N L R
Sbjct: 586 RLSAGK-WHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVR 639



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 72/165 (43%)

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           +T+  +++  +S   M   Q +   M   GI     +F  +   Y RAG  ++A      
Sbjct: 77  LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYR 136

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M+ + V P V ++  ++    +  + Q    IY  M + G+ PN+ TY  LL    +  +
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
              A +LL  M  KG  P + +   +  S   +G  +EA+ +  S
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMS 241


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 204/428 (47%), Gaps = 11/428 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L G G+  +A  +F+   E    P ++TY  L+         ++ + L+  +   G+
Sbjct: 269 LKVLCGAGRVEDARQLFD---EMASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGV 325

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P++ ++ +++    + G V +A+ + + M         + Y T++ G+ N G    + +
Sbjct: 326 EPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARR 385

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M Q K +  +  TY  L+   C    ++EA  V+ +M+A  +  D VTY  L   Y
Sbjct: 386 WFDEM-QRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGY 444

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A Q+   M    V PN  T   +  G CK+G+++ A   L+ M    +  N 
Sbjct: 445 CKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNA 504

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +NSLI G       D   + +  M+  G+KPDV T++T++DA   +G + +  ++  +
Sbjct: 505 CTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQE 564

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  GI+P I  +++L  G+  +G  +  + +L  M +  +HPN   + +++  +C    
Sbjct: 565 MLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNN 624

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+    IY+ MC   + PN  TY  L+ G+ +A+    A+     M EKG R       L
Sbjct: 625 MKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFR-------L 677

Query: 421 VADSWRAI 428
            A S+ A+
Sbjct: 678 TASSYSAL 685



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 186/395 (47%), Gaps = 1/395 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           + + ++  G  P    YT++VA L  + R    L+++  +    +  D  ++  +++   
Sbjct: 316 LLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFC 375

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
             G++  A + F +M+  G      TY TLI G    G+ +E+ K+LQ M   + +  ++
Sbjct: 376 NKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLA-RRLDVDE 434

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY +LV  +C +  + EA+ V   MV  G+ P+ VTY  L+    + G+   A ++L E
Sbjct: 435 VTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHE 494

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M N  +  N  T   +++G CK G ++ AMR +  M    + P++  + +LI       +
Sbjct: 495 MSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGE 554

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D     L  M + G+KP +VT++ +M+ +  +G +   +++ + M++  I P+   ++ 
Sbjct: 555 LDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNS 614

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L K Y      +    I   M    V PN   +  +I G C A  M+ A   + +M E G
Sbjct: 615 LMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKG 674

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
                 +Y  L+    + K+   A +L   M ++G
Sbjct: 675 FRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEG 709



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 195/389 (50%), Gaps = 12/389 (3%)

Query: 51  LISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG 110
           L+ +V + G+ P     NA+++       +DEA+++FQ + D        +YN L+K   
Sbjct: 222 LLRRVRQYGISPSPEACNAVLSRLP----LDEAIELFQGLPDK----NVCSYNILLKVLC 273

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
             G+ E++ +L   M+      P+  TY IL+  +C+   +E A  ++  MVA G++P+A
Sbjct: 274 GAGRVEDARQLFDEMAS----PPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNA 329

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
             Y ++       G    A  ++ +M +++V  +E     ++SG+C +G++  A R+   
Sbjct: 330 TVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDE 389

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
           M+   +  + V + +LI G     +    +K L  M    +  D VT++ ++D +   G 
Sbjct: 390 MQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGK 449

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           M +  ++ + MV+ G+ P++  ++ L+ G  + G+ Q A  +L  M   G+  N   + +
Sbjct: 450 MAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNS 509

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I+G C A  + +AM     M   G+ P++ TY TL+    ++ +  RA +LLQ M + G
Sbjct: 510 LINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNG 569

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           ++P   T  ++ + +   G     K++L+
Sbjct: 570 IKPTIVTYNVLMNGFCMSGRVEGGKKLLE 598



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/383 (23%), Positives = 172/383 (44%), Gaps = 5/383 (1%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGHRPTL--ITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +L  KG+  +A  +   ++   H+  L    YTT+++    +    S      ++++ G+
Sbjct: 338 LLCDKGRVSDALTVVEDMVH--HKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGL 395

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D + +  +IN    +G + EA K+ Q+M          TY  L+ GY   GK  E+ +
Sbjct: 396 ATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQ 455

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M Q + V PN  TY  L    C +  ++ A  ++++M   G++ +A TYN+L    
Sbjct: 456 VHNTMVQ-RGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGL 514

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G   +A + + +M    ++P+  T   ++   CK G ++ A   L  M +  + P +
Sbjct: 515 CKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTI 574

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N L+ GF      +G  K L  M E  + P+  T++++M  +     M    EI+  
Sbjct: 575 VTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKG 634

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M    +EP+ + ++IL KG+ +A   ++A+     M + G       ++ +I       K
Sbjct: 635 MCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKK 694

Query: 361 MQRAMSIYEKMCEIGINPNLKTY 383
              A  ++  M + G       Y
Sbjct: 695 FVEARKLFHDMRKEGFTAEPDVY 717



 Score = 39.7 bits (91), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 20/79 (25%), Positives = 40/79 (50%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA Y  N +IE+G R T  +Y+ L+  L ++K+F     L   + K+G   +  ++N  I
Sbjct: 662 EAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYI 721

Query: 72  NACSESGNVDEAMKIFQKM 90
           +      N++  + +  ++
Sbjct: 722 DFNFNEDNLEATLALCDEL 740


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 219/423 (51%), Gaps = 5/423 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  EA  + N ++ +G    ++TY T+V  + +    KS L+L+SK+E+  +
Sbjct: 228 INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI 287

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD ++++A+I+   + G+  +A  +F +M + G  P   TYN +I G+ + G+  ++ +
Sbjct: 288 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 347

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M + + + P+  T+N L+ A   +  + EA  +  +M+   I PD VTYN++   +
Sbjct: 348 LLRDMIE-REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 406

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            ++     A+ M   M +    P+  T   I+  YC+   +++ M+ L  +    +  N 
Sbjct: 407 CKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 462

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +N+LI GF ++ + +        M   GV PD +T + ++  +     + +  E+F+ 
Sbjct: 463 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 522

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +  + I+ D   ++I+  G  +  +  +A  +  S+  +GV P+V  +  +ISG+C    
Sbjct: 523 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 582

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ KM + G  P+  TY TL+ G  +A +  ++ EL+  M   G      TI++
Sbjct: 583 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 642

Query: 421 VAD 423
           VAD
Sbjct: 643 VAD 645



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 185/407 (45%), Gaps = 15/407 (3%)

Query: 26  RP--TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           RP  T +    ++    R  R    +SL  K+E   +  +   FN +I    +   +  +
Sbjct: 101 RPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFS 160

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ-----DKNVK----PN 134
           +  F K+   G +P   T+NTL+ G     +  E+L L   M +     D+ V+    P 
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPV 220

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
             T+N L+   C +  + EA  +V KMV  G+  D VTY T+     + G+T  A  +L 
Sbjct: 221 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 280

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           +M+   ++P+      I+   CK+G+  DA      M E  + PN+  +N +I GF    
Sbjct: 281 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 340

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
                 + L  M E  + PDV+TF+ ++ A    G + + +++ D+M+   I PD   ++
Sbjct: 341 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 400

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            +  G+ +      A+ +   M      P+VV F T+I  +C A ++   M +  ++   
Sbjct: 401 SMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 456

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           G+  N  TY TL+ G+ E      A++L Q M   GV P   T  ++
Sbjct: 457 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 503



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 139/301 (46%), Gaps = 16/301 (5%)

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
           S+++A +    MV S     AV  N +   + +      A  +  +M+  ++  N  +  
Sbjct: 86  SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---- 265
           I++  +C    +  ++    ++ +L   P++V FN+L+ G       D + +AL L    
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCL---EDRISEALALFGYM 202

Query: 266 ---------MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
                    M E G+ P V+TF+T+++     G + +   + + MV  G+  D+  +  +
Sbjct: 203 VETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 262

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G  + G+ + A ++L+ M +  + P+VV+++ +I   C       A  ++ +M E GI
Sbjct: 263 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 322

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            PN+ TY  ++ G+    +   A+ LL+ M E+ + P   T   +  +    G   EA++
Sbjct: 323 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 382

Query: 437 V 437
           +
Sbjct: 383 L 383



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 10/148 (6%)

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           I  +I+ F+IL K +    +   + S    + K G  P+VV F T++ G C   ++  A+
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196

Query: 366 ----------SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
                     S++++M EIG+ P + T+ TL+ G     +   A  L+  M  KG+    
Sbjct: 197 ALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 256

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEE 443
            T   + +    +G  + A  +L   EE
Sbjct: 257 VTYGTIVNGMCKMGDTKSALNLLSKMEE 284


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 204/413 (49%), Gaps = 1/413 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L  KG+  ++ +  + ++ +G +   ++Y  L+  L +    +  + L+  +E    
Sbjct: 87  MKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRST 146

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD ++++ +I+   +   VDEA  ++ +M   G  P   TY TLI G+   G+  E+  
Sbjct: 147 RPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFG 206

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M   KN+ PN  TYN L+   C +  ++E+ N++  M   G++PD V Y+ L   Y
Sbjct: 207 LLNEMIL-KNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGY 265

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              GE  +A+Q+   M    V P+  +  II++G CK   +++AM  L  M    + P+ 
Sbjct: 266 CLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDT 325

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V ++SLI G   +     +      M   G   ++VT+++++D       + K   +F  
Sbjct: 326 VTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMK 385

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M + GI+P+ + ++ L  G  + G  +K +++   +   G   +V  +T +ISG C    
Sbjct: 386 MKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGM 445

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
              A+++  KM + G  PN  T+E ++    E  +  +AE+LL  M  KG+ P
Sbjct: 446 FDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 211/442 (47%), Gaps = 3/442 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  P L+T + L+       +     S++ K+ K G +P++I+ N ++      G V +
Sbjct: 39  KGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKK 98

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           ++    K+   G +    +Y  L+ G   +G+   ++KLL+ + +D++ +P+   Y+ ++
Sbjct: 99  SLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTI-EDRSTRPDVVMYSTII 157

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
              C    ++EA+++  +M A GI PD +TY TL   +   G+   A  +L EM    + 
Sbjct: 158 DGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNIN 217

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           PN  T   ++   CKEG ++++   L  M +  V P++V+++ L+ G+  + +     + 
Sbjct: 218 PNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQI 277

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
             +M + GV PDV +++ I++       + +   +  +M+   + PD   +S L  G  +
Sbjct: 278 FLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCK 337

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G       +   M   G   N+V + +++ G C    + +A++++ KM E GI PN  T
Sbjct: 338 LGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYT 397

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           Y  L+ G  +  +  + + L Q +  KG      T  ++       G+  EA   +KS  
Sbjct: 398 YTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEA-LAMKSKM 456

Query: 443 EDRQSMPNKKD-EIAVESIHRK 463
           ED   +PN    EI + S+  K
Sbjct: 457 EDNGCIPNAVTFEIIIRSLLEK 478



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 135/281 (48%), Gaps = 7/281 (2%)

Query: 160 KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEG 219
           +M A GI PD VT + L   +   G+   +  +L ++     +PN      ++ G C +G
Sbjct: 35  QMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKG 94

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
            ++ ++ F  ++       + V +  L+ G   I ++    K L  +E+   +PDVV +S
Sbjct: 95  EVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYS 154

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
           TI+D      L+ +  +++ +M   GI PD+  ++ L  G+  AG+  +A  +L  M   
Sbjct: 155 TIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILK 214

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
            ++PN+  + T+I   C   K++ + ++   M + G+ P++  Y  L+ GY    +  +A
Sbjct: 215 NINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKA 274

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSW-------RAIGLARE 433
           +++  VM + GV P   +  ++ +          A+ L RE
Sbjct: 275 KQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLRE 315


>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 913

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/430 (24%), Positives = 216/430 (50%), Gaps = 36/430 (8%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           I Y+ ++ A  +         L+ ++E+DG+      +++M++  +   +  + + +F++
Sbjct: 383 IIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFER 442

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           +K+    P+  +Y  LI  Y  +GK  +++ + + M +   +K N++TY++L+  +   +
Sbjct: 443 LKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEM-ESSGIKHNNKTYSMLISGFIHLH 501

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
               A+ +  +M+ SG+QPD   YN L  A+ + G   RA ++L +MQ  +++P+ R   
Sbjct: 502 DFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFR 561

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            I+ G+   G+M+ A+  L  M+     P ++ +N+LI G +     +     L  M   
Sbjct: 562 PIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIA 621

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH------------------ 311
           G+ P+  T++ IM  +++ G + K  E F  + + G++ D++                  
Sbjct: 622 GITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSA 681

Query: 312 -----------------VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
                            V++IL  G+ R G+  +A  ++  M++ GV PN+  +T+ I+ 
Sbjct: 682 LAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINA 741

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C A  MQRA ++ ++M ++G+ PNLKTY TL+ G+  A  P RA +  + M+  G++P 
Sbjct: 742 CCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPD 801

Query: 415 KSTIQLVADS 424
           ++    +  S
Sbjct: 802 EAAYHCLVTS 811



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 177/353 (50%), Gaps = 1/353 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+ V  GK  +A  I   +   G +    TY+ L++       F +   +  ++ K G+
Sbjct: 459 INLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGL 518

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD  ++N +I A  + GN+D A++I +KM+    +P+   +  +I+G+   G  + +L 
Sbjct: 519 QPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALD 578

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L LM +     P   TYN L+     KN +E A +V+ KM  +GI P+  TY  + R Y
Sbjct: 579 ILDLMRR-SGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGY 637

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A  G+  +A +   +++   ++ +      ++   CK G M+ A+     M   ++  N 
Sbjct: 638 AATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNT 697

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            V+N LI G+    D       +  M+E GV P++ T+++ ++A   AG M + Q + D+
Sbjct: 698 FVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDE 757

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
           M   G++P++  ++ L KG+ RA  P +A      M+  G+ P+   +  +++
Sbjct: 758 MSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAYHCLVT 810



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/446 (21%), Positives = 196/446 (43%), Gaps = 36/446 (8%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  H A   F  +   G  P    +T+LV A    +  +  LS   +++ +G++   + 
Sbjct: 290 RGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVT 349

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +I+   +  +   A  +F++ K +        Y+ +I  +   G  + + +L+  M 
Sbjct: 350 YSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEME 409

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +D    P D  Y+ ++  +      ++   V  ++      P  ++Y  L   Y + G+ 
Sbjct: 410 EDGIDAPID-AYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKV 468

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSG-------------------------------- 214
            +A  +  EM+++ ++ N +T  +++SG                                
Sbjct: 469 AKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLL 528

Query: 215 ---YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
              +CK GNM+ A+R L +M++  + P+   F  +I+GF    D       L LM   G 
Sbjct: 529 IEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGC 588

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            P V+T++ ++        + +   + + M  AGI P+ H ++I+ +GY   G+  KA  
Sbjct: 589 APTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFE 648

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
             T +++ G+  +V ++ T++   C + +MQ A+++  +M    I  N   Y  L+ G+ 
Sbjct: 649 YFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWA 708

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKST 417
                W A +L++ M+E GV P   T
Sbjct: 709 RRGDVWEAADLMKQMKEDGVPPNIHT 734



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 158/344 (45%), Gaps = 46/344 (13%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  IF  +++ G +P    Y  L+ A  +       + ++ K++K+ M+P +  F  +I 
Sbjct: 506 AFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIE 565

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
             + +G++  A+ I   M+ SGC PT  TYN LI G     + E ++ +L  MS    + 
Sbjct: 566 GFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSI-AGIT 624

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA------------- 179
           PN+ TY I++R + +   I +A+    K+   G++ D   Y TL RA             
Sbjct: 625 PNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAV 684

Query: 180 ----------------------YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
                                 +A+ G+ + A  ++ +M+ + V PN  T    ++  CK
Sbjct: 685 TREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCK 744

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD--- 274
            G+M+ A   +  M ++ + PNL  + +LIKG+      D   K    M+  G+KPD   
Sbjct: 745 AGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAA 804

Query: 275 -------VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                  +++ +T+M+  +  G++  C+E+F++ +   +   +H
Sbjct: 805 YHCLVTSLLSRATVMEGSTYTGILSVCREMFENDLTVDMRTAVH 848



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 161/369 (43%), Gaps = 36/369 (9%)

Query: 96  KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
           KP+   +  +I  Y   G    +    + M + + ++PN   +  LV A+     +  A 
Sbjct: 274 KPSRREFGLMIVYYAKRGDKHHARATFENM-RARGIEPNAFVFTSLVHAYAVARDMRGAL 332

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
           +   +M A GI+   VTY+ L   + +  +T  A+ +  E + N    N      I+  +
Sbjct: 333 SCTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAH 392

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD------------------ 257
           C+ GNM+ A   ++ M+E  +   +  ++S++ G+  I+D                    
Sbjct: 393 CQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSI 452

Query: 258 --------------GVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
                          V KA+ +   ME  G+K +  T+S ++  +           IF++
Sbjct: 453 ISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEE 512

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+K+G++PD  ++++L + + + G   +A  IL  M+K  + P+   F  +I G+  A  
Sbjct: 513 MLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGD 572

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+RA+ I + M   G  P + TY  L+ G     Q  RA  +L  M   G+ P + T  +
Sbjct: 573 MKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTI 632

Query: 421 VADSWRAIG 429
           +   + A G
Sbjct: 633 IMRGYAATG 641



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/299 (21%), Positives = 132/299 (44%)

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           E W  V        +P    +  +   YA+ G+ + A      M+   + PN      +V
Sbjct: 260 EDWQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLV 319

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
             Y    +M  A+     MK   +   +V ++ LI GF  I D+   D      +     
Sbjct: 320 HAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGD 379

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            + + +S I+ A   +G M + +E+  +M + GI+  I  +  +  GY    + +K   +
Sbjct: 380 LNGIIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIV 439

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              +++    P+++ +  +I+ +    K+ +A++I ++M   GI  N KTY  L+ G+  
Sbjct: 440 FERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIH 499

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
                 A  + + M + G++P ++   L+ +++  +G    A R+L+  +++R    N+
Sbjct: 500 LHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNR 558


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 214/433 (49%), Gaps = 8/433 (1%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  PT+ TY  L+    +   F+++  L++++   G+  +  +FN +I+A  + G V +
Sbjct: 265 KGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTK 324

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A +  ++M + GC P  +TYNT+I      G+ +E+ + L+  ++++ + PN  +Y  L+
Sbjct: 325 AAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLE-KAKERGLLPNKFSYTPLM 383

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
            A+C +    +A  +++++   G +PD V+Y         +GE   A  +  +M    V 
Sbjct: 384 HAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVF 443

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+ +   +++SG CK G        L  M +  V P++ VF +L+ GF+   + D   K 
Sbjct: 444 PDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKI 503

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
             ++   GV P +V ++ ++  +   G M       + M      PD + +S +  GYV+
Sbjct: 504 FKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVK 563

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
             +   A  +   M K+   PNV+ +T++I+G+C    M RA  ++  M    + PN+ T
Sbjct: 564 QHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVT 623

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           Y TL+ G+ +A +P +A  + ++M   G  P  +T   + +     GL   A   +   E
Sbjct: 624 YTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLIN-----GLTNTATSPVLIEE 678

Query: 443 EDRQSMPNKKDEI 455
           +D  SM N++  I
Sbjct: 679 KD--SMENERSLI 689



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 196/414 (47%), Gaps = 4/414 (0%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           + +++L+  L   + F  I  ++  ++   +KP    F+A+I A  ESG++D A+++F  
Sbjct: 92  VAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDRALQLFHT 151

Query: 90  MKD-SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN---VKPNDRTYNILVRAW 145
           +++   C PT    N+L+ G    GK + +L+L   M Q  +      ++ T +I+V+  
Sbjct: 152 VREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGL 211

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C+   IEE   +V      G  P  V YN +   Y + G+   A + L E++   V P  
Sbjct: 212 CNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTV 271

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T G +++G+CK G  E   + L  M    ++ N+ VFN++I             + +  
Sbjct: 272 ETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRR 331

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M E G  PD+ T++T+++     G + +  E  +   + G+ P+   ++ L   Y + G+
Sbjct: 332 MAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGD 391

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             KA  +L  + + G  P++V +   I G     ++  A+ + EKM E G+ P+ + Y  
Sbjct: 392 YVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNV 451

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           L+ G  +  +    + LL  M ++ V+P       + D +   G   EA ++ K
Sbjct: 452 LMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFK 505



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 116/459 (25%), Positives = 204/459 (44%), Gaps = 28/459 (6%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA        E G  P   +YT L+ A  +Q  +     ++ ++ + G KPD + +
Sbjct: 355 GRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSY 414

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            A I+     G +D A+ + +KM + G  P    YN L+ G    G+   ++KLL     
Sbjct: 415 GAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGR-FPAMKLLLSEML 473

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D+NV+P+   +  L+  +     ++EA  +   ++  G+ P  V YN + + + ++G+  
Sbjct: 474 DRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMT 533

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A   L +M+N    P+E T   ++ GY K+ +M  A++   +M + +  PN++ + SLI
Sbjct: 534 DALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLI 593

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            GF    D    +K    M+ F + P+VVT++T++  +  AG   K   IF+ M+  G  
Sbjct: 594 NGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCP 653

Query: 308 PDIHVFSILAKGYVR-AGEPQKAE-------------SILTSMRKYGVHPNVVMFTTVIS 353
           P+   F  L  G    A  P   E                T M   G    +  + +VI 
Sbjct: 654 PNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIV 713

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY---GEAKQPWR---AEELLQVME 407
             C    +  A  +  KM   G   +   +  +L G    G++K+ WR   + +L ++  
Sbjct: 714 CLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKE-WRNIISCDLNKIEL 772

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA-EEDR 445
           +  V+       L  D +   G   EA  +L++  EEDR
Sbjct: 773 QTAVK-----YSLTLDKYLYQGRLSEASVILQTLIEEDR 806



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/334 (19%), Positives = 128/334 (38%), Gaps = 57/334 (17%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+  +  G+  EA  IF  +I +G  P ++ Y  ++    +  +    LS ++K++    
Sbjct: 488 MDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHH 547

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   ++ +I+   +  ++  A+K+F +M     KP   TY +LI G+           
Sbjct: 548 APDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGF----------- 596

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
                                    C K  +  A  V   M +  + P+ VTY TL   +
Sbjct: 597 -------------------------CKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGF 631

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+  +A  +   M  N   PN+ T   +++G     N   +   +     +E     
Sbjct: 632 FKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLT---NTATSPVLIEEKDSMENE--- 685

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
               SLI  F  +  S+G D+             +  +++++      G++   Q +   
Sbjct: 686 ---RSLILDFFTMMLSEGWDQV------------IAAYNSVIVCLCKHGMVDTAQLLLTK 730

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           M+  G   D   F+ +  G    G+ ++  +I++
Sbjct: 731 MLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNIIS 764


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 219/423 (51%), Gaps = 5/423 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  EA  + N ++ +G    ++TY T+V  + +    KS L+L+SK+E+  +
Sbjct: 233 INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI 292

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD ++++A+I+   + G+  +A  +F +M + G  P   TYN +I G+ + G+  ++ +
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 352

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M + + + P+  T+N L+ A   +  + EA  +  +M+   I PD VTYN++   +
Sbjct: 353 LLRDMIE-REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            ++     A+ M   M +    P+  T   I+  YC+   +++ M+ L  +    +  N 
Sbjct: 412 CKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +N+LI GF ++ + +        M   GV PD +T + ++  +     + +  E+F+ 
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +  + I+ D   ++I+  G  +  +  +A  +  S+  +GV P+V  +  +ISG+C    
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ KM + G  P+  TY TL+ G  +A +  ++ EL+  M   G      TI++
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 647

Query: 421 VAD 423
           VAD
Sbjct: 648 VAD 650



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 185/412 (44%), Gaps = 20/412 (4%)

Query: 26  RP--TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           RP  T +    ++    R  R    +SL  K+E   +  +   FN +I    +   +  +
Sbjct: 101 RPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFS 160

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ----------DKNVK- 132
           +  F K+   G +P   T+NTL+ G     +  E+L L   M +          D+ V+ 
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI 220

Query: 133 ---PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
              P   T+N L+   C +  + EA  +V KMV  G+  D VTY T+     + G+T  A
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
             +L +M+   ++P+      I+   CK+G+  DA      M E  + PN+  +N +I G
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 340

Query: 250 FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
           F          + L  M E  + PDV+TF+ ++ A    G + + +++ D+M+   I PD
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 400

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
              ++ +  G+ +      A+ +   M      P+VV F T+I  +C A ++   M +  
Sbjct: 401 TVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLR 456

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           ++   G+  N  TY TL+ G+ E      A++L Q M   GV P   T  ++
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/306 (21%), Positives = 139/306 (45%), Gaps = 21/306 (6%)

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
           S+++A +    MV S     AV  N +   + +      A  +  +M+  ++  N  +  
Sbjct: 86  SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---- 265
           I++  +C    +  ++    ++ +L   P++V FN+L+ G       D + +AL L    
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCL---EDRISEALALFGYM 202

Query: 266 --------------MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                         M E G+ P V+TF+T+++     G + +   + + MV  G+  D+ 
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            +  +  G  + G+ + A ++L+ M +  + P+VV+++ +I   C       A  ++ +M
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
            E GI PN+ TY  ++ G+    +   A+ LL+ M E+ + P   T   +  +    G  
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382

Query: 432 REAKRV 437
            EA+++
Sbjct: 383 FEAEKL 388



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 15/153 (9%)

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           I  +I+ F+IL K +    +   + S    + K G  P+VV F T++ G C   ++  A+
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196

Query: 366 SIY---------------EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +++               ++M EIG+ P + T+ TL+ G     +   A  L+  M  KG
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           +     T   + +    +G  + A  +L   EE
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 207/427 (48%), Gaps = 2/427 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G RP ++TY  LV    +  R +   S  ++++++G+  + + F+  ++A  ++G V EA
Sbjct: 259 GCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREA 318

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           MK+F +M+  G KP   TY  L+ G    G+ +++L L   M Q + V  N  TY +LV 
Sbjct: 319 MKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQ-QGVPLNVVTYTVLVD 377

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C +  + EA +V   M  +GI+ + + Y TL   +  Y  + RA  +L EM++  +  
Sbjct: 378 GLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMEL 437

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +    G ++ G C    +++A   L +M E  + PN V++ +++      +        L
Sbjct: 438 DVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALL 497

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M + G +P++VT+  ++D    AG + +    F+ MV  G+EP++  ++ L  G  + 
Sbjct: 498 QKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKN 557

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G   KA  +L  M   G+  + V+ T+++ G      +Q A ++  KM   G+  +L  Y
Sbjct: 558 GRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGY 617

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
              +WG+        A E+L  M E G+ P       + +  + +G   EA  +L++  E
Sbjct: 618 TCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAA-ILQNEME 676

Query: 444 DRQSMPN 450
              S  N
Sbjct: 677 SLLSCTN 683



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/392 (24%), Positives = 195/392 (49%), Gaps = 1/392 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L E+   P + T+  ++  L ++       +L+++++  G  PD + +N++I+   + G 
Sbjct: 185 LFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGE 244

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           ++E  K+  +M+  GC+P   TYN L+  +   G+ E +      M ++  V  N  T++
Sbjct: 245 LEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKRE-GVMANVVTFS 303

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
             V A+C    + EA  +  +M   G++P+ VTY  L     + G    A  +  EM   
Sbjct: 304 TFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQ 363

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            V  N  T  ++V G CKEG + +A      M+   +  N +++ +LI G    K+S+  
Sbjct: 364 GVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERA 423

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
              L+ M++ G++ DV  +  ++    +   + + + + + M + G++P+  +++ +   
Sbjct: 424 LSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDA 483

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             +A +  +A ++L  M   G  PN+V +  ++ G C A  +  A+S + KM ++G+ PN
Sbjct: 484 CFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPN 543

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           ++ Y  L+ G  +  +  +A  LL  M +KG+
Sbjct: 544 VQAYTALVDGLCKNGRLDKAVLLLDEMIDKGM 575



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 198/409 (48%), Gaps = 28/409 (6%)

Query: 10  PHEAHYIFNCLIEEGHRPTLITYTTLV-----AALTRQKRFKSILSLISKVEKDGMKPDS 64
           PH +  + + L+  GH P L    +LV     AAL    R  ++ S++            
Sbjct: 87  PH-SRSLLSRLLAPGHHPHLAA--SLVDLLHRAALALGPRRSALPSVV------------ 131

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
              + +++  ++ G +D+A+    ++++    P T T N ++         E + +L + 
Sbjct: 132 ---DTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQ 188

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           +       PN  T+NI++   C +  + EA  ++ +M A G  PD VTYN+L   Y + G
Sbjct: 189 LP-----APNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCG 243

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           E    E+++ EM+    RP+  T   +V+ +CK G ME A  +   MK   V  N+V F+
Sbjct: 244 ELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFS 303

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           + +  F          K    M   G+KP+ VT++ ++D    AG +     + ++MV+ 
Sbjct: 304 TFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQ 363

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+  ++  +++L  G  + G+  +AE +   M + G+  N +++TT+I G       +RA
Sbjct: 364 GVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERA 423

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           +S+  +M + G+  ++  Y  L+WG    ++   A+ LL  M+E G++P
Sbjct: 424 LSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKP 472



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/388 (23%), Positives = 178/388 (45%), Gaps = 3/388 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N     G+   A+  F  +  EG    ++T++T V A  +    +  + L +++   GM
Sbjct: 271 VNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGM 330

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP+ + +  +++   ++G +D+A+ +  +M   G      TY  L+ G    GK  E+  
Sbjct: 331 KPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAED 390

Query: 121 LLQLMSQDKNVKPNDRTYNILVRA-WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           + +LM +   ++ N+  Y  L+   +  KNS E A +++ +M   G++ D   Y  L   
Sbjct: 391 VFRLMER-AGIRANELLYTTLIHGHFVYKNS-ERALSLLSEMKDKGMELDVSLYGALIWG 448

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
                +   A+ +L +M    ++PN      I+    K     +A+  L +M +    PN
Sbjct: 449 LCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPN 508

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +V + +L+ G       D        M + G++P+V  ++ ++D     G + K   + D
Sbjct: 509 IVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLD 568

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M+  G+  D  V + L  G+++ G  Q A ++   M   G+  ++  +T  + G+CN  
Sbjct: 569 EMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLN 628

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLL 387
            +Q A  +  +M E GI P+   Y  L+
Sbjct: 629 MIQEAREVLSEMIENGITPDAVVYNCLI 656



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 161/346 (46%), Gaps = 9/346 (2%)

Query: 100 STYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVY 159
           S  +TL+    + G  ++++  L  + ++  V PN RT N ++     + S E AW +  
Sbjct: 129 SVVDTLLSLLADRGLLDDAVLALARV-RELRVPPNTRTCNHILLCLARERSSELAWRLFE 187

Query: 160 KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEG 219
           ++ A    P+  T+N +     + G+   A  +L  M+     P+  T   ++ GY K G
Sbjct: 188 QLPA----PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCG 243

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
            +E+  + +  M+     P++V +N+L+  F      +        M+  GV  +VVTFS
Sbjct: 244 ELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFS 303

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
           T +DA+   G++ +  ++F  M   G++P+   ++ L  G  +AG    A  +   M + 
Sbjct: 304 TFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQ 363

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
           GV  NVV +T ++ G C   K+  A  ++  M   GI  N   Y TL+ G+   K   RA
Sbjct: 364 GVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERA 423

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR--EAKRVLKSAEE 443
             LL  M++KG+    S     A  W    L +  EAK +L   +E
Sbjct: 424 LSLLSEMKDKGMELDVSLYG--ALIWGLCNLQKLDEAKSLLNKMDE 467



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 1/288 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA  +F  +   G R   + YTTL+      K  +  LSL+S+++  GM+ D
Sbjct: 379 LCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELD 438

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             L+ A+I        +DEA  +  KM + G KP    Y  ++       K  E++ LLQ
Sbjct: 439 VSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQ 498

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D   +PN  TY  LV   C   SI+EA +   KMV  G++P+   Y  L     + 
Sbjct: 499 KM-MDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKN 557

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G   +A  +L EM +  +  +   C  ++ G+ K+GN++DA     +M    +  +L  +
Sbjct: 558 GRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGY 617

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
              + GF ++       + L+ M E G+ PD V ++ +++     G M
Sbjct: 618 TCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNM 665



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 112/226 (49%), Gaps = 1/226 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  + N + E G +P  + YT ++ A  + ++    ++L+ K+   G +P+ + + 
Sbjct: 454 KLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYC 513

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           A+++   ++G++DEA+  F KM D G +P    Y  L+ G    G+ ++++ LL  M  D
Sbjct: 514 ALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMI-D 572

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K +  ++     L+     + ++++A+ +  KM+ SG+Q D   Y      +        
Sbjct: 573 KGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQE 632

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           A ++L EM  N + P+      +++   K GNME+A      M+ L
Sbjct: 633 AREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEMESL 678



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/85 (24%), Positives = 45/85 (52%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   +A  +   +I  G +  L  YT  V         +    ++S++ ++G+ PD+++
Sbjct: 592 QGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVV 651

Query: 67  FNAMINACSESGNVDEAMKIFQKMK 91
           +N +IN C + GN++EA  +  +M+
Sbjct: 652 YNCLINKCQKLGNMEEAAILQNEME 676


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 219/423 (51%), Gaps = 5/423 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  EA  + N ++ +G    ++TY T+V  + +    KS L+L+SK+E+  +
Sbjct: 17  INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI 76

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD ++++A+I+   + G+  +A  +F +M + G  P   TYN +I G+ + G+  ++ +
Sbjct: 77  KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 136

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M + + + P+  T+N L+ A   +  + EA  +  +M+   I PD VTYN++   +
Sbjct: 137 LLRDMIE-REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 195

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            ++     A+ M   M +    P+  T   I+  YC+   +++ M+ L  +    +  N 
Sbjct: 196 CKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 251

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +N+LI GF ++ + +        M   GV PD +T + ++  +     + +  E+F+ 
Sbjct: 252 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 311

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +  + I+ D   ++I+  G  +  +  +A  +  S+  +GV P+V  +  +ISG+C    
Sbjct: 312 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 371

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ KM + G  P+  TY TL+ G  +A +  ++ EL+  M   G      TI++
Sbjct: 372 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 431

Query: 421 VAD 423
           VAD
Sbjct: 432 VAD 434



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 4/285 (1%)

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           T+N L+   C +  + EA  +V KMV  G+  D VTY T+     + G+T  A  +L +M
Sbjct: 12  TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 71

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
           +   ++P+      I+   CK+G+  DA      M E  + PN+  +N +I GF      
Sbjct: 72  EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 131

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
               + L  M E  + PDV+TF+ ++ A    G + + +++ D+M+   I PD   ++ +
Sbjct: 132 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 191

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G+ +      A+ +   M      P+VV F T+I  +C A ++   M +  ++   G+
Sbjct: 192 IYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 247

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             N  TY TL+ G+ E      A++L Q M   GV P   T  ++
Sbjct: 248 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 292



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 87/172 (50%)

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M E G+ P V+TF+T+++     G + +   + + MV  G+  D+  +  +  G  + G+
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            + A ++L+ M +  + P+VV+++ +I   C       A  ++ +M E GI PN+ TY  
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           ++ G+    +   A+ LL+ M E+ + P   T   +  +    G   EA+++
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 172


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 213/415 (51%), Gaps = 1/415 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  +A+++F+ +I +G  P ++TY++L+  L + +      +++  +   G+ P++  
Sbjct: 216 EGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRT 275

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N MI      G ++EA+++ +KM  SG +P   TY  LI+ Y  +G+  E+  +   M 
Sbjct: 276 YNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMV 335

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + K  KPN   Y+IL+  + +K ++ +  +++  M+  GI  +   +N L  AYA++G  
Sbjct: 336 R-KGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAV 394

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A     EM+ N +RP+  +   ++   CK G +EDA+    +M    + PN++ F SL
Sbjct: 395 DKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSL 454

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G   I +   V++    M   G+ PD +  +TIMD     G + + Q+ FD ++  G+
Sbjct: 455 IHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGV 514

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           +P++  ++ L  GY   G+  ++      M   G+ P+   +  +++G+    +++ A++
Sbjct: 515 KPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALA 574

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           +Y +M    +     T   +L G  +A +   A EL   M ++G + +  T   V
Sbjct: 575 LYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTV 629



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 197/396 (49%), Gaps = 7/396 (1%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           +NC       P +++Y+T++    ++        L  ++   G  PD + ++++I+   +
Sbjct: 197 YNC------SPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCK 250

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
           +  +++A  I Q M D G  P T TYN +I+GY ++G+ EE+++LL+ MS    ++P+  
Sbjct: 251 AQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMS-GSGLQPDVV 309

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           TY +L++ +C      EA +V   MV  G +P++  Y+ L   YA  G       +L  M
Sbjct: 310 TYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM 369

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
             + +    R   I++  Y K G ++ AM     M++  + P++V ++++I     I   
Sbjct: 370 IRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRV 429

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           +        M   G+ P++++F++++    S G   K +E+  +M+  GI PD    + +
Sbjct: 430 EDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTI 489

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
                + G   +A+     +   GV PNVV + T+I G+C   KM  ++  +++M  IG+
Sbjct: 490 MDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGL 549

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
            P+  TY  LL GY +  +   A  L + M  K V+
Sbjct: 550 RPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVK 585



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 194/382 (50%), Gaps = 3/382 (0%)

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMK-IFQKMKDSGCKPTTSTYNTLIKGYGNVGKP 115
           K G +  ++  N +I    +    D+AM  +F++M + G  P   +YN LIKG     K 
Sbjct: 122 KMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKS 181

Query: 116 EESLKLLQLMSQDK--NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY 173
           +E+L+LL  M+ D   N  PN  +Y+ ++  +  +  +++A+ +  +M+  G  PD VTY
Sbjct: 182 QEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTY 241

Query: 174 NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
           ++L     +     +AE +L  M +  V PN RT  I++ GYC  G +E+A+R L +M  
Sbjct: 242 SSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSG 301

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
             + P++V +  LI+ +  I            M   G KP+   +  ++  +++ G +  
Sbjct: 302 SGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALID 361

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
            +++ D M++ GI  +   F+IL   Y + G   KA +  T MR+ G+ P+VV ++TVI 
Sbjct: 362 VRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIH 421

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             C   +++ A+  + +M   G++PN+ ++ +L+ G     +  + EEL   M  +G+ P
Sbjct: 422 ILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHP 481

Query: 414 KKSTIQLVADSWRAIGLAREAK 435
               +  + D+    G   EA+
Sbjct: 482 DAIFMNTIMDNLCKEGRVVEAQ 503



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 164/336 (48%), Gaps = 1/336 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++IL   G+  +A Y FN ++ EG  P +I++T+L+  L     +K +  L  ++   G+
Sbjct: 420 IHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGI 479

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD+I  N +++   + G V EA   F  +   G KP   +YNTLI GY  VGK +ES+K
Sbjct: 480 HPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIK 539

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M     ++P+  TYN L+  +     +E+A  +  +M    ++  A+T N +    
Sbjct: 540 QFDRMVS-IGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGL 598

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G    A ++  +M +   +    T   ++ G C+   +++A+R    ++  E   ++
Sbjct: 599 FQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDV 658

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FN +I   L +   D      + M   G  P V+T+S ++ +    GL+ +  ++F  
Sbjct: 659 WTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLS 718

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           M K G   D H+ +++ +  +  G+ ++A + LT +
Sbjct: 719 MEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKI 754



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 161/342 (47%), Gaps = 14/342 (4%)

Query: 110 GNVGKPEESLKLL-QLMSQDK--NVKPNDRTYNILVRAWCS---KNSIEEAWNVVYKMVA 163
           G++G+ E++L L  +L+ Q +  +V   +    ++ RA  S   ++S   A ++   M  
Sbjct: 26  GSLGR-EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMAR 84

Query: 164 SGIQPDAVT---YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           SG+   A        L R +   G    A            R    T   ++ G C    
Sbjct: 85  SGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKR 144

Query: 221 MEDAMRFLYR-MKELEVHPNLVVFNSLIKGF-LDIKDSDGVDKALTLMEEFG--VKPDVV 276
            +DAM  ++R M EL   P++  +N+LIKG  ++ K  + ++  L +  + G    P+VV
Sbjct: 145 TDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVV 204

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           ++STI+D +   G + K   +FD+M+  G  PD+  +S L  G  +A    KAE+IL  M
Sbjct: 205 SYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHM 264

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
              GV PN   +  +I G+C+  +++ A+ + +KM   G+ P++ TY  L+  Y +  + 
Sbjct: 265 FDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRC 324

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             A  +   M  KG +P  +   ++   +   G   + + +L
Sbjct: 325 AEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLL 366



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 4/246 (1%)

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD- 257
           N +  N    GI++  +C  G ++ A        ++      V  N LIKG  D K +D 
Sbjct: 88  NMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDD 147

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG---IEPDIHVFS 314
            +D     M E G  PDV +++ ++          +  E+   M   G     P++  +S
Sbjct: 148 AMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYS 207

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            +  G+ + GE  KA  +   M   G  P+VV ++++I G C A  M +A +I + M + 
Sbjct: 208 TIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDK 267

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G+ PN +TY  ++ GY    Q   A  LL+ M   G++P   T  L+   +  IG   EA
Sbjct: 268 GVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEA 327

Query: 435 KRVLKS 440
           + V  S
Sbjct: 328 RSVFDS 333



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/268 (20%), Positives = 120/268 (44%), Gaps = 36/268 (13%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L  +G+  EA   F+ +I  G +P +++Y TL+       +    +    ++   G+
Sbjct: 490 MDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGL 549

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQ-------------------------------- 88
           +PDS  +NA++N   ++G V++A+ +++                                
Sbjct: 550 RPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARE 609

Query: 89  ---KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
              KM D G +    TYNT++ G       +E+L++ + + + K  + +  T+NI++ A 
Sbjct: 610 LYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDL-RSKEFELDVWTFNIVINAL 668

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                I+EA ++   MV  G  P  +TY+ + ++  + G    ++ +   M+ N    + 
Sbjct: 669 LKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADS 728

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
               +I+    ++G++  A  +L ++ E
Sbjct: 729 HMLNVIIRRLLEKGDVRRAGTYLTKIDE 756



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 49/106 (46%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L+  G+  EA  +F+ ++  G  P +ITY+ ++ +   +   +    L   +EK+G 
Sbjct: 665 INALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGC 724

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLI 106
             DS + N +I    E G+V  A     K+ +       ST   LI
Sbjct: 725 AADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLI 770


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 225/489 (46%), Gaps = 71/489 (14%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
            F  ++  G  P++ TY  ++  L R+   ++  SL  +++  G++PD + +N++I+   
Sbjct: 238 FFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYG 297

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G +  A+ +F++MKD+GC+P   TYN+LI  +    +  ++ + L  M Q + ++PN 
Sbjct: 298 KVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQ-RGLQPNV 356

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY+ L+ A+C    + EA      M+  G+QP+  TY +L  A  + G+   A ++  E
Sbjct: 357 VTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESE 416

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGN----------------------------------- 220
           MQ   V  N  T   ++ G C++G                                    
Sbjct: 417 MQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKM 476

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFL---DIKDSDGV-----DKALTL------- 265
           ME AM  L  M +  + P+L+++ + I G     +I+DS  V     D  LT        
Sbjct: 477 MEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTT 536

Query: 266 --------------------MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
                               M++ G+K  VVT+  ++D     GL+ +    FD M + G
Sbjct: 537 LIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNG 596

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           ++P+I +++ L  G  +    ++A+++   M   G+ P+ +++T++I G         A+
Sbjct: 597 LQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEAL 656

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           S+  +M EIG+  +L  Y +L+WG+    Q   A+ LL  M  KG+ P +     +   +
Sbjct: 657 SLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKY 716

Query: 426 RAIGLAREA 434
             +G   EA
Sbjct: 717 YELGDINEA 725



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 202/411 (49%), Gaps = 1/411 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           RP    + TL   L      +       K+ K  + P     N +++  S+S     A+ 
Sbjct: 178 RPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALS 237

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
            F+ M  +G  P+  TYN +I      G  E +  L + M + K ++P+  TYN L+  +
Sbjct: 238 FFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEM-KAKGLRPDIVTYNSLIDGY 296

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                +  A +V  +M  +G +PD +TYN+L   + ++    +A + L  M+   ++PN 
Sbjct: 297 GKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNV 356

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   ++  +CK G + +A +F   M  + + PN   + SLI     I D +   K  + 
Sbjct: 357 VTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESE 416

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M++ GV  ++VT++ ++D     G M + +E+F  ++KAG   +  +++ L  GY++A  
Sbjct: 417 MQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKM 476

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            +KA  IL  M K  + P+++++ T I G C   +++ +M++  +M + G+  N   Y T
Sbjct: 477 MEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTT 536

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
           L+  Y +  +   A  LLQ M++ G++    T  ++ D    IGL ++A R
Sbjct: 537 LIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVR 587



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/450 (23%), Positives = 207/450 (46%), Gaps = 36/450 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            N+LV  G   EA   F  + +    P + +   L+  L++  +    LS    +   G+
Sbjct: 188 FNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGL 247

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P    +N +I   +  G+++ A  +F++MK  G +P   TYN+LI GYG VG    ++ 
Sbjct: 248 SPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVS 307

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M +D   +P+  TYN L+  +C    I +A+  ++ M   G+QP+ VTY+TL  A+
Sbjct: 308 VFEEM-KDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAF 366

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A +   +M    ++PNE T   ++   CK G++ +A +    M++  V+ N+
Sbjct: 367 CKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNI 426

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V + +L+ G  +       ++    + + G   +   ++++   +  A +M K  +I ++
Sbjct: 427 VTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEE 486

Query: 301 MVKAGIEPDI-----------------------------------HVFSILAKGYVRAGE 325
           M K  ++PD+                                   ++++ L   Y + G+
Sbjct: 487 MNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGK 546

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A ++L  M+  G+   VV +  +I G C    +Q+A+  ++ M   G+ PN+  Y  
Sbjct: 547 TTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTA 606

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           L+ G  +      A+ L   M +KG+ P K
Sbjct: 607 LIDGLCKNDCLEEAKNLFNEMLDKGISPDK 636



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 92/383 (24%), Positives = 186/383 (48%), Gaps = 1/383 (0%)

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P   +F+ + N   + G ++EA + F KM      P   + N L+       K   +L 
Sbjct: 178 RPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALS 237

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             + M     + P+  TYN+++     +  +E A ++  +M A G++PD VTYN+L   Y
Sbjct: 238 FFKDMVV-AGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGY 296

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A  +  EM++    P+  T   +++ +CK   +  A  +L+ MK+  + PN+
Sbjct: 297 GKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNV 356

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +++LI  F         +K    M   G++P+  T+++++DA    G + +  ++  +
Sbjct: 357 VTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESE 416

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M +AG+  +I  ++ L  G    G  ++AE +  ++ K G   N  ++T++  G+  A  
Sbjct: 417 MQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKM 476

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M++AM I E+M +  + P+L  Y T +WG     +   +  +++ M + G+         
Sbjct: 477 MEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTT 536

Query: 421 VADSWRAIGLAREAKRVLKSAEE 443
           + D++  +G   EA  +L+  ++
Sbjct: 537 LIDAYFKVGKTTEAVNLLQEMQD 559



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 98/404 (24%), Positives = 194/404 (48%), Gaps = 36/404 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA+  F  +I  G +P   TYT+L+ A  +         L S++++ G+  + + +
Sbjct: 370 GMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTY 429

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            A+++   E G + EA ++F  +  +G       Y +L  GY      E+++ +L+ M++
Sbjct: 430 TALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNK 489

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            KN+KP+   Y   +   C +N IE++  V+ +M+  G+  ++  Y TL  AY + G+T 
Sbjct: 490 -KNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTT 548

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +L EMQ+  ++    T G+++ G CK G ++ A+R+               F+ + 
Sbjct: 549 EAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRY---------------FDHMT 593

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           +                     G++P+++ ++ ++D       + + + +F++M+  GI 
Sbjct: 594 RN--------------------GLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGIS 633

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD  V++ L  G ++ G P +A S+   M + G+  ++  +T++I G+    ++Q A S+
Sbjct: 634 PDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSL 693

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
            ++M   GI P+      LL  Y E      A  L   M  +G+
Sbjct: 694 LDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGL 737


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 217/435 (49%), Gaps = 10/435 (2%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A+ +F+ +   G  P ++TY  ++ +L  + + +    ++ ++ KDG KP  I +  +I 
Sbjct: 150 ANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIE 209

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
           A    G ++EA+++F ++   G +P   TYN +I+G    G  + +L  ++ +S  +   
Sbjct: 210 ATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSA-RGCN 268

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+  +YNIL+R++ +K+  E+   ++  MV SG +P+ VT++ L  ++ + G    A  +
Sbjct: 269 PDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNV 328

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           L  M+   + P+  +   ++S +CKEG ++ A+ +L +M      P++V +N+++     
Sbjct: 329 LEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCK 388

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
              +D        ++E G  P V  ++T+  A  S G   K  E+  +M++ GI+PD   
Sbjct: 389 FGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEIT 448

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++ L     R G   +A  +L  M      P V+ F  V+ G C A ++   + +   M 
Sbjct: 449 YNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMV 508

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAE--ELLQVMEEKGVRPKKSTIQL-----VADSW 425
           E G  PN  +Y  L+ G   A   WRAE  EL   +   GV    S+ +L     + D +
Sbjct: 509 EKGCLPNETSYVLLIEGIAYAG--WRAEAMELANSLYRLGVISGDSSKRLNKTFPMLDVY 566

Query: 426 RAIGLAREAKRVLKS 440
           + + L+    ++L+S
Sbjct: 567 KGLSLSESKNQLLQS 581



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 199/414 (48%), Gaps = 8/414 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++E    P + +Y  +++  ++  +  S   +  ++   G  PD + +N MI +    G 
Sbjct: 122 ILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGK 181

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-QLMSQDKNVKPNDRTY 138
           ++ A ++  ++   GCKP+  TY  LI+     G+  E+L+L  +L+S  + ++P+  TY
Sbjct: 182 LELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVS--RGLRPDLYTY 239

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           N ++R  C +   + A + V  + A G  PD V+YN L R++         E+++ +M  
Sbjct: 240 NAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVL 299

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
           +   PN  T  I++S +C+EG + +A+  L  MKE  + P+   ++ LI  F      D 
Sbjct: 300 SGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDL 359

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
             + L  M   G  PD+V ++TI+      G      ++F+ + + G  P +  ++ +  
Sbjct: 360 AIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFS 419

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
                G   KA  +++ M + G+ P+ + + ++IS  C    +  A+ +   M      P
Sbjct: 420 ALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQP 479

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD-----SWRA 427
            + ++  +L G  +A + +   ELL  M EKG  P +++  L+ +      WRA
Sbjct: 480 TVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRA 533



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 193/405 (47%), Gaps = 2/405 (0%)

Query: 41  RQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS 100
           R  +    L  +  V   G KPD +L   +I     S N+ +AM++ + ++  G  P   
Sbjct: 74  RAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG-DPDVY 132

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
           +YN +I G+    + + + ++   M + +   P+  TYNI++ + CS+  +E A+ V+ +
Sbjct: 133 SYNAMISGFSKANQIDSANQVFDRM-RSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDE 191

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           ++  G +P  +TY  L  A    G    A ++  E+ +  +RP+  T   I+ G CKEG 
Sbjct: 192 LLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGM 251

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
            + A+ F+  +     +P++V +N L++ FL+    +  ++ +  M   G +P+VVT S 
Sbjct: 252 EDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSI 311

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++ ++   G + +   + + M + G+ PD + +  L   + + G    A   L  M   G
Sbjct: 312 LISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDG 371

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
             P++V + T+++  C       A+ ++EK+ E+G  P ++ Y T+           +A 
Sbjct: 372 CLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKAL 431

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
           E++  M  KG+ P + T   +       GL  EA  +L   E  R
Sbjct: 432 EMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATR 476



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/224 (20%), Positives = 111/224 (49%), Gaps = 1/224 (0%)

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C+ G   +++ FL  +      P++V+   LIKGF + ++     + + ++E +G  PDV
Sbjct: 73  CRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG-DPDV 131

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
            +++ ++  +S A  +    ++FD M   G  PD+  ++I+       G+ + A  ++  
Sbjct: 132 YSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDE 191

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           + K G  P+V+ +T +I       ++  A+ +++++   G+ P+L TY  ++ G  +   
Sbjct: 192 LLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGM 251

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             RA + ++ +  +G  P   +  ++  S+       + +R++K
Sbjct: 252 EDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMK 295



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 68/136 (50%), Gaps = 2/136 (1%)

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D H+  +L +   RAG+  ++   L S+   G  P+VV+ T +I G+ N+  +++AM + 
Sbjct: 62  DAHLMKLLNRS-CRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVM 120

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           E +   G +P++ +Y  ++ G+ +A Q   A ++   M  +G  P   T  ++  S  + 
Sbjct: 121 EILETYG-DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSR 179

Query: 429 GLAREAKRVLKSAEED 444
           G    A  V+    +D
Sbjct: 180 GKLELAFEVMDELLKD 195


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 201/415 (48%), Gaps = 1/415 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++E+  +P +  Y  L+    +  R      ++ ++      PD++ +N MI +    G 
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D A+K+  ++    C+PT  TY  LI+     G  +E+LKL+  M   + +KP+  TYN
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM-LSRGLKPDMFTYN 267

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++R  C +  ++ A+ +V  +   G +PD ++YN L RA    G+    E+++ +M + 
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           +  PN  T  I+++  C++G +E+AM  L  MKE  + P+   ++ LI  F      D  
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            + L  M   G  PD+V ++T++      G   +  EIF  + + G  P+   ++ +   
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
              +G+  +A  ++  M   G+ P+ + + ++IS  C    +  A  +   M     +P+
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           + TY  +L G+ +A +   A  +L+ M   G RP ++T  ++ +     G   EA
Sbjct: 508 VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEA 562



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 193/405 (47%), Gaps = 42/405 (10%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NI++G    +GK   A  + N L+ +  +PT+ITYT L+ A   +      L L+ ++  
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+KPD   +N +I    + G VD A ++ + ++  G +P   +YN L++   N GK EE
Sbjct: 257 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEE 316

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
             KL+  M  +K   PN  TY+IL+   C    IEEA N++  M   G+ PDA +Y+ L 
Sbjct: 317 GEKLMTKMFSEK-CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL- 374

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
                                             ++ +C+EG ++ A+ FL  M      
Sbjct: 375 ----------------------------------IAAFCREGRLDVAIEFLETMISDGCL 400

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P++V +N+++        +D   +    + E G  P+  +++T+  A  S+G   +   +
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 460

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
             +M+  GI+PD   ++ +     R G   +A  +L  MR    HP+VV +  V+ G+C 
Sbjct: 461 ILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCK 520

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           A +++ A+++ E M   G  PN  TY  L+ G G A   +RAE +
Sbjct: 521 AHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG--YRAEAM 563



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 98/398 (24%), Positives = 192/398 (48%), Gaps = 2/398 (0%)

Query: 41  RQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS 100
           R   +   L L+  + + G  PD IL   +I       N+ +A+++ + ++  G +P   
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
            YN LI G+  + + +++ ++L  M + K+  P+  TYNI++ + CS+  ++ A  V+ +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRM-RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           +++   QP  +TY  L  A    G    A +++ EM +  ++P+  T   I+ G CKEG 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           ++ A   +  ++     P+++ +N L++  L+    +  +K +T M      P+VVT+S 
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++      G + +   +   M + G+ PD + +  L   + R G    A   L +M   G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
             P++V + TV++  C   K  +A+ I+ K+ E+G +PN  +Y T+      +    RA 
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            ++  M   G+ P + T   +       G+  EA  +L
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 94/198 (47%), Gaps = 1/198 (0%)

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C+ GN  +++  L  M     +P++++   LIKGF  +++     + + ++E+FG +PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
             ++ +++ +     +     + D M      PD   ++I+       G+   A  +L  
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           +      P V+ +T +I        +  A+ + ++M   G+ P++ TY T++ G  +   
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 396 PWRAEELLQVMEEKGVRP 413
             RA E+++ +E KG  P
Sbjct: 279 VDRAFEMVRNLELKGSEP 296


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 186/384 (48%), Gaps = 39/384 (10%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  + +  +A  +F  +I++  +P   T+  L+  L R  + +    L+ ++++ G  PD
Sbjct: 17  LTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPD 76

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             ++NA+I+  S++ +  +A K   +M  + C PT  TY  ++ G     +  +++KLL 
Sbjct: 77  DAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLD 136

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +DK   PN  TYN++V   C +  ++EA  ++ +M   G  PD VTYN+        
Sbjct: 137 EM-RDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSF------- 188

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                                       + G CK   +++A +FL RM    V P++V +
Sbjct: 189 ----------------------------IKGLCKCDRVDEARKFLARMP---VTPDVVSY 217

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            ++I G     D D   + L  M   G  PDVVT+S+++D +   G + +   + D M+K
Sbjct: 218 TTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLK 277

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G  P++  ++ L     R G   KAE +L  M + G  P+VV +   I G C A ++++
Sbjct: 278 LGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKK 337

Query: 364 AMSIYEKMCEIGINPNLKTYETLL 387
           A +++++M E G  PN  +Y  L+
Sbjct: 338 AKAVFDRMVERGCTPNASSYSMLI 361



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 178/363 (49%), Gaps = 4/363 (1%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G + +   +N ++   +     D+A  +FQ+M D  C+P   T+  L++G     + E++
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
            KLL  M +   V P+D  YN L+  +       +A+  + +MV +   P  VTY  +  
Sbjct: 62  RKLLGRMKEMGCV-PDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
              +   T  A ++L EM++    PN  T  +IV G C+E  +++A + L  M      P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           ++V +NS IKG       D VD+A   +    V PDVV+++T+++    +G +     + 
Sbjct: 181 DVVTYNSFIKGLCK---CDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRML 237

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           D M   G  PD+  +S L  G+ + GE ++A  +L SM K G  PN+V + +++      
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
             + +A  +  +M   G  P++ +Y   + G  +A++  +A+ +   M E+G  P  S+ 
Sbjct: 298 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 357

Query: 419 QLV 421
            ++
Sbjct: 358 SML 360



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 167/350 (47%), Gaps = 5/350 (1%)

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
           TYN L+       + +++  + Q M  DK+ +P+  T+ IL+R  C  N +E+A  ++ +
Sbjct: 9   TYNKLLLQLTREHRHDKASAVFQEMI-DKSCQPDAFTFAILLRGLCRSNQLEKARKLLGR 67

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           M   G  PD   YN L   Y++  +  +A + L EM  N   P   T   IV G CK   
Sbjct: 68  MKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAER 127

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
             DA++ L  M++    PN+  +N +++G  + +  D   K L  M   G  PDVVT+++
Sbjct: 128 TRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNS 187

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
            +        + + ++    + +  + PD+  ++ +  G  ++G+   A  +L  M   G
Sbjct: 188 FIKGLCKCDRVDEARKF---LARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRG 244

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
             P+VV ++++I G+C   +++RAM + + M ++G  PN+  Y +LL          +AE
Sbjct: 245 CTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAE 304

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           ++L  ME +G  P   +     D        ++AK V     E R   PN
Sbjct: 305 DMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVE-RGCTPN 353



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 163/374 (43%), Gaps = 51/374 (13%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  +   +   G+ P ++TY + +  L +  R       ++++    + PD + + 
Sbjct: 162 KLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYT 218

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +IN   +SG++D A ++   M + GC P   TY++LI G+   G+ E ++ LL  M + 
Sbjct: 219 TVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLK- 277

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
              +PN   YN L+ A      I +A +++ +M   G  PD V+YN       +     +
Sbjct: 278 LGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKK 337

Query: 189 AEQMLFEMQNNQVRPNERTCGIIV----------SGYCKEGNMEDAMR------------ 226
           A+ +   M      PN  +  +++           G CK G  ++A              
Sbjct: 338 AKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICE 397

Query: 227 ---FLYRM------------KELEVHP--------NLVVFNSLIKGF-LDIKDSDGVDKA 262
              F Y +            K L++H         N+V +N L+ G  +D + SD     
Sbjct: 398 PDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETML 457

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           LT+++E G  PD VT+ T++DA    G      E+F++ VK G  PD+  +S L  G V 
Sbjct: 458 LTMVDE-GFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVH 516

Query: 323 AGEPQKAESILTSM 336
               ++A  + T +
Sbjct: 517 ENMAEEAYLLFTKL 530



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/335 (22%), Positives = 140/335 (41%), Gaps = 46/335 (13%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+   A  + + +++ G RP ++ Y +L+ AL R         ++ ++E+ G  PD + +
Sbjct: 263 GEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSY 322

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLI----------KGYGNVGKPEE 117
           NA I+   ++  V +A  +F +M + GC P  S+Y+ LI           G    G+ +E
Sbjct: 323 NACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDE 382

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +  L   +  +K  +P+   YN+++ + C +  I++A  +  +M+      + VT+N L 
Sbjct: 383 ACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILV 441

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
                      AE ML  M +    P+  T G +V   CK G    A+            
Sbjct: 442 HGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALE----------- 490

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
               +F   +KG                    G  PDVVT+S ++       +  +   +
Sbjct: 491 ----LFEEAVKG--------------------GCVPDVVTYSALITGLVHENMAEEAYLL 526

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           F  +V+    PD     +L +      +P+KAE +
Sbjct: 527 FTKLVERRWVPDDKTLGLLHRKLKLLNKPRKAEVV 561



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 1/146 (0%)

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G E ++  ++ L     R     KA ++   M      P+   F  ++ G C + ++++A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             +  +M E+G  P+   Y  L+ GY +AK   +A + L  M +    P   T   + D 
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 425 WRAIGLAREAKRVLKSAEEDRQSMPN 450
                  R+A ++L     D+   PN
Sbjct: 122 LCKAERTRDAVKLLDEM-RDKGCSPN 146


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 203/418 (48%), Gaps = 1/418 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P +  +  L+ ++ + K + ++LSL  K++  G+ PD      +IN+      VD A+ +
Sbjct: 54  PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 113

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             K+   G +P T+T+ TL++G   VGK  E+L +   M  +   +PN  TY  L+   C
Sbjct: 114 LAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGE-GFQPNVVTYGTLMNGLC 172

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               + EA N+  +M+A GI PD  TYN+L  A     E      +L EM  +++ PN  
Sbjct: 173 KDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVV 232

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           +  I+V   CKEG + +A   +  M +  V P++V + +L+ G     + D   K   +M
Sbjct: 233 SLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMM 292

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              G   +VV+++T+++ +     + K   +F++M +  + P+   +S L  G    G  
Sbjct: 293 VRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRL 352

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           Q A ++   M   G  PN+V ++ ++   C   ++  AM++ + +    ++P+++ Y   
Sbjct: 353 QDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIA 412

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           + G   A     A +L   +  +G++P   T  ++       GL  EA ++ +  +E+
Sbjct: 413 IDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDEN 470



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 198/419 (47%), Gaps = 1/419 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ GH+P   T+TTLV  L    +    L +  K+  +G +P+ + +  ++N   +   
Sbjct: 117 ILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQ 176

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           + EA+ +F +M   G  P   TYN+LI    N+ + +    LL  M + K + PN  + N
Sbjct: 177 LTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSK-IMPNVVSLN 235

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           I+V A C +  + EA +VV  M+  G++PD VTY  L   +    E   A ++   M  N
Sbjct: 236 IVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRN 295

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
               N  +   +++GYCK   ++ AM     M   E+ PN + +++LI G   +      
Sbjct: 296 GCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDA 355

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
                 M   G  P++VT+S ++D       + +   +   +  + ++PD+ V++I   G
Sbjct: 356 IALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDG 415

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             RAG+ + A  + +++   G+ P+V     +I G C    +  A  ++ +M E G   N
Sbjct: 416 MCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRN 475

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             TY T+  G  +  +  RA +LL+ M  +G     ST  L+       GL +  K++L
Sbjct: 476 GCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQIL 534



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 183/394 (46%), Gaps = 1/394 (0%)

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D+A+  F +M      P    +  L+     +      L L + M     + P+  T  
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDS-FGIPPDVYTLT 95

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           I++ ++C  N ++ A +V+ K++  G QPD  T+ TL R     G+   A  +  +M   
Sbjct: 96  IVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGE 155

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
             +PN  T G +++G CK+  + +A+     M    + P++  +NSLI    ++ +   V
Sbjct: 156 GFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHV 215

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
              L  M +  + P+VV+ + ++DA    G + +  ++ D M++ G+EPD+  ++ L  G
Sbjct: 216 TTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDG 275

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           +    E  +A  +   M + G   NVV + T+I+G+C   ++ +AM ++E+MC   + PN
Sbjct: 276 HCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPN 335

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             TY TL+ G     +   A  L   M   G  P   T  ++ D         EA  +LK
Sbjct: 336 TMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLK 395

Query: 440 SAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF 473
           + E        +   IA++ + R  +L A+   F
Sbjct: 396 AIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLF 429



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/373 (22%), Positives = 163/373 (43%), Gaps = 36/373 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L    +  EA  +F+ +I +G  P + TY +L+ AL     +K + +L++++ K  +
Sbjct: 168 MNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKI 227

Query: 61  KPDSILFNAMINACSESGNV-----------------------------------DEAMK 85
            P+ +  N +++A  + G V                                   DEA+K
Sbjct: 228 MPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVK 287

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +F  M  +GC     +YNTLI GY  + + ++++ L + M + + + PN  TY+ L+   
Sbjct: 288 VFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELI-PNTMTYSTLIHGL 346

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C    +++A  +  +MVA G  P+ VTY+ L     +      A  +L  ++ + + P+ 
Sbjct: 347 CHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDV 406

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
           +   I + G C+ G++E A      +    + P++   N +I+G       D   K    
Sbjct: 407 QVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFRE 466

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M+E G   +  T++TI           +  ++ ++M+  G   D+   ++L K     G 
Sbjct: 467 MDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGL 526

Query: 326 PQKAESILTSMRK 338
            Q  + IL    +
Sbjct: 527 DQSVKQILCEFMR 539


>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
 gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
          Length = 941

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/441 (25%), Positives = 214/441 (48%), Gaps = 42/441 (9%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           Y  ++ A  +        +L+ ++E++G+     +++ M++  +   N ++ + +F+++K
Sbjct: 402 YGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLK 461

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
           + G  P+  TY  LI  Y  +GK  ++L++ ++M +   +K N +TY++L+  +      
Sbjct: 462 ECGFAPSVITYGCLINMYTKIGKVSKALEVSKMM-KSVGIKHNMKTYSMLINGFLKLKDW 520

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
             A+ V   ++  G++PD V YN + +A+   G   RA  M+ EMQ  + RP  RT   I
Sbjct: 521 TNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPI 580

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF-- 269
           + G+ + G M  A+     M+     P +  FN+L+ G ++ +    ++KA+ +++E   
Sbjct: 581 IHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRK---MEKAVEILDEMAL 637

Query: 270 -GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI------------------ 310
            GV PD  T++TIM  +++ G  GK  E F  M   G++ D+                  
Sbjct: 638 AGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQS 697

Query: 311 -----------------HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
                             V++IL  G+ R G+  +A  ++  M + GV P++  +T+ I+
Sbjct: 698 ALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFIN 757

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             C A  M RA    E+M   G+ PN+KTY TL+ G+  A  P +A    + ++  G++P
Sbjct: 758 ACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKP 817

Query: 414 KKSTIQLVADSWRAIGLAREA 434
            K+    +  S  +     EA
Sbjct: 818 DKAVYHCLMTSLLSRATVAEA 838



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 197/388 (50%), Gaps = 7/388 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+    GK  +A  +   +   G +  + TY+ L+    + K + +  ++   V KDG+
Sbjct: 476 INMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGL 535

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD +L+N +I A    GN+D A+ + ++M+   C+PT+ T+  +I G+   G+   +L+
Sbjct: 536 KPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALE 595

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +  +M +   + P   T+N LV     K  +E+A  ++ +M  +G+ PD  TY T+   Y
Sbjct: 596 IFDMMRRSGCI-PTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGY 654

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A  G+T +A +   +M+N  ++ +  T   ++   CK G M+ A+     M   ++  N 
Sbjct: 655 AALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNT 714

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            V+N LI G+    D       +  M + GV+PD+ T+++ ++A   AG M +  +  ++
Sbjct: 715 FVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEE 774

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M  AG++P++  ++ L  G+  A  P+KA S    ++  G+ P+  ++  +++   +   
Sbjct: 775 MEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKAVYHCLMTSLLSRAT 834

Query: 361 MQRA------MSIYEKMCEIGINPNLKT 382
           +  A      +SI  +M E  +  ++ T
Sbjct: 835 VAEAYIYSGILSICREMIEFELTVDMGT 862



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 91/387 (23%), Positives = 180/387 (46%), Gaps = 1/387 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P+   +  +V    R+            +   G+ P S ++ ++I+A +   +++EA+ 
Sbjct: 291 KPSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALS 350

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
             +KM + G + +  TY+ ++ G+   G  E +    +  +++++   N   Y  ++ A+
Sbjct: 351 CVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFK-KAKERHTNLNAYIYGNIIYAY 409

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C   +++ A  +V +M   GI      Y+T+   Y       +   +   ++     P+ 
Sbjct: 410 CQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSV 469

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T G +++ Y K G +  A+     MK + +  N+  ++ LI GFL +KD          
Sbjct: 470 ITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFED 529

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           + + G+KPDVV ++ I+ A+   G M +   +  +M K    P    F  +  G+ RAGE
Sbjct: 530 VIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGE 589

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            ++A  I   MR+ G  P V  F  ++ G     KM++A+ I ++M   G++P+  TY T
Sbjct: 590 MRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTT 649

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVR 412
           ++ GY       +A E    M  +G++
Sbjct: 650 IMHGYAALGDTGKAFEYFTKMRNEGLQ 676



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/446 (21%), Positives = 197/446 (44%), Gaps = 36/446 (8%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  H A   F  +   G  P+   YT+L+ A    +  +  LS + K+ ++G++   + 
Sbjct: 307 RGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVT 366

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ ++   ++ GN + A   F+K K+         Y  +I  Y      + +  L++ M 
Sbjct: 367 YSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMDRAEALVREME 426

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++    P D  Y+ ++  +    + E+   V  ++   G  P  +TY  L   Y + G+ 
Sbjct: 427 EEGIDAPLD-IYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKV 485

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A ++   M++  ++ N +T  ++++G+ K  +  +A      + +  + P++V++N++
Sbjct: 486 SKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNI 545

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF-------- 298
           IK F  + + D     +  M++   +P   TF  I+  ++ AG M +  EIF        
Sbjct: 546 IKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGC 605

Query: 299 ---------------------------DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
                                      D+M  AG+ PD H ++ +  GY   G+  KA  
Sbjct: 606 IPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFE 665

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
             T MR  G+  +V  +  ++   C + +MQ A+++  +M    I  N   Y  L+ G+ 
Sbjct: 666 YFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWA 725

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKST 417
                W A +L+Q M ++GV+P   T
Sbjct: 726 RRGDIWEAADLMQQMNQEGVQPDIHT 751



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 160/332 (48%), Gaps = 5/332 (1%)

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F+++K    KP+   +  ++  Y   G    + +  + M + + + P+   Y  L+ A+ 
Sbjct: 286 FERIK----KPSRREFGLMVGYYARRGDMHRARQTFESM-RARGIDPSSHVYTSLIHAYA 340

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               +EEA + V KM   GI+   VTY+ +   +A++G    A+    + +      N  
Sbjct: 341 VGRDMEEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAY 400

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
             G I+  YC+  NM+ A   +  M+E  +   L ++++++ G+  I++ +        +
Sbjct: 401 IYGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRL 460

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           +E G  P V+T+  +++ ++  G + K  E+   M   GI+ ++  +S+L  G+++  + 
Sbjct: 461 KECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDW 520

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             A ++   + K G+ P+VV++  +I  +C    M RA+ + ++M +    P  +T+  +
Sbjct: 521 TNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPI 580

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
           + G+  A +  RA E+  +M   G  P   T 
Sbjct: 581 IHGFARAGEMRRALEIFDMMRRSGCIPTVHTF 612



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/293 (19%), Positives = 133/293 (45%)

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           E W  V        +P    +  +   YA+ G+ +RA Q    M+   + P+      ++
Sbjct: 277 ENWQAVVSAFERIKKPSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLI 336

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
             Y    +ME+A+  + +M E  +  +LV ++ ++ GF    +++  D      +E    
Sbjct: 337 HAYAVGRDMEEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTN 396

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            +   +  I+ A+  A  M + + +  +M + GI+  + ++  +  GY      +K   +
Sbjct: 397 LNAYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIV 456

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              +++ G  P+V+ +  +I+ +    K+ +A+ + + M  +GI  N+KTY  L+ G+ +
Sbjct: 457 FKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLK 516

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
            K    A  + + + + G++P       +  ++  +G    A  ++K  +++R
Sbjct: 517 LKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKER 569


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 203/422 (48%), Gaps = 40/422 (9%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G+G+   A  + + ++  G  P ++TYT L+ A  ++  +K  + L+ ++   G  PD
Sbjct: 162 LCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPD 221

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N ++N   + G VD+AM+  + +   GC+P T +YN ++KG     + E++ KL+ 
Sbjct: 222 IVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMA 281

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            MS+ K   PN  T+N+L+   C +  +E A  ++ ++   G  P++++YN +  A    
Sbjct: 282 EMSR-KGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHA---- 336

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                                          +CK+  M+ AM F+  M     +P++V +
Sbjct: 337 -------------------------------FCKQKKMDRAMAFVELMVSSGCYPDIVSY 365

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+L+       + D   + L  +++ G  P +++++T++D  + AG   +  E+ ++MV 
Sbjct: 366 NTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVT 425

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G++PDI  +S ++ G  R G  ++A      ++  G+ PN V++  ++ G C       
Sbjct: 426 KGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHS 485

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK----KSTIQ 419
           A+ ++  M   G  PN  TY  L+ G         A E++  +  +GV  K    K  I+
Sbjct: 486 AIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTLVNKGAIR 545

Query: 420 LV 421
           L+
Sbjct: 546 LL 547



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 206/435 (47%), Gaps = 9/435 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  EA  +          P +++Y  +VA      +  +   L++ +    M+PD
Sbjct: 100 LCASGRTAEARRVL-----ASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPD 151

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +  +N +I      G  D A+ +   M   GC P   TY  L++        ++++KLL 
Sbjct: 152 TYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLD 211

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +DK   P+  TYN++V   C +  +++A   +  + + G +P+ V+YN + +     
Sbjct: 212 EM-RDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTA 270

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                AE+++ EM      PN  T  +++S  C+ G +E AM  L ++ +    PN + +
Sbjct: 271 ERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSY 330

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N ++  F   K  D     + LM   G  PD+V+++T++ A    G +    E+   +  
Sbjct: 331 NPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKD 390

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G  P +  ++ +  G  +AG+ ++A  +L  M   G+ P+++ ++T+ SG C   +++ 
Sbjct: 391 KGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEE 450

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+  + K+ ++GI PN   Y  +L G  + +    A +L   M   G  P +ST  ++ +
Sbjct: 451 AIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIE 510

Query: 424 SWRAIGLAREAKRVL 438
                GL +EA+ ++
Sbjct: 511 GLAYEGLVKEAREMM 525



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 193/398 (48%), Gaps = 17/398 (4%)

Query: 39  LTRQKRFKSILSLISKVEKDGMKPDSI-LFNAMINACSESGNVDEAMKIFQKMKDSGCKP 97
           L R+   +  + L+  +   G++P +     A+I     SG   EA ++      + C+P
Sbjct: 66  LVRRGDLEEAIRLVESMA--GLEPSAAGPCAALIKKLCASGRTAEARRVL-----ASCEP 118

Query: 98  TTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
              +YN ++ GY   G+ + + +L+  M  +    P+  TYN L+R  C +   + A  V
Sbjct: 119 DVMSYNAMVAGYCVTGQLDNARRLVAAMPME----PDTYTYNTLIRGLCGRGRTDNALAV 174

Query: 158 VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
           +  M+  G  PD VTY  L  A  +     +A ++L EM++    P+  T  ++V+G C+
Sbjct: 175 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQ 234

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
           EG ++DAM FL  +      PN V +N ++KG    +  +  +K +  M   G  P+VVT
Sbjct: 235 EGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVT 294

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           F+ ++      GL+    EI D + K G  P+   ++ +   + +  +  +A + +  M 
Sbjct: 295 FNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMV 354

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
             G +P++V + T+++  C   ++  A+ +  ++ + G  P L +Y T++ G  +A +  
Sbjct: 355 SSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTE 414

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
            A ELL  M  KG++P   T   ++      GL RE +
Sbjct: 415 EALELLNEMVTKGLQPDIITYSTISS-----GLCREGR 447



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 157/306 (51%), Gaps = 1/306 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  +G+  +A      L   G  P  ++Y  ++  L   +R++    L++++ + G 
Sbjct: 229 VNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGR 288

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + FN +I+     G V+ AM+I  ++   GC P + +YN ++  +    K + ++ 
Sbjct: 289 PPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMA 348

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            ++LM       P+  +YN L+ A C    ++ A  +++++   G  P  ++YNT+    
Sbjct: 349 FVELMVS-SGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGL 407

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+T  A ++L EM    ++P+  T   I SG C+EG +E+A++   +++++ + PN 
Sbjct: 408 TKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNT 467

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V++N+++ G    + +       T M   G  P+  T++ +++  +  GL+ + +E+  +
Sbjct: 468 VLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAE 527

Query: 301 MVKAGI 306
           +   G+
Sbjct: 528 LCSRGV 533



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 3/139 (2%)

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           V A  EPD+  ++ +  GY   G+   A  ++ +M    + P+   + T+I G C   + 
Sbjct: 112 VLASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTLIRGLCGRGRT 168

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             A+++ + M   G  P++ TY  LL    +     +A +LL  M +KG  P   T  +V
Sbjct: 169 DNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVV 228

Query: 422 ADSWRAIGLAREAKRVLKS 440
            +     G   +A   LKS
Sbjct: 229 VNGICQEGRVDDAMEFLKS 247


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 202/414 (48%), Gaps = 2/414 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT  TY  L+   TR  R +  L+   ++ + G++ + I+ N ++    E+   DEA+ I
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDI 168

Query: 87  -FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV-KPNDRTYNILVRA 144
              +  + GC P   +Y+ L+K   + GK  ++  LL++M++   V  P+   Y+ ++  
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDG 228

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +  +  + +A ++  +MV  GI PD VTY+++  A  +     +AE  L +M N  V PN
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   ++ GY   G  ++A+R    M+   + P++V  + L+                 
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M   G  P+V +++ +++ +++ G +    ++FD M+  GI PDI+ F++L K Y   G
Sbjct: 349 TMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 408

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              KA  I   MR +GV P+VV + TVI+  C   KM  AM  + +M + G+ P+   Y 
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            L+ G+       +A+EL+  +   G+         + ++   +G   +A+ + 
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 522



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/434 (23%), Positives = 208/434 (47%), Gaps = 3/434 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGH--RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK 61
           L  +GK  +A  +   + E G    P ++ Y+T++    ++        L  ++ + G+ 
Sbjct: 192 LCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIP 251

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           PD + ++++++A  ++  +D+A    ++M + G  P   TYN LI GY + G+ +E++++
Sbjct: 252 PDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRV 311

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
            + M +  ++ P+  T ++L+ + C    I+EA +V   M   G  P+  +Y  +   YA
Sbjct: 312 FKEMRR-HSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYA 370

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
             G       +   M  + + P+  T  +++  Y   G ++ AM     M++  V P++V
Sbjct: 371 TKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVV 430

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            + ++I     I   D   +    M + GV PD   +  ++  + + G + K +E+  ++
Sbjct: 431 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEI 490

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           +  G+  DI  FS +     + G    A++I       G+HP  V+++ ++ G+C   KM
Sbjct: 491 MNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKM 550

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           ++A+ +++ M   GI PN   Y TL+ GY +  +      L + M +KG++P      ++
Sbjct: 551 EKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 610

Query: 422 ADSWRAIGLAREAK 435
            D     G    AK
Sbjct: 611 IDGLFEAGRTVPAK 624



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 202/424 (47%), Gaps = 7/424 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L   GK  EA  +F+ +  +G  P + +YT ++     +     +  L   +  DG+
Sbjct: 331 MGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI 390

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   FN +I A +  G +D+AM IF +M+D G KP   TY T+I     +GK +++++
Sbjct: 391 APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 450

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M  D+ V P+   Y+ L++ +C+  S+ +A  ++ +++ +G+  D V ++++    
Sbjct: 451 KFNQMI-DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 509

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A+ +     N  + P      +++ GYC  G ME A+R    M    + PN 
Sbjct: 510 CKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPND 569

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           VV+ +L+ G+  I     +D+ L+L  E    G+KP  + ++ I+D    AG     +  
Sbjct: 570 VVYGTLVNGYCKIGR---IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVK 626

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F +M ++GI  +   ++I+ +G  +     +A  +   +R   V  N++   T+I+G   
Sbjct: 627 FHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQ 686

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             +++ A  ++  +   G+ P + TY  ++    +      AE++   M+  G  P    
Sbjct: 687 TRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRL 746

Query: 418 IQLV 421
           +  V
Sbjct: 747 LNHV 750



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 203/423 (47%), Gaps = 9/423 (2%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM--KPDSILFNAMINACSESGN 79
           E G  P + +Y+ L+ +L  Q +      L+  + + G    PD + ++ +I+   + G+
Sbjct: 175 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGD 234

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V++A  +F++M   G  P   TY++++         +++   L+ M  +K V PN+ TYN
Sbjct: 235 VNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMV-NKGVLPNNWTYN 293

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+  + S    +EA  V  +M    I PD VT + L  +  +YG+   A  +   M   
Sbjct: 294 NLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK 353

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              PN  +  I+++GY  +G + D       M    + P++  FN LIK +    +   +
Sbjct: 354 GQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAY---ANCGML 410

Query: 260 DKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           DKA+ +   M + GVKPDVVT+ T++ A    G M    E F+ M+  G+ PD + +  L
Sbjct: 411 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCL 470

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
            +G+   G   KA+ +++ +   G+H ++V F+++I+  C   ++  A +I++    +G+
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
           +P    Y  L+ GY    +  +A  +   M   G+ P       + + +  IG   E   
Sbjct: 531 HPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLS 590

Query: 437 VLK 439
           + +
Sbjct: 591 LFR 593



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 196/418 (46%), Gaps = 36/418 (8%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  ++A  +F  +++ G  P  +TY+++V AL + +      + + ++   G+ P++  
Sbjct: 232 EGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWT 291

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I   S +G   EA+++F++M+     P   T + L+      GK +E+  +   M+
Sbjct: 292 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMA 351

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K   PN  +Y I++  + +K  + +  ++   M+  GI PD  T+N L +AYA  G  
Sbjct: 352 M-KGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGML 410

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A  +  EM+++ V+P+  T   +++  C+ G M+DAM    +M +  V P+   ++ L
Sbjct: 411 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCL 470

Query: 247 IKGF----------------------LDIKDSDGVDKALT-------------LMEEFGV 271
           I+GF                      LDI     +   L              L    G+
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            P  V +S +MD +   G M K   +FD MV AGIEP+  V+  L  GY + G   +  S
Sbjct: 531 HPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLS 590

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           +   M + G+ P+ +++  +I G   A +   A   + +M E GI  N  TY  +L G
Sbjct: 591 LFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRG 648



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/435 (21%), Positives = 202/435 (46%), Gaps = 1/435 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F  +      P ++T + L+ +L +  + K    +   +   G  P+   +
Sbjct: 303 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSY 362

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             M+N  +  G + +   +F  M   G  P   T+N LIK Y N G  ++++ +   M +
Sbjct: 363 TIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM-R 421

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D  VKP+  TY  ++ A C    +++A     +M+  G+ PD   Y+ L + +  +G   
Sbjct: 422 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLL 481

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A++++ E+ NN +  +      I++  CK G + DA         + +HP  VV++ L+
Sbjct: 482 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLM 541

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G+  +   +   +    M   G++P+ V + T+++ +   G + +   +F +M++ GI+
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 601

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P   +++I+  G   AG    A+     M + G+  N   +  V+ G         A+ +
Sbjct: 602 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFL 661

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           ++++  + +  N+ T  T++ G  + ++   A++L   +   G+ P   T  ++  +   
Sbjct: 662 FKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIK 721

Query: 428 IGLAREAKRVLKSAE 442
            GL  EA+ +  S +
Sbjct: 722 EGLVEEAEDMFSSMQ 736



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 157/329 (47%), Gaps = 1/329 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A   FN +I++G  P    Y  L+              LIS++  +GM  D + F
Sbjct: 443 GKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFF 502

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +++IN   + G V +A  IF    + G  PT   Y+ L+ GY  VGK E++L++   M  
Sbjct: 503 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVS 562

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              ++PND  Y  LV  +C    I+E  ++  +M+  GI+P  + YN +     + G T 
Sbjct: 563 -AGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTV 621

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A+    EM  + +  N+ T  I++ G  K    ++A+     ++ + V  N++  N++I
Sbjct: 622 PAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMI 681

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G    +  +        +   G+ P VVT+S ++      GL+ + +++F  M  AG E
Sbjct: 682 AGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 741

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSM 336
           PD  + + + +  ++  E  +A + L+ +
Sbjct: 742 PDSRLLNHVVRELLKKNEIVRAGAYLSKI 770



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 80/369 (21%), Positives = 177/369 (47%), Gaps = 7/369 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  IFN + + G +P ++TY T++AAL R  +    +   +++   G+ PD   +
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +I      G++ +A ++  ++ ++G       ++++I     +G+  ++  +  L + 
Sbjct: 468 HCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL-TV 526

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  + P    Y++L+  +C    +E+A  V   MV++GI+P+ V Y TL   Y + G   
Sbjct: 527 NVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRID 586

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
               +  EM    ++P+     II+ G  + G    A    + M E  +  N   +N ++
Sbjct: 587 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVL 646

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +G      +   D+A+ L +E     VK +++T +T++        + + +++F  + ++
Sbjct: 647 RGLF---KNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRS 703

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+ P +  +SI+    ++ G  ++AE + +SM+  G  P+  +   V+       ++ RA
Sbjct: 704 GLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 763

Query: 365 MSIYEKMCE 373
            +   K+ E
Sbjct: 764 GAYLSKIDE 772



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/296 (21%), Positives = 135/296 (45%), Gaps = 4/296 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  +A  IF+  +  G  PT + Y+ L+       + +  L +   +   G+
Sbjct: 506 INNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ +++  ++N   + G +DE + +F++M   G KP+T  YN +I G    G+   +  
Sbjct: 566 EPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 625

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M++   +  N  TYNI++R        +EA  +  ++ A  ++ + +T NT+    
Sbjct: 626 KFHEMTE-SGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGM 684

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q      A+ +   +  + + P   T  I+++   KEG +E+A      M+     P+ 
Sbjct: 685 FQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDS 744

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            + N +++  L   +       L+ ++E     + +T   ++D +SS    G C+E
Sbjct: 745 RLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSK---GTCRE 797



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 108/256 (42%), Gaps = 36/256 (14%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  +F+ ++  G  P  + Y TLV    +  R    LSL  ++ + G+KP +IL+
Sbjct: 548 GKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY 607

Query: 68  NAMINACSESGNV-----------------------------------DEAMKIFQKMKD 92
           N +I+   E+G                                     DEA+ +F++++ 
Sbjct: 608 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRA 667

Query: 93  SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIE 152
              K    T NT+I G     + EE+  L   +S+   V P   TY+I++     +  +E
Sbjct: 668 MNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV-PCVVTYSIMITNLIKEGLVE 726

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           EA ++   M  +G +PD+   N + R   +  E  RA   L ++          T  ++V
Sbjct: 727 EAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLV 786

Query: 213 SGYCKEGNMEDAMRFL 228
             +  +G   + +RFL
Sbjct: 787 DLFSSKGTCREHIRFL 802


>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Brachypodium distachyon]
          Length = 800

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 126/513 (24%), Positives = 230/513 (44%), Gaps = 76/513 (14%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA   F  L   GH P ++TY  L+    +   +   L ++ ++E+ G KPD++ +
Sbjct: 272 GLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTY 331

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +  + + +G  +EA K    M   G  P   TYNT++  YGN GK +E+L L   M +
Sbjct: 332 NELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKK 391

Query: 128 DKNVKPNDRTYNILV--------------------RAWCSKNSIEEAWNVV--------- 158
           +  + P   TYN+++                    R+ C+ N +   WN +         
Sbjct: 392 NGFI-PYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRV--TWNTMLAVCGKRGM 448

Query: 159 ---------------------------------------YKM----VASGIQPDAVTYNT 175
                                                  +KM     A+G  P   TYN 
Sbjct: 449 EGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNA 508

Query: 176 LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
           L    ++ G+   A+ ++ +M+N   +PN+ +  +++  + K GN          + E  
Sbjct: 509 LLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYEGT 568

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           V P+ V+  +L+      +  +G+++A   +   G KPD+V F++++  ++  G+  K  
Sbjct: 569 VFPSWVILRTLVISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAG 628

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           E+FD + + G+ PD+  ++ +   Y ++ E  +AE IL  ++   + P+VV + TV++G+
Sbjct: 629 EMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGF 688

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C    ++ A  I  +M   G+ P + TY TL+ GY   +    A E++  M ++ + P +
Sbjct: 689 CKQGLIKEAQRILSEMIADGVRPCVVTYHTLVGGYASREMFSEAREVVSYMIQRNLSPME 748

Query: 416 STIQLVADSWRAIGLAREAKRVL-KSAEEDRQS 447
            T + V DS+       EA+  L + AE DR S
Sbjct: 749 LTYRRVVDSYCKAKRFDEARGFLYEIAETDRNS 781



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 219/479 (45%), Gaps = 45/479 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDG 59
           ++ L  +G+   A  +F  L  EG  PT + Y  ++    R  R +  I++++ ++   G
Sbjct: 194 LHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYGRMGRSWPQIVAMLEEMRAAG 253

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           ++PD    + +I AC   G VDEA+  F+ +K  G  P   TYN L++ +G  G   E+L
Sbjct: 254 VEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGKAGNYMEAL 313

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           ++L+ M ++   KP+  TYN L  ++      EEA   +  MV+ GI P+A TYNT+  A
Sbjct: 314 RVLKEM-EESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYNTIMTA 372

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           Y   G+   A  +   M+ N   P   T  +I+    K+      +  L  M      PN
Sbjct: 373 YGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPN 432

Query: 240 LVVFNSLIKGFLDIKDSDG-VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
            V +N+++      +  +G V + L  M+  GV+    TF+T++ A+   G      +++
Sbjct: 433 RVTWNTML-AVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMY 491

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN-------------- 344
           D+M  AG  P +  ++ L     R G+   A+SI+  M+  G  PN              
Sbjct: 492 DEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKG 551

Query: 345 ----------------------VVMFTTVISGW-CNAVK-MQRAMSIYEKMCEIGINPNL 380
                                 V++ T VIS + C  ++ ++RA   ++++   G  P+L
Sbjct: 552 GNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERA---FQEVMARGHKPDL 608

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             + ++L  Y +     +A E+   +++ G+ P   T   + D +     + EA+++LK
Sbjct: 609 VIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILK 667



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/414 (22%), Positives = 183/414 (44%), Gaps = 36/414 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA  +F+ + + G  P + TY  ++  L ++ RF  +L ++ ++ + G  P+ + +
Sbjct: 377 GKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTW 436

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N M+  C + G      ++ ++MK  G +    T+NTLI  YG  G    + K+   M+ 
Sbjct: 437 NTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTA 496

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                P   TYN L+     +     A +++ KM   G +P+ ++Y+ L + +A+ G   
Sbjct: 497 -AGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAA 555

Query: 188 RAEQMLFEMQNNQVRPN--------------ERTCGI---------------------IV 212
             E +  E+    V P+               R  GI                     ++
Sbjct: 556 GIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSML 615

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           S Y K G    A      +K+  + P+L+ +NS++  +    +S   +K L  ++   +K
Sbjct: 616 SMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLKTSQLK 675

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           PDVV+++T+M+ +   GL+ + Q I  +M+  G+ P +  +  L  GY       +A  +
Sbjct: 676 PDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRPCVVTYHTLVGGYASREMFSEAREV 735

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           ++ M +  + P  + +  V+  +C A +   A     ++ E   N + K   TL
Sbjct: 736 VSYMIQRNLSPMELTYRRVVDSYCKAKRFDEARGFLYEIAETDRNSDQKLLSTL 789



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 90/398 (22%), Positives = 173/398 (43%), Gaps = 19/398 (4%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKP--------DSILFNAMINACSESGNVDEAMKI 86
           +V  L R+ +  ++  L+     D M P        D   +  +++A S  G  + A+++
Sbjct: 155 VVRTLAREGQHDAVCDLL-----DEMLPLPPGSPGLDVRAYTTVLHALSHEGRYERALEL 209

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F ++K  G  PT   YN ++  YG +G+    +  +    +   V+P+  T + ++ A  
Sbjct: 210 FAELKREGVAPTHVMYNVMLDVYGRMGRSWPQIVAMLEEMRAAGVEPDGFTASTVIAACG 269

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               ++EA      + + G  P  VTYN L + + + G    A ++L EM+ +  +P+  
Sbjct: 270 RDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAV 329

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL- 265
           T   +   Y + G  E+A + L  M    + PN   +N+++  +    ++  VD+AL L 
Sbjct: 330 TYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYNTIMTAY---GNAGKVDEALALF 386

Query: 266 --MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M++ G  P V T++ I+             E+  +M ++G  P+   ++ +     + 
Sbjct: 387 DWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKR 446

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G       +L  M+  GV      F T+IS +        A  +Y++M   G  P L TY
Sbjct: 447 GMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTY 506

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             LL           A+ ++  M+ +G +P   +  L+
Sbjct: 507 NALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLL 544



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 88/176 (50%), Gaps = 1/176 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++    G   +A  +F+ + + G  P LITY +++    +         ++ +++   +
Sbjct: 615 LSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLKTSQL 674

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD + +N ++N   + G + EA +I  +M   G +P   TY+TL+ GY +     E+ +
Sbjct: 675 KPDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRPCVVTYHTLVGGYASREMFSEARE 734

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           ++  M Q +N+ P + TY  +V ++C     +EA   +Y++  +    D    +TL
Sbjct: 735 VVSYMIQ-RNLSPMELTYRRVVDSYCKAKRFDEARGFLYEIAETDRNSDQKLLSTL 789


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 203/389 (52%), Gaps = 7/389 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA  ++  ++++G  PT ++Y +++    RQ       S+ S +   G+KP+
Sbjct: 463 LCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPN 522

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I ++ +++   ++G+ + A  +F +M D    P+  TYN  I G   VG+  E+  +L+
Sbjct: 523 VITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLK 582

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
              + K   P   TYN ++  +  + S+  A     +M  SG+ P+ +TY TL   + + 
Sbjct: 583 KFVE-KGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKN 641

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
             T  A +M  EM+N  +  +    G ++ G+CK+ ++E A      + +  + PN V++
Sbjct: 642 NNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIY 701

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           NSLI G+   ++ + ++ AL L +     G+  D+ T++T++D     G +    +++ +
Sbjct: 702 NSLISGY---RNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSE 758

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   GI PDI ++++L  G    G+ + A+ IL  M +  + PNV ++  +I+G   A  
Sbjct: 759 MSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGN 818

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           +Q A  ++ +M + G+ PN  TY+ L+ G
Sbjct: 819 LQEAFRLHNEMLDKGLTPNDTTYDILING 847



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 191/393 (48%), Gaps = 1/393 (0%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
           + TY +L++ L ++ +     +L  K+   G+ P  + +N+MI      GN+D A  +F 
Sbjct: 453 IFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFS 512

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
            M D G KP   TY+ L+ GY   G  E +  +   M  D+N+ P+D TYNI +   C  
Sbjct: 513 DMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMV-DENIVPSDFTYNIKINGLCKV 571

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
               EA +++ K V  G  P  +TYN++   + + G    A     EM  + V PN  T 
Sbjct: 572 GRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITY 631

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             +++G+CK  N + A++    M+   +  ++  + +LI GF   +D +      + + +
Sbjct: 632 TTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLD 691

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G+ P+ V +++++  + +   M     +   M+  GI  D+  ++ L  G ++ G    
Sbjct: 692 GGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVL 751

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  + + M   G+ P+++++T +I+G C   +++ A  I  +M    I PN+  Y  L+ 
Sbjct: 752 ALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIA 811

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           G+ +A     A  L   M +KG+ P  +T  ++
Sbjct: 812 GHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDIL 844



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 229/476 (48%), Gaps = 39/476 (8%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           V +G   EA  + + ++  G +  ++  TTLV    +Q +  S L    K+ ++G  P+ 
Sbjct: 325 VKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNR 384

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ- 123
           + +  +I  C ++GN+ +A  ++ +MK+    PT    N+LI+G+  V   EE+ KL   
Sbjct: 385 VTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDE 444

Query: 124 --------------LMS------------------QDKNVKPNDRTYNILVRAWCSKNSI 151
                         L+S                   DK + P   +YN ++   C + ++
Sbjct: 445 AVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNL 504

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           + A +V   M+  G++P+ +TY+ L   Y + G+T  A  +   M +  + P++ T  I 
Sbjct: 505 DMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIK 564

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---MEE 268
           ++G CK G   +A   L +  E    P  + +NS++ GF  IK+   V  ALT    M E
Sbjct: 565 INGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGF--IKEG-SVSSALTAYREMCE 621

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            GV P+V+T++T+++ +          ++ ++M   G+E DI  +  L  G+ +  + + 
Sbjct: 622 SGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIET 681

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  + + +   G+ PN V++ ++ISG+ N   M+ A+++ ++M   GI+ +L+TY TL+ 
Sbjct: 682 ASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLID 741

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           G  +  +   A +L   M  KG+ P      ++ +     G    A+++L   E D
Sbjct: 742 GLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERD 797



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 198/428 (46%), Gaps = 8/428 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N  +   K ++A   FN L+E    P +     L+ AL +         +  K+   G+
Sbjct: 181 LNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGV 240

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D    + M+ A  +  N +EA K F + K  G K   + Y+ +I+ +      E +  
Sbjct: 241 HGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACG 300

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M +DK   P++ T+  ++ A   + ++ EA  +  +MV+ G+Q + V   TL + Y
Sbjct: 301 LLKDM-RDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGY 359

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +   A +   +M  N   PN  T  +++   CK GNM  A     +MK   + P +
Sbjct: 360 CKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTV 419

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV---TFSTIMDAWSSAGLMGKCQEI 297
            + NSLI+GFL ++  +   K   L +E  V  D+    T+++++      G M +   +
Sbjct: 420 FIVNSLIRGFLKVESREEASK---LFDE-AVACDIANIFTYNSLLSWLCKEGKMSEATTL 475

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           +  M+  G+ P    ++ +  G+ R G    A S+ + M   G+ PNV+ ++ ++ G+  
Sbjct: 476 WQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFK 535

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
               + A  ++++M +  I P+  TY   + G  +  +   A+++L+   EKG  P   T
Sbjct: 536 NGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLT 595

Query: 418 IQLVADSW 425
              + D +
Sbjct: 596 YNSIMDGF 603



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 137/289 (47%), Gaps = 1/289 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EA  +    +E+G  P  +TY +++    ++    S L+   ++ + G+
Sbjct: 565 INGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGV 624

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I +  +IN   ++ N D A+K+  +M++ G +   + Y  LI G+      E +  
Sbjct: 625 SPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASW 684

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   +  D  + PN   YN L+  + + N++E A N+  +M+  GI  D  TY TL    
Sbjct: 685 LFSEL-LDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGL 743

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A  +  EM    + P+     ++++G C +G +E+A + L  M+   + PN+
Sbjct: 744 LKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNV 803

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            ++N+LI G     +     +    M + G+ P+  T+  +++     G
Sbjct: 804 PIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGG 852



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 116/269 (43%)

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           R YN L+ ++   N + +A     ++V S I P     N L  A  +    Y A ++  +
Sbjct: 175 RIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEK 234

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M    V  +  T  I++    K+ N E+A +F    K   V  +   ++ +I+ F    D
Sbjct: 235 MVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLD 294

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            +     L  M + G  P   TF++++ A    G M +   + D+MV  G++ ++ V + 
Sbjct: 295 VELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATT 354

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L KGY +  +   A      M + G  PN V +  +I   C    M +A  +Y +M    
Sbjct: 355 LVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKN 414

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQ 404
           I P +    +L+ G+ + +    A +L  
Sbjct: 415 ICPTVFIVNSLIRGFLKVESREEASKLFD 443


>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 517

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 201/407 (49%), Gaps = 12/407 (2%)

Query: 34  TLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS 93
           TL+ + T ++    + + +S++      P   +F  +I A SE G VDEA++++ K+   
Sbjct: 91  TLLQSCTPRRVNSLVFNALSQLRGSKFNPS--VFGVLIIAFSEVGLVDEALRVYLKV--- 145

Query: 94  GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
           G  P     N L+ G       +   +L   M   + + P   TYN+LV A C +  +  
Sbjct: 146 GAFPAVQACNALLNGLLKKSSFDIMWELYNNMVS-RRLFPTVVTYNVLVDACCRQGDVLR 204

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A +++ +MV  GI+P  V Y TL        +   AE M  +M+++ V PN  T  +++ 
Sbjct: 205 AKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMD 264

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
           GYCK  N++ A+     M +  + PN+V F  LI     +++     +    M +FGV P
Sbjct: 265 GYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVP 324

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           +VV F++++D +S AG   +  ++  +M K  I PD+  +SIL K   R G  ++A+ IL
Sbjct: 325 NVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDIL 384

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE------KMCEIGINPNLKTYETLL 387
             M K GV  N V++ ++I G+C    M++A+ I++       M   G+ P+   Y  +L
Sbjct: 385 KRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVML 444

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
            G+  AK       L   M + G+ P + T Q+V   ++  G  + A
Sbjct: 445 QGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVVRRGYQDNGYLKSA 491



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 167/324 (51%), Gaps = 15/324 (4%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA-C 74
           ++N ++     PT++TY  LV A  RQ       SLIS++ K G++P  +++  +I+  C
Sbjct: 173 LYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLC 232

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
           SES  + EA  +F++MKDSG  P   TYN L+ GY      +++L L Q M  D  ++PN
Sbjct: 233 SES-KLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDD-GLQPN 290

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
             T+ IL+ A C    +  A     +M   G+ P+ V +N+L   Y++ G    A  +L 
Sbjct: 291 VVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLL 350

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           EM+  ++ P+  T  I++   C+ G +E+A   L RM++  V  N VV+NSLI G+    
Sbjct: 351 EMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYC--- 407

Query: 255 DSDGVDKALTL---------MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
               ++KAL +         M   G++PD + ++ ++    +A  M     +  DM+K G
Sbjct: 408 KEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHADMIKMG 467

Query: 306 IEPDIHVFSILAKGYVRAGEPQKA 329
           I P+     ++ +GY   G  + A
Sbjct: 468 IVPNEVTSQVVRRGYQDNGYLKSA 491



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 163/341 (47%), Gaps = 7/341 (2%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
           ++ G  P +     L+  L ++  F  +  L + +    + P  + +N +++AC   G+V
Sbjct: 143 LKVGAFPAVQACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDV 202

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
             A  +  +M   G +PT   Y TLI G  +  K  E+  + + M +D  V PN  TYN+
Sbjct: 203 LRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQM-KDSGVFPNLYTYNV 261

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+  +C   ++++A ++   M+  G+QP+ VT+  L  A  +  E   A +   +M    
Sbjct: 262 LMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFG 321

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           V PN      ++ GY K GN  +A   L  M++ ++ P++  ++ LIK    +   +  D
Sbjct: 322 VVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEAD 381

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI------FDDMVKAGIEPDIHVFS 314
             L  ME+ GV  + V +++++D +   G M K  EI      F DM + G+ PD   ++
Sbjct: 382 DILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYA 441

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           ++ +G++ A        +   M K G+ PN V    V  G+
Sbjct: 442 VMLQGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVVRRGY 482



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 124/255 (48%), Gaps = 7/255 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  + K  EA  +F  + + G  P L TY  L+    +    K  L L   +  DG++P+
Sbjct: 231 LCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPN 290

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + F  +I+A  +   +  A + F +M   G  P    +N+LI GY   G   E+  LL 
Sbjct: 291 VVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLL 350

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + K + P+  TY+IL++  C   ++EEA +++ +M   G+  ++V YN+L   Y + 
Sbjct: 351 EMEKFK-ISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKE 409

Query: 184 G------ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
           G      E ++A +   +M+ N +RP+     +++ G+    +M D M     M ++ + 
Sbjct: 410 GNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHADMIKMGIV 469

Query: 238 PNLVVFNSLIKGFLD 252
           PN V    + +G+ D
Sbjct: 470 PNEVTSQVVRRGYQD 484



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/322 (22%), Positives = 145/322 (45%), Gaps = 11/322 (3%)

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           +SQ +  K N   + +L+ A+     ++EA  V  K+   G  P     N L     +  
Sbjct: 109 LSQLRGSKFNPSVFGVLIIAFSEVGLVDEALRVYLKV---GAFPAVQACNALLNGLLKKS 165

Query: 185 ETYRAEQMLFEMQNNQVR----PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
               +  +++E+ NN V     P   T  ++V   C++G++  A   +  M +  + P +
Sbjct: 166 ----SFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTV 221

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V++ +LI G          +     M++ GV P++ T++ +MD +     + +   ++  
Sbjct: 222 VIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQG 281

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  G++P++  F IL     +  E   A      M K+GV PNVV+F ++I G+  A  
Sbjct: 282 MLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGN 341

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
              A  +  +M +  I+P++ TY  L+           A+++L+ ME++GV         
Sbjct: 342 CSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNS 401

Query: 421 VADSWRAIGLAREAKRVLKSAE 442
           + D +   G   +A  + K+ +
Sbjct: 402 LIDGYCKEGNMEKALEIFKATK 423



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 134/290 (46%), Gaps = 5/290 (1%)

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
           +N + ++  S   P    +  L  A+++ G    A ++  ++      P  + C  +++G
Sbjct: 106 FNALSQLRGSKFNPS--VFGVLIIAFSEVGLVDEALRVYLKVG---AFPAVQACNALLNG 160

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
             K+ + +        M    + P +V +N L+       D       ++ M + G++P 
Sbjct: 161 LLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPT 220

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           VV ++T++    S   + + + +F  M  +G+ P+++ +++L  GY +    ++A  +  
Sbjct: 221 VVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQ 280

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            M   G+ PNVV F  +I   C   ++  A   + +M + G+ PN+  + +L+ GY +A 
Sbjct: 281 GMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAG 340

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
               A +LL  ME+  + P   T  ++  +   +G   EA  +LK  E++
Sbjct: 341 NCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKE 390



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 112/220 (50%), Gaps = 7/220 (3%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A +++  ++++G +P ++T+  L+ AL + +   +      ++ K G+ P+ ++FN++I
Sbjct: 274 QALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLI 333

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +  S++GN  EA  +  +M+     P   TY+ LIK    +G  EE+  +L+ M ++  V
Sbjct: 334 DGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKE-GV 392

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNV------VYKMVASGIQPDAVTYNTLARAYAQYGE 185
             N   YN L+  +C + ++E+A  +         M  +G++PDA+ Y  + + +     
Sbjct: 393 PANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHLNAKH 452

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
                 +  +M    + PNE T  ++  GY   G ++ A+
Sbjct: 453 MADVMMLHADMIKMGIVPNEVTSQVVRRGYQDNGYLKSAL 492



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/217 (21%), Positives = 93/217 (42%), Gaps = 9/217 (4%)

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G K +   F  ++ A+S  GL+ +   ++   +K G  P +   + L  G ++       
Sbjct: 114 GSKFNPSVFGVLIIAFSEVGLVDEALRVY---LKVGAFPAVQACNALLNGLLKKSSFDIM 170

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             +  +M    + P VV +  ++   C    + RA S+  +M + GI P +  Y TL+ G
Sbjct: 171 WELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHG 230

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMP 449
                +   AE + + M++ GV P   T  ++ D +      ++A  + +   +D     
Sbjct: 231 LCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPN 290

Query: 450 NKKDEIAVESIHRKQNLSASNSTFLQ------IPGVV 480
                I ++++ + + L A+   F+Q      +P VV
Sbjct: 291 VVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVV 327


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 223/465 (47%), Gaps = 12/465 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT+ TY  L+    R +R    L +  ++ + G+ PD   +NA+I+  S+ G VD+A  +
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 175

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F KM++ G  P   TY++LI G     + +++ ++L+ M     V+PN+ TYN L+  + 
Sbjct: 176 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVG-AGVRPNNMTYNCLIHGYS 234

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           +    +E+  V  +M +S + PD    N+   A  ++G    A  +   M     +P+  
Sbjct: 235 TSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVI 294

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
           + G ++ GY   G +   M  L+ +   E V P+  VFN+LI  +  +     +DK+L +
Sbjct: 295 SYGALLHGYATAGCIA-GMDNLFNVMVCEGVVPDRHVFNTLINAYARLG---MMDKSLLM 350

Query: 266 MEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
            E+    GV PD++TFST++ A+   G +    E F+ M+  G+ PD  V+S L +G   
Sbjct: 351 FEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCN 410

Query: 323 AGEPQKAESILTSMRKYGVHPNVV-MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
             +  KA+ +++ M   G+ P  +  FT++I+  C   ++     + + +   G  PNL 
Sbjct: 411 RRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLI 470

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           T+ +L+ GY        A  LL  ME  GV P   T   + D +   G   +A  + +  
Sbjct: 471 TFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDM 530

Query: 442 EEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQI--PGVVSSEH 484
              R ++ +    I +  + + +    +   F ++   G+  S H
Sbjct: 531 LHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIH 575



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/438 (23%), Positives = 205/438 (46%), Gaps = 35/438 (7%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +P     +F  L+  G  P + +Y  L+   +++        L  K+E+ G+ P+ + ++
Sbjct: 133 RPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYS 192

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           ++IN   ++  +D+A ++ ++M  +G +P   TYN LI GY   G  +ES+++ + MS  
Sbjct: 193 SLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSS 252

Query: 129 ----------------------------------KNVKPNDRTYNILVRAWCSKNSIEEA 154
                                             K  KP+  +Y  L+  + +   I   
Sbjct: 253 LLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGM 312

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
            N+   MV  G+ PD   +NTL  AYA+ G   ++  M  +M    V P+  T   ++S 
Sbjct: 313 DNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISA 372

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           +C+ G ++DAM     M +  V P+  V++ LI+G  + +D     + ++ M   G+ P 
Sbjct: 373 FCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPP 432

Query: 275 VVTFST-IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
            + F T I++     G + + +++ D ++  G  P++  F+ L  GY   G  ++A  +L
Sbjct: 433 CIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLL 492

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
            SM   GV P++  + T++ G+C   ++  A++++  M    +     +Y  +L G  +A
Sbjct: 493 DSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQA 552

Query: 394 KQPWRAEELLQVMEEKGV 411
           ++   A+E+   M E G+
Sbjct: 553 RRTIVAKEMFHEMIESGM 570



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/417 (23%), Positives = 200/417 (47%), Gaps = 8/417 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L   G+  EA  IF+ ++ +G +P +I+Y  L+           + +L + +  +G+
Sbjct: 265 MTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGV 324

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD  +FN +INA +  G +D+++ +F+ M   G  P   T++T+I  +  +G+ +++++
Sbjct: 325 VPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAME 384

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT-LARA 179
               M  D  V P+   Y+ L++  C++  + +A  ++  M++ GI P  + + T +   
Sbjct: 385 KFNHMI-DTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINN 443

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G     + ++  + +   RPN  T   +V GYC  GNM++A+  L  M+ + V P+
Sbjct: 444 LCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPD 503

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           +  +N+L+ G+        +D ALTL  +     V    V+++ I+     A      +E
Sbjct: 504 IYTYNTLVDGYC---KHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKE 560

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F +M+++G+   IH ++ +  G  R     +A  +L  +    V  +++ F  VI    
Sbjct: 561 MFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMF 620

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
              + Q A  ++  +   G+ P + TY  ++    + +    A+ L   ME+    P
Sbjct: 621 KVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTP 677



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/423 (22%), Positives = 195/423 (46%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +FN ++ EG  P    + TL+ A  R       L +   + K G+ PD I F+ +I+A  
Sbjct: 315 LFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFC 374

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
             G +D+AM+ F  M D+G  P T+ Y+ LI+G  N     ++ +L+  M       P  
Sbjct: 375 RLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCI 434

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           + +  ++   C +  + E  +VV  ++ +G +P+ +T+N+L   Y   G    A  +L  
Sbjct: 435 KFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDS 494

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M++  V P+  T   +V GYCK G ++DA+     M    V    V +N ++ G    + 
Sbjct: 495 MESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARR 554

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
           +    +    M E G+   + T++T++          +   + + +    ++ DI  F+I
Sbjct: 555 TIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNI 614

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           + +   + G  Q+A+ +  ++  YG+ P ++ +  +I+        + A +++  M +  
Sbjct: 615 VIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSS 674

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
             P+ +    ++       +  +A   L  +++KG+ P+ +T  L+   +   G  RE  
Sbjct: 675 CTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYI 734

Query: 436 RVL 438
           ++L
Sbjct: 735 KLL 737



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 108/231 (46%)

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           +  P   T  I+++ Y +    +  +    R+    + P++  +N+LI GF    + D  
Sbjct: 113 EAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKA 172

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
                 MEE G+ P+VVT+S++++       M K + +   MV AG+ P+   ++ L  G
Sbjct: 173 HDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHG 232

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y  +G  +++  +   M    + P+V    + ++  C   +++ A  I++ M   G  P+
Sbjct: 233 YSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPD 292

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           + +Y  LL GY  A      + L  VM  +GV P +     + +++  +G+
Sbjct: 293 VISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGM 343



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 56/115 (48%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F  +   G  PT++TY  ++  L +++ F+   +L S +EK    PDS + 
Sbjct: 623 GRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRIL 682

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           N +I      G V +A     K+   G  P  +T + LI  +   GK  E +KLL
Sbjct: 683 NEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLL 737


>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
          Length = 950

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 205/413 (49%), Gaps = 42/413 (10%)

Query: 50  SLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY 109
           +L+ ++E++G+     +++ M++  +   +  + + +F+++K+ G  PT  TY  LI  Y
Sbjct: 433 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 492

Query: 110 GNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
             VGK  ++L++ ++M +++ VK N +TY++++  +        A+ V   MV  G++PD
Sbjct: 493 TKVGKISKALEVSRVM-KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 551

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
            + YN +  A+   G   RA Q + EMQ  + RP  RT   I+ GY K G+M  ++    
Sbjct: 552 VILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFD 611

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWS 286
            M+     P +  FN LI G ++ +    ++KA+ +++E    GV  +  T++ IM  ++
Sbjct: 612 MMRRCGCVPTVHTFNGLINGLVEKRQ---MEKAVEILDEMTLAGVSANEHTYTKIMQGYA 668

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDI-----------------------------------H 311
           S G  GK  E F  +   G++ DI                                    
Sbjct: 669 SVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 728

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
           V++IL  G+ R G+  +A  ++  M+K GV P++  +T+ IS    A  M RA    E+M
Sbjct: 729 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM 788

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             +G+ PN+KTY TL+ G+  A  P +A    + M+  G++P K+    +  S
Sbjct: 789 EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTS 841



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 198/388 (51%), Gaps = 7/388 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+    GK  +A  +   + EEG +  L TY+ ++    + K + +  ++   + K+GM
Sbjct: 489 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 548

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD IL+N +I+A    GN+D A++  ++M+    +PTT T+  +I GY   G    SL+
Sbjct: 549 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 608

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +  +M +   V P   T+N L+     K  +E+A  ++ +M  +G+  +  TY  + + Y
Sbjct: 609 VFDMMRRCGCV-PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 667

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A  G+T +A +    +QN  +  +  T   ++   CK G M+ A+     M    +  N 
Sbjct: 668 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 727

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            V+N LI G+    D       +  M++ GVKPD+ T+++ + A S AG M +  +  ++
Sbjct: 728 FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 787

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G++P+I  ++ L KG+ RA  P+KA S    M+  G+ P+  ++  +++   +   
Sbjct: 788 MEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRAS 847

Query: 361 MQRA------MSIYEKMCEIGINPNLKT 382
           +  A      M+I ++M E G+  ++ T
Sbjct: 848 IAEAYIYSGVMTICKEMVEAGLIVDMGT 875



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 179/393 (45%), Gaps = 5/393 (1%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
            E+  +P+   +  +V    R+           ++   G+ P S ++ ++I+A +   ++
Sbjct: 299 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDM 358

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP--NDRTY 138
           DEA+   +KMK+ G + +  TY+ ++ G+   G  E +        + K +    N   Y
Sbjct: 359 DEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFD---EAKRIHKTLNASIY 415

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
             ++ A C   ++E A  +V +M   GI      Y+T+   Y    +  +   +   ++ 
Sbjct: 416 GKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKE 475

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
               P   T G +++ Y K G +  A+     MKE  V  NL  ++ +I GF+ +KD   
Sbjct: 476 CGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWAN 535

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
                  M + G+KPDV+ ++ I+ A+   G M +  +   +M K    P    F  +  
Sbjct: 536 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIH 595

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           GY ++G+ +++  +   MR+ G  P V  F  +I+G     +M++A+ I ++M   G++ 
Sbjct: 596 GYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA 655

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           N  TY  ++ GY       +A E    ++ +G+
Sbjct: 656 NEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 688



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 157/323 (48%), Gaps = 1/323 (0%)

Query: 96  KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
           KP+ + +  ++K YG  G    + +  + M + + + P  R Y  L+ A+     ++EA 
Sbjct: 304 KPSRTEFGLMVKFYGRRGDMHRARETFERM-RARGITPTSRIYTSLIHAYAVGRDMDEAL 362

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
           + V KM   GI+   VTY+ +   +++ G    A+    E +      N    G I+  +
Sbjct: 363 SCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAH 422

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C+  NME A   +  M+E  +   + ++++++ G+  + D          ++E G  P V
Sbjct: 423 CQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTV 482

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           VT+  +++ ++  G + K  E+   M + G++ ++  +S++  G+V+  +   A ++   
Sbjct: 483 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 542

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M K G+ P+V+++  +IS +C    M RA+   ++M ++   P  +T+  ++ GY ++  
Sbjct: 543 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 602

Query: 396 PWRAEELLQVMEEKGVRPKKSTI 418
             R+ E+  +M   G  P   T 
Sbjct: 603 MRRSLEVFDMMRRCGCVPTVHTF 625



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 52/259 (20%), Positives = 116/259 (44%)

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
           W  V        +P    +  + + Y + G+ +RA +    M+   + P  R    ++  
Sbjct: 292 WQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHA 351

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           Y    +M++A+  + +MKE  +  +LV ++ ++ GF     ++  D      +      +
Sbjct: 352 YAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLN 411

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
              +  I+ A      M + + +  +M + GI+  I ++  +  GY    + +K   +  
Sbjct: 412 ASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFK 471

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            +++ G  P VV +  +I+ +    K+ +A+ +   M E G+  NLKTY  ++ G+ + K
Sbjct: 472 RLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLK 531

Query: 395 QPWRAEELLQVMEEKGVRP 413
               A  + + M ++G++P
Sbjct: 532 DWANAFAVFEDMVKEGMKP 550



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 56/268 (20%), Positives = 110/268 (41%), Gaps = 41/268 (15%)

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           +L R     G+ ++A    FE  +   +P+    G++V  Y + G+M  A     RM+  
Sbjct: 280 SLQRILDTNGDNWQAVISAFEKIS---KPSRTEFGLMVKFYGRRGDMHRARETFERMRAR 336

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            + P   ++ SLI  +   +D   +D+AL+ + +                          
Sbjct: 337 GITPTSRIYTSLIHAYAVGRD---MDEALSCVRK-------------------------- 367

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
                 M + GIE  +  +S++  G+ +AG  + A+      ++     N  ++  +I  
Sbjct: 368 ------MKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYA 421

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C    M+RA ++  +M E GI+  +  Y T++ GY       +   + + ++E G  P 
Sbjct: 422 HCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPT 481

Query: 415 KSTIQLVADSWRAIG---LAREAKRVLK 439
             T   + + +  +G    A E  RV+K
Sbjct: 482 VVTYGCLINLYTKVGKISKALEVSRVMK 509



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 78/172 (45%)

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           KP    F  ++  +   G M + +E F+ M   GI P   +++ L   Y    +  +A S
Sbjct: 304 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 363

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
            +  M++ G+  ++V ++ ++ G+  A   + A   +++   I    N   Y  +++ + 
Sbjct: 364 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 423

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           +     RAE L++ MEE+G+    +    + D +  +   ++   V K  +E
Sbjct: 424 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKE 475


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 222/443 (50%), Gaps = 9/443 (2%)

Query: 4   LVGKGKPH--EAHYIFNCLIEEGH---RPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           L  +G  H  +A  +   +  E H   RP  ++YTT++  L   +R    ++L+  ++  
Sbjct: 93  LCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQAS 152

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G++ D + +  +I    ++  +D A+++  +M  SG +P    Y+ L++GY   G+ ++ 
Sbjct: 153 GVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDV 212

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
            K+ + MS+ + +KP+   +  L+   C +    +A  V   MV  G++P+ VTYN L  
Sbjct: 213 GKVFEDMSR-RGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLIN 271

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE--V 236
           +  + G    A  +  EM +  V P+  T   +++G      M++AM FL  M + +  V
Sbjct: 272 SLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVV 331

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P++V FNS+I G   I       K   +M E G   ++VT++ ++  +     +     
Sbjct: 332 EPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMN 391

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           + D++  +G+EPD   +SIL  G+ +  E  +AE  L +MR+ G+   +  +  +++  C
Sbjct: 392 LMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMC 451

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
               M+RAM ++ +M +     +   Y T++ G  ++      ++L+Q M ++G+ P   
Sbjct: 452 QQGMMERAMGLFNEM-DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAV 510

Query: 417 TIQLVADSWRAIGLAREAKRVLK 439
           T  ++ + +  +G   EA+RVLK
Sbjct: 511 TYSMLINMYAKLGDLEEAERVLK 533



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 209/450 (46%), Gaps = 13/450 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L    +  EA  +   +   G R  ++TY TL+  L       + L L+ ++   G+
Sbjct: 130 MRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGV 189

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ ++++ ++     SG   +  K+F+ M   G KP    +  LI      GK  ++ K
Sbjct: 190 QPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAK 249

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +  +M Q + ++PN  TYN+L+ + C + S+ EA  +  +M   G+ PD VTYNTL    
Sbjct: 250 VKDMMVQ-RGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGL 308

Query: 181 AQYGETYRAEQMLFEM--QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           +   E   A   L EM   +  V P+  T   ++ G CK G M  A++    M E     
Sbjct: 309 SGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMC 368

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           NLV +N LI GFL +     V  A+ LM+E    G++PD  T+S +++ +S    + + +
Sbjct: 369 NLVTYNYLIGGFLRVHK---VKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAE 425

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           +    M + GI+ ++  +  L     + G  ++A  +   M K     + + ++T+I G 
Sbjct: 426 KFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDK-NCGLDAIAYSTMIHGA 484

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C +  M+    + + M + G+ P+  TY  L+  Y +      AE +L+ M   G  P  
Sbjct: 485 CKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDV 544

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEEDR 445
           +    +   + A G   +  +VLK   E R
Sbjct: 545 AVFDSLIKGYSAEG---QTDKVLKLIHEMR 571



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 184/351 (52%), Gaps = 4/351 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  +A  + + +++ G  P ++TY  L+ +L ++   +  L+L  +++  G+ PD
Sbjct: 238 LCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPD 297

Query: 64  SILFNAMINACSESGNVDEAMKIFQKM--KDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
            + +N +I   S    +DEAM   ++M   D+  +P   T+N++I G   +G+  +++K+
Sbjct: 298 VVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKV 357

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
            ++M++ +    N  TYN L+  +   + ++ A N++ ++  SG++PD+ TY+ L   ++
Sbjct: 358 REMMAE-RGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFS 416

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           +  E  RAE+ L  M+   ++        +++  C++G ME AM     M +     + +
Sbjct: 417 KMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDK-NCGLDAI 475

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            ++++I G     D   V + +  M + G+ PD VT+S +++ ++  G + + + +   M
Sbjct: 476 AYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQM 535

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
             +G  PD+ VF  L KGY   G+  K   ++  MR   V  +  + +T+I
Sbjct: 536 TASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 188/391 (48%), Gaps = 6/391 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +P ++ Y+ L+    R  R++ +  +   + + G+KPD I+F  +I+   + G   +A
Sbjct: 188 GVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKA 247

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            K+   M   G +P   TYN LI      G   E+L L + M  DK V P+  TYN L+ 
Sbjct: 248 AKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEM-DDKGVAPDVVTYNTLIA 306

Query: 144 AWCSKNSIEEAWNVVYKMVASG--IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
                  ++EA + + +M+     ++PD VT+N++     + G   +A ++   M     
Sbjct: 307 GLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGC 366

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
             N  T   ++ G+ +   ++ AM  +  +    + P+   ++ LI GF  + + D  +K
Sbjct: 367 MCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEK 426

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK-AGIEPDIHVFSILAKGY 320
            L  M + G+K ++  +  ++ A    G+M +   +F++M K  G+  D   +S +  G 
Sbjct: 427 FLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGL--DAIAYSTMIHGA 484

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            ++G+ +  + ++  M   G+ P+ V ++ +I+ +     ++ A  + ++M   G  P++
Sbjct: 485 CKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDV 544

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
             +++L+ GY    Q  +  +L+  M  K V
Sbjct: 545 AVFDSLIKGYSAEGQTDKVLKLIHEMRAKNV 575



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 168/363 (46%), Gaps = 9/363 (2%)

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE--ESLKLLQLMS 126
           A++N       V EA  +   + D        +YNT++      G     ++  LL  MS
Sbjct: 56  ALLNRRLRGAPVTEACSLLSALPDV---RDAVSYNTVLAALCRRGGDHLRQARSLLVDMS 112

Query: 127 QDKN--VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           ++ +   +PN  +Y  ++R  C+     EA  ++  M ASG++ D VTY TL R      
Sbjct: 113 REAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDAS 172

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           E   A ++L EM  + V+PN      ++ GYC+ G  +D  +    M    + P++++F 
Sbjct: 173 ELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFT 232

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            LI        +    K   +M + G++P+VVT++ ++++    G + +   +  +M   
Sbjct: 233 GLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDK 292

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG--VHPNVVMFTTVISGWCNAVKMQ 362
           G+ PD+  ++ L  G     E  +A S L  M +    V P+VV F +VI G C   +M 
Sbjct: 293 GVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMT 352

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
           +A+ + E M E G   NL TY  L+ G+    +   A  L+  +   G+ P   T  ++ 
Sbjct: 353 QAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILI 412

Query: 423 DSW 425
           + +
Sbjct: 413 NGF 415



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 114/241 (47%), Gaps = 2/241 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A  +   + E G    L+TY  L+    R  + K  ++L+ ++   G++PDS  +
Sbjct: 349 GRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTY 408

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +IN  S+   VD A K    M+  G K     Y  L+      G  E ++ L   M  
Sbjct: 409 SILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEM-- 466

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           DKN   +   Y+ ++   C    ++    ++  M+  G+ PDAVTY+ L   YA+ G+  
Sbjct: 467 DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLE 526

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            AE++L +M  +   P+      ++ GY  EG  +  ++ ++ M+   V  +  + +++I
Sbjct: 527 EAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586

Query: 248 K 248
           +
Sbjct: 587 R 587



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 89/179 (49%), Gaps = 1/179 (0%)

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           +P+ V+++T+M    ++   G+   +   M  +G+  D+  +  L +G   A E   A  
Sbjct: 120 RPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALE 179

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +L  M   GV PNVV+++ ++ G+C + + Q    ++E M   GI P++  +  L+    
Sbjct: 180 LLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLC 239

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           +  +  +A ++  +M ++G+ P   T  ++ +S    G  REA   L+   +D+   P+
Sbjct: 240 KEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREAL-TLRKEMDDKGVAPD 297


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 223/473 (47%), Gaps = 74/473 (15%)

Query: 12  EAHYIFNCLIEEGH-RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           EA  +F  + + G  RP L+TY+ L+    +       L L+ ++E++G+K D  +++++
Sbjct: 167 EARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSL 226

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK---------------- 114
           I+A    G+++   ++F +M      P   TY+ L++G G  G+                
Sbjct: 227 ISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGV 286

Query: 115 -PE------------------ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
            P+                  +++K+L LM Q K  +P   TYN++V   C ++ +++A+
Sbjct: 287 RPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQ-KGEEPGTLTYNVVVNGLCKEDRMDDAF 345

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM--LFEMQNNQVRPNERTCGIIVS 213
            VV  MV  G +PDAVTYNTL +     G+ + A  +  L   +   V+P+  TC  ++ 
Sbjct: 346 GVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQ 405

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS----------------- 256
           G CKEG + DA R    M E+ +  N+V +N LI+G+L  +                   
Sbjct: 406 GLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSP 465

Query: 257 ---------DGVDKALTL---------MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
                    +G+ K   L         M++ G++P V+ ++ +M +      + + + +F
Sbjct: 466 NSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLF 525

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
            +M       D+  F+I+  G ++AG+ + A+ +L+ M    + P+ V F+ +I+ +   
Sbjct: 526 QEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKL 585

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
             +  AM +YEKM   G  P +  +++LL GYG   +  +   LL  M +K V
Sbjct: 586 GMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDV 638



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 195/425 (45%), Gaps = 9/425 (2%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG-MKPDSILFNAMINACS 75
           ++C++     P  +TY TLV    + KR      L   ++K G  +P+ + ++ +I+   
Sbjct: 142 YDCVV-----PDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYC 196

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           +SG V E + + ++M+  G K     Y++LI  +   G  E   +L   M + K V PN 
Sbjct: 197 KSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRK-VSPNV 255

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY+ L++         EA  ++  M A G++PD V Y  LA    + G    A ++L  
Sbjct: 256 VTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDL 315

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI-K 254
           M      P   T  ++V+G CKE  M+DA   +  M +    P+ V +N+L+KG     K
Sbjct: 316 MVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGK 375

Query: 255 DSDGVDK-ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
             + +D   L L E+F VKPDV T + ++      G +     I   MV+ G++ +I  +
Sbjct: 376 IHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTY 435

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           + L +GY+ A +  +A  +     + G  PN + ++ +I+G C    +  A  ++ KM +
Sbjct: 436 NFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKD 495

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
            GI P +  Y  L+          +A  L Q M          +  ++ D     G  + 
Sbjct: 496 SGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKS 555

Query: 434 AKRVL 438
           AK +L
Sbjct: 556 AKELL 560



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 206/464 (44%), Gaps = 9/464 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   + + L  +           S++S + K G   +    N ++     SG  D+AM +
Sbjct: 75  PRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSL 134

Query: 87  FQKMK-DSGCK-PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
           F +MK +  C  P   TYNTL+ G+    +  E+  L + M +  + +PN  TY++L+  
Sbjct: 135 FSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDC 194

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +C    + E   ++ +M   G++ D   Y++L  A+   G+     ++  EM   +V PN
Sbjct: 195 YCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPN 254

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   ++ G  + G   +A   L  M    V P++V +  L  G      +    K L 
Sbjct: 255 VVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLD 314

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
           LM + G +P  +T++ +++       M     + + MVK G +PD   ++ L KG   AG
Sbjct: 315 LMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAG 374

Query: 325 EPQKAESI--LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           +  +A  +  L    K+ V P+V     +I G C   ++  A  I+  M E+G+  N+ T
Sbjct: 375 KIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVT 434

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           Y  L+ GY  A++   A +L +   E G  P   T  ++ +    + +   A R L    
Sbjct: 435 YNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVA-RGLFCKM 493

Query: 443 EDRQSMPNKKDEIAV-ESIHRKQNLSASNSTFLQIPGVVSSEHN 485
           +D    P   D  A+  S+ R+ +L  + S F ++  V    HN
Sbjct: 494 KDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNV---NHN 534



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/414 (24%), Positives = 195/414 (47%), Gaps = 7/414 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +   +   G RP ++ YT L   L +  R    + ++  + + G +P ++ +
Sbjct: 269 GRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTY 328

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++N   +   +D+A  + + M   G KP   TYNTL+KG    GK  E++ L +L+  
Sbjct: 329 NVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLS 388

Query: 128 DK-NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +K +VKP+  T N L++  C +  + +A  +   MV  G+Q + VTYN L   Y    + 
Sbjct: 389 EKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKL 448

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++      +   PN  T  ++++G CK   +  A     +MK+  + P ++ +N+L
Sbjct: 449 IEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNAL 508

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           +         D +++A +L +E        DVV+F+ I+D    AG +   +E+  +M  
Sbjct: 509 MTSLCR---EDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFM 565

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
             + PD   FSIL   + + G   +A  +   M   G  P VV+F +++ G+    + ++
Sbjct: 566 MDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEK 625

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            +S+  +M +  +  + K   T+L       +    E++L    ++     K T
Sbjct: 626 IISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKILPKFSQQSEHTSKGT 679



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 165/369 (44%), Gaps = 41/369 (11%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSL--ISKVEKD 58
           +N L  + +  +A  +   ++++G +P  +TY TL+  L    +    + L  +   EK 
Sbjct: 332 VNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKF 391

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
            +KPD    N +I    + G V +A +I   M + G +    TYN LI+GY    K  E+
Sbjct: 392 HVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEA 451

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           LKL +  + +    PN  TY++++   C    +  A  +  KM  SGI+P  + YN L  
Sbjct: 452 LKLWKY-AVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNAL-- 508

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
                                            ++  C+E ++E A      M+ +  + 
Sbjct: 509 ---------------------------------MTSLCREDSLEQARSLFQEMRNVNHNV 535

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           ++V FN +I G L   D     + L+ M    + PD VTFS +++ +S  G++ +   ++
Sbjct: 536 DVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLY 595

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           + MV  G  P + VF  L KGY   GE +K  S+L  M    V  +  + +T+++  C+ 
Sbjct: 596 EKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCH- 654

Query: 359 VKMQRAMSI 367
             M R + +
Sbjct: 655 --MSRNLDV 661



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/348 (22%), Positives = 146/348 (41%), Gaps = 38/348 (10%)

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           +  D    P++   + L+         +   +V +KMV++ + P   + + L  ++    
Sbjct: 32  IDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTH 91

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE--VHPNLVV 242
               A  +L  M       N     +++ G+C+ G  + AM    +MK     V P+ V 
Sbjct: 92  HPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVT 151

Query: 243 FNSLIKGFLDIK---------------------------------DSDGVDKALTLMEEF 269
           +N+L+ GF   K                                  S  V + L L+EE 
Sbjct: 152 YNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEM 211

Query: 270 ---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              G+K DV  +S+++ A+   G +   +E+FD+M++  + P++  +S L +G  R G  
Sbjct: 212 EREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRW 271

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           ++A  +L  M   GV P+VV +T +  G C   +   A+ + + M + G  P   TY  +
Sbjct: 272 REASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVV 331

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           + G  +  +   A  ++++M +KG +P   T   +       G   EA
Sbjct: 332 VNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEA 379



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 9/172 (5%)

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           ST++D    A        ++  MV A + P     S L + +V    P  A S+L+ M K
Sbjct: 46  STLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTK 105

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM-----CEIGINPNLKTYETLLWGYGEA 393
            G   NV     V+ G+C + +  +AMS++ +M     C +   P+  TY TL+ G+ +A
Sbjct: 106 RGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVV---PDCVTYNTLVNGFCKA 162

Query: 394 KQPWRAEELLQVMEEKG-VRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           K+   A  L + M++ G  RP   T  ++ D +   G   E   +L+  E +
Sbjct: 163 KRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMERE 214


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 201/432 (46%), Gaps = 38/432 (8%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +FNCL+ +   P  I +  ++ +L + K + ++L L  K+E  G+KP+ +  N +I
Sbjct: 70  DAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILI 129

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N   + G +  A  +F K+   G  P T T+ T                           
Sbjct: 130 NCFCQLGLIPFAFSVFAKILKMGYNPNTITFTT--------------------------- 162

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
                    L++  C K  I +A N   K+VA G Q + ++Y TL     + GET  A  
Sbjct: 163 ---------LIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALD 213

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L  +    V+PN      I+ G CK+ ++ DA      M    + PN+V +++LI GF 
Sbjct: 214 LLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFF 273

Query: 252 DI-KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
            + K  D VD    ++ E  +KPDV TF+ ++D +  +G +    ++ D+M   G  P+I
Sbjct: 274 TVGKLKDAVDLFNKMISE-NIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNI 332

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             +S +     +     KA ++LT ++  G+ PN+  +T +I G C + K++ A +I+E 
Sbjct: 333 VTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFED 392

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           +   G +  + TY  + +G+ +      A  LL  MEE G  P   T +L+  S    G 
Sbjct: 393 LLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGE 452

Query: 431 AREAKRVLKSAE 442
              A+++ +  E
Sbjct: 453 NDMAEKLHRECE 464



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 140/278 (50%), Gaps = 1/278 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  KG+ H+A    + L+  G +   I+Y TL+  L +    ++ L L+ +V+   ++P+
Sbjct: 167 LCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPN 226

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            ++++ +I+   +  +V++A  ++ +M   G  P   TY+ LI G+  VGK ++++ L  
Sbjct: 227 VVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFN 286

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  + N+KP+  T+NILV  +C    I  A  +V +M   G  P+ VTY+++  A  + 
Sbjct: 287 KMISE-NIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKT 345

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
               +A  +L ++++  +RPN  T  I++ G C  G +EDA      +        +V +
Sbjct: 346 HRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTY 405

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
             +  GF      D     L+ MEE G  PD  T+  I
Sbjct: 406 IVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELI 443



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 117/224 (52%), Gaps = 2/224 (0%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           ++A  +++ ++ +G  P ++TY+ L++      + K  + L +K+  + +KPD   FN +
Sbjct: 244 NDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNIL 303

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           ++   +SG +  A+K+  +M D G  P   TY++++       + ++++ LL  + +D+ 
Sbjct: 304 VDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKL-KDQG 362

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           ++PN  TY IL+   C+   +E+A N+   ++  G     VTY  +   + + G    A 
Sbjct: 363 IRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEAS 422

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
            +L +M+ N   P+ +T  +I     K+G  + A + L+R  E+
Sbjct: 423 ALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEK-LHRECEI 465



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 7/188 (3%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  +FN +I E  +P + T+  LV    +  +    L L+ ++   G  P+ + +
Sbjct: 276 GKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTY 335

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +++++A  ++  VD+A+ +  K+KD G +P   TY  LI G    GK E++  +     +
Sbjct: 336 SSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIF----E 391

Query: 128 DKNVKPND---RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           D  VK  D    TY ++   +C K   +EA  ++ KM  +G  PDA TY  +  +  + G
Sbjct: 392 DLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKG 451

Query: 185 ETYRAEQM 192
           E   AE++
Sbjct: 452 ENDMAEKL 459



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 108/266 (40%), Gaps = 36/266 (13%)

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
           +++DA+     +      P  + FN ++   +  K    V      ME  G+KP++V  +
Sbjct: 67  DVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCN 126

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK--------------------- 318
            +++ +   GL+     +F  ++K G  P+   F+ L K                     
Sbjct: 127 ILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVAL 186

Query: 319 --------------GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
                         G  + GE + A  +L  +    V PNVVM++T+I G C    +  A
Sbjct: 187 GFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDA 246

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             +Y +M   GI+PN+ TY  L+ G+    +   A +L   M  + ++P   T  ++ D 
Sbjct: 247 FDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDV 306

Query: 425 WRAIGLAREAKRVLKSAEEDRQSMPN 450
           +   G    A +++     DR   PN
Sbjct: 307 FCKSGKISYALKLVDEM-HDRGQPPN 331



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 75/141 (53%), Gaps = 1/141 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++    GK   A  + + + + G  P ++TY++++ AL +  R    ++L++K++  G+
Sbjct: 304 VDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGI 363

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+   +  +I+    SG +++A  IF+ +   G   T  TY  +  G+   G  +E+  
Sbjct: 364 RPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASA 423

Query: 121 LLQLMSQDKNVKPNDRTYNIL 141
           LL  M ++  + P+ +TY ++
Sbjct: 424 LLSKMEENGCI-PDAKTYELI 443



 Score = 38.9 bits (89), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 43/83 (51%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK  +A  IF  L+ +G+  T++TY  +     ++  F    +L+SK+E++G  PD
Sbjct: 377 LCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPD 436

Query: 64  SILFNAMINACSESGNVDEAMKI 86
           +  +  +  +  + G  D A K+
Sbjct: 437 AKTYELIKLSLFKKGENDMAEKL 459


>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 214/429 (49%), Gaps = 11/429 (2%)

Query: 1   MNILVGKGKPHEAHYIFN-CLIEEGHRPTLITYTTLVAALTRQKR---FKSILSLISKVE 56
           + +L+   + H AH+ +   +I  G      TY+  ++AL           I SL+  ++
Sbjct: 52  IGVLLRHSRLHLAHHYYRRHVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMD 111

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
             G  PD   FN  +N       ++ A+++F  M   G  P   +Y  +I    N  + +
Sbjct: 112 SLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFD 171

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           E+ K+ + +  DK + P+ +    LV   CS   ++ A+ +V  ++  G++ +++ YN L
Sbjct: 172 EAAKVWRRLI-DKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNAL 230

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
              + + G   +A ++   M      P+  T  I+++  C+EG +++A+R +  M+   V
Sbjct: 231 IDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGV 290

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKA-LTLMEEFGVKP--DVVTFSTIMDAWSSAGLMGK 293
            P+L  +N L+KGF     ++ VD+A L ++E    K   DVV+++T++ A+  A    K
Sbjct: 291 EPDLYSYNELLKGFCK---ANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRK 347

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
             E+F++M   GI PD+  F+IL   ++R G     + +L  M K  V P+ + +T V+ 
Sbjct: 348 GYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVD 407

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             C   K+  A S++  M E G+NP++ +Y  LL G+ +  +   A  L   M+ KG+ P
Sbjct: 408 HLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYP 467

Query: 414 KKSTIQLVA 422
            + T +L+ 
Sbjct: 468 DEVTYKLIV 476



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 184/387 (47%), Gaps = 1/387 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+L  + +   A  +F+ +  +G  P +++YT ++ AL   KRF     +  ++   G+
Sbjct: 126 LNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGL 185

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD     A++      G VD A ++   +   G K  +  YN LI G+  +G+ ++++K
Sbjct: 186 SPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMK 245

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   MS+   V P+  TYNIL+   C +  ++EA  +V  M  SG++PD  +YN L + +
Sbjct: 246 IKAFMSRTGCV-PDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGF 304

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +     RA  M+ E    +   +  +   +++ +CK             M    + P++
Sbjct: 305 CKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDM 364

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V FN LI  FL    +  V K L  M +  V PD + ++ ++D     G +     +F D
Sbjct: 365 VTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRD 424

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ G+ PD+  ++ L  G+ +      A  +   M+  G++P+ V +  ++ G     K
Sbjct: 425 MVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKK 484

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLL 387
           +  A  ++++M E G   N    ETL+
Sbjct: 485 ISLACRVWDQMMERGFTLNRHLSETLV 511



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 192/390 (49%), Gaps = 7/390 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P +  + T +  L RQ R ++ L L   +   G  PD + +  +I+A   +   DEA
Sbjct: 114 GFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEA 173

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            K+++++ D G  P       L+ G  + G+ + + +L+  + +   VK N   YN L+ 
Sbjct: 174 AKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIK-GGVKVNSLVYNALID 232

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +C    +++A  +   M  +G  PD VTYN L     + G    A +++  M+ + V P
Sbjct: 233 GFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEP 292

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  +   ++ G+CK   ++ A   +    + +   ++V +N++I  F   + +    K  
Sbjct: 293 DLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTR---KGY 349

Query: 264 TLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
            L EE    G++PD+VTF+ ++DA+   G     +++ D+M K  + PD   ++ +    
Sbjct: 350 ELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHL 409

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            + G+   A S+   M + GV+P+V+ +  +++G+C   ++  AM ++++M   G+ P+ 
Sbjct: 410 CKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDE 469

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
            TY+ ++ G    K+   A  +   M E+G
Sbjct: 470 VTYKLIVGGLIRGKKISLACRVWDQMMERG 499



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 167/343 (48%), Gaps = 1/343 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  ++  LI++G  P       LV  L    R      L+  V K G+K +S+++NA+I
Sbjct: 172 EAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALI 231

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +     G VD+AMKI   M  +GC P   TYN L+      G  +E+++L++ M +   V
Sbjct: 232 DGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMER-SGV 290

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +P+  +YN L++ +C  N ++ A  ++ + + +    D V+YNT+  A+ +   T +  +
Sbjct: 291 EPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYE 350

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  EM    +RP+  T  I++  + +EG+     + L  M ++ V P+ + + +++    
Sbjct: 351 LFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLC 410

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                D        M E GV PDV++++ +++ +     +     +FD+M   G+ PD  
Sbjct: 411 KNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEV 470

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
            + ++  G +R  +   A  +   M + G   N  +  T+++ 
Sbjct: 471 TYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNA 513



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/418 (21%), Positives = 179/418 (42%), Gaps = 42/418 (10%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLI-------------------- 106
           + + I+   ++G +++A+ +F +M +S C+  +  YN  I                    
Sbjct: 13  YRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHV 72

Query: 107 --KGYG------------------NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +G+                   N+  P     LL + S      P+   +N  +   C
Sbjct: 73  IPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSL--GFVPDIWAFNTYLNLLC 130

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            +N +E A  + + M + G  PD V+Y  +  A         A ++   + +  + P+ +
Sbjct: 131 RQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYK 190

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
            C  +V G C  G ++ A   +  + +  V  N +V+N+LI GF  +   D   K    M
Sbjct: 191 ACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFM 250

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              G  PD+VT++ +++     G++ +   + + M ++G+EPD++ ++ L KG+ +A   
Sbjct: 251 SRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMV 310

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +A  ++    +     +VV + TVI+ +C A + ++   ++E+MC  GI P++ T+  L
Sbjct: 311 DRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNIL 370

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           +  +         ++LL  M +  V P       V D     G    A  V +   E+
Sbjct: 371 IDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVEN 428


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 213/420 (50%), Gaps = 6/420 (1%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  + +    P++I ++ L++A+ +  +F  ++S   K+E  G+  +   +N +IN   
Sbjct: 65  LFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFC 124

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
               +  A+ +  KM   G +P   T N+L+ G+ +  +  +++ L+  M +    KP+ 
Sbjct: 125 RCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVE-MGYKPDT 183

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            T+  L+      N   EA  ++ +MV  G QPD VTY  +     + G+T  A  +L +
Sbjct: 184 VTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNK 243

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M+  ++  N      ++   CK  + +DA+     M+   V PN++ ++SLI    +   
Sbjct: 244 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGR 303

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
                + L+ M E  + P++VTFS ++DA+   G + K ++++++M+K  I+P+I  +S 
Sbjct: 304 WSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSS 363

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  G+       +A+ +L  M +    PNVV + T+I+G+C A ++ + M ++ +M + G
Sbjct: 364 LINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG 423

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           +  N  TY TL+ G+ +A+    A+ + + M   GV P   T  ++ D     GL +  K
Sbjct: 424 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD-----GLCKNGK 478



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 205/413 (49%), Gaps = 7/413 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G    L TY  L+    R  R    L+L+ K+ K G +PD +  N+++N       + +A
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +  +M + G KP T T+ TLI G     K  E++ L+  M Q +  +P+  TY  +V 
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQ-RGCQPDLVTYGAVVN 226

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C +   + A N++ KM A+ I+ + V Y+T+  +  +Y     A  +  EM+N  VRP
Sbjct: 227 GLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 286

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  T   ++S  C  G   DA R L  M E +++PNLV F++LI  F+        +K  
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M +  + P++ T+S++++ +     +G+ +++ + M++    P++  ++ L  G+ +A
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKA 406

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
               K   +   M + G+  N V +TT+I G+  A     A  ++++M  +G++PN+ TY
Sbjct: 407 KRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 466

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV------ADSWRAIGL 430
             LL G  +  +  +A  + + ++   + P   T  ++      A  W+  G+
Sbjct: 467 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGI 519



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 169/317 (53%), Gaps = 1/317 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  + + +++ G +P L+TY  +V  L ++      L+L++K+E   ++ + ++++
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I++  +  + D+A+ +F +M++ G +P   TY++LI    N G+  ++ +LL  M + 
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K + PN  T++ L+ A+  K  + +A  +  +M+   I P+  TY++L   +        
Sbjct: 318 K-INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A+QML  M      PN  T   +++G+CK   ++  M     M +  +  N V + +LI 
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           GF   +D D        M   GV P+++T++ ++D     G + K   +F+ + ++ +EP
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496

Query: 309 DIHVFSILAKGYVRAGE 325
           DI+ ++I+ +G  +AG+
Sbjct: 497 DIYTYNIMIEGMCKAGK 513



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 164/361 (45%), Gaps = 38/361 (10%)

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D+A+ +F  M  S   P+   ++ L+     + K +  +   + M +   +  N  TYN
Sbjct: 59  LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKM-EILGISHNLYTYN 117

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           IL+  +C  + +  A  ++ KM+  G +PD VT N+L                       
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSL----------------------- 154

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG-FLDIKDSDG 258
                       ++G+C    + DA+  + +M E+   P+ V F +LI G FL  K S+ 
Sbjct: 155 ------------LNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
           V   +  M + G +PD+VT+  +++     G       + + M  A IE ++ ++S +  
Sbjct: 203 V-ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVID 261

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
              +      A ++ T M   GV PNV+ ++++IS  CN  +   A  +   M E  INP
Sbjct: 262 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINP 321

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           NL T+  L+  + +  +  +AE+L + M ++ + P   T   + + +  +    EAK++L
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML 381

Query: 439 K 439
           +
Sbjct: 382 E 382



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 108/219 (49%), Gaps = 1/219 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  +A  + + +IE    P L+T++ L+ A  ++ +      L  ++ K  +
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 354

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   ++++IN       + EA ++ + M    C P   TYNTLI G+    + ++ ++
Sbjct: 355 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + MSQ + +  N  TY  L+  +      + A  V  +MV+ G+ P+ +TYN L    
Sbjct: 415 LFREMSQ-RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 473

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEG 219
            + G+  +A  +   +Q + + P+  T  I++ G CK G
Sbjct: 474 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 1/240 (0%)

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++S   K    +  + F  +M+ L +  NL  +N LI  F            L  M + G
Sbjct: 84  LLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLG 143

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
            +PD+VT +++++ +     +     + D MV+ G +PD   F+ L  G     +  +A 
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           +++  M + G  P++V +  V++G C       A+++  KM    I  N+  Y T++   
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            + +    A  L   ME KGVRP   T   +       G   +A R+L    E R+  PN
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE-RKINPN 322


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 193/374 (51%), Gaps = 1/374 (0%)

Query: 49  LSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
             L+ ++ + G  P+ +++  +I+ C + G +++A  +F +M   G      TY  LI G
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG 242

Query: 109 YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP 168
               G  ++  ++ + M Q+  V PN  TYN ++   C     ++A+ V  +M   G+  
Sbjct: 243 LFKNGIKKQGFEMYEKM-QEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSC 301

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           + VTYNTL     +  +   A +++ +M+++ + PN  T   ++ G+C    +  A+   
Sbjct: 302 NIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLC 361

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
             +K   + P+LV +N L+ GF    D+ G  K +  MEE G+KP  VT++ ++D ++ +
Sbjct: 362 RDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARS 421

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
             M K  ++   M + G+ PD+H +S+L  G+   G   +A  +  SM +    PN V++
Sbjct: 422 DNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIY 481

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
            T++ G+C      RA+ ++ +M E  + PN+ +Y  ++    + ++   AE L++ M +
Sbjct: 482 NTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMID 541

Query: 409 KGVRPKKSTIQLVA 422
            G+ P  S + L++
Sbjct: 542 SGIGPSDSILNLIS 555



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/444 (24%), Positives = 207/444 (46%), Gaps = 37/444 (8%)

Query: 42  QKRFKSILSLISKV-EKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS 100
           Q +F +  SL+  + E +  K  S L+  +INA  +S ++D ++  F +M D G  P ++
Sbjct: 71  QSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSN 130

Query: 101 TYNTL----------------------------------IKGYGNVGKPEESLKLLQLMS 126
            +N L                                  IKG    G+ E+S  LL  + 
Sbjct: 131 CFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVEL- 189

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++    PN   Y  L+   C K  IE+A ++ ++M   G+  +  TY  L     + G  
Sbjct: 190 REFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIK 249

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +  +M  +MQ + V PN  T   +++  CK+G  +DA +    M+E  V  N+V +N+L
Sbjct: 250 KQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTL 309

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G      ++  ++ +  M+  G+ P+++T++T++D +     +GK   +  D+   G+
Sbjct: 310 IGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGL 369

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P +  ++IL  G+ + G+   A  ++  M + G+ P+ V +T +I  +  +  M++A+ 
Sbjct: 370 SPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           +   M E+G+ P++ TY  L+ G+    +   A  L + M EK   P +     +   + 
Sbjct: 430 LRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYC 489

Query: 427 AIGLAREAKRVLKSAEEDRQSMPN 450
             G +  A R+ +  EE ++  PN
Sbjct: 490 KEGSSYRALRLFREMEE-KELPPN 512



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 194/402 (48%), Gaps = 8/402 (1%)

Query: 15  YIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINAC 74
           Y FN ++++G  P    +  L+  +     F       ++  K  +  D   F  +I  C
Sbjct: 115 YYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-SKIKVVLDVYSFGIVIKGC 173

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
            E+G ++++  +  ++++ G  P    Y TLI G    G+ E++  L   M +   V  N
Sbjct: 174 CEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLV-AN 232

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
           + TY +L+         ++ + +  KM   G+ P+  TYN +     + G T  A ++  
Sbjct: 233 EWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFD 292

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           EM+   V  N  T   ++ G C+E    +A   + +MK   ++PNL+ +N+LI GF  ++
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVR 352

Query: 255 DSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
               + KAL+L  +    G+ P +VT++ ++  +   G      ++  +M + GI+P   
Sbjct: 353 K---LGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKV 409

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++IL   + R+   +KA  + +SM + G+ P+V  ++ +I G+C   +M  A  +++ M
Sbjct: 410 TYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSM 469

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            E    PN   Y T++ GY +    +RA  L + MEEK + P
Sbjct: 470 VEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPP 511



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 146/298 (48%), Gaps = 1/298 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E G  P L TY  ++  L +  R K    +  ++ + G+  + + +N +I         +
Sbjct: 261 EHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKAN 320

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           EA ++  +MK  G  P   TYNTLI G+  V K  ++L L + + + + + P+  TYNIL
Sbjct: 321 EANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDL-KSRGLSPSLVTYNIL 379

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           V  +C K     A  VV +M   GI+P  VTY  L   +A+     +A Q+   M+   +
Sbjct: 380 VSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGL 439

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            P+  T  +++ G+C +G M +A R    M E +  PN V++N+++ G+     S    +
Sbjct: 440 TPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALR 499

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
               MEE  + P+V ++  +++         + + + + M+ +GI P   + +++++ 
Sbjct: 500 LFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLISRA 557



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 137/273 (50%), Gaps = 1/273 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L   G+  +A  +F+ + E G    ++TY TL+  L R+ +      ++ +++ DG+
Sbjct: 275 MNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGI 334

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I +N +I+       + +A+ + + +K  G  P+  TYN L+ G+   G    + K
Sbjct: 335 NPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGK 394

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +++ M +++ +KP+  TY IL+  +   +++E+A  +   M   G+ PD  TY+ L   +
Sbjct: 395 VVKEM-EERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGF 453

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A ++   M   +  PNE     +V GYCKEG+   A+R    M+E E+ PN+
Sbjct: 454 CIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNV 513

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
             +  +I+     + S   +  +  M + G+ P
Sbjct: 514 ASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGP 546


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 210/445 (47%), Gaps = 35/445 (7%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++  V K K  EA+ +F   +     P  ITY+TL+    + + F+    L+ ++EK G+
Sbjct: 5   LSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGI 64

Query: 61  KPDSILFNAMINACSESGNVDEAM----------------------------------KI 86
            P + ++N +I    ++G VD A+                                   I
Sbjct: 65  VPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDASLI 124

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            + M ++GC P   TYNTLI G+  +G  +E++ L   M ++ +  P+  TYNIL+  +C
Sbjct: 125 LEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLEN-SCSPDVFTYNILIDGYC 183

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            +   ++   ++ +MV  G +P+ +TYNTL  +  + G+   A  +   M     +P+  
Sbjct: 184 KQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHF 243

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T  +++  +CK G ++ A      M +    P++  +N +I G       D   + L  M
Sbjct: 244 TFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERM 303

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            E G  PDVVT+++I+     A  + +  E+++ +   G   D+   S L  G  ++   
Sbjct: 304 TEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRL 363

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             AE +L  M + G  P+VV +T +I G+C A ++ ++++ + +M + G  P + TY  +
Sbjct: 364 DDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIV 423

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGV 411
           +    ++ +      LL+ M E+GV
Sbjct: 424 IDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 187/381 (49%), Gaps = 6/381 (1%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           L++A  R+K+ +    L          PDSI ++ +IN   ++ +  +A ++  +M+  G
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
             P  + YNT+IKG  + G+ + +  L+      ++  P+  TY ILV A C    I +A
Sbjct: 64  IVPHNAVYNTIIKGLCDNGRVDSA--LVHYRDMQRHCAPSVITYTILVDALCKSARISDA 121

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
             ++  M+ +G  P+ VTYNTL   + + G    A  +  +M  N   P+  T  I++ G
Sbjct: 122 SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 181

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD--KALTLMEEFGVK 272
           YCK+   +D  + L  M +    PN + +N+L+     +K    +D      +M     K
Sbjct: 182 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSL--VKSGKYIDAFNLAQMMLRRDCK 239

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           P   TF+ ++D +   G +    E+F  M   G  PDI+ ++I+  G  RA     A  +
Sbjct: 240 PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL 299

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           L  M + G  P+VV + +++SG C A ++  A  +YE +   G   ++ T  TL+ G  +
Sbjct: 300 LERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCK 359

Query: 393 AKQPWRAEELLQVMEEKGVRP 413
           +++   AE+LL+ ME  G  P
Sbjct: 360 SRRLDDAEKLLREMERNGSAP 380



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 147/307 (47%), Gaps = 5/307 (1%)

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           N L+ A+  K   +EA+++    +     PD++TY+TL   + +  +  +A ++L EM+ 
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
             + P+      I+ G C  G ++ A+   YR  +    P+++ +  L+      K +  
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVH-YRDMQRHCAPSVITYTILVDAL--CKSARI 118

Query: 259 VDKALTL--MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
            D +L L  M E G  P+VVT++T+++ +   G M +   +F+ M++    PD+  ++IL
Sbjct: 119 SDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNIL 178

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             GY +   PQ    +L  M KYG  PN + + T++     + K   A ++ + M     
Sbjct: 179 IDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDC 238

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            P+  T+  ++  + +  Q   A EL Q+M ++G  P   T  ++           +A++
Sbjct: 239 KPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQ 298

Query: 437 VLKSAEE 443
           +L+   E
Sbjct: 299 LLERMTE 305


>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g04810, chloroplastic; AltName: Full=Maize PPR4
           homolog; Short=AtPPR4; Flags: Precursor
 gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
           thaliana]
 gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 952

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 205/413 (49%), Gaps = 42/413 (10%)

Query: 50  SLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY 109
           +L+ ++E++G+     +++ M++  +   +  + + +F+++K+ G  PT  TY  LI  Y
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 494

Query: 110 GNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
             VGK  ++L++ ++M +++ VK N +TY++++  +        A+ V   MV  G++PD
Sbjct: 495 TKVGKISKALEVSRVM-KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 553

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
            + YN +  A+   G   RA Q + EMQ  + RP  RT   I+ GY K G+M  ++    
Sbjct: 554 VILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFD 613

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWS 286
            M+     P +  FN LI G ++ +    ++KA+ +++E    GV  +  T++ IM  ++
Sbjct: 614 MMRRCGCVPTVHTFNGLINGLVEKRQ---MEKAVEILDEMTLAGVSANEHTYTKIMQGYA 670

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDI-----------------------------------H 311
           S G  GK  E F  +   G++ DI                                    
Sbjct: 671 SVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 730

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
           V++IL  G+ R G+  +A  ++  M+K GV P++  +T+ IS    A  M RA    E+M
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM 790

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             +G+ PN+KTY TL+ G+  A  P +A    + M+  G++P K+    +  S
Sbjct: 791 EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTS 843



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 198/388 (51%), Gaps = 7/388 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+    GK  +A  +   + EEG +  L TY+ ++    + K + +  ++   + K+GM
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD IL+N +I+A    GN+D A++  ++M+    +PTT T+  +I GY   G    SL+
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +  +M +   V P   T+N L+     K  +E+A  ++ +M  +G+  +  TY  + + Y
Sbjct: 611 VFDMMRRCGCV-PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 669

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A  G+T +A +    +QN  +  +  T   ++   CK G M+ A+     M    +  N 
Sbjct: 670 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 729

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            V+N LI G+    D       +  M++ GVKPD+ T+++ + A S AG M +  +  ++
Sbjct: 730 FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 789

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G++P+I  ++ L KG+ RA  P+KA S    M+  G+ P+  ++  +++   +   
Sbjct: 790 MEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRAS 849

Query: 361 MQRA------MSIYEKMCEIGINPNLKT 382
           +  A      M+I ++M E G+  ++ T
Sbjct: 850 IAEAYIYSGVMTICKEMVEAGLIVDMGT 877



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 179/393 (45%), Gaps = 5/393 (1%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
            E+  +P+   +  +V    R+           ++   G+ P S ++ ++I+A +   ++
Sbjct: 301 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDM 360

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP--NDRTY 138
           DEA+   +KMK+ G + +  TY+ ++ G+   G  E +        + K +    N   Y
Sbjct: 361 DEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFD---EAKRIHKTLNASIY 417

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
             ++ A C   ++E A  +V +M   GI      Y+T+   Y    +  +   +   ++ 
Sbjct: 418 GKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKE 477

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
               P   T G +++ Y K G +  A+     MKE  V  NL  ++ +I GF+ +KD   
Sbjct: 478 CGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWAN 537

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
                  M + G+KPDV+ ++ I+ A+   G M +  +   +M K    P    F  +  
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIH 597

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           GY ++G+ +++  +   MR+ G  P V  F  +I+G     +M++A+ I ++M   G++ 
Sbjct: 598 GYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA 657

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           N  TY  ++ GY       +A E    ++ +G+
Sbjct: 658 NEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 690



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 157/323 (48%), Gaps = 1/323 (0%)

Query: 96  KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
           KP+ + +  ++K YG  G    + +  + M + + + P  R Y  L+ A+     ++EA 
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERM-RARGITPTSRIYTSLIHAYAVGRDMDEAL 364

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
           + V KM   GI+   VTY+ +   +++ G    A+    E +      N    G I+  +
Sbjct: 365 SCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAH 424

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C+  NME A   +  M+E  +   + ++++++ G+  + D          ++E G  P V
Sbjct: 425 CQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTV 484

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           VT+  +++ ++  G + K  E+   M + G++ ++  +S++  G+V+  +   A ++   
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M K G+ P+V+++  +IS +C    M RA+   ++M ++   P  +T+  ++ GY ++  
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604

Query: 396 PWRAEELLQVMEEKGVRPKKSTI 418
             R+ E+  +M   G  P   T 
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTF 627



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/259 (20%), Positives = 116/259 (44%)

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
           W  V        +P    +  + + Y + G+ +RA +    M+   + P  R    ++  
Sbjct: 294 WQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHA 353

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           Y    +M++A+  + +MKE  +  +LV ++ ++ GF     ++  D      +      +
Sbjct: 354 YAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLN 413

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
              +  I+ A      M + + +  +M + GI+  I ++  +  GY    + +K   +  
Sbjct: 414 ASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFK 473

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            +++ G  P VV +  +I+ +    K+ +A+ +   M E G+  NLKTY  ++ G+ + K
Sbjct: 474 RLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLK 533

Query: 395 QPWRAEELLQVMEEKGVRP 413
               A  + + M ++G++P
Sbjct: 534 DWANAFAVFEDMVKEGMKP 552



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/268 (20%), Positives = 110/268 (41%), Gaps = 41/268 (15%)

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           +L R     G+ ++A    FE  +   +P+    G++V  Y + G+M  A     RM+  
Sbjct: 282 SLQRILDTNGDNWQAVISAFEKIS---KPSRTEFGLMVKFYGRRGDMHRARETFERMRAR 338

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            + P   ++ SLI  +   +D   +D+AL+ + +                          
Sbjct: 339 GITPTSRIYTSLIHAYAVGRD---MDEALSCVRK-------------------------- 369

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
                 M + GIE  +  +S++  G+ +AG  + A+      ++     N  ++  +I  
Sbjct: 370 ------MKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYA 423

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C    M+RA ++  +M E GI+  +  Y T++ GY       +   + + ++E G  P 
Sbjct: 424 HCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPT 483

Query: 415 KSTIQLVADSWRAIG---LAREAKRVLK 439
             T   + + +  +G    A E  RV+K
Sbjct: 484 VVTYGCLINLYTKVGKISKALEVSRVMK 511



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 78/172 (45%)

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           KP    F  ++  +   G M + +E F+ M   GI P   +++ L   Y    +  +A S
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
            +  M++ G+  ++V ++ ++ G+  A   + A   +++   I    N   Y  +++ + 
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           +     RAE L++ MEE+G+    +    + D +  +   ++   V K  +E
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKE 477


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 184/390 (47%), Gaps = 1/390 (0%)

Query: 28  TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIF 87
           T  TYT L+  L      +  +S+ + ++ DG  PD  ++  M++    +G   EA  + 
Sbjct: 141 TAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLL 200

Query: 88  QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
                 G +P    YN LI GY NVG  E ++ + + M  +    PN RTY  L+  +C 
Sbjct: 201 SDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVN-GCSPNVRTYTELISGFCK 259

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
              ++ A  +  +MV +G+ P+ VTY  L +     G+   A ++L  M+N+ + PNE T
Sbjct: 260 SRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWT 319

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
           C +++   CK   + +A   L  + +  +  N +V+ SLI G          D+ +  + 
Sbjct: 320 CSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLV 379

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
             G  PD  T+S+++D       + +   + DDM++ G++P    ++I+    VR     
Sbjct: 380 SQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGAD 439

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            ++ IL  M   G+ P+V  +T  +  +C+  +M+ A  +   M + G+ PNL TY  L+
Sbjct: 440 GSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALI 499

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            GY       +A    + M   G +P + +
Sbjct: 500 CGYANLGLTSQAFSTFKHMVANGCKPNEES 529



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 186/384 (48%), Gaps = 1/384 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G G   EA  +F  +  +G  P    Y T+V  L    R +   +L+S    +G +P+
Sbjct: 152 LCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPN 211

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++NA+I+     G+++ A+ +F++M  +GC P   TY  LI G+    K + ++ L  
Sbjct: 212 VVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFS 271

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D  + PN  TY  L++  CS   ++ A+ ++  M  SG+ P+  T + L  A  ++
Sbjct: 272 RMV-DAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKH 330

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                A+ +L  +    ++ NE     ++ G CK G    A R +  +      P+   +
Sbjct: 331 ERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTY 390

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           +SLI G    K+       L  M E GV+P  VT++ I+D           ++I D M+ 
Sbjct: 391 SSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIA 450

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           AGI+PD+  ++I  + Y   G  + AE ++  M  +GV PN+V +  +I G+ N     +
Sbjct: 451 AGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQ 510

Query: 364 AMSIYEKMCEIGINPNLKTYETLL 387
           A S ++ M   G  PN ++Y  LL
Sbjct: 511 AFSTFKHMVANGCKPNEESYTVLL 534



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 179/405 (44%), Gaps = 7/405 (1%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
            + AL R +    + S  S++    ++     +  +INA   +G++  + +    +  +G
Sbjct: 47  FLMALARHRMLADMESFASRMPARNLRT----YTTLINAYCLAGDLPASKRHLSSLLRAG 102

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
             P +  Y + + GY   G    + +L  LM     V+    TY  L+   C    + EA
Sbjct: 103 FAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVR-TAFTYTALLHGLCGAGMVREA 161

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
            +V   M A G  PD   Y T+       G T  AE +L +       PN      ++ G
Sbjct: 162 MSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDG 221

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           YC  G++E A+    RM      PN+  +  LI GF   +  D      + M + G+ P+
Sbjct: 222 YCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPN 281

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           VVT++ ++    S G +     +   M  +G+ P+    S+L     +     +A+ +L 
Sbjct: 282 VVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLG 341

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
           S+ + G+  N +++T++I G C A +   A  + + +   G  P+  TY +L+ G    K
Sbjct: 342 SLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQK 401

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSW-RAIGLAREAKRVL 438
           +   A  +L  M EKGV+P   T  ++ D   R +G A  +K++L
Sbjct: 402 ELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVG-ADGSKKIL 445



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/461 (23%), Positives = 195/461 (42%), Gaps = 56/461 (12%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K   A  +F+ +++ G  P ++TYT L+       +      L+  +E  G+ P+    +
Sbjct: 262 KLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCS 321

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ-LMSQ 127
            +I+A  +   V EA  +   +   G K     Y +LI G    G+   + +L+Q L+SQ
Sbjct: 322 VLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQ 381

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                P+  TY+ L+   C +  + EA  V+  M+  G+QP  VTY  +     +     
Sbjct: 382 --GFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGAD 439

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            ++++L +M    ++P+  T  I V  YC EG MEDA   +  M +  V PNLV +N+LI
Sbjct: 440 GSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALI 499

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIM-----------------DAWSSAGL 290
            G+ ++  +         M   G KP+  +++ ++                   W  A  
Sbjct: 500 CGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAE- 558

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           M     + ++MVK  +  +I +++       R     +A+ +L  M+   + P+  ++T+
Sbjct: 559 MKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTS 618

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE------AKQ--------- 395
           +I+  C    +  A++  + M + G  P L++Y  ++    E      AKQ         
Sbjct: 619 IIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKE 678

Query: 396 ------PWR--------------AEELLQVMEEKGVRPKKS 416
                  WR                 LL VMEEK  RP  +
Sbjct: 679 YNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDA 719



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 113/527 (21%), Positives = 211/527 (40%), Gaps = 89/527 (16%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G G+  EA  + +  + EG  P ++ Y  L+         +  + +  +++ +G  P+
Sbjct: 187 LCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPN 246

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +  +I+   +S  +D AM +F +M D+G  P   TY  LI+G  + G+ + + +LLQ
Sbjct: 247 VRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQ 306

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW--------------NVVYK--------- 160
            M ++  + PN+ T ++L+ A C    + EA                +VY          
Sbjct: 307 SM-ENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKA 365

Query: 161 ------------MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
                       +V+ G  PDA TY++L     +  E   A  +L +M    V+P+  T 
Sbjct: 366 GRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTY 425

Query: 209 GII-----------------------------------VSGYCKEGNMEDAMRFLYRMKE 233
            II                                   V  YC EG MEDA   +  M +
Sbjct: 426 TIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVD 485

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIM----------- 282
             V PNLV +N+LI G+ ++  +         M   G KP+  +++ ++           
Sbjct: 486 HGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNN 545

Query: 283 ------DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
                   W  A  M     + ++MVK  +  +I +++       R     +A+ +L  M
Sbjct: 546 IPANSVSIWKIAE-MKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEM 604

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
           +   + P+  ++T++I+  C    +  A++  + M + G  P L++Y  ++    E    
Sbjct: 605 QSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSI 664

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             A+++   M  K    ++   +++ D     G   E   +L   EE
Sbjct: 665 QTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEE 711



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 3/256 (1%)

Query: 190 EQMLFEMQNNQVR---PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +ML +M++   R    N RT   +++ YC  G++  + R L  +      P+   + S 
Sbjct: 54  HRMLADMESFASRMPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSF 113

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + G+          +   LM   G      T++ ++     AG++ +   +F  M   G 
Sbjct: 114 VVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGC 173

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD HV++ +  G   AG  ++AE++L+     G  PNVV++  +I G+CN   ++ A+ 
Sbjct: 174 APDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVD 233

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           ++E+M   G +PN++TY  L+ G+ ++++  RA  L   M + G+ P   T   +     
Sbjct: 234 VFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQC 293

Query: 427 AIGLAREAKRVLKSAE 442
           + G    A R+L+S E
Sbjct: 294 SDGQLDCAYRLLQSME 309



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/307 (21%), Positives = 138/307 (44%)

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           N RTY  L+ A+C    +  +   +  ++ +G  PD+  Y +    Y + G    A ++ 
Sbjct: 71  NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLF 130

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
             M          T   ++ G C  G + +AM     M+     P+  V+ +++ G    
Sbjct: 131 VLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGA 190

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
             +   +  L+     G +P+VV ++ ++D + + G +    ++F+ M   G  P++  +
Sbjct: 191 GRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTY 250

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           + L  G+ ++ +  +A  + + M   G+ PNVV +T +I G C+  ++  A  + + M  
Sbjct: 251 TELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMEN 310

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
            G+ PN  T   L+    + ++   A+ LL  + +KG++  +     + D     G    
Sbjct: 311 SGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAA 370

Query: 434 AKRVLKS 440
           A R++++
Sbjct: 371 ADRLMQT 377



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 1/127 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P+   YT+++A   R K     L+ +  + K G  P    +  +I++  E G++  A ++
Sbjct: 611 PSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQV 670

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F  M           +  LI G    G   E   LL +M ++KN +P+D  Y  L     
Sbjct: 671 FGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVM-EEKNYRPSDALYARLTGKIT 729

Query: 147 SKNSIEE 153
             N I+E
Sbjct: 730 DANDIQE 736


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 197/406 (48%), Gaps = 2/406 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +P  A  +F  L+  G  P + +Y TL+   +++        L  K+ +  + PD + +N
Sbjct: 137 RPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYN 196

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           ++I+   ++  + ++ ++ ++M D+G +P   TYN+LI GY   G  +ES+++ + MS  
Sbjct: 197 SLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSS- 255

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
             + P     N  + A C  N I+EA ++   MV  G +P+ ++Y+TL   YA  G    
Sbjct: 256 SGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFAN 315

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
              ++  M +  + PN R   I+++ Y + G M+ AM     M+   + P+ V F ++I 
Sbjct: 316 MNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVIS 375

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI-E 307
               I   D        M + GV P    +  ++    + G + K +E+  +M+   I  
Sbjct: 376 SLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPP 435

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P +  FS +     + G   + + I+  M + G  PNVV F +++ G+C    M+ A ++
Sbjct: 436 PGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 495

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            + M  IGI PN   Y TL+ GY +  +   A  + + M  KGV+P
Sbjct: 496 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKP 541



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 210/408 (51%), Gaps = 8/408 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  +A+ +F  +IE+   P ++TY +L+  L + K       ++ ++   G++P++  
Sbjct: 170 EGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKT 229

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N++I   S +G   E++++F++M  SG  P     N+ I       + +E+  +   M 
Sbjct: 230 YNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMV 289

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K  KPN  +Y+ L+  + ++       ++V  MV+ GI P+   +N L  AYA+ G  
Sbjct: 290 L-KGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMM 348

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A  +  +MQN  + P+  T   ++S  C+ G ++DA+     M ++ V P+  V+  L
Sbjct: 349 DKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCL 408

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVK----PDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           I+G  +  +   + KA  L+ E   K    P V  FS+I++     G + + ++I D MV
Sbjct: 409 IQGCCNHGE---LVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMV 465

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           + G  P++  F+ L +GY   G  ++A ++L +M   G+ PN  ++ T++ G+C   ++ 
Sbjct: 466 QTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRID 525

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
            A++++  M   G+ P    Y  +L G  +A++   A+++   M E G
Sbjct: 526 DALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESG 573



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/465 (22%), Positives = 210/465 (45%), Gaps = 37/465 (7%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  IF+ ++ +G +P +I+Y+TL+     +  F ++ SL++ +   G+ P+   FN +I
Sbjct: 280 EAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILI 339

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           NA +  G +D+AM IF+ M++ G  P T T+ T+I     +G+ +++L     M  D  V
Sbjct: 340 NAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMV-DIGV 398

Query: 132 KPNDRTYNILVRAWCS------------------------------------KNSIEEAW 155
            P++  Y  L++  C+                                    +  + E  
Sbjct: 399 PPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGK 458

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
           +++  MV +G +P+ VT+N+L   Y   G    A  +L  M +  + PN    G +V GY
Sbjct: 459 DIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGY 518

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           CK G ++DA+     M    V P  V++N ++ G    + +    K    M E G    +
Sbjct: 519 CKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSI 578

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
            T+  ++          +   + + +    ++ DI  F+I+    ++ G  Q+A+ +  +
Sbjct: 579 QTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAA 638

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           +  YG+ P V  +  +IS        + A +++  + + G  P+ +    ++    +  +
Sbjct: 639 ISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAE 698

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
             +A   L +++E  +  + STI L+A  +   G  RE  ++L +
Sbjct: 699 VAKASNYLSIIDENNLTLEASTISLLASLFSREGKCREHIKLLPA 743



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 114/515 (22%), Positives = 214/515 (41%), Gaps = 52/515 (10%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G RP   TY +L+   +    +K  + +  ++   G+ P  +  N+ I+A      
Sbjct: 218 MVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNR 277

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           + EA  IF  M   G KP   +Y+TL+ GY   G       L+ LM   K + PN R +N
Sbjct: 278 IKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVS-KGIVPNHRFFN 336

Query: 140 ILVRAW-----------------------------------CSKNSIEEAWNVVYKMVAS 164
           IL+ A+                                   C    +++A +    MV  
Sbjct: 337 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 396

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP-NERTCGIIVSGYCKEGNMED 223
           G+ P    Y  L +    +GE  +A++++ EM N  + P   +    I++   KEG + +
Sbjct: 397 GVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAE 456

Query: 224 AMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD 283
               +  M +    PN+V FNSL++G+  + + +     L  M   G++P+   + T++D
Sbjct: 457 GKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 516

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
            +   G +     +F DM+  G++P   +++I+  G  +A     A+ +   M + G   
Sbjct: 517 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTV 576

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           ++  +  V+ G C       A  + EK+  + +  ++ T+  ++    +  +   A+EL 
Sbjct: 577 SIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELF 636

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS-----------MPNKK 452
             +   G+ P   T  L+  +        EA  +  S E+  ++           M  KK
Sbjct: 637 AAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKK 696

Query: 453 DEIAVE----SIHRKQNLSASNSTFLQIPGVVSSE 483
            E+A      SI  + NL+   ST   +  + S E
Sbjct: 697 AEVAKASNYLSIIDENNLTLEASTISLLASLFSRE 731



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 163/352 (46%), Gaps = 36/352 (10%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P    +N +I+        + A+ +F ++  +G  P   +YNTLI G+   G+ +++ +L
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
              M + ++V P+  TYN L+   C    + ++  V+ +MV +GI+P+  TYN+L   Y+
Sbjct: 180 FYKMIE-QSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYS 238

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
             G    + ++  EM ++ + P    C   +   C+            R+KE +      
Sbjct: 239 TAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHN----------RIKEAK------ 282

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
                     DI DS         M   G KP+++++ST++  +++ G       + + M
Sbjct: 283 ----------DIFDS---------MVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLM 323

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           V  GI P+   F+IL   Y R G   KA  I   M+  G+ P+ V F TVIS  C   ++
Sbjct: 324 VSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 383

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             A+  +  M +IG+ P+   Y  L+ G     +  +A+EL+  M  K + P
Sbjct: 384 DDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPP 435



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 133/302 (44%), Gaps = 35/302 (11%)

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P   TYNIL+  +   +  E A  V  +++ +G+ PD  +YNTL                
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTL---------------- 163

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
                              + G+ KEG ++ A    Y+M E  V P++V +NSLI G   
Sbjct: 164 -------------------IDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCK 204

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
            K+    ++ L  M + G++P+  T+++++  +S+AG+  +   +F +M  +G+ P +  
Sbjct: 205 TKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVN 264

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
            +       R    ++A+ I  SM   G  PN++ ++T++ G+          S+   M 
Sbjct: 265 CNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMV 324

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
             GI PN + +  L+  Y       +A  + + M+ KG+ P   T   V  S   IG   
Sbjct: 325 SKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 384

Query: 433 EA 434
           +A
Sbjct: 385 DA 386



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/296 (20%), Positives = 141/296 (47%), Gaps = 4/296 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  E   I + +++ G RP ++T+ +L+         +   +L+  +   G+
Sbjct: 445 INNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGI 504

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+  ++  +++   ++G +D+A+ +F+ M   G KPT+  YN ++ G     +   + K
Sbjct: 505 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKK 564

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M +      + +TY +++   C  N  +EA  ++ K+ A  ++ D +T+N +  A 
Sbjct: 565 MFHEMIE-SGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 623

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A+++   +    + P   T  +++S   KE + E+A      +++    P+ 
Sbjct: 624 LKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDS 683

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            + N +++  L   +       L++++E  +  +  T S +   +S     GKC+E
Sbjct: 684 RLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSRE---GKCRE 736



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 119/261 (45%), Gaps = 10/261 (3%)

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P   T  I++  Y +    E A+    R+    + P++  +N+LI GF        VDKA
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGF---SKEGEVDKA 176

Query: 263 LTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
             L   M E  V PDVVT+++++D       M K + + + MV AGI P+   ++ L  G
Sbjct: 177 YELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYG 236

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y  AG  +++  +   M   G+ P VV   + I   C   +++ A  I++ M   G  PN
Sbjct: 237 YSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPN 296

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + +Y TLL GY           L+ +M  KG+ P      ++ +++   G+  +A  +  
Sbjct: 297 IISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIF- 355

Query: 440 SAEEDRQSMPNKKDEIAVESI 460
              ED Q+     D +   ++
Sbjct: 356 ---EDMQNKGMIPDTVTFATV 373



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 54/115 (46%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F  +   G  PT+ TY  +++ L +++ ++   +L   VEK G  PDS L 
Sbjct: 627 GRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLL 686

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           N ++    +   V +A      + ++      ST + L   +   GK  E +KLL
Sbjct: 687 NHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREGKCREHIKLL 741


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 208/420 (49%), Gaps = 8/420 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +    F  +I  G RPT+ TY  ++  + ++   ++   L  +++  G+ PD++ +
Sbjct: 109 GKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY 168

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N+MI+   + G +D+ +  F++MKD  C+P   TYN LI  +   GK    L+  + M +
Sbjct: 169 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM-K 227

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              +KPN  +Y+ LV A+C +  +++A      M   G+ P+  TY +L  A  + G   
Sbjct: 228 GNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLS 287

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++  EM    V  N  T   ++ G C    M++A     +M    V PNL  +N+LI
Sbjct: 288 DAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI 347

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            GF+  K+   +D+AL L+ E    G+KPD++ + T +    S   +   + + ++M + 
Sbjct: 348 HGFVKAKN---MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKEC 404

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           GI+ +  +++ L   Y ++G P +   +L  M++  +   VV F  +I G C    + +A
Sbjct: 405 GIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKA 464

Query: 365 MSIYEKMC-EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           +  + ++  + G+  N   +  ++ G  +  Q   A  L + M +KG+ P ++    + D
Sbjct: 465 VDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD 524



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/505 (22%), Positives = 227/505 (44%), Gaps = 39/505 (7%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ +  +G    A  +F  +   G  P  +TY +++    +  R    +    +++    
Sbjct: 137 IDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCC 196

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD I +NA+IN   + G +   ++ +++MK +G KP   +Y+TL+  +   G  ++++K
Sbjct: 197 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 256

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M +   + PN+ TY  L+ A C   ++ +A+ +  +M+  G++ + VTY  L    
Sbjct: 257 FYVDMRR-VGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 315

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                   AE++  +M    V PN  +   ++ G+ K  NM+ A+  L  +K   + P+L
Sbjct: 316 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 375

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +++ + I G   ++  +     +  M+E G+K + + ++T+MDA+  +G   +   + D+
Sbjct: 376 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 435

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM-RKYGVHPNVVMFTTVISGWCNAV 359
           M +  IE  +  F +L  G  +     KA      +   +G+  N  +FT +I G C   
Sbjct: 436 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 495

Query: 360 KMQRAMSIYE-----------------------------------KMCEIGINPNLKTYE 384
           +++ A +++E                                   KM EIG+  +L  Y 
Sbjct: 496 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 555

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           +L+WG     Q  +A   L+ M  +G+ P +     V      +G   EA   L+S    
Sbjct: 556 SLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVE-LQSYLMK 614

Query: 445 RQSMPNKKDEIAVESIHRKQNLSAS 469
            Q + +  D  A+ +I+  QNL +S
Sbjct: 615 HQLLTSDNDN-ALPNIYSDQNLVSS 638



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 193/397 (48%), Gaps = 1/397 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P    +  L + L      +  +   SK+++  + P +   N +++  ++ G  D+  + 
Sbjct: 58  PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F+ M  +G +PT  TYN +I      G  E +  L + M + + + P+  TYN ++  + 
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM-KFRGLVPDTVTYNSMIDGFG 176

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               +++      +M     +PD +TYN L   + ++G+     +   EM+ N ++PN  
Sbjct: 177 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 236

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           +   +V  +CKEG M+ A++F   M+ + + PN   + SLI     I +     +    M
Sbjct: 237 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 296

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            + GV+ +VVT++ ++D    A  M + +E+F  M  AG+ P++  ++ L  G+V+A   
Sbjct: 297 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 356

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +A  +L  ++  G+ P+++++ T I G C+  K++ A  +  +M E GI  N   Y TL
Sbjct: 357 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 416

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           +  Y ++  P     LL  M+E  +     T  ++ D
Sbjct: 417 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLID 453



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/382 (24%), Positives = 181/382 (47%), Gaps = 1/382 (0%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P   +F+A+ +   + G ++EA++ F KMK     P T + N L+  +  +GK ++  + 
Sbjct: 58  PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
            + M      +P   TYNI++   C +  +E A  +  +M   G+ PD VTYN++   + 
Sbjct: 118 FKDMIG-AGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 176

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           + G          EM++    P+  T   +++ +CK G +   + F   MK   + PN+V
Sbjct: 177 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 236

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            +++L+  F          K    M   G+ P+  T+++++DA    G +     + ++M
Sbjct: 237 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 296

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           ++ G+E ++  ++ L  G   A   ++AE +   M   GV PN+  +  +I G+  A  M
Sbjct: 297 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 356

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            RA+ +  ++   GI P+L  Y T +WG    ++   A+ ++  M+E G++        +
Sbjct: 357 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 416

Query: 422 ADSWRAIGLAREAKRVLKSAEE 443
            D++   G   E   +L   +E
Sbjct: 417 MDAYFKSGNPTEGLHLLDEMKE 438


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 217/428 (50%), Gaps = 7/428 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L+  G   EA  ++  ++ EG +P+L TY+ L+ AL +++  + ++ L+ ++E  G+
Sbjct: 199 IHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGL 258

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+   F   I     +G +DEA +IF++M D GC P   TY  LI    N G+ E + +
Sbjct: 259 RPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKE 318

Query: 121 LLQLMSQDKNVKPNDRTYNILV---RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           L   M  + + KP+   Y  L+     +   ++ +E W+   +M A G  PD VT+  L 
Sbjct: 319 LFVKMKANGH-KPDQVIYITLLDKFNDFGDLDTFKEFWS---QMEADGYMPDVVTFTILV 374

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               +  +   A      M+   + PN  T   ++ G  + G +EDA++ L  M+ + V 
Sbjct: 375 DVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQ 434

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P    +N  I  F    ++    +    M+  G+ P++V  +  + + +  G + + + +
Sbjct: 435 PTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTM 494

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F+ + + G+ PD   ++++ K Y + G+  +A ++L+ M + G  P+V++  ++I     
Sbjct: 495 FNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYK 554

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           A ++  A  ++++M ++ ++P + TY TLL G G+  +  +A EL + M EK   P   +
Sbjct: 555 AGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTIS 614

Query: 418 IQLVADSW 425
              + D +
Sbjct: 615 FNTLLDCF 622



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 199/392 (50%), Gaps = 7/392 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L   GK  EA+ IF  + +EG  P L+TYT L+ AL    + ++   L  K++ +G 
Sbjct: 269 IRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH 328

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD +++  +++  ++ G++D   + + +M+  G  P   T+  L+         +E+  
Sbjct: 329 KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFA 388

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
              +M + + + PN  TYN L+        IE+A  ++  M + G+QP A TYN     +
Sbjct: 389 TFDVMRK-QGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYF 447

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + GET +A +   +M+   + PN   C   +    + G + +A      ++E  + P+ 
Sbjct: 448 GKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDS 507

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +N ++K +  +     VD+A+ L+ E    G +PDV+  ++++D+   AG + +  ++
Sbjct: 508 VTYNMMMKCYSKVGQ---VDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQM 564

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           FD M    + P +  ++ L  G  + G  QKA  +  SM +    PN + F T++  +C 
Sbjct: 565 FDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCK 624

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             +++ A+ ++ KM  +   P++ TY T+++G
Sbjct: 625 NDEVELALKMFSKMTVMDCKPDVLTYNTVIYG 656



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 187/413 (45%), Gaps = 36/413 (8%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           R  L TY T+  AL+ +   + + ++++K+ K G   ++  +N +I+   +SG   EA++
Sbjct: 154 RRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALE 213

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           ++++M   G KP+  TY+ L+   G     E  + LL+ M +D  ++PN  T+ I +R  
Sbjct: 214 VYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEM-EDLGLRPNVYTFTICIRVL 272

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                I+EA+ +  +M   G  PD VTY                                
Sbjct: 273 GRAGKIDEAYEIFRRMDDEGCGPDLVTYT------------------------------- 301

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
               +++   C  G +E+A     +MK     P+ V++ +L+  F D  D D   +  + 
Sbjct: 302 ----VLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQ 357

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           ME  G  PDVVTF+ ++D    A    +    FD M K GI P++H ++ L  G +RAG 
Sbjct: 358 MEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGR 417

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            + A  +L +M   GV P    +   I  +  + +  +A+  +EKM   GI PN+     
Sbjct: 418 IEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNA 477

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            L+   E  +   A+ +   + E G+ P   T  ++   +  +G   EA  +L
Sbjct: 478 SLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLL 530



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 182/395 (46%), Gaps = 2/395 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+   A  +F  +   GH+P  + Y TL+          +     S++E DG 
Sbjct: 304 IDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGY 363

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + F  +++   ++ + DEA   F  M+  G  P   TYNTLI G    G+ E++LK
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALK 423

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M +   V+P   TYNI +  +       +A     KM A GI P+ V  N    + 
Sbjct: 424 LLGTM-ESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSL 482

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+ G    A+ M   ++ N + P+  T  +++  Y K G +++A+  L  M      P++
Sbjct: 483 AEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDV 542

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +V NSLI         D   +    M++  + P VVT++T++      G + K  E+F+ 
Sbjct: 543 IVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFES 602

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M++    P+   F+ L   + +  E + A  + + M      P+V+ + TVI G     K
Sbjct: 603 MIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENK 662

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           +  A   + ++ +  ++P+  T  TLL G  +  Q
Sbjct: 663 VNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQ 696



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 171/338 (50%), Gaps = 10/338 (2%)

Query: 13   AHYIFNCLIEE-GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
            A+ IF+   ++ G  PTL +Y  L+  L      +    L   ++  G  PD+  FN ++
Sbjct: 771  AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830

Query: 72   NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-QLMSQDKN 130
                +SG + E  +++++M    CKP   TYN +I         +++L     L+S D  
Sbjct: 831  AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSD-- 888

Query: 131  VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
             +P  RTY  L+        +EEA  +  +M   G +P+   +N L   Y + G+T  A 
Sbjct: 889  FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETAC 948

Query: 191  QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            Q+   M N  +RP+ ++  I+V   C  G +++A+ +   +K   + P+ + +N +I G 
Sbjct: 949  QLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIING- 1007

Query: 251  LDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
              +  S  +++AL L  E    G+ PD+ T++++M     AG++ + + +++++  AG+E
Sbjct: 1008 --LGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLE 1065

Query: 308  PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
            PD+  ++ L +GY  +  P+ A ++  +M   G +PN+
Sbjct: 1066 PDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNI 1103



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 171/338 (50%), Gaps = 6/338 (1%)

Query: 83   AMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV--KPNDRTYN 139
            A +IF K  K  G  PT ++YN LI     V   E++  L + M   KNV   P+  T+N
Sbjct: 771  AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDM---KNVGCAPDAFTFN 827

Query: 140  ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            +L+        I E + +  +M++   +PDA+TYN +  + A+     +A    +++ ++
Sbjct: 828  MLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSS 887

Query: 200  QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              RP  RT G ++ G  K G +E+AMR    M +    PN  +FN LI G+  I D++  
Sbjct: 888  DFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETA 947

Query: 260  DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
             +    M   G++PD+ +++ ++D    AG + +    F+++   G++PD   ++ +  G
Sbjct: 948  CQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIING 1007

Query: 320  YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
              ++   ++A ++   MR  G+ P++  + +++     A  +++A  +YE++   G+ P+
Sbjct: 1008 LGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPD 1067

Query: 380  LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            + TY  L+ GY  ++ P  A  + + M   G  P   T
Sbjct: 1068 VFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGT 1105



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 174/356 (48%), Gaps = 8/356 (2%)

Query: 35   LVAALTRQKRFKSILSLISKVEKD-GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS 93
            LV  L + KR      +  K  K  G+ P    +N +I    E    ++A  +F+ MK+ 
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817

Query: 94   GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
            GC P   T+N L+  +G  GK  E  +L + M   +  KP+  TYNI++ +    N++++
Sbjct: 818  GCAPDAFTFNMLLAVHGKSGKITELFELYKEMIS-RRCKPDAITYNIVISSLAKSNNLDK 876

Query: 154  AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
            A +  Y +V+S  +P   TY  L    A+ G    A ++  EM +   +PN     I+++
Sbjct: 877  ALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILIN 936

Query: 214  GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---G 270
            GY K G+ E A +   RM    + P+L  +  L+     +  +  VD+AL    E    G
Sbjct: 937  GYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDC---LCLAGRVDEALYYFNELKSTG 993

Query: 271  VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
            + PD + ++ I++    +  M +   ++++M   GI PD++ ++ L      AG  ++A+
Sbjct: 994  LDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAK 1053

Query: 331  SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             +   ++  G+ P+V  +  +I G+  +   + A ++Y+ M   G NPN+ TY  L
Sbjct: 1054 RMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 208/455 (45%), Gaps = 17/455 (3%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  EA  +FN L E G  P  +TY  ++   ++  +    ++L+S++ ++G +PD
Sbjct: 482 LAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I+ N++I++  ++G VDEA ++F +MKD    PT  TYNTL+ G G  G+ +++++L +
Sbjct: 542 VIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFE 601

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + K   PN  ++N L+  +C  + +E A  +  KM     +PD +TYNT+     + 
Sbjct: 602 SMIE-KKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKE 660

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR----FLYRMKELEVHPN 239
            +   A     +++ + + P+  T   ++ G  K G + DA+     F+Y+++      N
Sbjct: 661 NKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVR---FRVN 716

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
              +  L+ G L   +   +DKA+   EE    G+  +      ++             +
Sbjct: 717 RSFWEDLMGGTLVEAE---MDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQ 773

Query: 297 IFDDMVKA-GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           IFD   K  GI P +  ++ L    +     +KA  +   M+  G  P+   F  +++  
Sbjct: 774 IFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVH 833

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
             + K+     +Y++M      P+  TY  ++    ++    +A +    +     RP  
Sbjct: 834 GKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            T   + D    +G   EA R+ +    D    PN
Sbjct: 894 RTYGPLIDGLAKVGRLEEAMRLFEEM-SDYGCKPN 927



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/377 (24%), Positives = 168/377 (44%), Gaps = 1/377 (0%)

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N M+        V++   +F+ M+    +    TY T+ K     G   +   +L  M +
Sbjct: 126 NFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRK 185

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              V  N  +YN L+          EA  V  +MV+ G++P   TY+ L  A  +  ++ 
Sbjct: 186 AGFVL-NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSE 244

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
               +L EM++  +RPN  T  I +    + G +++A     RM +    P+LV +  LI
Sbjct: 245 MVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLI 304

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
               +    +   +    M+  G KPD V + T++D ++  G +   +E +  M   G  
Sbjct: 305 DALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYM 364

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+  F+IL     +A +  +A +    MRK G+ PN+  + T+I G   A +++ A+ +
Sbjct: 365 PDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKL 424

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
              M  +G+ P   TY   +  +G++ +  +A E  + M+ KG+ P          S   
Sbjct: 425 LGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAE 484

Query: 428 IGLAREAKRVLKSAEED 444
           +G  REAK +     E+
Sbjct: 485 MGRLREAKTMFNGLREN 501



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 147/312 (47%), Gaps = 42/312 (13%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            GK  E   ++  +I    +P  ITY  ++++L +       L     +     +P    +
Sbjct: 837  GKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTY 896

Query: 68   NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
              +I+  ++ G ++EAM++F++M D GCKP  + +N LI GYG +G  E + +L + M  
Sbjct: 897  GPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMV- 955

Query: 128  DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            ++ ++P+ ++Y ILV   C    ++EA     ++ ++G+ PD + YN             
Sbjct: 956  NEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNR------------ 1003

Query: 188  RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
                                   I++G  K   ME+A+     M+   + P+L  +NSL+
Sbjct: 1004 -----------------------IINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM 1040

Query: 248  KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
               L++  +  V++A  + EE    G++PDV T++ ++  +S +        ++ +M+  
Sbjct: 1041 ---LNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVD 1097

Query: 305  GIEPDIHVFSIL 316
            G  P+I  ++ L
Sbjct: 1098 GCNPNIGTYAQL 1109



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/423 (20%), Positives = 184/423 (43%), Gaps = 22/423 (5%)

Query: 26   RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
            +P ++TY T++  L ++ +         +++K  M PD +    ++    + G + +A+ 
Sbjct: 644  KPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAIS 702

Query: 86   IFQK-MKDSGCKPTTSTYNTLIKGY---GNVGKP---EESLKLLQLMSQDKNVKPNDRTY 138
            I +  M     +   S +  L+ G      + K     E L L  +  +D  + P     
Sbjct: 703  IARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIP----- 757

Query: 139  NILVRAWCSKNSIEEAWNVVYKMVAS-GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
              LVR  C       A+ +  K     GI P   +YN L     +   T +A  +  +M+
Sbjct: 758  --LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMK 815

Query: 198  NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
            N    P+  T  ++++ + K G + +       M      P+ + +N +I     +  S+
Sbjct: 816  NVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISS---LAKSN 872

Query: 258  GVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
             +DKAL    +      +P   T+  ++D  +  G + +   +F++M   G +P+  +F+
Sbjct: 873  NLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFN 932

Query: 315  ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            IL  GY + G+ + A  +   M   G+ P++  +T ++   C A ++  A+  + ++   
Sbjct: 933  ILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992

Query: 375  GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
            G++P+   Y  ++ G G++++   A  L   M  +G+ P   T   +  +    G+  +A
Sbjct: 993  GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052

Query: 435  KRV 437
            KR+
Sbjct: 1053 KRM 1055



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 149/367 (40%), Gaps = 71/367 (19%)

Query: 98  TTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
           TT T N +++      K E+   + + M Q K ++ +  TY  + +A   +  + +   V
Sbjct: 121 TTETCNFMLEFLRVHDKVEDMAAVFEFM-QKKIIRRDLDTYLTIFKALSIRGGLRQMTTV 179

Query: 158 VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
           + KM  +G   +A +YN L                                 +I SG+C 
Sbjct: 180 LNKMRKAGFVLNAYSYNGLIHL------------------------------LIQSGFCG 209

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
           E     A+    RM    + P+L  +++L+      +DS+ V   L  ME+ G++P+V T
Sbjct: 210 E-----ALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYT 264

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           F+  +     AG + +  EIF  M   G  PD+  +++L      AG+ + A+ +   M+
Sbjct: 265 FTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMK 324

Query: 338 ----------------KY-------------------GVHPNVVMFTTVISGWCNAVKMQ 362
                           K+                   G  P+VV FT ++   C A    
Sbjct: 325 ANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFD 384

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A + ++ M + GI PNL TY TL+ G   A +   A +LL  ME  GV+P   T  +  
Sbjct: 385 EAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFI 444

Query: 423 DSWRAIG 429
           D +   G
Sbjct: 445 DYFGKSG 451


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 219/455 (48%), Gaps = 10/455 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT+ TY  L+    R +R    L +  ++ + G+ PD   +NA+I+  S+ G VD+A  +
Sbjct: 187 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 246

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F KM++ G  P   TY++LI G     + +++ ++L+ M     V+PN+ TYN L+  + 
Sbjct: 247 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMV-GAGVRPNNMTYNCLIHGYS 305

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           +    +E+  V  +M +S + PD    N+   A  ++G    A  +   M     +P+  
Sbjct: 306 TSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVI 365

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
           + G ++ GY   G +   M  L+ +   E V P+  VFN+LI  +  +     +DK+L +
Sbjct: 366 SYGALLHGYATAGCIA-GMDNLFNVMVCEGVVPDRHVFNTLINAYARL---GMMDKSLLM 421

Query: 266 MEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
            E+    GV PD++TFST++ A+   G +    E F+ M+  G+ PD  V+S L +G   
Sbjct: 422 FEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCN 481

Query: 323 AGEPQKAESILTSMRKYGVHPNVV-MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
             +  KA+ +++ M   G+ P  +  FT++I+  C   ++     + + +   G  PNL 
Sbjct: 482 RRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLI 541

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           T+ +L+ GY        A  LL  ME  GV P   T   + D +   G   +A  + +  
Sbjct: 542 TFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDM 601

Query: 442 EEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQI 476
              R ++ +    I +  + + +    +   F ++
Sbjct: 602 LHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEM 636



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/438 (23%), Positives = 206/438 (47%), Gaps = 35/438 (7%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +P     +F  L+  G  P + +Y  L+   +++        L  K+E+ G+ P+ + ++
Sbjct: 204 RPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYS 263

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           ++IN   ++  +D+A ++ ++M  +G +P   TYN LI GY   G  +ES+++ + MS  
Sbjct: 264 SLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSS 323

Query: 129 ----------------------------------KNVKPNDRTYNILVRAWCSKNSIEEA 154
                                             K  KP+  +Y  L+  + +   I   
Sbjct: 324 LLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGM 383

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
            N+   MV  G+ PD   +NTL  AYA+ G   ++  M  +M    V P+  T   ++S 
Sbjct: 384 DNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISA 443

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           +C+ G ++DAM     M +  V P+  V++ LI+G  + +D     + ++ M   G+ P 
Sbjct: 444 FCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPP 503

Query: 275 VVT-FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
            +  F++I++     G + + +++ D ++  G  P++  F+ L  GY   G  ++A  +L
Sbjct: 504 CIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLL 563

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
            SM   GV P++  + T++ G+C   ++  A++++  M    +     +Y  +L G  +A
Sbjct: 564 DSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQA 623

Query: 394 KQPWRAEELLQVMEEKGV 411
           ++   A+E+   M E G+
Sbjct: 624 RRTIVAKEMFHEMIESGM 641



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/417 (23%), Positives = 200/417 (47%), Gaps = 8/417 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L   G+  EA  IF+ ++ +G +P +I+Y  L+           + +L + +  +G+
Sbjct: 336 MTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGV 395

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD  +FN +INA +  G +D+++ +F+ M   G  P   T++T+I  +  +G+ +++++
Sbjct: 396 VPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAME 455

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT-LARA 179
               M  D  V P+   Y+ L++  C++  + +A  ++  M++ GI P  + + T +   
Sbjct: 456 KFNHMI-DTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINN 514

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G     + ++  + +   RPN  T   +V GYC  GNM++A+  L  M+ + V P+
Sbjct: 515 LCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPD 574

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           +  +N+L+ G+        +D ALTL  +     V    V+++ I+     A      +E
Sbjct: 575 IYTYNTLVDGYC---KHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKE 631

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F +M+++G+   IH ++ +  G  R     +A  +L  +    V  +++ F  VI    
Sbjct: 632 MFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMF 691

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
              + Q A  ++  +   G+ P + TY  ++    + +    A+ L   ME+    P
Sbjct: 692 KVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTP 748



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/423 (22%), Positives = 195/423 (46%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +FN ++ EG  P    + TL+ A  R       L +   + K G+ PD I F+ +I+A  
Sbjct: 386 LFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFC 445

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
             G +D+AM+ F  M D+G  P T+ Y+ LI+G  N     ++ +L+  M       P  
Sbjct: 446 RLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCI 505

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           + +  ++   C +  + E  +VV  ++ +G +P+ +T+N+L   Y   G    A  +L  
Sbjct: 506 KFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDS 565

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M++  V P+  T   +V GYCK G ++DA+     M    V    V +N ++ G    + 
Sbjct: 566 MESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARR 625

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
           +    +    M E G+   + T++T++          +   + + +    ++ DI  F+I
Sbjct: 626 TIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNI 685

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           + +   + G  Q+A+ +  ++  YG+ P ++ +  +I+        + A +++  M +  
Sbjct: 686 VIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSS 745

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
             P+ +    ++       +  +A   L  +++KG+ P+ +T  L+   +   G  RE  
Sbjct: 746 CTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYI 805

Query: 436 RVL 438
           ++L
Sbjct: 806 KLL 808



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 108/231 (46%)

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           +  P   T  I+++ Y +    +  +    R+    + P++  +N+LI GF    + D  
Sbjct: 184 EAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKA 243

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
                 MEE G+ P+VVT+S++++       M K + +   MV AG+ P+   ++ L  G
Sbjct: 244 HDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHG 303

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y  +G  +++  +   M    + P+V    + ++  C   +++ A  I++ M   G  P+
Sbjct: 304 YSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPD 363

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           + +Y  LL GY  A      + L  VM  +GV P +     + +++  +G+
Sbjct: 364 VISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGM 414



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 56/115 (48%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F  +   G  PT++TY  ++  L +++ F+   +L S +EK    PDS + 
Sbjct: 694 GRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRIL 753

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           N +I      G V +A     K+   G  P  +T + LI  +   GK  E +KLL
Sbjct: 754 NEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLL 808


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 210/432 (48%), Gaps = 1/432 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   ++  IF  +   G  P++ T   ++ ++ +     S+ S + ++ K  + PD   
Sbjct: 136 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDVAT 195

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           FN +IN     G+  ++  + QKM+ SG  PT  TYNT++  Y   G+ + +++LL  M+
Sbjct: 196 FNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMN 255

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K V  +  TYN+L+   C  N   + + ++  M    I P+ VTYNTL   ++  G+ 
Sbjct: 256 L-KGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKV 314

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A Q+L EM    + PN  T   ++ G+  EGN ++A++  + M+   +    V +  L
Sbjct: 315 LIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVL 374

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + G     + D        M+  GV    +T++ ++D     G + +   + ++M K GI
Sbjct: 375 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGI 434

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           +PDI  +S L  G+ R G  + A+ I+  + + G+ PN ++++T+I   C    ++  + 
Sbjct: 435 DPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIR 494

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           IYE M   G  P+  T+  L+    +A +   AEE ++ M   G+ P   +   + + + 
Sbjct: 495 IYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYG 554

Query: 427 AIGLAREAKRVL 438
           + G   +A  V 
Sbjct: 555 SSGEGLKAFSVF 566



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 201/407 (49%), Gaps = 1/407 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+L  +G   ++ Y+   + + G+ PT++TY T++    ++ RFK+ + L+  +   G+
Sbjct: 200 INVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGV 259

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D   +N +I+    S    +   + + M+     P   TYNTL+ G+ N GK   + +
Sbjct: 260 NADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQ 319

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M     + PN  T+N L+    S+ + +EA  + + M A G+    V+Y  L    
Sbjct: 320 LLNEM-LTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGL 378

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  E   A      M+ N V     T   ++ G CK G +++A+  L  M +  + P++
Sbjct: 379 CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDI 438

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +++LI GF  +       + +  +   G+ P+ + +ST++      G + +   I++ 
Sbjct: 439 VTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEA 498

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  G  PD   F++L     +AG+  +AE  +  M   G+ PN V F  +I+G+ ++ +
Sbjct: 499 MILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGE 558

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
             +A S++++M ++G +P   TY +LL G  +      AE+ L+ ++
Sbjct: 559 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQ 605



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 106/485 (21%), Positives = 212/485 (43%), Gaps = 37/485 (7%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA  + N + ++G  P ++TY+ L+    R  R K+   ++ ++ + G+ P+
Sbjct: 413 LCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPN 472

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I+++ +I  C   G + E ++I++ M   G  P   T+N L+      GK  E+ + ++
Sbjct: 473 GIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMR 532

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M+ D  + PN  +++ L+  + S     +A++V  +M   G  P   TY +L +   + 
Sbjct: 533 CMTSD-GILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    AE+ L  +QN     +   C  +++  CK GN++ A+     M +  + P+   +
Sbjct: 592 GHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTY 651

Query: 244 NSLIKGF----------LDIKDS-----------------DGVDKA---------LTLME 267
            SLI G           L  K++                 DG+ KA            M+
Sbjct: 652 TSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMD 711

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
           + G+  DVVT + ++D +S  G + K  ++  +M      P++  ++IL  GY +     
Sbjct: 712 KLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVS 771

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            +  +  SM   G+ P+ +   ++I G C +  ++  + I +     G+  +  T+  L+
Sbjct: 772 TSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLI 831

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS 447
                  +   A +++ VM   G+   K+T   +          +E++ VL    +   S
Sbjct: 832 SKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGIS 891

Query: 448 MPNKK 452
             ++K
Sbjct: 892 PESRK 896



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/485 (22%), Positives = 201/485 (41%), Gaps = 42/485 (8%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           + +G   EA  +F+ +  +G   T ++Y  L+  L +   F        +++++G+    
Sbjct: 344 ISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 403

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           I +  MI+   ++G +DEA+ +  +M   G  P   TY+ LI G+  VG+ + + +++  
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCR 463

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           + +   + PN   Y+ L+   C    ++E   +   M+  G  PD  T+N L  +  + G
Sbjct: 464 IYR-VGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAG 522

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +   AE+ +  M ++ + PN  +   +++GY   G    A      M ++  HP    + 
Sbjct: 523 KVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYG 582

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           SL+KG          +K L  ++      D V  +T++ A   +G + K   +F +MV+ 
Sbjct: 583 SLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQR 642

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG-VHPNVVMFTTVISGWCNAVKMQR 363
            I PD   ++ L  G  R G+   A          G + PN VM+T  + G   A + + 
Sbjct: 643 SILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKA 702

Query: 364 AMSIYEKMCEIGIN-----------------------------------PNLKTYETLLW 388
                ++M ++G+                                    PNL TY  LL 
Sbjct: 703 GFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLH 762

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKST-----IQLVADSWRAIGLAREAKRVLKSAEE 443
           GY + K    +  L + M   G+ P K T     + +   +   IGL      + +  E 
Sbjct: 763 GYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEV 822

Query: 444 DRQSM 448
           DR + 
Sbjct: 823 DRHTF 827



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/410 (23%), Positives = 181/410 (44%), Gaps = 8/410 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A  +F+ + + GH PT  TY +L+  L +     +    +  ++      D+++ 
Sbjct: 557 GEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMC 616

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I A  +SGN+D+A+ +F +M      P + TY +LI G    GK   ++   +    
Sbjct: 617 NTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEA 676

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
             N+ PN   Y   V         +  +    +M   G+  D VT N +   Y++ G+  
Sbjct: 677 RGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIE 736

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHPNLVVFNSL 246
           +   +LFEM N    PN  T  I++ GY K  ++  +   LYR   L  + P+ +   S+
Sbjct: 737 KTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSF-MLYRSMILSGILPDKLTCYSI 795

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           I G   I +S+ ++  L +++ F   GV+ D  TF+ ++    + G +    ++ + M  
Sbjct: 796 ILG---ICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTS 852

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GI  D +    +     R    Q++  +L  M K G+ P    +  +++G C    ++ 
Sbjct: 853 LGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKT 912

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           A  + E+M    I P       ++    +  +   A  LL+ M +  + P
Sbjct: 913 AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVP 962



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/366 (22%), Positives = 157/366 (42%), Gaps = 7/366 (1%)

Query: 27   PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
            P  + YT  V  + +  ++K+      +++K G+  D +  NAMI+  S  G +++   +
Sbjct: 682  PNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDL 741

Query: 87   FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
              +M +    P  +TYN L+ GY        S  L + M     + P+  T   ++   C
Sbjct: 742  LFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILS-GILPDKLTCYSIILGIC 800

Query: 147  SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
              N +E    ++   +  G++ D  T+N L       GE   A  M+  M +  +  ++ 
Sbjct: 801  ESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKN 860

Query: 207  TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
            TC  IVS   +    +++   L+ M +  + P    +  L+ G   + D   +  A  + 
Sbjct: 861  TCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGD---IKTAFVVK 917

Query: 267  EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            EE     + P  V  S ++ A +  G   +   +   M+K  + P I  F+ L   + + 
Sbjct: 918  EEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKN 977

Query: 324  GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
            G   +A  +   M   G+  ++V +  +I+G C    M  A  ++E+M   G   N+ TY
Sbjct: 978  GNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTY 1037

Query: 384  ETLLWG 389
            + L+ G
Sbjct: 1038 KALVGG 1043



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/329 (20%), Positives = 142/329 (43%), Gaps = 7/329 (2%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            GK  + H +   +  +   P L TY  L+   +++K   +   L   +   G+ PD +  
Sbjct: 733  GKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTC 792

Query: 68   NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             ++I    ES  ++  +KI +     G +    T+N LI      G+   +  ++ +M+ 
Sbjct: 793  YSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTS 852

Query: 128  DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
               +  +  T + +V      +  +E+  V+++M   GI P++  Y  L     + G+  
Sbjct: 853  -LGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIK 911

Query: 188  RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
             A  +  EM  +++ P       +V    K G  ++A   L  M ++++ P +  F +L+
Sbjct: 912  TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLM 971

Query: 248  KGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
              F     +  V +AL L   M   G+K D+V+++ ++    + G M    E+F++M + 
Sbjct: 972  HLFCK---NGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRD 1028

Query: 305  GIEPDIHVFSILAKGYVRAGEPQKAESIL 333
            G   ++  +  L  G +  G       I+
Sbjct: 1029 GFLANVTTYKALVGGILSQGTEFSGTDII 1057



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 104/233 (44%)

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
           I++  Y +EG ++D++     M     +P++   N+++   +   +   V   L  M + 
Sbjct: 128 ILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKR 187

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
            + PDV TF+ +++   + G   K   +   M K+G  P I  ++ +   Y + G  + A
Sbjct: 188 KICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAA 247

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             +L  M   GV+ +V  +  +I   C + +  +   +   M +  I+PN  TY TLL G
Sbjct: 248 IELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNG 307

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           +    +   A +LL  M   G+ P   T   + D   + G  +EA ++    E
Sbjct: 308 FSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMME 360



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 134/308 (43%), Gaps = 14/308 (4%)

Query: 16   IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
            ++  +I  G  P  +T  +++  +      +  L ++      G++ D   FN +I+ C 
Sbjct: 776  LYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCC 835

Query: 76   ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
             +G ++ A  +   M   G     +T + ++       + +ES  +L  MS+ + + P  
Sbjct: 836  ANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSK-QGISPES 894

Query: 136  RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            R Y  L+   C    I+ A+ V  +M+A  I P  V  + + RA A+ G+   A  +L  
Sbjct: 895  RKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRS 954

Query: 196  MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
            M   ++ P   +   ++  +CK GN+ +A+     M    +  +LV +N LI G     D
Sbjct: 955  MLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGD 1014

Query: 256  SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
                 +    M+  G   +V T+  ++      G++ +  E       +G   DI +  +
Sbjct: 1015 MAIAFELFEEMKRDGFLANVTTYKALV-----GGILSQGTEF------SG--TDIILKDL 1061

Query: 316  LAKGYVRA 323
            LA+G++ A
Sbjct: 1062 LARGFITA 1069



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/185 (21%), Positives = 84/185 (45%), Gaps = 1/185 (0%)

Query: 11   HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
             E+  + + + ++G  P    Y  L+  L R    K+   +  ++    + P ++  +AM
Sbjct: 876  QESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAM 935

Query: 71   INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
            + A ++ G  DEA  + + M      PT +++ TL+  +   G   E+L+L  +MS +  
Sbjct: 936  VRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMS-NCG 994

Query: 131  VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
            +K +  +YN+L+   C+K  +  A+ +  +M   G   +  TY  L       G  +   
Sbjct: 995  LKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGT 1054

Query: 191  QMLFE 195
             ++ +
Sbjct: 1055 DIILK 1059


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 212/444 (47%), Gaps = 9/444 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  +A  +F  + E G     + YTTL+  L +     +   +  ++ +  +
Sbjct: 496 VNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNL 555

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD++++N  IN     G   EA    ++M+ +G KP   TYNT+I      GK  ++LK
Sbjct: 556 LPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALK 615

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M +  ++KPN  TY+ L+       ++E+A  ++ +M +SG  P ++T+  + +A 
Sbjct: 616 LLNGMKR-SSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQAC 674

Query: 181 AQYGETYRAEQMLFE----MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
           +Q     R   ++ E    M N  +  +      +V   C  G    AM  L  M    +
Sbjct: 675 SQG----RRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGI 730

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P+ + FN+LI G       D        M   G+ P+V TF+T++    SAG +G+   
Sbjct: 731 APDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDM 790

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           + ++M K GIEP    + IL  GY +     +A  +   M   G  P V  +  +IS + 
Sbjct: 791 VLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFS 850

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
               M +A  ++ +M   G+ P   TY+ L+ G+ + +      + L+ M+EKG  P K 
Sbjct: 851 KVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKG 910

Query: 417 TIQLVADSWRAIGLAREAKRVLKS 440
           T+  ++ ++   G++ EA+R+LK+
Sbjct: 911 TLSSISRAFSKPGMSWEARRLLKN 934



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 212/463 (45%), Gaps = 42/463 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L  +GK  EA  +F   + + H P  +TYT L+ AL +         ++S++E+  +
Sbjct: 356 MDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSI 415

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNT---------------- 104
            P+ + F+++IN   + G V +A    ++MK+ G  P   TY T                
Sbjct: 416 SPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALD 475

Query: 105 -------------------LIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
                              L+ G    GK E++  L + M++ + V  +   Y  L+   
Sbjct: 476 VYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNE-RGVLLDHVNYTTLIDGL 534

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
               ++  A+ V  ++    + PDAV YN         G++  AE  L EMQ+  ++P++
Sbjct: 535 FKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQ 594

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   +++   +EG    A++ L  MK   + PNL+ +++LI G     ++  V+KA  L
Sbjct: 595 VTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLF---EAGAVEKAKYL 651

Query: 266 MEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           + E    G  P  +T   ++ A S         EI + M+ AG+  DI V++ L +    
Sbjct: 652 LNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCY 711

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G  +KA  +L  M   G+ P+ + F  +I G   +  +  A S Y++M   GI+PN+ T
Sbjct: 712 NGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVAT 771

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           + TLL G   A +   ++ +L  M+++G+ P   T  ++   +
Sbjct: 772 FNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGY 814



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 221/449 (49%), Gaps = 2/449 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N LV +G   +A      + E G  P ++TY T++    +    ++ L +  ++  +G+
Sbjct: 426 INGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGV 485

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + +  + ++++N   ++G +++A  +F++M + G       Y TLI G    G    + K
Sbjct: 486 EVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFK 545

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + Q +++ KN+ P+   YN+ +   C     +EA + + +M ++G++PD VTYNT+  A 
Sbjct: 546 VGQELTE-KNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQ 604

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++ G+T +A ++L  M+ + ++PN  T   ++ G  + G +E A   L  M      P  
Sbjct: 605 SREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTS 664

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +    +++     + SD + +    M   G+  D+  ++T++      G+  K   + ++
Sbjct: 665 LTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEE 724

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   GI PD   F+ L  G+ ++G    A S    M  +G+ PNV  F T++ G  +A +
Sbjct: 725 MSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGR 784

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  +  +  +M + GI P+  TY+ L+ GYG+      A  L   M  KG  PK ST   
Sbjct: 785 IGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNA 844

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMP 449
           +   +  +G+  +AK +     ++R  +P
Sbjct: 845 LISDFSKVGMMSQAKELFNEM-QNRGVLP 872



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 210/476 (44%), Gaps = 54/476 (11%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+   A  + + +  +G  P ++TYT  +    R+       SL  ++ + G+ PD +  
Sbjct: 223 GEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTL 282

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-QLMS 126
           +A++    + G   EA  +F++M+  G  P   TY  LI       +  ESL LL +++S
Sbjct: 283 SALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVS 342

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             + V  +   Y  L+   C +  I+EA ++    ++    P+ VTY  L  A  + G  
Sbjct: 343 --RGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNV 400

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             AEQ+L EM+   + PN  T   I++G  K G +  A  ++  MKE  + PN+V + ++
Sbjct: 401 DGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTV 460

Query: 247 IKG---------FLDI-----------------------KDSDGVDKALTL---MEEFGV 271
           I G          LD+                       K +  ++KA  L   M E GV
Sbjct: 461 IDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGV 520

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
             D V ++T++D     G +    ++  ++ +  + PD  V+++        G+ ++AES
Sbjct: 521 LLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAES 580

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
            L  M+  G+ P+ V + T+I+      K  +A+ +   M    I PNL TY TL+ G  
Sbjct: 581 FLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLF 640

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS 447
           EA    +A+ LL  M   G  P   T                 +RVL++  + R+S
Sbjct: 641 EAGAVEKAKYLLNEMSSSGFSPTSLT----------------HRRVLQACSQGRRS 680



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/485 (22%), Positives = 221/485 (45%), Gaps = 44/485 (9%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGM--KPDSILFNAMINACSESGNVDEAMKIF 87
           +T  T++  L R  R     +L   + + G     D + +N++++   + G+++ A  + 
Sbjct: 138 VTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVA 197

Query: 88  QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
           ++MK  G       YN+L+ G    G+ + +  ++  M +D  V+PN  TY + +  +C 
Sbjct: 198 ERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRD-GVEPNVVTYTMFIVEYCR 256

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
           +N++++A+++  +MV  G+ PD VT + L     + G    A  +  EM+     PN  T
Sbjct: 257 RNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVT 316

Query: 208 --------------------CGIIVSG---------------YCKEGNMEDAMRFLYRMK 232
                                G +VS                 CKEG +++A + ++R  
Sbjct: 317 YCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEA-KDMFRHA 375

Query: 233 ELEVH-PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
             + H PN V +  LI       + DG ++ L+ MEE  + P+VVTFS+I++     G +
Sbjct: 376 LSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWV 435

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
           GK  +   +M + GI+P++  +  +  G  +    + A  +   M   GV  N  +  ++
Sbjct: 436 GKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSL 495

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           ++G     K+++A +++ +M E G+  +   Y TL+ G  +      A ++ Q + EK +
Sbjct: 496 VNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNL 555

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNS 471
            P      +  +    +G ++EA+  L    E+ QS   K D++   ++   Q+     +
Sbjct: 556 LPDAVVYNVFINCLCMLGKSKEAESFL----EEMQSTGLKPDQVTYNTMIAAQSREGKTA 611

Query: 472 TFLQI 476
             L++
Sbjct: 612 KALKL 616



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 155/332 (46%), Gaps = 1/332 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  +A  + N +     +P LITY+TL+  L      +    L++++   G  P S+ 
Sbjct: 607 EGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLT 666

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
              ++ ACS+    D  ++I + M ++G     + YNTL++     G   +++ +L+ MS
Sbjct: 667 HRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMS 726

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             + + P+  T+N L+        ++ A++   +M+  GI P+  T+NTL       G  
Sbjct: 727 -GRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRI 785

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             ++ +L EM+   + P+  T  I+V+GY K+ N  +A+R    M      P +  +N+L
Sbjct: 786 GESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNAL 845

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I  F  +       +    M+  GV P   T+  ++  WS      + ++   DM + G 
Sbjct: 846 ISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGF 905

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
            P     S +++ + + G   +A  +L ++ K
Sbjct: 906 SPSKGTLSSISRAFSKPGMSWEARRLLKNLYK 937



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 161/386 (41%), Gaps = 50/386 (12%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D++ +N +++  SE G +     +  +M   G      T NT++ G    G+ + +  L 
Sbjct: 102 DTVSYNVVMSGFSEQGGLAPE-ALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160

Query: 123 QLMSQDKNVKPNDRT-YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           ++M +   +   D   +N LV  +C    +E A+ V  +M A G+  D V YN+L     
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSL----- 215

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
                                         V+G C+ G ++ A   +  MK   V PN+V
Sbjct: 216 ------------------------------VAGLCRAGEVDAARDMVDTMKRDGVEPNVV 245

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
            +   I   ++    + VD A +L EE    GV PDVVT S ++      G   +   +F
Sbjct: 246 TYTMFI---VEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALF 302

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
            +M K G  P+   + +L     +A    ++ S+L  +   GV  +++M+T ++   C  
Sbjct: 303 REMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKE 362

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            K+  A  ++         PN  TY  L+    +A     AE++L  MEEK + P   T 
Sbjct: 363 GKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTF 422

Query: 419 Q-----LVADSWRAIGLAREAKRVLK 439
                 LV   W  +G A +  R +K
Sbjct: 423 SSIINGLVKRGW--VGKATDYMREMK 446



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 3/205 (1%)

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N ++ GF + +     +  L  M + GV  D VT +T++      G + +   + + 
Sbjct: 104 VSYNVVMSGFSE-QGGLAPEALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEV 162

Query: 301 MVKAGIEPDIHV--FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           MV+ G    + V  ++ L  GY + G+ + A ++   M+  GV  +VV + ++++G C A
Sbjct: 163 MVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRA 222

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            ++  A  + + M   G+ PN+ TY   +  Y        A  L + M  KGV P   T+
Sbjct: 223 GEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTL 282

Query: 419 QLVADSWRAIGLAREAKRVLKSAEE 443
             +       G   EA  + +  E+
Sbjct: 283 SALVGGLCKDGRFSEAYALFREMEK 307


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 225/472 (47%), Gaps = 38/472 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA      ++E G  PTLITY+ LV  LT+ KR      ++ ++ + G  P+ I++
Sbjct: 301 GRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVY 360

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-QLMS 126
           N +I++  E+G++++A++I   M   G   T+STYNTLIKGY   G+ + + +LL +++S
Sbjct: 361 NNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLS 420

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
              NV  N  ++  ++   CS +  + A   V +M+   + P      TL     ++G+ 
Sbjct: 421 IGFNV--NQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 478

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR-------------------- 226
            +A ++  +  N     + +T   ++ G C+ G +E+  R                    
Sbjct: 479 SKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTL 538

Query: 227 ---------------FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
                          F+  M +  + P+   ++ LI+G L++   +   +     +  G+
Sbjct: 539 ISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGM 598

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            PDV T+S ++D    A    + Q++FD+M+   ++P+  V++ L   Y R+G    A  
Sbjct: 599 IPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALE 658

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +   M+  G+ PN   +T++I G     +++ A  + E+M   G+ PN+  Y  L+ GYG
Sbjct: 659 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYG 718

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           +  Q  + E LL+ M  K V P K T  ++   +   G   EA R+L    E
Sbjct: 719 KLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMRE 770



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 215/452 (47%), Gaps = 36/452 (7%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  P +  +TT + A  +  + +  + L SK+E+ G+ P+ + +N +I+    SG  DE
Sbjct: 246 KGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDE 305

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A    +KM + G +PT  TY+ L+KG     +  ++  +L+ M++ K   PN   YN L+
Sbjct: 306 AFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTE-KGFPPNVIVYNNLI 364

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
            +     S+ +A  +   MV+ G+   + TYNTL + Y + G+   AE++L EM +    
Sbjct: 365 DSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFN 424

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI--------------- 247
            N+ +   ++   C     + A+RF+  M    + P   +  +LI               
Sbjct: 425 VNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVEL 484

Query: 248 ------KGFL-DIKDSD----GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC-- 294
                 KGFL D K S+    G+ +A  L E F ++ +++    +MD  S   L+  C  
Sbjct: 485 WLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCG 544

Query: 295 ----QEIF---DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
                E F   D+MVK G++PD + +SIL +G +   + ++A       ++ G+ P+V  
Sbjct: 545 NKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYT 604

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           ++ +I G C A + +    ++++M    + PN   Y  L+  Y  + +   A EL + M+
Sbjct: 605 YSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMK 664

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            KG+ P  +T   +      I    EAK +L+
Sbjct: 665 HKGISPNSATYTSLIKGMSIISRVEEAKLLLE 696



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 172/363 (47%), Gaps = 7/363 (1%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           ++T+++  L     F S L  + ++    M P   L   +I+   + G   +A++++ K 
Sbjct: 429 SFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKF 488

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
            + G    T T N L+ G    GK EE  ++ Q     +    +  +YN L+   C    
Sbjct: 489 LNKGFLVDTKTSNALLHGLCEAGKLEEGFRI-QKEILGRGFVMDRVSYNTLISGCCGNKK 547

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           ++EA+  + +MV  G++PD  TY+ L R      +   A Q   + + N + P+  T  +
Sbjct: 548 LDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSV 607

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF- 269
           ++ G CK    E+  +    M    + PN VV+N LI  +     S  +  AL L E+  
Sbjct: 608 MIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCR---SGRLSMALELREDMK 664

Query: 270 --GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
             G+ P+  T+++++   S    + + + + ++M   G+EP++  ++ L  GY + G+  
Sbjct: 665 HKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMV 724

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           K E +L  M    VHPN + +T +I G+     +  A  +  +M E GI P+  TY+  +
Sbjct: 725 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFI 784

Query: 388 WGY 390
           +GY
Sbjct: 785 YGY 787



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 149/321 (46%), Gaps = 1/321 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK  +A  ++   + +G      T   L+  L    + +    +  ++   G   D
Sbjct: 472 LCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMD 531

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +I+ C  +  +DEA     +M   G KP   TY+ LI+G  N+ K EE+++   
Sbjct: 532 RVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWG 591

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
              ++  + P+  TY++++   C     EE   +  +M+++ +QP+ V YN L  AY + 
Sbjct: 592 DCKRNGMI-PDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRS 650

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A ++  +M++  + PN  T   ++ G      +E+A   L  M+   + PN+  +
Sbjct: 651 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHY 710

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            +LI G+  +     V+  L  M    V P+ +T++ ++  ++  G + +   +  +M +
Sbjct: 711 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMRE 770

Query: 304 AGIEPDIHVFSILAKGYVRAG 324
            GI PD   +     GY++ G
Sbjct: 771 KGIVPDSITYKEFIYGYLKQG 791



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 138/315 (43%), Gaps = 7/315 (2%)

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIE---EAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           +K + P+  T NIL+ +       +   EA++VV K    G+ PD   + T   A+ + G
Sbjct: 211 NKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVCK----GVSPDVYLFTTAINAFCKGG 266

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +   A ++  +M+   V PN  T   ++ G    G  ++A  F  +M E  V P L+ ++
Sbjct: 267 KVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYS 326

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            L+KG    K        L  M E G  P+V+ ++ ++D+   AG + K  EI D MV  
Sbjct: 327 ILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSK 386

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+      ++ L KGY ++G+   AE +L  M   G + N   FT+VI   C+      A
Sbjct: 387 GLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSA 446

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           +    +M    ++P      TL+ G  +  +  +A EL      KG      T   +   
Sbjct: 447 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHG 506

Query: 425 WRAIGLAREAKRVLK 439
               G   E  R+ K
Sbjct: 507 LCEAGKLEEGFRIQK 521



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 105/203 (51%), Gaps = 1/203 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P + TY+ ++    + +R +    L  ++  + ++P+++++N +I A   SG +  A
Sbjct: 597 GMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMA 656

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +++ + MK  G  P ++TY +LIKG   + + EE+  LL+ M  +  ++PN   Y  L+ 
Sbjct: 657 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRME-GLEPNVFHYTALID 715

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +     + +   ++ +M +  + P+ +TY  +   YA+ G    A ++L EM+   + P
Sbjct: 716 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVP 775

Query: 204 NERTCGIIVSGYCKEGNMEDAMR 226
           +  T    + GY K+G +  A +
Sbjct: 776 DSITYKEFIYGYLKQGGVLQAFK 798



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 84/371 (22%), Positives = 156/371 (42%), Gaps = 18/371 (4%)

Query: 59  GMKPD----SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK 114
           GM P     +IL  +++ A +E     EA  +  K    G  P    + T I  +   GK
Sbjct: 213 GMFPSKTTCNILLTSLVRA-TEFQKCCEAFHVVCK----GVSPDVYLFTTAINAFCKGGK 267

Query: 115 PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYN 174
            EE+++L   M ++  V PN  TYN ++         +EA+    KMV  G++P  +TY+
Sbjct: 268 VEEAIELFSKM-EEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYS 326

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
            L +   +      A  +L EM      PN      ++    + G++  A+     +K+L
Sbjct: 327 ILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAI----EIKDL 382

Query: 235 EVHPNLVV----FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
            V   L +    +N+LIKG+     +D  ++ L  M   G   +  +F++++    S  +
Sbjct: 383 MVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHM 442

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
                    +M+   + P   + + L  G  + G+  KA  +       G   +      
Sbjct: 443 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNA 502

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           ++ G C A K++    I +++   G   +  +Y TL+ G    K+   A   +  M +KG
Sbjct: 503 LLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKG 562

Query: 411 VRPKKSTIQLV 421
           ++P   T  ++
Sbjct: 563 LKPDNYTYSIL 573



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 1/148 (0%)

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           ++F  +   G+ P     +IL    VRA E QK       + K GV P+V +FTT I+ +
Sbjct: 204 DVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVCK-GVSPDVYLFTTAINAF 262

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C   K++ A+ ++ KM E G+ PN+ TY T++ G G + +   A    + M E+GV P  
Sbjct: 263 CKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTL 322

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEE 443
            T  ++           +A  VLK   E
Sbjct: 323 ITYSILVKGLTKAKRIGDAYCVLKEMTE 350



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 50/109 (45%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +   +  EG  P +  YT L+    +  +   +  L+ ++    + P+ I +  MI
Sbjct: 690 EAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 749

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
              +  GNV EA ++  +M++ G  P + TY   I GY   G   ++ K
Sbjct: 750 GGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQAFK 798


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 211/422 (50%), Gaps = 12/422 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK       F  +I  G +PT+ TY  ++  + ++   ++   L  +++  G+ PD++ +
Sbjct: 112 GKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTY 171

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N+MI+   + G +D+ +  F++MK   C+P   TYN+LI  +   GK  + L+  + M Q
Sbjct: 172 NSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQ 231

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              +KPN  +Y+ LV A+C ++ +++A      M   G  P+  TY +L  A  + G   
Sbjct: 232 -SGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLS 290

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++  EM    V  N  T   ++ G C    M++A +   +M    V PNL  +N+LI
Sbjct: 291 DAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALI 350

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGL--MGKCQEIFDDMV 302
            GF+  K+   +D+AL L+ E    G++PD++ + T +  W   GL  +   + + ++M 
Sbjct: 351 HGFVKAKN---MDRALELLNELKGRGIQPDLLLYGTFI--WGLCGLEKIEAAKVVMNEMQ 405

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           + GI+ +  +++ L   Y ++G P +   +L  M++      VV F  +I G C    + 
Sbjct: 406 ENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVS 465

Query: 363 RAMSIYEKMC-EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           +A+  + +M  + G+ PN   Y  ++ G  +  Q   A  L + M ++G+ P ++    +
Sbjct: 466 KAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSL 525

Query: 422 AD 423
            D
Sbjct: 526 MD 527



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/464 (22%), Positives = 217/464 (46%), Gaps = 37/464 (7%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G    A  +F  +   G  P  +TY +++    +  R    +    +++    +PD I 
Sbjct: 146 EGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVIT 205

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N++IN   +SG + + ++ +++MK SG KP   +Y+TL+  +      ++++K    M 
Sbjct: 206 YNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMR 265

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +  +V PN+ TY  LV A C   ++ +A+ +  +M+  G++ + VTY  L          
Sbjct: 266 RVGHV-PNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERM 324

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             AE++  +M    V PN  +   ++ G+ K  NM+ A+  L  +K   + P+L+++ + 
Sbjct: 325 KEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTF 384

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG-------LMGKCQE--- 296
           I G   ++  +     +  M+E G+K + + ++T+MDA+  +G       L+ + QE   
Sbjct: 385 IWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDH 444

Query: 297 ---------IFDDMVKA-----------------GIEPDIHVFSILAKGYVRAGEPQKAE 330
                    + D + K                  G++P+  V++ +  G  +  + + A 
Sbjct: 445 EVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAAT 504

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           ++   M + G+ P+   +T+++ G      M  A+++ +KM EIG+  +L  Y +L+WG+
Sbjct: 505 TLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGF 564

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
            +  Q  +A   L+ M  + + P +     V      +G   EA
Sbjct: 565 SQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEA 608



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/451 (23%), Positives = 210/451 (46%), Gaps = 2/451 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P    +  L + L      +      SK+++  + P +   N +++  ++ G  D   + 
Sbjct: 61  PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F+ M  +G KPT  TYN +I      G  E +  L + M + + + P+  TYN ++  + 
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEM-KFRGLIPDTVTYNSMIDGYG 179

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               +++      +M +   +PD +TYN+L   + + G+  +  +   EM+ + ++PN  
Sbjct: 180 KVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVV 239

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           +   +V  +CKE  M+ A++F   M+ +   PN   + SL+     I +     +    M
Sbjct: 240 SYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEM 299

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            E GV+ +VVT++ ++D    A  M + +++F  MV AG+ P++  ++ L  G+V+A   
Sbjct: 300 LEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNM 359

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +A  +L  ++  G+ P+++++ T I G C   K++ A  +  +M E GI  N   Y TL
Sbjct: 360 DRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTL 419

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
           +  Y ++  P     LL+ M+E        T  ++ D      L  +A         D  
Sbjct: 420 MDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFG 479

Query: 447 SMPNKKDEIA-VESIHRKQNLSASNSTFLQI 476
             PN     A ++ + ++  + A+ + F Q+
Sbjct: 480 LQPNAAVYTAMIDGLCKENQVKAATTLFEQM 510



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/380 (22%), Positives = 182/380 (47%), Gaps = 2/380 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N     GK  +    +  + + G +P +++Y+TLV A  ++   +  +     + + G 
Sbjct: 210 INCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGH 269

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   + ++++A  + GN+ +A ++  +M + G +    TY  LI G  +  + +E+ K
Sbjct: 270 VPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEK 329

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M     V PN  +YN L+  +    +++ A  ++ ++   GIQPD + Y T     
Sbjct: 330 LFGKMVT-AGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGL 388

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
               +   A+ ++ EMQ N ++ N      ++  Y K GN  + +  L  M+EL+    +
Sbjct: 389 CGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTV 448

Query: 241 VVFNSLIKGFLDIK-DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           V F  LI G    K  S  +D    +  +FG++P+   ++ ++D       +     +F+
Sbjct: 449 VTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFE 508

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            M + G+ PD   ++ L  G ++ G   +A ++   M + G+  +++ +T+++ G+    
Sbjct: 509 QMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCN 568

Query: 360 KMQRAMSIYEKMCEIGINPN 379
           ++Q+A S  E+M    I P+
Sbjct: 569 QLQKARSFLEEMIGEEILPD 588


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 121/492 (24%), Positives = 224/492 (45%), Gaps = 54/492 (10%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++IL  +GK  EA+ +   +I+ G    ++TY+TL+  L  + R      L   ++K G 
Sbjct: 354 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 413

Query: 61  KPDSILFNAMINACSESGNV---------------------------------------- 80
           +PD+I +  ++    ++GN+                                        
Sbjct: 414 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 473

Query: 81  -DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
            DEA ++F++MK  G  P   +Y TLI G+   GK E++  L   M  D  ++P+  T +
Sbjct: 474 EDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEM-LDVGIQPDVTTSS 532

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           +L+   C K  + EA  ++  ++  G   D VT  TL +         +A Q+  +MQ  
Sbjct: 533 VLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKL 592

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE------LEVHPNLVVFNSLIKGFLDI 253
              PN  TC  ++ G C+ GN++ A+     M        +   PN + ++ +I G    
Sbjct: 593 GCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKC 652

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
              D   +    M+  GV PDV+++++++  +  +G     + +F++MV  G++PD+  F
Sbjct: 653 GREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTF 712

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           S+L     + G+  +A  +L  M + G  PN V +TT++ G C   ++  A  ++ KM +
Sbjct: 713 SVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQK 772

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELL-QVMEEKG-----VRPKKSTIQLVADSWRA 427
           +G  P++ TY TL+ G  +      A EL  +++ + G      +P   +  ++ D    
Sbjct: 773 LGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCK 832

Query: 428 IGLAREAKRVLK 439
            G   EA+ + K
Sbjct: 833 HGREDEARELFK 844



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 204/414 (49%), Gaps = 19/414 (4%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  +FN +++ G +P + T + L+  L ++ +      L+  V + G   D +  
Sbjct: 507 GKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTC 566

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             ++        + +A ++F KM+  GC P   T  TL+KG    G  + +L+L + M  
Sbjct: 567 TTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLS 626

Query: 128 DK-----NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           D      N KPN  +Y+I++   C     +EA  +  +M A G+ PD ++Y +L   + +
Sbjct: 627 DTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCR 686

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+   A+ +  EM +  V+P+  T  +++   CKEG + +A   L  M +    PN V 
Sbjct: 687 SGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVT 746

Query: 243 FNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           + +L+KG      +D + +A  L   M++ G  PDVVT+ T+M      G +    E+  
Sbjct: 747 YTTLVKGLCM---NDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHK 803

Query: 300 DMVK------AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
            M+          +PD+  +SI+  G  + G   +A  +   M+  GV PNV+ +T++I 
Sbjct: 804 KMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIH 863

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           G+C + K++ A  ++ +M + G+  N  TY  ++ G+ +  Q  +A  L Q ME
Sbjct: 864 GFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKME 915



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 201/398 (50%), Gaps = 14/398 (3%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +PTLI+Y+ ++  L + +R      L  +++  GM PD I + ++I+    SG  ++A  
Sbjct: 162 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKC 221

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +F +M D G +P  +T   LI  +   GK  E+ +LL++M   +    +  TY+ L++  
Sbjct: 222 LFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVH-RGCILDIVTYSTLIKGL 280

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ----- 200
           C K+ I EA  +   M   G +PDA+ Y TL +   Q G+   A  +  EM N+      
Sbjct: 281 CMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGI 340

Query: 201 --VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
             +RP+  T  +++   CKEG + +A   L  M +     ++V +++LIKG         
Sbjct: 341 KCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISE 400

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC----QEIFDDMVKAGI--EPDIHV 312
                  M++ G +PD +T+ T+M      G +       QE+ +D  + GI  +P +  
Sbjct: 401 ATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLIS 460

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           +SI+  G  +     +A  +   M+  G+ P+V+ +TT+I G+C + K ++A  ++ +M 
Sbjct: 461 YSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEML 520

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           ++GI P++ T   L+    +  +   A +LL+V+ ++G
Sbjct: 521 DVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRG 558



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 215/435 (49%), Gaps = 26/435 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++IL  +GK  EA+ +   +I+ G    ++TY+TL+  L  + R      L   ++K G 
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKM-KDSG-----CKPTTSTYNTLIKGYGNVGK 114
           +PD+I +  ++    ++GN++ A+++ Q+M  D+G     CKPT  +Y+ +I G     +
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 115 PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYN 174
            +E+ +L + M + + + P+  +Y  L+  +C     E+A  +  +M+  GIQPD  T  
Sbjct: 181 EDEARELFKEM-KAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSG 239

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
            L   + + G+   A ++L  M +     +  T   ++ G C +  + +A +    MK+L
Sbjct: 240 VLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKL 299

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE-------FGVK---PDVVTFSTIMDA 284
              P+ + + +L+KG      +  ++ AL L +E       +G+K   PDV T S ++D 
Sbjct: 300 GCRPDAIAYGTLMKGLC---QTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDI 356

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
               G + +  E+ + M++ G   DI  +S L KG        +A  +  SM+K G  P+
Sbjct: 357 LCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPD 416

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCE------IGINPNLKTYETLLWGYGEAKQPWR 398
            + + T++ G C    +  A+ ++++M        I   P L +Y  ++ G  + ++   
Sbjct: 417 AITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDE 476

Query: 399 AEELLQVMEEKGVRP 413
           A EL + M+ +G+ P
Sbjct: 477 ARELFEEMKAQGIMP 491



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 209/450 (46%), Gaps = 18/450 (4%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  +FN +++ G +P + T   L+    ++ +      L+  +   G   D + +
Sbjct: 214 GKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTY 273

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +I        + EA ++F  MK  GC+P    Y TL+KG    GK   +L L Q M  
Sbjct: 274 STLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLN 333

Query: 128 D------KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           D      K ++P+  T ++L+   C +  + EA  ++  M+  G   D VTY+TL +   
Sbjct: 334 DTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLC 393

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE------LE 235
                  A  +   MQ    RP+  T G ++ G C+ GN+  A++    M        ++
Sbjct: 394 MEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIK 453

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
             P L+ ++ +I G    +  D   +    M+  G+ PDV++++T++  +  +G   K +
Sbjct: 454 CKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAK 513

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
            +F++M+  GI+PD+   S+L     + G+  +A  +L  + + G   +VV  TT++ G 
Sbjct: 514 CLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGL 573

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK------ 409
           C   ++ +A  ++ KM ++G  PN+ T  TL+ G  ++     A EL + M         
Sbjct: 574 CMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGI 633

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             +P   +  ++ D     G   EA+ + K
Sbjct: 634 NCKPNAISYSIIIDGLCKCGREDEARELFK 663



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 198/434 (45%), Gaps = 48/434 (11%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +PTLI+Y+ ++  L + +R      L  +++  G+ PD I +  +I+    SG  ++A  
Sbjct: 455 KPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 514

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +F +M D G +P  +T + LI      GK  E+ KLL+++ Q +    +  T   LV+  
Sbjct: 515 LFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQ-RGCILDVVTCTTLVKGL 573

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN------ 199
           C K+ I +A  +  KM   G  P+ VT  TL +   Q G    A ++   M ++      
Sbjct: 574 CMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGI 633

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
             +PN  +  II+ G CK G  ++A      MK L V P+++ + SLI GF         
Sbjct: 634 NCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDA 693

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
                 M + GV+PDV TFS ++D     G + +  E+ + M++ G  P+   ++ L KG
Sbjct: 694 KYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKG 753

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM-------- 371
                   +A  +   M+K G  P+VV + T++ G C    ++ A+ +++KM        
Sbjct: 754 LCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYG 813

Query: 372 -----------------CE----------------IGINPNLKTYETLLWGYGEAKQPWR 398
                            C+                +G+ PN+ +Y +L+ G+  + +   
Sbjct: 814 TNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLED 873

Query: 399 AEELLQVMEEKGVR 412
           A+ L   M ++GV+
Sbjct: 874 AKHLFNEMVDQGVQ 887



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 194/383 (50%), Gaps = 15/383 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L  KGK  EA+ +   +I+ G    ++T TTLV  L  + R      L  K++K G 
Sbjct: 535 IDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGC 594

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDS------GCKPTTSTYNTLIKGYGNVGK 114
            P+ +    ++    +SGN+  A+++ + M          CKP   +Y+ +I G    G+
Sbjct: 595 MPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGR 654

Query: 115 PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYN 174
            +E+ +L + M +   V P+  +Y  L+  +C     ++A  +  +MV  G+QPD  T++
Sbjct: 655 EDEARELFKEM-KALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFS 713

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
            L     + G+   A ++L  M      PN  T   +V G C    + +A +   +M++L
Sbjct: 714 VLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKL 773

Query: 235 EVHPNLVVFNSLIKGFL---DIKDSDGVD-KALTLMEEFGV--KPDVVTFSTIMDAWSSA 288
              P++V + +L+KG     +IK +  +  K L+   ++G   KPDV+++S I+D     
Sbjct: 774 GCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKH 833

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
           G   + +E+F +M   G+ P++  ++ L  G+ R+G+ + A+ +   M   GV  N V +
Sbjct: 834 GREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTY 893

Query: 349 TTVISGWCNAVKMQRAMSIYEKM 371
           + +I G+C   ++ +A+  ++KM
Sbjct: 894 SVMIHGFCKEGQIDKAL--FQKM 914



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 174/374 (46%), Gaps = 23/374 (6%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG---------CKPTTSTYNTLIKGY 109
           G+ PDS  FN +IN       V+E +     +   G          +P  +T + LI   
Sbjct: 5   GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64

Query: 110 GNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
              GK  E+ +LL++M Q +    +  TY+ L++  C ++ I EA  +   M   G +PD
Sbjct: 65  CKEGKVIEANELLEVMIQ-RGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPD 123

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNN------QVRPNERTCGIIVSGYCKEGNMED 223
           A+TY TL +   Q G    A Q+  EM N+      + +P   +  II+ G CK+   ++
Sbjct: 124 AITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDE 183

Query: 224 AMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD 283
           A      MK   + P+++ + SLI GF      +        M + G++PDV T   ++D
Sbjct: 184 ARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLID 243

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
            +   G + +  E+ + MV  G   DI  +S L KG        +A  +  SM+K G  P
Sbjct: 244 MFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRP 303

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMC----EIGIN---PNLKTYETLLWGYGEAKQP 396
           + + + T++ G C   K+  A+ ++++M     + GI    P++ T   L+    +  + 
Sbjct: 304 DAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKV 363

Query: 397 WRAEELLQVMEEKG 410
             A ELL+VM ++G
Sbjct: 364 IEANELLEVMIQRG 377


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 215/451 (47%), Gaps = 12/451 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P ++T+ TL+  L R   F+ +  +++++ + G  PD  ++  +I+   + G+++ A +I
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M   G KP    YNT++KG  +  + +E+ +LL  M Q K+   +D T+NILV  +C
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ-KDCPLDDVTFNILVDFFC 367

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               ++    ++ +M++ G  PD +TY T+   + + G    A  +L  M +   +PN  
Sbjct: 368 QNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTV 427

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           +  I++ G C  G   DA   + +M +    PN V FN+LI  FL  K    V++A+ L+
Sbjct: 428 SYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN-FLCKKGL--VEQAIELL 484

Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           ++    G  PD++++ST++D    AG   +  E+ + MV  GI P+  ++S +A    R 
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G   K   +  +++   +  + V++  VIS  C   +  RA+  +  M   G  PN  TY
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             L+ G         A+ELL  +  +G   K         +       ++ +  L SA +
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGISNCTQENGKQKCEENLTSAVD 664

Query: 444 DRQSMPNKKDEIAVESIHRKQNLSASNSTFL 474
           +   +P     I +      QNL      FL
Sbjct: 665 NNYKLP-----IEILGFLEIQNLRPGEKQFL 690



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 205/432 (47%), Gaps = 6/432 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  +A  + + +  +G  P    Y  ++ A  R   F++ + ++  +   G   D
Sbjct: 121 LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLD 180

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +   N ++NA  E G VDEA+ + +K+   GC+    +YN ++KG     +  +  +L+ 
Sbjct: 181 TGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMD 240

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +  +  PN  T+N L+   C     E    V+ +M   G  PD   Y T+     + 
Sbjct: 241 EMVR-VDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKE 299

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A ++L  M +  ++PN      ++ G C     ++A   L  M + +   + V F
Sbjct: 300 GHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTF 359

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N L+  F      D V + L  M   G  PDV+T++T+++ +   GL+ +   +   M  
Sbjct: 360 NILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G +P+   ++I+ KG   AG    AE +++ M + G  PN V F T+I+  C    +++
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+ + ++M   G +P+L +Y T++ G G+A +   A ELL VM  KG+ P       +  
Sbjct: 480 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNT-----IIY 534

Query: 424 SWRAIGLAREAK 435
           S  A  L+RE +
Sbjct: 535 SSIACALSREGR 546



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/438 (23%), Positives = 208/438 (47%), Gaps = 1/438 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  +G   EA  +   L   G    +++Y  ++  L   KR+  +  L+ ++ +   
Sbjct: 188 LNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDC 247

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + FN +I     +G  +   ++  +M + GC P    Y T+I G    G  E + +
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANE 307

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M     +KPN   YN +++  CS    +EA  ++ +M       D VT+N L   +
Sbjct: 308 ILNRMPS-YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G   R  ++L +M ++   P+  T   +++G+CKEG +++A+  L  M      PN 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +  ++KG          ++ ++ M + G  P+ VTF+T+++     GL+ +  E+   
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  G  PD+  +S +  G  +AG+ ++A  +L  M   G+ PN ++++++        +
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGR 546

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           + + + +++ + +  I  +   Y  ++    +  +  RA +    M   G  P +ST  +
Sbjct: 547 VNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTM 606

Query: 421 VADSWRAIGLAREAKRVL 438
           +     + GLA+EA+ +L
Sbjct: 607 LIKGLASEGLAKEAQELL 624



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 96/411 (23%), Positives = 188/411 (45%), Gaps = 4/411 (0%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
           ++ Y  +VA   R  +  +   L + V    + P++  F  ++      G + +A+++  
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
           +M   GC P    Y+ +++     G    S+++L+ M   K    +    N+++ A C +
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM-HAKGCTLDTGNCNLVLNAICEQ 194

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
             ++EA  ++ K+   G + D V+YN + +           E+++ EM      PN  T 
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             ++   C+ G  E     L +M E    P++ ++ ++I G       +  ++ L  M  
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
           +G+KP+VV ++T++    SA    + +E+  +M +     D   F+IL   + + G   +
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
              +L  M  +G  P+V+ +TTVI+G+C    +  A+ + + M   G  PN  +Y  +L 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           G   A +   AEEL+  M ++G  P   T   + +     GL  +A  +LK
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/207 (19%), Positives = 81/207 (39%)

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           V P+  TF  ++    + G +    E+ D+M   G  P   ++ ++ +   R+G  + + 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +L +M   G   +      V++  C    +  A+ +  K+   G   ++ +Y  +L G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
             AK+    EEL+  M      P   T   +       GL      VL    E   +   
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 451 KKDEIAVESIHRKQNLSASNSTFLQIP 477
           +     ++ I ++ +L  +N    ++P
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMP 313


>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 942

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 207/413 (50%), Gaps = 42/413 (10%)

Query: 50  SLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY 109
           +L+ ++E++G+     +++ M++  +   +  + + +F+++K+ G  PT  TY  LI  Y
Sbjct: 436 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINLY 495

Query: 110 GNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
             VGK  ++L++ ++M +++ VK N +TY++++  +        A+ V   MV  G++PD
Sbjct: 496 TKVGKISKALEVSRVM-KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 554

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
            + YN +  A+   G   RA Q + EMQ  + RP  RT   I++G+ K G+M  ++    
Sbjct: 555 VILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFD 614

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWS 286
            M+     P +  FN+LI G ++ +    ++KA+ +++E    GV  +  T++ IM  ++
Sbjct: 615 MMRRCGCVPTVHTFNALINGLVEKRQ---MEKAVEILDEMTLAGVSANEHTYTKIMQGYA 671

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDI-----------------------------------H 311
           S G  GK  E F  +   G+E DI                                    
Sbjct: 672 SVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 731

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
           V++IL  G+ R G+  +A  ++  M+K GV P++  +T+ IS    A  M RA    E+M
Sbjct: 732 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM 791

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             +G+ PN+KTY TL+ G+  A  P +A    + M+  G++P K+    +  S
Sbjct: 792 EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAVGLKPDKAVYHCLLTS 844



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 197/388 (50%), Gaps = 7/388 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+    GK  +A  +   + EEG +  L TY+ ++    + K + +  ++   + K+GM
Sbjct: 492 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 551

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD IL+N +I A    GN+D A++  ++M+    +PTT T+  +I G+   G    SL+
Sbjct: 552 KPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLE 611

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +  +M +   V P   T+N L+     K  +E+A  ++ +M  +G+  +  TY  + + Y
Sbjct: 612 VFDMMRRCGCV-PTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 670

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A  G+T +A +    +QN  +  +  T   ++   CK G M+ A+     M    +  N 
Sbjct: 671 ASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 730

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            V+N LI G+    D       +  M++ GVKPD+ T+++ + A S AG M +  +  ++
Sbjct: 731 FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 790

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G++P+I  ++ L KG+ RA  P+KA S    M+  G+ P+  ++  +++   +   
Sbjct: 791 MEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAVGLKPDKAVYHCLLTSLLSRAS 850

Query: 361 MQRA------MSIYEKMCEIGINPNLKT 382
           +  A      M+I ++M E G+  ++ T
Sbjct: 851 IAEAYIYSGVMTICKEMVEAGLIVDMGT 878



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 89/393 (22%), Positives = 180/393 (45%), Gaps = 5/393 (1%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
            E+ ++P+   +  +V    R+           ++   G+ P S ++ ++I+A +   ++
Sbjct: 302 FEKINKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDM 361

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP--NDRTY 138
           +EA+   +KMK+ G + +  TY+ ++ G+   G  E +        + K +    N   Y
Sbjct: 362 EEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAA---DHWFDEAKRIHKTLNASIY 418

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
             ++ A C   ++E A  +V +M   GI      Y+T+   Y    +  +   +   ++ 
Sbjct: 419 GKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKE 478

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
               P   T G +++ Y K G +  A+     MKE  V  NL  ++ +I GF+ +KD   
Sbjct: 479 CGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWAN 538

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
                  M + G+KPDV+ ++ I+ A+   G M +  +   +M K    P    F  +  
Sbjct: 539 AFAVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIN 598

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           G+ ++G+ +++  +   MR+ G  P V  F  +I+G     +M++A+ I ++M   G++ 
Sbjct: 599 GFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSA 658

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           N  TY  ++ GY       +A E    ++ +G+
Sbjct: 659 NEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 691



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 98/446 (21%), Positives = 199/446 (44%), Gaps = 36/446 (8%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  H A   F  +   G  PT   YT+L+ A    +  +  LS + K++++G++   + 
Sbjct: 323 RGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVT 382

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ ++   S++GN + A   F + K        S Y  +I  +      E +  L++ M 
Sbjct: 383 YSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREM- 441

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +++ +      Y+ ++  +      ++   V  ++   G  P  VTY  L   Y + G+ 
Sbjct: 442 EEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINLYTKVGKI 501

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A ++   M+   V+ N +T  ++++G+ K  +  +A      M +  + P+++++N++
Sbjct: 502 SKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNI 561

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I  F  + + D   + +  M++   +P   TF  I++ ++ +G M +  E+FD M + G 
Sbjct: 562 IAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRCGC 621

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW----------- 355
            P +H F+ L  G V   + +KA  IL  M   GV  N   +T ++ G+           
Sbjct: 622 VPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFE 681

Query: 356 ------------------------CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
                                   C + +MQ A+++ ++M    I  N   Y  L+ G+ 
Sbjct: 682 YFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA 741

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKST 417
                W A +L+Q M+++GV+P   T
Sbjct: 742 RRGDVWEAADLIQQMKKEGVKPDIHT 767



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 65/322 (20%), Positives = 142/322 (44%), Gaps = 35/322 (10%)

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KP+   + ++V+ +  +  +  A     +M A GI P +  Y +L  AYA   +   A  
Sbjct: 307 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALS 366

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEG-------------------------------- 219
            + +M+   +  +  T  +IV G+ K G                                
Sbjct: 367 CVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHC 426

Query: 220 ---NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
              NME A   +  M+E  +   + ++++++ G+  + D          ++E G  P VV
Sbjct: 427 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVV 486

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T+  +++ ++  G + K  E+   M + G++ ++  +S++  G+V+  +   A ++   M
Sbjct: 487 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 546

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
            K G+ P+V+++  +I+ +C    M RA+   ++M ++   P  +T+  ++ G+ ++   
Sbjct: 547 VKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDM 606

Query: 397 WRAEELLQVMEEKGVRPKKSTI 418
            R+ E+  +M   G  P   T 
Sbjct: 607 RRSLEVFDMMRRCGCVPTVHTF 628



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/259 (20%), Positives = 117/259 (45%)

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
           W  V        +P    +  + + Y + G+ +RA +    M+   + P  R    ++  
Sbjct: 295 WQAVISAFEKINKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHA 354

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           Y    +ME+A+  + +MKE  +  +LV ++ ++ GF    +++  D      +      +
Sbjct: 355 YAVGRDMEEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLN 414

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
              +  I+ A      M + + +  +M + GI+  I ++  +  GY    + +K   +  
Sbjct: 415 ASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFK 474

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            +++ G  P VV +  +I+ +    K+ +A+ +   M E G+  NLKTY  ++ G+ + K
Sbjct: 475 RLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLK 534

Query: 395 QPWRAEELLQVMEEKGVRP 413
               A  + + M ++G++P
Sbjct: 535 DWANAFAVFEDMVKEGMKP 553



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/268 (20%), Positives = 110/268 (41%), Gaps = 41/268 (15%)

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           +L R     G+ ++A    FE  N   +P+    G++V  Y + G+M  A     RM+  
Sbjct: 283 SLQRILDTNGDNWQAVISAFEKIN---KPSRTEFGLMVKFYGRRGDMHRARETFERMRAR 339

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            + P   ++ SLI  +   +D   +++AL+ + +                          
Sbjct: 340 GITPTSRIYTSLIHAYAVGRD---MEEALSCVRK-------------------------- 370

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
                 M + GIE  +  +S++  G+ +AG  + A+      ++     N  ++  +I  
Sbjct: 371 ------MKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYA 424

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C    M+RA ++  +M E GI+  +  Y T++ GY       +   + + ++E G  P 
Sbjct: 425 HCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPT 484

Query: 415 KSTIQLVADSWRAIG---LAREAKRVLK 439
             T   + + +  +G    A E  RV+K
Sbjct: 485 VVTYGCLINLYTKVGKISKALEVSRVMK 512



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 79/172 (45%)

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           KP    F  ++  +   G M + +E F+ M   GI P   +++ L   Y    + ++A S
Sbjct: 307 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALS 366

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
            +  M++ G+  ++V ++ ++ G+  A   + A   +++   I    N   Y  +++ + 
Sbjct: 367 CVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHC 426

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           +     RAE L++ MEE+G+    +    + D +  +   ++   V K  +E
Sbjct: 427 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKE 478


>gi|357520955|ref|XP_003630766.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355524788|gb|AET05242.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 223

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 107/215 (49%), Positives = 143/215 (66%), Gaps = 17/215 (7%)

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           +SILAKGYVRAG+P KAE++L SM KYG+  NVV+FTT+ISGWC A KM  A+ +YEKM 
Sbjct: 1   YSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKMN 60

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
           E+G   NLKTYETL+WGYGEAKQPW+AEELL  MEE GV P+ STI+LV  +    G   
Sbjct: 61  EMGTPLNLKTYETLIWGYGEAKQPWKAEELLVTMEESGVAPEMSTIELVILN----GSEE 116

Query: 433 EAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNS-TFLQIPGVVSSE-HNGSSAA 490
           E++      +   QS+         + I++KQ L AS S   LQ+P +V ++    S+ A
Sbjct: 117 ESEFDESFDKIPGQSL---------DRIYKKQKLGASQSNNLLQMPDIVVAQPERTSNNA 167

Query: 491 KIRSQIVLRS-DTVWTATKSL-FVNTYGSGVQPMV 523
            I+SQ+++++  TV  AT S+ FV     GVQP++
Sbjct: 168 NIKSQMIVKTYGTVRNATVSMVFVRKNSYGVQPLI 202



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 58/110 (52%)

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           ++ L KG++     D  +  L  M ++G++ +VV F+TI+  W +AG M     +++ M 
Sbjct: 1   YSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKMN 60

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           + G   ++  +  L  GY  A +P KAE +L +M + GV P +     VI
Sbjct: 61  EMGTPLNLKTYETLIWGYGEAKQPWKAEELLVTMEESGVAPEMSTIELVI 110



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 58/110 (52%)

Query: 173 YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMK 232
           Y+ LA+ Y + G+  +AE +L  M    ++ N      I+SG+C  G M+ A+R   +M 
Sbjct: 1   YSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKMN 60

Query: 233 ELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIM 282
           E+    NL  + +LI G+ + K     ++ L  MEE GV P++ T   ++
Sbjct: 61  EMGTPLNLKTYETLIWGYGEAKQPWKAEELLVTMEESGVAPEMSTIELVI 110



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 59/111 (53%), Gaps = 1/111 (0%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           Y+ L     R  +     +L++ + K G++ + ++F  +I+    +G +D A+++++KM 
Sbjct: 1   YSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKMN 60

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           + G      TY TLI GYG   +P ++ +LL  M ++  V P   T  +++
Sbjct: 61  EMGTPLNLKTYETLIWGYGEAKQPWKAEELLVTM-EESGVAPEMSTIELVI 110



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 1/111 (0%)

Query: 102 YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
           Y+ L KGY   G+P+++  LL  M++   ++ N   +  ++  WC+   ++ A  +  KM
Sbjct: 1   YSILAKGYVRAGQPDKAEALLNSMTK-YGLQANVVIFTTIISGWCAAGKMDCALRLYEKM 59

Query: 162 VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
              G   +  TY TL   Y +  + ++AE++L  M+ + V P   T  +++
Sbjct: 60  NEMGTPLNLKTYETLIWGYGEAKQPWKAEELLVTMEESGVAPEMSTIELVI 110


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 194/397 (48%), Gaps = 1/397 (0%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           T++ L+  L +        SL  +   +G   D   +  +++  +++  + EA+ + +K+
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
             +GC PT +TYN L+ G   +G+ EE++ LL+ +  D    P+  TY  L+     K  
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV-DNGCTPDVVTYTSLIDGLGKKKR 119

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
             EA+ +  +M + G+  D V Y  L R   Q G+  +A  +   M +    P+  T   
Sbjct: 120 SFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 179

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++ G CK G +  A+R    M+   + PN VV+++LI G    +  D   + L  M++  
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 239

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
             PD +T++ ++D    +G +   +  FD+M++AG +PD++ ++IL  G+ +AG    A 
Sbjct: 240 CTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAC 299

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +   M      PNVV + T+ISG C   ++ +A   Y+ M E G  P+   Y +L+ G 
Sbjct: 300 GVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGL 359

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
            ++ +      L   ME  GV   ++  +L+    +A
Sbjct: 360 CKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKA 396



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 196/411 (47%), Gaps = 2/411 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N LV  G   +AH +       G    + TYTT+V  L + K+ +  ++L+ K+  +G 
Sbjct: 6   INGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGC 65

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P    +NA++N   + G ++EA+ + +K+ D+GC P   TY +LI G G   +  E+ K
Sbjct: 66  TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYK 125

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M+  + +  +   Y  L+R       I +A +V   M + G  PD VT +T+    
Sbjct: 126 LFKEMAS-RGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGL 184

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A ++   M+   + PNE     ++ G CK   M+ A+  L +MK+    P+ 
Sbjct: 185 CKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 244

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +N LI G     D          M E G KPDV T++ ++  +  AG       +FDD
Sbjct: 245 ITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDD 304

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M  +   P++  +  L  G  +  +  KA      M++ G  P+  ++++++ G C + K
Sbjct: 305 MSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGK 364

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           ++    ++++M   G+  N +T   L++   +A +   A  L   + ++G+
Sbjct: 365 LEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM 414



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 135/314 (42%), Gaps = 1/314 (0%)

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           T++IL+        + +A ++  +   +G   D  TY T+    A+  +   A  ++ ++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
             N   P   T   +++G CK G +E+A+  L ++ +    P++V + SLI G    K S
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
               K    M   G+  D V ++ ++     AG + +   ++  M   G  PD+   S +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G  +AG    A  I  SM   G+ PN V+++ +I G C A KM  A+ +  +M +   
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            P+  TY  L+ G  ++     A      M E G +P   T  ++   +   G    A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 437 VLKSAEEDRQSMPN 450
           V       R S PN
Sbjct: 301 VFDDMSSSRCS-PN 313



 Score = 38.9 bits (89), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           T T L+  L +  R    +SL + + K+GM P    +N++I+A  +SG V+E   ++Q+M
Sbjct: 385 TRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM 443


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 200/416 (48%), Gaps = 11/416 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  EA  +   + E+G  PT+ TYT  +++L    R    ++L+  + K G 
Sbjct: 274 INGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGC 333

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P    + A+I+    +G ++ A+ ++ KM   G  P T TYN LI      G+   +LK
Sbjct: 334 SPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALK 393

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M +      N +TYN +++     + IE+A  V  KM+  G  P  VTYNTL    
Sbjct: 394 IFDWM-EGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVEN 452

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A + L+ M+ +   P+ERT   ++SG+CK G ++ A  F Y M +  + PN 
Sbjct: 453 LKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQ 512

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             + ++I G+        +D AL+L   MEE G    + T++ I+   S      + ++ 
Sbjct: 513 WTYTAMIDGYC---KEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKF 569

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
              M + G++P+   ++ L  G  +      A  I   M K    PN   +T++I G C 
Sbjct: 570 CAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQ 629

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             K+  A    E++ E G  P + TY TL+ G     +   A +L++ M+EKG+ P
Sbjct: 630 EGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSP 681



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 198/405 (48%), Gaps = 1/405 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  ++  +   G +P+L+T+ T++  L ++ + +  + + +K+ +  + PD+  + ++I 
Sbjct: 181 AQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLIL 240

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
               +  +D+A ++F +M   GC P + TY+TLI G  N G+  E++ +L+ M++ K ++
Sbjct: 241 GHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTE-KGIE 299

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P   TY + + + C    +++A N+V  M   G  P   TY  +     + G+   A  M
Sbjct: 300 PTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGM 359

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             +M    + PN  T   +++  C EG    A++    M+      N   +N +IKG   
Sbjct: 360 YHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFG 419

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           + D +        M + G  P VVT++T++      G +         M ++  EPD   
Sbjct: 420 MDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERT 479

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           +  L  G+ + G+   A S    M K G+ PN   +T +I G+C   K+  A+S++E+M 
Sbjct: 480 YCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERME 539

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           E G + +++TY  ++ G  +  +   AE+    M E+G++P   T
Sbjct: 540 ENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTIT 584



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 196/417 (47%), Gaps = 1/417 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +NIL  KGK  EA  +FN + +    P   TYT+L+    R ++      +  ++ KDG 
Sbjct: 204 INILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGC 263

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+S+ ++ +IN     G + EAM + ++M + G +PT  TY   I    ++G+ ++++ 
Sbjct: 264 NPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAIN 323

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L++ M + K   P+ +TY  ++        +E A  + +KM+  G+ P+ VTYN L    
Sbjct: 324 LVRSMGK-KGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINEL 382

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A ++   M+ +    N +T   I+ G     ++E AM    +M +    P +
Sbjct: 383 CTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTV 442

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+LI   L     +   + L +M+E   +PD  T+  ++  +   G +      F +
Sbjct: 443 VTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYE 502

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+K GI P+   ++ +  GY + G+   A S+   M + G   ++  +  +ISG     +
Sbjct: 503 MLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNR 562

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              A     KM E G+ PN  TY +L+ G  +      A ++   ME+K   P   T
Sbjct: 563 FSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHT 619



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 89/383 (23%), Positives = 171/383 (44%), Gaps = 5/383 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G     +A  +FN ++++G  PT++TY TL+    ++    +    +  +++   +PD
Sbjct: 417 LFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPD 476

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +  +I+   + G +D A   F +M   G  P   TY  +I GY   GK + +L L +
Sbjct: 477 ERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFE 536

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M ++     +  TYN ++      N   EA     KM   G+QP+ +TY +L     + 
Sbjct: 537 RM-EENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKN 595

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
             T  A ++  EM+     PN  T   ++ G C+EG ++ A     R+ E    P +  +
Sbjct: 596 TATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTY 651

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           ++L+ G      S+   + +  M+E G+ P +  + +++ A   +  +    EIF+ M  
Sbjct: 652 STLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAV 711

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G +P + ++ +L          ++A +I  S+ K   + +++++T ++ G         
Sbjct: 712 KGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDL 771

Query: 364 AMSIYEKMCEIGINPNLKTYETL 386
            M     M      P+L TY  L
Sbjct: 772 CMKFLYLMESRNCTPSLHTYIIL 794



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 165/379 (43%), Gaps = 36/379 (9%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           FN ++    +   V  A  ++ ++  SG KP+  T+NT+I      GK +E++ +   + 
Sbjct: 165 FNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIF 224

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           Q  ++ P+  TY  L+   C    +++A+ V  +MV  G  P++VTY+TL       G  
Sbjct: 225 Q-FDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRI 283

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A  ML EM    + P   T  + +S  C  G ++DA+  +  M +    P++  + ++
Sbjct: 284 GEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAI 343

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G       +        M + G+ P+ VT++ +++   + G  G   +IFD M   G 
Sbjct: 344 ISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGT 403

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT---------------- 350
             +   ++ + KG     + +KA  +   M K G  P VV + T                
Sbjct: 404 LANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATR 463

Query: 351 -------------------VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
                              +ISG+C   K+  A S + +M + GI+PN  TY  ++ GY 
Sbjct: 464 FLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYC 523

Query: 392 EAKQPWRAEELLQVMEEKG 410
           +  +   A  L + MEE G
Sbjct: 524 KEGKIDVALSLFERMEENG 542



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 142/272 (52%), Gaps = 3/272 (1%)

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT---YNT 175
           + +L  + +DK + P D    ++++A  +++ ++   + ++ + +S       T   +NT
Sbjct: 108 VSMLNRLVKDKILAPADHVRILMIKACRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNT 167

Query: 176 LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
           L     ++     A+ +  ++ ++ V+P+  T   +++  CK+G +++A+    ++ + +
Sbjct: 168 LLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFD 227

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           + P+   + SLI G    +  D   +    M + G  P+ VT+ST+++   + G +G+  
Sbjct: 228 LCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAM 287

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           ++ ++M + GIEP ++ +++        G    A +++ SM K G  P+V  +T +ISG 
Sbjct: 288 DMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGL 347

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
             A KM+ A+ +Y KM + G+ PN  TY  L+
Sbjct: 348 FRAGKMELAIGMYHKMLKEGLVPNTVTYNALI 379



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 129/283 (45%), Gaps = 5/283 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK   A  +F  + E G   ++ TY  +++ L++  RF       +K+ + G++P++I 
Sbjct: 525 EGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTIT 584

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           + ++IN   ++   + A KIF +M+   C P   TY +LI G    GK + + +L     
Sbjct: 585 YTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERL----- 639

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +   +P   TY+ LV   C +    EA  +V  M   G+ P    Y +L  A+ +  + 
Sbjct: 640 TENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKV 699

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++   M     +P+     +++   C     E+A+     + + + + +L+V+  L
Sbjct: 700 DCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVL 759

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
           + G L   DSD   K L LME     P + T+  +    S  G
Sbjct: 760 VDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVG 802



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 112/242 (46%), Gaps = 5/242 (2%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           + E+G +P  ITYT+L+  L +         +  ++EK    P++  + ++I    + G 
Sbjct: 573 MTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGK 632

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           VD A    +++ ++GC+PT  TY+TL+ G    G+  E+ +L++ M ++K + P+   Y 
Sbjct: 633 VDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENM-KEKGLSPSMEIYC 687

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+ A C    ++ A  +   M   G QP    Y  L  A         A  +   +   
Sbjct: 688 SLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKK 747

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           Q   +     ++V G  +EG+ +  M+FLY M+     P+L  +  L +    +  S G 
Sbjct: 748 QWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGT 807

Query: 260 DK 261
           D+
Sbjct: 808 DQ 809



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 85/166 (51%)

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           + +F+T++       ++   Q ++  +  +G++P +  F+ +     + G+ Q+A  +  
Sbjct: 162 LYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFN 221

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            + ++ + P+   +T++I G C   K+ +A  ++++M + G NPN  TY TL+ G     
Sbjct: 222 KIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEG 281

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
           +   A ++L+ M EKG+ P   T  +   S   IG   +A  +++S
Sbjct: 282 RIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRS 327



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 1/173 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L E G  PT+ TY+TLV+ L R+ R      L+  +++ G+ P   ++ +++ A  +S  
Sbjct: 639 LTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLK 698

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           VD A++IF  M   G +P    Y  LI     V + EE+L + Q + + K    +   + 
Sbjct: 699 VDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLK-KQWNSDLIVWT 757

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           +LV     +   +     +Y M +    P   TY  LAR  ++ G++   +Q+
Sbjct: 758 VLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQI 810



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 46/99 (46%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           IFN +  +G +P L  Y  L+ AL    R +  L++   + K     D I++  +++   
Sbjct: 705 IFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLL 764

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK 114
           + G+ D  MK    M+   C P+  TY  L +    VGK
Sbjct: 765 QEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGK 803


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 189/408 (46%), Gaps = 8/408 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT  TY  L+ AL R+   +     +S + + G +PD+  FN++I     +  +D A  +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F KM   G      +Y  LI+G+   G+ +E+L+L + + Q     P+  T+  LV+  C
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ-----PDMYTHAALVKGLC 241

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                EE   ++ KM   G +P    Y  L   + +  +   AE+ML EM +N + P   
Sbjct: 242 DARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAV 301

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           TC  +V+ YC+EG M  A+R    MK     PN+  +N++++GF ++         L  M
Sbjct: 302 TCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQM 361

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            E GV+PDVVT++ ++      G +     +   M   G+  D + +++L     + G+ 
Sbjct: 362 RECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKV 421

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +A S+   +   G+ PN V F TVI+G C   K   A +  EKM   G  P+  TY   
Sbjct: 422 DEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPF 481

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW---RAIGLA 431
           +    + K        +  M +K V+P      +V D     R  GLA
Sbjct: 482 IENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLA 529



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 187/375 (49%), Gaps = 7/375 (1%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           E  Y+   + E G RP    Y  LV    R+++ +    +++++  +G+ P ++   A++
Sbjct: 248 EGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVV 307

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           NA    G +  A+++F+ MK  GC+P   TYN +++G+ NVGK  +++ LL  M ++  V
Sbjct: 308 NAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQM-RECGV 366

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +P+  TYN+L+R  C    IE A+ ++  M  +G+  D  TYN L  A  + G+   A  
Sbjct: 367 EPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACS 426

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +   ++   +RPN  T   +++G CK G  + A  FL +M      P+   ++  I+   
Sbjct: 427 LFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLC 486

Query: 252 DIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
             K   G  + L+ ++E     VKP  V ++ ++D        G    I+  MV  G  P
Sbjct: 487 KTK---GSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSP 543

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D+  ++   + Y   G   +AE+++  M+K G+  + + + T+I G  +  K   A++I 
Sbjct: 544 DVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTIL 603

Query: 369 EKMCEIGINPNLKTY 383
           + M  +   PN  T+
Sbjct: 604 KHMTGVASMPNHFTF 618



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 215/475 (45%), Gaps = 42/475 (8%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           H   Y+ + ++  G RP   T+ +L+    R ++      L  K+   G   D++ + A+
Sbjct: 147 HAQRYL-SLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAAL 205

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           I    E+G VDEA+++F++++    +P   T+  L+KG  +  + EE L +LQ M ++  
Sbjct: 206 IEGFCETGRVDEALELFRELE----QPDMYTHAALVKGLCDARRGEEGLYMLQKM-KELG 260

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
            +P  R Y  LV  WC +   EEA  ++ +M  +G+ P AVT   +  AY + G    A 
Sbjct: 261 WRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAV 320

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG- 249
           ++   M+     PN  T   +V G+C  G +  AM  L +M+E  V P++V +N LI+G 
Sbjct: 321 RVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQ 380

Query: 250 -----------FLDIKDSDG--------------------VDKALTL---MEEFGVKPDV 275
                       L + + +G                    VD+A +L   +E  G++P+ 
Sbjct: 381 CIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNS 440

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           VTF+T+++     G         + MV AG  PD + +S   +   +    ++  S +  
Sbjct: 441 VTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDE 500

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M +  V P+ V +T VI           A  I+ +M  +G +P++ TY T +  Y    +
Sbjct: 501 MLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGR 560

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
              AE ++  M++ G+         + D   +IG    A  +LK       SMPN
Sbjct: 561 LHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHM-TGVASMPN 614



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 187/417 (44%), Gaps = 19/417 (4%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  + N + + G  P  +T T +V A  R+ R    + +   ++  G +P+   +N
Sbjct: 280 KAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYN 339

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           AM+      G V +AM +  +M++ G +P   TYN LI+G    G  E + +LL+LM + 
Sbjct: 340 AMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLM-EG 398

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
             +  +  TYN+L+ A C    ++EA ++   +   GI+P++VT+NT+     + G+   
Sbjct: 399 NGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDV 458

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A   L +M +    P+  T    +   CK     + + F+  M + +V P+ V +  +I 
Sbjct: 459 ACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVID 518

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
                ++     +    M   G  PDVVT++T + A+ + G + + + +  +M K GI  
Sbjct: 519 RLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIV 578

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF-----------------TTV 351
           D   ++ L  G+   G+   A +IL  M      PN   F                    
Sbjct: 579 DAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKT 638

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
            S W   +++     ++E M +  +  + + Y  +L G+ E ++      L+  M+E
Sbjct: 639 TSVW-KTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKE 694



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 158/342 (46%), Gaps = 4/342 (1%)

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
           T+ +L+  +         L+L   M       P   TYN L+RA C +  +  A   +  
Sbjct: 95  TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSL 154

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           MV SG +PDA T+N+L   Y +  +   A+ +  +M       +  +   ++ G+C+ G 
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           +++A+      +ELE  P++    +L+KG  D +  +     L  M+E G +P    ++ 
Sbjct: 215 VDEALELF---RELE-QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAA 270

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++D W       + +++ ++M   G+ P     + +   Y R G    A  +  SM+  G
Sbjct: 271 LVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG 330

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
             PNV  +  ++ G+CN  K+ +AM++ ++M E G+ P++ TY  L+ G         A 
Sbjct: 331 CEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAF 390

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
            LL++ME  G+   + T  ++ D+    G   EA  +    E
Sbjct: 391 RLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLE 432



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/409 (22%), Positives = 177/409 (43%), Gaps = 17/409 (4%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           TY  L+ AL +  +     SL   +E  G++P+S+ FN +IN   + G  D A    +KM
Sbjct: 407 TYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKM 466

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
             +GC P T TY+  I+         E L  +  M Q K+VKP+   Y I++     + +
Sbjct: 467 VSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQ-KDVKPSTVNYTIVIDRLFKERN 525

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
              A  +  +MV+ G  PD VTY T  RAY   G  + AE ++ EM+   +  +      
Sbjct: 526 YGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNT 585

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT------ 264
           ++ G+   G  + A+  L  M  +   PN   F  L++  L  + ++ V    T      
Sbjct: 586 LIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTI 645

Query: 265 ----------LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
                     LM++  V      +  I++ +S    + +   +   M +  +  +  +++
Sbjct: 646 ELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYT 705

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            L   + +      A ++L SM  +G  PN++ +  ++SG+    +  RA  I+  +   
Sbjct: 706 SLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWK 765

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
             N +   ++ ++ G      P    +++ ++E+   +P   T  ++ +
Sbjct: 766 EYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTE 814



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/291 (19%), Positives = 125/291 (42%), Gaps = 17/291 (5%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  I+  ++  G  P ++TYTT V A   + R     +++ +++K G+  D++ +N +I+
Sbjct: 529 ATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLID 588

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES-------------- 118
             +  G  D A+ I + M      P   T+  L++        E+               
Sbjct: 589 GHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELA 648

Query: 119 --LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
              +L +LM ++ +V  + R Y  ++  +  +  ++E  ++V  M    +  +   Y +L
Sbjct: 649 DVFELFELMKKN-SVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSL 707

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
              + +      A  +L  M  +   PN  +   ++SG+  EG  + A      ++  E 
Sbjct: 708 VNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEY 767

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
           + + +V+  +I G +     D     ++++E+   KP   T++ + +  S+
Sbjct: 768 NTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEELST 818


>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Cucumis sativus]
          Length = 962

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 111/452 (24%), Positives = 217/452 (48%), Gaps = 36/452 (7%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A + F    E+      I Y  ++ A  ++       +L+ ++E++G+     ++
Sbjct: 395 GNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIY 454

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + M++  +  G+ D+ + +F++ K+ G  P+  TY  LI  Y  +GK  ++L++ + M +
Sbjct: 455 HTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEM-E 513

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              +K N +TY++L+  +        A+ +   ++  GI+PD V YN +  A+   G+  
Sbjct: 514 HAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMD 573

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           RA   + EMQ  + +P  RT   I+ G+ ++G M+ A+     M+     P +  +N+LI
Sbjct: 574 RAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALI 633

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G ++ +  +  ++ L  M   GV P+  T++TIM  ++S G  GK    F  +   G++
Sbjct: 634 LGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQ 693

Query: 308 PDIH-----------------------------------VFSILAKGYVRAGEPQKAESI 332
            D++                                   +++IL  G+ R G+  +A  +
Sbjct: 694 LDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADL 753

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           +  M++ GV P++  +T+ I+    A  MQRA    E+M  +G+ PN+KTY TL+ G+  
Sbjct: 754 MQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWAR 813

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           A  P +A    + M+  G++P ++    +  S
Sbjct: 814 ASLPEKALSCFEEMKLSGLKPDRAVYHCLMTS 845



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 185/390 (47%), Gaps = 7/390 (1%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P+   Y  +V   TR+           K+   G++P S ++  +I+A +   +++EA+ 
Sbjct: 308 KPSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALS 367

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
             +KMK+ G + +  TY+ L+ G+   G  E +    Q  +++K+   N   Y  ++ A+
Sbjct: 368 CVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQ-EAKEKHSSLNAIIYGNIIYAY 426

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C + ++++A  +V +M   GI      Y+T+   Y   G+  +   +    +   + P+ 
Sbjct: 427 CQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSV 486

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T G +++ Y K G +  A+     M+   +  N+  ++ LI GFL +KD      A  +
Sbjct: 487 ITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKD---WANAFAI 543

Query: 266 MEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
            E+    G+KPDVV ++ I+ A+   G M +      +M K   +P    F  +  G+ R
Sbjct: 544 FEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFAR 603

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            GE +KA  +   MR  G  P V  +  +I G     KM++A  I ++M   G++PN  T
Sbjct: 604 KGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHT 663

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
           Y T++ GY       +A      + ++G++
Sbjct: 664 YTTIMHGYASLGDTGKAFTYFTKLRDEGLQ 693



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/478 (22%), Positives = 213/478 (44%), Gaps = 39/478 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G  H A   F  +   G  P+   YT L+ A    +  +  LS + K++++G+
Sbjct: 318 VNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGI 377

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +   + ++ +++  +++GN + A   FQ+ K+         Y  +I  Y      +++  
Sbjct: 378 EMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEA 437

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L++ M ++    P D  Y+ ++  +      ++   V  +    G+ P  +TY  L   Y
Sbjct: 438 LVREMEEEGIDAPID-IYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLY 496

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+ G+  +A ++  EM++  ++ N +T  ++++G+ K  +  +A      + +  + P++
Sbjct: 497 AKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDV 556

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V++N++I  F  +   D     +  M++   KP   TF  I+  ++  G M K  ++FD 
Sbjct: 557 VLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDM 616

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW----- 355
           M  +G  P +H ++ L  G V   + +KAE IL  M   GV PN   +TT++ G+     
Sbjct: 617 MRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGD 676

Query: 356 ------------------------------CNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
                                         C + +MQ A+++ ++M    I  N   Y  
Sbjct: 677 TGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNI 736

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           L+ G+      W A +L+Q M+ +GV+P    I        A   A + +R  K+ EE
Sbjct: 737 LIDGWARRGDIWEAADLMQQMKREGVQPD---IHTYTSFINACSKAGDMQRATKTIEE 791



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 179/372 (48%), Gaps = 18/372 (4%)

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
           +E  N    +  F+++K    KP+   Y  ++  Y   G    + +  + M + + ++P+
Sbjct: 291 TEPENWQAVVSAFERIK----KPSRKEYGLMVNYYTRRGDMHRARETFEKM-RARGIEPS 345

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
              Y  L+ A+     +EEA + V KM   GI+   VTY+ L   +A+ G    A+    
Sbjct: 346 SHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQ 405

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           E +      N    G I+  YC+  NM+ A   +  M+E  +   + ++++++ G+  + 
Sbjct: 406 EAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVG 465

Query: 255 DSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
           D D   K L + E F   G+ P V+T+  +++ ++  G + K  E+  +M  AGI+ ++ 
Sbjct: 466 DED---KCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMK 522

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            +S+L  G+++  +   A +I   + K G+ P+VV++  +I+ +C   KM RA+   ++M
Sbjct: 523 TYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEM 582

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
            +    P  +T+  ++ G+    +  +A ++  +M   G  P   T       + A+ L 
Sbjct: 583 QKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHT-------YNALILG 635

Query: 432 REAKRVLKSAEE 443
              KR ++ AE+
Sbjct: 636 LVEKRKMEKAEQ 647



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 126/245 (51%), Gaps = 1/245 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG+  +A  +F+ +   G  PT+ TY  L+  L  +++ +    ++ ++   G+ P+   
Sbjct: 604 KGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHT 663

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +  +++  +  G+  +A   F K++D G +    TY  L+K     G+ + +L + + MS
Sbjct: 664 YTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMS 723

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             +N+  N   YNIL+  W  +  I EA +++ +M   G+QPD  TY +   A ++ G+ 
Sbjct: 724 A-QNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDM 782

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            RA + + EM++  V+PN +T   +++G+ +    E A+     MK   + P+  V++ L
Sbjct: 783 QRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCL 842

Query: 247 IKGFL 251
           +   L
Sbjct: 843 MTSLL 847



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/334 (19%), Positives = 148/334 (44%), Gaps = 2/334 (0%)

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           E W  V        +P    Y  +   Y + G+ +RA +   +M+   + P+      ++
Sbjct: 294 ENWQAVVSAFERIKKPSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLI 353

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
             Y    +ME+A+  + +MKE  +  +LV ++ L+ GF    +++  D      +E    
Sbjct: 354 HAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSS 413

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            + + +  I+ A+     M K + +  +M + GI+  I ++  +  GY   G+  K   +
Sbjct: 414 LNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLV 473

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
               ++ G++P+V+ +  +I+ +    K+ +A+ + ++M   GI  N+KTY  L+ G+ +
Sbjct: 474 FERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLK 533

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK 452
            K    A  + + + + G++P       +  ++  +G    A   +K  ++ R     + 
Sbjct: 534 LKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRT 593

Query: 453 DEIAVESIHRKQNLSASNSTF--LQIPGVVSSEH 484
               +    RK  +  +   F  +++ G + + H
Sbjct: 594 FMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVH 627


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 215/451 (47%), Gaps = 12/451 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P ++T+ TL+  L R   F+ +  +++++ + G  PD  ++  +I+   + G+++ A +I
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M   G KP    YNT++KG  +  + +E+ +LL  M Q K+   +D T+NILV  +C
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ-KDCPLDDVTFNILVDFFC 367

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               ++    ++ +M++ G  PD +TY T+   + + G    A  +L  M +   +PN  
Sbjct: 368 QNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTV 427

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           +  I++ G C  G   DA   + +M +    PN V FN+LI  FL  K    V++A+ L+
Sbjct: 428 SYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN-FLCKKGL--VEQAIELL 484

Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           ++    G  PD++++ST++D    AG   +  E+ + MV  GI P+  ++S +A    R 
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G   K   +  +++   +  + V++  VIS  C   +  RA+  +  M   G  PN  TY
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             L+ G         A+ELL  +  +G   K         +       ++ +  L SA +
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGISNCTQENGKQKCEENLTSAVD 664

Query: 444 DRQSMPNKKDEIAVESIHRKQNLSASNSTFL 474
           +   +P     I +      QNL      FL
Sbjct: 665 NNYKLP-----IEILGFLEIQNLRPGEKQFL 690



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 205/432 (47%), Gaps = 6/432 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  +A  + + +  +G  P    Y  ++ A  R   F++ + ++  +   G   D
Sbjct: 121 LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLD 180

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +   N ++NA  E G VDEA+ + +K+   GC+    +YN ++KG     +  +  +L+ 
Sbjct: 181 TGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMD 240

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +  +  PN  T+N L+   C     E    V+ +M   G  PD   Y T+     + 
Sbjct: 241 EMVR-VDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKE 299

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A ++L  M +  ++PN      ++ G C     ++A   L  M + +   + V F
Sbjct: 300 GHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTF 359

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N L+  F      D V + L  M   G  PDV+T++T+++ +   GL+ +   +   M  
Sbjct: 360 NILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G +P+   ++I+ KG   AG    AE +++ M + G  PN V F T+I+  C    +++
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+ + ++M   G +P+L +Y T++ G G+A +   A ELL VM  KG+ P       +  
Sbjct: 480 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNT-----IIY 534

Query: 424 SWRAIGLAREAK 435
           S  A  L+RE +
Sbjct: 535 SSIACALSREGR 546



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/438 (23%), Positives = 208/438 (47%), Gaps = 1/438 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  +G   EA  +   L   G    +++Y  ++  L   KR+  +  L+ ++ +   
Sbjct: 188 LNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDC 247

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + FN +I     +G  +   ++  +M + GC P    Y T+I G    G  E + +
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANE 307

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M     +KPN   YN +++  CS    +EA  ++ +M       D VT+N L   +
Sbjct: 308 ILNRMPS-YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G   R  ++L +M ++   P+  T   +++G+CKEG +++A+  L  M      PN 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +  ++KG          ++ ++ M + G  P+ VTF+T+++     GL+ +  E+   
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  G  PD+  +S +  G  +AG+ ++A  +L  M   G+ PN ++++++        +
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGR 546

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           + + + +++ + +  I  +   Y  ++    +  +  RA +    M   G  P +ST  +
Sbjct: 547 VNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTM 606

Query: 421 VADSWRAIGLAREAKRVL 438
           +     + GLA+EA+ +L
Sbjct: 607 LIKGLASEGLAKEAQELL 624



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 96/411 (23%), Positives = 188/411 (45%), Gaps = 4/411 (0%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
           ++ Y  +VA   R  +  +   L + V    + P++  F  ++      G + +A+++  
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
           +M   GC P    Y+ +++     G    S+++L+ M   K    +    N+++ A C +
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM-HAKGCTLDTGNCNLVLNAICEQ 194

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
             ++EA  ++ K+   G + D V+YN + +           E+++ EM      PN  T 
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             ++   C+ G  E     L +M E    P++ ++ ++I G       +  ++ L  M  
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
           +G+KP+VV ++T++    SA    + +E+  +M +     D   F+IL   + + G   +
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
              +L  M  +G  P+V+ +TTVI+G+C    +  A+ + + M   G  PN  +Y  +L 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           G   A +   AEEL+  M ++G  P   T   + +     GL  +A  +LK
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/207 (19%), Positives = 81/207 (39%)

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           V P+  TF  ++    + G +    E+ D+M   G  P   ++ ++ +   R+G  + + 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +L +M   G   +      V++  C    +  A+ +  K+   G   ++ +Y  +L G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
             AK+    EEL+  M      P   T   +       GL      VL    E   +   
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 451 KKDEIAVESIHRKQNLSASNSTFLQIP 477
           +     ++ I ++ +L  +N    ++P
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMP 313


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 185/364 (50%), Gaps = 9/364 (2%)

Query: 62  PDSILFNAMINA-CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           PD I +  +I A C+ESG V +AMK+  +M   GCKP   TYN L+ G    G+ +E++K
Sbjct: 14  PDVITYTILIEATCAESG-VGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIK 72

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L  M    + +PN  T+NI++R+ CS     +A  ++ +MV  G  P  VT+N L    
Sbjct: 73  FLNSMPSYGS-QPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFL 131

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G   RA  +L +M  +   PN  +   ++ G+CKE  M+ A+++L  M     +P++
Sbjct: 132 CRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDI 191

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +N+++      KD   VD A+ L+ +    G  P ++T++T++D  S  G   +  E+
Sbjct: 192 VTYNTMLTAL--CKDGK-VDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVEL 248

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
             +M   G++PD+  +S L  G  R G+ ++A      +  +GV PN   + +++ G C 
Sbjct: 249 LHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCK 308

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           A +  RA+     M   G  P   +Y  L+ G         A ELL  +  +GV  K S 
Sbjct: 309 AQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSA 368

Query: 418 IQLV 421
            Q+V
Sbjct: 369 EQVV 372



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 180/355 (50%), Gaps = 1/355 (0%)

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           M++  +  +  C P   TY  LI+         +++KLL  M   +  KP+  TYN+LV 
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGS-RGCKPDVVTYNVLVN 59

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C +  ++EA   +  M + G QP+ +T+N + R+    G    AE++L EM      P
Sbjct: 60  GMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSP 119

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T  I+++  C++G +  A+  L +M      PN + +N L+ GF   K  D   + L
Sbjct: 120 SVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYL 179

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            +M   G  PD+VT++T++ A    G +    E+ + +   G  P +  ++ +  G  + 
Sbjct: 180 EIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKV 239

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+  +A  +L  MR  G+ P+V+ ++++I+G     K++ A+  +  +   G+ PN  TY
Sbjct: 240 GKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTY 299

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            ++++G  +A+Q  RA + L  M  KG +P + +  ++ +     GLA+EA  +L
Sbjct: 300 NSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELL 354



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 179/356 (50%), Gaps = 1/356 (0%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
           +E+   P +ITYT L+ A   +      + L+ ++   G KPD + +N ++N   + G +
Sbjct: 8   LEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRL 67

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           DEA+K    M   G +P   T+N +++   + G+  ++ KLL  M + K   P+  T+NI
Sbjct: 68  DEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVR-KGCSPSVVTFNI 126

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+   C K  +  A +++ KM   G  P++++YN L   + +  +  RA Q L  M +  
Sbjct: 127 LINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRG 186

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
             P+  T   +++  CK+G ++ A+  L ++      P L+ +N++I G   +  +D   
Sbjct: 187 CYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAV 246

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           + L  M   G+KPDV+T+S+++   S  G + +  + F D+   G++P+   ++ +  G 
Sbjct: 247 ELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGL 306

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
            +A +  +A   L  M   G  P  V +T +I G  N    + A+ +  ++C  G+
Sbjct: 307 CKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGV 362



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 162/306 (52%), Gaps = 1/306 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  +G+  EA    N +   G +P +IT+  ++ ++    R+     L++++ + G 
Sbjct: 58  VNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGC 117

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + FN +IN     G +  A+ I +KM   GC P + +YN L+ G+    K + +++
Sbjct: 118 SPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQ 177

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L++M   +   P+  TYN ++ A C    ++ A  ++ ++ + G  P  +TYNT+    
Sbjct: 178 YLEIMVS-RGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGL 236

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++ G+T +A ++L EM+   ++P+  T   +++G  +EG +E+A++F + ++   V PN 
Sbjct: 237 SKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNA 296

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +NS++ G    + +D     L  M   G KP  V+++ +++  ++ GL  +  E+ ++
Sbjct: 297 FTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNE 356

Query: 301 MVKAGI 306
           +   G+
Sbjct: 357 LCSRGV 362



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 62/144 (43%)

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           E+ D  ++    PD+  ++IL +         +A  +L  M   G  P+VV +  +++G 
Sbjct: 2   EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C   ++  A+     M   G  PN+ T+  +L       +   AE+LL  M  KG  P  
Sbjct: 62  CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121

Query: 416 STIQLVADSWRAIGLAREAKRVLK 439
            T  ++ +     GL   A  +L+
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILE 145


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 214/419 (51%), Gaps = 2/419 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  +A  +F+ ++++G  P ++TYT+++ AL + +       ++ ++  +G +P+
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N MI+  S SG   E   +F++M   G  P   T N+ +      GK +E+ +   
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M+  K  KPN  TY++L+  + ++    +  N+   M  +GI  D   +N +  AY + 
Sbjct: 357 SMAA-KGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKR 415

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G       +  +MQ   V P+  T GI+++ + + G + DAM    +M  + + P  +V+
Sbjct: 416 GMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVY 475

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGV-KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +SLI+GF    +     + ++ M   G+ +P++V F++I+++    G + +  +IFD ++
Sbjct: 476 HSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVI 535

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G  PD+  F+ L  GY   G+ +KA  +L +M   G+ P+VV + T+I G+C   ++ 
Sbjct: 536 HIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRID 595

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             + ++ +M   G+ P   TY  +L G     +   A+++   M E G     ST  ++
Sbjct: 596 DGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGII 654



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/426 (24%), Positives = 206/426 (48%), Gaps = 10/426 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   GK  EA   F+ +  +GH+P L+TY+ L+     +  F  +L+L + +E +G+
Sbjct: 339 MSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGI 398

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL- 119
             D  +FN +I+A  + G +DE M IF +M++ G  P   TY  +I  +  +G+  +++ 
Sbjct: 399 VADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMD 458

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGI-QPDAVTYNTLAR 178
           K  Q+++    +KP    Y+ L++ +C   ++ +A  +V +M++ GI +P+ V +N++  
Sbjct: 459 KFNQMIAM--GLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIIN 516

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           +  + G    A  +   + +   RP+  T   ++ GY   G +E A   L  M    + P
Sbjct: 517 SLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEP 576

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           ++V +N+LI G+     +  +D  L L  E    GVKP  +T+  I+    + G     +
Sbjct: 577 DVVSYNTLIDGYC---RNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAK 633

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           ++  +M+++G   DI    I+  G  R     +A ++   +    V  N+ +  T+I   
Sbjct: 634 KMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAM 693

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
               K + A  +++ +   G+ PN  TY  ++    +      A+ +  +ME+ G  P  
Sbjct: 694 YKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSS 753

Query: 416 STIQLV 421
             +  +
Sbjct: 754 RLLNYI 759



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 200/437 (45%), Gaps = 8/437 (1%)

Query: 10  PHEAHYIFNCLIEEGHRP-----TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           P  A  +FN +  E  RP     T+ TY  L+    R +R     +L  +  K G+K D 
Sbjct: 95  PSLAVALFNRICREEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDV 154

Query: 65  ILFNAMINACSESGNVDEAMKIF-QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           I+ + ++     +   D+ + +   +M + G +P T +YNT++K      + + +L LL 
Sbjct: 155 IVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLH 214

Query: 124 LM-SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
            M  +     PN  TYN ++     +  + +A N+ ++M+  G+ PD VTY ++  A  +
Sbjct: 215 TMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCK 274

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                +AE +L +M +N  +PN+ T   ++ GY   G  ++       M    + PN+V 
Sbjct: 275 ARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVT 334

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
            NS +        S    +    M   G KP++VT+S ++  +++ G       +F+ M 
Sbjct: 335 CNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSME 394

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             GI  D  VF+I+   Y + G   +   I T M++ GV P+   +  VI+ +    ++ 
Sbjct: 395 GNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLA 454

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV-RPKKSTIQLV 421
            AM  + +M  +G+ P    Y +L+ G+       +A+EL+  M  +G+ RP       +
Sbjct: 455 DAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSI 514

Query: 422 ADSWRAIGLAREAKRVL 438
            +S    G   EA  + 
Sbjct: 515 INSLCKEGRVVEAHDIF 531



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/437 (21%), Positives = 209/437 (47%), Gaps = 2/437 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  E   +F  +  +G  P ++T  + +++L +  + K        +   G KP+ + +
Sbjct: 311 GQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTY 370

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +++  +  G   + + +F  M+ +G       +N +I  YG  G  +E++ +   M Q
Sbjct: 371 SVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQM-Q 429

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           ++ V P+  TY I++ A+     + +A +   +M+A G++P+ + Y++L + +  +G   
Sbjct: 430 EQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLV 489

Query: 188 RAEQMLFEMQNNQV-RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
           +A++++ EM +  + RPN      I++  CKEG + +A      +  +   P+++ FNSL
Sbjct: 490 KAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSL 549

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G+  +   +     L  M   G++PDVV+++T++D +   G +     +F +M+  G+
Sbjct: 550 IDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGV 609

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           +P    + I+  G    G    A+ +   M + G   ++     ++ G C       A++
Sbjct: 610 KPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIA 669

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           +++K+  + +  N+    T++    + ++   A+EL   +   G+ P  ST  ++  +  
Sbjct: 670 MFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLL 729

Query: 427 AIGLAREAKRVLKSAEE 443
             G   EA  +    E+
Sbjct: 730 KEGSVEEADNMFSLMEK 746



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 121/255 (47%), Gaps = 8/255 (3%)

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFL-DIKDSDGVDKALTLMEEFG-VKPDVVTFSTIMDA 284
            L+RM EL V P+ + +N+++K    D +    +D   T++++ G   P+VVT++T++  
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
               G + K   +F +M++ G+ PD+  ++ +     +A    KAE +L  M   G  PN
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT---YETLLWGYGEAKQPWRAEE 401
            V +  +I G+  + + +    ++ +M   G+ PN+ T   Y + L  +G++K+   A E
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKE---AAE 353

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIH 461
               M  KG +P   T  ++   +   G   +   +  S E +      +   I +++  
Sbjct: 354 FFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYG 413

Query: 462 RKQNLSASNSTFLQI 476
           ++  +  +   F Q+
Sbjct: 414 KRGMMDETMLIFTQM 428



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 36/256 (14%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI-- 65
           GK  +A  + + +I  G  P +++Y TL+    R  R    L L  ++   G+KP +I  
Sbjct: 557 GKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITY 616

Query: 66  ------LFN--------AMINACSESGNV-------------------DEAMKIFQKMKD 92
                 LFN         M +   ESG                     DEA+ +F+K+  
Sbjct: 617 GIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGA 676

Query: 93  SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIE 152
              K   +  NT+I     V K EE+ +L   +S    V PN  TY ++++    + S+E
Sbjct: 677 MNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLV-PNASTYGVMIKNLLKEGSVE 735

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           EA N+   M  SG  P +   N + R   + GE  +A   +F++   ++     T  +++
Sbjct: 736 EADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLM 795

Query: 213 SGYCKEGNMEDAMRFL 228
           + + +EG   + ++ L
Sbjct: 796 ALFSREGKYWEDVKLL 811


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 212/427 (49%), Gaps = 7/427 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MNILV  G  ++AH ++  + ++     + TYT  + +  R  R  + L L+  +   G 
Sbjct: 197 MNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGC 256

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             +++ +  ++    E G+ D A ++F +M +    P  +T+N L+      G   ES +
Sbjct: 257 FSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESER 316

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   + + + V PN  T+NI ++  C + S++ A  ++  +   G++PD VTYNT+    
Sbjct: 317 LFDKVLK-RGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGL 375

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      AE+ L +M N    PN+ T   I+ GYCK+G + DA R L         P+ 
Sbjct: 376 CRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDE 435

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             + SL+ GF   +D D  D+A+ + ++    G++P ++ ++T++      GL+    ++
Sbjct: 436 FTYCSLVNGF--CQDGDP-DQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQL 492

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            ++M + G +PDI  ++++  G  + G    A  ++      G  P++  + T++ G+C 
Sbjct: 493 MNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCR 552

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            +K+  A+ +  +M   G+ P++ TY TLL G  +  +     E+ + M EKG  P   T
Sbjct: 553 QLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIIT 612

Query: 418 IQLVADS 424
              + +S
Sbjct: 613 YNTIIES 619



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 102/421 (24%), Positives = 203/421 (48%), Gaps = 2/421 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G    A  +  C+  EG RP ++TY T++  L R+ R       + K+   G +P+
Sbjct: 340 LCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPN 399

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +N++I+   + G V +A +I +     G KP   TY +L+ G+   G P++++ + +
Sbjct: 400 DFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFK 459

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
                K ++P+   YN L++  C +  I  A  ++ +M   G +PD  TYN +     + 
Sbjct: 460 -DGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKM 518

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A  ++ +       P+  T   +V GYC++  ++ A+  + RM    + P+++ +
Sbjct: 519 GCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITY 578

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+L+ G      S+ V +    M E G  P+++T++TI+++  ++  + +  ++  +M  
Sbjct: 579 NTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKS 638

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK-YGVHPNVVMFTTVISGWCNAVKMQ 362
            G+ PD+  F  L  G+ + G+   A  +   M K Y V      +  +IS +   + M+
Sbjct: 639 KGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMK 698

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A+ ++ +M + G +P+  TY  L+ G+ +     +  + L    EKG  P  +T   V 
Sbjct: 699 MALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVL 758

Query: 423 D 423
           +
Sbjct: 759 N 759



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/422 (24%), Positives = 198/422 (46%), Gaps = 4/422 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK--DGMKPDSILFNAMINACSESGN 79
           ++G + TL TY +++  L    +F  + +L+S++    D    + +   AM       G 
Sbjct: 112 KQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAM-RFYGRKGK 170

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           + EA+  F++M    C P+  +YN ++      G   ++ K+   M +DK V+ +  TY 
Sbjct: 171 IQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRM-KDKKVESDVYTYT 229

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           I ++++C       A  ++  M   G   +AV Y T+   + ++G+  RA ++  EM   
Sbjct: 230 IRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLEC 289

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            + P+  T   +V   CK+G + ++ R   ++ +  V PNL  FN  I+G       D  
Sbjct: 290 CLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRA 349

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            + L  +   G++PDVVT++T++        + + +E    MV  G EP+   ++ +  G
Sbjct: 350 VRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDG 409

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y + G    A  IL      G  P+   + ++++G+C      +AM++++     G+ P+
Sbjct: 410 YCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPS 469

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           +  Y TL+ G  +      A +L+  M EKG +P   T  L+ +    +G   +A  ++ 
Sbjct: 470 IIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIG 529

Query: 440 SA 441
            A
Sbjct: 530 DA 531



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 167/358 (46%), Gaps = 1/358 (0%)

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +++ +K K  G K T  TY ++++  G  GK  E   LL  M  + +    +  Y   +R
Sbjct: 105 LQLIKKTK-QGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMR 163

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +  K  I+EA +   +M      P   +YN +     ++G   +A ++   M++ +V  
Sbjct: 164 FYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVES 223

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T  I +  +C+ G    A+R L  M  L    N V + +++ GF +  D+D   +  
Sbjct: 224 DVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELF 283

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M E  + PDV TF+ ++ A    G + + + +FD ++K G+ P++  F+I  +G  + 
Sbjct: 284 DEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKE 343

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G   +A  +L  + + G+ P+VV + TVI G C   ++  A     KM   G  PN  TY
Sbjct: 344 GSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTY 403

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
            +++ GY +      A  +L+    KG +P + T   + + +   G   +A  V K  
Sbjct: 404 NSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDG 461



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 148/307 (48%), Gaps = 10/307 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G   +A+++    I +G  P + TY TLV    RQ +  S + L++++   GM
Sbjct: 512 INGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGM 571

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I +N ++N   ++   +E M+IF+ M + GC P   TYNT+I+   N  K  E++ 
Sbjct: 572 TPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVD 631

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS-GIQPDAVTYNTLARA 179
           LL  M + K + P+  ++  L+  +C    ++ A+ +   M     +     TYN +  A
Sbjct: 632 LLGEM-KSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISA 690

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           +++      A ++  EM+ N   P+  T  +++ G+CK GN+    +FL    E    P+
Sbjct: 691 FSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPS 750

Query: 240 LVVFNSLIKGFL---DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           L  F  ++        ++++ G+   + LM +  + PD V  +TI +A     +     E
Sbjct: 751 LTTFGRVLNCLCVEHKVQEAVGI---IHLMVQKDIVPDTV--NTIFEADKKGHITYHAYE 805

Query: 297 IFDDMVK 303
              D V+
Sbjct: 806 FLYDGVR 812



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 158/359 (44%), Gaps = 39/359 (10%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N     G P +A  +F   + +G RP++I Y TL+  L +Q      L L++++ + G 
Sbjct: 442 VNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGC 501

Query: 61  KPDSILFNAMINACSESG-----------------------------------NVDEAMK 85
           KPD   +N +IN   + G                                    +D A++
Sbjct: 502 KPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIE 561

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +  +M   G  P   TYNTL+ G     K EE +++ + M++ K   PN  TYN ++ + 
Sbjct: 562 LVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTE-KGCAPNIITYNTIIESL 620

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN-QVRPN 204
           C+   + EA +++ +M + G+ PD V++ TL   + + G+   A  +   M+    V   
Sbjct: 621 CNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHT 680

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T  II+S + ++ NM+ A+R    MK+    P+   +  LI GF    + +   K L 
Sbjct: 681 TATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLL 740

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI--HVFSILAKGYV 321
              E G  P + TF  +++       + +   I   MV+  I PD    +F    KG++
Sbjct: 741 ENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTVNTIFEADKKGHI 799


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 193/374 (51%), Gaps = 1/374 (0%)

Query: 49  LSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
             L+ ++ + G  P+ +++  +I+ C + G +++A  +F +M   G      TY  LI G
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG 242

Query: 109 YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP 168
               G  ++  ++ + M Q+  V PN  TYN ++   C     ++A+ V  +M   G+  
Sbjct: 243 LFKNGIKKQGFEMYEKM-QEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSC 301

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           + VTYNTL     +  +   A +++ +M++  + PN  T   ++ G+C  G +  A+   
Sbjct: 302 NIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLC 361

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
             +K   + P+LV +N L+ GF    D+ G  K +  MEE G+KP  VT++ ++D ++ +
Sbjct: 362 RDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARS 421

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
             M    ++   M + G+ PD+H +S+L  G+   G+  +A  +  SM +  + PN V++
Sbjct: 422 DNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIY 481

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
            T+I G+C      RA+ ++  M E  + PN+ +Y  L+    + ++   AE+L++ M +
Sbjct: 482 NTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMID 541

Query: 409 KGVRPKKSTIQLVA 422
            G+ P  +   L++
Sbjct: 542 SGIDPSDTICNLIS 555



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 209/444 (47%), Gaps = 37/444 (8%)

Query: 42  QKRFKSILSLISKV-EKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS 100
           Q +F +  SL+  + E +  K  S L+  +INA  +S ++D ++  F +M D G  P ++
Sbjct: 71  QSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSN 130

Query: 101 TYNTL----------------------------------IKGYGNVGKPEESLKLLQLMS 126
            +N L                                  IKG    G+ E+S  LL  + 
Sbjct: 131 CFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVEL- 189

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++    PN   Y  L+   C K  IE+A ++ ++M   G+  +  TY  L     + G  
Sbjct: 190 REFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIK 249

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +  +M  +MQ + V PN  T   +++  CK+G  +DA +    M+E  V  N+V +N+L
Sbjct: 250 KQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTL 309

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G      ++  +K +  M+ + + P+++T++T++D + S G +GK   +  D+   G+
Sbjct: 310 IGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGL 369

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P +  +++L  G+ R G+   A  ++  M + G+ P+ V +T +I  +  +  M+ A+ 
Sbjct: 370 SPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQ 429

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           +   M E+G+ P++ TY  L+ G+    Q   A  L + M EK + P +     +   + 
Sbjct: 430 LRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYC 489

Query: 427 AIGLAREAKRVLKSAEEDRQSMPN 450
             G +  A R+ +  EE ++  PN
Sbjct: 490 KEGSSYRALRLFRDMEE-KELAPN 512



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 188/363 (51%), Gaps = 7/363 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L E G  P ++ YTTL+    ++   +    L  ++ K G+  +   +  +I+   ++G 
Sbjct: 189 LREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGI 248

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             +  ++++KM++ G  P   TYN ++      G+ +++ K+   M +++ V  N  TYN
Sbjct: 249 KKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEM-RERGVSCNIVTYN 307

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+   C +    EA  V+ +M +  I P+ +TYNTL   +   G+  +A  +  ++++ 
Sbjct: 308 TLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSR 367

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            + P+  T  ++VSG+C++G+   A + +  M+E  + P+ V +  LI  F     SD +
Sbjct: 368 GLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF---ARSDNM 424

Query: 260 DKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           + A+ L   MEE G+ PDV T+S ++  +   G M +   +F  MV+  +EP+  +++ +
Sbjct: 425 ETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTM 484

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             GY + G   +A  +   M +  + PNV  ++ +I   C   K++ A  + EKM + GI
Sbjct: 485 ILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGI 544

Query: 377 NPN 379
           +P+
Sbjct: 545 DPS 547



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 149/298 (50%), Gaps = 1/298 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E G  P L TY  ++  L +  R K    +  ++ + G+  + + +N +I         +
Sbjct: 261 EHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKAN 320

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           EA K+  +MK     P   TYNTLI G+ +VGK  ++L L + + + + + P+  TYN+L
Sbjct: 321 EANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDL-KSRGLSPSLVTYNVL 379

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           V  +C K     A  +V +M   GI+P  VTY  L   +A+      A Q+   M+   +
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGL 439

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            P+  T  +++ G+C +G M +A R    M E  + PN V++N++I G+     S    +
Sbjct: 440 VPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALR 499

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
               MEE  + P+V ++S ++        + + +++ + M+ +GI+P   + +++++ 
Sbjct: 500 LFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLISRA 557



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 125/247 (50%), Gaps = 5/247 (2%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N L+G    + K +EA+ + + +      P LITY TL+       +    LSL   ++ 
Sbjct: 307 NTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKS 366

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+ P  + +N +++     G+   A K+ ++M++ G KP+  TY  LI  +      E 
Sbjct: 367 RGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMET 426

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +++L   M ++  + P+  TY++L+  +C K  + EA  +   MV   ++P+ V YNT+ 
Sbjct: 427 AIQLRSSM-EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMI 485

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
             Y + G +YRA ++  +M+  ++ PN  +   ++   CKE  +++A   + +M +  + 
Sbjct: 486 LGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGID 545

Query: 238 PNLVVFN 244
           P+  + N
Sbjct: 546 PSDTICN 552



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/388 (20%), Positives = 155/388 (39%), Gaps = 73/388 (18%)

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           S  LL  +++ +  K   R Y +++ A+    S++ +     +MV  G  P +  +N L 
Sbjct: 77  SSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLL 136

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
             +     ++      F     +V  +  + GI++ G C+ G +E +   L  ++E    
Sbjct: 137 -TFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELRE---- 191

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
                                          FG  P+VV ++T++D     G + K +++
Sbjct: 192 -------------------------------FGFSPNVVIYTTLIDGCCKKGEIEKAKDL 220

Query: 298 FDDMVK-----------------------------------AGIEPDIHVFSILAKGYVR 322
           F +M K                                    G+ P+++ ++ +     +
Sbjct: 221 FFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCK 280

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G  + A  +   MR+ GV  N+V + T+I G C  +K   A  + ++M    INPNL T
Sbjct: 281 DGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLIT 340

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           Y TL+ G+    +  +A  L + ++ +G+ P   T  ++   +   G    A +++K  E
Sbjct: 341 YNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEME 400

Query: 443 EDRQSMPNKKD-EIAVESIHRKQNLSAS 469
           E R   P+K    I +++  R  N+  +
Sbjct: 401 E-RGIKPSKVTYTILIDTFARSDNMETA 427


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 126/484 (26%), Positives = 225/484 (46%), Gaps = 43/484 (8%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG+   A+ +F  L  +G  PTL T+ +LV    +   F++I  L+ +++  G+  +  +
Sbjct: 256 KGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQM 315

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I+A  + G   +A    ++M ++ C+P   TYNTLI  + + G+ EE+ KLL+  +
Sbjct: 316 YNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLE-QT 374

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ------------------- 167
             + + PN  TY  LV  +C +    +A + + +M  SG++                   
Sbjct: 375 IRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEV 434

Query: 168 ----------------PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
                           PDA  YN L     + G+   A+ ML EM +  + P+      +
Sbjct: 435 DTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATL 494

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           V G+ + GN+++A +    + E  + P +V +N +IKGF      D     +  M     
Sbjct: 495 VDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHH 554

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            PD+ TFSTI+D +     M    +IF  MVK   +P++  ++ L  GY R GE + AE 
Sbjct: 555 VPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEK 614

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           + + MR +G+ P+VV ++ +I  +C   K+ +A+S +E M      PN   +  L+ G+ 
Sbjct: 615 LFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFT 674

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW-------RAIGLAREAKRVLKSAEED 444
             K    + E   + E      +    +++ D W         I +    +R++K+A + 
Sbjct: 675 NTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQL 734

Query: 445 RQSM 448
           R  M
Sbjct: 735 RNKM 738



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 120/474 (25%), Positives = 227/474 (47%), Gaps = 45/474 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEE--GHRPTLITYTT--LVAALTRQKRFKSILSLISKVE 56
           +N+LV   +   AH +++ +I+   G    +  YTT  +V  L  + R +  + LI    
Sbjct: 176 LNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRW 235

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
             G  P+ + +N +I+   + G V+ A K+F+K+K  G  PT  T+ +L+ G+  +G   
Sbjct: 236 GKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGM-F 294

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           E++ LL L  +D+ +  N + YN ++ A        +A + + +M  +  +PD VTYNTL
Sbjct: 295 EAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTL 354

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
              +   GE   AE++L +     + PN+ T   +V GYCK+G    A  +L  M    +
Sbjct: 355 INHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGL 414

Query: 237 HPNLVVFNSLIKGF---------LDIKDS-----------------DGVDK--------- 261
             +++ + +LI G          L I+D                  +G+ K         
Sbjct: 415 EVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKV 474

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            LT M +  + PD   ++T++D +   G + + +++F  +++ G++P +  ++++ KG+ 
Sbjct: 475 MLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFS 534

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           ++G    A   +  MR+    P++  F+T+I G+     M   + I+  M +    PN+ 
Sbjct: 535 KSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVV 594

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           TY +L+ GY    +   AE+L  +M   G++P   T  ++  S+      +EAK
Sbjct: 595 TYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSF-----CKEAK 643



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/418 (22%), Positives = 174/418 (41%), Gaps = 45/418 (10%)

Query: 73  ACSESGNVDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN- 130
           A ++ G VD+A++++  + K     P+T   N+L+       + E + +L   M    N 
Sbjct: 142 AYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNG 201

Query: 131 --VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
             +  ++ T +I+V+  C K  IE+   ++      G  P+ V YNTL            
Sbjct: 202 DDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTL------------ 249

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
                                  + GYCK+G +E A +   ++K     P L  F SL+ 
Sbjct: 250 -----------------------IDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVN 286

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           GF  +   + +D  L  M++ G+  +V  ++ I+DA    G   K ++   +M +   EP
Sbjct: 287 GFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEP 346

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D+  ++ L   +   GE ++AE +L    + G+ PN + +T ++ G+C   +  +A    
Sbjct: 347 DLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYL 406

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            +M   G+  ++ +Y  L+ G   A +   A  +   M  +G+ P  +   ++ +     
Sbjct: 407 IEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKK 466

Query: 429 GLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQI------PGVV 480
           G    AK +L    +   +         V+   R  NL  +   F  I      PGVV
Sbjct: 467 GKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVV 524



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 88/183 (48%), Gaps = 1/183 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            +  G   EA  +F  +IE+G  P ++ Y  ++   ++     + +  I K+ +    PD
Sbjct: 498 FIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPD 557

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              F+ +I+   +  N++  +KIF  M    CKP   TY +LI GY   G+ + + KL  
Sbjct: 558 IFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFS 617

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           +M +   +KP+  TY+IL+ ++C +  + +A +    M+ +   P+   ++ L   +   
Sbjct: 618 MM-RSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNT 676

Query: 184 GET 186
             T
Sbjct: 677 KAT 679



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/222 (21%), Positives = 89/222 (40%), Gaps = 43/222 (19%)

Query: 266 MEEFGVKPDVVT---FSTIMDAWSSAGLMGKCQEIFDDMVKA------------------ 304
           +EE   K  + T    S ++ A++  GL+ K  E++  +VK                   
Sbjct: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV 180

Query: 305 ----------------------GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
                                  I  D +  SI+ KG    G  +    ++ S    G  
Sbjct: 181 KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCV 240

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           PN+V + T+I G+C   +++ A  +++K+   G  P L+T+ +L+ G+ +       + L
Sbjct: 241 PNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLL 300

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           L  M+++G+         + D+   +G   +AK  LK   E+
Sbjct: 301 LLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSEN 342


>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like, partial [Cucumis sativus]
          Length = 564

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 211/430 (49%), Gaps = 36/430 (8%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           I Y  ++ A  ++       +L+ ++E++G+     +++ M++  +  G+ D+ + +F++
Sbjct: 19  IIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFER 78

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
            K+ G  P+  TY  LI  Y  +GK  ++L++ + M +   +K N +TY++L+  +    
Sbjct: 79  FKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEM-EHAGIKHNMKTYSMLINGFLKLK 137

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
               A+ +   ++  GI+PD V YN +  A+   G+  RA   + EMQ  + +P  RT  
Sbjct: 138 DWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFM 197

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            I+ G+ ++G M+ A+     M+     P +  +N+LI G ++ +  +  ++ L  M   
Sbjct: 198 PIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLA 257

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH------------------ 311
           GV P+  T++TIM  ++S G  GK    F  +   G++ D++                  
Sbjct: 258 GVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSA 317

Query: 312 -----------------VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
                            +++IL  G+ R G+  +A  ++  M++ GV P++  +T+ I+ 
Sbjct: 318 LAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINA 377

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
              A  MQRA    E+M  +G+ PN+KTY TL+ G+  A  P +A    + M+  G++P 
Sbjct: 378 CSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPD 437

Query: 415 KSTIQLVADS 424
           ++    +  S
Sbjct: 438 RAVYHCLMTS 447



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 185/375 (49%), Gaps = 7/375 (1%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F    E G  P++ITY  L+    +  +    L +  ++E  G+K +   ++ +IN   
Sbjct: 75  VFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFL 134

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           +  +   A  IF+ +   G KP    YN +I  +  +GK + ++  ++ M + ++ KP  
Sbjct: 135 KLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRH-KPTT 193

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           RT+  ++  +  K  +++A +V   M  SG  P   TYN L     +  +  +AEQ+L E
Sbjct: 194 RTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDE 253

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M    V PNE T   I+ GY   G+   A  +  ++++  +  ++  + +L+K       
Sbjct: 254 MTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACC---K 310

Query: 256 SDGVDKALTLMEEFG---VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           S  +  AL + +E     +  +   ++ ++D W+  G + +  ++   M + G++PDIH 
Sbjct: 311 SGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHT 370

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++       +AG+ Q+A   +  M+  GV PNV  +TT+I+GW  A   ++A+S +E+M 
Sbjct: 371 YTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMK 430

Query: 373 EIGINPNLKTYETLL 387
             G+ P+   Y  L+
Sbjct: 431 LSGLKPDRAVYHCLM 445



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 180/353 (50%), Gaps = 1/353 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+    GK  +A  +   +   G +  + TY+ L+    + K + +  ++   + KDG+
Sbjct: 95  INLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGI 154

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD +L+N +I A    G +D A+   ++M+    KPTT T+  +I G+   G+ +++L 
Sbjct: 155 KPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALD 214

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +  +M     + P   TYN L+     K  +E+A  ++ +M  +G+ P+  TY T+   Y
Sbjct: 215 VFDMMRMSGCI-PTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGY 273

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A  G+T +A     ++++  ++ +  T   ++   CK G M+ A+     M    +  N 
Sbjct: 274 ASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNT 333

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            ++N LI G+    D       +  M+  GV+PD+ T+++ ++A S AG M +  +  ++
Sbjct: 334 FIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEE 393

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
           M   G++P++  ++ L  G+ RA  P+KA S    M+  G+ P+  ++  +++
Sbjct: 394 MKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMT 446



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/416 (22%), Positives = 178/416 (42%), Gaps = 74/416 (17%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           ++I++  +I A  +  N+D+A  + ++M++ G       Y+T++ GY  VG  ++ L + 
Sbjct: 17  NAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVF 76

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           +   +                                     G+ P  +TY  L   YA+
Sbjct: 77  ERFKE------------------------------------CGLNPSVITYGCLINLYAK 100

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+  +A ++  EM++  ++ N +T  ++++G+ K  +  +A      + +  + P++V+
Sbjct: 101 LGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVL 160

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +N++I  F  +   D     +  M++   KP   TF  I+  ++  G M K  ++FD M 
Sbjct: 161 YNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMR 220

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW------- 355
            +G  P +H ++ L  G V   + +KAE IL  M   GV PN   +TT++ G+       
Sbjct: 221 MSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTG 280

Query: 356 ----------------------------CNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
                                       C + +MQ A+++ ++M    I  N   Y  L+
Sbjct: 281 KAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILI 340

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            G+      W A +L+Q M+ +GV+P    I        A   A + +R  K+ EE
Sbjct: 341 DGWARRGDVWEAADLMQQMKREGVQPD---IHTYTSFINACSKAGDMQRATKTIEE 393



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 126/245 (51%), Gaps = 1/245 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG+  +A  +F+ +   G  PT+ TY  L+  L  +++ +    ++ ++   G+ P+   
Sbjct: 206 KGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHT 265

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +  +++  +  G+  +A   F K++D G +    TY  L+K     G+ + +L + + MS
Sbjct: 266 YTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMS 325

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             +N+  N   YNIL+  W  +  + EA +++ +M   G+QPD  TY +   A ++ G+ 
Sbjct: 326 A-QNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDM 384

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            RA + + EM++  V+PN +T   +++G+ +    E A+     MK   + P+  V++ L
Sbjct: 385 QRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCL 444

Query: 247 IKGFL 251
           +   L
Sbjct: 445 MTSLL 449



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/213 (18%), Positives = 97/213 (45%), Gaps = 2/213 (0%)

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           + + +  I+ A+     M K + +  +M + GI+  I ++  +  GY   G+  K   + 
Sbjct: 17  NAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVF 76

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
              ++ G++P+V+ +  +I+ +    K+ +A+ + ++M   GI  N+KTY  L+ G+ + 
Sbjct: 77  ERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKL 136

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKD 453
           K    A  + + + + G++P       +  ++  +G    A   +K  ++ R     +  
Sbjct: 137 KDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTF 196

Query: 454 EIAVESIHRKQNLSASNSTF--LQIPGVVSSEH 484
              +    RK  +  +   F  +++ G + + H
Sbjct: 197 MPIIHGFARKGEMKKALDVFDMMRMSGCIPTVH 229


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 208/420 (49%), Gaps = 8/420 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +    F  +I  G RPT+ TY  ++  + ++   ++   L  +++  G+ PD++ +
Sbjct: 241 GKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY 300

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N+MI+   + G +D+ +  F++MKD  C+P   TYN LI  +   GK    L+  + M +
Sbjct: 301 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM-K 359

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              +KPN  +Y+ LV A+C +  +++A      M   G+ P+  TY +L  A  + G   
Sbjct: 360 GNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLS 419

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++  EM    V  N  T   ++ G C    M++A     +M    V PNL  +N+LI
Sbjct: 420 DAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI 479

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            GF+  K+   +D+AL L+ E    G+KPD++ + T +    S   +   + + ++M + 
Sbjct: 480 HGFVKAKN---MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKEC 536

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           GI+ +  +++ L   Y ++G P +   +L  M++  +   VV F  +I G C    + +A
Sbjct: 537 GIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKA 596

Query: 365 MSIYEKMC-EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           +  + ++  + G+  N   +  ++ G  +  Q   A  L + M +KG+ P ++    + D
Sbjct: 597 VDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD 656



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/451 (23%), Positives = 210/451 (46%), Gaps = 2/451 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P    +  L + L      +  +   SK+++  + P +   N +++  ++ G  D+  + 
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F+ M  +G +PT  TYN +I      G  E +  L + M + + + P+  TYN ++  + 
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM-KFRGLVPDTVTYNSMIDGFG 308

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               +++      +M     +PD +TYN L   + ++G+     +   EM+ N ++PN  
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           +   +V  +CKEG M+ A++F   M+ + + PN   + SLI     I +     +    M
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            + GV+ +VVT++ ++D    A  M + +E+F  M  AG+ P++  ++ L  G+V+A   
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +A  +L  ++  G+ P+++++ T I G C+  K++ A  +  +M E GI  N   Y TL
Sbjct: 489 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
           +  Y ++  P     LL  M+E  +     T  ++ D      L  +A         D  
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 608

Query: 447 SMPNKKDEIA-VESIHRKQNLSASNSTFLQI 476
              N     A ++ + +   + A+ + F Q+
Sbjct: 609 LQANAAIFTAMIDGLCKDNQVEAATTLFEQM 639



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/494 (22%), Positives = 220/494 (44%), Gaps = 46/494 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ +  +G    A  +F  +   G  P  +TY +++    +  R    +    +++    
Sbjct: 269 IDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCC 328

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD I +NA+IN   + G +   ++ +++MK +G KP   +Y+TL+  +   G  ++++K
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 388

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M +   + PN+ TY  L+ A C   ++ +A+ +  +M+  G++ + VTY  L    
Sbjct: 389 FYVDMRR-VGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 447

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                   AE++  +M    V PN  +   ++ G+ K  NM+ A+  L  +K   + P+L
Sbjct: 448 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 507

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +++ + I G   ++  +     +  M+E G+K + + ++T+MDA+  +G   +   + D+
Sbjct: 508 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 567

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM-RKYGVHPNVVMFTTVISGWCNAV 359
           M +  IE  +  F +L  G  +     KA      +   +G+  N  +FT +I G C   
Sbjct: 568 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 627

Query: 360 KMQRAMSIYE-----------------------------------KMCEIGINPNLKTYE 384
           +++ A +++E                                   KM EIG+  +L  Y 
Sbjct: 628 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 687

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA--------KR 436
           +L+WG     Q  +A   L+ M  +G+ P +     V      +G   EA        K 
Sbjct: 688 SLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKH 747

Query: 437 VLKSAEEDRQSMPN 450
            L +++ D  ++PN
Sbjct: 748 QLLTSDND-NALPN 760


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 210/438 (47%), Gaps = 8/438 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  EA ++F+ +I EG +P ++ Y TL+  L +     + + L+  +EK   +PD
Sbjct: 154 LCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPD 213

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++  +I++  +     +A  +F +M   G  P   T N+L+    N+G+ +    LL 
Sbjct: 214 VVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLN 273

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D  + PN  +   +V A C +  + +A +VV  M  SG++PD VTY  L   +   
Sbjct: 274 EMV-DSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLR 332

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E   A ++   M +    PN  +   +++GYCK   M+ AM     M   ++ PN V +
Sbjct: 333 SEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTY 392

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N+LI G   +     +  A+ L  E    G  PD+VT+  ++D       + K   +   
Sbjct: 393 NTLIHGLCHVGR---LQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKA 449

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +  + ++PDI +++I+  G  RAGE + A  + +++   G+ PNV  +  +  G C    
Sbjct: 450 IEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGL 509

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ +M E   + +  TY T+  G+    +  RA +LL+ M  +G     ST  L
Sbjct: 510 LDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTL 569

Query: 421 VADSWRAIGLAR-EAKRV 437
           +       GL + EA ++
Sbjct: 570 LVGMLSDDGLDQSEAHKL 587



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 205/457 (44%), Gaps = 36/457 (7%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           FN ++     P+++ +  ++ ++T+ KR+ ++LSL  K++  G+  +    N +IN+   
Sbjct: 62  FNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCH 121

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
              V+ A  +  K+   GC+P T+++ TLIKG                            
Sbjct: 122 LNRVNFAFSVLAKILKLGCQPDTASFTTLIKG---------------------------- 153

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
                    C +  I EA ++  KM+  G QPD V Y TL     + G T  A ++L  M
Sbjct: 154 --------LCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSM 205

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
           +    +P+    G ++   CK+     A      M    + PN+V  NSL+    ++ + 
Sbjct: 206 EKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEW 265

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
             V+  L  M +  + P+ ++ +T++DA    G++ +  ++ D M ++G+EPD+  ++ L
Sbjct: 266 KHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTAL 325

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G+    E  +A  +   M   G  PNV  + T+I+G+C   +M +AM ++E+MC   +
Sbjct: 326 IDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKL 385

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            PN  TY TL+ G     +   A  L + M   G  P   T +++ D         +A  
Sbjct: 386 IPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMA 445

Query: 437 VLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF 473
           +LK+ E        +   I ++ + R   L  +   F
Sbjct: 446 LLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLF 482



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 196/417 (47%), Gaps = 1/417 (0%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           T   L+ +     R     S+++K+ K G +PD+  F  +I      G + EA+ +F KM
Sbjct: 111 TLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKM 170

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
              G +P    Y TLI G    G    +++LL+ M +  N +P+   Y  L+ + C    
Sbjct: 171 IWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEK-GNCQPDVVVYGTLIHSLCKDRQ 229

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
             +A+N+  +M+  GI P+ VT N+L  A    GE      +L EM ++++ PN  +   
Sbjct: 230 QTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTT 289

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           +V   CKEG +  A   +  M +  V P++V + +LI G     + D   K   +M   G
Sbjct: 290 VVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKG 349

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
             P+V +++T+++ +     M K   +F++M +  + P+   ++ L  G    G  Q A 
Sbjct: 350 CAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAI 409

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           ++   M   G  P++V +  ++   C    + +AM++ + +    ++P+++ Y  ++ G 
Sbjct: 410 ALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGM 469

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS 447
             A +   A +L   +  KG++P   T  ++       GL  EA ++    +E+  S
Sbjct: 470 CRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACS 526



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 176/379 (46%), Gaps = 7/379 (1%)

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           S+L N   +       +D+A+  F +M      P+   +  ++     V +    L L +
Sbjct: 39  SLLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSR 98

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M     +  N  T N+L+ ++C  N +  A++V+ K++  G QPD  ++ TL +     
Sbjct: 99  KMDS-FGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLE 157

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A  +  +M     +P+      +++G CK G+   A+R L  M++    P++VV+
Sbjct: 158 GQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVY 217

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            +LI      KD     +A  L  E    G+ P++VT ++++ A  + G       + ++
Sbjct: 218 GTLIHSL--CKDRQQT-QAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNE 274

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV + I P+    + +     + G   +A  ++  M + GV P+VV +T +I G C   +
Sbjct: 275 MVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSE 334

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M  A+ +++ M   G  PN+ +Y TL+ GY + ++  +A  L + M  + + P   T   
Sbjct: 335 MDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNT 394

Query: 421 VADSWRAIGLAREAKRVLK 439
           +      +G  ++A  + +
Sbjct: 395 LIHGLCHVGRLQDAIALFR 413



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 139/293 (47%), Gaps = 7/293 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G   +AH + + + + G  P ++TYT L+     +      + +   +   G 
Sbjct: 291 VDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGC 350

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   +N +IN   +   +D+AM +F++M      P T TYNTLI G  +VG+ ++++ 
Sbjct: 351 APNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIA 410

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M     + P+  TY IL+   C    +++A  ++  +  S + PD   Y  +    
Sbjct: 411 LFREMVACGQI-PDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGM 469

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + GE   A  +   + +  ++PN  T  I+  G CK G +++A +    M E     + 
Sbjct: 470 CRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADG 529

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGL 290
             +N++ +GFL    ++   +A+ L+EE    G   DV T + ++   S  GL
Sbjct: 530 CTYNTITQGFL---RNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGL 579



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 69/166 (41%), Gaps = 10/166 (6%)

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           F+T+ DA SS          F+ M+     P I  F+ +     +        S+   M 
Sbjct: 52  FNTLDDALSS----------FNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMD 101

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
            +G+  NV     +I+ +C+  ++  A S+  K+ ++G  P+  ++ TL+ G     Q  
Sbjct: 102 SFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIG 161

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            A  L   M  +G +P       + +     G    A R+L+S E+
Sbjct: 162 EALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEK 207


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 196/387 (50%), Gaps = 7/387 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P ++T+ TL+  L R   F+ +  +++++ + G  PD  ++  +I+   + G+++ A +I
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M   G KP    YNT++KG  +  + +E+ +LL  M Q K+   +D T+NILV  +C
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ-KDCPLDDVTFNILVDFFC 367

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               ++    ++ +M++ G  PD +TY T+   + + G    A  +L  M +   +PN  
Sbjct: 368 QNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTV 427

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           +  I++ G C  G   DA   + +M +    PN V FN+LI  FL  K    V++A+ L+
Sbjct: 428 SYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN-FLCKKGL--VEQAIELL 484

Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           ++    G  PD++++ST++D    AG   +  E+ + MV  GI P+  ++S +A    R 
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G   K   +  +++   +  + V++  VIS  C   +  RA+  +  M   G  PN  TY
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKG 410
             L+ G         A+ELL  +  +G
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 205/432 (47%), Gaps = 6/432 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  +A  + + +  +G  P    Y  ++ A  R   F++ + ++  +   G   D
Sbjct: 121 LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLD 180

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +   N ++NA  E G VDEA+ + +K+   GC+    +YN ++KG     +  +  +L+ 
Sbjct: 181 TGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMD 240

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +  +  PN  T+N L+   C     E    V+ +M   G  PD   Y T+     + 
Sbjct: 241 EMVR-VDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKE 299

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A ++L  M +  ++PN      ++ G C     ++A   L  M + +   + V F
Sbjct: 300 GHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTF 359

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N L+  F      D V + L  M   G  PDV+T++T+++ +   GL+ +   +   M  
Sbjct: 360 NILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G +P+   ++I+ KG   AG    AE +++ M + G  PN V F T+I+  C    +++
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+ + ++M   G +P+L +Y T++ G G+A +   A ELL VM  KG+ P       +  
Sbjct: 480 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNT-----IIY 534

Query: 424 SWRAIGLAREAK 435
           S  A  L+RE +
Sbjct: 535 SSIACALSREGR 546



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/438 (23%), Positives = 208/438 (47%), Gaps = 1/438 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  +G   EA  +   L   G    +++Y  ++  L   KR+  +  L+ ++ +   
Sbjct: 188 LNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDC 247

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + FN +I     +G  +   ++  +M + GC P    Y T+I G    G  E + +
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANE 307

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M     +KPN   YN +++  CS    +EA  ++ +M       D VT+N L   +
Sbjct: 308 ILNRMPS-YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G   R  ++L +M ++   P+  T   +++G+CKEG +++A+  L  M      PN 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +  ++KG          ++ ++ M + G  P+ VTF+T+++     GL+ +  E+   
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  G  PD+  +S +  G  +AG+ ++A  +L  M   G+ PN ++++++        +
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGR 546

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           + + + +++ + +  I  +   Y  ++    +  +  RA +    M   G  P +ST  +
Sbjct: 547 VNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTM 606

Query: 421 VADSWRAIGLAREAKRVL 438
           +     + GLA+EA+ +L
Sbjct: 607 LIKGLASEGLAKEAQELL 624



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 96/411 (23%), Positives = 188/411 (45%), Gaps = 4/411 (0%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
           ++ Y  +VA   R  +  +   L + V    + P++  F  ++      G + +A+++  
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
           +M   GC P    Y+ +++     G    S+++L+ M   K    +    N+++ A C +
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM-HAKGCTLDTGNCNLVLNAICEQ 194

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
             ++EA  ++ K+   G + D V+YN + +           E+++ EM      PN  T 
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             ++   C+ G  E     L +M E    P++ ++ ++I G       +  ++ L  M  
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
           +G+KP+VV ++T++    SA    + +E+  +M +     D   F+IL   + + G   +
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
              +L  M  +G  P+V+ +TTVI+G+C    +  A+ + + M   G  PN  +Y  +L 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           G   A +   AEEL+  M ++G  P   T   + +     GL  +A  +LK
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 159/339 (46%), Gaps = 4/339 (1%)

Query: 102 YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
           YN ++ GY   G+   + +L   +     V PN  T+  +VR  C++  I +A  V+ +M
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAAAVP----VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 162 VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM 221
              G  P    Y+ +  A  + G    + ++L  M       +   C ++++  C++G +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 222 EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
           ++A+  L ++       ++V +N+++KG    K    V++ +  M      P++VTF+T+
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +      GL  +  E+   M + G  PDI +++ +  G  + G  + A  IL  M  YG+
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
            PNVV + TV+ G C+A + + A  +  +M +     +  T+  L+  + +     R  E
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE 377

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
           LL+ M   G  P   T   V + +   GL  EA  +LKS
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 40/207 (19%), Positives = 81/207 (39%)

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           V P+  TF  ++    + G +    E+ D+M   G  P   ++ ++ +   R+G  + + 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +L +M   G   +      V++  C    +  A+ +  K+   G   ++ +Y  +L G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
             AK+    EEL+  M      P   T   +       GL      VL    E   +   
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 451 KKDEIAVESIHRKQNLSASNSTFLQIP 477
           +     ++ I ++ +L  +N    ++P
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMP 313


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 196/387 (50%), Gaps = 7/387 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P ++T+ TL+  L R   F+ +  +++++ + G  PD  ++  +I+   + G+++ A +I
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M   G KP    YNT++KG  +  + +E+ +LL  M Q K+   +D T+NILV  +C
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ-KDCPLDDVTFNILVDFFC 367

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               ++    ++ +M++ G  PD +TY T+   + + G    A  +L  M +   +PN  
Sbjct: 368 QNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTV 427

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           +  I++ G C  G   DA   + +M +    PN V FN+LI  FL  K    V++A+ L+
Sbjct: 428 SYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN-FLCKKGL--VEQAIELL 484

Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           ++    G  PD++++ST++D    AG   +  E+ + MV  GI P+  ++S +A    R 
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G   K   +  +++   +  + V++  VIS  C   +  RA+  +  M   G  PN  TY
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKG 410
             L+ G         A+ELL  +  +G
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 205/432 (47%), Gaps = 6/432 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  +A  + + +  +G  P    Y  ++ A  R   F++ + ++  +   G   D
Sbjct: 121 LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLD 180

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +   N ++NA  E G VDEA+ + +K+   GC+    +YN ++KG     +  +  +L+ 
Sbjct: 181 TGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMD 240

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +  +  PN  T+N L+   C     E    V+ +M   G  PD   Y T+     + 
Sbjct: 241 EMVR-VDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKE 299

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A ++L  M +  ++PN      ++ G C     ++A   L  M + +   + V F
Sbjct: 300 GHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTF 359

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N L+  F      D V + L  M   G  PDV+T++T+++ +   GL+ +   +   M  
Sbjct: 360 NILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G +P+   ++I+ KG   AG    AE +++ M + G  PN V F T+I+  C    +++
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+ + ++M   G +P+L +Y T++ G G+A +   A ELL VM  KG+ P       +  
Sbjct: 480 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNT-----IIY 534

Query: 424 SWRAIGLAREAK 435
           S  A  L+RE +
Sbjct: 535 SSIACALSREGR 546



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/438 (23%), Positives = 208/438 (47%), Gaps = 1/438 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  +G   EA  +   L   G    +++Y  ++  L   KR+  +  L+ ++ +   
Sbjct: 188 LNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDC 247

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + FN +I     +G  +   ++  +M + GC P    Y T+I G    G  E + +
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANE 307

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M     +KPN   YN +++  CS    +EA  ++ +M       D VT+N L   +
Sbjct: 308 ILNRMPS-YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G   R  ++L +M ++   P+  T   +++G+CKEG +++A+  L  M      PN 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +  ++KG          ++ ++ M + G  P+ VTF+T+++     GL+ +  E+   
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  G  PD+  +S +  G  +AG+ ++A  +L  M   G+ PN ++++++        +
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGR 546

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           + + + +++ + +  I  +   Y  ++    +  +  RA +    M   G  P +ST  +
Sbjct: 547 VNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTM 606

Query: 421 VADSWRAIGLAREAKRVL 438
           +     + GLA+EA+ +L
Sbjct: 607 LIKGLASEGLAKEAQELL 624



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 96/411 (23%), Positives = 188/411 (45%), Gaps = 4/411 (0%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
           ++ Y  +VA   R  +  +   L + V    + P++  F  ++      G + +A+++  
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
           +M   GC P    Y+ +++     G    S+++L+ M   K    +    N+++ A C +
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM-HAKGCTLDTGNCNLVLNAICEQ 194

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
             ++EA  ++ K+   G + D V+YN + +           E+++ EM      PN  T 
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             ++   C+ G  E     L +M E    P++ ++ ++I G       +  ++ L  M  
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
           +G+KP+VV ++T++    SA    + +E+  +M +     D   F+IL   + + G   +
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
              +L  M  +G  P+V+ +TTVI+G+C    +  A+ + + M   G  PN  +Y  +L 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           G   A +   AEEL+  M ++G  P   T   + +     GL  +A  +LK
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 159/339 (46%), Gaps = 4/339 (1%)

Query: 102 YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
           YN ++ GY   G+   + +L   +     V PN  T+  +VR  C++  I +A  V+ +M
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAAAVP----VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 162 VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM 221
              G  P    Y+ +  A  + G    + ++L  M       +   C ++++  C++G +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 222 EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
           ++A+  L ++       ++V +N+++KG    K    V++ +  M      P++VTF+T+
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +      GL  +  E+   M + G  PDI +++ +  G  + G  + A  IL  M  YG+
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
            PNVV + TV+ G C+A + + A  +  +M +     +  T+  L+  + +     R  E
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE 377

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
           LL+ M   G  P   T   V + +   GL  EA  +LKS
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 40/207 (19%), Positives = 81/207 (39%)

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           V P+  TF  ++    + G +    E+ D+M   G  P   ++ ++ +   R+G  + + 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +L +M   G   +      V++  C    +  A+ +  K+   G   ++ +Y  +L G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
             AK+    EEL+  M      P   T   +       GL      VL    E   +   
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 451 KKDEIAVESIHRKQNLSASNSTFLQIP 477
           +     ++ I ++ +L  +N    ++P
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMP 313


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/480 (23%), Positives = 218/480 (45%), Gaps = 70/480 (14%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK   A +    + E G + T+  Y++L++   +  + ++  SL  ++  +G+KP+ ++
Sbjct: 403 RGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVI 462

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           + ++I+   + G +  A +++ +M   G  P T T+  LI G  +  +  E+ KL   M 
Sbjct: 463 YTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMV 522

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +  NV PN+ TYN+L+   C + +   A+ ++ +MV  G+ PD  TY  L       G  
Sbjct: 523 E-WNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRV 581

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A + + ++Q  Q + NE     ++ GYCKEG ++DA+     M    V  +LV ++ L
Sbjct: 582 SEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVL 641

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPD-------------------------------- 274
           I G L  +D   +   L  M + G++PD                                
Sbjct: 642 IYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGC 701

Query: 275 ---VVTFSTIMDAWSSAGLMGK----CQEIF----------------------------- 298
              VVT++ +++     GLM K    C+E+                              
Sbjct: 702 LPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQ 761

Query: 299 -DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
             D++  G   +   ++IL +G+ + G  Q+A  +L +M   G+ P+ + ++T+I  +C 
Sbjct: 762 LHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCR 821

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              ++ A+ ++E M   G+NP+   Y  L++G     +  +A EL   M  +GV+P ++T
Sbjct: 822 RGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRAT 881



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 206/429 (48%), Gaps = 1/429 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G  P + T + ++  L R ++F+  L L  ++   G++PD  ++ A++ +  E  +
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
              A ++  +M+ SGC  + +TYN  I+G     +  E++++  L+S  K ++ +  TY 
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSY-KGLRADVGTYC 289

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            LV   C     E    ++ +M+  G  P     + L     + G    A  ++ +++  
Sbjct: 290 TLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKF 349

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            V P+      +++  CK+G +++A      M    + PN V ++ LI  F      D  
Sbjct: 350 GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVA 409

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
              L  M E G+K  V  +S+++      G +   + +FD+M+  G++P++ +++ L  G
Sbjct: 410 LHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISG 469

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y + GE   A  +   M   G+ PN   FT +ISG C+A +M  A  ++ +M E  + PN
Sbjct: 470 YCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPN 529

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             TY  L+ G+ +     RA ELL  M EKG+ P   T + +     + G   EA+  + 
Sbjct: 530 EVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMN 589

Query: 440 SAEEDRQSM 448
             + ++Q +
Sbjct: 590 DLQGEQQKL 598



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 198/413 (47%), Gaps = 1/413 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  I N L  +G R  + TY TLV  L + + F++   +++++ + G  P     + ++
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLV 327

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   + GN+  A  +  K+K  G  P+   YN LI      GK +E+  L   M   K +
Sbjct: 328 DGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGH-KGL 386

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PND TY+IL+ ++C +  ++ A + + KM   GI+     Y++L   + + G+   A+ 
Sbjct: 387 FPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKS 446

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  EM  N ++PN      ++SGYCKEG + +A R  + M    + PN   F +LI G  
Sbjct: 447 LFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLC 506

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                   +K    M E+ V P+ VT++ +++     G   +  E+ D+MV+ G+ PD +
Sbjct: 507 HANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTY 566

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            +  L  G    G   +A   +  ++      N + F+ ++ G+C   ++  A+    +M
Sbjct: 567 TYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREM 626

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
              G+  +L  Y  L++G    +      +LL+ M ++G+RP       + D+
Sbjct: 627 LGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDA 679



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/482 (24%), Positives = 210/482 (43%), Gaps = 70/482 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK--- 57
           +N +   GK  EA  +FN +  +G  P  +TY+ L+ +  ++ +    L  + K+ +   
Sbjct: 362 INSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGI 421

Query: 58  --------------------------------DGMKPDSILFNAMINACSESGNVDEAMK 85
                                           +G+KP+ +++ ++I+   + G +  A +
Sbjct: 422 KATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFR 481

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           ++ +M   G  P T T+  LI G  +  +  E+ KL   M +  NV PN+ TYN+L+   
Sbjct: 482 LYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVE-WNVIPNEVTYNVLIEGH 540

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C + +   A+ ++ +MV  G+ PD  TY  L       G    A + + ++Q  Q + NE
Sbjct: 541 CKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNE 600

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
                ++ GYCKEG ++DA+     M    V  +LV ++ LI G L  +D   +   L  
Sbjct: 601 MCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQ 660

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M + G++PD V ++T++DA + AG +     ++D MV  G  P++  ++ L  G  + G 
Sbjct: 661 MHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGL 720

Query: 326 PQKAESILTSMRKYGVHP----------------------------------NVVMFTTV 351
             KAE +   M      P                                  N V +  +
Sbjct: 721 MDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNIL 780

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I G+C   ++Q A  +   M + GI+P+  +Y T+++ Y        A +L + M  +GV
Sbjct: 781 IRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGV 840

Query: 412 RP 413
            P
Sbjct: 841 NP 842



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 188/417 (45%), Gaps = 1/417 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG    A  + N + + G  P+L  Y  L+ ++ +  +     SL + +   G+ P+ + 
Sbjct: 333 KGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVT 392

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +I++  + G +D A+    KM + G K T   Y++LI G+  +GK   +  L   M 
Sbjct: 393 YSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMI 452

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +  +KPN   Y  L+  +C +  +  A+ + ++M   GI P+  T+  L          
Sbjct: 453 AN-GLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRM 511

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++  EM    V PNE T  +++ G+CKEGN   A   L  M E  + P+   +  L
Sbjct: 512 AEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPL 571

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G           + +  ++    K + + FS ++  +   G +    +   +M+  G+
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGV 631

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
             D+  +S+L  G +R  + +    +L  M   G+ P+ V++TT+I     A  ++ A  
Sbjct: 632 AMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFG 691

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           +++ M   G  PN+ TY  L+ G  +     +AE L + M      P ++T     D
Sbjct: 692 LWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLD 748



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 183/395 (46%), Gaps = 1/395 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A ++F+ ++  G RP +  YT +V +L   K F     +I ++E  G       +N  I 
Sbjct: 199 ALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIR 258

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              ++  V EA++I   +   G +    TY TL+ G   V + E   +++  M +   V 
Sbjct: 259 GLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFV- 317

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P++   + LV     K +I  A+++V K+   G+ P    YN L  +  + G+   AE +
Sbjct: 318 PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESL 377

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
              M +  + PN+ T  I++  +CK G ++ A+ FL +M E+ +   +  ++SLI G   
Sbjct: 378 FNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCK 437

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +            M   G+KP+VV +++++  +   G +     ++ +M   GI P+ + 
Sbjct: 438 LGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYT 497

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           F+ L  G   A    +A  +   M ++ V PN V +  +I G C      RA  + ++M 
Sbjct: 498 FTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMV 557

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           E G+ P+  TY  L+ G     +   A E +  ++
Sbjct: 558 EKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQ 592



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/417 (23%), Positives = 189/417 (45%), Gaps = 35/417 (8%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+ H A  +++ +  +G  P   T+T L++ L    R      L  ++ +  + P+ + 
Sbjct: 473 EGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVT 532

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I    + GN   A ++  +M + G  P T TY  LI G  + G+  E+ + +  + 
Sbjct: 533 YNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDL- 591

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           Q +  K N+  ++ L+  +C +  +++A +   +M+  G+  D V Y+ L     +  + 
Sbjct: 592 QGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDR 651

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
                +L +M +  +RP+      ++    K GN++ A      M      PN+V + +L
Sbjct: 652 RSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTAL 711

Query: 247 IKG-------------------------------FLDIKDSDG-VDKALTLMEEF--GVK 272
           I G                               FLD   S+G ++KA+ L +    G  
Sbjct: 712 INGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFL 771

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            + VT++ ++  +   G + +  E+  +M+ +GI PD   +S +   Y R G+ ++A  +
Sbjct: 772 ANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKL 831

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             SM   GV+P+ V +  +I G C   ++ +A  + + M   G+ PN  TY +L+ G
Sbjct: 832 WESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 888



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 168/352 (47%), Gaps = 6/352 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G    A  + + ++E+G  P   TY  L++ L    R       ++ ++ +  K + + 
Sbjct: 543 EGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMC 602

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F+A+++   + G +D+A+   ++M   G       Y+ LI G   + + ++   ++ L+ 
Sbjct: 603 FSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYG---ILRQQDRRSIIDLLK 659

Query: 127 Q--DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           Q  D+ ++P++  Y  ++ A     +++ A+ +   MV+ G  P+ VTY  L     + G
Sbjct: 660 QMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIG 719

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
              +AE +  EM  +   PN+ T    +     EGN+E A++    + E     N V +N
Sbjct: 720 LMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYN 778

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            LI+GF  +       + L  M + G+ PD +++STI+  +   G + +  ++++ M+  
Sbjct: 779 ILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNR 838

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           G+ PD   ++ L  G    GE  KA  +   M + GV PN   + ++I G C
Sbjct: 839 GVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 2/151 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G   +A  + + L+E G     +TY  L+    +  R +    ++  +   G+
Sbjct: 747 LDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGI 805

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I ++ +I      G++ EA+K+++ M + G  P T  YN LI G    G+  ++ +
Sbjct: 806 SPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFE 865

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
           L   M + + VKPN  TYN L+   C  +S+
Sbjct: 866 LRDDMMR-RGVKPNRATYNSLIHGTCLMSSV 895


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 225/477 (47%), Gaps = 45/477 (9%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTR----------------------- 41
           V   +PH A  IFN +     +P L+T  TL+ AL R                       
Sbjct: 150 VACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVK 209

Query: 42  ---------------QKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
                          + +    + LI K++     PD++ +N +++   + G ++EA  +
Sbjct: 210 VNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDL 269

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
              MK++G  P  +T+N L+ GY  +G  +E+ +++ LM+Q+ NV P+  TYN+L+   C
Sbjct: 270 LLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQN-NVLPDVWTYNMLIGGLC 328

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               I+EA+ +  +M    + PD VTYNTL         + +  +++ +M+   V+PN  
Sbjct: 329 KDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAV 388

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T  ++V  Y KEG M++A   L +M+E    P+ V FN+LI G+     +  + +A  +M
Sbjct: 389 TYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYC---KAGRLSEAFRMM 445

Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           +E    G+K + VT +TI+        +    ++     K G   D   +  L  GY + 
Sbjct: 446 DEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKD 505

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+  +A  +   M++  + P+++ + T+I G C++ K  +++    ++ E G+ P+  TY
Sbjct: 506 GKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTY 565

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            T++ GY    Q  +A +    M +K  +P   T  ++       G+  +A ++  +
Sbjct: 566 NTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNT 622



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 213/456 (46%), Gaps = 39/456 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L  KGK +EA  +   +   G  P   T+  LV+   +    K    +I  + ++ +
Sbjct: 254 LDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNV 313

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +N +I    + G +DEA ++  +M++    P   TYNTLI G  +     +  +
Sbjct: 314 LPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFE 373

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L+  M + K VKPN  TYN++V+ +  +  ++ A N + KM  SG  PD VT+NTL   Y
Sbjct: 374 LIDKM-EGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGY 432

Query: 181 AQYGETYRAEQMLFEMQNNQVRPN-----------------------------------E 205
            + G    A +M+ EM    ++ N                                   E
Sbjct: 433 CKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDE 492

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD-GVDKALT 264
            + G ++ GY K+G   +AM+    MKE E+ P+++ +N++I G      +D  +DK   
Sbjct: 493 VSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNE 552

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
           L+E  G+ PD  T++TI+  +   G + K  +  + MVK   +PD+   +IL +G    G
Sbjct: 553 LLES-GLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEG 611

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              KA  +  +    G   + V + T+ISG C   + + A  +  +M E  + P+  TY 
Sbjct: 612 MLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYN 671

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
            +L    +A +   AEE +  + E+G + +  TI L
Sbjct: 672 AILSALADAGRMKEAEEFMSRIVEQG-KLQDQTISL 706



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 178/354 (50%), Gaps = 14/354 (3%)

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE-SLKLLQ 123
           ++ +  I A         A +IF +MK    KP   T NTLI     V  P + S+ L +
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINAL--VRYPSKPSVYLSK 197

Query: 124 LMSQD---KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            +  D     VK N  T+NIL+   C +N + EA  ++ KM      PD V+YNT+    
Sbjct: 198 AIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVL 257

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A  +L +M+NN + PN  T  I+VSGYCK G +++A + +  M +  V P++
Sbjct: 258 CKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDV 317

Query: 241 VVFNSLIKGFLDIKDSDG-VDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
             +N LI G       DG +D+A  L   ME   + PDVVT++T+++         K  E
Sbjct: 318 WTYNMLIGGLC----KDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFE 373

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           + D M   G++P+   ++++ K YV+ G+   A + L  M + G  P+ V F T+I+G+C
Sbjct: 374 LIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYC 433

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
            A ++  A  + ++M   G+  N  T  T+L      ++   A +LL    ++G
Sbjct: 434 KAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRG 487



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 110/454 (24%), Positives = 200/454 (44%), Gaps = 71/454 (15%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N+L+G     GK  EA  + + +      P ++TY TL+              LI K+E 
Sbjct: 321 NMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEG 380

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+KP+++ +N ++    + G +D A    +KM++SG  P   T+NTLI GY   G+  E
Sbjct: 381 KGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSE 440

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           + +++  MS+ K +K N  T N ++   C +  +++A+ ++      G   D V+Y TL 
Sbjct: 441 AFRMMDEMSR-KGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLI 499

Query: 178 RAYAQYGETYRAEQMLFEMQNNQV-----------------------------------R 202
             Y + G++  A ++  EM+  ++                                    
Sbjct: 500 MGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLV 559

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG-VDK 261
           P+E T   I+ GYC+EG +E A +F  +M +    P+L   N L++G      ++G +DK
Sbjct: 560 PDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLC----TEGMLDK 615

Query: 262 ALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
           AL L   +   G   D VT++TI+          +  ++  +M +  + PD + ++ +  
Sbjct: 616 ALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILS 675

Query: 319 GYVRAGEPQKAESILTSMRKYG-----------------------VHPNVVMFTTVISGW 355
               AG  ++AE  ++ + + G                         PN V F+  I+  
Sbjct: 676 ALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINEL 735

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           C   K + AM + ++  + GI  +  TY +L+ G
Sbjct: 736 CTQGKYKDAMHMVQESTQKGITLHKSTYISLMEG 769



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 135/282 (47%), Gaps = 5/282 (1%)

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG---YCKEGNME 222
           +Q   V  +T   AY      + A Q+   M+   ++PN  TC  +++    Y  + ++ 
Sbjct: 135 VQSLRVILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVY 194

Query: 223 DAMRFLYRMKELEVHPNLVVFNSLIKG-FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
            +      + +L V  N   FN LI G  ++ K S+ +   +  M++F   PD V+++TI
Sbjct: 195 LSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIG-LIGKMKDFSCFPDNVSYNTI 253

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +D     G + + +++  DM   G+ P+ + F+IL  GY + G  ++A  ++  M +  V
Sbjct: 254 LDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNV 313

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
            P+V  +  +I G C   K+  A  + ++M  + + P++ TY TL+ G  +     +  E
Sbjct: 314 LPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFE 373

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           L+  ME KGV+P   T  +V   +   G    A   L+  EE
Sbjct: 374 LIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEE 415



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 125/273 (45%), Gaps = 26/273 (9%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA  +++ + E+   P++ITY T++  L    +    +  ++++ + G+ PD   +
Sbjct: 506 GKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTY 565

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL-MS 126
           N +I      G V++A +   KM     KP   T N L++G    G  +++LKL    +S
Sbjct: 566 NTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWIS 625

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + K +  +  TYN ++   C ++  EEA++++ +M    + PD  TYN +  A A  G  
Sbjct: 626 KGKAI--DAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRM 683

Query: 187 YRAEQMLF------EMQNNQVR-----------------PNERTCGIIVSGYCKEGNMED 223
             AE+ +       ++Q+  +                  PN  T    ++  C +G  +D
Sbjct: 684 KEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKD 743

Query: 224 AMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
           AM  +    +  +  +   + SL++G +  + S
Sbjct: 744 AMHMVQESTQKGITLHKSTYISLMEGLIKRRKS 776


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/454 (25%), Positives = 210/454 (46%), Gaps = 35/454 (7%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK-- 61
           L   G  + A ++F+ ++     P + T+  ++ AL ++       +L++KV K GM   
Sbjct: 186 LYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSAN 245

Query: 62  --------------------------------PDSILFNAMINACSESGNVDEAMKIFQK 89
                                           PD + +N ++    +   V EA +   +
Sbjct: 246 KFTCNIWIRGLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGR 305

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M + GC P   TYNT+I GY   G  +E+ +LL+  +  K   P+  TY  L+   C++ 
Sbjct: 306 MMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLK-DAVFKGFVPDRVTYCSLINGLCAEG 364

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            IE A  +  +  A  ++PD V YN+L +   + G    A Q++ EM      P+  T  
Sbjct: 365 DIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYN 424

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
           II++G CK GN+ DA   +         P++  FN+LI G+      D   + +  M  +
Sbjct: 425 IIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTY 484

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G+ PDV+T++++++    AG   +  E F++M+  G  P+   ++IL + + +  + ++A
Sbjct: 485 GIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEA 544

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             ++  M + G+ P+ V F T+I G+C    +  A  +++K+ E G +    T+  L+  
Sbjct: 545 SGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGA 604

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           Y        AE++   M  KG +P   T +++ D
Sbjct: 605 YSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVD 638



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/515 (25%), Positives = 226/515 (43%), Gaps = 23/515 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ LV      +AH ++  ++  G  P   T+T  + +     R    L L+  + + G 
Sbjct: 113 MDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGC 172

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
                 +  ++      G+   A  +F +M      P  +T+N ++      G   ES  
Sbjct: 173 DAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGA 232

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  + + + +  N  T NI +R  C    +EEA  +V +M A  + PD VTYNTL R  
Sbjct: 233 LLAKVLK-RGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGL 290

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +   A Q L  M N    P++ T   I+ GYCK G +++A   L         P+ 
Sbjct: 291 CKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDR 350

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V + SLI G     D   +++AL L  E     +KPD+V +++++      GL+    ++
Sbjct: 351 VTYCSLINGLCAEGD---IERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQV 407

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            ++MV+ G  PDI  ++I+  G  + G    A  ++      G  P+V  F T+I G+C 
Sbjct: 408 MNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCK 467

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            +K+  A+ + E+M   GI P++ TY ++L G  +A +     E  + M  KG RP   T
Sbjct: 468 RLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAIT 527

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNL----------- 466
             ++ +++  I    EA  V+    +D            +    R  +L           
Sbjct: 528 YNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLD 587

Query: 467 ----SASNSTFLQIPGVVSSEHNGSSAAKIRSQIV 497
               SA+  TF  + G  SS+ N   A KI  +++
Sbjct: 588 EKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMI 622



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 183/376 (48%), Gaps = 7/376 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA  +    + +G  P  +TY +L+  L  +   +  L L ++ +   +KPD +++
Sbjct: 329 GMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVY 388

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N+++      G +  A+++  +M + GC P   TYN +I G   +G   ++     ++  
Sbjct: 389 NSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDA----AVVMN 444

Query: 128 DKNVK---PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           D  VK   P+  T+N L+  +C +  ++ A  +V +M   GI PD +TYN++     + G
Sbjct: 445 DAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAG 504

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +     +   EM     RPN  T  I++  +CK   +E+A   + RM +  + P+ V FN
Sbjct: 505 KAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFN 564

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +LI GF    D DG       ++E G      TF+ ++ A+SS   M   ++IF +M+  
Sbjct: 565 TLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISK 624

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G +PD++ + IL  G  +A    +A + L  M   G  P++  F  +++      ++  A
Sbjct: 625 GYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEA 684

Query: 365 MSIYEKMCEIGINPNL 380
           ++I   M  +G+ P +
Sbjct: 685 VAIIHIMVRMGVVPEV 700



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 181/392 (46%), Gaps = 1/392 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P ++TY TL+  L +  + +     + ++   G  PD   +N +I+   +SG + EA ++
Sbjct: 278 PDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATEL 337

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            +     G  P   TY +LI G    G  E +L+L    +Q K++KP+   YN LV+  C
Sbjct: 338 LKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFN-EAQAKDLKPDLVVYNSLVKGLC 396

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            +  I  A  V+ +MV  G  PD  TYN +     + G    A  ++ +       P+  
Sbjct: 397 RQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVF 456

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   ++ GYCK   ++ A++ + RM    + P+++ +NS++ G      +  V++    M
Sbjct: 457 TFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEM 516

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              G +P+ +T++ +++ +     + +   +   M + G+ PD   F+ L  G+ R G+ 
Sbjct: 517 ILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDL 576

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             A  +   + + G       F  +I  + + + MQ A  I+ +M   G  P+L TY  L
Sbjct: 577 DGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRIL 636

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
           + G  +A    RA   L  M  KG  P  +T 
Sbjct: 637 VDGLCKAANVDRAYAHLAEMISKGFVPSMATF 668



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 139/277 (50%), Gaps = 3/277 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G   +A  + N  I +G+ P + T+ TL+    ++ +  S L L+ ++   G+
Sbjct: 427 INGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGI 486

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I +N+++N   ++G   E  + F++M   GC+P   TYN LI+ +  + + EE+  
Sbjct: 487 APDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASG 546

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           ++  M QD  V P+  ++N L+  +C    ++ A+ +  K+   G    A T+N L  AY
Sbjct: 547 VIVRMCQDGLV-PDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAY 605

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           +       AE++  EM +   +P+  T  I+V G CK  N++ A   L  M      P++
Sbjct: 606 SSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSM 665

Query: 241 VVFNSLIKGF-LDIKDSDGVDKALTLMEEFGVKPDVV 276
             F  ++    ++ + S+ V   + +M   GV P+VV
Sbjct: 666 ATFGRMLNLLAMNHRVSEAV-AIIHIMVRMGVVPEVV 701


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 224/455 (49%), Gaps = 16/455 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MNILV  G  ++AH ++  + + G +  + TYT  + +  +  R  + L L+  + + G 
Sbjct: 118 MNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGC 177

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             +++ +  ++    +SG  D A ++F +M      P    +N L+      G   ES +
Sbjct: 178 DSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESER 237

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIE---------EAWNVVYKMVASGIQPDAV 171
           LL  + + + V PN  T+NI V+  C + +++         EA   + KMV  G +PD +
Sbjct: 238 LLGKVLK-RGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDL 296

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
           TYN++   Y + G    A ++L +      +P+E T   +++G+CK+G+ + AM      
Sbjct: 297 TYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDG 356

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSA 288
               + P++V++N+LIKG   +     +  AL LM E    G  P++ T++ +++     
Sbjct: 357 LGKGLRPSIVLYNTLIKG---LSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKM 413

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
           G +     + DD +  G  PDI  ++ L  GY +  +   A  ++  M   G+ P+V+ +
Sbjct: 414 GCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITY 473

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
            T+++G C A K +  M I++ M E G  PN+ TY  ++    +AK+   A +LL  M+ 
Sbjct: 474 NTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKS 533

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           KG++P   +   +   +  IG    A ++ +  E+
Sbjct: 534 KGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEK 568



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 122/499 (24%), Positives = 217/499 (43%), Gaps = 86/499 (17%)

Query: 10  PHEAHYIFNCL-IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK----------- 57
           P +A  +FN    E+G + T  TY  +V  L     F+ +  L+S++ +           
Sbjct: 20  PLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAY 79

Query: 58  -DGMK------------------------PDSILFNAMINACSESGNVDEAMKIFQKMKD 92
            + MK                        P     NA++N   E G  ++A K++ +M+D
Sbjct: 80  IEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRD 139

Query: 93  SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ---DKN------------------- 130
            G +    TY   IK +    +P  +L+LL+ M +   D N                   
Sbjct: 140 RGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDH 199

Query: 131 ------------VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
                       + P+   +N LV   C K  + E+  ++ K++  G+ P+  T+N   +
Sbjct: 200 ARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQ 259

Query: 179 AYAQYGETYR---------AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
              + G   R         AE+ L +M N    P++ T   I+ GYCK+G ++DA R L 
Sbjct: 260 GLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLK 319

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWS 286
                   P+   + SLI GF   KD D  D+A+ + ++    G++P +V ++T++   S
Sbjct: 320 DAVFKGFKPDEFTYCSLINGF--CKDGDP-DRAMAVFKDGLGKGLRPSIVLYNTLIKGLS 376

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
             GL+    ++ ++M + G  P+I  ++++  G  + G    A  ++      G  P++ 
Sbjct: 377 QQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIF 436

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            + T+I G+C  +K+  A  +  +M   G+ P++ TY TLL G  +A +     E+ + M
Sbjct: 437 TYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAM 496

Query: 407 EEKGVRPKKSTIQLVADSW 425
           EEKG  P   T  ++ DS 
Sbjct: 497 EEKGCTPNIITYNIIVDSL 515



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 183/402 (45%), Gaps = 42/402 (10%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA      ++  G  P  +TY +++    ++   +    ++      G KPD   + ++I
Sbjct: 278 EAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLI 337

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N   + G+ D AM +F+     G +P+   YNTLIKG    G    +L+L+  M+++  +
Sbjct: 338 NGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCL 397

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PN  TYN+++   C    + +A ++V   +A G  PD  TYNTL               
Sbjct: 398 -PNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTL--------------- 441

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
                               + GYCK+  ++ A   + RM    + P+++ +N+L+ G  
Sbjct: 442 --------------------IDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLC 481

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
               S+ V +    MEE G  P+++T++ I+D+   A  + +  ++  +M   G++PD+ 
Sbjct: 482 KAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVV 541

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRK-YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
            F  L  G+ + G+   A  +   M K Y V      +  ++S +   + M  AM ++  
Sbjct: 542 SFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSV 601

Query: 371 MCEIGINPNLKTYETLLWGY---GEAKQPWRAEELLQVMEEK 409
           M   G +P+  TY  ++ G+   G   Q ++   LL+ ME++
Sbjct: 602 MKNSGCDPDNYTYRVVIDGFCKMGNITQGYKF--LLENMEKR 641



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 183/395 (46%), Gaps = 17/395 (4%)

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           NA++N   E G  ++A K++ +M+D G +    TY   IK +    +P  +L+LL+ M +
Sbjct: 115 NAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPE 174

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                 N   Y  +V         + A  +  +M+A  + PD V +N L     + G  +
Sbjct: 175 -LGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVF 233

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR---------FLYRMKELEVHP 238
            +E++L ++    V PN  T  I V G C+EG ++ A+R         +L +M      P
Sbjct: 234 ESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEP 293

Query: 239 NLVVFNSLIKGFLD---IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           + + +NS+I G+     ++D++ V K        G KPD  T+ ++++ +   G   +  
Sbjct: 294 DDLTYNSIIDGYCKKGMVQDANRVLKDAVFK---GFKPDEFTYCSLINGFCKDGDPDRAM 350

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
            +F D +  G+ P I +++ L KG  + G    A  ++  M + G  PN+  +  VI+G 
Sbjct: 351 AVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGL 410

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C    +  A  + +     G  P++ TY TL+ GY +  +   A E++  M  +G+ P  
Sbjct: 411 CKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDV 470

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            T   + +     G + E   + K+ EE +   PN
Sbjct: 471 ITYNTLLNGLCKAGKSEEVMEIFKAMEE-KGCTPN 504



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 156/325 (48%), Gaps = 26/325 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G   +A ++ +  I +G  P + TY TL+    +Q +  S   +++++   GM
Sbjct: 407 INGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGM 466

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I +N ++N   ++G  +E M+IF+ M++ GC P   TYN ++       K  E++ 
Sbjct: 467 TPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVD 526

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS-GIQPDAVTYNTLARA 179
           LL  M + K +KP+  ++  L   +C    I+ A+ +  +M     +     TYN +  A
Sbjct: 527 LLGEM-KSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSA 585

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           +++      A ++   M+N+   P+  T  +++ G+CK GN+    +FL    E    P+
Sbjct: 586 FSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPS 645

Query: 240 LVVFNSLIKGFLDIKDSDGVDKA---LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           L  F  ++   L +KD   V +A   + LM + G+ P+  T +TI +A            
Sbjct: 646 LTTFGRVLN-CLCVKDK--VHEAVGIIHLMLQKGIVPE--TVNTIFEA------------ 688

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYV 321
             D  V A   P I V  +L KG++
Sbjct: 689 --DKKVVAA--PKILVEDLLKKGHI 709


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 196/373 (52%), Gaps = 14/373 (3%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +I +G  P  +TY  L+  L +  R     +L+SKV      P+ + FN ++N    +G 
Sbjct: 306 MILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG----PNVVHFNTLVNGFVRNGR 361

Query: 80  VDEAMK-IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
           ++EA   ++ KM ++G  P   T++TL+ G    G    +L+L+  M   K  KPN  TY
Sbjct: 362 LNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDA-KGCKPNLNTY 420

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
            IL+  +C K  +EEA  ++ +M+  G   + V YN L  A  ++G+ + A  M  EM +
Sbjct: 421 TILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSS 480

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHPNLVVFNSLIKGFLDIKDSD 257
              +P+  T   ++ G C+   MEDA+  LYR   LE V  N V FN+LI  FL   +  
Sbjct: 481 KGCKPDIFTFNSLIFGLCRVDEMEDALA-LYRDMVLEGVIANSVTFNTLIHAFLRRGE-- 537

Query: 258 GVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
            + +AL L+ +    G   D +T++ ++ A    G + K   +F++M++ G+ P I   +
Sbjct: 538 -IQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCN 596

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
           IL  G+  AG+   A   +  M   G  P++V + ++I+G C   ++Q A++++EK+   
Sbjct: 597 ILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAE 656

Query: 375 GINPNLKTYETLL 387
           GI P+  TY TL+
Sbjct: 657 GIQPDSITYNTLI 669



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/479 (25%), Positives = 218/479 (45%), Gaps = 39/479 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++LV    P  A  +F  ++ +G  P   T+  ++ AL       +   L+  + K G 
Sbjct: 182 LDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGC 241

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+S+++  +I+A S+   VDEA+K+ ++M   GC P  +T+NT+I G+  + +  E  K
Sbjct: 242 VPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAK 301

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW---------NVVY------------ 159
           L+  M   K   PND TY  L+   C    I+EA          NVV+            
Sbjct: 302 LVDRMIL-KGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNG 360

Query: 160 -----------KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
                      KM+ +G  PD  T++TL     + G    A +++ +M     +PN  T 
Sbjct: 361 RLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTY 420

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
            I++ G+CK+G +E+A   L  M       N V +N+LI     +     + +AL +  E
Sbjct: 421 TILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISA---LCKHGKIHEALDMFGE 477

Query: 269 F---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
               G KPD+ TF++++        M     ++ DMV  G+  +   F+ L   ++R GE
Sbjct: 478 MSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGE 537

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            Q+A  ++  M   G   + + +  +I   C    +++ + ++E+M   G+ P++ T   
Sbjct: 538 IQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNI 597

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           L+ G+  A +   A E ++ M  +G  P   T   + +     G  +EA  + +  + +
Sbjct: 598 LINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAE 656



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 174/359 (48%), Gaps = 43/359 (11%)

Query: 1   MNILVGKGKPHEA-HYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG 59
           +N  V  G+ +EA  ++++ +I  G+ P + T++TLV  L ++  F S L L++ ++  G
Sbjct: 353 VNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKG 412

Query: 60  MKPD-----------------------------------SILFNAMINACSESGNVDEAM 84
            KP+                                   ++ +NA+I+A  + G + EA+
Sbjct: 413 CKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEAL 472

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
            +F +M   GCKP   T+N+LI G   V + E++L L + M  +  V  N  T+N L+ A
Sbjct: 473 DMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLE-GVIANSVTFNTLIHA 531

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +  +  I+EA  +V  M+  G   D +TYN L +A  + G   +   +  EM    + P+
Sbjct: 532 FLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPS 591

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             TC I+++G+C  G + +A+ F+  M      P++V +NSLI G   +     + +AL 
Sbjct: 592 IITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLING---LCKRGRIQEALN 648

Query: 265 LMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           L E+    G++PD +T++T++      G       +    V+ G  P+   ++IL   +
Sbjct: 649 LFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNF 707



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 125/255 (49%), Gaps = 1/255 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK HEA  +F  +  +G +P + T+ +L+  L R    +  L+L   +  +G+  +
Sbjct: 462 LCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIAN 521

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           S+ FN +I+A    G + EA+K+   M   GC     TYN LIK     G  E+ L L +
Sbjct: 522 SVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFE 581

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + K + P+  T NIL+  +C+   +  A   +  M+  G  PD VTYN+L     + 
Sbjct: 582 EMIR-KGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKR 640

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A  +  ++Q   ++P+  T   ++   C+EG  +DA   LYR  E    PN V +
Sbjct: 641 GRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTW 700

Query: 244 NSLIKGFLDIKDSDG 258
           N L+  F    +S+G
Sbjct: 701 NILVYNFGKQSNSEG 715



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/368 (22%), Positives = 157/368 (42%), Gaps = 34/368 (9%)

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
           ++  +MK+ G     S +  ++K YG  G P ++ +LL  M      +P+ R+YN+++  
Sbjct: 125 RLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDV 184

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
               N    A NV Y M++ G+ P+  T+  + +A     E   A  +L +M  +   PN
Sbjct: 185 LVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPN 244

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK---------- 254
                 ++    K   +++A++ L  M  +   P++  FN++I GF  +           
Sbjct: 245 SMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVD 304

Query: 255 ----------------------DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMG 292
                                  +  +D+A  L+ +    P+VV F+T+++ +   G + 
Sbjct: 305 RMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVP-GPNVVHFNTLVNGFVRNGRLN 363

Query: 293 KCQE-IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
           +    ++D M+  G  PD+  FS L  G  + G    A  ++  M   G  PN+  +T +
Sbjct: 364 EATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTIL 423

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I G+C   +++ A  I  +M   G + N   Y  L+    +  +   A ++   M  KG 
Sbjct: 424 IDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGC 483

Query: 412 RPKKSTIQ 419
           +P   T  
Sbjct: 484 KPDIFTFN 491



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 36/195 (18%)

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK------------CQE---------- 296
           +D+ L  M+E G+      F  IM  +  AGL G+            C E          
Sbjct: 123 IDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVL 182

Query: 297 --------------IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
                         +F DM+  G+ P+ + F ++ K      E   A  +L  M K+G  
Sbjct: 183 DVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCV 242

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           PN +++ T+I       ++  A+ + E+M  +G  P++ T+ T+++G+    +     +L
Sbjct: 243 PNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKL 302

Query: 403 LQVMEEKGVRPKKST 417
           +  M  KG  P   T
Sbjct: 303 VDRMILKGFTPNDMT 317


>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 827

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 205/410 (50%), Gaps = 5/410 (1%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           ++  L ++ +  +  S+++ + KDG   D   + ++I A + +G   +A+ +F+KM++ G
Sbjct: 188 IITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEG 247

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI-EE 153
           CKPT  TYN ++  YG +G P   +  L    +   V P+D TYN L+ + C + S+ EE
Sbjct: 248 CKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLI-SCCRRGSLYEE 306

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A  V  +M  SG  PD VT+NTL   Y +      A ++L EM+ +   P+  T   ++S
Sbjct: 307 AAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLIS 366

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
            Y ++G + +AM    +M E  + P++  + +L+ GF      +   +    M   G KP
Sbjct: 367 AYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKP 426

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           ++ TF+ ++    + G   +  ++F+++      PDI  ++ L   + + G   +   + 
Sbjct: 427 NICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVF 486

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M++ G  P    F T+IS +      Q+AM++Y++M E G+ P+L +Y  +L      
Sbjct: 487 KEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARG 546

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
               ++E++   M++   +P + T         A   ++E +R+   AEE
Sbjct: 547 GLWEQSEKVFAEMKDGRCKPNELT---YCSLLHAYANSKEIERMHTLAEE 593



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 195/405 (48%), Gaps = 2/405 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L  +GK   A  I N L ++G    +  YT+L+ A     R++  + +  K+E++G 
Sbjct: 189 ITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGC 248

Query: 61  KPDSILFNAMINACSESGNV-DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           KP  I +N ++N   + G    +   +   MK SG  P   TYNTLI         EE+ 
Sbjct: 249 KPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAA 308

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           ++ + M +     P+  T+N L+  +      +EA  V+ +M  SG  P  VTYN+L  A
Sbjct: 309 QVFEEM-KLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISA 367

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           YA+ G    A ++  +M    ++P+  T   ++SG+ K G  E AMR    M+     PN
Sbjct: 368 YARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPN 427

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +  FN+LIK   +      + K    +E     PD+VT++T++  +   G+  +   +F 
Sbjct: 428 ICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFK 487

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M +AG  P+   F+ L   Y R G  Q+A ++   M + GV P++  +  V++      
Sbjct: 488 EMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGG 547

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
             +++  ++ +M +    PN  TY +LL  Y  +K+  R   L +
Sbjct: 548 LWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAE 592



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/453 (23%), Positives = 212/453 (46%), Gaps = 39/453 (8%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +P EA  +   +   G  P+++TY +L++A  R    +  + L  ++ + G+KPD   + 
Sbjct: 338 RPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYT 397

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK-------- 120
            +++   ++G  + AM+IF +M+ +GCKP   T+N LIK +GN G+  E +K        
Sbjct: 398 TLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEIC 457

Query: 121 -----------LLQLMSQD----------KNVK-----PNDRTYNILVRAWCSKNSIEEA 154
                      LL +  Q+          K +K     P   T+N L+ A+    S ++A
Sbjct: 458 NCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQA 517

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
             V  +M+ +G+ PD  +YN +  A A+ G   ++E++  EM++ + +PNE T   ++  
Sbjct: 518 MAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHA 577

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK-- 272
           Y     +E        +      P  V+  +L+   L     D + +     EE   K  
Sbjct: 578 YANSKEIERMHTLAEEIYSGLTEPVPVLLKTLV---LVNSKCDLLMETEHAFEELKKKGS 634

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           PD+ T + ++  +    ++ K  EI + M ++G  P +  ++ L   + R+   +++E +
Sbjct: 635 PDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEV 694

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           L  +   G+ P+++ + TVI  +C   +M+ A  I+  M   G+ P++ TY T +  Y  
Sbjct: 695 LKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFVASYAA 754

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
                 A  +++ M + G +  ++T   + D +
Sbjct: 755 DSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGY 787



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/427 (23%), Positives = 203/427 (47%), Gaps = 2/427 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +F  +   G  P  +T+ TL+    + +R K  + ++ ++E  G  P  + +N++I
Sbjct: 306 EAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLI 365

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +A +  G + EAM++  +M + G KP   TY TL+ G+   G  E ++++   M +    
Sbjct: 366 SAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEM-RAAGC 424

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KPN  T+N L++   ++    E   V  ++      PD VT+NTL   + Q G       
Sbjct: 425 KPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSG 484

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  EM+     P   T   ++S Y + G+ + AM    RM E  V P+L  +N+++    
Sbjct: 485 VFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALA 544

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                +  +K    M++   KP+ +T+ +++ A++++  + +   + +++     EP   
Sbjct: 545 RGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPV 604

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
           +   L     +     + E     ++K G  P++     +I+ +     + +A  I   M
Sbjct: 605 LLKTLVLVNSKCDLLMETEHAFEELKKKG-SPDLSTLNAMIAIYGRRQMVAKANEILNFM 663

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
            E G +P+L TY +L++ +  ++   R+EE+L+ +  KG++P   +   V  ++   G  
Sbjct: 664 NESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRM 723

Query: 432 REAKRVL 438
           ++A R+ 
Sbjct: 724 KDASRIF 730



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 72/135 (53%), Gaps = 1/135 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A+ I N + E G  P+L TY +L+   +R + F+    ++ ++   G+KPD I +N +I
Sbjct: 655 KANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVI 714

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
            A   +G + +A +IF  MK  G  P   TYNT +  Y      E+++ +++ M +    
Sbjct: 715 FAYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAIGVVRYMIK-HGC 773

Query: 132 KPNDRTYNILVRAWC 146
           K N  TYN +V  +C
Sbjct: 774 KRNQNTYNSIVDGYC 788


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/437 (23%), Positives = 211/437 (48%), Gaps = 2/437 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F  +   G  P ++++ + + +L +  R K    +   +   G +P+ + +
Sbjct: 200 GRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTY 259

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +++  +  G   + M  F  MK  G       +  LI  Y   G  +E++ +L  M Q
Sbjct: 260 GILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEM-Q 318

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + + P+  TY+ L+ A C    + +A +   +M+ +G+QP+ V Y++L + +  +G+  
Sbjct: 319 GQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLV 378

Query: 188 RAEQMLFEMQNNQV-RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
           +A+++++EM NN + RPN      IV   CKEG + DA      +K++    ++++FN+L
Sbjct: 379 KAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTL 438

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G+  + +       L  M   G+ PD  T++T+++ +  +G +     +F +M    I
Sbjct: 439 IDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKI 498

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           +P    ++I+  G  RAG    A+ +L  M   G   ++  +  ++ G C       A+ 
Sbjct: 499 KPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIV 558

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           +++K+C + +  N+ T  T++      ++   A++L   + + G+ P  ST  ++  +  
Sbjct: 559 MFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLL 618

Query: 427 AIGLAREAKRVLKSAEE 443
             G   EA  +  S E+
Sbjct: 619 KEGSVEEADNMFSSMEK 635



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 204/415 (49%), Gaps = 3/415 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT+ TY  ++    R +R +  L+   ++ + G+K D    N ++     +   D+A+K+
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 87  F-QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV-KPNDRTYNILVRA 144
             ++M + GC P   +Y  ++K   +  + +++L LL++M++++ V  P+  TYN ++  
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +  +  I +A N+ ++M+  G  PD VT+N++  A  +      AE +L +M +N V PN
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
           + T   ++ GY   G  E+A +    M    + P++V +NS +        S    +   
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M   G +P++VT+  ++  +++ G        F+ M   GI  +  VF+IL   Y + G
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              +A  IL+ M+  G+ P+V  ++T+IS  C   ++  A+  + +M   G+ PN   Y 
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYH 365

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGV-RPKKSTIQLVADSWRAIGLAREAKRVL 438
           +L+ G+       +A+EL+  M   G+ RP  +    +  S    G   +A  + 
Sbjct: 366 SLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIF 420



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 115/457 (25%), Positives = 203/457 (44%), Gaps = 39/457 (8%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG--MKPDSILFNAMINACSES 77
           + E G  P   +Y  ++  L    R +  L L+  + K+     PD + +N +I+   + 
Sbjct: 70  MTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKE 129

Query: 78  GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT 137
           G + +A  ++ +M   G  P   T+N++I         + +  LL+ M  D  V PN  T
Sbjct: 130 GKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMV-DNGVPPNKVT 188

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           Y  ++  + +    EEA  +  +M   G+ PD V++N+   +  ++G +  A ++ + M 
Sbjct: 189 YTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMA 248

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
               RPN  T GI++ GY  EG   D M F   MK   +  N +VF  LI  +      D
Sbjct: 249 AKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMD 308

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
                L+ M+  G+ PDV T+ST++ A    G +    + F+ M+  G++P+  V+  L 
Sbjct: 309 EAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLI 368

Query: 318 KGYVRAGEPQKAESILTSMRKYGV-HPNVVMF---------------------------- 348
           +G+   G+  KA+ ++  M   G+  PN+  F                            
Sbjct: 369 QGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGE 428

Query: 349 -------TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
                   T+I G+C   +M +A S+ + M   GI P+  TY TL+ GY ++ +      
Sbjct: 429 RSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLN 488

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           L + M +K ++P   T  ++ D     G    A+++L
Sbjct: 489 LFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKML 525



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 205/401 (51%), Gaps = 2/401 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  +A  +++ ++++G  P ++T+ +++ AL + +   +   L+ ++  +G+ P+ + 
Sbjct: 129 EGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVT 188

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           + +MI+  S  G  +EA K+F++M   G  P   ++N+ +      G+ +E+ ++   M+
Sbjct: 189 YTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMA 248

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K  +PN  TY IL+  + ++    +  +    M   GI  + + +  L  AYA+ G  
Sbjct: 249 A-KGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMM 307

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A  +L EMQ   + P+  T   ++S  C+ G + DA+    +M    V PN VV++SL
Sbjct: 308 DEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSL 367

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGV-KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           I+GF    D     + +  M   G+ +P++  F++I+ +    G +     IFD +   G
Sbjct: 368 IQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIG 427

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
              DI +F+ L  GY   GE  KA S+L +M   G+ P+   + T+++G+  + ++   +
Sbjct: 428 ERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGL 487

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
           +++ +M +  I P   TY  +L G   A +   A+++L  M
Sbjct: 488 NLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEM 528



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/465 (21%), Positives = 195/465 (41%), Gaps = 77/465 (16%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   G+  EA  IF  +  +GHRP ++TY  L+     +  F  ++S  + ++ DG+
Sbjct: 228 MDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGI 287

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL- 119
             + ++F  +I+A ++ G +DEAM I  +M+  G  P   TY+TLI     +G+  +++ 
Sbjct: 288 VANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVD 347

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGI------------- 166
           K  Q++     V+PN   Y+ L++ +C+   + +A  +VY+M+ +GI             
Sbjct: 348 KFNQMIGT--GVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVH 405

Query: 167 -----------------------QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
                                  + D + +NTL   Y   GE  +A  +L  M +  + P
Sbjct: 406 SICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGP 465

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   +V+GY K G ++D +     M + ++ P  V +N                   
Sbjct: 466 DTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYN------------------- 506

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
                            I+D    AG     Q++  +M+  G    +  ++I+ KG  R 
Sbjct: 507 ----------------IILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRN 550

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
               +A  +   +    V  N+    T+I+      + + A  ++  + + G+ PN  TY
Sbjct: 551 NCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTY 610

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
             ++    +      A+ +   ME+ G  P     +L+ D+ R +
Sbjct: 611 GIMIRNLLKEGSVEEADNMFSSMEKSGCAPCS---RLLNDTIRTL 652



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 120/246 (48%), Gaps = 1/246 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  +AH+IF+ + + G R  +I + TL+             S++  +   G+ PD+  
Sbjct: 410 EGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFT 469

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N ++N   +SG +D+ + +F++M D   KPTT TYN ++ G    G+   + K+L  M 
Sbjct: 470 YNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMI 529

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
                  +  TYNI+++  C  N  +EA  +  K+    ++ +  T NT+  +       
Sbjct: 530 -GCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRR 588

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+ +   + ++ + PN  T GI++    KEG++E+A      M++    P   + N  
Sbjct: 589 EEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDT 648

Query: 247 IKGFLD 252
           I+  L+
Sbjct: 649 IRTLLE 654



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 109/241 (45%), Gaps = 3/241 (1%)

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P   T G++++G C+    E  + F  R+    +  +    N+++K     K +D   K 
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 263 LTL-MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA-GI-EPDIHVFSILAKG 319
           L   M E G  PD  +++ ++          +  ++   M K  G+  PD+  ++ +  G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           + + G+  KA ++   M + G  P+VV   ++I+  C A  +  A  +  +M + G+ PN
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             TY +++ GY    +   A ++ + M  +G+ P   +     DS    G ++EA  +  
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 440 S 440
           S
Sbjct: 246 S 246


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/428 (24%), Positives = 208/428 (48%), Gaps = 7/428 (1%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           + KG       +++ ++  G +P +ITY  L++ L R  R     +++ ++    M PD 
Sbjct: 234 IKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDG 293

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
             ++ + +  S +G+    + +F++    G K    T + L+ G    GK  ++ ++LQ 
Sbjct: 294 FTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQT 353

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           +  +  +      YN L+  +C    +E A+++  +M +  I+PD +TYN L     +  
Sbjct: 354 LV-NSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVE 412

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
               A  ++ EM+ N V P+  T   ++  Y + G +E     L  M+E  + PN+V + 
Sbjct: 413 RITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYG 472

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
           S++  F     +  + +A+ ++++  +K   P    ++ I+DA+   G   +   + + M
Sbjct: 473 SIVNAFCK---NGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKM 529

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
             +G+ P I  +++L KG  +  +  +AE +L S+R YG+ P+V+ + T+IS  C     
Sbjct: 530 KSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNT 589

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            RA+ + ++M + GI P+ +TY  L    G A +    E L Q M +K V P      ++
Sbjct: 590 DRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIM 649

Query: 422 ADSWRAIG 429
            D++   G
Sbjct: 650 VDAYAKCG 657



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 211/444 (47%), Gaps = 9/444 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM-KPDSIL 66
           G+  +    F  L+    RP   T+   V A          + ++ ++  DG   P++  
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I    ++G   +A+K+F +M +    P   TYNT+I G+   G  E   +L   M 
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +   +KPN  TYN+L+   C    + E   V+ +M +  + PD  TY+ L   +++ G++
Sbjct: 251 R-HGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDS 309

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
                +  E     V+    TC I+++G CK+G +  A   L  +    +    V++N+L
Sbjct: 310 QTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTL 369

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G+  I D +G       M+   ++PD +T++ +++       + +  ++  +M K G+
Sbjct: 370 INGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGV 429

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P +  F+ L   Y RAG+ +K   IL+ M++ G+ PNVV + ++++ +C   K+  A++
Sbjct: 430 NPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVA 489

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           I + M    + P  + Y  ++  Y E     +A  L + M+  GV P   T  L+     
Sbjct: 490 ILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIK--- 546

Query: 427 AIGLAREAKRVLKSAEEDRQSMPN 450
             GL ++++  +  AEE   S+ N
Sbjct: 547 --GLCKQSQ--ISEAEELLDSLRN 566



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 172/344 (50%), Gaps = 7/344 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  +A  +   L+  G   T + Y TL+    +    +   S+  +++   +
Sbjct: 335 LNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLI 394

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD I +NA+IN   +   + EA  +  +M+ +G  P+  T+NTLI  YG  G+ E+   
Sbjct: 395 RPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFI 454

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M Q+K +KPN  +Y  +V A+C    I EA  ++  M    + P A  YN +  AY
Sbjct: 455 ILSDM-QEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAY 513

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G T +A  +  +M+++ V P+  T  +++ G CK+  + +A   L  ++   + P++
Sbjct: 514 IECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDV 573

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           + +N+LI       ++   D+AL L +E    G+KP   T+  +  +   AG + + + +
Sbjct: 574 ISYNTLISACCYRSNT---DRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENL 630

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +  M+   + P   +++I+   Y + GE  K E++   M   G+
Sbjct: 631 YQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGI 674



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 107/234 (45%), Gaps = 34/234 (14%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +   I + + E+G +P +++Y ++V A  +  +    ++++  +    + P + ++
Sbjct: 447 GQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVY 506

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM-- 125
           NA+I+A  E G+ D+A  + +KMK SG  P+  TYN LIKG     +  E+ +LL  +  
Sbjct: 507 NAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRN 566

Query: 126 ---------------------SQDK-----------NVKPNDRTYNILVRAWCSKNSIEE 153
                                + D+            +KP+ RTY +L  +      + E
Sbjct: 567 YGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHE 626

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
             N+  +M+   + P +  YN +  AYA+ GE  + E +  EM +  +   + T
Sbjct: 627 MENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIAVGDYT 680


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 206/410 (50%), Gaps = 7/410 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G+ P ++T+TTL+  L  + R      L  +++K G  P+ + +  +I      GN
Sbjct: 152 IMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGN 211

Query: 80  VDEAMKIFQKMKDS------GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP 133
           ++ A+K  Q+M +        C+P   +Y+ +I G   VG  EE++ L   M  D+ V+P
Sbjct: 212 INIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMV-DQGVQP 270

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           N  T+++L+   C +  + +A  ++  M+  GI P+  TY +L + +   G+   A+++ 
Sbjct: 271 NVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELF 330

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
             M +    P+  +  ++++GYCK   +E+AM+    M  + + P++     L+K     
Sbjct: 331 VSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLA 390

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
              D   +   +++ + +  D+      +D     G + +  ++F+++    ++ DI  F
Sbjct: 391 GKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETF 450

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
             L  G  +AG+ + A  +   + + G+ P+ + ++++I G+C   ++ +A  +++KM E
Sbjct: 451 GCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEE 510

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
            G +P+L TY  L+ G+ E+ +  +  +LL  M EK V P      +V D
Sbjct: 511 NGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVED 560



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 105/451 (23%), Positives = 201/451 (44%), Gaps = 47/451 (10%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +AH  F+ ++      ++ ++  L+A L + + +  + SL  ++   G+ PD +  N +I
Sbjct: 79  QAHQFFDLMMR-----SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILI 133

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N       ++E +     +   G  P   T+ TLIKG     +  E+ KL   M Q    
Sbjct: 134 NCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRM-QKLGC 192

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMV------ASGIQPDAVTYNTLARAYAQYGE 185
            PN  TY  L++  C+  +I  A     +M+          +P+ ++Y+ +     + G 
Sbjct: 193 TPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGN 252

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A  +  EM +  V+PN  T  +++   CKEG +  A + L  M ++ + PNL  + S
Sbjct: 253 WEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTS 312

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           LIKGF  + D +   +    M   G +PDV++++ +++ +     + +  ++F++M+  G
Sbjct: 313 LIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVG 372

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM------------------ 347
           + PD+    +L K    AG+   A+ +   ++ Y +  ++ +                  
Sbjct: 373 MWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAM 432

Query: 348 -----------------FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
                            F  +I G C A K++ A  ++EK+ E GI P+   Y +++ G+
Sbjct: 433 KLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGF 492

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            +  Q  +A  L Q MEE G  P   T  ++
Sbjct: 493 CKKGQVDKANILFQKMEENGCSPDLITYSIL 523



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 173/357 (48%), Gaps = 7/357 (1%)

Query: 15  YIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINAC 74
           Y+FNC      RP +I+Y+ ++  L +   ++  + L +++   G++P+ + F+ +I+  
Sbjct: 229 YVFNC------RPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDML 282

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
            + G V +A K+ + M   G  P   TY +LIKG+  VG    + +L   M   K  +P+
Sbjct: 283 CKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPS-KGYEPD 341

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
             +YN+L+  +C    +EEA  +  +M+  G+ PD  T   L +A    G+   A+++  
Sbjct: 342 VISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFR 401

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
            ++   +  +   C I + G CK G + +AM+    ++   +  ++  F  LI G     
Sbjct: 402 VIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAG 461

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
             +   +    + E G++PD + +S+++  +   G + K   +F  M + G  PD+  +S
Sbjct: 462 KLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYS 521

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
           IL +G+  + + +K   +L  M +  V P+  ++  V    C   K +  + + ++ 
Sbjct: 522 ILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRF 578


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 187/379 (49%), Gaps = 13/379 (3%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKD-GMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           TY  LV A       ++ + L+ ++E+  GM P   ++N  ++A  +SG V EAM++ + 
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           MKD  CKP   T+NTLI G    G+ +E+ ++L  M +      N  TYN L+    S  
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMER-SGFAANLVTYNTLINGLSSAG 138

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM-QNNQVRPNERTC 208
              EA  V+  M  +   PD  TYN +   + + GE  RA   L EM Q     P+  T 
Sbjct: 139 RSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTY 195

Query: 209 GIIVSGYCKEGNMEDAMRFLYRM-KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
            I+++G CK  N+  A   L  M    +   ++V FN+L+ G+   +D D   + L+ M 
Sbjct: 196 SILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSML 255

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
           E G  PDVVT+STI+D     G + K   + + MV  G +PD+  +++L  G  +AG+  
Sbjct: 256 EHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMV 315

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           +A  ++  M + G  PN V ++ V  G C   K+  A  +   + + G   ++  +ETLL
Sbjct: 316 EACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375

Query: 388 WGYGE------AKQPWRAE 400
               +      A Q W+ E
Sbjct: 376 LSVKKRLLDRAAFQKWKLE 394



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 177/354 (50%), Gaps = 13/354 (3%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDS-GCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           D+  +  ++ A   +G +  AM + ++M+   G  PT S YN  +      GK  E++++
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           ++ M +D   KP+  T+N L+   C    ++EA  V+ +M  SG   + VTYNTL    +
Sbjct: 77  VKNM-KDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLS 135

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHPNL 240
             G   R+ + +  MQ     P+ +T   I+ G+CK G ++ A  FL  MK+     P+ 
Sbjct: 136 SAG---RSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDT 192

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD----VVTFSTIMDAWSSAGLMGKCQE 296
             ++ LI G      S  + KA  L++E   + D    VV F+T++D +  A  + + +E
Sbjct: 193 FTYSILINGLCK---SSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARE 249

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +   M++ G  PD+  +S +  G  R G+  K  ++L  M   G  P+VV +T +++G C
Sbjct: 250 LLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLC 309

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
            A KM  A  + ++M E G  PN  TY  +  G  +  +   A +LL  + +KG
Sbjct: 310 KAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKG 363



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 164/348 (47%), Gaps = 11/348 (3%)

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
           TY  L++ +   G+ + ++ LL+ M Q   + P    YN  V A C    + EA  VV  
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           M     +PD VT+NTL     + G    A+Q+L EM+ +    N  T   +++G    G 
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF----GVKPDVV 276
             +A+     M+ +   P+   +N++I GF     S  +D+A   +EE     G  PD  
Sbjct: 140 SGEAVLV---MQGMTTTPDTQTYNAIIHGFCK---SGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMV-KAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           T+S +++    +  + K  E+  +M+ +      +  F+ L  GY +A +  +A  +L+S
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M ++G  P+VV ++T+I G C    + +  ++ EKM   G  P++ TY  L+ G  +A +
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
              A  L++ M E G  P   T  LV D    I     A  +L S  +
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRD 361



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 152/314 (48%), Gaps = 6/314 (1%)

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVAS-GIQPDAVTYNTLARAYAQYGETYRAEQM 192
           ++ TY +LVRA C    ++ A +++ +M    G+ P    YN    A  + G+   A ++
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           +  M++   +P+  T   +++G CK G +++A + L  M+      NLV +N+LI G   
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM-VKAGIEPDIH 311
              S    +A+ +M+     PD  T++ I+  +  +G + +     ++M  +AG  PD  
Sbjct: 137 AGRSG---EAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 312 VFSILAKGYVRAGEPQKAESILTSM-RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
            +SIL  G  ++   +KA+ +L  M  +     +VV F T++ G+C A  + RA  +   
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M E G  P++ TY T++ G        +   LL+ M  +G +P   T  ++       G 
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313

Query: 431 AREAKRVLKSAEED 444
             EA R++K   ED
Sbjct: 314 MVEACRLVKRMLED 327



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 136/280 (48%), Gaps = 4/280 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  EA  + + +   G    L+TY TL+  L+   R    + ++  +      PD
Sbjct: 99  LCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTT---TPD 155

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKD-SGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           +  +NA+I+   +SG +D A    ++MK  +GC P T TY+ LI G        ++ +LL
Sbjct: 156 TQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELL 215

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           Q M   K+   +   +N LV  +C    ++ A  ++  M+  G  PD VTY+T+     +
Sbjct: 216 QEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCR 275

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+  +   +L +M +   +P+  T  ++V+G CK G M +A R + RM E    PN V 
Sbjct: 276 CGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVT 335

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIM 282
           ++ +  G   I   D  +  LT + + G   DVV F T++
Sbjct: 336 YSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 200/386 (51%), Gaps = 9/386 (2%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           I+Y TL+  L +    K+ + L+  +E+  +KPD +++N +I++  ++  V EA  ++ +
Sbjct: 175 ISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSE 234

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M      P   TY TLI G+  +G   E++ LL  M   KN+ P+  T++IL+ A   + 
Sbjct: 235 MNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKL-KNINPDVYTFSILIDALGKEG 293

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            ++ A  V+  M+ + ++PD VTYN+L   Y    E   A+ +   M  + V P  ++  
Sbjct: 294 KMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYT 353

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS----DGVDKALTL 265
           I++ G CK   +++A+     MK   V PN + FNSLI G           D VDK    
Sbjct: 354 IMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDK---- 409

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M +     DV+T+S+++DA      + +   +F  M+   I+PD++ ++IL  G  + G 
Sbjct: 410 MRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGR 469

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            + A+ +   +   G H ++  +T +ISG+C A     A+++  KM + G  PN  T++ 
Sbjct: 470 LKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDI 529

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGV 411
           ++    E  +  +AE+LL+ M  +G+
Sbjct: 530 IICALFEKDENDKAEKLLREMIARGL 555



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/428 (24%), Positives = 202/428 (47%), Gaps = 2/428 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G    L+T   L+       +     S+++ + K G  PD I    +I      G V +
Sbjct: 98  KGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKK 157

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+K    +     +    +Y TLI G   +G+ + +++L++ + +++++KP+   YNI++
Sbjct: 158 ALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNL-EERSIKPDVVMYNIII 216

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
            + C    + EA N+  +M A  I P+ VTY TL   +   G    A  +L EM+   + 
Sbjct: 217 DSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNIN 276

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+  T  I++    KEG M+ A   L  M +  V P++V +NSL+ G+  + +       
Sbjct: 277 PDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYV 336

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              M + GV P V +++ ++D      ++ +   +F++M    + P+   F+ L  G  +
Sbjct: 337 FNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCK 396

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           +G       ++  MR      +V+ ++++I   C    + +A+++++KM    I P++ T
Sbjct: 397 SGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYT 456

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           Y  L+ G  +  +   A+E+ Q +  KG      T  ++   +   GL  EA  +L S  
Sbjct: 457 YTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALL-SKM 515

Query: 443 EDRQSMPN 450
           ED   +PN
Sbjct: 516 EDNGCIPN 523



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 137/301 (45%), Gaps = 11/301 (3%)

Query: 16  IFNCLIE----------EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
           I  CLIE          +   P + T++ L+ AL ++ + K+   +++ + K  +KPD +
Sbjct: 256 IMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVV 315

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            +N++++       V  A  +F  M  SG  P   +Y  +I G       +E++ L + M
Sbjct: 316 TYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEM 375

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
              KNV PN  T+N L+   C    I   W++V KM       D +TY++L  A  +   
Sbjct: 376 KH-KNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCH 434

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
             +A  +  +M   +++P+  T  I++ G CK G ++ A      +     H ++  +  
Sbjct: 435 LDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTV 494

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           +I GF      D     L+ ME+ G  P+ +TF  I+ A        K +++  +M+  G
Sbjct: 495 MISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARG 554

Query: 306 I 306
           +
Sbjct: 555 L 555



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 128/265 (48%), Gaps = 1/265 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK   A  +   +++   +P ++TY +LV         K    + + + + G+ P    
Sbjct: 292 EGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQS 351

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +  MI+   ++  VDEA+ +F++MK     P T T+N+LI G    G+      L+  M 
Sbjct: 352 YTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKM- 410

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +D++   +  TY+ L+ A C    +++A  +  KM+   IQPD  TY  L     + G  
Sbjct: 411 RDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRL 470

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+++   +       + RT  +++SG+CK G  ++A+  L +M++    PN + F+ +
Sbjct: 471 KIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDII 530

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGV 271
           I    +  ++D  +K L  M   G+
Sbjct: 531 ICALFEKDENDKAEKLLREMIARGL 555


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 188/380 (49%), Gaps = 8/380 (2%)

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKD-SGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +P+++ +N +I      G V  A+ I ++M++  G  P   TY T+I G+  VG+ +E++
Sbjct: 69  RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 128

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K+   M     VKP    YN L+  +C +  ++ A     +MV  G+     TYN L  A
Sbjct: 129 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 188

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
               G    A +++ EM    + P+  T  I+++G+CKEGN++ A+     M    V   
Sbjct: 189 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 248

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +V + SLI            DK        G++PD+V ++ ++++ S++G + +  EI  
Sbjct: 249 VVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG 308

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M K  I PD   ++ L +G    G   +A  ++  M K G+ P++V + T+ISG+    
Sbjct: 309 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKG 368

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST-I 418
            ++ A+ I  +M   G NP L TY  L+ G  +  Q   AE +++ M E G+ P  ST I
Sbjct: 369 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 428

Query: 419 QLVADSWRAIGLAREAKRVL 438
            L+       GL  E +R +
Sbjct: 429 SLIE------GLTTEDERAI 442



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 88/389 (22%), Positives = 185/389 (47%), Gaps = 42/389 (10%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG---- 59
           L   GKP  A      L+ +  RP  +TY T++A    + R ++ L ++ ++ + G    
Sbjct: 51  LCSAGKPARALE----LLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAP 106

Query: 60  ---------------------------------MKPDSILFNAMINACSESGNVDEAMKI 86
                                            +KP+++++NA+I    + G +D A+  
Sbjct: 107 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 166

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M + G   T +TYN L+      G+  E+ +L++ M   K + P+  TYNIL+   C
Sbjct: 167 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG-GKGLAPDVFTYNILINGHC 225

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            + ++++A  +   M   G++   VTY +L  A ++ G+    +++  E     +RP+  
Sbjct: 226 KEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLV 285

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               +++ +   GN++ A   +  M++  + P+ V +N+L++G   +   D   K +  M
Sbjct: 286 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 345

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            + G++PD+VT++T++  +S  G +     I ++M+  G  P +  ++ L +G  + G+ 
Sbjct: 346 TKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG 405

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGW 355
             AE+++  M + G+ P+   + ++I G 
Sbjct: 406 DDAENMVKEMVENGITPDDSTYISLIEGL 434



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 148/290 (51%), Gaps = 5/290 (1%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N L+G    +GK   A    + ++E G   T+ TY  LV AL    R      L+ ++  
Sbjct: 148 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 207

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+ PD   +N +IN   + GNV +A++IF+ M   G + T  TY +LI      G+ +E
Sbjct: 208 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQE 267

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           + KL     + + ++P+   YN L+ +  +  +I+ A+ ++ +M    I PD VTYNTL 
Sbjct: 268 TDKLFDEAVR-RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 326

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
           R     G    A +++ EM    ++P+  T   ++SGY  +G+++DA+R    M     +
Sbjct: 327 RGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 386

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
           P L+ +N+LI+G       D  +  +  M E G+ PD  T+ ++++  ++
Sbjct: 387 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTT 436



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NIL+     +G   +A  IF  +   G R T++TYT+L+ AL+++ + +    L  +  +
Sbjct: 218 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 277

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G++PD +L+NA+IN+ S SGN+D A +I  +M+     P   TYNTL++G   +G+ +E
Sbjct: 278 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 337

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           + KL+  M++ + ++P+  TYN L+  +  K  +++A  +  +M+  G  P  +TYN L 
Sbjct: 338 ARKLIDEMTK-RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 396

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
           +   + G+   AE M+ EM  N + P++ T   ++ G   E
Sbjct: 397 QGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 437



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 137/310 (44%), Gaps = 39/310 (12%)

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           T+NI++R  CS      A  ++ +M     +P+AVTYNT+   +   G    A  ++ EM
Sbjct: 43  TFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREM 98

Query: 197 -QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
            +   + PN+ T G ++SG+CK G +++A++               VF            
Sbjct: 99  RERGGIAPNQYTYGTVISGWCKVGRVDEAVK---------------VF------------ 131

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
               D+ LT  E   VKP+ V ++ ++  +   G +       D MV+ G+   +  +++
Sbjct: 132 ----DEMLTKGE---VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNL 184

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L       G   +A  ++  M   G+ P+V  +  +I+G C    +++A+ I+E M   G
Sbjct: 185 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 244

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           +   + TY +L++   +  Q    ++L      +G+RP       + +S    G    A 
Sbjct: 245 VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 304

Query: 436 RVLKSAEEDR 445
            ++   E+ R
Sbjct: 305 EIMGEMEKKR 314



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 65/120 (54%), Gaps = 6/120 (5%)

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F DM +  +      F+I+ +    AG+P +A  +L  M +    PN V + TVI+G+C
Sbjct: 28  LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFC 83

Query: 357 NAVKMQRAMSIYEKMCEI-GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG-VRPK 414
           +  ++Q A+ I  +M E  GI PN  TY T++ G+ +  +   A ++   M  KG V+P+
Sbjct: 84  SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 143


>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/489 (23%), Positives = 229/489 (46%), Gaps = 34/489 (6%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +P EA  +   +   G  P+++TY +L++A  R       + L S++ K G+KPD   + 
Sbjct: 341 RPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYT 400

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK-------- 120
            +++   ++G  D AMK+F++M+ +GC+P   T+N LIK +GN G   E +K        
Sbjct: 401 TLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKIC 460

Query: 121 -----------LLQLMSQD----------KNVK-----PNDRTYNILVRAWCSKNSIEEA 154
                      LL +  Q+          K +K     P   T+N L+ A+      ++A
Sbjct: 461 ECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQA 520

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
             +  +M+ +G+ PD  TYN +  A A+ G   ++E++L EM++ + +PNE T   ++  
Sbjct: 521 MAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHA 580

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           Y     +E        +    + P  V+  +L+  +         ++A   + E G  PD
Sbjct: 581 YANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPD 640

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           + T + ++  +    ++ K  EI + +  +G  P +  ++ L   Y R    +K+E IL 
Sbjct: 641 ITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILR 700

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            +   G+ P+++ F TVI  +C   +M+ A  I+ +M + G+ P++ TY T +  Y    
Sbjct: 701 EIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDS 760

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDE 454
               A ++++ M +   +P ++T   + D +  +    EA   + +      S+   ++ 
Sbjct: 761 MFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEANSFISNLRNLDPSVTKDEER 820

Query: 455 IAVESIHRK 463
             +E +++K
Sbjct: 821 RLLERLNKK 829



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 202/410 (49%), Gaps = 5/410 (1%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           +++ L ++ R     SL+  +  DG+  D   + ++I A + +G   EA+ +F+K+++ G
Sbjct: 191 IISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEG 250

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI-EE 153
           C+PT  TYN ++  YG +G P   +  L    +   V P+  TYN L+ + C + S+ EE
Sbjct: 251 CRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISS-CRRGSLYEE 309

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A  V  +M A+G  PD VTYN L   Y +      A ++L EM+ +   P+  T   ++S
Sbjct: 310 AAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLIS 369

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
            Y ++G +++AM    +M +  + P++  + +L+ GF      D   K    M   G +P
Sbjct: 370 AYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQP 429

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           ++ TF+ ++    + G   +  ++F+++      PDI  ++ L   + + G   +   + 
Sbjct: 430 NICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVF 489

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M++ G  P    F T+IS +       +AM+IY +M + G+ P+L TY  +L      
Sbjct: 490 KEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARG 549

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
               ++E++L  M++   +P + T         A    +E +R+   AEE
Sbjct: 550 GLWEQSEKVLAEMKDGRCKPNELT---YCSLLHAYANGKEVERMSALAEE 596



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 106/455 (23%), Positives = 209/455 (45%), Gaps = 37/455 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L  +G+   A  + + L  +G    +  YT+L+ A     R++  + +  K+E++G 
Sbjct: 192 ISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGC 251

Query: 61  K------------------------------------PDSILFNAMINACSESGNVDEAM 84
           +                                    PD   +N +I++C      +EA 
Sbjct: 252 RPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAA 311

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
           ++F++MK +G  P   TYN L+  YG   +P E++++L+ M +     P+  TYN L+ A
Sbjct: 312 EVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEM-EASGFAPSIVTYNSLISA 370

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +     ++EA  +  +MV  GI+PD  TY TL   + + G+   A ++  EM+    +PN
Sbjct: 371 YARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPN 430

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   ++  +   GN  + M+    +K  E  P++V +N+L+  F        V     
Sbjct: 431 ICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFK 490

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M+  G  P+  TF+T++ A+S  G   +   I+  M+ AG+ PD+  ++ +     R G
Sbjct: 491 EMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGG 550

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
             +++E +L  M+     PN + + +++  + N  +++R  ++ E++    I P     +
Sbjct: 551 LWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLK 610

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           TL+  Y ++      E     + E+G  P  +T+ 
Sbjct: 611 TLVLVYSKSDLLTETERAFLELREQGFSPDITTLN 645



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 99/427 (23%), Positives = 204/427 (47%), Gaps = 1/427 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +F  +   G  P  +TY  L+    + +R +  + ++ ++E  G  P  + +N++I
Sbjct: 309 EAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLI 368

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +A +  G +DEAM++  +M   G KP   TY TL+ G+   GK + ++K+ + M +    
Sbjct: 369 SAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEM-RVAGC 427

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +PN  T+N L++   ++ +  E   V  ++      PD VT+NTL   + Q G       
Sbjct: 428 QPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSG 487

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  EM+     P   T   ++S Y + G  + AM    RM +  V P+L  +N+++    
Sbjct: 488 VFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALA 547

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                +  +K L  M++   KP+ +T+ +++ A+++   + +   + +++    IEP   
Sbjct: 548 RGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAV 607

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
           +   L   Y ++    + E     +R+ G  P++     ++S +     + +   I   +
Sbjct: 608 LLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFI 667

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
            + G  P+L TY +L++ Y   +   ++E++L+ +  KG++P   +   V  ++   G  
Sbjct: 668 KDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRM 727

Query: 432 REAKRVL 438
           +EA R+ 
Sbjct: 728 KEASRIF 734



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/368 (20%), Positives = 153/368 (41%), Gaps = 53/368 (14%)

Query: 96  KPTTSTYNTLIKGYG-NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
           KPT  T   + + +  N GKP          S  +      R  + L+      +S++E 
Sbjct: 77  KPTFRTRTRIGRSHDPNRGKP---------WSHHRLSTQGQRILDSLLNPEFDSSSLDEI 127

Query: 155 WNVVYKMVASGIQ--PDAVTYNTLA--RAYAQYGETYRAEQMLFEMQNNQVRPN---ERT 207
              +++  + G+    D+V+++ L   +    Y +   A  + + ++N +   +      
Sbjct: 128 LLQLFETSSDGLNFTSDSVSFDILGIIKGLVFYKKNELALCVFYFVRNREDFASILSNSV 187

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF----------------- 250
             +I+S   KEG    A   L+ ++   VH ++  + SLI  +                 
Sbjct: 188 VAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLE 247

Query: 251 --------------LDIKDSDG-----VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
                         L++    G     +   +  M+  GV PD+ T++T++ +     L 
Sbjct: 248 EEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLY 307

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            +  E+F++M  AG  PD   ++ L   Y ++  P++A  +L  M   G  P++V + ++
Sbjct: 308 EEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSL 367

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           IS +     +  AM +  +M + GI P++ TY TLL G+ +  +   A ++ + M   G 
Sbjct: 368 ISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGC 427

Query: 412 RPKKSTIQ 419
           +P   T  
Sbjct: 428 QPNICTFN 435


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 193/374 (51%), Gaps = 1/374 (0%)

Query: 49  LSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
             L+ ++ + G  P+ +++  +I+ C + G +++A  +F +M   G      TY  LI G
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG 242

Query: 109 YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP 168
               G  ++  ++ + M +D  V PN  TYN ++   C     ++A+ +  +M   G+  
Sbjct: 243 LFKNGIKKQGFEMYEKMQED-GVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSC 301

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           + VTYNTL     +  +   A +++ +M+++ + PN  T   ++ G+C  G +  A+   
Sbjct: 302 NIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC 361

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
             +K   + P+LV +N L+ GF    D+ G  K +  MEE G+KP  +T++ ++D ++  
Sbjct: 362 RDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARM 421

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
             M K  ++   M + G+ PD+H +S+L  G+   G+  +A  +   M    + PN V++
Sbjct: 422 DNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIY 481

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
            T++ G+C      RA+ ++ +M E  + PN+ +Y  ++    + ++   AE L++ M +
Sbjct: 482 NTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMID 541

Query: 409 KGVRPKKSTIQLVA 422
            G+ P  S + L++
Sbjct: 542 TGIDPSDSILNLIS 555



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 209/444 (47%), Gaps = 37/444 (8%)

Query: 42  QKRFKSILSLISKV-EKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS 100
           Q +F +  SL+  V E +  +  S L+  MINA  +S ++D ++  F +M D G  P ++
Sbjct: 71  QSQFFTSSSLLHYVTESETSETKSRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSN 130

Query: 101 TYNTL----------------------------------IKGYGNVGKPEESLKLLQLMS 126
            +N L                                  IKG    G+ E+S  LL  + 
Sbjct: 131 CFNNLLTFVVGSSSFNQWWRFFNESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVEL- 189

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++    PN   Y  L+   C +  IE+A ++ ++M   G+  +  TY  L     + G  
Sbjct: 190 REFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIK 249

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +  +M  +MQ + V PN  T   +++ +CK+G  +DA +    M+E  V  N+V +N+L
Sbjct: 250 KQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTL 309

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G      ++  +K +  M+  G+ P+++T++T++D +   G +GK   +  D+   G+
Sbjct: 310 IGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P +  ++IL  G+ + G+   A  ++  M + G+ P+ + +T +I  +     M++A+ 
Sbjct: 370 SPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQ 429

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           +   M E+G+ P++ TY  L+ G+    Q   A  L ++M  K + P K     +   + 
Sbjct: 430 LRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYC 489

Query: 427 AIGLAREAKRVLKSAEEDRQSMPN 450
             G +  A R+ +  EE ++  PN
Sbjct: 490 KEGSSYRALRLFREMEE-KELPPN 512



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 193/402 (48%), Gaps = 12/402 (2%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLI--SKVEKDGMKPDSILFNAMINAC 74
           FN ++++G  P    +  L+  +     F         SK++ D    D   F  +I  C
Sbjct: 117 FNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIKVD---LDVYSFGIVIKGC 173

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
            E+G ++++  +  ++++ G  P    Y TLI G    G+ E++  L   M +   V  N
Sbjct: 174 CEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLV-AN 232

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
           + TY +L+         ++ + +  KM   G+ P+  TYN +   + + G T  A ++  
Sbjct: 233 EWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFD 292

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           EM+   V  N  T   ++ G C+E    +A + + +MK   ++PNL+ +N+LI GF  + 
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVG 352

Query: 255 DSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
               + KAL+L  +    G+ P +VT++ ++  +   G      ++  +M + GI+P   
Sbjct: 353 K---LGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKI 409

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++IL   + R    +KA  + + M + G+ P+V  ++ +I G+C   +M  A  +++ M
Sbjct: 410 TYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLM 469

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
               + PN   Y T++ GY +    +RA  L + MEEK + P
Sbjct: 470 VAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPP 511



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 153/316 (48%), Gaps = 1/316 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   +   ++  + E+G  P L TY  ++    +  R K    L  ++ + G+  +
Sbjct: 243 LFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCN 302

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +I         +EA K+  +MK  G  P   TYNTLI G+  VGK  ++L L +
Sbjct: 303 IVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            + + + + P+  TYNILV  +C K     A  VV +M   GI+P  +TY  L   +A+ 
Sbjct: 363 DL-KSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARM 421

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
               +A Q+   M+   + P+  T  +++ G+C +G M +A R    M   ++ PN V++
Sbjct: 422 DNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIY 481

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+++ G+     S    +    MEE  + P+V ++  +++         + + + + M+ 
Sbjct: 482 NTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMID 541

Query: 304 AGIEPDIHVFSILAKG 319
            GI+P   + +++++ 
Sbjct: 542 TGIDPSDSILNLISRA 557



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 139/273 (50%), Gaps = 1/273 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN     G+  +A  +F+ + E G    ++TY TL+  L R+ +      ++ +++ DG+
Sbjct: 275 MNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGI 334

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I +N +I+     G + +A+ + + +K  G  P+  TYN L+ G+   G    + K
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGK 394

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +++ M +++ +KP+  TY IL+  +   +++E+A  +   M   G+ PD  TY+ L   +
Sbjct: 395 VVKEM-EERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGF 453

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G+   A ++   M   ++ PN+     +V GYCKEG+   A+R    M+E E+ PN+
Sbjct: 454 CIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNV 513

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
             +  +I+     + S   +  +  M + G+ P
Sbjct: 514 ASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDP 546



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 130/247 (52%), Gaps = 5/247 (2%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N L+G    + K +EA+ + + +  +G  P LITY TL+       +    LSL   ++ 
Sbjct: 307 NTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKS 366

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+ P  + +N +++   + G+   A K+ ++M++ G KP+  TY  LI  +  +   E+
Sbjct: 367 RGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEK 426

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +++L   M ++  + P+  TY++L+  +C K  + EA  +   MVA  ++P+ V YNT+ 
Sbjct: 427 AIQLRSPM-EELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMV 485

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
             Y + G +YRA ++  EM+  ++ PN  +   ++   CKE   ++A   + +M +  + 
Sbjct: 486 LGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGID 545

Query: 238 PNLVVFN 244
           P+  + N
Sbjct: 546 PSDSILN 552


>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Glycine max]
          Length = 794

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 205/409 (50%), Gaps = 3/409 (0%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           +V+ L +  R     SL+  +E DG + D   + ++I A + +    +A+K+F KMK+ G
Sbjct: 150 IVSILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVG 209

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
           C+PT  TYN ++  YG +G P   +  L    +   + P+  TYN L+    + +  EEA
Sbjct: 210 CEPTLITYNAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEA 269

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
            ++  ++  +G +PDAVTYN L   Y +      A ++L +M++N  RP+  T   +VS 
Sbjct: 270 LDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSA 329

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           Y + G +EDA+    +M +  + P++  + +L+ GF++    +   +    M + G KP+
Sbjct: 330 YVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPN 389

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           + TF+ ++  +   G   +  ++F ++      PDI  ++ L   + + G   +   +  
Sbjct: 390 ICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFE 449

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            M++    P    F T+IS +       +AM+ Y++M E G++P+L TY  +L       
Sbjct: 450 EMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGG 509

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
              ++E++L  M++ G +P + T    +    A    RE +R+   AEE
Sbjct: 510 LWEQSEKVLAEMKDGGCKPNEVT---YSSLLHAYANGREVERMNALAEE 555



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 212/428 (49%), Gaps = 1/428 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +F  +   G RP  +TY  L+    + +R K  + ++ ++E +  +P  + +N+++
Sbjct: 268 EALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLV 327

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +A    G +++A+ + +KM D G KP   TY TL+ G+ N GK E ++++ + M +    
Sbjct: 328 SAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRK-VGC 386

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KPN  T+N L++ +  +   EE   V  ++      PD VT+NTL   + Q G       
Sbjct: 387 KPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSG 446

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  EM+ ++  P   T   ++S Y + G+ + AM    RM E  V P+L  +N+++    
Sbjct: 447 VFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLA 506

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                +  +K L  M++ G KP+ VT+S+++ A+++   + +   + +++    I+    
Sbjct: 507 RGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMNALAEEIYSGTIKTHAV 566

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
           +   L     +     + E      RK G+ P+V     ++S +     + +A  I   M
Sbjct: 567 LLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVPKANEILNFM 626

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
            E G+  +L +Y +L++ Y   +   ++E++ + + +KG+ P   +  +V  ++    + 
Sbjct: 627 YESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMM 686

Query: 432 REAKRVLK 439
            EAKR+++
Sbjct: 687 DEAKRIIE 694



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 206/460 (44%), Gaps = 34/460 (7%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +P EA  +   +     RP+++TY +LV+A  R    +  L L  K+   G+KPD   + 
Sbjct: 300 RPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYT 359

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK-------- 120
            +++    +G  + AM++F++M+  GCKP   T+N LIK YG+ GK EE +K        
Sbjct: 360 TLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVC 419

Query: 121 -----------LLQLMSQD---------------KNVKPNDRTYNILVRAWCSKNSIEEA 154
                      LL +  Q+                   P   T+N L+ A+    S ++A
Sbjct: 420 KCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQA 479

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
                +M+ +G+ PD  TYN +    A+ G   ++E++L EM++   +PNE T   ++  
Sbjct: 480 MAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHA 539

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           Y     +E        +    +  + V+  +L+     +      ++A     + G+ PD
Sbjct: 540 YANGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPD 599

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           V T + ++  +    ++ K  EI + M ++G+   +  ++ L   Y R     K+E I  
Sbjct: 600 VTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFR 659

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            +   G+ P+V+ +  VI  +C    M  A  I E+M      P++ TY T +  Y    
Sbjct: 660 EILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADS 719

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
               A ++++ M ++G +P  +T   + D +  + L  EA
Sbjct: 720 MFVEAIDVIRYMIKQGCKPNHNTYNSIVDWYCKLKLRDEA 759



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 112/482 (23%), Positives = 220/482 (45%), Gaps = 72/482 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++IL   G+   A  + + L  +G    +  YT+L+ A    K+++  L +  K+++ G 
Sbjct: 151 VSILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVGC 210

Query: 61  KPDSILFNAMIN-----------------------------------ACSESGNV-DEAM 84
           +P  I +NA++N                                   +C  +G++ +EA+
Sbjct: 211 EPTLITYNAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEAL 270

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
            +F+++K +G +P   TYN L+  YG   +P+E++++L+ M +  + +P+  TYN LV A
Sbjct: 271 DLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQM-ESNSFRPSVVTYNSLVSA 329

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +     +E+A  +  KMV  GI+PD  TY TL   +   G+   A ++  EM+    +PN
Sbjct: 330 YVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPN 389

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   ++  Y   G  E+ ++    +K  +  P++V +N+L+  F        V     
Sbjct: 390 ICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFE 449

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M+     P+  TF+T++ A+   G   +    +  M++AG+ PD+  ++ +     R G
Sbjct: 450 EMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGG 509

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC------------ 372
             +++E +L  M+  G  PN V +++++  + N  +++R  ++ E++             
Sbjct: 510 LWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMNALAEEIYSGTIKTHAVLLK 569

Query: 373 -----------------------EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
                                  + GI+P++ T   +L  YG  K   +A E+L  M E 
Sbjct: 570 TLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVPKANEILNFMYES 629

Query: 410 GV 411
           G+
Sbjct: 630 GL 631



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/391 (22%), Positives = 184/391 (47%), Gaps = 1/391 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            V  GK   A  +F  + + G +P + T+  L+     + +F+ ++ +  +++     PD
Sbjct: 365 FVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPD 424

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N ++    ++G   E   +F++MK S   P   T+NTLI  YG  G  ++++   +
Sbjct: 425 IVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYK 484

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +   V P+  TYN ++         E++  V+ +M   G +P+ VTY++L  AYA  
Sbjct: 485 RMLE-AGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANG 543

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E  R   +  E+ +  ++ +      +V    K   + +  R     ++  + P++   
Sbjct: 544 REVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTS 603

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+++  +   K     ++ L  M E G+   + +++++M  +S      K ++IF +++ 
Sbjct: 604 NAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILD 663

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GIEPD+  ++I+   Y R     +A+ I+  M+     P+VV + T I+ +        
Sbjct: 664 KGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVE 723

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
           A+ +   M + G  PN  TY +++  Y + K
Sbjct: 724 AIDVIRYMIKQGCKPNHNTYNSIVDWYCKLK 754



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 115/272 (42%), Gaps = 36/272 (13%)

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N     +IVS   K G +  A   L+ ++      ++  + SLI  + + K      K  
Sbjct: 143 NGSVIAVIVSILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVF 202

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAG---------------------------LMGKCQ- 295
             M+E G +P ++T++ I++ +   G                           L+  C+ 
Sbjct: 203 GKMKEVGCEPTLITYNAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLCTYNTLISCCRA 262

Query: 296 --------EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
                   ++F+++  AG  PD   ++ L   Y ++  P++A  +L  M      P+VV 
Sbjct: 263 GSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVT 322

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           + +++S +     ++ A+ +  KM + GI P++ TY TLL G+  A +   A E+ + M 
Sbjct: 323 YNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMR 382

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + G +P   T   +   +   G   E  +V K
Sbjct: 383 KVGCKPNICTFNALIKMYGDRGKFEEMVKVFK 414



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 56/113 (49%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           H++  IF  ++++G  P +I+Y  ++ A  R         +I +++     PD + +N  
Sbjct: 652 HKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTF 711

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           I A +      EA+ + + M   GCKP  +TYN+++  Y  +   +E+   +Q
Sbjct: 712 IAAYAADSMFVEAIDVIRYMIKQGCKPNHNTYNSIVDWYCKLKLRDEACSFVQ 764



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 69/169 (40%), Gaps = 40/169 (23%)

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
           + SIL K     G   +A S+L ++   G   +V  +T++I+ + N  K + A+ ++ KM
Sbjct: 150 IVSILGK----TGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKM 205

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPW-----------------------------RA--- 399
            E+G  P L TY  +L  YG+   PW                             RA   
Sbjct: 206 KEVGCEPTLITYNAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSL 265

Query: 400 -EELLQVMEE---KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
            EE L + EE    G RP   T   + D +      +EA  VLK  E +
Sbjct: 266 YEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESN 314


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 204/449 (45%), Gaps = 36/449 (8%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P L++Y T++     + +     +L   +   G+ P+ + +  +I+   ++  VD A  +
Sbjct: 202 PNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGV 261

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           FQ+M D G +P   TY  LI GY ++G+ +E +++L+ MS    ++P+  TY +L+   C
Sbjct: 262 FQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSA-HGLEPDCFTYGLLLDYLC 320

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            K    EA  +   M+  GI+PD   Y  +   YA  G        L  M  N + PN  
Sbjct: 321 KKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHY 380

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMK---------------------------ELE---- 235
              I+   + K+  + +AM    +M+                           EL+    
Sbjct: 381 IFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQM 440

Query: 236 ----VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
               V PN+VVF SL+ G   I   +   +    M   G+ P+VV F+TIM    + G +
Sbjct: 441 INEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRV 500

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            K Q + D M + G  PDI  ++ L +G+   G+  +A  +L  M   G+ PN   + T+
Sbjct: 501 MKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTL 560

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           + G+C   ++  A S++++M   GI P + TY T+L G  + ++   A+EL   M   G 
Sbjct: 561 LHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGK 620

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLKS 440
           +    T  ++ +         EA ++ +S
Sbjct: 621 QWSIYTYNIILNGLSKNNCVDEALKMFQS 649



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/451 (24%), Positives = 207/451 (45%), Gaps = 39/451 (8%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDG-MKPDSILFNAMINACSESGNVDEAMK 85
           P + TY+ LV    R  R +   +    + K G    D ++ N ++    ++  V EAM 
Sbjct: 92  PDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMG 151

Query: 86  IF-QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ----------------- 127
           +  ++M + GC P   +YNTL+KG+ +  + EE+L+LL +M+                  
Sbjct: 152 VLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVI 211

Query: 128 --------------------DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ 167
                               D+ + PN  TY I++   C    ++ A  V  +M+  G++
Sbjct: 212 NGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVR 271

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
           P+ VTY  L   Y   G+     +ML EM  + + P+  T G+++   CK+G   +A + 
Sbjct: 272 PNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKL 331

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
              M    + P++ ++  ++ G+        +   L LM   G+ P+   F+ +  A++ 
Sbjct: 332 FDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAK 391

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
             ++G+  +IF+ M + G+ P++  ++ L     + G    AE     M   GV PN+V+
Sbjct: 392 KAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVV 451

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           FT+++ G C   K ++A  ++ +M   GI+PN+  + T++       +  +A+ L+ +ME
Sbjct: 452 FTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLME 511

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             G RP   +   +      +G   EA ++L
Sbjct: 512 RVGTRPDIISYNALIRGHCLVGKTDEASKLL 542



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/447 (22%), Positives = 200/447 (44%), Gaps = 36/447 (8%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F  +I++G RP ++TYT L+       ++K ++ ++ ++   G++PD   +  +++
Sbjct: 258 AEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLD 317

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              + G   EA K+F  M   G KP  S Y  ++ GY   G   E    L LM  +  + 
Sbjct: 318 YLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGN-GIS 376

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE-- 190
           PN   +NI+  A+  K  I EA ++  KM   G+ P+ V Y TL  A  + G    AE  
Sbjct: 377 PNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELK 436

Query: 191 ---------------------------------QMLFEMQNNQVRPNERTCGIIVSGYCK 217
                                            ++ FEM N  + PN      I+   C 
Sbjct: 437 FNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCT 496

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
           EG +  A R +  M+ +   P+++ +N+LI+G   +  +D   K L +M   G+KP+  T
Sbjct: 497 EGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECT 556

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           ++T++  +   G +     +F +M+  GI P +  ++ +  G  +     +A+ +  +M 
Sbjct: 557 YNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMI 616

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
             G   ++  +  +++G      +  A+ +++ +C   +  ++ T+  ++    +  +  
Sbjct: 617 TSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKE 676

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADS 424
            A  L   +   G+ P  +T +L+A++
Sbjct: 677 DAMNLFATISANGLVPDVTTYRLIAEN 703



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/474 (22%), Positives = 220/474 (46%), Gaps = 11/474 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  KGK  EA  +F+ +I +G +P +  Y  ++     +     + S +  +  +G+
Sbjct: 316 LDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGI 375

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES-L 119
            P+  +FN +  A ++   + EAM IF KM+  G  P    Y TLI     +G+ +++ L
Sbjct: 376 SPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAEL 435

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K  Q++++   V PN   +  LV   C+ +  E+A  + ++MV  GI P+ V +NT+   
Sbjct: 436 KFNQMINE--GVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCN 493

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
               G   +A++++  M+    RP+  +   ++ G+C  G  ++A + L  M  + + PN
Sbjct: 494 LCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPN 553

Query: 240 LVVFNSLIKGFLDIKDSDG-VDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQ 295
              +N+L+ G+      DG +D A ++ +E    G+ P VVT++TI+          + +
Sbjct: 554 ECTYNTLLHGYC----RDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAK 609

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           E++ +M+ +G +  I+ ++I+  G  +     +A  +  S+    +  +++ F  +I   
Sbjct: 610 ELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGAL 669

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
               + + AM+++  +   G+ P++ TY  +     E       + +   ME+ G  P  
Sbjct: 670 LKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNS 729

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSAS 469
             +  +       G    A   L   +E   S+      + +    R+++ + S
Sbjct: 730 LMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSREEHQAKS 783



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 158/375 (42%), Gaps = 51/375 (13%)

Query: 87  FQKMKDSGCK---PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           F +M    C    P   TY+ L+  +  +G+ E       L+ +      +    N L++
Sbjct: 79  FNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLK 138

Query: 144 AWCSKNSIEEAWNVVYK-MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
             C    + EA  V+ + M   G  P+ V+YNTL +                        
Sbjct: 139 GLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLK------------------------ 174

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH---PNLVVFNSLIKGFLDIKDSDG- 258
                      G+C E   E+A+  L+ M + +V    PNLV +N++I GF     ++G 
Sbjct: 175 -----------GFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFF----TEGQ 219

Query: 259 VDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
           VDKA  L   M + G+ P+VVT++ ++D    A ++ + + +F  M+  G+ P+I  ++ 
Sbjct: 220 VDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTC 279

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  GY+  G+ ++   +L  M  +G+ P+   +  ++   C   K   A  +++ M   G
Sbjct: 280 LIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKG 339

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           I P++  Y  +L GY            L +M   G+ P      +V  ++    +  EA 
Sbjct: 340 IKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAM 399

Query: 436 RVLKSAEEDRQSMPN 450
            +     +   S PN
Sbjct: 400 DIFNKMRQQGLS-PN 413


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 187/388 (48%), Gaps = 2/388 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG- 59
           MN     G+ ++A  + + L   G  P ++TYT LV     +K  +    ++ ++ K+  
Sbjct: 285 MNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQ 344

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +  D  +F A+IN   + G +++A ++  +M DS  +     YN +I GY  +G+  E+ 
Sbjct: 345 LVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAH 404

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            +L  M+    V+P+  +YN LV  +C K  + +A+     M+ +G     +TYN L + 
Sbjct: 405 NILHEMT-GVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKG 463

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           +   G    A ++ F M    + PNE +C  ++ G+ K G  E A+          +  N
Sbjct: 464 FCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKN 523

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
              FN++I G   I+     ++ +  M+++   PD++T+ T+   +   G M +   I +
Sbjct: 524 TTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILN 583

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           ++   G  P I  F+ L  G+  A +  K   IL  M   G+ PN V +  +I+GWC   
Sbjct: 584 ELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEG 643

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLL 387
            +  A ++Y +M E G+ PNL    +L+
Sbjct: 644 DLHTAYNLYLEMIEKGLVPNLFICSSLV 671



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 199/425 (46%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G       +F  +   G  P   T   +  A  + K     L  + ++ K G+
Sbjct: 215 LNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGV 274

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + + + ++A++N   E G  ++A ++   +   G  P   TY  L+KGY N    EE+  
Sbjct: 275 EVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEG 334

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           ++Q + ++K +  ++  +  ++  +C    +E+A  ++ +MV S +Q +   YN +   Y
Sbjct: 335 VVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGY 394

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A  +L EM    VRP+  +   +V GYCK+G M  A      M         
Sbjct: 395 CKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATT 454

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +N+L+KGF  +   D   +   LM + G+ P+ ++ ST++D +  +G   K   ++ +
Sbjct: 455 LTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKE 514

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
            +  G+  +   F+ +  G  +     +AE ++  M+++   P+++ + T+ SG+C    
Sbjct: 515 TLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGD 574

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M RA  I  ++  +G  P ++ + +L+ G+  AKQ  +  ++L  M  +G+ P       
Sbjct: 575 MDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGA 634

Query: 421 VADSW 425
           +   W
Sbjct: 635 LIAGW 639



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 100/413 (24%), Positives = 201/413 (48%), Gaps = 2/413 (0%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           ++  L+ AL    +    L +  ++   G +      N+++N  +++G++   + +F++M
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
           + +G  P   T   + K Y  V     +L+ ++ M++   V+ N   Y+ ++  +C    
Sbjct: 235 QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTK-MGVEVNLVAYHAVMNGYCEVGQ 293

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN-QVRPNERTCG 209
             +A  ++  +   G  P+ VTY  L + Y        AE ++ E++ N Q+  +E   G
Sbjct: 294 TNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFG 353

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            +++GYC+ G MEDA R L  M +  +  NL V+N +I G+  +         L  M   
Sbjct: 354 AVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGV 413

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           GV+PD  ++++++D +   GLM K  E ++ M++ G       ++ L KG+   G    A
Sbjct: 414 GVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDA 473

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             +   M K G+ PN +  +T++ G+  + K ++A++++++    G+  N  T+ T++ G
Sbjct: 474 LRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVING 533

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
             + ++   AEEL+  M++    P   T + +   +  IG    A R+L   E
Sbjct: 534 LCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELE 586



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/491 (21%), Positives = 220/491 (44%), Gaps = 62/491 (12%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A  + N +++   +  L  Y  ++    +  R     +++ ++   G++PD+  +
Sbjct: 363 GRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSY 422

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N++++   + G +++A + +  M  +G   TT TYN L+KG+ ++G  +++L+L  LM +
Sbjct: 423 NSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLK 482

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K + PN+ + + L+  +      E+A N+  + +A G+  +  T+NT+     +     
Sbjct: 483 -KGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMP 541

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            AE+++ +M+  +  P+  T   + SGYCK G+M+ A R L  ++ L   P +  FNSLI
Sbjct: 542 EAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLI 601

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G    K    V+  L  M   G+ P+ V +  ++  W   G +     ++ +M++ G+ 
Sbjct: 602 TGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLV 661

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV---------------------- 345
           P++ + S L   + R G+  +A  +L ++    + P++                      
Sbjct: 662 PNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNH 721

Query: 346 ----VMFTTVISGWCNAVKMQRA-----------------------------------MS 366
               +M+  VI G C   +++ A                                     
Sbjct: 722 HSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFD 781

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           + + M  +G+ PN+ TY +L++G  ++ +  RA  L + +  KG+ P   T   + D   
Sbjct: 782 LRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHC 841

Query: 427 AIGLAREAKRV 437
             G   EA ++
Sbjct: 842 KDGYITEAFKL 852



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/412 (22%), Positives = 188/412 (45%), Gaps = 33/412 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  ++   +  G      T+ T++  L + +R      L+ K+++    PD I +
Sbjct: 503 GKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITY 562

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             + +   + G++D A +I  ++++ G  PT   +N+LI G+  + K    +  +     
Sbjct: 563 RTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGH-FIAKQHGKVNDILFEMS 621

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           ++ + PN   Y  L+  WC +  +  A+N+  +M+  G+ P+    ++L   + + G+  
Sbjct: 622 NRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFD 681

Query: 188 RAEQMLFEMQNNQVRPN---------------ERTCG-----------IIVSGYCKEGNM 221
            A  +L  +    + P+               +   G           I++ G CK G +
Sbjct: 682 EANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRI 741

Query: 222 EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTF 278
           EDA   L  +K+     +   ++SLI G      S  VD A  L   M   G+ P++VT+
Sbjct: 742 EDAKNLLADLKDKGFVADNFTYSSLIHG---CSASGFVDVAFDLRDTMLSVGLTPNIVTY 798

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           ++++     +G + +   +F  +   GI P+   ++ L   + + G   +A  +   M +
Sbjct: 799 NSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIE 858

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            G+HP V  ++ +I+G C    M+ A+ + ++M E  ++PN  TY TL+ GY
Sbjct: 859 EGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGY 910



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 185/382 (48%), Gaps = 6/382 (1%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F+ ++ A + +G +D A+++F +M+  GC+ +  + N+++      G    ++ + + M 
Sbjct: 176 FDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM- 234

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           Q     P+  T  I+ +A+C    +  A   V +M   G++ + V Y+ +   Y + G+T
Sbjct: 235 QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQT 294

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA---MRFLYRMKELEVHPNLVVF 243
             A +ML  +      PN  T  ++V GYC E NME+A   ++ + + K+L V  +  VF
Sbjct: 295 NDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVV--DEAVF 352

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            ++I G+  +   +   + L  M +  ++ ++  ++ +++ +   G M +   I  +M  
Sbjct: 353 GAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTG 412

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ PD + ++ L  GY + G   KA     +M + G     + +  ++ G+C+   +  
Sbjct: 413 VGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDD 472

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+ ++  M + GI PN  +  TLL G+ ++ +  +A  L +    +G+    +T   V +
Sbjct: 473 ALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVIN 532

Query: 424 SWRAIGLAREAKRVLKSAEEDR 445
               I    EA+ ++   ++ R
Sbjct: 533 GLCKIERMPEAEELVDKMKQWR 554



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/436 (22%), Positives = 194/436 (44%), Gaps = 27/436 (6%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  ++  ++++G  P  I+ +TL+    +  + +  L+L  +    G+  ++  F
Sbjct: 468 GSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTF 527

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +IN   +   + EA ++  KMK   C P   TY TL  GY  +G  + + ++L  + +
Sbjct: 528 NTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNEL-E 586

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +    P    +N L+          +  +++++M   G+ P+ V Y  L   + + G+ +
Sbjct: 587 NLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLH 646

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL------- 240
            A  +  EM    + PN   C  +VS + ++G  ++A   L  +   ++ P++       
Sbjct: 647 TAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEI 706

Query: 241 -------------------VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
                              +++N +I G   +   +     L  +++ G   D  T+S++
Sbjct: 707 GKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSL 766

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +   S++G +    ++ D M+  G+ P+I  ++ L  G  ++GE  +A S+   +   G+
Sbjct: 767 IHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGI 826

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
            PN + + T+I   C    +  A  + ++M E GI+P + TY  L+ G         A +
Sbjct: 827 SPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIK 886

Query: 402 LLQVMEEKGVRPKKST 417
           LL  M E  V P   T
Sbjct: 887 LLDQMIENNVDPNYVT 902



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 27/277 (9%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD--- 63
           +G  H A+ ++  +IE+G  P L   ++LV+   R+ +F     ++  +    M PD   
Sbjct: 642 EGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISA 701

Query: 64  -----------------------SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS 100
                                   I++N +I    + G +++A  +   +KD G      
Sbjct: 702 PRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNF 761

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
           TY++LI G    G  + +  L   M     + PN  TYN L+   C    +  A ++  K
Sbjct: 762 TYSSLIHGCSASGFVDVAFDLRDTM-LSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKK 820

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           +   GI P+A+TYNTL   + + G    A ++   M    + P   T  I+++G C +G 
Sbjct: 821 LWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGY 880

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
           ME+A++ L +M E  V PN V + +LI+G++  +  D
Sbjct: 881 MEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVD 917



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 126/269 (46%), Gaps = 7/269 (2%)

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
           A +++ L RA A  G+   A Q+  EM+    R + R+C  I++   + G++   +    
Sbjct: 173 AASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFE 232

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE---FGVKPDVVTFSTIMDAWS 286
           +M+     P+      + K +  +K   GV  AL  +EE    GV+ ++V +  +M+ + 
Sbjct: 233 QMQRAGALPDKFTVAIMAKAYCKVK---GVVHALEFVEEMTKMGVEVNLVAYHAVMNGYC 289

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG-VHPNV 345
             G     + + D +   G  P+I  +++L KGY      ++AE ++  +RK   +  + 
Sbjct: 290 EVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDE 349

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
            +F  VI+G+C   +M+ A  +  +M +  +  NL  Y  ++ GY +  +   A  +L  
Sbjct: 350 AVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHE 409

Query: 406 MEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           M   GVRP   +   + D +   GL  +A
Sbjct: 410 MTGVGVRPDTYSYNSLVDGYCKKGLMNKA 438



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/170 (20%), Positives = 74/170 (43%)

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           +F  ++ A ++AG +    ++FD+M   G    +   + +     + G+     ++   M
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
           ++ G  P+      +   +C    +  A+   E+M ++G+  NL  Y  ++ GY E  Q 
Sbjct: 235 QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQT 294

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
             A  +L  +  +G  P   T  L+   +       EA+ V++   +++Q
Sbjct: 295 NDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQ 344



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 51/106 (48%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+   A  +F  L  +G  P  ITY TL+    +         L  ++ ++G+ P 
Sbjct: 805 LCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPT 864

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY 109
              ++ +IN     G ++EA+K+  +M ++   P   TY TLI+GY
Sbjct: 865 VFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGY 910


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 210/424 (49%), Gaps = 2/424 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
            F+ L  +G +P  ++YT+++  L +  R      L +++E +   P +  +N MI    
Sbjct: 137 FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 196

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
            +G  ++A K+ +++++ GC P+  ++N+++   G   K +E+L L ++M +D   +PN 
Sbjct: 197 SAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD--AEPNS 254

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TYNI++   C    +EEA+ ++ +M  + + P+ +T N +     +  +   A ++   
Sbjct: 255 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 314

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
                  P+  T   ++ G  K+G +++A R   +M +   + N VV+ SLI+ F     
Sbjct: 315 ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGR 374

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            +   K    +   G KPD+   +T MD    AG + K + IF+D+   G  PD+  +SI
Sbjct: 375 KEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSI 434

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  G  +AG+ ++  +I  +M++ G   +   +  V+ G+C + K+ +A  I E+M E  
Sbjct: 435 LIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC 494

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           + P + TY  ++ G  +  +   A  L +  + KG+         + D +  +G   EA 
Sbjct: 495 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAY 554

Query: 436 RVLK 439
            +L+
Sbjct: 555 LILE 558



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/469 (24%), Positives = 213/469 (45%), Gaps = 37/469 (7%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +P  A  +   + E G+   +  +TTLV AL R+ +    L+L+ +V+   ++PD +L+N
Sbjct: 60  RPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYN 119

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
             I+   ++GNVD A K F ++K  G KP   +Y ++I      G+  E+ +L   M  +
Sbjct: 120 VCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAE 179

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           ++V P    YN ++  + S    E+A+ ++ ++   G  P  V++N++     +  +   
Sbjct: 180 RSV-PCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDE 238

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A   LFE+      PN  T  II+   C  G +E+A R L  M+   + PNL+  N ++ 
Sbjct: 239 ALS-LFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVD 297

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA---- 304
                +  +   K      + G  PD VT+ +++D     G + +   +F+ M+ A    
Sbjct: 298 RLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNA 357

Query: 305 -------------------------------GIEPDIHVFSILAKGYVRAGEPQKAESIL 333
                                          G +PD+ + +       +AGE +K   I 
Sbjct: 358 NPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIF 417

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             +R YG  P+V  ++ +I G   A + +   +I+  M + G   + + Y  ++ G+ ++
Sbjct: 418 EDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKS 477

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
            +  +A E+L+ M+EK V+P  +T   + D    I    EA  + + A+
Sbjct: 478 GKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 526



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/437 (23%), Positives = 203/437 (46%), Gaps = 7/437 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L   G+  EA+ I + +      P L+T   +V  L + ++ +    +     + G 
Sbjct: 261 IDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGC 320

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + + ++I+   + G VDEA ++F+KM D+G       Y +LI+ +   G+ E+  K
Sbjct: 321 NPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHK 380

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + + + +  KP+    N  +        +E+   +   + + G  PD  +Y+ L    
Sbjct: 381 VFKELIR-RGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 439

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+      +   M+      + R    +V G+CK G +  A   L  MKE  V P +
Sbjct: 440 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 499

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             + +++ G   I   D +D+A  L EE    G++ +VV +S+++D +   G + +   I
Sbjct: 500 ATYGAIVDGLAKI---DRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI 556

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            ++M+K G+ P+++ ++ L    V+A E  +A     SM++    PN   ++ +I+G C 
Sbjct: 557 LEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCR 616

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             K  +A   ++ M + G+ PN+ TY T++ G  +      A  L +  +  G  P  ++
Sbjct: 617 VQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAAS 676

Query: 418 IQLVADSWRAIGLAREA 434
              + +       A EA
Sbjct: 677 FNALIEGMSNANRAMEA 693



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 152/331 (45%), Gaps = 2/331 (0%)

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D+A+     M+    +P  S Y  LI       +PE +L+LL+ M Q+   +     + 
Sbjct: 26  LDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQM-QEVGYEVGVHLFT 84

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            LVRA   +  + +A  +V ++  S ++PD V YN     + + G    A +   E++  
Sbjct: 85  TLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQ 144

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            ++P++ +   ++   CK G + +A     +M+     P    +N++I G+      +  
Sbjct: 145 GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDA 204

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            K L  + E G  P VV+F++I+        + +   +F+ M K   EP+   ++I+   
Sbjct: 205 YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDM 263

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
               G  ++A  IL  M    + PN++    ++   C A K++ A  I+E   + G NP+
Sbjct: 264 LCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPD 323

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
             TY +L+ G G+  Q   A  L + M + G
Sbjct: 324 CVTYCSLIDGLGKKGQVDEAYRLFEKMLDAG 354



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/211 (23%), Positives = 101/211 (47%), Gaps = 1/211 (0%)

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           PN+  C  + +   +   ++DA+  +  M+ L+  P    +  LI    + +  +   + 
Sbjct: 9   PNQ-ACADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALEL 67

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           L  M+E G +  V  F+T++ A +  G +     + D++  + +EPDI ++++    + +
Sbjct: 68  LRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGK 127

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           AG    A      ++  G+ P+ V +T++I   C A ++  A  ++ +M      P    
Sbjct: 128 AGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYA 187

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           Y T++ GYG A +   A +LL+ + E+G  P
Sbjct: 188 YNTMIMGYGSAGRFEDAYKLLERLRERGCIP 218



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/189 (20%), Positives = 87/189 (46%), Gaps = 1/189 (0%)

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           A+ +M     +P    ++ ++ A + A    +  E+   M + G E  +H+F+ L +   
Sbjct: 32  AVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALA 91

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           R G+   A +++  ++   + P++V++   I  +  A  +  A   + ++   G+ P+  
Sbjct: 92  REGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDV 151

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           +Y +++W   +A +   AEEL   ME +   P       +   + + G   +A ++L+  
Sbjct: 152 SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERL 211

Query: 442 EEDRQSMPN 450
            E R  +P+
Sbjct: 212 RE-RGCIPS 219


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 219/446 (49%), Gaps = 5/446 (1%)

Query: 15  YIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINAC 74
           ++F  +   G +   IT   L+ +    ++  S  S+ +K+ K G +PD I +  +I   
Sbjct: 70  HLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGL 129

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
             +G V E++    ++   G K    +Y TLI G   +G+   +L+LL+ + + +  +P+
Sbjct: 130 CLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKI-EGEICRPD 188

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
              YN ++   C    + +A+++  +M    + P+ VTY +L   +   G+  +A  +L 
Sbjct: 189 VVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLN 248

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           EM    V PN  T   +V G CKEG M +A   +  M +  V P++  +N+L+ G+  +K
Sbjct: 249 EMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVK 308

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           ++        +M + GV  DV ++S ++   S   ++ +  ++F+ M    + PD+  +S
Sbjct: 309 EAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYS 368

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            L  G  ++G    A   +  M   G  PNV+ +T++I   C + ++ +A+++ +K+ + 
Sbjct: 369 SLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQ 428

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           GI  N+ TY  L+ G  +  +   A+++ Q +  KG      T  ++ +      L  EA
Sbjct: 429 GIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEA 488

Query: 435 KRVLKSAEEDRQSMPNKKDEIAVESI 460
             +L S  ED+  +P   D IA E+I
Sbjct: 489 LTLL-SKMEDKGCVP---DAIAYETI 510



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 208/425 (48%), Gaps = 3/425 (0%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           FN ++     P +I +  ++ +L + K +  ++ L  ++E  G++ + I  N +IN+   
Sbjct: 37  FNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCH 96

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-QLMSQDKNVKPND 135
              ++ A  +F K+   G +P   TY TLI+G    G+ +ESL    +L+SQ   +K + 
Sbjct: 97  LRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQ--GIKLDH 154

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            +Y  L+   C       A  ++ K+     +PD V YNT+     +      A  +  E
Sbjct: 155 VSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCE 214

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M   +V PN  T   ++ G+C  G ++ A   L  M    V+PN+  FN+L+ G      
Sbjct: 215 MFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGK 274

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
                  + +M + GV PDV T++ +MD +      GK + +F+ M + G+  D+H +S+
Sbjct: 275 MREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSV 334

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           +  G  +     +A  +   MR   V P+VV ++++I G C + ++  A+   ++M + G
Sbjct: 335 MISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRG 394

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
             PN+ TY +L+    ++ Q  +A  LL+ ++++G++    T  ++ D     G   +A+
Sbjct: 395 QPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQ 454

Query: 436 RVLKS 440
           +V + 
Sbjct: 455 KVFQD 459



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 202/403 (50%), Gaps = 1/403 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  E+    + L+ +G +   ++Y TL+  L +  +    L L+ K+E +  +PD
Sbjct: 129 LCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPD 188

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++N +I+   +   V +A  ++ +M +    P   TY +LI G+  VG+ +++  LL 
Sbjct: 189 VVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLN 248

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   KNV PN  T+N LV   C +  + EA ++V  M+  G+ PD  TYN L   Y   
Sbjct: 249 EMVL-KNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLV 307

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E  +A+ +   M    V  +  +  +++SG  K   +++AM     M+   V P++V +
Sbjct: 308 KEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAY 367

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           +SLI G       +   K +  M + G  P+V+T+++++DA   +  + K   +   +  
Sbjct: 368 SSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKD 427

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GI+ +++ ++IL  G  + G    A+ +   +   G + +VV ++ +I+G C       
Sbjct: 428 QGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDE 487

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
           A+++  KM + G  P+   YET++  + E     +AE+LL+ M
Sbjct: 488 ALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 148/307 (48%), Gaps = 13/307 (4%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA  +   +++EG  P + TY  L+      K      ++ + + + G+  D
Sbjct: 269 LCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCD 328

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              ++ MI+  S+   +DEAM +F+ M++    P    Y++LI G    G+   +LK + 
Sbjct: 329 VHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVD 388

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D+   PN  TY  L+ A C  + +++A  ++ K+   GIQ +  TYN L     + 
Sbjct: 389 EM-HDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKD 447

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A+++  ++       +  T  I+++G CKE   ++A+  L +M++    P+ + +
Sbjct: 448 GRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAY 507

Query: 244 NSLIKGFLDIKDSDGVDKALTLM------EEFGVKPD----VVTFSTIMDAWSSAGLMGK 293
            ++I  F +   +D  +K L  M      ++ G   D     +   +I+ +W+S+ ++G 
Sbjct: 508 ETIINAFFEKDMNDKAEKLLREMIDCVDYKDNGDTCDQYDEFICKRSILASWNSSYVVGG 567

Query: 294 CQEIFDD 300
            +  FDD
Sbjct: 568 WE--FDD 572



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 106/254 (41%), Gaps = 35/254 (13%)

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
           N+ DA+    RM  +   P ++ F  ++   +  K    V      ME  G++ + +T +
Sbjct: 29  NLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLN 88

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
            +++++     +     +F  ++K G +PDI  ++ L +G    G+ +++ +    +   
Sbjct: 89  ILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQ 148

Query: 340 GV-----------------------------------HPNVVMFTTVISGWCNAVKMQRA 364
           G+                                    P+VVM+ T+I G C    ++ A
Sbjct: 149 GIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDA 208

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             +Y +M E  + PN+ TY +L++G+    Q  +A  LL  M  K V P   T   + D 
Sbjct: 209 FDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDG 268

Query: 425 WRAIGLAREAKRVL 438
               G  REAK ++
Sbjct: 269 LCKEGKMREAKSLV 282



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 4/95 (4%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NILV      G+  +A  +F  L+ +GH   ++TY+ ++  L ++  F   L+L+SK+E 
Sbjct: 438 NILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMED 497

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKD 92
            G  PD+I +  +INA  E    D+A K+ ++M D
Sbjct: 498 KGCVPDAIAYETIINAFFEKDMNDKAEKLLREMID 532


>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
 gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
 gi|223948163|gb|ACN28165.1| unknown [Zea mays]
 gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
          Length = 786

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/530 (24%), Positives = 233/530 (43%), Gaps = 87/530 (16%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA   F  L   GH P ++TY  L+    +   +   L ++ ++E++G +PD++ +
Sbjct: 259 GLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTY 318

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +    + +G  +EA +    M   G  P   TYNT++  YGNVGK +E+L L   M +
Sbjct: 319 NELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKK 378

Query: 128 DKNVKPNDRTYNILV--------------------RAWCSKNSIEEAWN----------- 156
              V PN  TYN+++                    R+ C+ N +   WN           
Sbjct: 379 TGFV-PNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRV--TWNTMLAVCGKRGM 435

Query: 157 ------VVYKMVASGIQPDAVTYNTLARAYAQYGE---------------------TYR- 188
                 V+  M + G++    TYNTL  AY + G                      TY  
Sbjct: 436 EDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNA 495

Query: 189 -------------AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
                        A+ ++ +M+    +PNE++  +++  Y K GN+           E E
Sbjct: 496 LLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAI-----ENE 550

Query: 236 VH------PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
           V+      P+ V+  +L+      +  DG++ A   ++  G  PD+V F++++  ++  G
Sbjct: 551 VYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNG 610

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR-KYGVHPNVVMF 348
           +  K  E+FD + ++G+ PD+  ++ L   Y +  E  +AE IL  ++    + P+VV +
Sbjct: 611 MYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSY 670

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
            TVI+G+C    ++ A  +  +M   G+ P   TY TL+ GY   +    A E++  M +
Sbjct: 671 NTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQ 730

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVE 458
            G++P + T + V +S+       EA+  L    E       K  E  +E
Sbjct: 731 HGLKPMELTYRRVVESYCRAKRFEEARGFLSEVSETDLDFDKKALEAYIE 780



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 211/476 (44%), Gaps = 40/476 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDG 59
           ++ L   G+   A  +F  L  +G  PTL+TY  ++    R  R +  I++L+ ++   G
Sbjct: 181 LHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAG 240

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           ++PD    + +I AC   G VDEA+  F+ +K  G  P   TYN L++ +G  G   E+L
Sbjct: 241 VEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEAL 300

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           ++L  M Q+   +P+  TYN L   +      EEA   +  M + G+ P+A TYNT+  A
Sbjct: 301 RVLGEMEQN-GCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTA 359

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           Y   G+   A  +  +M+     PN  T  +++    K+      +  L  M      PN
Sbjct: 360 YGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPN 419

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            V +N+++         D V + L  M   GV+    T++T++ A+   G      ++++
Sbjct: 420 RVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYN 479

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN--------------- 344
           +M  AG  P I  ++ L     R G+   A+SI++ MR  G  PN               
Sbjct: 480 EMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGG 539

Query: 345 ----------------------VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
                                 V++ T VI+ +    ++    + ++++   G NP+L  
Sbjct: 540 NVAGIAAIENEVYGSGAVFPSWVILRTLVIANF-KCRRLDGMETAFQEVKARGYNPDLVI 598

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           + ++L  Y +     +A E+   ++  G+ P   T   + D +     + EA+++L
Sbjct: 599 FNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKIL 654



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/459 (23%), Positives = 200/459 (43%), Gaps = 40/459 (8%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P   T +T++AA  R       ++    ++  G  P  + +NA++    ++GN  EA
Sbjct: 240 GVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEA 299

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +++  +M+ +GC+P   TYN L   Y   G  EE+ + L  M+  K + PN  TYN ++ 
Sbjct: 300 LRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMAS-KGLLPNAFTYNTVMT 358

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           A+ +   ++EA  +  +M  +G  P+  TYN +     +        +ML EM  +   P
Sbjct: 359 AYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTP 418

Query: 204 NERTCGIIVSGYCKEGNMED-AMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           N  T   +++  C +  MED   R L  M+   V  +   +N+LI  +          K 
Sbjct: 419 NRVTWNTMLA-VCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKM 477

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              M   G  P + T++ +++  S  G     Q I   M   G +P+   +S+L + Y +
Sbjct: 478 YNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAK 537

Query: 323 AG------------------------------------EPQKAESILTSMRKYGVHPNVV 346
            G                                         E+    ++  G +P++V
Sbjct: 538 GGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLV 597

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL-QV 405
           +F +++S +       +A  +++ +   G++P+L TY +L+  Y +  + W AE++L Q+
Sbjct: 598 IFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQL 657

Query: 406 MEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
              + ++P   +   V + +   GL +EA+RVL     D
Sbjct: 658 KCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVAD 696



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 184/397 (46%), Gaps = 19/397 (4%)

Query: 35  LVAALTRQKRFKSILSLISKVE-KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS 93
           +V AL R+ +  ++ +L+ +     G + D   +  +++A S +G  + A+++F +++  
Sbjct: 144 VVRALGREGQHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQ 203

Query: 94  GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
           G  PT  TYN ++  YG +G+    +  L    +   V+P+  T + ++ A C    ++E
Sbjct: 204 GVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDE 263

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A      + A G  P  VTYN L + + + G    A ++L EM+ N  +P+  T   +  
Sbjct: 264 AVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAG 323

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---MEEFG 270
            Y + G  E+A R L  M    + PN   +N+++  + ++     VD+AL L   M++ G
Sbjct: 324 TYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGK---VDEALALFDQMKKTG 380

Query: 271 VKPDVVTFSTIMDAWSSAGLMGK------CQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
             P+V T++ ++      G++GK        E+  +M ++G  P+   ++ +     + G
Sbjct: 381 FVPNVNTYNLVL------GMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRG 434

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
                  +L  MR  GV  +   + T+I+ +        A  +Y +M   G  P + TY 
Sbjct: 435 MEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYN 494

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            LL           A+ ++  M  KG +P + +  L+
Sbjct: 495 ALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLL 531



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/363 (21%), Positives = 156/363 (42%), Gaps = 2/363 (0%)

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            +++ A   SG+ + A+ + +     G     S    +++  G  G+ +    LL     
Sbjct: 108 TSLLKALELSGHWEWALALLRWAGKEGAA-DASALEMVVRALGREGQHDAVCALLDETPL 166

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
               + + R Y  ++ A       E A  +  ++   G+ P  VTYN +   Y + G ++
Sbjct: 167 PPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSW 226

Query: 188 -RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            R   +L EM+   V P+  T   +++  C++G +++A+ F   +K     P +V +N+L
Sbjct: 227 PRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNAL 286

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           ++ F    +     + L  ME+ G +PD VT++ +   ++ AG   +     D M   G+
Sbjct: 287 LQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGL 346

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+   ++ +   Y   G+  +A ++   M+K G  PNV  +  V+       +    + 
Sbjct: 347 LPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLE 406

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           +  +M   G  PN  T+ T+L   G+         +L+ M   GV   + T   +  ++ 
Sbjct: 407 MLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYG 466

Query: 427 AIG 429
             G
Sbjct: 467 RCG 469



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 5/186 (2%)

Query: 260 DKALTLMEEFGVKP----DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
           D    L++E  + P    DV  ++T++ A S AG   +  E+F ++ + G+ P +  +++
Sbjct: 155 DAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNV 214

Query: 316 LAKGYVRAGEP-QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
           +   Y R G    +  ++L  MR  GV P+    +TVI+  C    +  A++ +E +   
Sbjct: 215 VLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKAR 274

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G  P + TY  LL  +G+A     A  +L  ME+ G +P   T   +A ++   G   EA
Sbjct: 275 GHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEA 334

Query: 435 KRVLKS 440
            R L +
Sbjct: 335 ARCLDT 340


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 209/447 (46%), Gaps = 35/447 (7%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  EA  +F  + E+G     +TY+ L+ +  R+ +  + +  + K+   G+
Sbjct: 373 INSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGI 432

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K     +N++IN   + GN+  A+  F +M D G KPT  +Y +LI GY N GK  E+ +
Sbjct: 433 KITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFR 492

Query: 121 LLQLMS----------------------------------QDKNVKPNDRTYNILVRAWC 146
           L   M+                                   ++N+ PN+ TYN+++   C
Sbjct: 493 LYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHC 552

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            + +  +A+ ++ +MV  G+ PD  TY  L  +    G    A++ + ++     + NE 
Sbjct: 553 KEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEM 612

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               ++ GYCKEG + DA+     M +  V  +LV +  LI G +  +D+  V   L  M
Sbjct: 613 CYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNM 672

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            +  ++PD V +++++D +S AG + K   I+D M+  G  P+I  ++ L     +AG  
Sbjct: 673 HDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLM 732

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            KAE +   M      PN V +   +        M++A+ ++  M + G+  N  +Y  L
Sbjct: 733 DKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNIL 791

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRP 413
           + G+ +  +   A +LL  M +  + P
Sbjct: 792 VRGFCKLGRVEEATKLLDEMIDNAIFP 818



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 201/428 (46%), Gaps = 6/428 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KGK  +A  + N + + G  P+L  Y  L+ +L +  +F     L  ++ + G+  + + 
Sbjct: 344 KGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVT 403

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +I++    G +D A+    KM  +G K T   YN+LI G+  +G    ++     M 
Sbjct: 404 YSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMI 463

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            DK +KP   +Y  L+  +C+K  + EA+ + ++M   GI P+  T+ TL  A  +    
Sbjct: 464 -DKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRM 522

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++  EM    + PNE T  +++ G+CKEGN   A   L +M +  + P+   +  L
Sbjct: 523 TDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPL 582

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I             K +  +     K + + +S ++  +   G +     +  +MVK G+
Sbjct: 583 ISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGV 642

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           + D+  +++L  G ++  +      +L +M    + P+ V++T++I G+  A  +++A  
Sbjct: 643 DMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFG 702

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           I++ M + G  PN+ TY TL+    +A    +AE L + M      P   T     D   
Sbjct: 703 IWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDH-- 760

Query: 427 AIGLAREA 434
              LARE 
Sbjct: 761 ---LAREG 765



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/423 (23%), Positives = 199/423 (47%), Gaps = 1/423 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  I N LI++G   + +TY TLV  L + + F+    ++ ++ + G  P     ++++
Sbjct: 279 EAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLV 338

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                 G V +A  +  ++K  G  P+   YN LI      GK +E+  L + M + K +
Sbjct: 339 EGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGE-KGL 397

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
             ND TY+IL+ ++C +  ++ A + + KM+ +GI+     YN+L   + + G    A  
Sbjct: 398 CANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVS 457

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
              EM +  ++P   +   ++SGYC +G + +A R  + M    + PN   F +LI    
Sbjct: 458 FFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALF 517

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                    +    M E  + P+ VT++ +++     G   K  E+ + MV+ G+ PD +
Sbjct: 518 RANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTY 577

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            +  L       G   +A+  +  + +     N + ++ ++ G+C   +++ A+ +  +M
Sbjct: 578 TYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREM 637

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
            + G++ +L  Y  L+ G  + +       LL+ M ++ +RP K     + D +   G  
Sbjct: 638 VKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSV 697

Query: 432 REA 434
           ++A
Sbjct: 698 KKA 700



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 191/420 (45%), Gaps = 13/420 (3%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGHRPTLIT---YTTLVAALTRQKR-FKSILSLISKVEKD 58
           +L G   P E   +F  L++   +   I+   +  L+ +  ++KR F S+L +   + + 
Sbjct: 132 LLRGGLDPRE---VFEALLDCFEKCDFISSLGFDLLIQSYVQEKRMFDSVL-IFRLMRQC 187

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
            + P       ++N  ++   VD  + +F ++   G +P    Y  +I+ +  +    ++
Sbjct: 188 ELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKA 247

Query: 119 LKLLQLM-SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
            +++Q M S D NV      YN+L+   C    + EA  +   ++  G+    VTY TL 
Sbjct: 248 KEMIQRMESSDLNVV----VYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLV 303

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               +  E      ++ EM      P E     +V G  ++G + DA   + R+K++   
Sbjct: 304 LGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAM 363

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P+L V+N+LI         D  +     M E G+  + VT+S ++D++   G +      
Sbjct: 364 PSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHF 423

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
              M+ AGI+  ++ ++ L  G+ + G    A S    M   G+ P VV +T++ISG+CN
Sbjct: 424 LGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCN 483

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             K+  A  +Y +M   GI PN  T+ TL+     A +   A  L   M E+ + P + T
Sbjct: 484 KGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVT 543



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/419 (23%), Positives = 188/419 (44%), Gaps = 3/419 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P + T   ++  L + +R   +L L  ++   G++PD  ++ A+I +  E  N  +A ++
Sbjct: 191 PQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEM 250

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            Q+M+ S        YN LI G     +  E++++   + Q K +  ++ TY  LV   C
Sbjct: 251 IQRMESS--DLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQ-KGLTASEVTYCTLVLGLC 307

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                E    V+ +M+  G  P     ++L     + G+   A  ++  ++     P+  
Sbjct: 308 KVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLF 367

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               +++  CK+G  ++A      M E  +  N V ++ LI  F      D     L  M
Sbjct: 368 VYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKM 427

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              G+K  V  ++++++     G +      FD+M+  G++P +  ++ L  GY   G+ 
Sbjct: 428 IMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKL 487

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +A  +   M   G+ PN   FTT+IS    A +M  A  ++++M E  + PN  TY  +
Sbjct: 488 HEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVM 547

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
           + G+ +     +A ELL  M +KG+ P   T + +  S  + G   EAK+ +     + 
Sbjct: 548 IEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREH 606



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/453 (20%), Positives = 199/453 (43%), Gaps = 3/453 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  ++  G RP +  Y  ++ +    K F     +I ++E   +  + +++N +I+   
Sbjct: 215 LFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLC 272

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           ++  V EA++I   +   G   +  TY TL+ G   V + E    ++  M +   V P +
Sbjct: 273 KNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFV-PTE 331

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
              + LV     K  + +A+++V ++   G  P    YN L  +  + G+   AE +  E
Sbjct: 332 AALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKE 391

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M    +  N+ T  I++  +C+ G ++ A+ FL +M    +   +  +NSLI G   + +
Sbjct: 392 MGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGN 451

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
                     M + G+KP VV++++++  + + G + +   ++ +M   GI P+ + F+ 
Sbjct: 452 LSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTT 511

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L     RA     A  +   M +  + PN V +  +I G C      +A  +  +M + G
Sbjct: 512 LISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKG 571

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           + P+  TY  L+       +   A++ +  +  +  +  +     +   +   G  R+A 
Sbjct: 572 LVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDAL 631

Query: 436 RVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSA 468
            V +   +    M      + ++   ++Q+ SA
Sbjct: 632 GVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSA 664



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/407 (24%), Positives = 169/407 (41%), Gaps = 70/407 (17%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KGK HEA  +++ +  +G  P   T+TTL++AL R  R      L  ++ +  M P+ + 
Sbjct: 484 KGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVT 543

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTY------------------------ 102
           +N MI    + GN  +A ++  +M   G  P T TY                        
Sbjct: 544 YNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLH 603

Query: 103 -----------NTLIKGYGNVGKPEESLKLLQLMSQ------------------------ 127
                      + L+ GY   G+  ++L + + M +                        
Sbjct: 604 REHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTS 663

Query: 128 ----------DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
                     D+ ++P+   Y  ++  +    S+++A+ +   M+  G  P+ VTY TL 
Sbjct: 664 AVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLI 723

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               + G   +AE +  EM  +   PN  T    +    +EG+ME A++    M +  + 
Sbjct: 724 NELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLL 782

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
            N V +N L++GF  +   +   K L  M +  + PD +T+STI+      G +    E 
Sbjct: 783 ANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEF 842

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           +D M+  G++PD   ++ L  G   AGE  KA  +   M + GV PN
Sbjct: 843 WDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPN 889



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 148/319 (46%), Gaps = 2/319 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  EA    + L  E  +   + Y+ L+    ++ R +  L +  ++ K G+  D
Sbjct: 586 LCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMD 645

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +  +I+   +  +      + + M D   +P    Y ++I GY   G  +++  +  
Sbjct: 646 LVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWD 705

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           +M  D+   PN  TY  L+   C    +++A  +  +M+ S   P+ VTY       A+ 
Sbjct: 706 IMI-DEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLARE 764

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G   +A Q+  +M    +  N  +  I+V G+CK G +E+A + L  M +  + P+ + +
Sbjct: 765 GSMEKAVQLHNDMLKGLL-ANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITY 823

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           +++I       + DG  +    M   G+KPD + ++ ++     AG +GK  E+ DDM++
Sbjct: 824 STIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIR 883

Query: 304 AGIEPDIHVFSILAKGYVR 322
            G++P+      L+ G  R
Sbjct: 884 RGVKPNQATHKSLSHGASR 902



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/260 (18%), Positives = 110/260 (42%), Gaps = 2/260 (0%)

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
           +++  Y +E  M D++     M++ E+ P +     ++ G   I+  D V      +   
Sbjct: 163 LLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSM 222

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G++PD+  +  ++ ++       K +E+   M  + +  ++ V+++L  G  +     +A
Sbjct: 223 GIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRVWEA 280

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             I   + + G+  + V + T++ G C   + +    + ++M E+G  P      +L+ G
Sbjct: 281 VEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEG 340

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMP 449
                +   A +L+  +++ G  P       + +S    G   EA+ + K   E      
Sbjct: 341 LRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCAN 400

Query: 450 NKKDEIAVESIHRKQNLSAS 469
           +    I ++S  R+  L  +
Sbjct: 401 DVTYSILIDSFCRRGKLDTA 420


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/520 (25%), Positives = 247/520 (47%), Gaps = 27/520 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M++LV  G   +AH ++  + + G  P + ++T  + +  +  R  + L L++ +   G 
Sbjct: 118 MSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGC 177

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + + + +  ++    E     E  ++F KM  SG     ST+N L++     G  +E  K
Sbjct: 178 EMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEK 237

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  + + + V PN  TYN+ ++  C +  ++ A  +V  ++  G +PD +TYN L    
Sbjct: 238 LLDKVIK-RGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGL 296

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +   AE  L +M N  + P+  T   +++GYCK G ++ A R +         P+ 
Sbjct: 297 CKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             + SLI G     +++   +AL L  E    G+KP+V+ ++T++   S+ G++ +  ++
Sbjct: 357 FTYRSLIDGLCHEGETN---RALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQL 413

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            ++M + G+ P++  F+IL  G  + G    A+ ++  M   G  P++  F  +I G+  
Sbjct: 414 ANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 473

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            +KM+ A+ I + M + G++P++ TY +LL G  +  +     E  + M EKG  P   T
Sbjct: 474 QLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFT 533

Query: 418 IQLVADSW-------RAIGLAREAKRVLKSAEEDRQSMPNKKDEI-------AVESIHRK 463
             ++ +S         A+GL  E K   KS   D  +     D            ++ RK
Sbjct: 534 FNILLESLCRYRKLDEALGLLEEMKN--KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591

Query: 464 Q----NLSASNSTFLQIPGVVSSEHNGSSAAKIRSQIVLR 499
                 +S+S  T+  I    + + N + A K+  ++V R
Sbjct: 592 MEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 196/450 (43%), Gaps = 43/450 (9%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+   A  +  CLIE+G +P +ITY  L+  L +  +F+     + K+  +G++PD
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD 320

Query: 64  SILFN-----------------------------------AMINACSESGNVDEAMKIFQ 88
           S  +N                                   ++I+     G  + A+ +F 
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN 380

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
           +    G KP    YNTLIKG  N G   E+ +L   MS+ K + P  +T+NILV   C  
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE-KGLIPEVQTFNILVNGLCKM 439

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
             + +A  +V  M++ G  PD  T+N L   Y+   +   A ++L  M +N V P+  T 
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTY 499

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             +++G CK    ED M     M E    PNL  FN L++     +    +D+AL L+EE
Sbjct: 500 NSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK---LDEALGLLEE 556

Query: 269 F---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA-GIEPDIHVFSILAKGYVRAG 324
                V PD VTF T++D +   G +     +F  M +A  +      ++I+   +    
Sbjct: 557 MKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKL 616

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
               AE +   M    + P+   +  ++ G+C    +        +M E G  P+L T  
Sbjct: 617 NVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLG 676

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            ++       + + A  ++  M +KG+ P+
Sbjct: 677 RVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/461 (24%), Positives = 200/461 (43%), Gaps = 37/461 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L  KG   E   + + +I+ G  P L TY   +  L ++      + ++  + + G 
Sbjct: 223 LRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGP 282

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD I +N +I    ++    EA     KM + G +P + TYNTLI GY   G  + + +
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAER 342

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           ++     +  V P+  TY  L+   C +     A  +  + +  GI+P+ + YNTL +  
Sbjct: 343 IVGDAVFNGFV-PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           +  G    A Q+  EM    + P  +T  I+V+G CK G + DA   +  M      P++
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FN LI G+      +   + L +M + GV PDV T++++++            E +  
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV+ G  P++  F+IL +   R  +  +A  +L  M+   V+P+ V F T+I G+C    
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581

Query: 361 MQRAMSIYEKMCE-IGINPNLKTYETLLWGYGEAKQPWRAEELLQVM------------- 406
           +  A +++ KM E   ++ +  TY  ++  + E      AE+L Q M             
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641

Query: 407 ----------------------EEKGVRPKKSTIQLVADSW 425
                                  E G  P  +T+  V +  
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL 682



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 215/435 (49%), Gaps = 9/435 (2%)

Query: 10  PHEAHYIFNCLIEE-GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD--GMKPDSIL 66
           P +A  +FN + +E G + TL TY +++  L    +F+++  ++  + ++      + + 
Sbjct: 20  PMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVY 79

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
             AM N     G V EA+ +F++M    C+PT  +YN ++    + G  +++ K+   M 
Sbjct: 80  VGAMKNY-GRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM- 137

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +D+ + P+  ++ I ++++C  +    A  ++  M + G + + V Y T+   +  Y E 
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGF--YEEN 195

Query: 187 YRAE--QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           ++AE  ++  +M  + V     T   ++   CK+G++++  + L ++ +  V PNL  +N
Sbjct: 196 FKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYN 255

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
             I+G     + DG  + +  + E G KPDV+T++ ++          + +     MV  
Sbjct: 256 LFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE 315

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+EPD + ++ L  GY + G  Q AE I+      G  P+   + ++I G C+  +  RA
Sbjct: 316 GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRA 375

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           ++++ +    GI PN+  Y TL+ G         A +L   M EKG+ P+  T  ++ + 
Sbjct: 376 LALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNG 435

Query: 425 WRAIGLAREAKRVLK 439
              +G   +A  ++K
Sbjct: 436 LCKMGCVSDADGLVK 450



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 186/385 (48%), Gaps = 1/385 (0%)

Query: 41  RQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS 100
           R+ + +  +++  +++    +P    +NA+++   +SG  D+A K++ +M+D G  P   
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
           ++   +K +    +P  +L+LL  MS  +  + N   Y  +V  +  +N   E + +  K
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSS-QGCEMNVVAYCTVVGGFYEENFKAEGYELFGK 206

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           M+ASG+     T+N L R   + G+    E++L ++    V PN  T  + + G C+ G 
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE 266

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           ++ A+R +  + E    P+++ +N+LI G          +  L  M   G++PD  T++T
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++  +   G++   + I  D V  G  PD   +  L  G    GE  +A ++       G
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG 386

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
           + PNV+++ T+I G  N   +  A  +  +M E G+ P ++T+  L+ G  +      A+
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSW 425
            L++VM  KG  P   T  ++   +
Sbjct: 447 GLVKVMISKGYFPDIFTFNILIHGY 471



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 110/233 (47%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K   A  I + +++ G  P + TY +L+  L +  +F+ ++     + + G  P+   FN
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            ++ +      +DEA+ + ++MK+    P   T+ TLI G+   G  + +  L + M + 
Sbjct: 536 ILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEA 595

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
             V  +  TYNI++ A+  K ++  A  +  +MV   + PD  TY  +   + + G    
Sbjct: 596 YKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNL 655

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
             + L EM  N   P+  T G +++  C E  + +A   ++RM +  + P  V
Sbjct: 656 GYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/361 (21%), Positives = 154/361 (42%), Gaps = 36/361 (9%)

Query: 82  EAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           +A+++F  M K+ G K T STY ++I+  G  GK E   ++L  M ++      +  Y  
Sbjct: 22  KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
            ++ +  K  ++EA NV  +M     +P   +YN +                        
Sbjct: 82  AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSV--------------------- 120

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
                    ++ SGY      + A +   RM++  + P++  F   +K F          
Sbjct: 121 ---------LVDSGY-----FDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAAL 166

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           + L  M   G + +VV + T++  +       +  E+F  M+ +G+   +  F+ L +  
Sbjct: 167 RLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVL 226

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            + G+ ++ E +L  + K GV PN+  +   I G C   ++  A+ +   + E G  P++
Sbjct: 227 CKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDV 286

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            TY  L++G  +  +   AE  L  M  +G+ P   T   +   +   G+ + A+R++  
Sbjct: 287 ITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD 346

Query: 441 A 441
           A
Sbjct: 347 A 347


>gi|403366299|gb|EJY82949.1| hypothetical protein OXYTRI_19434 [Oxytricha trifallax]
          Length = 1420

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 213/405 (52%), Gaps = 20/405 (4%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           RP  I++ T++    ++K+ +    + + ++   +KP+ + +N++I+AC     ++ A +
Sbjct: 581 RPDEISFNTIIKGCAQEKKLQLAFEMFNLMKMQCLKPNDVTYNSLIDACVRCNRLNSAWQ 640

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGY-------GNVGKP---EESLKLLQLMSQ-DKNVKPN 134
           +  +M+ +   P   TY+TLIKG          +  P   E++  LL+ M Q +  VKP+
Sbjct: 641 LLSEMQQNNIVPDNFTYSTLIKGIRAENQSQNGISNPMDLEKAFALLEQMKQSNGGVKPD 700

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
           +  YN L+ A    + +  A  V  +M  S I+P +VTY  L +AY    +   A  +  
Sbjct: 701 EILYNCLIDACVRFHDVNRAVAVFQEMQFSNIKPSSVTYGILIKAYGSANQLDNAFFVFK 760

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           +M++N + PN  T G ++    K   +E AM     MK   V  N ++F +LIKGF    
Sbjct: 761 KMKDNCLIPNSVTYGCLIDACVKNNQIERAMEVFETMKRDGVQLNTIIFTTLIKGF---A 817

Query: 255 DSDGVDKALTLME----EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK--AGIEP 308
            S  +D+AL + +    +  +KP+ VTF++++D       + K  EIF++M +  +  +P
Sbjct: 818 KSFKLDQALEVYQIMKMDDKIKPNNVTFNSLIDCCIRCNSIKKAMEIFEEMKQPISHTKP 877

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D+  +S + KG+ R    Q+A  +L  M K  +  + V++ +++ G C A +++ A+ +Y
Sbjct: 878 DLITYSTMIKGFCREKNIQQALIMLNDMEKNNIMADEVLYNSLLDGCCKANEIEMALKVY 937

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           + M  + I P+  TY  L+  YG+ +   +A  +L+ M++ G+RP
Sbjct: 938 KNMEILKIKPSNVTYSILIKIYGKQRNLPKALGVLEEMKKDGIRP 982



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 222/457 (48%), Gaps = 22/457 (4%)

Query: 13   AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI- 71
            A  +FN +  +  +P  +TY +L+ A  R  R  S   L+S+++++ + PD+  ++ +I 
Sbjct: 603  AFEMFNLMKMQCLKPNDVTYNSLIDACVRCNRLNSAWQLLSEMQQNNIVPDNFTYSTLIK 662

Query: 72   ---------NACSESGNVDEAMKIFQKMKDS--GCKPTTSTYNTLIKGYGNVGKPEESLK 120
                     N  S   ++++A  + ++MK S  G KP    YN LI           ++ 
Sbjct: 663  GIRAENQSQNGISNPMDLEKAFALLEQMKQSNGGVKPDEILYNCLIDACVRFHDVNRAVA 722

Query: 121  LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            + Q M Q  N+KP+  TY IL++A+ S N ++ A+ V  KM  + + P++VTY  L  A 
Sbjct: 723  VFQEM-QFSNIKPSSVTYGILIKAYGSANQLDNAFFVFKKMKDNCLIPNSVTYGCLIDAC 781

Query: 181  AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMK-ELEVHPN 239
             +  +  RA ++   M+ + V+ N      ++ G+ K   ++ A+     MK + ++ PN
Sbjct: 782  VKNNQIERAMEVFETMKRDGVQLNTIIFTTLIKGFAKSFKLDQALEVYQIMKMDDKIKPN 841

Query: 240  LVVFNSLIKGFLDIKDSDGVDKALTLMEEF-----GVKPDVVTFSTIMDAWSSAGLMGKC 294
             V FNSLI   +     + + KA+ + EE        KPD++T+ST++  +     + + 
Sbjct: 842  NVTFNSLIDCCIRC---NSIKKAMEIFEEMKQPISHTKPDLITYSTMIKGFCREKNIQQA 898

Query: 295  QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
              + +DM K  I  D  +++ L  G  +A E + A  +  +M    + P+ V ++ +I  
Sbjct: 899  LIMLNDMEKNNIMADEVLYNSLLDGCCKANEIEMALKVYKNMEILKIKPSNVTYSILIKI 958

Query: 355  WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            +     + +A+ + E+M + GI P L  Y  LL    +++Q   AE+L   M  +G+R  
Sbjct: 959  YGKQRNLPKALGVLEEMKKDGIRPGLIVYTCLLQTCIKSRQLKTAEQLFHDMRIQGIRGD 1018

Query: 415  KSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
            + T Q + +             +LK A + +  +P++
Sbjct: 1019 QLTYQTMINGCLYSQKFDSILILLKDASDSKVQLPHE 1055



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/503 (22%), Positives = 230/503 (45%), Gaps = 58/503 (11%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  + + + E G +P  + Y +++   ++  +      L  ++  +G+ P +I FN++I
Sbjct: 384 QALNVLSIMKERGIKPDEVLYNSIIDGCSKNNQIAKAFLLYDEMLGEGVTPTTITFNSLI 443

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN- 130
           + C  SGN D+A ++ ++MK+   KP   TY+TL KG  +  + ++  K   L +Q +N 
Sbjct: 444 DCCVRSGNQDQAWRVLEQMKEKQVKPDNYTYSTLFKGIKSENQRQDLEKAFVLYNQLQNS 503

Query: 131 --VKPNDRTYNILVRAW--C-------------------------------------SKN 149
               P++  +N+L+ A   C                                     S +
Sbjct: 504 NDFTPDEILFNVLLDACINCKQLDRAVELFKQLKPQSQPQIQVSNTDDADNSLSLEDSPD 563

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
           S + A  VV       ++PD +++NT+ +  AQ  +   A +M   M+   ++PN+ T  
Sbjct: 564 SAKNAPAVVNSSNHHFMRPDEISFNTIIKGCAQEKKLQLAFEMFNLMKMQCLKPNDVTYN 623

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF-LDIKDSDGV------DKA 262
            ++    +   +  A + L  M++  + P+   +++LIKG   + +  +G+      +KA
Sbjct: 624 SLIDACVRCNRLNSAWQLLSEMQQNNIVPDNFTYSTLIKGIRAENQSQNGISNPMDLEKA 683

Query: 263 LTLMEEF-----GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
             L+E+      GVKPD + ++ ++DA      + +   +F +M  + I+P    + IL 
Sbjct: 684 FALLEQMKQSNGGVKPDEILYNCLIDACVRFHDVNRAVAVFQEMQFSNIKPSSVTYGILI 743

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
           K Y  A +   A  +   M+   + PN V +  +I       +++RAM ++E M   G+ 
Sbjct: 744 KAYGSANQLDNAFFVFKKMKDNCLIPNSVTYGCLIDACVKNNQIERAMEVFETMKRDGVQ 803

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVME-EKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            N   + TL+ G+ ++ +  +A E+ Q+M+ +  ++P   T   + D        ++A  
Sbjct: 804 LNTIIFTTLIKGFAKSFKLDQALEVYQIMKMDDKIKPNNVTFNSLIDCCIRCNSIKKAME 863

Query: 437 VLKSAEEDRQSMPNKKDEIAVES 459
           +    EE +Q + + K ++   S
Sbjct: 864 IF---EEMKQPISHTKPDLITYS 883



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/443 (24%), Positives = 215/443 (48%), Gaps = 35/443 (7%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
           ++T++ ++    R +R    L+++S +++ G+KPD +L+N++I+ CS++  + +A  ++ 
Sbjct: 366 MMTFSCMIKGYCRAQRLPQALNVLSIMKERGIKPDEVLYNSIIDGCSKNNQIAKAFLLYD 425

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
           +M   G  PTT T+N+LI      G  +++ ++L+ M ++K VKP++ TY+ L +   S+
Sbjct: 426 EMLGEGVTPTTITFNSLIDCCVRSGNQDQAWRVLEQM-KEKQVKPDNYTYSTLFKGIKSE 484

Query: 149 N---SIEEAWNVVYKMV--ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           N    +E+A+ V+Y  +  ++   PD + +N L  A     +  RA ++       Q++P
Sbjct: 485 NQRQDLEKAF-VLYNQLQNSNDFTPDEILFNVLLDACINCKQLDRAVELF-----KQLKP 538

Query: 204 NERTCGIIVSGYCKEGN---MED-------AMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
             +   I VS      N   +ED       A   +       + P+ + FN++IKG    
Sbjct: 539 QSQP-QIQVSNTDDADNSLSLEDSPDSAKNAPAVVNSSNHHFMRPDEISFNTIIKGCAQE 597

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
           K      +   LM+   +KP+ VT+++++DA      +    ++  +M +  I PD   +
Sbjct: 598 KKLQLAFEMFNLMKMQCLKPNDVTYNSLIDACVRCNRLNSAWQLLSEMQQNNIVPDNFTY 657

Query: 314 SILAKGYVRAGEPQ----------KAESILTSMRKY--GVHPNVVMFTTVISGWCNAVKM 361
           S L KG     + Q          KA ++L  M++   GV P+ +++  +I        +
Sbjct: 658 STLIKGIRAENQSQNGISNPMDLEKAFALLEQMKQSNGGVKPDEILYNCLIDACVRFHDV 717

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            RA++++++M    I P+  TY  L+  YG A Q   A  + + M++  + P   T   +
Sbjct: 718 NRAVAVFQEMQFSNIKPSSVTYGILIKAYGSANQLDNAFFVFKKMKDNCLIPNSVTYGCL 777

Query: 422 ADSWRAIGLAREAKRVLKSAEED 444
            D+         A  V ++ + D
Sbjct: 778 IDACVKNNQIERAMEVFETMKRD 800



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 113/467 (24%), Positives = 210/467 (44%), Gaps = 63/467 (13%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAAL----TRQKRFKSILSLISKVEKDGM 60
           V  G   +A  +   + E+  +P   TY+TL   +     RQ   K+ +        +  
Sbjct: 447 VRSGNQDQAWRVLEQMKEKQVKPDNYTYSTLFKGIKSENQRQDLEKAFVLYNQLQNSNDF 506

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMK-------------------------DSG- 94
            PD ILFN +++AC     +D A+++F+++K                         DS  
Sbjct: 507 TPDEILFNVLLDACINCKQLDRAVELFKQLKPQSQPQIQVSNTDDADNSLSLEDSPDSAK 566

Query: 95  -------------CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
                         +P   ++NT+IKG     K + + ++  LM   + +KPND TYN L
Sbjct: 567 NAPAVVNSSNHHFMRPDEISFNTIIKGCAQEKKLQLAFEMFNLMKM-QCLKPNDVTYNSL 625

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL-----ARAYAQYG-----ETYRAEQ 191
           + A    N +  AW ++ +M  + I PD  TY+TL     A   +Q G     +  +A  
Sbjct: 626 IDACVRCNRLNSAWQLLSEMQQNNIVPDNFTYSTLIKGIRAENQSQNGISNPMDLEKAFA 685

Query: 192 MLFEMQ--NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
           +L +M+  N  V+P+E     ++    +  ++  A+     M+   + P+ V +  LIK 
Sbjct: 686 LLEQMKQSNGGVKPDEILYNCLIDACVRFHDVNRAVAVFQEMQFSNIKPSSVTYGILIKA 745

Query: 250 FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
           +      D        M++  + P+ VT+  ++DA      + +  E+F+ M + G++ +
Sbjct: 746 YGSANQLDNAFFVFKKMKDNCLIPNSVTYGCLIDACVKNNQIERAMEVFETMKRDGVQLN 805

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMR-KYGVHPNVVMFTTVISGW--CNAVKMQRAMS 366
             +F+ L KG+ ++ +  +A  +   M+    + PN V F ++I     CN++K  +AM 
Sbjct: 806 TIIFTTLIKGFAKSFKLDQALEVYQIMKMDDKIKPNNVTFNSLIDCCIRCNSIK--KAME 863

Query: 367 IYEKMCE--IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I+E+M +      P+L TY T++ G+   K   +A  +L  ME+  +
Sbjct: 864 IFEEMKQPISHTKPDLITYSTMIKGFCREKNIQQALIMLNDMEKNNI 910



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 66/126 (52%), Gaps = 2/126 (1%)

Query: 26   RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
            +P+ +TY+ L+    +Q+     L ++ +++KDG++P  I++  ++  C +S  +  A +
Sbjct: 946  KPSNVTYSILIKIYGKQRNLPKALGVLEEMKKDGIRPGLIVYTCLLQTCIKSRQLKTAEQ 1005

Query: 86   IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL--VR 143
            +F  M+  G +    TY T+I G     K +  L LL+  S  K   P++ + NIL  + 
Sbjct: 1006 LFHDMRIQGIRGDQLTYQTMINGCLYSQKFDSILILLKDASDSKVQLPHELSQNILTELN 1065

Query: 144  AWCSKN 149
             W + N
Sbjct: 1066 KWNTDN 1071



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/291 (20%), Positives = 119/291 (40%), Gaps = 21/291 (7%)

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF--------NSLIKGFLDIKDSDG 258
           T  I V  Y +    + A+++ +++++     N   +        +SL+K  L  +    
Sbjct: 290 TLKIFVKYYSRLNQTQTALQYFHQLQQTSQAQNDPTYYQTVNQMLDSLLKAELFEEAEQI 349

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
            +K  TL ++     D++TFS ++  +  A  + +   +   M + GI+PD  +++ +  
Sbjct: 350 YNKVFTLSKDQPNCMDMMTFSCMIKGYCRAQRLPQALNVLSIMKERGIKPDEVLYNSIID 409

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           G  +  +  KA  +   M   GV P  + F ++I     +    +A  + E+M E  + P
Sbjct: 410 GCSKNNQIAKAFLLYDEMLGEGVTPTTITFNSLIDCCVRSGNQDQAWRVLEQMKEKQVKP 469

Query: 379 NLKTYETLLWGYGEAKQPWRAEELL----QVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           +  TY TL  G     Q    E+      Q+       P +    ++ D+          
Sbjct: 470 DNYTYSTLFKGIKSENQRQDLEKAFVLYNQLQNSNDFTPDEILFNVLLDA------CINC 523

Query: 435 KRVLKSAEEDRQSMPNKKDEIAVESIHRKQN---LSASNSTFLQIPGVVSS 482
           K++ ++ E  +Q  P  + +I V +     N   L  S  +    P VV+S
Sbjct: 524 KQLDRAVELFKQLKPQSQPQIQVSNTDDADNSLSLEDSPDSAKNAPAVVNS 574


>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Brachypodium distachyon]
          Length = 410

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 197/395 (49%), Gaps = 4/395 (1%)

Query: 33  TTLVAA--LTRQKRFKSILSLISKVEKDG-MKPDSILFNAMINACSESGNVDEAMKIFQK 89
           TT VA   L+     +S L+L+++  K G    D     A+++    SG+V EA ++F  
Sbjct: 4   TTAVAVRRLSAAGEVRSALALLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDV 63

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M   G  P   T+  LI GY   G+ E+ L L + M +   ++PN  TYNILV  WC   
Sbjct: 64  MPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKM-RIGGIEPNLYTYNILVGEWCRTG 122

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
             E A  +  +M A GI  + V+YNTL     +Y +   A Q+L  M+   +RP+  T  
Sbjct: 123 EFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFN 182

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
           ++V GY K G M +A+ F  +M+     P+ V +N+LI GF   +D    ++A + M+E 
Sbjct: 183 LLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKER 242

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G+ P  VT++ ++DA++    M K  E+F  M KAG+E D+  + +L       G  + A
Sbjct: 243 GLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDA 302

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             +  S+ + G+    V++  +I G+       +AM +  +M + G  PN  +Y   +  
Sbjct: 303 RKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRI 362

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
                +   AE L+  M   GV+  +S  Q++ ++
Sbjct: 363 LCNDGKCSEAEALIDDMVRAGVQTSESVRQVLLNA 397



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 168/380 (44%), Gaps = 36/380 (9%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA  +F+ +   G  P  +T+T L+       R +  L+L  K+   G++P+   +
Sbjct: 52  GDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTY 111

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++     +G  + A  +F++M   G      +YNTLI G     K +++ +LL+LM +
Sbjct: 112 NILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRR 171

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  ++P+  T+N+LV  +     +  A +   +M  +G QP AVTYN L   + +  +  
Sbjct: 172 E-GIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMI 230

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           RA +   +M+   + P + T  I++  + +E +M+ A                       
Sbjct: 231 RANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAF---------------------- 268

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
                        +    ME+ G++ DV T+  ++ A    G M   +++F  + + G++
Sbjct: 269 -------------EMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQ 315

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
               ++ +L  GY R G   KA  ++  MRK G  PN   +   I   CN  K   A ++
Sbjct: 316 VGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEAL 375

Query: 368 YEKMCEIGINPNLKTYETLL 387
            + M   G+  +    + LL
Sbjct: 376 IDDMVRAGVQTSESVRQVLL 395



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 142/319 (44%), Gaps = 1/319 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +   +F  +   G  P L TY  LV    R   F+    L  ++   G+  + + +
Sbjct: 87  GRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSY 146

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I        + +A ++ + M+  G +P+  T+N L+ GYG  GK   +L     M  
Sbjct: 147 NTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRM 206

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
               +P+  TYN L+  +C    +  A      M   G+ P  VTY  L  A+A+  +  
Sbjct: 207 -AGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMD 265

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A +M   M+   +  + RT G++V   C EGNM+DA +    + E  +    V+++ LI
Sbjct: 266 KAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLI 325

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G+     S    K +  M + G  P+  ++   +    + G   + + + DDMV+AG++
Sbjct: 326 YGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQ 385

Query: 308 PDIHVFSILAKGYVRAGEP 326
               V  +L     R G P
Sbjct: 386 TSESVRQVLLNAKARQGSP 404



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 113/221 (51%), Gaps = 6/221 (2%)

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
           C  +V GYC+ G++ +A R    M  L + PN V F +LI G+      +   K L L E
Sbjct: 41  CTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRRE---KGLALFE 97

Query: 268 EF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
           +    G++P++ T++ ++  W   G   + + +F++M   GI  ++  ++ L  G  R  
Sbjct: 98  KMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYR 157

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           + + A  +L  MR+ G+ P+VV F  ++ G+  A KM  A+    +M   G  P+  TY 
Sbjct: 158 KMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYN 217

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            L+ G+  A+   RA      M+E+G+ P K T  ++ D++
Sbjct: 218 ALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAF 258



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 137/311 (44%), Gaps = 7/311 (2%)

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASG-IQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           T  + VR   +   +  A  ++ +   +G    D      L   Y + G+   A+++   
Sbjct: 4   TTAVAVRRLSAAGEVRSALALLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDV 63

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M    + PNE T   ++ GY   G  E  +    +M+   + PNL  +N L+  +    +
Sbjct: 64  MPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGE 123

Query: 256 SDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
               ++A  L EE    G+  +VV+++T++        M    ++ + M + GI P +  
Sbjct: 124 ---FERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVT 180

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           F++L  GY +AG+   A      MR  G  P+ V +  +I+G+C A  M RA   +  M 
Sbjct: 181 FNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMK 240

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
           E G+ P   TY  L+  +       +A E+   ME+ G+     T  ++  +    G  +
Sbjct: 241 ERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMK 300

Query: 433 EAKRVLKSAEE 443
           +A+++ +S  E
Sbjct: 301 DARKLFQSIGE 311


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 203/414 (49%), Gaps = 2/414 (0%)

Query: 9   KPHEAHYIFNCLIEE-GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           +P EA  +   + E+ G  P+L T+  ++  L +  +  + +        +G   D   +
Sbjct: 109 EPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTY 168

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            A+++  +++  + +A+ + +K+  +GC PT +TYN L+ G   +G+ EE++ LL+ +  
Sbjct: 169 TAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV- 227

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D    P+  TY  L+     +    EA+ +  +M   G+  D V Y  L R   Q G+  
Sbjct: 228 DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIP 287

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A  +   M +    P+  T   ++ G CK G +  A+R    M+   + PN VV+++LI
Sbjct: 288 QASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 347

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G    +  D   + L  M++    PD +T++ ++D    +G +   +  FD+M++AG +
Sbjct: 348 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 407

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD++ ++IL  G+ +AG    A  +   M      PNVV + T+ISG C   ++ +A   
Sbjct: 408 PDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLY 467

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           ++ M E G  P+   Y +L+ G  ++ +      L   ME  GV   ++  +L+
Sbjct: 468 FQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLI 521



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 192/408 (47%), Gaps = 2/408 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK   A   F      G    + TYT +V  L + K+ +  ++L+ K+  +G  P 
Sbjct: 140 LCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPT 199

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +NA++N   + G ++EA+ + +K+ D+GC P   TY +LI G G   +  E+ KL +
Sbjct: 200 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 259

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M+  + +  +   Y  L+R       I +A +V   M + G  PD VT +T+     + 
Sbjct: 260 EMAL-RGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKA 318

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A ++   M+   + PNE     ++ G CK   M+ A+  L +MK+    P+ + +
Sbjct: 319 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 378

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N LI G     D +        M E G KPDV T++ ++  +  AG       +FDDM  
Sbjct: 379 NILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSS 438

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           +   P++  +  L  G  +  +  KA      M++ G  P+  ++++++ G C + K++ 
Sbjct: 439 SHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEG 498

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
              ++++M   G+  N +T   L++   +A +   A  L   + ++G+
Sbjct: 499 GCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM 545



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 175/362 (48%), Gaps = 5/362 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EA  +   +++ G  P ++TYT+L+  L ++KR      L  ++   G+
Sbjct: 207 LNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGL 266

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D++ + A+I    ++G + +A  +++ M   GC P   T +T+I G    G+   +++
Sbjct: 267 VLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVR 326

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M + + + PN+  Y+ L+   C    ++ A  ++ +M  +   PD +TYN L    
Sbjct: 327 IFKSM-EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGL 385

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A     EM     +P+  T  I+VSG+CK GN + A      M      PN+
Sbjct: 386 CKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNV 445

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG-LMGKCQEIFD 299
           V + +LI G    +           M+E G  PD   +S+++D    +G L G C  +FD
Sbjct: 446 VTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCM-LFD 504

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M ++G+  +    + L     +A    +A S+  ++RK G+ P+   + ++IS    + 
Sbjct: 505 EMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISTLIKSA 562

Query: 360 KM 361
           K+
Sbjct: 563 KV 564



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 161/362 (44%)

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           NA+++  + +    EA  + +    +   P   T+N LI GY    +PEE+  +++ M +
Sbjct: 63  NALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEE 122

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D  V P+ +T+N+++   C    +  A +       +G   D  TY  +    A+  +  
Sbjct: 123 DYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQ 182

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  ++ ++  N   P   T   +++G CK G +E+A+  L ++ +    P++V + SLI
Sbjct: 183 DAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 242

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G    K S    K    M   G+  D V ++ ++     AG + +   ++  M   G  
Sbjct: 243 DGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCV 302

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+   S +  G  +AG    A  I  SM   G+ PN V+++ +I G C A KM  A+ +
Sbjct: 303 PDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 362

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
             +M +    P+  TY  L+ G  ++     A      M E G +P   T  ++   +  
Sbjct: 363 LAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCK 422

Query: 428 IG 429
            G
Sbjct: 423 AG 424



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/382 (22%), Positives = 163/382 (42%), Gaps = 59/382 (15%)

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK-NVKPNDRT 137
           + D  +KIFQ +KD+                      + + +L Q +S  +   + +  T
Sbjct: 24  STDAVVKIFQCLKDA----------------------DLAWELFQCLSSPRFGFQHSVHT 61

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
            N L+  +       EA N++   +A+   PD  T+N L   Y    E   A  ++ EM+
Sbjct: 62  GNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREME 121

Query: 198 NNQ-VRPNERTCGIIVSGYCKEG-----------------------------------NM 221
            +  V P+ +T  +++ G CK G                                    +
Sbjct: 122 EDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKI 181

Query: 222 EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
           +DA+  + ++      P +  +N+L+ G   +   +     L  + + G  PDVVT++++
Sbjct: 182 QDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 241

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +D         +  ++F +M   G+  D   ++ L +G ++AG+  +A S+  +M   G 
Sbjct: 242 IDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGC 301

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
            P+VV  +T+I G C A ++  A+ I++ M   G+ PN   Y  L+ G  +A++   A E
Sbjct: 302 VPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 361

Query: 402 LLQVMEEKGVRPKKSTIQLVAD 423
           +L  M++    P   T  ++ D
Sbjct: 362 MLAQMKKAFCTPDTITYNILID 383



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 134/316 (42%), Gaps = 19/316 (6%)

Query: 146 CSKNSIEEAWNVVYKMVAS---GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
           C K++ + AW + ++ ++S   G Q    T N L   +A+      A  +L         
Sbjct: 34  CLKDA-DLAWEL-FQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFL 91

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKE-LEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           P+  T  ++++GYC     E+A   +  M+E   V P+L   N ++ G           K
Sbjct: 92  PDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCK------SGK 145

Query: 262 ALTLMEEF------GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            L  M+ F      G   D+ T++ I+D  +    +     + + +   G  P I  ++ 
Sbjct: 146 VLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNA 205

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  G  + G  ++A  +L  +   G  P+VV +T++I G     +   A  ++++M   G
Sbjct: 206 LLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRG 265

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           +  +   Y  L+ G  +A +  +A  + + M  +G  P   T+  + D     G    A 
Sbjct: 266 LVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAV 325

Query: 436 RVLKSAEEDRQSMPNK 451
           R+ KS E  R   PN+
Sbjct: 326 RIFKSMEA-RGLAPNE 340



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/199 (22%), Positives = 93/199 (46%), Gaps = 3/199 (1%)

Query: 244 NSLIKGFLDIKDSDGVDKALTLME--EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
           ++++K F  +KD+D   +    +    FG +  V T + ++D ++      +   +  + 
Sbjct: 26  DAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNE 85

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK-YGVHPNVVMFTTVISGWCNAVK 360
           +     PD+  +++L  GY  A EP++A +++  M + YGV P++     V+ G C + K
Sbjct: 86  LATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGK 145

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  AM  +E     G   ++ TY  ++    + K+   A  L++ +   G  P  +T   
Sbjct: 146 VLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNA 205

Query: 421 VADSWRAIGLAREAKRVLK 439
           + +    +G   EA  +L+
Sbjct: 206 LLNGLCKMGRLEEAIDLLR 224


>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
 gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
          Length = 550

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 211/443 (47%), Gaps = 15/443 (3%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKV-EKDGMKPDSILFNAMINACSESGNVDEAMK 85
           P+  +Y+ ++  L R  R +  L L  ++ ++ G  PD++ F+ +  +C+ +G +D A+ 
Sbjct: 109 PSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAAVT 168

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +  K    G +     YN L+      G+ ++++ L +   QD    P+  ++N++++  
Sbjct: 169 LLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGV 228

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV-RPN 204
           C   + ++A  +V +M   G  PD +T+N L     +  +  R   +L  +Q + V  PN
Sbjct: 229 CRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPN 288

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF---LDIKDSDGVDK 261
             T   ++SGYCK G MEDA+     M E    PN V +N LI G+   LD++ +  + +
Sbjct: 289 VVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYR 348

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            L L       PDVVTFS+++D +   G +     I+ +M +  I+P+++ FSI+     
Sbjct: 349 QLILRR---CPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLC 405

Query: 322 RAGEPQKAESILTSMR-KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
           +     +A   L  +  +  + P   ++  VI   C   +++ A  I   M E G +P+ 
Sbjct: 406 KQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDK 465

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL-- 438
            TY  L+ G+    +   A  L   M E G RP K T+          G+  E  +++  
Sbjct: 466 YTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKITVNSFISCVLKAGMPNEVDQIMLI 525

Query: 439 ----KSAEEDRQSMPNKKDEIAV 457
                SA +   S P+++ +I+V
Sbjct: 526 ASGHASASQKVPSHPSQRLDISV 548



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 157/335 (46%), Gaps = 8/335 (2%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM-KPDSILFNAMINACSESGNVDE 82
           G R     Y  L+  L  + R +  ++L     +DG+  PD   FN +I      GN  +
Sbjct: 177 GRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVGNFQK 236

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+++ ++M + GC P T T+N L+ G     +      LL+ + +D    PN  TY  ++
Sbjct: 237 ALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVI 296

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
             +C    +E+A +V   M+ SG +P+ VTYN L   Y +  +   A +M  ++   +  
Sbjct: 297 SGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCP 356

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+  T   ++ GYC+ G ++DAMR    M +  + PN+  F+ +I        S    +A
Sbjct: 357 PDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRS---AEA 413

Query: 263 LTLMEEFGVKPDVV----TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
           L  + E  ++ D+      ++ ++D     G + +   I  DM + G  PD + ++IL  
Sbjct: 414 LGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILII 473

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
           G+   G   +A ++   M + G  P+ +   + IS
Sbjct: 474 GHCMKGRIPEAITLFHKMVETGCRPDKITVNSFIS 508



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/378 (23%), Positives = 175/378 (46%), Gaps = 14/378 (3%)

Query: 83  AMKIFQKMKDS--GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           A++IF  +        P+  +Y+ +I      G+  ++LKL   M+      P+   ++ 
Sbjct: 93  ALRIFSALHSPPLSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSF 152

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE--MQN 198
           +  +  +   ++ A  ++ K    G + +   YN L       G    A   LFE  +Q+
Sbjct: 153 VAGSCTNAGLLDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVA-LFESWIQD 211

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
               P+  +  +++ G C+ GN + A+  + RM E    P+ +  N L+ G    K  + 
Sbjct: 212 GLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNR 271

Query: 259 VDKALTLMEEFGV-KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
               L  ++  GV  P+VVT+++++  +  AG M     +++DM+++G  P+   +++L 
Sbjct: 272 GHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLI 331

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            GY +A + + A  +   +      P+VV F+++I G+C   ++  AM I+++M +  I 
Sbjct: 332 NGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQ 391

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR----PKKSTIQLVADSWRAIGLARE 433
           PN+ T+  ++  +   KQ  R+ E L  + E  +R    P+      V D     G   E
Sbjct: 392 PNVYTFSIII--HSLCKQN-RSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEE 448

Query: 434 AKRVLKSAEEDRQSMPNK 451
           A  ++   EE +   P+K
Sbjct: 449 ANLIVTDMEE-KGCHPDK 465



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 142/316 (44%), Gaps = 38/316 (12%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM-KPDSILFNAMINACSESG 78
           + E G  P  IT+  LV  L R K+      L+ ++++DG+  P+ + + ++I+   ++G
Sbjct: 244 MTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAG 303

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
            +++A+ ++  M +SG +P T TYN LI GYG     E ++                R Y
Sbjct: 304 RMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAV----------------RMY 347

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
             L+   C                     PD VT+++L   Y + G+   A ++  EM  
Sbjct: 348 RQLILRRCP--------------------PDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQ 387

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMK-ELEVHPNLVVFNSLIKGFLDIKDSD 257
           + ++PN  T  II+   CK+    +A+ FL  +    ++ P   ++N +I         +
Sbjct: 388 HHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVE 447

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
             +  +T MEE G  PD  T++ ++      G + +   +F  MV+ G  PD    +   
Sbjct: 448 EANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKITVNSFI 507

Query: 318 KGYVRAGEPQKAESIL 333
              ++AG P + + I+
Sbjct: 508 SCVLKAGMPNEVDQIM 523



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 97/212 (45%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A  ++N ++E G RP  +TY  L+    +    +S + +  ++      PD + F
Sbjct: 303 GRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTF 362

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +++I+     G +D+AM+I+++M     +P   T++ +I       +  E+L  L+ ++ 
Sbjct: 363 SSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNM 422

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
             ++ P    YN ++   C    +EEA  +V  M   G  PD  TY  L   +   G   
Sbjct: 423 RADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIP 482

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEG 219
            A  +  +M     RP++ T    +S   K G
Sbjct: 483 EAITLFHKMVETGCRPDKITVNSFISCVLKAG 514



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++IL   G+  EA+ I   + E+G  P   TYT L+     + R    ++L  K+ + G 
Sbjct: 437 IDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGC 496

Query: 61  KPDSILFNAMINACSESG---NVDEAMKI 86
           +PD I  N+ I+   ++G    VD+ M I
Sbjct: 497 RPDKITVNSFISCVLKAGMPNEVDQIMLI 525


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 200/422 (47%), Gaps = 40/422 (9%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G+G+   A  + + ++     P ++TYT L+ A  ++  +K  + L+ ++   G  PD
Sbjct: 168 LCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPD 227

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N ++N   + G VD+A++  + +   GC+P T +YN ++KG     + E++ +L+ 
Sbjct: 228 IVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMG 287

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M Q K   PN  T+N+L+   C K  +E A  V+ ++   G  P++++YN L  A    
Sbjct: 288 EMGQ-KGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHA---- 342

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                                          +CK+  M+ AM FL  M     +P++V +
Sbjct: 343 -------------------------------FCKQKKMDKAMAFLDLMVSRGCYPDIVSY 371

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+L+       + D   + L  +++ G  P +++++T++D  + AG   +  E+ ++MV 
Sbjct: 372 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 431

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G++PDI  +S +A G  R    + A      ++  G+ PN V++  +I G C   +   
Sbjct: 432 KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS 491

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK----KSTIQ 419
           A+ ++  M   G  PN  TY  L+ G         A +LL  +  +GV  K    K  I+
Sbjct: 492 AIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLINKGAIR 551

Query: 420 LV 421
           L+
Sbjct: 552 LL 553



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 209/428 (48%), Gaps = 7/428 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P ++ Y  +VA      +  +   L++++    ++PD+  +N +I      G    A+ +
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAV 180

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M    C P   TY  L++        ++++KLL  M +DK   P+  TYN++V   C
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM-RDKGCTPDIVTYNVVVNGIC 239

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            +  +++A   +  + + G +P+ V+YN + +          AE+++ EM      PN  
Sbjct: 240 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 299

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T  +++S  C++G +E A+  L ++ +    PN + +N L+  F   K  D     L LM
Sbjct: 300 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 359

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              G  PD+V+++T++ A   +G +    E+   +   G  P +  ++ +  G  +AG+ 
Sbjct: 360 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 419

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           ++A  +L  M   G+ P+++ ++T+ +G C   +++ A+  + K+ ++GI PN   Y  +
Sbjct: 420 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 479

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK---SAEE 443
           + G  + ++   A +L   M   G  P +ST  ++ +     GL +EA+ +L    S   
Sbjct: 480 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV 539

Query: 444 DRQSMPNK 451
            R+S+ NK
Sbjct: 540 VRKSLINK 547



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 193/398 (48%), Gaps = 18/398 (4%)

Query: 38  ALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKP 97
           +L R+      L L+    +    PD+    A+I   S SG   EA ++      + C P
Sbjct: 74  SLVRRGELDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEARRVL-----AACGP 124

Query: 98  TTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
               YN ++ GY   G+ + + +L+  M     V+P+  TYN L+R  C +     A  V
Sbjct: 125 DVMAYNAMVAGYCGAGQLDAARRLVAEMP----VEPDAYTYNTLIRGLCGRGRTANALAV 180

Query: 158 VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
           + +M+     PD VTY  L  A  +     +A ++L EM++    P+  T  ++V+G C+
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
           EG ++DA+ FL  +      PN V +N ++KG    +  +  ++ +  M + G  P+VVT
Sbjct: 241 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 300

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           F+ ++      GL+    E+ + + K G  P+   ++ L   + +  +  KA + L  M 
Sbjct: 301 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 360

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
             G +P++V + T+++  C + ++  A+ +  ++ + G  P L +Y T++ G  +A +  
Sbjct: 361 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 420

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
            A ELL  M  KG++P      ++  S  A GL RE +
Sbjct: 421 EALELLNEMVSKGLQP-----DIITYSTIAAGLCREDR 453



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 74/322 (22%), Positives = 166/322 (51%), Gaps = 5/322 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  +G+  +A      L   G  P  ++Y  ++  L   +R++    L+ ++ + G 
Sbjct: 235 VNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGC 294

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + FN +I+     G V+ A+++ +++   GC P + +YN L+  +    K ++++ 
Sbjct: 295 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMA 354

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L LM   +   P+  +YN L+ A C    ++ A  +++++   G  P  ++YNT+    
Sbjct: 355 FLDLMVS-RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 413

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+T  A ++L EM +  ++P+  T   I +G C+E  +EDA+R   +++++ + PN 
Sbjct: 414 TKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 473

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V++N++I G    +++         M   G  P+  T++ +++  +  GL+ + +++ D+
Sbjct: 474 VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 533

Query: 301 MVKAGIEPDIHVFSILAKGYVR 322
           +   G+       S++ KG +R
Sbjct: 534 LCSRGVVRK----SLINKGAIR 551


>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
 gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
          Length = 482

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 188/364 (51%), Gaps = 4/364 (1%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           +++ +N +INA  ++  +DEA+++F +MK  GC P+TSTYNTLI G   V +  E+ +  
Sbjct: 100 NTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFY 159

Query: 123 Q-LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           + L+S       +  TYNILV  +C  + + EA  ++ ++VA G    +  YN +     
Sbjct: 160 ERLLSS--GAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLF 217

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           + G+ + AE     M+ + VRP E T  +++ G CK   +  A    +   E    P++V
Sbjct: 218 KKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVV 277

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
           + + L+ GF      D   +   LM   G  P+ V+ + +++    A  + + +E+F+++
Sbjct: 278 ICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEV 337

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           VK   +PD+  +S    G  RA    +A  +L  +   G  P+VVM+T +ISG C+  ++
Sbjct: 338 VKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRL 397

Query: 362 QRAMSIYE-KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
             A  ++E  M   G  PN  T   L+ G+G A +   A EL Q   E+GV+P   T   
Sbjct: 398 DEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSA 457

Query: 421 VADS 424
           +A++
Sbjct: 458 MANN 461



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 159/352 (45%), Gaps = 2/352 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N      +  EA  +F  +   G  P+  TY TL+  L R +R         ++   G 
Sbjct: 108 INAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGA 167

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
               I +N +++   ++  V EA+++  ++   G   T++ YN +I      GK  E+  
Sbjct: 168 GASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAEL 227

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M +D  V+P + T+ +L+   C  N +  A  + +  + SG  P  V  + L   +
Sbjct: 228 FFNRMEKD-GVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGF 286

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +YG    A ++   M N    PN+ +C I+++G CK   +  A      + + +  P++
Sbjct: 287 CKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDV 346

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD- 299
           V +++ + G       D   + L ++ + G  PDVV ++ ++    S G + + +++F+ 
Sbjct: 347 VTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEV 406

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
           DM  AG  P+    ++L  G+  AG   +A  +     + GV P+   F+ +
Sbjct: 407 DMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAM 458



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/421 (24%), Positives = 180/421 (42%), Gaps = 44/421 (10%)

Query: 68  NAMINAC-SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           NA I  C    G +DEA+++F  +   GC       + L++     G+ EE LK+++LM 
Sbjct: 2   NADIVLCLCHVGKLDEALELFHSLVSDGCGLPA---DLLVRELSKAGRAEECLKVVKLML 58

Query: 127 QDKNVKP----------------------------------NDRTYNILVRAWCSKNSIE 152
             + ++                                   N  +YNIL+ A+C    I+
Sbjct: 59  DRQQLRERHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRID 118

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           EA  +  +M A G  P   TYNTL     +      A+Q    + ++    +  T  I+V
Sbjct: 119 EAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILV 178

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVV---FNSLIKGFLDIKDSDGVDKALTLMEEF 269
            G+CK   + +A+  L    EL     +V    +N +I            +     ME+ 
Sbjct: 179 DGFCKADRVPEAVELL---NELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKD 235

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           GV+P  VTF+ ++D    A  + + +EIF   +++G  P + + S L  G+ + G   +A
Sbjct: 236 GVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEA 295

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             I   M   G  PN V    +I+G C A ++ +A  ++E++ +    P++ TY T + G
Sbjct: 296 WRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDG 355

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMP 449
              A +  +A ++L ++ +KG  P       +     ++G   EA++V +         P
Sbjct: 356 LCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAP 415

Query: 450 N 450
           N
Sbjct: 416 N 416



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 85/182 (46%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+     G   EA  IF  +   G  P  ++   L+  L + KR      +  +V K   
Sbjct: 283 MDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQA 342

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD + ++  ++    +  VD+A ++   + D G  P    Y  LI G  ++G+ +E+ K
Sbjct: 343 KPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARK 402

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + ++  +     PN+ T N+LV  +     ++EA  +  + V  G+QPD  T++ +A   
Sbjct: 403 VFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAMANNT 462

Query: 181 AQ 182
           A+
Sbjct: 463 AK 464


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 203/418 (48%), Gaps = 3/418 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L GKG+   A  +   +   G + +  TY  L+    +++ F+    L  ++   G 
Sbjct: 249 VNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGA 308

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + +N ++ +    G V +A +    M +    P   +YNTLI GY  +G   E+L 
Sbjct: 309 LPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALL 368

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   + + KN+ P+  TYN L+   C   +++ A  +   M+  G+ PD VT+  L R +
Sbjct: 369 LFSEL-RSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGF 427

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G    A+++  EM +  ++P+       + G  K GN   A      MK     P+L
Sbjct: 428 CQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDL 487

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +N LI G   + + D  ++ +  M   G+ PD VT+++I+ A   +GL+ K +E+F D
Sbjct: 488 ITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSD 547

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+K GI P +  +++L   Y   G    A+     M+  GV PNV+ +  +I G C    
Sbjct: 548 MLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENM 607

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR-AEELLQVMEEKGVRPKKST 417
           M  A +++ +M   G++PN  TY T+L       Q W+ A +L + M ++ ++P   T
Sbjct: 608 MDVAYNLFAEMESKGVSPNKYTY-TILINENSNLQYWQDALKLYKDMLDREIKPDSCT 664



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 212/435 (48%), Gaps = 2/435 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  ++  G  P +     ++  L  +     +  + S + K  ++P  + FN M+++  
Sbjct: 159 VFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRC 218

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G V  A+++   M+  GC P   +YN L+ G    G+ + + +L++ MS    +K + 
Sbjct: 219 KEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSM-LGLKVSA 277

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TYN L+R +C K   EEA ++  +M+  G  P  VTYNT+  +  + G    A + L  
Sbjct: 278 HTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDV 337

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M N  + P+  +   ++ GY + GN  +A+     ++   + P++V +N+LI G     +
Sbjct: 338 MVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGN 397

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D        M + G+ PDVVTF+ ++  +   G +   +E+FD+M+  G++PD   ++ 
Sbjct: 398 LDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTT 457

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
              G ++ G P KA  +   M+  G  P+++ +  +I+G C       A  + +KM   G
Sbjct: 458 RIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEG 517

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           I P+  TY +++  +  +    +AEE+   M +KG+ P   T  ++  S+   G    AK
Sbjct: 518 IVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAK 577

Query: 436 RVLKSAEEDRQSMPN 450
           +      +D+   PN
Sbjct: 578 KYFDEM-QDKGVSPN 591



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 118/485 (24%), Positives = 226/485 (46%), Gaps = 37/485 (7%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L  K   +E   +++ +I+   RPT++T+ T++ +  ++      + ++  +   G 
Sbjct: 179 LKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGC 238

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +N ++N  S  G  D A ++ ++M   G K +  TYN LI+G+      EE+  
Sbjct: 239 DPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEAND 298

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M   +   P   TYN ++ + C    + +A   +  MV   + PD V+YNTL   Y
Sbjct: 299 LRREM-LGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGY 357

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++ G    A  +  E+++  + P+  T   ++ G C+ GN++ A      M +  + P++
Sbjct: 358 SRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDV 417

Query: 241 VVFNSLIKGF------------LDIKDSDGV--------------------DKALTLMEE 268
           V F  L++GF             D   S G+                     KA  + EE
Sbjct: 418 VTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEE 477

Query: 269 F---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
               G  PD++T++ +++     G      E+   M   GI PD   ++ +   ++ +G 
Sbjct: 478 MKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGL 537

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            +KAE + + M K G+HP+VV +T +I  +    ++  A   +++M + G++PN+ TY  
Sbjct: 538 LRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNA 597

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
           L++G  +      A  L   ME KGV P K T  ++ +    +   ++A ++ K    DR
Sbjct: 598 LIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDM-LDR 656

Query: 446 QSMPN 450
           +  P+
Sbjct: 657 EIKPD 661



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 194/410 (47%), Gaps = 13/410 (3%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           L+    ++   +  L +  K+  +G+ PD    N ++    +   V+E  +++  M    
Sbjct: 143 LIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQ 202

Query: 95  CKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
            +PT  T+NT++      G VG+  E L ++++   D    PND +YN+LV     K   
Sbjct: 203 IRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCD----PNDVSYNVLVNGLSGKGEF 258

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           + A  ++ +M   G++  A TYN L R + +      A  +  EM      P   T   I
Sbjct: 259 DRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTI 318

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           +   C+ G + DA R+L  M   ++ P+LV +N+LI G+  + +     +AL L  E   
Sbjct: 319 MYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGN---FAEALLLFSELRS 375

Query: 272 K---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
           K   P VVT++T++D     G +   + + DDM+K G+ PD+  F+IL +G+ + G    
Sbjct: 376 KNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPM 435

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A+ +   M   G+ P+ + +TT I G        +A  + E+M   G  P+L TY  L+ 
Sbjct: 436 AKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLIN 495

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           G  +      A EL+Q M  +G+ P   T   +  +    GL R+A+ V 
Sbjct: 496 GLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVF 545



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 186/379 (49%), Gaps = 7/379 (1%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA+ +   ++  G  PT++TY T++ +L R  R       +  +  + + PD + +N +I
Sbjct: 295 EANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLI 354

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD--- 128
              S  GN  EA+ +F +++     P+  TYNTLI G    G    +L + + M  D   
Sbjct: 355 YGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTG----NLDIAKGMKDDMIK 410

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
             + P+  T+ ILVR +C   ++  A  +  +M++ G++PD + Y T      + G   +
Sbjct: 411 HGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSK 470

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  M  EM+     P+  T  ++++G CK GN +DA   + +M+   + P+ V + S+I 
Sbjct: 471 AFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIH 530

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
             L        ++  + M + G+ P VVT++ ++ +++  G +   ++ FD+M   G+ P
Sbjct: 531 AHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSP 590

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           ++  ++ L  G  +      A ++   M   GV PN   +T +I+   N    Q A+ +Y
Sbjct: 591 NVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLY 650

Query: 369 EKMCEIGINPNLKTYETLL 387
           + M +  I P+  T+  L+
Sbjct: 651 KDMLDREIKPDSCTHSALM 669



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 147/311 (47%), Gaps = 1/311 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA  +F+ L  +   P+++TY TL+    R         +   + K G+ PD + F
Sbjct: 361 GNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTF 420

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             ++    + GN+  A ++F +M   G KP    Y T I G   +G P ++  + + M  
Sbjct: 421 TILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKA 480

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +    P+  TYN+L+   C   + ++A  +V KM   GI PD VTY ++  A+   G   
Sbjct: 481 E-GFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLR 539

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +AE++  +M    + P+  T  +++  Y   G ++ A ++   M++  V PN++ +N+LI
Sbjct: 540 KAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALI 599

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G       D        ME  GV P+  T++ +++  S+        +++ DM+   I+
Sbjct: 600 YGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIK 659

Query: 308 PDIHVFSILAK 318
           PD    S L K
Sbjct: 660 PDSCTHSALMK 670



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 151/336 (44%), Gaps = 40/336 (11%)

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA------------------ 170
           +N + + +  ++L++ +  K  +E+   V YKMV +G+ PD                   
Sbjct: 131 RNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNE 190

Query: 171 -----------------VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
                            VT+NT+  +  + GE  RA ++L  M+     PN+ +  ++V+
Sbjct: 191 VEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVN 250

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
           G   +G  + A   + +M  L +  +   +N LI+GF   +  +  +     M   G  P
Sbjct: 251 GLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALP 310

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
            VVT++TIM +    G +   +   D MV   + PD+  ++ L  GY R G   +A  + 
Sbjct: 311 TVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLF 370

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
           + +R   + P+VV + T+I G C    +  A  + + M + G+ P++ T+  L+ G+ + 
Sbjct: 371 SELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQM 430

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
                A+EL   M  +G++P       +A + R +G
Sbjct: 431 GNLPMAKELFDEMLSRGLKP-----DCIAYTTRIVG 461



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 1/220 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G P +A  +   +  EG  P LITY  L+  L +   F     L+ K+  +G+ PD + +
Sbjct: 466 GNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTY 525

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            ++I+A   SG + +A ++F  M   G  P+  TY  LI  Y   G+ + + K    M Q
Sbjct: 526 TSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEM-Q 584

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           DK V PN  TYN L+   C +N ++ A+N+  +M + G+ P+  TY  L    +      
Sbjct: 585 DKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQ 644

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
            A ++  +M + +++P+  T   ++    K+  +   +R 
Sbjct: 645 DALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRL 684



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 62/118 (52%), Gaps = 3/118 (2%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+   A   F+ + ++G  P +ITY  L+  L ++       +L +++E  G+ P+   
Sbjct: 570 RGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYT 629

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           +  +IN  S      +A+K+++ M D   KP + T++ L+K   ++ K  + L +L+L
Sbjct: 630 YTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMK---HLSKDYKLLAVLRL 684


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 204/421 (48%), Gaps = 37/421 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +GK  +A  +   L+E G  P  + Y T+V    +       +  I ++E  G+
Sbjct: 249 LNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGL 308

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ I FN++I+   E   +D+A +  +KM   G  P+  TYN LI GYG +       +
Sbjct: 309 RPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQ 368

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+ M ++   KPN  +Y  L+   C    I EA  V+  MV  G+ P+A  YN L    
Sbjct: 369 ILEEMEENGE-KPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNML---- 423

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                                          + G C  G + +A+RF   M +  +   +
Sbjct: 424 -------------------------------IDGSCTVGKLREALRFFDEMSKNGIGATI 452

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +NSLIKG   +      ++   L+   G  PDV+T+++++  +S+AG   KC E+++ 
Sbjct: 453 VTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYET 512

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M K G++P I+ F  L  G  + G   K E++   M +  + P+ V++  +I  +     
Sbjct: 513 MKKLGLKPTINTFHPLISGCSKEGIKLK-ETLFNEMLQMNLSPDRVVYNAMIHCYQETGH 571

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +Q+A S+ ++M ++G+ P+ KTY +L+ G+ +  +    ++L+  M+ KG+ P+  T  L
Sbjct: 572 VQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSL 631

Query: 421 V 421
           +
Sbjct: 632 L 632



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 110/459 (23%), Positives = 202/459 (44%), Gaps = 37/459 (8%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +++ + +EG  P+      +V +L   K+F ++L L  ++   G +PD +++   + A  
Sbjct: 18  LYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAV 77

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G++  AM++F+ MK     P    YN LI G     +  ++ KL   MS  +N+ PN 
Sbjct: 78  KLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSV-RNLVPNR 136

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            T+N L+  +C    ++ A  +  +M    ++P  +T+N+L     +      A  ML E
Sbjct: 137 VTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNE 196

Query: 196 MQNNQVRP------------------------------------NERTCGIIVSGYCKEG 219
           ++ N   P                                    +  TC I+++G CKEG
Sbjct: 197 IKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEG 256

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
            +E A   L  + E  + P  V++N+++ G+  I D D     +  ME  G++P+ + F+
Sbjct: 257 KVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFN 316

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
           +++D +    ++ K +E    MV  GI P +  ++IL  GY R     +   IL  M + 
Sbjct: 317 SVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEEN 376

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
           G  PNV+ + ++I+  C   K+  A  +   M   G+ PN   Y  L+ G     +   A
Sbjct: 377 GEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREA 436

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
                 M + G+     T   +      +G  +EA+ + 
Sbjct: 437 LRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMF 475



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 203/404 (50%), Gaps = 2/404 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P +  Y  L+  L ++KR +    L  ++    + P+ + FN +I+   ++G VD A+ +
Sbjct: 99  PNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGL 158

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            ++MK    +P+  T+N+L+ G     + EE+  +L  +  +  V P+  TY+I+     
Sbjct: 159 RERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFV-PDGFTYSIIFDGLL 217

Query: 147 -SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
            S +    A ++  + +  G++ D  T + L     + G+  +AE++L  +  + + P E
Sbjct: 218 KSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGE 277

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
                IV+GYC+ G+M+ A+  + +M+   + PN + FNS+I  F +++  D  ++ +  
Sbjct: 278 VIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKK 337

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M   G+ P V T++ ++D +    +  +C +I ++M + G +P++  +  L     + G+
Sbjct: 338 MVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGK 397

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +AE +L  M   GV PN  ++  +I G C   K++ A+  +++M + GI   + TY +
Sbjct: 398 ILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNS 457

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           L+ G  +  +   AEE+  ++   G  P   T   +   +   G
Sbjct: 458 LIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAG 501



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 188/370 (50%), Gaps = 9/370 (2%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++ +G  P++ TY  L+    R   F     ++ ++E++G KP+ I + ++IN   + G 
Sbjct: 338 MVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGK 397

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           + EA  + + M   G  P  + YN LI G   VGK  E+L+    MS++  +     TYN
Sbjct: 398 ILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKN-GIGATIVTYN 456

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L++  C    ++EA  + + + ++G  PD +TYN+L   Y+  G + +  ++   M+  
Sbjct: 457 SLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKL 516

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            ++P   T   ++SG  KEG ++        M ++ + P+ VV+N++I  +   +++  V
Sbjct: 517 GLKPTINTFHPLISGCSKEG-IKLKETLFNEMLQMNLSPDRVVYNAMIHCY---QETGHV 572

Query: 260 DKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
            KA +L   M + GV+PD  T+++++      G + + +++ DDM   G+ P+   +S+L
Sbjct: 573 QKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLL 632

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
            +G+    +   A      M + G  PNV +   + +G     ++Q A SI  +M   G+
Sbjct: 633 IQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANGM 692

Query: 377 NPNLKTYETL 386
           + NL T E L
Sbjct: 693 D-NLDTNEDL 701



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 193/420 (45%), Gaps = 44/420 (10%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           L++  +  K    +  L   + ++G  P       ++ +  ES   D  + +F++M   G
Sbjct: 2   LLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLG 61

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
            +P    Y   +     +G  + +++L + M + K V PN   YN+L+   C +  I + 
Sbjct: 62  FRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRK-VVPNVFVYNVLIGGLCKEKRIRD- 119

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
                                             AE++  EM    + PN  T   ++ G
Sbjct: 120 ----------------------------------AEKLFGEMSVRNLVPNRVTFNTLIDG 145

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GV 271
           YCK G ++ A+    RMK+ +V P+++ FNSL+ G    +    +++A  ++ E    G 
Sbjct: 146 YCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARR---IEEARCMLNEIKCNGF 202

Query: 272 KPDVVTFSTIMDAW-SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
            PD  T+S I D    S    G   +++ + +  G++ D +  SIL  G  + G+ +KAE
Sbjct: 203 VPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAE 262

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +L S+ ++G+ P  V++ T+++G+C    M RA+   E+M   G+ PN   + +++  +
Sbjct: 263 EVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKF 322

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            E +   +AEE ++ M  KG+ P   T  ++ D +  + +     ++L+  EE+ +  PN
Sbjct: 323 CEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEK-PN 381



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 145/307 (47%), Gaps = 2/307 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  EA  +   ++  G  P    Y  L+       + +  L    ++ K+G+
Sbjct: 389 INCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGI 448

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
               + +N++I    + G + EA ++F  +  +G  P   TYN+LI GY N G  ++ L+
Sbjct: 449 GATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLE 508

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M +   +KP   T++ L+ + CSK  I+    +  +M+   + PD V YN +   Y
Sbjct: 509 LYETMKK-LGLKPTINTFHPLI-SGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCY 566

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G   +A  +  EM +  VRP+ +T   ++ G+ KEG + +    +  MK   + P  
Sbjct: 567 QETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEA 626

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             ++ LI+G  D+KD +G       M E G  P+V   + +       G + + Q I  +
Sbjct: 627 DTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSE 686

Query: 301 MVKAGIE 307
           M+  G++
Sbjct: 687 MIANGMD 693


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 199/402 (49%), Gaps = 4/402 (0%)

Query: 39  LTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPT 98
           L R  R +  L+L          P+   +  +I   S +G++D A+++ ++MK SG +  
Sbjct: 32  LCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGN 91

Query: 99  TSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVV 158
              + TL+KG  + G+  E+L+  + M++D    P+  TY  LV A C     +EA  ++
Sbjct: 92  AVVHTTLMKGLCDAGRVVEALEHFRAMAKD--CAPDVMTYTALVHALCKAGKFDEAQGML 149

Query: 159 YKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
            +MVA G  PD VT++TL     ++G   +A ++L ++    +  ++     I+   C +
Sbjct: 150 REMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNK 209

Query: 219 GN-MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
            N +E A + L  +      P +++FN +I GF   KD D   K L +M E G  P+V T
Sbjct: 210 YNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFT 269

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           F+ ++     A  +G+ Q++ + MV  G  P++  +S +  G  + G+   A  +   M 
Sbjct: 270 FTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLME 329

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
           +    PNVV    +I G C A +++ A  +Y +M E G  P++ TY +L+ G  ++ Q  
Sbjct: 330 RRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVD 389

Query: 398 RAEELLQVMEEKGVRPKKS-TIQLVADSWRAIGLAREAKRVL 438
            A +L Q + E GV    + T   +   + A+G   +A R+ 
Sbjct: 390 EAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIF 431



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 210/451 (46%), Gaps = 12/451 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   GK  EA  +   ++ +G  P  +T++TL+  L +    +    ++  V + GM
Sbjct: 133 VHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGM 192

Query: 61  KPDSILFNAMIN-ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
                 F  +I   C++  +V+ A K+   +   G  PT   +N +I G+      + + 
Sbjct: 193 GNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAY 252

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           KLL++M + K   PN  T+ IL+   C  N + EA  ++ KMV  G  P+ VTY+T+   
Sbjct: 253 KLLEVMIE-KGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVING 311

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G+   A ++   M+     PN  T  I++ G CK   +E+A +  +RM+E    P+
Sbjct: 312 LCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPD 371

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLME---EFGVK-PDVVTFSTIMDAWSSAGLMGKCQ 295
           ++ +NSLI G      S  VD+A  L +   E GV   + VT+ST+   +++ G M    
Sbjct: 372 IITYNSLIDGLC---KSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADAC 428

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
            IF  +V  G  PD+  ++ L   Y +     +   ++  M   G  P V   + V+ G 
Sbjct: 429 RIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGL 488

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR--- 412
                 +RA+ +++ M   G   +   Y  ++ G   A +  +A  +L+ + +K  R   
Sbjct: 489 FEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFN 548

Query: 413 PKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           P  S +  + +S   +G   +AK++L    E
Sbjct: 549 PSSSAVDALVESLCQVGKTDDAKQLLHKMSE 579



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 187/417 (44%), Gaps = 6/417 (1%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +   +I +G  PT++ +  ++    + K   S   L+  + + G  P+   F  +I 
Sbjct: 216 ASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILIT 275

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              ++  V EA ++ +KM   GC P   TY+T+I G    G+ +++ +L QLM + +N  
Sbjct: 276 GLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMER-RNCP 334

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           PN  T+NIL+   C    IEEA  + ++M  +G  PD +TYN+L     +  +   A Q+
Sbjct: 335 PNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQL 394

Query: 193 LFEMQNNQVR-PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
              +  + V   N  T   +  GY   G M DA R    + +    P+L  + SLI  + 
Sbjct: 395 FQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYC 454

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
               +  V + +  M   G  P V T S ++          +  ++FD M   G   D  
Sbjct: 455 KTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDAL 514

Query: 312 VFSILAKGYVRAGEPQKAESILTSM---RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           +++++ +G  RA +  KA ++L  +   R    +P+      ++   C   K   A  + 
Sbjct: 515 IYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLL 574

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            KM E G    + +Y  LL G    ++   A ++ + M   G  P+ ST+ +V  SW
Sbjct: 575 HKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVI-SW 630



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 93/416 (22%), Positives = 192/416 (46%), Gaps = 9/416 (2%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +   ++  G  P ++TY+T++  L +Q +      L   +E+    P+ +  N +I
Sbjct: 285 EAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILI 344

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   ++  ++EA +++ +M+++GC P   TYN+LI G     + +E+ +L Q + +    
Sbjct: 345 DGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVS 404

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
             N  TY+ L   + +   + +A  +   +V  G  PD  TY +L   Y +        +
Sbjct: 405 AANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVE 464

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           ++ EM +    P   T   ++ G  +  + E A++    M       + +++N +++G  
Sbjct: 465 LVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEG-- 522

Query: 252 DIKDSDGVDKALTLMEEFGVK------PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
            +  +   DKAL ++E+   K      P       ++++    G     +++   M + G
Sbjct: 523 -MARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERG 581

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
               +  ++ L  G  R     +A  +  +M   G  P +     VIS  C+A K+  A 
Sbjct: 582 FAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAY 641

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            + ++M ++G  P+++T  TL+ GY ++ +   A +LL+ M E G+ P  +T  L+
Sbjct: 642 ELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/390 (23%), Positives = 184/390 (47%), Gaps = 5/390 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  +A+ +F  +      P ++T+  L+  L + KR +    L  ++ + G 
Sbjct: 309 INGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGC 368

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS-TYNTLIKGYGNVGKPEESL 119
            PD I +N++I+   +S  VDEA ++FQ + +SG     + TY+TL  GY  +G+  ++ 
Sbjct: 369 APDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADAC 428

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           ++  ++  DK   P+  TY  L+  +C  +   E   +V +M + G  P   T + +   
Sbjct: 429 RIFSMLV-DKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGG 487

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM---KELEV 236
             +   T RA Q+   M       +     ++V G  +    + A+  L ++   ++ + 
Sbjct: 488 LFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKF 547

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           +P+    ++L++    +  +D   + L  M E G    V +++ ++   S      +  +
Sbjct: 548 NPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQ 607

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F+ MV AG  P+I   +++      A +   A  ++  M K G  P++    T+I G+C
Sbjct: 608 VFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYC 667

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            + +   A  + E+M E G+ PN  T++ L
Sbjct: 668 KSGRADLARKLLEEMTEAGLEPNDTTHDLL 697



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 173/370 (46%), Gaps = 3/370 (0%)

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           EA+ +F+      C P   TY  LI+G+ + G  + +++LL+ M +    + N   +  L
Sbjct: 40  EALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEM-KSSGFEGNAVVHTTL 98

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           ++  C    + EA    ++ +A    PD +TY  L  A  + G+   A+ ML EM     
Sbjct: 99  MKGLCDAGRVVEALEH-FRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGC 157

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS-DGVD 260
            P+  T   ++ G CK G+ E A R L  + +  +  +   F ++I+   +  +S +   
Sbjct: 158 APDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELAS 217

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           K L ++   G  P V+ F+ +++ +  A  +    ++ + M++ G  P++  F+IL  G 
Sbjct: 218 KVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGL 277

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            +A    +A+ +L  M   G  PNVV ++TVI+G C   ++  A  +++ M      PN+
Sbjct: 278 CKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNV 337

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            T+  L+ G  +AK+   A +L   M E G  P   T   + D         EA ++ ++
Sbjct: 338 VTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQT 397

Query: 441 AEEDRQSMPN 450
             E   S  N
Sbjct: 398 IPESGVSAAN 407



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 120/332 (36%), Gaps = 77/332 (23%)

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           + F+   ++V  N  +C   +   C+    ++A+            PN   +  LI+GF 
Sbjct: 9   LFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFS 68

Query: 252 DIKDSDGVDKALTLMEEF-------------------------------------GVKPD 274
              D   +D A+ L+EE                                         PD
Sbjct: 69  SAGD---LDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCAPD 125

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           V+T++ ++ A   AG   + Q +  +MV  G  PD   FS L  G  + G  ++A  +L 
Sbjct: 126 VMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLE 185

Query: 335 SM--------------------RKY----------------GVHPNVVMFTTVISGWCNA 358
            +                     KY                G  P V+MF  VI+G+C A
Sbjct: 186 DVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKA 245

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
             +  A  + E M E G  PN+ T+  L+ G  +A +   A++LL+ M   G  P   T 
Sbjct: 246 KDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTY 305

Query: 419 QLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
             V +     G   +A  + +  E  R   PN
Sbjct: 306 STVINGLCKQGQVDDAYELFQLMER-RNCPPN 336


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 210/410 (51%), Gaps = 6/410 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALT-RQKRFKSILSLISKVEKDGMKP 62
           L  +G+   A  I   ++  G       + ++VA L  R  R +S++ LIS++ K GMKP
Sbjct: 381 LCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKP 440

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           +  L  A      +     EA+ I+ KM + G     +T N LI G       + + ++L
Sbjct: 441 NDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVL 500

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           + M  +K ++ ++ TYNI+++  C  + IEEA  +   M+  G +PDA  +N++  AY  
Sbjct: 501 RTMV-NKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCD 559

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+   A  +L +M+   V+P+  + G I+ GYCK  +++ A  +L  +    + PN V+
Sbjct: 560 LGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVI 619

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +N+LI G+    +  G    L  ME  G++P  VT+ ++M     AGL+ + + +F+   
Sbjct: 620 YNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSR 679

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           K  IE  +  ++I+ +G  + G+  +A +    MR   + PN + +TT++  +C +   +
Sbjct: 680 KNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNE 739

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEA----KQPWRAEELLQVMEE 408
            A  ++++M   GI P+  +Y TL+ G+ +     K   +A E+  +M +
Sbjct: 740 EASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEISSIMTQ 789



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 116/483 (24%), Positives = 207/483 (42%), Gaps = 70/483 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   G+  EA  +   + E    P+++T+  L+  L R  RF  + +L+ ++E  G+
Sbjct: 273 MDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGI 332

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ ++ N +I+     G+  EA+++F +M     K T  TYN + +     G+ E + +
Sbjct: 333 TPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAER 392

Query: 121 LLQ---------------------------------LMSQ--DKNVKPNDRTYNILVRAW 145
           +L+                                 L+S+   + +KPND       +  
Sbjct: 393 ILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQL 452

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C     +EA  +  KM+  G+  +  T N L     +      A ++L  M N  +  + 
Sbjct: 453 CQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDN 512

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T  I++ G CK+  +E+A++    M      P+  +FNS+I  + D+   +     L  
Sbjct: 513 ITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQ 572

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M+  GV+PDVV++ TI+D +  A  + K  E  ++++  G++P+  +++ L  GY R G 
Sbjct: 573 MKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGN 632

Query: 326 PQKAESILTSMRKYGVHPN-----------------------------------VVMFTT 350
              A  +L +M   G+ P                                    VV +T 
Sbjct: 633 ISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTI 692

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I G C   KM  AM+ +E+M    I PN  TY TL++ Y ++     A +L   M   G
Sbjct: 693 MIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSG 752

Query: 411 VRP 413
           + P
Sbjct: 753 IVP 755



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/438 (24%), Positives = 198/438 (45%), Gaps = 44/438 (10%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK-DGMKPDSILFNAMINACS 75
           F+ L      P++ T   L+ AL R     +   +  ++     + P+   + +MI A  
Sbjct: 181 FHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALC 240

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTST--YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP 133
           + G VD+  KI   +  +G + +     YN L+      G+ +E+++L   M + + V P
Sbjct: 241 KVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESR-VAP 299

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           +  T+ IL+      +   E   ++ +M   GI P+ V  N L   + + G    A ++ 
Sbjct: 300 SMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLF 359

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE--LEVHPNLVVFNSLIKGFL 251
            EM + +++    T  +I    CKEG ME A R L  M    + +H  L  FNS++ G L
Sbjct: 360 DEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGL--FNSVVAGLL 417

Query: 252 DIKDS-DGVDKALTLMEEFGVKPD--VVTFST-------------------------IMD 283
                 + V + ++ M + G+KP+  ++T  T                         I  
Sbjct: 418 QRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINI 477

Query: 284 AWSSAGLMGKCQ--------EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           A S+A + G C+        E+   MV  G+E D   ++I+ +G  +  + ++A  +   
Sbjct: 478 ATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDD 537

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M + G  P+  MF ++I  +C+  KM+ A+ +  +M   G+ P++ +Y T++ GY +AK 
Sbjct: 538 MIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKD 597

Query: 396 PWRAEELLQVMEEKGVRP 413
             +A E L  +   G++P
Sbjct: 598 IQKANEYLNELMACGLKP 615



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 163/358 (45%), Gaps = 22/358 (6%)

Query: 68  NAMINAC---SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           + +IN C   S  G++  A+  F  +      P+  T N L++     G    + K+   
Sbjct: 159 DLLINTCVTSSARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDE 218

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ--PDAVTYNTLARAYAQ 182
           M   K V PN  +Y  +++A C    +++ + ++  ++ +G+Q    AV YN L  A  +
Sbjct: 219 MRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCK 278

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G    A ++   M+ ++V P+  T GI+++G  +     +    L  M+ L + PN V+
Sbjct: 279 SGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVI 338

Query: 243 FNSLI-----KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKC 294
            N LI     KG           +A+ L +E     +K   VT++ I  A    G M + 
Sbjct: 339 CNELIDWHCRKGHF--------TEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERA 390

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYV-RAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
           + I ++M+  G+     +F+ +  G + R G  +    +++ M K G+ PN  + T    
Sbjct: 391 ERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTK 450

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
             C   + Q A+ I+ KM E G+  N+ T   L+ G  E K    A E+L+ M  KG+
Sbjct: 451 QLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGM 508



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 86/376 (22%), Positives = 163/376 (43%), Gaps = 7/376 (1%)

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCK---PTTSTYNTLIKGYGNVGKPEESLKLL-Q 123
           NA++ A + +GN+    K+F +M+D  CK   P   +Y ++IK    VGK ++  K+L  
Sbjct: 197 NALLEALARTGNLGATCKVFDEMRD--CKTVTPNGYSYTSMIKALCKVGKVDDGFKILSD 254

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           L+            YN+L+ A C    ++EA  +  +M  S + P  VT+  L     + 
Sbjct: 255 LIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRS 314

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                   +L EM+   + PNE  C  ++  +C++G+  +A+R    M   E+    V +
Sbjct: 315 DRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTY 374

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW-SSAGLMGKCQEIFDDMV 302
           N + +      + +  ++ L  M   G+      F++++       G +     +  +MV
Sbjct: 375 NLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMV 434

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           K G++P+  + +   K   +    Q+A  I   M + G+  N+     +I G C    M+
Sbjct: 435 KRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMK 494

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A  +   M   G+  +  TY  ++ G  +  +   A +L   M  KG +P       + 
Sbjct: 495 GATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSII 554

Query: 423 DSWRAIGLAREAKRVL 438
            ++  +G   EA  +L
Sbjct: 555 HAYCDLGKMEEALHLL 570



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 14/128 (10%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
           ++ YT ++  L +  +    ++   ++    + P+ I +  ++ A  +SGN +EA K+F 
Sbjct: 687 VVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFD 746

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESL----KLLQLMSQDKNVKPNDRTYNILVR- 143
           +M  SG  P   +YNTL+ G+  V   ++++    ++  +M+Q      ND   N+LV  
Sbjct: 747 EMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEISSIMTQ------NDCLDNVLVNR 800

Query: 144 ---AWCSK 148
               WC K
Sbjct: 801 ITTPWCEK 808


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 210/424 (49%), Gaps = 2/424 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
            F+ L  +G +P  ++YT+++  L +  R      L +++E +   P +  +N MI    
Sbjct: 5   FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 64

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
            +G  ++A K+ +++++ GC P+  ++N+++   G   K +E+L L ++M +D   +PN 
Sbjct: 65  SAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD--AEPNS 122

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TYNI++   C    +EEA+ ++ +M  + + P+ +T N +     +  +   A ++   
Sbjct: 123 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 182

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
                  P+  T   ++ G  K+G +++A R   +M +   + N VV+ SLI+ F     
Sbjct: 183 ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGR 242

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            +   K    +   G KPD+   +T MD    AG + K + IF+D+   G  PD+  +SI
Sbjct: 243 KEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSI 302

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  G  +AG+ ++  +I  +M++ G   +   +  V+ G+C + K+ +A  I E+M E  
Sbjct: 303 LIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC 362

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           + P + TY  ++ G  +  +   A  L +  + KG+         + D +  +G   EA 
Sbjct: 363 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAY 422

Query: 436 RVLK 439
            +L+
Sbjct: 423 LILE 426



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/437 (23%), Positives = 203/437 (46%), Gaps = 7/437 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L   G+  EA+ I + +      P L+T   +V  L + ++ +    +     + G 
Sbjct: 129 IDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGC 188

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + + ++I+   + G VDEA ++F+KM D+G       Y +LI+ +   G+ E+  K
Sbjct: 189 NPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHK 248

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + + + +  KP+    N  +        +E+   +   + + G  PD  +Y+ L    
Sbjct: 249 IFKELIR-RGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 307

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+      +   M+      + R    +V G+CK G +  A   L  MKE  V P +
Sbjct: 308 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 367

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             + +++ G   I   D +D+A  L EE    G++ +VV +S+++D +   G + +   I
Sbjct: 368 ATYGAIVDGLAKI---DRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI 424

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            ++M+K G+ P+++ ++ L    V+A E  +A     SM++    PN   ++ +I+G C 
Sbjct: 425 LEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCR 484

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             K  +A   ++ M + G+ PN+ TY T++ G  +      A  L +  +  G  P  ++
Sbjct: 485 VQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAAS 544

Query: 418 IQLVADSWRAIGLAREA 434
              + +       A EA
Sbjct: 545 FNALIEGMSNANRAMEA 561



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 98/395 (24%), Positives = 201/395 (50%), Gaps = 8/395 (2%)

Query: 51  LISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG 110
              +++  G+KPD + + +MI    ++G + EA ++F +M+     P    YNT+I GYG
Sbjct: 5   FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 64

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
           + G+ E++ KLL+ + +++   P+  ++N ++     K  ++EA ++ ++++    +P++
Sbjct: 65  SAGRFEDAYKLLERL-RERGCIPSVVSFNSILTCLGKKRKVDEALSL-FEVMKKDAEPNS 122

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
            TYN +       G    A ++L EM++  + PN  T  I+V   CK   +E+A +    
Sbjct: 123 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 182

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSS 287
             +   +P+ V + SLI G   +     VD+A  L E+    G   + V +++++  +  
Sbjct: 183 ASQRGCNPDCVTYCSLIDG---LGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFI 239

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
            G      +IF ++++ G +PD+ + +       +AGE +K   I   +R YG  P+V  
Sbjct: 240 HGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRS 299

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           ++ +I G   A + +   +I+  M + G   + + Y  ++ G+ ++ +  +A E+L+ M+
Sbjct: 300 YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 359

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           EK V+P  +T   + D    I    EA  + + A+
Sbjct: 360 EKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 394



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 89/180 (49%), Gaps = 1/180 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA+ +F     +G    ++ Y++L+    +  R      ++ ++ K G+ P+   +N+++
Sbjct: 385 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 444

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +A  ++  ++EA+  FQ MK+  C P T TY+ LI G   V K  ++    Q M Q + +
Sbjct: 445 DALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDM-QKQGL 503

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PN  TY  ++       +I +A+++  +  A+G  PDA ++N L    +       A Q
Sbjct: 504 VPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 563


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/449 (22%), Positives = 217/449 (48%), Gaps = 39/449 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L  +G+  +A  + + ++  G +P ++TYT L+ A+ R   F+  ++++ ++   G 
Sbjct: 150 IRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGC 209

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +N +IN     G VD+A ++  ++   G +P T +Y TL+KG     + ++  +
Sbjct: 210 TPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEE 269

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV------------------ 162
           L   M  +KN  PN+ T+++L+R +C    +E A  V+ +M                   
Sbjct: 270 LFAEM-MEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSI 328

Query: 163 -----------------ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                            + G  PD ++Y T+ +   +      A+++L EM  N   PNE
Sbjct: 329 CKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNE 388

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T    +   C++G +E A+  + +M E      +V +N+L+ GF        +D AL L
Sbjct: 389 VTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFC---VQGHIDSALEL 445

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
                 KP+ +T++T++    +A  +    E+  +M++    P++  F++L   + + G 
Sbjct: 446 FRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGF 505

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            ++A  ++  M ++G  PN++ + T++ G       + A+ +   +   G++P++ T+ +
Sbjct: 506 LEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSS 565

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
           ++    +  +   A +L  V+++ G+RPK
Sbjct: 566 IIGILSKEDRIEEAVQLFHVVQDIGMRPK 594



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/468 (23%), Positives = 210/468 (44%), Gaps = 28/468 (5%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   TYT L+  L  + R    LSL+  + + G +P+ + +  ++ A   +   ++AM +
Sbjct: 141 PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAV 200

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M+  GC P   TYN +I G    G+ +++ +LL  +      +P+  +Y  L++  C
Sbjct: 201 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPS-YGFQPDTVSYTTLLKGLC 259

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           +    ++   +  +M+     P+ VT++ L R + + G   RA Q+L +M  +    N  
Sbjct: 260 ASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTT 319

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
            C I+++  CK+G ++DA + L  M     +P+ + + +++KG    +  D   + L  M
Sbjct: 320 LCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEM 379

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
                 P+ VTF+T +      GL+ +   + + M + G    +  ++ L  G+   G  
Sbjct: 380 VRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGH- 438

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
              +S L   R     PN + +TT+++G CNA ++  A  +  +M      PN+ T+  L
Sbjct: 439 --IDSALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVL 496

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
           +  + +      A EL++ M E G  P   T   + D     G+ ++             
Sbjct: 497 VSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLD-----GITKDC------------ 539

Query: 447 SMPNKKDEIAVESIHR--KQNLSASNSTFLQIPGVVSSEHNGSSAAKI 492
                  E A+E +H    + +S    TF  I G++S E     A ++
Sbjct: 540 -----SSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQL 582



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 203/460 (44%), Gaps = 55/460 (11%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  +G+  +A  + N L   G +P  ++YTTL+  L   KR+  +  L +++ +   
Sbjct: 220 INGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNC 279

Query: 61  KPDSILF-----------------------------------NAMINACSESGNVDEAMK 85
            P+ + F                                   N +IN+  + G VD+A K
Sbjct: 280 MPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFK 339

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +   M   GC P T +Y T++KG     + +++ +LL  M ++ N  PN+ T+N  +   
Sbjct: 340 LLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRN-NCPPNEVTFNTFICIL 398

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C K  IE+A  ++ +M   G     VTYN L   +   G    A ++   M     +PN 
Sbjct: 399 CQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNT 455

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI-----KGFLDIKDSDGVD 260
            T   +++G C    ++ A   +  M   +  PN+V FN L+     KGFL+        
Sbjct: 456 ITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLE-------- 507

Query: 261 KALTLME---EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
           +A+ L+E   E G  P+++T++T++D  +         E+   +V  G+ PD+  FS + 
Sbjct: 508 EAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSII 567

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
               +    ++A  +   ++  G+ P  V++  ++ G C   ++  A+  +  M   G  
Sbjct: 568 GILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCM 627

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           PN  TY  L+ G         A++LL V+  +GV  K  T
Sbjct: 628 PNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVLNKNLT 667



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 183/403 (45%), Gaps = 11/403 (2%)

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
           DG  PD  L   +I      G   +A ++ +  + SG       YNTL+ GY   G  + 
Sbjct: 70  DGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDA 129

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           + +L+  M     V P+  TY  L+R  C +  + +A +++  M+  G QP+ VTY  L 
Sbjct: 130 ARRLIGSMP----VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLL 185

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
            A  +     +A  +L EM+     PN  T  +I++G C+EG ++DA   L R+      
Sbjct: 186 EAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQ 245

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P+ V + +L+KG    K  D V++    M E    P+ VTF  ++  +   G++ +  ++
Sbjct: 246 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQV 305

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            + M + G   +  + +I+     + G    A  +L  M  YG +P+ + +TTV+ G C 
Sbjct: 306 LEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCR 365

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           A +   A  +  +M      PN  T+ T +    +     +A  L++ M E G      T
Sbjct: 366 AERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHG-----CT 420

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESI 460
           + +V  +    G   +    + SA E  +SMP K + I   ++
Sbjct: 421 VGVVTYNALVNGFCVQGH--IDSALELFRSMPCKPNTITYTTL 461


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 202/409 (49%), Gaps = 1/409 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P ++TY TLV  L + + F+  L ++ ++      P     ++++    + G ++EA+ 
Sbjct: 294 KPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALN 353

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           + +++ D G  P    YN LI       K  E+  L   M +   ++PND TY+IL+  +
Sbjct: 354 LVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK-IGLRPNDVTYSILIDMF 412

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C +  ++ A + + +MV +G++     YN+L   + ++G+   AE  + EM N ++ P  
Sbjct: 413 CRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTV 472

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   ++ GYC +G +  A+R  + M    + P++  F +L+ G           K    
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE 532

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M E+ VKP+ VT++ +++ +   G M K  E   +M + GI PD + +  L  G    G+
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ 592

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A+  +  + K     N + +T ++ G+C   K++ A+S+ ++M + G++ +L  Y  
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 652

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           L+ G  + K       LL+ M ++G++P       + D+    G  +EA
Sbjct: 653 LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA 701



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 198/423 (46%), Gaps = 6/423 (1%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +FN ++  G RP +  YT ++ +L   K       +I+ +E  G   + + +N +I+
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              +   V EA+ I + +     KP   TY TL+ G   V + E  L+++  M   +   
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLR-FS 329

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P++   + LV     +  IEEA N+V ++V  G+ P+   YN L  +  +  + + AE +
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
              M    +RPN+ T  I++  +C+ G ++ A+ FL  M +  +  ++  +NSLI G   
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
             D    +  +  M    ++P VVT++++M  + S G + K   ++ +M   GI P I+ 
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           F+ L  G  RAG  + A  +   M ++ V PN V +  +I G+C    M +A    ++M 
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
           E GI P+  +Y  L+ G     Q   A+  +      G+      +  +  +    G  R
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD-----GLHKGNCELNEICYTGLLHGFCR 624

Query: 433 EAK 435
           E K
Sbjct: 625 EGK 627



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 204/442 (46%), Gaps = 40/442 (9%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K HEA  +F+ + + G RP  +TY+ L+    R+ +  + LS + ++   G+K     +N
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441

Query: 69  AMINA------------------------------------CSESGNVDEAMKIFQKMKD 92
           ++IN                                     CS+ G +++A++++ +M  
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK-GKINKALRLYHEMTG 500

Query: 93  SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIE 152
            G  P+  T+ TL+ G    G   +++KL   M++  NVKPN  TYN+++  +C +  + 
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE-WNVKPNRVTYNVMIEGYCEEGDMS 559

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           +A+  + +M   GI PD  +Y  L       G+   A+  +  +       NE     ++
Sbjct: 560 KAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLL 619

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
            G+C+EG +E+A+     M +  V  +LV +  LI G L  KD       L  M + G+K
Sbjct: 620 HGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLK 679

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           PD V +++++DA S  G   +   I+D M+  G  P+   ++ +  G  +AG   +AE +
Sbjct: 680 PDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVL 739

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNA-VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
            + M+     PN V +   +       V MQ+A+ ++  + + G+  N  TY  L+ G+ 
Sbjct: 740 CSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFC 798

Query: 392 EAKQPWRAEELLQVMEEKGVRP 413
              +   A EL+  M   GV P
Sbjct: 799 RQGRIEEASELITRMIGDGVSP 820



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 193/417 (46%), Gaps = 1/417 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  EA  +   +++ G  P L  Y  L+ +L + ++F     L  ++ K G++P+ + 
Sbjct: 345 RGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVT 404

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +I+     G +D A+    +M D+G K +   YN+LI G+   G    +   +  M 
Sbjct: 405 YSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMI 464

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +K ++P   TY  L+  +CSK  I +A  + ++M   GI P   T+ TL     + G  
Sbjct: 465 -NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++  EM    V+PN  T  +++ GYC+EG+M  A  FL  M E  + P+   +  L
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G      +      +  + +   + + + ++ ++  +   G + +   +  +MV+ G+
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           + D+  + +L  G ++  + +    +L  M   G+ P+ V++T++I         + A  
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           I++ M   G  PN  TY  ++ G  +A     AE L   M+     P + T     D
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD 760



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/439 (23%), Positives = 202/439 (46%), Gaps = 8/439 (1%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDGMKPDSILF 67
           KP +   +     E+    +  ++  L+    R +R    +L     + K  + P+    
Sbjct: 136 KPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTL 195

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQL 124
           +A+++   +  +   AM++F  M   G +P    Y  +I+      ++ + +E +  ++ 
Sbjct: 196 SALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEA 255

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
              D N+ P    YN+L+   C K  + EA  +   +    ++PD VTY TL     +  
Sbjct: 256 TGCDVNIVP----YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ 311

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           E     +M+ EM   +  P+E     +V G  K G +E+A+  + R+ +  V PNL V+N
Sbjct: 312 EFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYN 371

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +LI      +     +     M + G++P+ VT+S ++D +   G +        +MV  
Sbjct: 372 ALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDT 431

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G++  ++ ++ L  G+ + G+   AE  +  M    + P VV +T+++ G+C+  K+ +A
Sbjct: 432 GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKA 491

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           + +Y +M   GI P++ T+ TLL G   A     A +L   M E  V+P + T  ++ + 
Sbjct: 492 LRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEG 551

Query: 425 WRAIGLAREAKRVLKSAEE 443
           +   G   +A   LK   E
Sbjct: 552 YCEEGDMSKAFEFLKEMTE 570



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/425 (24%), Positives = 197/425 (46%), Gaps = 2/425 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P+    ++LV  L ++ + +  L+L+ +V   G+ P+  ++NA+I++  +     EA  +
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F +M   G +P   TY+ LI  +   GK + +L  L  M  D  +K +   YN L+   C
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV-DTGLKLSVYPYNSLINGHC 448

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               I  A   + +M+   ++P  VTY +L   Y   G+  +A ++  EM    + P+  
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   ++SG  + G + DA++    M E  V PN V +N +I+G+ +  D     + L  M
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            E G+ PD  ++  ++      G   + +   D + K   E +   ++ L  G+ R G+ 
Sbjct: 569 TEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           ++A S+   M + GV  ++V +  +I G       +    + ++M + G+ P+   Y ++
Sbjct: 629 EEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSM 688

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
           +    +      A  +  +M  +G  P + T   V +     G   EA+ VL S  +   
Sbjct: 689 IDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE-VLCSKMQPVS 747

Query: 447 SMPNK 451
           S+PN+
Sbjct: 748 SVPNQ 752



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 117/267 (43%), Gaps = 34/267 (12%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  EA  +   +++ G    L+ Y  L+    + K  K    L+ ++   G+KPD ++
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVG------------K 114
           + +MI+A S++G+  EA  I+  M + GC P   TY  +I G    G            +
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744

Query: 115 PEESLK-------LLQLMSQD---------------KNVKPNDRTYNILVRAWCSKNSIE 152
           P  S+         L ++++                K +  N  TYN+L+R +C +  IE
Sbjct: 745 PVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIE 804

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           EA  ++ +M+  G+ PD +TY T+     +  +  +A ++   M    +RP+      ++
Sbjct: 805 EASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLI 864

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPN 239
            G C  G M  A      M    + PN
Sbjct: 865 HGCCVAGEMGKATELRNEMLRQGLIPN 891



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 84/203 (41%), Gaps = 36/203 (17%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTR----------------------QKRF 45
           G   EA  I++ +I EG  P  +TYT ++  L +                      Q  +
Sbjct: 696 GDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755

Query: 46  KSILSLISKVEKD-------------GMKPDSILFNAMINACSESGNVDEAMKIFQKMKD 92
              L +++K E D             G+  ++  +N +I      G ++EA ++  +M  
Sbjct: 756 GCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIG 815

Query: 93  SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIE 152
            G  P   TY T+I         +++++L   M++ K ++P+   YN L+   C    + 
Sbjct: 816 DGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE-KGIRPDRVAYNTLIHGCCVAGEMG 874

Query: 153 EAWNVVYKMVASGIQPDAVTYNT 175
           +A  +  +M+  G+ P+  T  T
Sbjct: 875 KATELRNEMLRQGLIPNNKTSRT 897



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 52/98 (53%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  EA  +   +I +G  P  ITYTT++  L R+   K  + L + + + G++PD + 
Sbjct: 800 QGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVA 859

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNT 104
           +N +I+ C  +G + +A ++  +M   G  P   T  T
Sbjct: 860 YNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 190/388 (48%), Gaps = 6/388 (1%)

Query: 47  SILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLI 106
           +++ +   + KDG+ P+   +N ++ A  ++  V  A K+  +M   GC P   TY T++
Sbjct: 142 AVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIV 201

Query: 107 KGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGI 166
                + + +E+ ++L  M       P   +YN +V A C +  ++E ++VV  MV  G+
Sbjct: 202 SVLCKLDRLDEATEVLAAM------PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGL 255

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR 226
           QP+ +TY T+  A+ + GE   A  +L  M      PN  T   +V G   +G + DA+ 
Sbjct: 256 QPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALD 315

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
               M      P+ V +N LI+G   + D  G    L  ME+ G  P+V T+ST++D +S
Sbjct: 316 MWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFS 375

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
            AG +G    I++DM ++G +P++ V++ +   + +     +A+S++  M      PN V
Sbjct: 376 KAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTV 435

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            F T+I   C+  ++ RA+ ++ +M   G  PN +TY  L+ G         A  ++  M
Sbjct: 436 TFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEM 495

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREA 434
           +  G+     T   V        ++REA
Sbjct: 496 QSHGIELSLVTYNTVVSGLCQTRMSREA 523



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 176/370 (47%), Gaps = 1/370 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G +P +ITYTT+V A  +    +   ++++++   G  P+ + F A++    + G 
Sbjct: 250 MVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGR 309

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V +A+ +++ M   G  P+T +YN LI+G  +VG  + +  +L  M Q     PN RTY+
Sbjct: 310 VHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQ-HGCFPNVRTYS 368

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+  +     +  A ++   M  SG +P+ V Y  +   + +     +A+ ++ +M   
Sbjct: 369 TLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLE 428

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              PN  T   ++   C    +  A+   + M+     PN   +N LI G     +    
Sbjct: 429 NCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDA 488

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
              +T M+  G++  +VT++T++       +  +       M+  GI+P+   FS +   
Sbjct: 489 LHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHA 548

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y + GE + A  +L +M     H N++++T +++  CN  K+  AM+   KM   GI PN
Sbjct: 549 YCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPN 608

Query: 380 LKTYETLLWG 389
             T+  L+ G
Sbjct: 609 TVTWNVLVRG 618



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/425 (22%), Positives = 189/425 (44%), Gaps = 6/425 (1%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +++ + ++G  P + TY  LV AL +  R  +   ++ ++ + G  PD + +  +++   
Sbjct: 146 VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLC 205

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           +   +DEA ++   M      P  ++YN ++       + +E   ++  M   + ++PN 
Sbjct: 206 KLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMV-GRGLQPNV 259

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY  +V A+C    +  A  ++ +MV +G  P+ VT+  L R     G  + A  M   
Sbjct: 260 ITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRW 319

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M      P+  +  I++ G C  G+++ A   L  M++    PN+  +++LI GF    D
Sbjct: 320 MVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGD 379

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
             G       M   G KP+VV ++ ++D +    +  + + + D M+     P+   F+ 
Sbjct: 380 LGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNT 439

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L +         +A  +   MR++G  PN   +  +I G         A+ +  +M   G
Sbjct: 440 LIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHG 499

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           I  +L TY T++ G  + +    A   +  M  +G++P   T   +  ++   G  R A 
Sbjct: 500 IELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAA 559

Query: 436 RVLKS 440
            +L +
Sbjct: 560 WMLGA 564



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/407 (23%), Positives = 187/407 (45%), Gaps = 8/407 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   +Y  +V AL R+ R + + S++S +   G++P+ I +  +++A  ++G +  A  I
Sbjct: 222 PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAI 281

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M  +GC P   T+  L++G  + G+  ++L + + M  +    P+  +YNIL+R  C
Sbjct: 282 LARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAE-GWAPSTVSYNILIRGLC 340

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           S   ++ A +++  M   G  P+  TY+TL   +++ G+   A  +  +M  +  +PN  
Sbjct: 341 SVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVV 400

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               +V  +CK+     A   + +M      PN V FN+LI+   D +    V +AL + 
Sbjct: 401 VYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRR---VGRALGVF 457

Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            E    G  P+  T++ ++      G  G    +  +M   GIE  +  ++ +  G  + 
Sbjct: 458 HEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQT 517

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
              ++A   +  M   G+ PN   F+ +I  +C   +++ A  +   M  +  + N+  Y
Sbjct: 518 RMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVY 577

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ-LVADSWRAIG 429
             L+       +   A   L  M  +G+ P   T   LV   +R +G
Sbjct: 578 TILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLG 624



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 146/319 (45%), Gaps = 1/319 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+ H+A  ++  ++ EG  P+ ++Y  L+  L      K   S+++ +E+ G  P+
Sbjct: 304 LFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPN 363

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              ++ +I+  S++G++  A+ I+  M  SGCKP    Y  ++  +       ++  L+ 
Sbjct: 364 VRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLID 423

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  + N  PN  T+N L+R+ C    +  A  V ++M   G  P+  TYN L     + 
Sbjct: 424 KMLLE-NCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFRE 482

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A  M+ EMQ++ +  +  T   +VSG C+     +AM F+ +M    + PN   F
Sbjct: 483 GNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTF 542

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           +++I  +    +       L  M       +++ ++ +M    +   +         M+ 
Sbjct: 543 SAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLY 602

Query: 304 AGIEPDIHVFSILAKGYVR 322
            GI P+   +++L +G  R
Sbjct: 603 EGIYPNTVTWNVLVRGVFR 621



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 5/269 (1%)

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C +N +     V   M   G+ P+  TYN L RA  Q      A +ML EM      P++
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   IVS  CK   +++A   L  M  +    N +V  +L + F        V   ++ 
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVL-ALCREF----RMQEVFSVVSD 249

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M   G++P+V+T++TI+DA+  AG +     I   MV  G  P++  F+ L +G    G 
Sbjct: 250 MVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGR 309

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
              A  +   M   G  P+ V +  +I G C+   ++ A SI   M + G  PN++TY T
Sbjct: 310 VHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYST 369

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
           L+ G+ +A     A  +   M   G +P 
Sbjct: 370 LIDGFSKAGDLGGAISIWNDMSRSGCKPN 398



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/311 (21%), Positives = 134/311 (43%), Gaps = 19/311 (6%)

Query: 216 CKEGNMEDAMRFLY-RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           C   NM  A+  +Y  M++  VHPN+  +N L++            K L  M   G  PD
Sbjct: 134 CCGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPD 193

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
            VT++TI+        + +  E+      A + P    ++ +     R    Q+  S+++
Sbjct: 194 DVTYATIVSVLCKLDRLDEATEVL-----AAMPPVAASYNAIVLALCREFRMQEVFSVVS 248

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            M   G+ PNV+ +TT++  +C A +++ A +I  +M   G  PN+ T+  L+ G  +  
Sbjct: 249 DMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDG 308

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKD- 453
           +   A ++ + M  +G  P   +  ++     ++G  + A  +L S E+     PN +  
Sbjct: 309 RVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQ-HGCFPNVRTY 367

Query: 454 EIAVESIHRKQNLSASNSTFLQIPGVVSSEHNGSSAAKIRSQIVLRSDTVWTATKSLFVN 513
              ++   +  +L  + S +           N  S +  +  +V+ ++ V    K L  N
Sbjct: 368 STLIDGFSKAGDLGGAISIW-----------NDMSRSGCKPNVVVYTNMVDVFCKKLMFN 416

Query: 514 TYGSGVQPMVV 524
              S +  M++
Sbjct: 417 QAKSLIDKMLL 427


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 211/455 (46%), Gaps = 40/455 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  +F+ +++ G  P  ITY T++    +    ++   L  ++  DG KP+ + +
Sbjct: 30  GKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTY 89

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +++    +G +DE   +  +M      P   TY+ L  G    G   ES  +L L ++
Sbjct: 90  NVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTG---ESRTMLSLFAE 146

Query: 128 D--KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
              K V     T +IL+   C    + +A  V+  +V +G+ P  V YNTL   Y Q  +
Sbjct: 147 SLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRD 206

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A  +  +M++  +RP+  T   +++G CK   +  A   +  M++  V P++  FN+
Sbjct: 207 LRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNT 266

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           LI  +      +     L+ M++ G+K DV++F +++ A+   G + +   I DDM+   
Sbjct: 267 LIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKD 326

Query: 306 IEPDIHV-----------------------------------FSILAKGYVRAGEPQKAE 330
           + P+  V                                   +++L KG  R+ +  +AE
Sbjct: 327 VAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAE 386

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            ++ ++R  G+ P+VV + T+IS  CN     +A+ + ++M + GI P L+TY TL+   
Sbjct: 387 ELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSAL 446

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
             A +    E L Q M  K V P  S   ++ D++
Sbjct: 447 ASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAY 481



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 185/387 (47%), Gaps = 36/387 (9%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           PD+  +N +I     SG   +A+K+F +M D G  P   TYNT+I G+   G  E   +L
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
              M  D   KPN  TYN+L+   C    ++E   ++ +M +  + PD  TY+ L     
Sbjct: 74  RDQMLHD-GPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT 132

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           + GE+     +  E     V     TC I+++G CK+G +  A + L  +    + P  V
Sbjct: 133 RTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTV 192

Query: 242 VFNSLIKGFLDIKDSDG--------------------------------VDKALTL---M 266
           ++N+LI G+  ++D  G                                V KA  L   M
Sbjct: 193 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 252

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           E+ GV P V TF+T++DA+ +AG + KC  +  DM + GI+ D+  F  + K + + G+ 
Sbjct: 253 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 312

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +A +IL  M    V PN  ++ ++I  +  +   ++A  + EKM   G++ ++ TY  L
Sbjct: 313 PEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLL 372

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRP 413
           L G   + Q   AEEL+  +  +G+RP
Sbjct: 373 LKGLCRSSQIDEAEELIYTLRNQGLRP 399



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 200/408 (49%), Gaps = 1/408 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  E   + + +      P   TY+ L   LTR    +++LSL ++  K G+   
Sbjct: 96  LCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLG 155

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +   + ++N   + G V +A ++ + +  +G  PTT  YNTLI GY  V     +  + +
Sbjct: 156 AYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFE 215

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + ++++P+  TYN L+   C    + +A ++V +M  SG+ P   T+NTL  AY   
Sbjct: 216 QM-KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTA 274

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+  +   +L +MQ   ++ +  + G +V  +CK G + +A+  L  M   +V PN  V+
Sbjct: 275 GQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVY 334

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           NS+I  +++  D++     +  M+  GV   +VT++ ++     +  + + +E+   +  
Sbjct: 335 NSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRN 394

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ PD+  ++ +       G+  KA  +L  M KYG+ P +  + T++S   +A ++  
Sbjct: 395 QGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHD 454

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
              +Y++M    + P+   Y  ++  Y   +   +   L + M EKG+
Sbjct: 455 MECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 502



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 180/341 (52%), Gaps = 1/341 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  +A  +   L+  G  PT + Y TL+    + +  +    +  +++   +
Sbjct: 163 LNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHI 222

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD I +NA+IN   +   V +A  +  +M+ SG  P+  T+NTLI  YG  G+ E+   
Sbjct: 223 RPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFT 282

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M Q K +K +  ++  +V+A+C    I EA  ++  M+   + P+A  YN++  AY
Sbjct: 283 VLSDMQQ-KGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 341

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+T +A  ++ +M+N+ V  +  T  +++ G C+   +++A   +Y ++   + P++
Sbjct: 342 IESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDV 401

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N++I    +  D+D   + L  M ++G++P + T+ T++ A +SAG +   + ++  
Sbjct: 402 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQ 461

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           M+   +EP   ++ I+   YVR     K  S+   M + G+
Sbjct: 462 MLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 502



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 127/253 (50%), Gaps = 1/253 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           + G  P++ T+ TL+ A     + +   +++S +++ G+K D I F +++ A  ++G + 
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           EA+ I   M      P    YN++I  Y   G  E++  L++ M ++  V  +  TYN+L
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM-KNSGVSASIVTYNLL 372

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           ++  C  + I+EA  ++Y +   G++PD V+YNT+  A    G+T +A ++L EM    +
Sbjct: 373 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 432

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           RP  RT   +VS     G + D      +M    V P+  ++  ++  ++  ++   V  
Sbjct: 433 RPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVAS 492

Query: 262 ALTLMEEFGVKPD 274
               M E G+  D
Sbjct: 493 LKKEMSEKGIAFD 505


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/438 (25%), Positives = 214/438 (48%), Gaps = 1/438 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G+  EA  +F  +   G  P ++TY +L+    +    + +  L+S++ K G 
Sbjct: 207 IDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGC 266

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D + +NA+IN  S+ G +++A   F +MK  G      T++T +  +   G  +E++K
Sbjct: 267 AADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMK 326

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M + + + PN+ TY  LV   C    +++A  ++ +MV  G+ P+ VTY  +    
Sbjct: 327 LFAQM-RVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGL 385

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A+ +L  M+   V+ NE     ++ G+    N E A+  L +MK   +  ++
Sbjct: 386 CKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDV 445

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            ++ +LI G    +  D     L  M   G++P+ V ++TIMDA   AG   +   +   
Sbjct: 446 SLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHK 505

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           ++ +G +P++  +  L  G  +AG   +A S    MR+ G+ PNV  +T +I G+C    
Sbjct: 506 ILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGS 565

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           + +AM +  +M + G++ +   Y +L+ GY +      A  L   M E G++        
Sbjct: 566 LNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTC 625

Query: 421 VADSWRAIGLAREAKRVL 438
               +  + + +EA+ VL
Sbjct: 626 FISGFCNMNMMQEARGVL 643



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 217/445 (48%), Gaps = 10/445 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   E   + + + + G    ++TY  L+   ++  R +   S   ++++ G+  + + F
Sbjct: 249 GDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTF 308

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +  ++A  + G V EAMK+F +M+  G  P   TY +L+ G    G+ ++++ LL  M  
Sbjct: 309 STFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVH 368

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + + PN  TY ++V   C +  + EA NV+  M   G++ + + Y TL   +     + 
Sbjct: 369 -QGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSE 427

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           RA  +L +M+N  +  +    G ++ G CK+  +++A   L++M    + PN V++ +++
Sbjct: 428 RALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIM 487

Query: 248 KGFLDI-KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
                  K+S+ V     +++  G +P+VVT+  ++D    AG + +    F+ M + G+
Sbjct: 488 DALFKAGKESEAVALLHKILDS-GFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGL 546

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           +P++  ++ L  G+ + G   KA  ++  M   G+  + V++T++I G+     +Q A +
Sbjct: 547 DPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFA 606

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           +  KM E G+  +L  Y   + G+        A  +L  M   G+ P K+    +   ++
Sbjct: 607 LKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQ 666

Query: 427 AIG-------LAREAKRVLKSAEED 444
            +G       L  E + VL S  ED
Sbjct: 667 KLGNMEEASSLQNEMESVLSSCTED 691



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 182/377 (48%), Gaps = 1/377 (0%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P+   FN +I+   + G + EA  +F +MK  GC P   TYN+LI GYG  G  EE  +L
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           +  M +      +  TYN L+  +     +E+A++   +M   G+  + VT++T   A+ 
Sbjct: 258 VSEMRK-SGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFC 316

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           + G    A ++  +M+   + PNE T   +V G CK G ++DA+  L  M    + PN+V
Sbjct: 317 KEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVV 376

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            +  ++ G          D  L+LME  GVK + + ++T++          +  ++ + M
Sbjct: 377 TYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQM 436

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
              G+E D+ ++  L  G  +  +  +A+S+L  M   G+ PN V++TT++     A K 
Sbjct: 437 KNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKE 496

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             A+++  K+ + G  PN+ TY  L+ G  +A     A      M E G+ P       +
Sbjct: 497 SEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTAL 556

Query: 422 ADSWRAIGLAREAKRVL 438
            D +  IG   +A  ++
Sbjct: 557 IDGFCKIGSLNKAMHLM 573


>gi|218184813|gb|EEC67240.1| hypothetical protein OsI_34171 [Oryza sativa Indica Group]
          Length = 458

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 193/382 (50%), Gaps = 6/382 (1%)

Query: 5   VGKGKPHEAHYIFNCLIEEGH---RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK 61
           V +  P  A  +FN +   G     P L TY+ L+    R  R     + +  V K G +
Sbjct: 68  VARDSPAAAVSLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFR 127

Query: 62  PDSILFNAMINACSESGNVDEAMKI-FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            ++I F  ++          +AM I  ++M +  C P   +   L+KG  +  + +E+L+
Sbjct: 128 VEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALE 187

Query: 121 LLQLMSQDKN--VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           LL +M+ D+     P+  +Y  ++  +  +   ++A++  ++M+   I P+ VTY+++  
Sbjct: 188 LLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLGRRISPNVVTYSSIIA 247

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           A  +     +A ++L  M  N V P+  T   I+ GYC  G  ++ +  L +M+   V P
Sbjct: 248 ALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGVEP 307

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           N+V + SL+             K    M + G++PD+ T+ T++  +++ G + +   + 
Sbjct: 308 NVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 367

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           D MV+ GI+PD HVF+IL   Y +  +  +A  + + MR++G++PNVV + TVI   C +
Sbjct: 368 DLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKS 427

Query: 359 VKMQRAMSIYEKMCEIGINPNL 380
             +  AM  +E+M + G+ PN+
Sbjct: 428 GSVDDAMLYFEQMIDEGLTPNI 449



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 179/370 (48%), Gaps = 3/370 (0%)

Query: 47  SILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLI 106
           S+ + +++   D + PD   ++ +I  C  +G +D        +   G +    T+  L+
Sbjct: 78  SLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLL 137

Query: 107 KGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV---A 163
           KG     +  +++ ++     + +  P+  +  IL++  C +N  +EA  +++ M     
Sbjct: 138 KGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRG 197

Query: 164 SGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED 223
            G  PD V+Y T+   + + G++ +A     EM   ++ PN  T   I++  CK   M+ 
Sbjct: 198 GGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDK 257

Query: 224 AMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD 283
           AM  L  M +  V P+ + ++S++ G+            L  M   GV+P+VVT+ ++M+
Sbjct: 258 AMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMN 317

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
                G   K ++IFD M K G+EPDI  +  L +GY   G   +  ++L  M + G+ P
Sbjct: 318 YLCKNGRCTKARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQP 377

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           +  +F  +I  +    K+ +AM ++ KM + G+NPN+  Y T++    ++     A    
Sbjct: 378 DHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYF 437

Query: 404 QVMEEKGVRP 413
           + M ++G+ P
Sbjct: 438 EQMIDEGLTP 447



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 133/242 (54%), Gaps = 1/242 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   +A+  ++ ++     P ++TY++++AAL + +     + +++ + K+G+
Sbjct: 211 INGFFKEGDSDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 270

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + ++++++    SG   E +    KM+  G +P   TY +L+      G+  ++ K
Sbjct: 271 MPDCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARK 330

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M++ + ++P+  TY  L++ + +K ++ E   ++  MV +GIQPD   +N L  AY
Sbjct: 331 IFDSMTK-RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAY 389

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+  +  +A  +  +M+ + + PN    G ++   CK G+++DAM +  +M +  + PN+
Sbjct: 390 AKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNI 449

Query: 241 VV 242
           ++
Sbjct: 450 IL 451



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 4/246 (1%)

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL-DIKDSD 257
           ++V P+  T  I++   C+ G ++     L  + +       + F  L+KG   D + SD
Sbjct: 89  DEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSD 148

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK---AGIEPDIHVFS 314
            +D  L  M E    PDV + + ++          +  E+   M      G  PD+  ++
Sbjct: 149 AMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 208

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            +  G+ + G+  KA S    M    + PNVV ++++I+  C A  M +AM +   M + 
Sbjct: 209 TVINGFFKEGDSDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKN 268

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G+ P+  TY ++L GY  + QP      L  M   GV P   T + + +     G   +A
Sbjct: 269 GVMPDCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKA 328

Query: 435 KRVLKS 440
           +++  S
Sbjct: 329 RKIFDS 334


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/489 (24%), Positives = 225/489 (46%), Gaps = 40/489 (8%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   +A   F  +   G  P++ T   L+  L ++++  ++     ++    + PD   
Sbjct: 111 EGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVST 170

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           FN +IN     G + +A  + +KM++SG  P+  TYNT++  Y   G+ + +L+L+  M 
Sbjct: 171 FNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMG 230

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             K ++ +  TYN+LV   C  N   + + ++ KM    I P+ +TYN++   + + G+ 
Sbjct: 231 S-KGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKI 289

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++  EM    + PN  T   ++ G+C +GN E A+  L  M+     PN V +++L
Sbjct: 290 GAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSAL 349

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + G       +     L  M   G+    + ++ ++D     GL+ +  ++ D M+K G+
Sbjct: 350 LNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGV 409

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN------AVK 360
            PD+  FS+L  G+ R G+ +  + I+  M K G+ PN +++TT+I  +C       A K
Sbjct: 410 VPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFK 469

Query: 361 MQRAMS-----------------------------IYEKMCEIGINPNLKTYETLLWGYG 391
           +  AMS                              +  M +IG  PN  T++ ++ GYG
Sbjct: 470 VYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYG 529

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
            +    +A  +   M + G  P   T   +  +    G  +EAKR+L    +    +P+ 
Sbjct: 530 NSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLL----DKLHYIPSA 585

Query: 452 KDEIAVESI 460
            D +   +I
Sbjct: 586 VDTVTYNTI 594



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 209/404 (51%), Gaps = 1/404 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+L  +GK  +A Y+   + E G+ P+++TY T++    ++ R+K+ L LI ++   G+
Sbjct: 175 INVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGI 234

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + D+  +N +++   ++    +   + +KM+     P   TYN++I G+   GK   + +
Sbjct: 235 EADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATR 294

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + Q MS   N+ PN  TYN L+   C   + E+A  ++  M A+G +P+ V+Y+ L    
Sbjct: 295 IFQEMSM-LNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGL 353

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            ++ +   ++ +L  M+ N +         ++ G C+ G + ++++ L +M +  V P++
Sbjct: 354 CRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDV 413

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V F+ LI GF  +     V + +  M + G+ P+ + ++T++  +   G + +  +++  
Sbjct: 414 VTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVA 473

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M + G + +  + ++L     + G+   AE     M K G  PN + F  +I+G+ N+  
Sbjct: 474 MSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGN 533

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
             +A S++++M + G +P+  TY  LL     A +   A+ LL 
Sbjct: 534 GLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLD 577



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 108/491 (21%), Positives = 197/491 (40%), Gaps = 77/491 (15%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            G   +A  +F+ +I+ GH P+  TY  L+ AL R  +FK    L+ K+       D++ +
Sbjct: 532  GNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTY 591

Query: 68   NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            N ++    +SG + +A+ +F +M      P + TY  +  G    GK   +L     +  
Sbjct: 592  NTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLG 651

Query: 128  DKNVKPNDRTYNILV----RAWCSK---------------------NSIEEAWNVVYKMV 162
               V P    Y   V    RA  SK                     N I   ++ + KM 
Sbjct: 652  KGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMA 711

Query: 163  ASG-----------IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
             +G           I P   TYN L   YA+     +   +   M    + P++ TC  +
Sbjct: 712  KAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSL 771

Query: 212  VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---MEE 268
            + G+CK   ++  ++ L +M    V  +   FN LI  +    ++D V KA  L   M  
Sbjct: 772  ILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYC---ETDEVGKAFDLVNIMNL 828

Query: 269  FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD----------------IH- 311
            F + PD+ T  +I+   S    + +   +  +M++ G  PD                IH 
Sbjct: 829  FDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHG 888

Query: 312  VF------------------SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
             F                  S L +G  + G+ ++A+ +L  M +  + P +  FTT++ 
Sbjct: 889  AFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMH 948

Query: 354  GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             +C    +  A+ + + M    +  ++  Y  L+ G         A +L + ++++G+ P
Sbjct: 949  MFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWP 1008

Query: 414  KKSTIQLVADS 424
              +T  ++ D+
Sbjct: 1009 NMTTYCILIDA 1019



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 113/282 (40%), Gaps = 40/282 (14%)

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           + N     +++  Y +EG + DA+     M     +P++   N L+   +  +    V  
Sbjct: 95  KSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWL 154

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK---------------------------C 294
               M    V PDV TF+ +++     G + K                           C
Sbjct: 155 FFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYC 214

Query: 295 Q--------EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
           +        E+ D M   GIE D   +++L     +     K   +L  MRK  + PN +
Sbjct: 215 KKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEI 274

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            + ++I+G+    K+  A  I+++M  + + PN  TY  L+ G+       +A  +L++M
Sbjct: 275 TYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMM 334

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSM 448
           E  G +P +     V+ S    GL R AK  L  +  +R  M
Sbjct: 335 EATGPKPNE-----VSYSALLNGLCRHAKFELSKSILERMRM 371


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 207/418 (49%), Gaps = 2/418 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L   GK  EA+ I   + ++G  P ++TYT L+ AL   ++    + L +K++    
Sbjct: 271 IRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSH 330

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD + +  +++  S+ G++D+  KI+ +M+  G  P   T+  L+      G+  E+  
Sbjct: 331 KPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFD 390

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M + + V PN  TYN L+      N +++A ++   M + G++P A TY  L   +
Sbjct: 391 LLDTMRK-QGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYH 449

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G   +A +   +M+   + PN   C   +    + G + +A      +K   + P+ 
Sbjct: 450 GKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDS 509

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N ++K +  +   D   K L+ M +   +PDV+  ++++D    AG + +  ++F  
Sbjct: 510 VTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCR 569

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M +  + P +  ++IL  G  + G+ QKA  +  SM  +G  PN + F T++   C   +
Sbjct: 570 MEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDE 629

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
           +  A+ ++ KM  +   P++ T+ T++ G+ +  Q   A  L   M +K +RP   T+
Sbjct: 630 VDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM-KKLLRPDHVTL 686



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 205/437 (46%), Gaps = 36/437 (8%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E G      +Y  L+  L +    K  L +  ++  +G+KP    F+A++ A  +  N+ 
Sbjct: 187 EAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIK 246

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
             M + ++M+  G +P   TY   I+  G  GK +E+ ++++ M  D    P+  TY +L
Sbjct: 247 TVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDD-GCGPDVVTYTVL 305

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           + A C+   +++A  +  KM +S  +PD VTY TL   ++  G   + E++  EM+ +  
Sbjct: 306 IDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGY 365

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            P+  T  I+V+  CK G + +A   L  M++  V PNL  +N+LI G L     D    
Sbjct: 366 APDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALD 425

Query: 262 ALTLMEEFGVKPDVVTFSTIMD-----------------------------------AWS 286
             + ME  GV+P   T+  ++D                                   + +
Sbjct: 426 LFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLA 485

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
             G +G+ + +F+++  +G+ PD   ++++ K Y + G+  +A  +L+ M K    P+V+
Sbjct: 486 EMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVI 545

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
           +  ++I     A +++ A  ++ +M E+ + P + TY  LL G G+  Q  +A +L + M
Sbjct: 546 VINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESM 605

Query: 407 EEKGVRPKKSTIQLVAD 423
              G  P   T   + D
Sbjct: 606 NGHGCSPNTITFNTLLD 622



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/424 (23%), Positives = 190/424 (44%), Gaps = 36/424 (8%)

Query: 15  YIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINAC 74
           ++F+ +  +  R  + TY  +  +L  +   +   S + K+ + G   ++  +N +I+  
Sbjct: 145 FVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFL 204

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
            +SG   EA++++++M   G KP+  T++ L+   G     +  + LL+ M +   ++PN
Sbjct: 205 LQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEM-ESMGLRPN 263

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
             TY I +R       I+EA+ ++ +M   G  PD VTY                     
Sbjct: 264 IYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYT-------------------- 303

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
                          +++   C    ++DAM    +MK     P+ V + +L+  F D  
Sbjct: 304 ---------------VLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCG 348

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
             D V+K  T ME  G  PDVVTF+ +++A   AG + +  ++ D M K G+ P++H ++
Sbjct: 349 HLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYN 408

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            L  G +RA     A  + ++M   GV P    +  +I     +    +A+  +EKM   
Sbjct: 409 TLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKAR 468

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           GI PN+      L+   E  +   A+ +   ++  G+ P   T  ++   +  +G   EA
Sbjct: 469 GIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEA 528

Query: 435 KRVL 438
            ++L
Sbjct: 529 IKLL 532



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 175/357 (49%), Gaps = 10/357 (2%)

Query: 35   LVAALTRQKRFKSILSLISKVEKD-GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS 93
            ++  L + K+     ++  K  K+ G+KP   ++N +I+   E  NV+ A  +F++MK +
Sbjct: 760  IIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSA 819

Query: 94   GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
            GC P T TYN+LI  +G  GK  E   L   M   +  KPN  TYN+++      N +++
Sbjct: 820  GCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLT-RGCKPNTITYNMVISNLVKSNRLDK 878

Query: 154  AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
            A ++ Y +V+    P   T+  L     + G    A +M   M +   RPN     I+V+
Sbjct: 879  AMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVN 938

Query: 214  GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG-VDKALTLMEEF--- 269
            GY K G+++ A  F  RM +  + P+L  +  L+    DI    G VD AL   E+    
Sbjct: 939  GYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILV----DILCIAGRVDDALHYFEKLKQA 994

Query: 270  GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
            G+ PD+V ++ +++    +    +   +F +M   GI PD++ ++ L       G  ++A
Sbjct: 995  GLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEA 1054

Query: 330  ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
              I   ++  G+ PNV  +  +I G+  +   + A  IY+KM   G +PN  T+  L
Sbjct: 1055 GKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/504 (23%), Positives = 215/504 (42%), Gaps = 84/504 (16%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +FN L   G  P  +TY  ++   ++  +    + L+S++ K   +PD I+ 
Sbjct: 488 GRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVI 547

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N++I+   ++G V+EA ++F +M++    PT  TYN L+ G G  G+ +++++L + M+ 
Sbjct: 548 NSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMN- 606

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG---------------------- 165
                PN  T+N L+   C  + ++ A  + YKM                          
Sbjct: 607 GHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIK 666

Query: 166 ------------IQPDAVTYNTLARAYAQYGETYRA----EQMLFEMQNNQVRPNERTCG 209
                       ++PD VT  TL     + G+   A    E   +++ +N  R       
Sbjct: 667 NAIWLFHQMKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWED-- 724

Query: 210 IIVSGYCKEGNMEDAMRFLYRM------------------------------------KE 233
            ++ G   E   E A+ F  R+                                    KE
Sbjct: 725 -VMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKE 783

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGL 290
           L V P L V+N LI GFL++ +   V+ A  L EE    G  PD  T+++++DA   +G 
Sbjct: 784 LGVKPTLKVYNLLIDGFLEVHN---VEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGK 840

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           + +  +++D+M+  G +P+   ++++    V++    KA  +  ++      P    F  
Sbjct: 841 INELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGP 900

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I G   + ++  A  +++ M   G  PN   Y  L+ GYG+      A E  + M ++G
Sbjct: 901 LIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEG 960

Query: 411 VRPKKSTIQLVADSWRAIGLAREA 434
           +RP   +  ++ D     G   +A
Sbjct: 961 IRPDLKSYTILVDILCIAGRVDDA 984



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/451 (21%), Positives = 199/451 (44%), Gaps = 39/451 (8%)

Query: 26   RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
            RP ++T+ T++    +Q + K+ + L  +++K  ++PD +    ++    +SG +++A +
Sbjct: 646  RPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKK-LLRPDHVTLCTLLPGVIKSGQIEDAFR 704

Query: 86   IFQK---------------------MKDSG----------------CKPTTSTYNTLIKG 108
            I +                      + ++G                CK   S    +IK 
Sbjct: 705  ITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICK-DDSVLIPIIKV 763

Query: 109  YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP 168
                 K   +  +    +++  VKP  + YN+L+  +   +++E AWN+  +M ++G  P
Sbjct: 764  LCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAP 823

Query: 169  DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
            D  TYN+L  A+ + G+      +  EM     +PN  T  +++S   K   ++ AM   
Sbjct: 824  DTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLY 883

Query: 229  YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
            Y +   +  P    F  LI G L     D   +    M  +G +P+   ++ +++ +   
Sbjct: 884  YNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKL 943

Query: 289  GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
            G +    E F  MVK GI PD+  ++IL      AG    A      +++ G+ P++V +
Sbjct: 944  GHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAY 1003

Query: 349  TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
              +I+G   + + + A+S++ +M   GI P+L TY +L+   G       A ++ + ++ 
Sbjct: 1004 NLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQF 1063

Query: 409  KGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             G++P   T   +   +   G +  A  + K
Sbjct: 1064 IGLKPNVFTYNALIRGYTLSGNSELAYGIYK 1094



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 172/368 (46%), Gaps = 1/368 (0%)

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N M+        V++   +F  M+    +    TY  + K     G   ++   L+ M +
Sbjct: 128 NHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMRE 187

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              V  N  +YN L+         +EA  V  +MV+ G++P   T++ L  A  +     
Sbjct: 188 AGFVL-NAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIK 246

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
               +L EM++  +RPN  T  I +    ++G +++A R + RM +    P++V +  LI
Sbjct: 247 TVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLI 306

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
                 +  D      T M+    KPD VT+ T++D +S  G + K ++I+ +M   G  
Sbjct: 307 DALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYA 366

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+  F+IL     +AG   +A  +L +MRK GV PN+  + T+ISG   A ++  A+ +
Sbjct: 367 PDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDL 426

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           +  M  +G+ P   TY  L+  +G++  P +A E  + M+ +G+ P          S   
Sbjct: 427 FSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAE 486

Query: 428 IGLAREAK 435
           +G   EAK
Sbjct: 487 MGRLGEAK 494



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 167/359 (46%), Gaps = 3/359 (0%)

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
            K DS+L   +I    +      A  +F K  K+ G KPT   YN LI G+  V   E + 
Sbjct: 752  KDDSVLI-PIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAW 810

Query: 120  KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
             L + M +     P+  TYN L+ A      I E +++  +M+  G +P+ +TYN +   
Sbjct: 811  NLFEEM-KSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISN 869

Query: 180  YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
              +     +A  + + + +    P   T G ++ G  K G ++DA      M      PN
Sbjct: 870  LVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPN 929

Query: 240  LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
              ++N L+ G+  +   D   +    M + G++PD+ +++ ++D    AG +      F+
Sbjct: 930  SAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFE 989

Query: 300  DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
             + +AG++PD+  ++++  G  R+   ++A S+   M+  G+ P++  + ++I       
Sbjct: 990  KLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVG 1049

Query: 360  KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
             ++ A  IYE++  IG+ PN+ TY  L+ GY  +     A  + + M   G  P   T 
Sbjct: 1050 MIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 152/336 (45%), Gaps = 42/336 (12%)

Query: 16   IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
            +F  +   G  P   TY +L+ A  +  +   +  L  ++   G KP++I +N +I+   
Sbjct: 812  LFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLV 871

Query: 76   ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
            +S  +D+AM ++  +      PT  T+  LI G    G+ +++ ++   M      +PN 
Sbjct: 872  KSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVH-YGCRPNS 930

Query: 136  RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
              YNILV  +     ++ A     +MV  GI+PD  +Y                      
Sbjct: 931  AIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYT--------------------- 969

Query: 196  MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
                          I+V   C  G ++DA+ +  ++K+  + P+LV +N +I G   +  
Sbjct: 970  --------------ILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMING---LGR 1012

Query: 256  SDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
            S   ++AL+L  E    G+ PD+ T+++++      G++ +  +I++++   G++P++  
Sbjct: 1013 SQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFT 1072

Query: 313  FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
            ++ L +GY  +G  + A  I   M   G  PN   F
Sbjct: 1073 YNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 94/179 (52%), Gaps = 5/179 (2%)

Query: 2    NILV---GK-GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
            NILV   GK G    A   F  +++EG RP L +YT LV  L    R    L    K+++
Sbjct: 934  NILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQ 993

Query: 58   DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
             G+ PD + +N MIN    S   +EA+ +F +M++ G  P   TYN+LI   G VG  EE
Sbjct: 994  AGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEE 1053

Query: 118  SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
            + K+ + + Q   +KPN  TYN L+R +    + E A+ +  KM+  G  P+  T+  L
Sbjct: 1054 AGKIYEEL-QFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 64/116 (55%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            ++IL   G+  +A + F  L + G  P L+ Y  ++  L R +R +  LSL  +++  G+
Sbjct: 972  VDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGI 1031

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
             PD   +N++I      G ++EA KI+++++  G KP   TYN LI+GY   G  E
Sbjct: 1032 VPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSE 1087



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 10/153 (6%)

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI---- 352
           +FD M +  I  ++  + I+ K     G  ++A S L  MR+ G   N   +  +I    
Sbjct: 146 VFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLL 205

Query: 353 -SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
            SG+C     + A+ +Y +M   G+ P+LKT+  L+   G+ +       LL+ ME  G+
Sbjct: 206 QSGFC-----KEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGL 260

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           RP   T  +        G   EA R++K  ++D
Sbjct: 261 RPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDD 293



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 6/206 (2%)

Query: 240 LVVFNSL-IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           L++F SL I+G L    S     AL  M E G   +  +++ ++     +G   +  E++
Sbjct: 163 LIIFKSLFIRGGLRQAPS-----ALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVY 217

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
             MV  G++P +  FS L     +    +    +L  M   G+ PN+  +T  I      
Sbjct: 218 RRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRD 277

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            K+  A  I ++M + G  P++ TY  L+     A++   A  L   M+    +P K T 
Sbjct: 278 GKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTY 337

Query: 419 QLVADSWRAIGLAREAKRVLKSAEED 444
             + D +   G   + +++    E D
Sbjct: 338 VTLLDKFSDCGHLDKVEKIWTEMEAD 363


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 210/424 (49%), Gaps = 2/424 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
            F+ L  +G +P  ++YT+++  L +  R      L +++E +   P +  +N MI    
Sbjct: 271 FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 330

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
            +G  ++A K+ +++++ GC P+  ++N+++   G   K +E+L L ++M +D   +PN 
Sbjct: 331 SAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD--AEPNS 388

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TYNI++   C    +EEA+ ++ +M  + + P+ +T N +     +  +   A ++   
Sbjct: 389 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 448

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
                  P+  T   ++ G  K+G +++A R   +M +   + N VV+ SLI+ F     
Sbjct: 449 ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGR 508

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            +   K    +   G KPD+   +T MD    AG + K + IF+D+   G  PD+  +SI
Sbjct: 509 KEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSI 568

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  G  +AG+ ++  +I  +M++ G   +   +  V+ G+C + K+ +A  I E+M E  
Sbjct: 569 LIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC 628

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           + P + TY  ++ G  +  +   A  L +  + KG+         + D +  +G   EA 
Sbjct: 629 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAY 688

Query: 436 RVLK 439
            +L+
Sbjct: 689 LILE 692



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 112/469 (23%), Positives = 214/469 (45%), Gaps = 37/469 (7%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +P  A  +   + E G+   +  +TTLV AL R+ +    L+L+ +V+   ++PD +L+N
Sbjct: 194 RPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYN 253

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
             I+   ++GNVD A K F ++K  G KP   +Y ++I      G+  E+ +L   M  +
Sbjct: 254 VCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAE 313

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           ++V P    YN ++  + S    E+A+ ++ ++   G  P  V++N++     +  +   
Sbjct: 314 RSV-PCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDE 372

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A   LFE+      PN  T  II+   C  G +E+A R L  M+   + PNL+  N ++ 
Sbjct: 373 ALS-LFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVD 431

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC-------------- 294
                +  +   K      + G  PD VT+ +++D     G + +               
Sbjct: 432 RLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNA 491

Query: 295 ---------------------QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
                                 +IF ++++ G +PD+ + +       +AGE +K   I 
Sbjct: 492 NPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIF 551

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             +R YG  P+V  ++ +I G   A + +   +I+  M + G   + + Y  ++ G+ ++
Sbjct: 552 EDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKS 611

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
            +  +A E+L+ M+EK V+P  +T   + D    I    EA  + + A+
Sbjct: 612 GKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 660



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 206/442 (46%), Gaps = 7/442 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L   G+  EA+ I + +      P L+T   +V  L + ++ +    +     + G 
Sbjct: 395 IDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGC 454

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + + ++I+   + G VDEA ++F+KM D+G       Y +LI+ +   G+ E+  K
Sbjct: 455 NPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHK 514

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + + + +  KP+    N  +        +E+   +   + + G  PD  +Y+ L    
Sbjct: 515 IFKELIR-RGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 573

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+      +   M+      + R    +V G+CK G +  A   L  MKE  V P +
Sbjct: 574 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 633

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             + +++ G   I   D +D+A  L EE    G++ +VV +S+++D +   G + +   I
Sbjct: 634 ATYGAIVDGLAKI---DRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI 690

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            ++M+K G+ P+++ ++ L    V+A E  +A     SM++    PN   ++ +I+G C 
Sbjct: 691 LEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCR 750

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             K  +A   ++ M + G+ PN+ TY T++ G  +      A  L +  +  G  P  ++
Sbjct: 751 VQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAAS 810

Query: 418 IQLVADSWRAIGLAREAKRVLK 439
              + +       A EA +V +
Sbjct: 811 FNALIEGMSNANRAMEAYQVFE 832



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 187/416 (44%), Gaps = 45/416 (10%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG+  EA+ +F  +++ GH    + YT+L+       R +    +  ++ + G KPD  L
Sbjct: 471 KGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTL 530

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            N  ++   ++G V++   IF+ ++  G  P   +Y+ LI G    G+  E+  +   M 
Sbjct: 531 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 590

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           Q +    + R YN +V  +C    + +A+ ++ +M    +QP   TY             
Sbjct: 591 Q-QGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATY------------- 636

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
                                 G IV G  K   +++A       K   +  N+V+++SL
Sbjct: 637 ----------------------GAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSL 674

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           I GF  +     +D+A  ++EE    G+ P+V T+++++DA   A  + +    F  M +
Sbjct: 675 IDGFGKVGR---IDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 731

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
               P+ + +SIL  G  R  +  KA      M+K G+ PNVV +TT+ISG      +  
Sbjct: 732 MKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITD 791

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           A S++E+    G  P+  ++  L+ G   A    RA E  QV EE  +R  +  I+
Sbjct: 792 AYSLFERFKANGGIPDAASFNALIEGMSNAN---RAMEAYQVFEETRLRGCRINIK 844



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/380 (21%), Positives = 167/380 (43%), Gaps = 39/380 (10%)

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ------------ 127
           +D+A+     M+    +P  S Y  LI       +PE +L+LL+ M +            
Sbjct: 160 LDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTT 219

Query: 128 ----------------------DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
                                    ++P+   YN+ +  +    +++ AW   +++ A G
Sbjct: 220 LVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQG 279

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           ++PD V+Y ++     + G    AE++  +M+  +  P       ++ GY   G  EDA 
Sbjct: 280 LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAY 339

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF--GVKPDVVTFSTIMD 283
           + L R++E    P++V FNS++     +     VD+AL+L E      +P+  T++ I+D
Sbjct: 340 KLLERLRERGCIPSVVSFNSILTC---LGKKRKVDEALSLFEVMKKDAEPNSSTYNIIID 396

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
                G + +   I D+M  A + P++   +I+     +A + ++A  I  S  + G +P
Sbjct: 397 MLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNP 456

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           + V + ++I G     ++  A  ++EKM + G N N   Y +L+  +    +     ++ 
Sbjct: 457 DCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIF 516

Query: 404 QVMEEKGVRPKKSTIQLVAD 423
           + +  +G +P  + +    D
Sbjct: 517 KELIRRGCKPDLTLLNTYMD 536



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 103/213 (48%), Gaps = 1/213 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA+ +F     +G    ++ Y++L+    +  R      ++ ++ K G+ P+   +N+++
Sbjct: 651 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 710

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +A  ++  ++EA+  FQ MK+  C P T TY+ LI G   V K  ++    Q M Q + +
Sbjct: 711 DALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDM-QKQGL 769

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PN  TY  ++       +I +A+++  +  A+G  PDA ++N L    +       A Q
Sbjct: 770 VPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 829

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           +  E +    R N ++C  ++    K   +E A
Sbjct: 830 VFEETRLRGCRINIKSCISLLDALNKSECLEQA 862



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/211 (23%), Positives = 101/211 (47%), Gaps = 1/211 (0%)

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           PN+  C  + +   +   ++DA+  +  M+ L+  P    +  LI    + +  +   + 
Sbjct: 143 PNQ-ACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALEL 201

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           L  M+E G +  V  F+T++ A +  G +     + D++  + +EPDI ++++    + +
Sbjct: 202 LRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGK 261

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           AG    A      ++  G+ P+ V +T++I   C A ++  A  ++ +M      P    
Sbjct: 262 AGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYA 321

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           Y T++ GYG A +   A +LL+ + E+G  P
Sbjct: 322 YNTMIMGYGSAGRFEDAYKLLERLRERGCIP 352



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/189 (20%), Positives = 87/189 (46%), Gaps = 1/189 (0%)

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           A+ +M     +P    ++ ++ A + A    +  E+   M + G E  +H+F+ L +   
Sbjct: 166 AVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALA 225

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           R G+   A +++  ++   + P++V++   I  +  A  +  A   + ++   G+ P+  
Sbjct: 226 REGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDV 285

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           +Y +++W   +A +   AEEL   ME +   P       +   + + G   +A ++L+  
Sbjct: 286 SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERL 345

Query: 442 EEDRQSMPN 450
            E R  +P+
Sbjct: 346 RE-RGCIPS 353


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 207/473 (43%), Gaps = 48/473 (10%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           HEA ++ N L       ++ +Y  L   L+R      +  L   +  DG++P+ I FN M
Sbjct: 137 HEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTM 196

Query: 71  INACSESGNV-----------------------------------DEAMKIFQKMKDSGC 95
           +NA  + GNV                                    +A K+F+ M   GC
Sbjct: 197 VNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGC 256

Query: 96  KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
                +Y  LI G+  VGK +E+L+L   M +D    P+  TY +LV A+C      EA 
Sbjct: 257 LRNEVSYTNLIHGFCEVGKIDEALELFFQMKED-GCFPDVPTYTVLVAAFCEVGKETEAL 315

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
               +MV +GI+P+  TY  L   + + G+     +ML  M    +  +      ++ GY
Sbjct: 316 KFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGY 375

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           CK G MEDA+  L  MK  +V PN   +N LI GF   K  D     L  M E  + P++
Sbjct: 376 CKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNL 435

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           VT++T++     A ++     +   M+K G  PD   F        + G+ ++A  +  S
Sbjct: 436 VTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFES 495

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           +++     N  ++T +I G+C A K   A  ++++M   G  PN  T+  LL G  +  +
Sbjct: 496 LKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGK 555

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSM 448
              A  L+ VM +   +P   T  ++ +             +L+ ++ DR +M
Sbjct: 556 VEDAMSLVDVMGKFDAKPTVHTYTILIE------------EILRESDFDRANM 596



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/444 (24%), Positives = 202/444 (45%), Gaps = 36/444 (8%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
            TYT+L+    +         +   + ++G   + + +  +I+   E G +DEA+++F +
Sbjct: 226 FTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQ 285

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           MK+ GC P   TY  L+  +  VGK  E+LK  + M ++  ++PN  TY +L+  +C   
Sbjct: 286 MKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVEN-GIEPNVYTYTVLIDYFCKVG 344

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            ++E   ++  M+  G+    V +N L   Y + G    A  +L  M+ N+V PN RT  
Sbjct: 345 KMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYN 404

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            ++ G+C++ +M+ AM  L +M E ++ PNLV +N+LI G    +  D   +   LM + 
Sbjct: 405 ELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKD 464

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G  PD  TF   +D     G + +  ++F+ + +   E +  +++ L  GY +A +   A
Sbjct: 465 GFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDA 524

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI---------------------- 367
             +   M   G  PN + F  ++ G     K++ AMS+                      
Sbjct: 525 HLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEE 584

Query: 368 -------------YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
                         ++M   G  PN+ TY   +  Y    +   AEE++  ++E+G+   
Sbjct: 585 ILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLD 644

Query: 415 KSTIQLVADSWRAIGLAREAKRVL 438
                ++ +++  IG    A  VL
Sbjct: 645 SFIYDVLVNAYGCIGQLDSAFGVL 668



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 194/414 (46%), Gaps = 1/414 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA  +F  + E+G  P + TYT LVAA     +    L    ++ ++G++P+   +
Sbjct: 274 GKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTY 333

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+   + G +DE M++   M + G   +   +N LI GY   G  E+++ +L  M  
Sbjct: 334 TVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKL 393

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +K V PN RTYN L+  +C K S++ A  ++ KM  + + P+ VTYNTL     +     
Sbjct: 394 NK-VCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVD 452

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++   M  +   P++RT    +   CK G +E A +    +KE     N  ++ +LI
Sbjct: 453 SAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALI 512

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G+   +           M   G  P+ +TF+ ++D     G +     + D M K   +
Sbjct: 513 DGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAK 572

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P +H ++IL +  +R  +  +A   L  M   G  PNVV +T  I  +C   ++  A  +
Sbjct: 573 PTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEM 632

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             K+ E GI  +   Y+ L+  YG   Q   A  +L  M + G  P + T  ++
Sbjct: 633 VVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSIL 686



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 181/383 (47%), Gaps = 7/383 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA   F  ++E G  P + TYT L+    +  +    + ++S + + G+    + F
Sbjct: 309 GKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPF 368

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           NA+I+   + G +++A+ +   MK +   P + TYN LI G+      + ++ LL  M +
Sbjct: 369 NALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYE 428

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +K + PN  TYN L+   C    ++ AW + + M+  G  PD  T+        + G+  
Sbjct: 429 NK-LSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVE 487

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A Q+   ++      NE     ++ GYCK     DA     RM      PN + FN L+
Sbjct: 488 QAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLL 547

Query: 248 KGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            G   ++    V+ A++L   M +F  KP V T++ +++         +     D M+ +
Sbjct: 548 DG---LRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISS 604

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G +P++  ++   K Y R G   +AE ++  +++ G+  +  ++  +++ +    ++  A
Sbjct: 605 GCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSA 664

Query: 365 MSIYEKMCEIGINPNLKTYETLL 387
             +  +M + G  P+ +TY  LL
Sbjct: 665 FGVLIRMFDTGCEPSRQTYSILL 687



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 176/376 (46%), Gaps = 4/376 (1%)

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N+MI +C  S    EA  +   +       + ++YN L       G  +E   L + M  
Sbjct: 127 NSMIKSCVSS---HEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLN 183

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D  V+PN  ++N +V A C   ++  A      ++  G   D+ TY +L   Y +  E  
Sbjct: 184 D-GVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELG 242

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++   M       NE +   ++ G+C+ G +++A+   ++MKE    P++  +  L+
Sbjct: 243 DAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLV 302

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             F ++       K    M E G++P+V T++ ++D +   G M +  E+   M++ G+ 
Sbjct: 303 AAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLV 362

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
             +  F+ L  GY + G  + A  +L SM+   V PN   +  +I G+C    M RAM++
Sbjct: 363 SSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMAL 422

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
             KM E  ++PNL TY TL+ G  +A+    A  L  +M + G  P + T     D    
Sbjct: 423 LNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCK 482

Query: 428 IGLAREAKRVLKSAEE 443
           +G   +A +V +S +E
Sbjct: 483 MGKVEQAHQVFESLKE 498



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/460 (22%), Positives = 198/460 (43%), Gaps = 51/460 (11%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           + N + E    P L+TY TL+  L + +   S   L   + KDG  PD   F A I+   
Sbjct: 422 LLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLC 481

Query: 76  ESGNVDEAMKIFQKMKD-----------------------------------SGCKPTTS 100
           + G V++A ++F+ +K+                                    GC P + 
Sbjct: 482 KMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSI 541

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
           T+N L+ G    GK E+++ L+ +M +  + KP   TY IL+     ++  + A   + +
Sbjct: 542 TFNVLLDGLRKEGKVEDAMSLVDVMGK-FDAKPTVHTYTILIEEILRESDFDRANMFLDQ 600

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           M++SG QP+ VTY    +AY + G    AE+M+ +++   +  +     ++V+ Y   G 
Sbjct: 601 MISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQ 660

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFL---DIKDSDGVDKALTLMEEFGVKPDVVT 277
           ++ A   L RM +    P+   ++ L+K  +     K+  G+D     +    +  D   
Sbjct: 661 LDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLD-----LNSTNISVDNAN 715

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
              I D      L       F+ MV+ G  P+++ +S L KG  +      A  +   M+
Sbjct: 716 IWKIADFEIITML-------FEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMK 768

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
           + G+ P+  +  +++S  C     + A+ + + M E     +L++Y+ L+ G  E     
Sbjct: 769 ESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQE 828

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           +AEE+ + +   G    +   +++ D     G   E  ++
Sbjct: 829 KAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQL 868



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 102/427 (23%), Positives = 179/427 (41%), Gaps = 20/427 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   GK  +AH +F  L E+        YT L+    + ++F     L  ++  +G 
Sbjct: 477 IDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGC 536

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+SI FN +++   + G V++AM +   M     KPT  TY  LI+        + +  
Sbjct: 537 FPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANM 596

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L  M      +PN  TY   ++A+C +  + EA  +V K+   GI  D+  Y+ L  AY
Sbjct: 597 FLDQMIS-SGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAY 655

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGI-----IVSGYCKEGNMEDAMRFLYRMKELE 235
              G+   A  +L  M +    P+ +T  I     I   Y KEG   D            
Sbjct: 656 GCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNS--------- 706

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
              N+ V N+ I     I D + +      M E G  P+V T+S ++        +    
Sbjct: 707 --TNISVDNANI---WKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAF 761

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
            +F+ M ++GI P  ++ + L     + G  ++A  +L SM +Y    ++  +  ++ G 
Sbjct: 762 RLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGL 821

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
                 ++A  I+  +   G N +   ++ LL G           +L  +ME+ G R   
Sbjct: 822 FEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHS 881

Query: 416 STIQLVA 422
            T  +++
Sbjct: 882 DTHTMLS 888



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 97/203 (47%), Gaps = 3/203 (1%)

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
           V NS+IK  +   ++  V   LT   EF +   V +++ +    S  GL+ +   +F DM
Sbjct: 125 VRNSMIKSCVSSHEARFVLNLLT-HHEFSLS--VTSYNRLFMVLSRFGLIDELNCLFKDM 181

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           +  G+EP++  F+ +   + + G    A++    + K+G   +   +T++I G+C   ++
Sbjct: 182 LNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHEL 241

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             A  ++E M + G   N  +Y  L+ G+ E  +   A EL   M+E G  P   T  ++
Sbjct: 242 GDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVL 301

Query: 422 ADSWRAIGLAREAKRVLKSAEED 444
             ++  +G   EA +  +   E+
Sbjct: 302 VAAFCEVGKETEALKFFEEMVEN 324


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 205/448 (45%), Gaps = 23/448 (5%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKS--ILSLISKVEKDGMKPDSILFNAM 70
           A+ + N +   G  P  + Y   + ++  Q++  S  +L L  K+  + +  + +L    
Sbjct: 196 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVN 255

Query: 71  INACSES----GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +   +      G  D+A ++ ++M   G  P TSTY+ +I    +  K E++  L Q M 
Sbjct: 256 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 315

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
               V P+  TY IL+ ++C    IE+A  +  +M + G  P  VTY  L  AY +  + 
Sbjct: 316 M-VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 374

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM--------------- 231
            +A  +   M +   RPN+ T G +V G CK GN+  A     ++               
Sbjct: 375 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC 434

Query: 232 -KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
                + PN+V + +L+ G       D   + L  M   G +P+ + +  ++D +  AG 
Sbjct: 435 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 494

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           +   QE+F  M K G  P +H ++ L     + G    A  +L+ M K    PNVV +T 
Sbjct: 495 IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTA 554

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I G C   + ++A+ +   M E G +PN+ TY  L+ G G+A +   + +L   M  KG
Sbjct: 555 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVL 438
             P   T +++ +   A GL  +A+ +L
Sbjct: 615 CSPNYVTYRVLINHLCAAGLLDKARLLL 642



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 200/435 (45%), Gaps = 25/435 (5%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G GK  +A  +   ++ +G  P   TY+ ++  L    + +    L  +++  G+ PD
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +  +I++  ++G +++A  +F++M+  GC PT  TY  LI  Y    +  ++  +  
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D   +PND TY  LV   C   +I +A+ V  K++ +    D+  Y          
Sbjct: 383 RMV-DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY---------- 431

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
              +  E        + + PN  T G +V G CK   ++ A   L  M      PN +V+
Sbjct: 432 ---FPCE------DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 482

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           ++LI GF      D   +    M + G  P V T+++++D     G +    ++   M+K
Sbjct: 483 DALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 542

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
               P++  ++ +  G  R GE +KA  +L+ M + G  PNVV +T +I G   A K+  
Sbjct: 543 DSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDL 602

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE----KGVRPKKSTIQ 419
           ++ ++ +M   G +PN  TY  L+     A    +A  LL  M++    K ++  +  IQ
Sbjct: 603 SLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQ 662

Query: 420 LVADSWRA-IGLARE 433
             + S+ A +G+  E
Sbjct: 663 GFSKSFIASLGILEE 677



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/468 (23%), Positives = 203/468 (43%), Gaps = 50/468 (10%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +  L    K  +A  +F  +   G  P + TYT L+ +  +    +    L  ++   G 
Sbjct: 295 ITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGC 354

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEE 117
            P  + + A+I+A  ++  V +A  IF +M D+GC+P   TY  L+ G    GN+ K  E
Sbjct: 355 SPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFE 414

Query: 118 SLKLL-----------QLMSQDKN-VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
               L               +D++ + PN  TY  LV   C  + ++ A  ++  M++SG
Sbjct: 415 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG 474

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
            +P+ + Y+ L   + + G+   A+++  +M      P+  T   ++    K+G ++ AM
Sbjct: 475 CEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 534

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           + L +M +    PN+V + ++I G   I +S+   K L+LMEE G  P+VVT++ ++D  
Sbjct: 535 KVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 594

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE--------------- 330
             AG +    ++F  M + G  P+   + +L      AG   KA                
Sbjct: 595 GKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYL 654

Query: 331 ------------------SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
                              IL  M  YG  P   ++  +I  +  A +++ AM ++++M 
Sbjct: 655 QGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMM 714

Query: 373 EI--GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
           E+   +  +   Y +L+     A Q   A  L   M  +G  P+ S  
Sbjct: 715 EVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVF 762



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 188/442 (42%), Gaps = 32/442 (7%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E G      T      AL ++ R+   L +I   E++  K D++L   MI+   E+   D
Sbjct: 68  ESGFCMDRFTVGCFAHALCKEGRWADALDMI---EREDFKLDTVLCTHMISGLMEASYFD 124

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           EAM    +M+ + C P   TY TL+ G+    +     +++ +M   +   PN   +N L
Sbjct: 125 EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMM-MTEGCNPNPSLFNSL 183

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR------AEQMLFE 195
           V ++C++     A+ ++ +M   G  P  V YN    +     +         AE++  E
Sbjct: 184 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGE 243

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M       N+          C  G  + A + +  M      P+   ++ +I  FL    
Sbjct: 244 MLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT-FL--CH 300

Query: 256 SDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +  V+KA  L +E    GV PDV T++ ++D++  AGL+ + Q +F++M   G  P +  
Sbjct: 301 ATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVT 360

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM- 371
           ++ L   Y++A +  +A  I   M   G  PN V +  ++ G C A  + +A  +Y K+ 
Sbjct: 361 YTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI 420

Query: 372 -------------CE--IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
                        CE    + PN+ TY  L+ G  +A +   A ELL  M   G  P   
Sbjct: 421 GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHI 480

Query: 417 TIQLVADSWRAIGLAREAKRVL 438
               + D +   G    A+ V 
Sbjct: 481 VYDALIDGFCKAGKIDSAQEVF 502



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/405 (23%), Positives = 185/405 (45%), Gaps = 18/405 (4%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+G     ++ + F C       P ++TY  LV  L +  +      L+  +   G +P+
Sbjct: 419 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 478

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I+++A+I+   ++G +D A ++F +M   G  P+  TY +LI      G+ + ++K+L 
Sbjct: 479 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 538

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +D +  PN  TY  ++   C     E+A  ++  M   G  P+ VTY  L     + 
Sbjct: 539 QMLKD-SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKA 597

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   +  +  +M      PN  T  ++++  C  G ++ A   L  MK+      L  +
Sbjct: 598 GKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGY 657

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
              I+GF     S     +L ++EE   +G  P    +  ++D +S AG +    E+  +
Sbjct: 658 RCAIQGF-----SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKE 712

Query: 301 M--VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           M  V + ++ D  +++ L +    A + ++A  + + M + G  P + +F  +I G    
Sbjct: 713 MMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEV 772

Query: 359 VKMQRAMSIYEKMC-EIGINPN------LKTYETLLWGYGEAKQP 396
            K   A+ +   +C E+G+  +      L T+  ++ GYG+  +P
Sbjct: 773 KKWDEALQLCYGICHEVGLLLSYTTQIFLFTFVVIVVGYGKNIEP 817



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/413 (22%), Positives = 172/413 (41%), Gaps = 25/413 (6%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G +P  + +NA++   S +G VD   ++ ++M +SG      T           G+  ++
Sbjct: 35  GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           L ++    + ++ K +      ++      +  +EA + +++M  +   P+ VTY TL  
Sbjct: 95  LDMI----EREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            + +  +    ++++  M      PN      +V  YC E +   A + L RM      P
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210

Query: 239 NLVVFNSLIKGFL---DIKDSDGVDKALTLMEEFGVKPDV---VTFSTIMDAWSSAGLMG 292
             VV+N  I        +   D +D A  +  E      V   V  +         G   
Sbjct: 211 GYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFD 270

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           K  ++  +M++ G  PD   +S +      A + +KA  +   M+  GV P+V  +T +I
Sbjct: 271 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILI 330

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
             +C A  +++A  ++E+M  +G +P + TY  L+  Y +AKQ  +A ++   M + G R
Sbjct: 331 DSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCR 390

Query: 413 PKKSTIQLVADSW--------------RAIGLAREAKRVLKSAEEDRQSM-PN 450
           P   T   + D                + IG +  A        EDR ++ PN
Sbjct: 391 PNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 443



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/412 (20%), Positives = 165/412 (40%), Gaps = 53/412 (12%)

Query: 113 GKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT 172
           G  E+ LK       D   +P+  TYN LV+   S   ++  + V  +M  SG   D  T
Sbjct: 25  GDSEDPLK-------DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFT 77

Query: 173 YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMK 232
               A A  + G    A  M+   +    + +   C  ++SG  +    ++AM FL+RM+
Sbjct: 78  VGCFAHALCKEGRWADALDMI---EREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMR 134

Query: 233 ELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMG 292
                PN+V + +L+ GFL  K      + + +M   G  P+   F++++ ++ +     
Sbjct: 135 CNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYA 194

Query: 293 KCQEIFDDMVKAGIEPDIHVFSI------------------------------------- 315
              ++ + M   G  P   V++I                                     
Sbjct: 195 YAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKV 254

Query: 316 ----LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
                A+     G+  KA  ++  M + G  P+   ++ VI+  C+A K+++A  ++++M
Sbjct: 255 NVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM 314

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
             +G+ P++ TY  L+  + +A    +A+ L + M   G  P   T   +  ++      
Sbjct: 315 KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 374

Query: 432 REAKRVLKSAEEDRQSMPNKKDEIA-VESIHRKQNLSASNSTFLQIPGVVSS 482
            +A  +      D    PN     A V+ + +  N+S +   + ++ G   S
Sbjct: 375 PQANDIFHRM-VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDS 425


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/448 (24%), Positives = 213/448 (47%), Gaps = 10/448 (2%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
            G  P + T+  L+             S+++K+ K G +PD+I FN +I     +G V E
Sbjct: 97  HGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKE 156

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+     +   G      +Y TLI G   +G+   +L++L+ +   K VK N   YN ++
Sbjct: 157 ALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKID-GKLVKINVVMYNTII 215

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
            + C    + +A+ +  +M+A  I PD VT++ L   +   G+   A  +  EM    + 
Sbjct: 216 DSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNIN 275

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+  T  I+V   CKEGN++ A   L  M +  V PN+V ++SL+ G+  +   +     
Sbjct: 276 PDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHV 335

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           L  + + G  P+  ++ T+++ +    ++ +   +F+DM   GI PD   ++ L  G  +
Sbjct: 336 LNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCK 395

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           +G    A  ++  M   G   N+  +  +I   C    + +A+++ +K+ + GI P++ T
Sbjct: 396 SGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYT 455

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           +  L++G  +  +   A+++ Q +  KG      T  ++ +     GL  EA+ +L S  
Sbjct: 456 FNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALL-SKM 514

Query: 443 EDRQSMPNKKDEIAVESI-----HRKQN 465
           +D   +P   D +  E++     H+ +N
Sbjct: 515 DDNGIIP---DAVTYETLIQALFHKDEN 539



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 210/421 (49%), Gaps = 7/421 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK  EA +  + ++  G      +Y TL+  L +    ++ L ++ K++   +K +
Sbjct: 148 LCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKIN 207

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++N +I++  +   V +A +++ +M      P   T++ LI G+  VG+ EE+  L +
Sbjct: 208 VVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFR 267

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   KN+ P+  T+NILV A C + +++ A N++  M+  G+ P+ VTY++L   Y   
Sbjct: 268 EMVL-KNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLV 326

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +  +A+ +L  +      PN  +   +++G+CK   +++A+     M+   + P+ V +
Sbjct: 327 NQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTY 386

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           NSLI G   +  S  +  A  L++E    G   ++ T++ ++DA      + +   +   
Sbjct: 387 NSLIDG---LCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKK 443

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +   GI+PD++ F+IL  G  + G  + A+ +   +   G   N   +  +++G C    
Sbjct: 444 IKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGL 503

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
              A ++  KM + GI P+  TYETL+       +  +AE+LL+ M  + V      +++
Sbjct: 504 FDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVVYALEGLEM 563

Query: 421 V 421
           V
Sbjct: 564 V 564



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/335 (23%), Positives = 145/335 (43%), Gaps = 35/335 (10%)

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           + N    A ++  ++   GI PD  T+N L   Y    E   A  M+ ++      P+  
Sbjct: 80  NNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTI 139

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS---------- 256
           T   ++ G C  G +++A+ F   +  L  H +   + +LI G   I ++          
Sbjct: 140 TFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKI 199

Query: 257 ----------------DGVDKALTLMEEF---------GVKPDVVTFSTIMDAWSSAGLM 291
                           D + K   +++ +          + PDVVTFS ++  +   G +
Sbjct: 200 DGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQL 259

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            +   +F +MV   I PD + F+IL     + G  + A+++L  M K GV PNVV ++++
Sbjct: 260 EEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSL 319

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           + G+C   ++ +A  +   + ++G  PN  +Y T++ G+ + K    A  L   M+ KG+
Sbjct: 320 MDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGI 379

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
            P K T   + D     G    A  ++    ++ Q
Sbjct: 380 APDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQ 414


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 201/425 (47%), Gaps = 36/425 (8%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G R     Y   + A  + +  K  +  +  + K G++P+  ++N +I        + +A
Sbjct: 171 GFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDA 230

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            K+F +M +     +  TYNTLI GY  VG+ + + K+ + M ++K+V PN  T+N L+ 
Sbjct: 231 EKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERM-KEKSVAPNIITFNSLLS 289

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL--------------------------- 176
             C    ++EA +++ +M  +G  PD  TY+ L                           
Sbjct: 290 GLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRI 349

Query: 177 --------ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
                        + G+  +AE++L +   N +  +E      V+GYC+ G+M  A+  +
Sbjct: 350 NNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTI 409

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
            RM+   + PN + FNSLI  F D+K+ D  ++ +  M E GV P V T++T++D +   
Sbjct: 410 ERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKL 469

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
               +C +I + M + G++P++  +  L     + G+  +AE +L  M   GV PN  ++
Sbjct: 470 CTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVY 529

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
             +I G C   K++ A+  +++M    I+P L TY  L+ G  +  +   AE+ L  +  
Sbjct: 530 NMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITS 589

Query: 409 KGVRP 413
            G  P
Sbjct: 590 SGHSP 594



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 202/419 (48%), Gaps = 8/419 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +GK  +A  I     E G     + Y T V    R       +  I ++E  G+
Sbjct: 358 LNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGL 417

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+SI FN++I+   +   +D+A +  +KM + G  P+  TYNTLI GYG +   +   +
Sbjct: 418 RPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQ 477

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+ M ++  VKPN  +Y  L+   C    I EA  V+  M+  G+ P+A  YN L    
Sbjct: 478 ILEQM-EEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGS 536

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G+   A +   EM  +++ P   T  +++ G CK+G + +A  FL ++      P++
Sbjct: 537 CMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDV 596

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           + +NSLI G+    ++  V K L L   M+  G+KP V T+  ++   S  G+    +++
Sbjct: 597 ITYNSLISGY---ANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGI-ELVEKL 652

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           +++M++  + PD  V++ +   Y   G  QKA S+   M   G+HP+ + + ++I G   
Sbjct: 653 YNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFR 712

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
             K+     +   M    + P   TY+ L+ G+ + K    A    + M E    P  S
Sbjct: 713 EGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNAS 771



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 211/401 (52%), Gaps = 2/401 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E+G R    T + L+  L +Q + +    ++ K  ++G+  D +++N  +N     G+++
Sbjct: 344 EKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMN 403

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +A+   ++M+  G +P + T+N+LI  + ++ + +++ + ++ M++ K V P+  TYN L
Sbjct: 404 KAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAE-KGVTPSVETYNTL 462

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +  +    + +  + ++ +M   G++P+ V+Y +L     + G+   AE +L +M    V
Sbjct: 463 IDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGV 522

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            PN +   +++ G C  G ++DA+RF   M   E+ P LV +N LI G          + 
Sbjct: 523 LPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAED 582

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            LT +   G  PDV+T+++++  +++AG + KC  +++ M   GI+P +  +  L  G  
Sbjct: 583 FLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCS 642

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           + G  +  E +   M +  + P+ V++  +I  +      Q+A S+++ M + GI+P+  
Sbjct: 643 KEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKM 701

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
           TY +L+ G+    +    ++L+  M+ K + PK  T  ++ 
Sbjct: 702 TYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILV 742



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/428 (24%), Positives = 200/428 (46%), Gaps = 34/428 (7%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G RP +  Y  L+  L R+KR +    +  ++    +    + +N +I+   + G +D A
Sbjct: 206 GVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAA 265

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM------------------ 125
            K+ ++MK+    P   T+N+L+ G   + K +E+  LL+ M                  
Sbjct: 266 FKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDG 325

Query: 126 ----------------SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
                           + +K ++ N+ T +IL+   C +  +E+A  ++ K   +G+  D
Sbjct: 326 LLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVAD 385

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
            V YNT    Y + G+  +A   +  M++  +RPN  T   ++  +C    M+ A  ++ 
Sbjct: 386 EVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVK 445

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
           +M E  V P++  +N+LI G+  +   D   + L  MEE GVKP+VV++ ++++     G
Sbjct: 446 KMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDG 505

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
            + + + +  DM+  G+ P+  V+++L  G    G+ + A      M +  + P +V + 
Sbjct: 506 KILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYN 565

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
            +I G C   K+  A     ++   G +P++ TY +L+ GY  A    +   L + M+  
Sbjct: 566 VLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNL 625

Query: 410 GVRPKKST 417
           G++P   T
Sbjct: 626 GIKPTVRT 633



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 181/401 (45%), Gaps = 42/401 (10%)

Query: 42  QKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTST 101
           +K+F  ++ L  ++E  G + D+ ++   I A  +  N+   M+    M+  G       
Sbjct: 154 EKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRG------- 206

Query: 102 YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
                                        V+PN   YN+L+   C +  I +A  +  +M
Sbjct: 207 -----------------------------VRPNVFIYNVLIGGLCREKRIRDAEKMFDEM 237

Query: 162 VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM 221
               +    VTYNTL   Y + GE   A +M   M+   V PN  T   ++SG CK   M
Sbjct: 238 CNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKM 297

Query: 222 EDAMRFLYRMKELEVH---PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTF 278
           ++A   L   KE+EV+   P+   ++ L  G L   D +G  +      E G++ +  T 
Sbjct: 298 KEARSLL---KEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTG 354

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           S +++     G + K +EI     + G+  D  +++    GY R G+  KA   +  M  
Sbjct: 355 SILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMES 414

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
           +G+ PN + F ++I  +C+  +M +A    +KM E G+ P+++TY TL+ GYG+     R
Sbjct: 415 FGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDR 474

Query: 399 AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             ++L+ MEE GV+P   +   + +     G   EA+ VL+
Sbjct: 475 CFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLR 515



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 182/380 (47%), Gaps = 5/380 (1%)

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
           L + +++ C +S  + EA+++++ M+  G  P+  + + L     N    ++ +K++ L 
Sbjct: 108 LSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVN---EKQFVKVVDLF 164

Query: 126 SQDKN--VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            + +N   + +   Y   ++A     +++     +  M   G++P+   YN L     + 
Sbjct: 165 MEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCRE 224

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                AE+M  EM N  +  +  T   ++ GYCK G ++ A +   RMKE  V PN++ F
Sbjct: 225 KRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITF 284

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           NSL+ G   ++        L  ME  G  PD  T+S + D            E+++   +
Sbjct: 285 NSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATE 344

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GI  + +  SIL  G  + G+ +KAE IL    + G+  + V++ T ++G+C    M +
Sbjct: 345 KGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNK 404

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+   E+M   G+ PN  T+ +L+  + + K+  +AEE ++ M EKGV P   T   + D
Sbjct: 405 AILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLID 464

Query: 424 SWRAIGLAREAKRVLKSAEE 443
            +  +       ++L+  EE
Sbjct: 465 GYGKLCTFDRCFQILEQMEE 484



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 138/306 (45%), Gaps = 2/306 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  EA  +   +I  G  P    Y  L+       + K  L    ++ +  +
Sbjct: 498 INCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEI 557

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + +N +I+   + G + EA     ++  SG  P   TYN+LI GY N G   + L 
Sbjct: 558 SPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLG 617

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M ++  +KP  RTY+ L+ + CSK  IE    +  +M+   + PD V YN +   Y
Sbjct: 618 LYETM-KNLGIKPTVRTYHPLI-SGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCY 675

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+ G T +A  +   M +  + P++ T   ++ G+ +EG + +    +  MK  E+ P  
Sbjct: 676 AEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKA 735

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             ++ L+KG  D+KD  G       M E    P+    + +       G + + Q I  +
Sbjct: 736 DTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSE 795

Query: 301 MVKAGI 306
           M   GI
Sbjct: 796 MNVKGI 801



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 86/182 (47%)

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           L  M + GV+P+V  ++ ++        +   +++FD+M    +   I  ++ L  GY +
Sbjct: 199 LDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCK 258

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            GE   A  +   M++  V PN++ F +++SG C   KM+ A S+ ++M   G  P+  T
Sbjct: 259 VGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYT 318

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           Y  L  G         A EL +   EKG+R    T  ++ +     G   +A+ +LK   
Sbjct: 319 YSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFT 378

Query: 443 ED 444
           E+
Sbjct: 379 EN 380


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 202/439 (46%), Gaps = 37/439 (8%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A + FN +I +   P ++ +  L++AL R K + ++LSL  ++E   ++ D   FN +I
Sbjct: 67  DALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILI 126

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N  S    VD A  +  K+   G +P   T+++L                          
Sbjct: 127 NCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSL-------------------------- 160

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
                     +   C ++    A     +MVASG QP+  TYNT+ + + + G+T  A  
Sbjct: 161 ----------INGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVG 210

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L +M     RP+      I+ G CK+  + +A+     +K   V P++  ++ L+ G  
Sbjct: 211 LLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLC 270

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
           +    +        M    + PDVVTF+ ++D     G++ + Q I   M++ G+EP+  
Sbjct: 271 NSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYA 330

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++ L  GY    +  +A  +  +M   G  PNVV +  +I+G+C A ++  A  ++++M
Sbjct: 331 TYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEM 390

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
              G+ PN   Y TL+ G  +A +   A EL + M+ +G  P   T  ++ DS   +G  
Sbjct: 391 SFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYL 450

Query: 432 REAKRVLKSAEEDRQSMPN 450
             A R+ + A +D    PN
Sbjct: 451 DNALRLFR-AMQDSCLKPN 468



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 159/325 (48%), Gaps = 1/325 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  + K   A   F+ ++  G++P L TY T++    +  +    + L+ K++K G 
Sbjct: 161 INGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGG 220

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD +++N +I+   +   V EA+ IF ++K  G +P   TY+ L+ G  N  + EE+  
Sbjct: 221 RPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASA 280

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M    N+ P+  T+NILV   C +  + EA  ++  M+  G++P+  TYN+L   Y
Sbjct: 281 LFNEM-MSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGY 339

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
               + + A  +   M      PN  +  I+++GYCK   +++A      M    + PN 
Sbjct: 340 CLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNT 399

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +N+LI G           +    M+  G  PD+VT + ++D+    G +     +F  
Sbjct: 400 FNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRA 459

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGE 325
           M  + ++P++  + IL +   ++G+
Sbjct: 460 MQDSCLKPNLVTYDILIRAMYKSGK 484



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 105/259 (40%), Gaps = 35/259 (13%)

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C   N+EDA+     M      P +V F+ L+   + IK    V      +E   ++ DV
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD-------------------------- 309
             F+ +++ +S    +     +   ++K G EPD                          
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 310 ---------IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
                    +H ++ + KG+ + G+   A  +L  M K G  P++V++ T+I G C    
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A+ I+ ++   G+ P++ TY  L+ G   + Q   A  L   M    + P   T  +
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 421 VADSWRAIGLAREAKRVLK 439
           + D     G+  EA+ ++K
Sbjct: 300 LVDKLCKEGMLSEAQGIIK 318


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 186/379 (49%), Gaps = 13/379 (3%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKD-GMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           TY  LV A       ++ + L+ ++E+  GM P   ++N  ++A  +SG V EAM++ + 
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           MKD  CKP   T+NTLI G    G+ +E+ ++L  M +      N  TYN L+    S  
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMER-SGFAANLVTYNTLINGLSSAG 138

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM-QNNQVRPNERTC 208
              EA  V+  M  +   PD  TYN +   + + GE  RA   L EM Q     P+  T 
Sbjct: 139 RSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTY 195

Query: 209 GIIVSGYCKEGNMEDAMRFLYRM-KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
            I+++G CK  N+  A   L  M    +   ++V FN+L+ G+   +D D   + L+ M 
Sbjct: 196 SILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSML 255

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
           E G  PDVVT+STI+D     G + K   + + MV  G +PD+  +++L  G  +AG+  
Sbjct: 256 EHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMV 315

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           +A  ++  M + G  PN V ++ V  G C   K+  A  +   + + G   ++  +E LL
Sbjct: 316 EACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375

Query: 388 WGYGE------AKQPWRAE 400
               +      A Q W+ E
Sbjct: 376 LSVKKRLLDRAAFQKWKLE 394



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 177/354 (50%), Gaps = 13/354 (3%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDS-GCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           D+  +  ++ A   +G +  AM + ++M+   G  PT S YN  +      GK  E++++
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           ++ M +D   KP+  T+N L+   C    ++EA  V+ +M  SG   + VTYNTL    +
Sbjct: 77  VKNM-KDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLS 135

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHPNL 240
             G   R+ + +  MQ     P+ +T   I+ G+CK G ++ A  FL  MK+     P+ 
Sbjct: 136 SAG---RSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDT 192

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD----VVTFSTIMDAWSSAGLMGKCQE 296
             ++ LI G      S  + KA  L++E   + D    VV F+T++D +  A  + + +E
Sbjct: 193 FTYSILINGLCK---SSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARE 249

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +   M++ G  PD+  +S +  G  R G+  K  ++L  M   G  P+VV +T +++G C
Sbjct: 250 LLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLC 309

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
            A KM  A  + ++M E G  PN  TY  +  G  +  +   A +LL  + +KG
Sbjct: 310 KAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKG 363



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 164/348 (47%), Gaps = 11/348 (3%)

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
           TY  L++ +   G+ + ++ LL+ M Q   + P    YN  V A C    + EA  VV  
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           M     +PD VT+NTL     + G    A+Q+L EM+ +    N  T   +++G    G 
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF----GVKPDVV 276
             +A+     M+ +   P+   +N++I GF     S  +D+A   +EE     G  PD  
Sbjct: 140 SGEAVLV---MQGMTTTPDTQTYNAIIHGFCK---SGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMV-KAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           T+S +++    +  + K  E+  +M+ +      +  F+ L  GY +A +  +A  +L+S
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M ++G  P+VV ++T+I G C    + +  ++ EKM   G  P++ TY  L+ G  +A +
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
              A  L++ M E G  P   T  LV D    I     A  +L S  +
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRD 361



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 152/314 (48%), Gaps = 6/314 (1%)

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVAS-GIQPDAVTYNTLARAYAQYGETYRAEQM 192
           ++ TY +LVRA C    ++ A +++ +M    G+ P    YN    A  + G+   A ++
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           +  M++   +P+  T   +++G CK G +++A + L  M+      NLV +N+LI G   
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM-VKAGIEPDIH 311
              S    +A+ +M+     PD  T++ I+  +  +G + +     ++M  +AG  PD  
Sbjct: 137 AGRSG---EAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 312 VFSILAKGYVRAGEPQKAESILTSM-RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
            +SIL  G  ++   +KA+ +L  M  +     +VV F T++ G+C A  + RA  +   
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M E G  P++ TY T++ G        +   LL+ M  +G +P   T  ++       G 
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313

Query: 431 AREAKRVLKSAEED 444
             EA R++K   ED
Sbjct: 314 MVEACRLVKRMLED 327



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 135/280 (48%), Gaps = 4/280 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  EA  + + +   G    L+TY TL+  L+   R    + ++  +      PD
Sbjct: 99  LCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTT---TPD 155

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKD-SGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           +  +NA+I+   +SG +D A    ++MK  +GC P T TY+ LI G        ++ +LL
Sbjct: 156 TQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELL 215

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           Q M   K+   +   +N LV  +C    ++ A  ++  M+  G  PD VTY+T+     +
Sbjct: 216 QEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCR 275

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+  +   +L +M +   +P+  T  ++V+G CK G M +A R + RM E    PN V 
Sbjct: 276 CGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVT 335

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIM 282
           ++ +  G   I   D  +  LT + + G   DVV F  ++
Sbjct: 336 YSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 102/436 (23%), Positives = 218/436 (50%), Gaps = 4/436 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
            F+ ++  G  P L+T++TL+    ++ R     SL + + + G+ PD ++++ +IN   
Sbjct: 262 FFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLF 321

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
            +G ++E   +F      G K     +++++  Y  VG   +++++   M ++  + PN 
Sbjct: 322 RAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKE-GISPNV 380

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY+IL+   C    + EA  V  +++  G++P  +TY++L   + +  E  R    L+ 
Sbjct: 381 VTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCK-SENLRDGFGLYG 439

Query: 196 -MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
            M      P+   C ++++G  ++G M++A+RF ++  +  +  N  +FN+LI G   +K
Sbjct: 440 IMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLK 499

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
            +    K   LM  + V PDVVT++ ++   +  G + +   +F  ++K G  PD  ++ 
Sbjct: 500 RTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYC 559

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            L  G+ +  +P     I   M+  G+ P++ ++  +I+ +     ++  + +  ++ + 
Sbjct: 560 TLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKY 619

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G+ P++ TY T++ GY   K   +A +L +V++    +P   T  ++ D++   G   +A
Sbjct: 620 GLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDA 679

Query: 435 KRVLKSAEEDRQSMPN 450
             +  S  E R   PN
Sbjct: 680 MLIFSSMLE-RGPEPN 694



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 205/415 (49%), Gaps = 5/415 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EA  +F  ++++G  P+++TY++L+    + +  +    L   + + G 
Sbjct: 387 INGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGH 446

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD ++ + +IN  S  G +DEA++ F +    G       +N LI G   + +  + LK
Sbjct: 447 VPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLK 506

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +  LM   K V P+  TY +LV+    +  ++EA  + ++++  G  PD + Y TL   +
Sbjct: 507 MYILMGMYK-VIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF 565

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +     Q+   MQ+N + P+     ++++ + +EG +E+ +  L  + +  + P++
Sbjct: 566 CKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDI 625

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N++I G+  +K      K   +++    +P+ +TF+ ++DA+   G M     IF  
Sbjct: 626 VTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSS 685

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M++ G EP+I  +S L  GY +    + A  +   M    V PN+V ++ +I G C    
Sbjct: 686 MLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGL 745

Query: 361 MQRAMSIYEKMCEIG--INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           M+ A   ++  C IG  + P++  Y  L+ GY +  +   A  L   M   G+ P
Sbjct: 746 MEEASLAFQ--CAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMP 798



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/486 (23%), Positives = 224/486 (46%), Gaps = 39/486 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+   + +  EA  ++N +IE+G  P L+ Y+ L+  L R  + +   SL S     G+
Sbjct: 282 INVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGV 341

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K D ++F+++++A    G++ +A++++ +M   G  P   TY+ LI G    G+  E+  
Sbjct: 342 KMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACG 401

Query: 121 LL-QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +  Q++ Q   ++P+  TY+ L+  +C   ++ + + +   M+  G  PD V  + L   
Sbjct: 402 VFGQILKQ--GLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLING 459

Query: 180 YAQYGETYRAEQMLFE-----------------------------------MQNNQVRPN 204
            ++ G    A +  F+                                   M   +V P+
Sbjct: 460 LSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPD 519

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T  ++V G  ++G +++A+   +++ +    P+ +++ +LI GF   +D     +   
Sbjct: 520 VVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFK 579

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
           LM+  G+ PD+  ++ +++ +   G +    E+  +++K G+EPDI  ++ +  GY    
Sbjct: 580 LMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLK 639

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              KA  +   ++     PN + FT +I  +C   +M  AM I+  M E G  PN+ TY 
Sbjct: 640 IFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYS 699

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
            L+ GY + +    A EL + M    V P   +  ++ D     GL  EA    + A   
Sbjct: 700 CLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCA-IG 758

Query: 445 RQSMPN 450
           R  +P+
Sbjct: 759 RHLLPD 764



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 168/364 (46%), Gaps = 36/364 (9%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINAC- 74
           ++  ++ +GH P ++  + L+  L+RQ      L    +  K G+  ++ LFNA+I+ C 
Sbjct: 437 LYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCF 496

Query: 75  ----------------------------------SESGNVDEAMKIFQKMKDSGCKPTTS 100
                                             +E G +DEA+ +F ++   G  P   
Sbjct: 497 RLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHI 556

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
            Y TLI G+     P   L++ +LM Q   + P+   YN+L+  +  +  +E    ++ +
Sbjct: 557 IYCTLIDGFCKKRDPATGLQIFKLM-QSNGIFPDICIYNVLINMFFREGCVENVLELLRE 615

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           ++  G++PD VTYNT+   Y       +A ++   ++  + +PN  T  I++  YCK+G 
Sbjct: 616 IIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGR 675

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           M+DAM     M E    PN++ ++ LI G+   ++++   +    M    V P++V++S 
Sbjct: 676 MDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSI 735

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++D     GLM +    F   +   + PD+  + IL +GY + G   +A  +   M   G
Sbjct: 736 LIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNG 795

Query: 341 VHPN 344
           + P+
Sbjct: 796 IMPD 799



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 88/401 (21%), Positives = 174/401 (43%), Gaps = 10/401 (2%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P + +F+ M+    + GN++   +     ++ G  P+T  Y+ L+  Y   G  + ++  
Sbjct: 107 PATRVFDRMV---GQFGNLEVLGEFHGSFRNYGSNPST-VYSFLLHCYCRNGMVDRAVDT 162

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
              MS+   V  +    + ++      + I+      Y+ +  G+      Y  +  ++ 
Sbjct: 163 FAWMSK-MGVSISHYAASEMLDLLIDSDRIDVILEN-YEEMCKGLG----VYEFVFNSFL 216

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           + GE  +       +    + P    C  I+ G C    +  A  F   M      PNLV
Sbjct: 217 KRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLV 276

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            F++LI  +      D       LM E G+ PD+V +S +++    AG + +   +F   
Sbjct: 277 TFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMA 336

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           +  G++ D+ +FS +   YVR G+  KA  + T M K G+ PNVV ++ +I+G C   ++
Sbjct: 337 LARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRV 396

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             A  ++ ++ + G+ P++ TY +L+ G+ +++       L  +M  KG  P      ++
Sbjct: 397 LEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSML 456

Query: 422 ADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHR 462
            +     G+  EA R    A +   ++ N      ++   R
Sbjct: 457 INGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFR 497



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 1/186 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +I+ G  P ++TY T++      K F   + L   ++    +P++I F  +I+A  + G 
Sbjct: 616 IIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGR 675

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D+AM IF  M + G +P   TY+ LI GY      E + +L + M  D+ V PN  +Y+
Sbjct: 676 MDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDR-VSPNIVSYS 734

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           IL+   C K  +EEA       +   + PD + Y  L R Y + G    A  +   M  N
Sbjct: 735 ILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVN 794

Query: 200 QVRPNE 205
            + P++
Sbjct: 795 GIMPDD 800



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/411 (20%), Positives = 176/411 (42%), Gaps = 7/411 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P+ + Y+ L+    R       +   + + K G+       + M++   +S  +D  
Sbjct: 136 GSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVI 194

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           ++ +++M    CK     Y  +   +   G+ E+ L   + + + + + P     N +++
Sbjct: 195 LENYEEM----CK-GLGVYEFVFNSFLKRGEVEKGLNFHRALVE-RGLVPKIVDCNKILK 248

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C  N I  A +    MV SG  P+ VT++TL   Y +      A  +   M    + P
Sbjct: 249 GLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVP 308

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +     I+++G  + G +E+            V  ++V+F+S++  ++ + D     +  
Sbjct: 309 DLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVY 368

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           T M + G+ P+VVT+S +++     G + +   +F  ++K G+EP +  +S L  G+ ++
Sbjct: 369 TRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKS 428

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
              +    +   M + G  P+VV+ + +I+G      M  A+  + +  + G+  N   +
Sbjct: 429 ENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLF 488

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
             L+ G    K+     ++  +M    V P   T  ++       G   EA
Sbjct: 489 NALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEA 539


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 212/407 (52%), Gaps = 12/407 (2%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G++ + ++   L+ AL ++ R   +  +  ++ +  ++P+   FN +INA  ++G +++A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
             + + MK  GC P   +YNTLI GY   G  GK  ++  +L+ M ++ +V PN  T+NI
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEN-DVSPNLTTFNI 301

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+  +   +++  +  V  +M+   ++P+ ++YN+L       G+   A  M  +M +  
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           V+PN  T   +++G+CK   +++A+     +K     P   ++N LI  +  +     +D
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK---ID 418

Query: 261 KALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
               L EE    G+ PDV T++ ++      G +   +++FD +   G+ PD+  F IL 
Sbjct: 419 DGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILM 477

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM-CEIGI 376
           +GY R GE +KA  +L  M K G+ P  + +  V+ G+C    ++ A ++  +M  E  +
Sbjct: 478 EGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRL 537

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
             N+ +Y  LL GY +  +   A  LL  M EKG+ P + T ++V +
Sbjct: 538 RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKE 584



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 173/324 (53%), Gaps = 10/324 (3%)

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG---E 185
           + ++PN  T+N+++ A C    + +A +V+  M   G  P+ V+YNTL   Y + G   +
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGK 276

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
            Y+A+ +L EM  N V PN  T  I++ G+ K+ N+  +M+    M + +V PN++ +NS
Sbjct: 277 MYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNS 336

Query: 246 LIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           LI G  +      + +A+++ ++    GV+P+++T++ +++ +    ++ +  ++F  + 
Sbjct: 337 LINGLCN---GGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G  P   ++++L   Y + G+     ++   M + G+ P+V  +  +I+G C    ++
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A  +++++   G+ P+L T+  L+ GY    +  +A  LL+ M + G++P+  T  +V 
Sbjct: 454 AAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVM 512

Query: 423 DSWRAIGLAREAKRVLKSAEEDRQ 446
             +   G  + A  +    E++R+
Sbjct: 513 KGYCKEGNLKAATNMRTQMEKERR 536



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 158/306 (51%), Gaps = 21/306 (6%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  ++++  +P +I+Y +L+  L    +    +S+  K+   G++P+ I +NA+IN   
Sbjct: 318 VFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFC 377

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           ++  + EA+ +F  +K  G  PTT  YN LI  Y  +GK ++   L + M ++  + P+ 
Sbjct: 378 KNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMERE-GIVPDV 436

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TYN L+   C   +IE A  +  ++ + G+ PD VT++ L   Y + GE+ +A  +L E
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKE 495

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM-KELEVHPNLVVFNSLIKGFLDIK 254
           M    ++P   T  I++ GYCKEGN++ A     +M KE  +  N+  +N L++G+    
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI--HV 312
             +  +  L  M E G+ P+ +T+  +                 ++MV  G  PDI  H+
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITYEIVK----------------EEMVDQGFVPDIEGHL 599

Query: 313 FSILAK 318
           F++  K
Sbjct: 600 FNVSTK 605



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 175/356 (49%), Gaps = 8/356 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTR----QKRFKSILSLISKVE 56
           +N L   GK ++A  +   +   G  P +++Y TL+    +     K +K+   L   VE
Sbjct: 230 INALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVE 289

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
            D + P+   FN +I+   +  N+  +MK+F++M D   KP   +YN+LI G  N GK  
Sbjct: 290 ND-VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKIS 348

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           E++ +   M     V+PN  TYN L+  +C  + ++EA ++   +   G  P    YN L
Sbjct: 349 EAISMRDKMVS-AGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNML 407

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
             AY + G+      +  EM+   + P+  T   +++G C+ GN+E A +   ++    +
Sbjct: 408 IDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P+LV F+ L++G+    +S      L  M + G+KP  +T++ +M  +   G +     
Sbjct: 468 -PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATN 526

Query: 297 IFDDMVKA-GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
           +   M K   +  ++  +++L +GY + G+ + A  +L  M + G+ PN + +  V
Sbjct: 527 MRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 154/322 (47%), Gaps = 3/322 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G GK ++A  +   ++E    P L T+  L+    +       + +  ++    +KP+
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I +N++IN     G + EA+ +  KM  +G +P   TYN LI G+      +E+L +  
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            +     V P  R YN+L+ A+C    I++ + +  +M   GI PD  TYN L     + 
Sbjct: 391 SVKGQGAV-PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A + LF+   ++  P+  T  I++ GYC++G    A   L  M ++ + P  + +
Sbjct: 450 GNI-EAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTY 508

Query: 244 NSLIKGFLDIKDSDGVDKALTLME-EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           N ++KG+    +        T ME E  ++ +V +++ ++  +S  G +     + ++M+
Sbjct: 509 NIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568

Query: 303 KAGIEPDIHVFSILAKGYVRAG 324
           + G+ P+   + I+ +  V  G
Sbjct: 569 EKGLVPNRITYEIVKEEMVDQG 590



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 148/302 (49%), Gaps = 4/302 (1%)

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+ A   +N   +   V  +M+   IQP+  T+N +  A  + G+  +A  ++ +M+   
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 201 VRPNERTCGIIVSGYCK---EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
             PN  +   ++ GYCK    G M  A   L  M E +V PNL  FN LI GF    +  
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
           G  K    M +  VKP+V++++++++   + G + +   + D MV AG++P++  ++ L 
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            G+ +    ++A  +  S++  G  P   M+  +I  +C   K+    ++ E+M   GI 
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           P++ TY  L+ G         A++L   +  KG+ P   T  ++ + +   G +R+A  +
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAML 492

Query: 438 LK 439
           LK
Sbjct: 493 LK 494



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/322 (22%), Positives = 148/322 (45%), Gaps = 5/322 (1%)

Query: 100 STYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVY 159
           S   + + G+   G   +   +   +S   NV  N    ++LV A+ + +  E  +    
Sbjct: 118 SKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFK 177

Query: 160 KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEG 219
           +    G +  A++   L  A  +   +   E +  EM   +++PN  T  ++++  CK G
Sbjct: 178 RSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTG 237

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVV 276
            M  A   +  MK     PN+V +N+LI G+  +  +  + KA  +++E     V P++ 
Sbjct: 238 KMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLT 297

Query: 277 TFSTIMDA-WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           TF+ ++D  W    L G   ++F +M+   ++P++  ++ L  G    G+  +A S+   
Sbjct: 298 TFNILIDGFWKDDNLPGS-MKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDK 356

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M   GV PN++ +  +I+G+C    ++ A+ ++  +   G  P  + Y  L+  Y +  +
Sbjct: 357 MVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK 416

Query: 396 PWRAEELLQVMEEKGVRPKKST 417
                 L + ME +G+ P   T
Sbjct: 417 IDDGFALKEEMEREGIVPDVGT 438


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 205/448 (45%), Gaps = 23/448 (5%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKS--ILSLISKVEKDGMKPDSILFNAM 70
           A+ + N +   G  P  + Y   + ++  Q++  S  +L L  K+  + +  + +L    
Sbjct: 196 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVN 255

Query: 71  INACSES----GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +   +      G  D+A ++ ++M   G  P TSTY+ +I    +  K E++  L Q M 
Sbjct: 256 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 315

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
               V P+  TY IL+ ++C    IE+A  +  +M + G  P  VTY  L  AY +  + 
Sbjct: 316 M-VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 374

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM--------------- 231
            +A  +   M +   RPN+ T G +V G CK GN+  A     ++               
Sbjct: 375 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC 434

Query: 232 -KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
                + PN+V + +L+ G       D   + L  M   G +P+ + +  ++D +  AG 
Sbjct: 435 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 494

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           +   QE+F  M K G  P +H ++ L     + G    A  +L+ M K    PNVV +T 
Sbjct: 495 IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTA 554

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I G C   + ++A+ +   M E G +PN+ TY  L+ G G+A +   + +L   M  KG
Sbjct: 555 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVL 438
             P   T +++ +   A GL  +A+ +L
Sbjct: 615 CSPNYVTYRVLINHLCAAGLLDKARLLL 642



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/436 (25%), Positives = 200/436 (45%), Gaps = 27/436 (6%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G GK  +A  +   ++ +G  P   TY+ ++  L    + +    L  +++  G+ PD
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +  +I++  ++G +++A  +F++M+  GC PT  TY  LI  Y    +  ++  +  
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D   +PND TY  LV   C   +I +A+ V  K++ +    D+  Y          
Sbjct: 383 RMV-DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY---------- 431

Query: 184 GETYRAEQMLFEMQNNQ-VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                     F  ++   + PN  T G +V G CK   ++ A   L  M      PN +V
Sbjct: 432 ----------FPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIV 481

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +++LI GF      D   +    M + G  P V T+++++D     G +    ++   M+
Sbjct: 482 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 541

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           K    P++  ++ +  G  R GE +KA  +L+ M + G  PNVV +T +I G   A K+ 
Sbjct: 542 KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKID 601

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE----KGVRPKKSTI 418
            ++ ++ +M   G +PN  TY  L+     A    +A  LL  M++    K ++  +  I
Sbjct: 602 LSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAI 661

Query: 419 QLVADSWRA-IGLARE 433
           Q  + S+ A +G+  E
Sbjct: 662 QGFSKSFIASLGILEE 677



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/468 (23%), Positives = 203/468 (43%), Gaps = 50/468 (10%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +  L    K  +A  +F  +   G  P + TYT L+ +  +    +    L  ++   G 
Sbjct: 295 ITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGC 354

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEE 117
            P  + + A+I+A  ++  V +A  IF +M D+GC+P   TY  L+ G    GN+ K  E
Sbjct: 355 SPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFE 414

Query: 118 SLKLL-----------QLMSQDKN-VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
               L               +D++ + PN  TY  LV   C  + ++ A  ++  M++SG
Sbjct: 415 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG 474

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
            +P+ + Y+ L   + + G+   A+++  +M      P+  T   ++    K+G ++ AM
Sbjct: 475 CEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 534

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           + L +M +    PN+V + ++I G   I +S+   K L+LMEE G  P+VVT++ ++D  
Sbjct: 535 KVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 594

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE--------------- 330
             AG +    ++F  M + G  P+   + +L      AG   KA                
Sbjct: 595 GKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYL 654

Query: 331 ------------------SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
                              IL  M  YG  P   ++  +I  +  A +++ AM ++++M 
Sbjct: 655 QGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMM 714

Query: 373 EI--GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
           E+   +  +   Y +L+     A Q   A  L   M  +G  P+ S  
Sbjct: 715 EVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVF 762



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 188/442 (42%), Gaps = 32/442 (7%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E G      T      AL ++ R+   L +I   E++  K D++L   MI+   E+   D
Sbjct: 68  ESGFCMDRFTVGCFAHALCKEGRWADALDMI---EREDFKLDTVLCTHMISGLMEASYFD 124

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           EAM    +M+ + C P   TY TL+ G+    +     +++ +M   +   PN   +N L
Sbjct: 125 EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMM-MTEGCNPNPSLFNSL 183

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR------AEQMLFE 195
           V ++C++     A+ ++ +M   G  P  V YN    +     +         AE++  E
Sbjct: 184 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGE 243

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M       N+          C  G  + A + +  M      P+   ++ +I  FL    
Sbjct: 244 MLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT-FL--CH 300

Query: 256 SDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +  V+KA  L +E    GV PDV T++ ++D++  AGL+ + Q +F++M   G  P +  
Sbjct: 301 ATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVT 360

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM- 371
           ++ L   Y++A +  +A  I   M   G  PN V +  ++ G C A  + +A  +Y K+ 
Sbjct: 361 YTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI 420

Query: 372 -------------CE--IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
                        CE    + PN+ TY  L+ G  +A +   A ELL  M   G  P   
Sbjct: 421 GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHI 480

Query: 417 TIQLVADSWRAIGLAREAKRVL 438
               + D +   G    A+ V 
Sbjct: 481 VYDALIDGFCKAGKIDSAQEVF 502



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/455 (23%), Positives = 191/455 (41%), Gaps = 52/455 (11%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A ++F  +   G  PT++TYT L+ A  + K+      +  ++   G +P+ + +
Sbjct: 337 GLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTY 396

Query: 68  NAMINACSESGNVDEAMKIFQKM---KDSG-------CK------PTTSTYNTLIKGYGN 111
            A+++   ++GN+ +A +++ K+    DS        C+      P   TY  L+ G   
Sbjct: 397 GALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCK 456

Query: 112 VGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAV 171
             K + + +LL  M      +PN   Y+ L+  +C    I+ A  V  +M   G  P   
Sbjct: 457 AHKVDHAHELLDAM-LSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVH 515

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
           TY +L     + G    A ++L +M  +   PN  T   ++ G C+ G  E A++ L  M
Sbjct: 516 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 575

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
           +E    PN+V + +LI G       D      T M   G  P+ VT+  +++   +AGL+
Sbjct: 576 EEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLL 635

Query: 292 GKCQ---------------------------------EIFDDMVKAGIEPDIHVFSILAK 318
            K +                                  I ++M   G  P   V+ +L  
Sbjct: 636 DKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLID 695

Query: 319 GYVRAGEPQKAESILTSMRKY--GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
            + +AG  + A  +   M +    V  +  M+ ++I   C A +++ A  +Y +M   G 
Sbjct: 696 CFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGF 755

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
            P L  +  L+ G  E K+   A +L   +  +GV
Sbjct: 756 VPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 790



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 172/379 (45%), Gaps = 11/379 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+G     ++ + F C       P ++TY  LV  L +  +      L+  +   G +P+
Sbjct: 419 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 478

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I+++A+I+   ++G +D A ++F +M   G  P+  TY +LI      G+ + ++K+L 
Sbjct: 479 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 538

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +D +  PN  TY  ++   C     E+A  ++  M   G  P+ VTY  L     + 
Sbjct: 539 QMLKD-SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKA 597

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   +  +  +M      PN  T  ++++  C  G ++ A   L  MK+      L  +
Sbjct: 598 GKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGY 657

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
              I+GF     S     +L ++EE   +G  P    +  ++D +S AG +    E+  +
Sbjct: 658 RCAIQGF-----SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKE 712

Query: 301 M--VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           M  V + ++ D  +++ L +    A + ++A  + + M + G  P + +F  +I G    
Sbjct: 713 MMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEV 772

Query: 359 VKMQRAMSIYEKMCEIGIN 377
            K   A+ +   +C  G+N
Sbjct: 773 KKWDEALQLCYGICHEGVN 791



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/413 (22%), Positives = 173/413 (41%), Gaps = 25/413 (6%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G +P  + +NA++   S +G VD   ++ ++M +SG      T           G+  ++
Sbjct: 35  GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           L ++    + ++ K +      ++      +  +EA + +++M  +   P+ VTY TL  
Sbjct: 95  LDMI----EREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            + +  +    ++++  M      PN      +V  YC E +   A + L RM      P
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210

Query: 239 NLVVFNSLIK---GFLDIKDSDGVDKALTLMEEFGVKPDV---VTFSTIMDAWSSAGLMG 292
             VV+N  I    G   +   D +D A  +  E      V   V  +         G   
Sbjct: 211 GYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFD 270

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           K  ++  +M++ G  PD   +S +      A + +KA  +   M+  GV P+V  +T +I
Sbjct: 271 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILI 330

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
             +C A  +++A  ++E+M  +G +P + TY  L+  Y +AKQ  +A ++   M + G R
Sbjct: 331 DSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCR 390

Query: 413 PKKSTIQLVADSW--------------RAIGLAREAKRVLKSAEEDRQSM-PN 450
           P   T   + D                + IG +  A        EDR ++ PN
Sbjct: 391 PNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 443



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/412 (20%), Positives = 165/412 (40%), Gaps = 53/412 (12%)

Query: 113 GKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT 172
           G  E+ LK       D   +P+  TYN LV+   S   ++  + V  +M  SG   D  T
Sbjct: 25  GDSEDPLK-------DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFT 77

Query: 173 YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMK 232
               A A  + G    A  M+   +    + +   C  ++SG  +    ++AM FL+RM+
Sbjct: 78  VGCFAHALCKEGRWADALDMI---EREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMR 134

Query: 233 ELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMG 292
                PN+V + +L+ GFL  K      + + +M   G  P+   F++++ ++ +     
Sbjct: 135 CNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYA 194

Query: 293 KCQEIFDDMVKAGIEPDIHVFSI------------------------------------- 315
              ++ + M   G  P   V++I                                     
Sbjct: 195 YAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKV 254

Query: 316 ----LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
                A+     G+  KA  ++  M + G  P+   ++ VI+  C+A K+++A  ++++M
Sbjct: 255 NVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM 314

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
             +G+ P++ TY  L+  + +A    +A+ L + M   G  P   T   +  ++      
Sbjct: 315 KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 374

Query: 432 REAKRVLKSAEEDRQSMPNKKDEIA-VESIHRKQNLSASNSTFLQIPGVVSS 482
            +A  +      D    PN     A V+ + +  N+S +   + ++ G   S
Sbjct: 375 PQANDIFHRM-VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDS 425


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 101/431 (23%), Positives = 214/431 (49%), Gaps = 1/431 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV  G+  +A  ++  +I  G  P + +YT +V A  ++ R     + + ++E+   +P+
Sbjct: 231 LVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPN 290

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N++I+     G+V  A K+   M + G    + TY  LIKGY   G+ E++ KL+ 
Sbjct: 291 VVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIG 350

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  +KN+  ++  Y +L+ A+C+   +++A  +   M+  G++ + V  N+L   Y + 
Sbjct: 351 CM-MEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKL 409

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G   +A ++L  M++  ++P+      ++ G+CK+ +   A +    M    V+  +V +
Sbjct: 410 GHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTY 469

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+L+K    +   +       LM + GV P+ VT+ T++DA+   G   +   I+ D + 
Sbjct: 470 NTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALS 529

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G    I +++ +  G+ +  +  +A+ I   M++ G  P+ + + T+I G+C    +  
Sbjct: 530 KGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVE 589

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+ + +     GI+ + + Y +L+ G   +++  +   LL  M+ + + P   T   +  
Sbjct: 590 ALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIA 649

Query: 424 SWRAIGLAREA 434
            W   G+  +A
Sbjct: 650 GWCDKGMMDKA 660



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 205/412 (49%), Gaps = 3/412 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQ-KRFKSILSLISKVEKDG 59
           + +   KG    A  +F+ + + G  P+L +  +L++ L +  + FK++L +  ++   G
Sbjct: 193 LKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALL-VYEQMIALG 251

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + PD   +  M+NA  + G VDEA    ++M+ S C+P   TYN+LI GY ++G    + 
Sbjct: 252 ILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAK 311

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K+L LMS+ K +  N RTY +L++ +C +  +E+A  ++  M+   +  D   Y  L  A
Sbjct: 312 KVLALMSE-KGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHA 370

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           Y   G    A ++   M    ++ N   C  +++GYCK G++  A   L  MK+  + P+
Sbjct: 371 YCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPD 430

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
              +N+L+ GF   +D     K    M   GV   VVT++T++      G +     I++
Sbjct: 431 SYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWN 490

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            M K G+ P+   +  L   + + G   +A  I       G   ++ ++ T+I G+C   
Sbjct: 491 LMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKME 550

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           K+ +A  I+ KM E+G  P+  TY TL+ GY +      A +L  + E  G+
Sbjct: 551 KLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGI 602



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 121/520 (23%), Positives = 225/520 (43%), Gaps = 69/520 (13%)

Query: 26  RPTLITYTTLVAALTRQKRFKSIL---------------------SLISKVEKDGMKPDS 64
           RP + +Y  +V  L+R + +K +                       L+S   +    P  
Sbjct: 129 RPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSP-- 186

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
            +F+ ++   +E G    A+ +F  M   G  P+  + N+L+    N+ +  E+ K L +
Sbjct: 187 TVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLL---SNLVQNGEAFKALLV 243

Query: 125 MSQ--DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             Q     + P+  +Y I+V A+C +  ++EA+N V +M  S  +P+ VTYN+L   Y  
Sbjct: 244 YEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVS 303

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNME-------------------- 222
            G+   A+++L  M    +  N RT  +++ GYCK G ME                    
Sbjct: 304 LGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHV 363

Query: 223 ---------------DAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
                          DA+R    M ++ +  N V+ NSLI G+  +   +   + L  M+
Sbjct: 364 YGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMK 423

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
           ++ +KPD   ++T++D +       K  ++ D+M   G+   +  ++ L K     G  +
Sbjct: 424 DWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVE 483

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            A  I   M K GV PN V + T++  +       RAM I++     G   ++  Y T++
Sbjct: 484 HALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMI 543

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS 447
            G+ + ++  +A+E+   M+E G  P + T + + D +  +G   EA ++   +E D  S
Sbjct: 544 CGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGIS 603

Query: 448 MPNKKDEIAVESIHRKQNLSASNSTFLQI------PGVVS 481
              +     +  + R + L   N    ++      P VV+
Sbjct: 604 SSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVT 643



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 205/424 (48%), Gaps = 9/424 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A  I+   + +G   ++  Y T++    + ++      +  K+++ G  PD I +
Sbjct: 515 GTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITY 574

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+   + GN+ EA+K+    +  G   +T  YN+LI G   V + EE  KL  L+++
Sbjct: 575 RTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITG---VFRSEELQKLNGLLAE 631

Query: 128 DKN--VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
            KN  + PN  TY  L+  WC K  +++A+N  +KM+  GI P+ +  + +  +  ++G+
Sbjct: 632 MKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGK 691

Query: 186 TYRAEQMLFEMQN-NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
              A  +L ++ + + +  +  +  +  S        +    F  +   + +  N +V+N
Sbjct: 692 IDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNN-IVYN 750

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
             I G    K+ D V + L+ +   G  PD  T+ +++ A S+ G + +   + DDM+ A
Sbjct: 751 IAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINA 810

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+ P+I V++ L  G  ++G   +A  +   + + G+ P VV + T+I G+C   +   A
Sbjct: 811 GLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEA 870

Query: 365 MSIYEKMCEIGINPNLKTYETLLWG-YGEAKQPWRAEELLQVMEE-KGVRPKKSTIQLVA 422
           + + +KM E GI P+  TY TL+ G Y E K       L ++M+  KG       +    
Sbjct: 871 LELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAGKGSSVMDPLVARAY 930

Query: 423 DSWR 426
             WR
Sbjct: 931 VKWR 934



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 201/452 (44%), Gaps = 30/452 (6%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A +I+N + + G  P  +TY TL+ A  +   F   + +       G      L+
Sbjct: 480 GHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLY 539

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N MI    +   + +A +IF KMK+ G  P   TY TLI GY  VG   E+LKL + MS+
Sbjct: 540 NTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKL-KDMSE 598

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              +  +   YN L+        +++   ++ +M    + P+ VTY +L   +   G   
Sbjct: 599 RDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMD 658

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE---VHPNLVVFN 244
           +A    F+M +  + PN      IVS   + G +++A   L+++ +++    H + V   
Sbjct: 659 KAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSV--- 715

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ--------E 296
            L K  L   ++  +      ++ FG K   +  S   +   +  + G C+         
Sbjct: 716 ELPKSDLRHLETQKI------VDSFGKKAMSIPISN--NIVYNIAITGLCKSKNIDDVRR 767

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           I  D++  G  PD + +  L       G+  +A  +   M   G+ PN+V++  +I+G C
Sbjct: 768 ILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLC 827

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
            +  + RA  ++ K+   G++P + TY TL+ GY +  +   A EL   M E+G+ P   
Sbjct: 828 KSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSI 887

Query: 417 T-------IQLVADSWRAIGLAREAKRVLKSA 441
           T       + +   S +++GL  E  +  K +
Sbjct: 888 TYSTLIHGLYMEGKSEQSVGLLNEMMKAGKGS 919



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 167/363 (46%), Gaps = 38/363 (10%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+  +A  +  C++E+        Y  L+ A     R    L +   + K G+K ++++
Sbjct: 339 RGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVI 398

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKP----------------------------- 97
            N++IN   + G+V++A ++   MKD   KP                             
Sbjct: 399 CNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMH 458

Query: 98  ------TTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
                 T  TYNTL+K   +VG  E +L +  LM + + V PN+ TY  L+ A+    + 
Sbjct: 459 NKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHK-RGVAPNEVTYCTLLDAFFKVGTF 517

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           + A  +    ++ G       YNT+   + +  +  +A+++  +M+     P+E T   +
Sbjct: 518 DRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTL 577

Query: 212 VSGYCKEGNMEDAMRFLYRMKELE-VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           + GYCK GN+ +A++ L  M E + +  +  ++NSLI G    ++   ++  L  M+   
Sbjct: 578 IDGYCKVGNLVEALK-LKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRE 636

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           + P+VVT+ +++  W   G+M K    +  M+  GI P+I + S +     R G+  +A 
Sbjct: 637 LSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEAN 696

Query: 331 SIL 333
            IL
Sbjct: 697 LIL 699



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 48/94 (51%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G    A  +FN L  +G  PT++TY TL+    +  R    L L  K+ ++G+
Sbjct: 823 INGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGI 882

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
            P SI ++ +I+     G  ++++ +  +M  +G
Sbjct: 883 CPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 205/448 (45%), Gaps = 23/448 (5%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKS--ILSLISKVEKDGMKPDSILFNAM 70
           A+ + N +   G  P  + Y   + ++  Q++  S  +L L  K+  + +  + +L    
Sbjct: 131 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVN 190

Query: 71  INACSES----GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +   +      G  D+A ++ ++M   G  P TSTY+ +I    +  K E++  L Q M 
Sbjct: 191 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 250

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
               V P+  TY IL+ ++C    IE+A  +  +M + G  P  VTY  L  AY +  + 
Sbjct: 251 M-VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 309

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM--------------- 231
            +A  +   M +   RPN+ T G +V G CK GN+  A     ++               
Sbjct: 310 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC 369

Query: 232 -KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
                + PN+V + +L+ G       D   + L  M   G +P+ + +  ++D +  AG 
Sbjct: 370 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 429

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           +   QE+F  M K G  P +H ++ L     + G    A  +L+ M K    PNVV +T 
Sbjct: 430 IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTA 489

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I G C   + ++A+ +   M E G +PN+ TY  L+ G G+A +   + +L   M  KG
Sbjct: 490 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 549

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVL 438
             P   T +++ +   A GL  +A+ +L
Sbjct: 550 CSPNYVTYRVLINHLCAAGLLDKARLLL 577



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 200/435 (45%), Gaps = 25/435 (5%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G GK  +A  +   ++ +G  P   TY+ ++  L    + +    L  +++  G+ PD
Sbjct: 198 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 257

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +  +I++  ++G +++A  +F++M+  GC PT  TY  LI  Y    +  ++  +  
Sbjct: 258 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 317

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D   +PND TY  LV   C   +I +A+ V  K++ +    D+  Y          
Sbjct: 318 RMV-DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY---------- 366

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
              +  E        + + PN  T G +V G CK   ++ A   L  M      PN +V+
Sbjct: 367 ---FPCE------DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 417

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           ++LI GF      D   +    M + G  P V T+++++D     G +    ++   M+K
Sbjct: 418 DALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 477

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
               P++  ++ +  G  R GE +KA  +L+ M + G  PNVV +T +I G   A K+  
Sbjct: 478 DSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDL 537

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE----KGVRPKKSTIQ 419
           ++ ++ +M   G +PN  TY  L+     A    +A  LL  M++    K ++  +  IQ
Sbjct: 538 SLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQ 597

Query: 420 LVADSWRA-IGLARE 433
             + S+ A +G+  E
Sbjct: 598 GFSKSFIASLGILEE 612



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/468 (23%), Positives = 203/468 (43%), Gaps = 50/468 (10%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +  L    K  +A  +F  +   G  P + TYT L+ +  +    +    L  ++   G 
Sbjct: 230 ITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGC 289

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEE 117
            P  + + A+I+A  ++  V +A  IF +M D+GC+P   TY  L+ G    GN+ K  E
Sbjct: 290 SPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFE 349

Query: 118 SLKLL-----------QLMSQDKN-VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
               L               +D++ + PN  TY  LV   C  + ++ A  ++  M++SG
Sbjct: 350 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG 409

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
            +P+ + Y+ L   + + G+   A+++  +M      P+  T   ++    K+G ++ AM
Sbjct: 410 CEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 469

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           + L +M +    PN+V + ++I G   I +S+   K L+LMEE G  P+VVT++ ++D  
Sbjct: 470 KVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 529

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE--------------- 330
             AG +    ++F  M + G  P+   + +L      AG   KA                
Sbjct: 530 GKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYL 589

Query: 331 ------------------SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
                              IL  M  YG  P   ++  +I  +  A +++ AM ++++M 
Sbjct: 590 QGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMM 649

Query: 373 EI--GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
           E+   +  +   Y +L+     A Q   A  L   M  +G  P+ S  
Sbjct: 650 EVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVF 697



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 188/442 (42%), Gaps = 32/442 (7%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E G      T      AL ++ R+   L +I   E++  K D++L   MI+   E+   D
Sbjct: 3   ESGFCMDRFTVGCFAHALCKEGRWADALDMI---EREDFKLDTVLCTHMISGLMEASYFD 59

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           EAM    +M+ + C P   TY TL+ G+    +     +++ +M   +   PN   +N L
Sbjct: 60  EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMM-MTEGCNPNPSLFNSL 118

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR------AEQMLFE 195
           V ++C++     A+ ++ +M   G  P  V YN    +     +         AE++  E
Sbjct: 119 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGE 178

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M       N+          C  G  + A + +  M      P+   ++ +I  FL    
Sbjct: 179 MLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT-FL--CH 235

Query: 256 SDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +  V+KA  L +E    GV PDV T++ ++D++  AGL+ + Q +F++M   G  P +  
Sbjct: 236 ATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVT 295

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM- 371
           ++ L   Y++A +  +A  I   M   G  PN V +  ++ G C A  + +A  +Y K+ 
Sbjct: 296 YTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI 355

Query: 372 -------------CE--IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
                        CE    + PN+ TY  L+ G  +A +   A ELL  M   G  P   
Sbjct: 356 GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHI 415

Query: 417 TIQLVADSWRAIGLAREAKRVL 438
               + D +   G    A+ V 
Sbjct: 416 VYDALIDGFCKAGKIDSAQEVF 437



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/455 (23%), Positives = 191/455 (41%), Gaps = 52/455 (11%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A ++F  +   G  PT++TYT L+ A  + K+      +  ++   G +P+ + +
Sbjct: 272 GLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTY 331

Query: 68  NAMINACSESGNVDEAMKIFQKM---KDSG-------CK------PTTSTYNTLIKGYGN 111
            A+++   ++GN+ +A +++ K+    DS        C+      P   TY  L+ G   
Sbjct: 332 GALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCK 391

Query: 112 VGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAV 171
             K + + +LL  M      +PN   Y+ L+  +C    I+ A  V  +M   G  P   
Sbjct: 392 AHKVDHAHELLDAM-LSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVH 450

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
           TY +L     + G    A ++L +M  +   PN  T   ++ G C+ G  E A++ L  M
Sbjct: 451 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 510

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
           +E    PN+V + +LI G       D      T M   G  P+ VT+  +++   +AGL+
Sbjct: 511 EEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLL 570

Query: 292 GKCQ---------------------------------EIFDDMVKAGIEPDIHVFSILAK 318
            K +                                  I ++M   G  P   V+ +L  
Sbjct: 571 DKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLID 630

Query: 319 GYVRAGEPQKAESILTSMRKY--GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
            + +AG  + A  +   M +    V  +  M+ ++I   C A +++ A  +Y +M   G 
Sbjct: 631 CFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGF 690

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
            P L  +  L+ G  E K+   A +L   +  +GV
Sbjct: 691 VPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 725



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 172/379 (45%), Gaps = 11/379 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+G     ++ + F C       P ++TY  LV  L +  +      L+  +   G +P+
Sbjct: 354 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 413

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I+++A+I+   ++G +D A ++F +M   G  P+  TY +LI      G+ + ++K+L 
Sbjct: 414 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 473

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +D +  PN  TY  ++   C     E+A  ++  M   G  P+ VTY  L     + 
Sbjct: 474 QMLKD-SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKA 532

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   +  +  +M      PN  T  ++++  C  G ++ A   L  MK+      L  +
Sbjct: 533 GKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGY 592

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
              I+GF     S     +L ++EE   +G  P    +  ++D +S AG +    E+  +
Sbjct: 593 RCAIQGF-----SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKE 647

Query: 301 M--VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           M  V + ++ D  +++ L +    A + ++A  + + M + G  P + +F  +I G    
Sbjct: 648 MMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEV 707

Query: 359 VKMQRAMSIYEKMCEIGIN 377
            K   A+ +   +C  G+N
Sbjct: 708 KKWDEALQLCYGICHEGVN 726



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/364 (19%), Positives = 144/364 (39%), Gaps = 46/364 (12%)

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           M  SG   D  T    A A  + G    A  M+   +    + +   C  ++SG  +   
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDMI---EREDFKLDTVLCTHMISGLMEASY 57

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
            ++AM FL+RM+     PN+V + +L+ GFL  K      + + +M   G  P+   F++
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI------------------------- 315
           ++ ++ +        ++ + M   G  P   V++I                         
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 177

Query: 316 ----------------LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
                            A+     G+  KA  ++  M + G  P+   ++ VI+  C+A 
Sbjct: 178 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 237

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           K+++A  ++++M  +G+ P++ TY  L+  + +A    +A+ L + M   G  P   T  
Sbjct: 238 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 297

Query: 420 LVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIA-VESIHRKQNLSASNSTFLQIPG 478
            +  ++       +A  +      D    PN     A V+ + +  N+S +   + ++ G
Sbjct: 298 ALIHAYLKAKQVPQANDIFHRM-VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIG 356

Query: 479 VVSS 482
              S
Sbjct: 357 TSDS 360


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 178/356 (50%), Gaps = 1/356 (0%)

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
            ++ F++M+ +GC P   TYNT+I GY  + + +E+   L+ M   K ++PN  T+N+++
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGL-KGLEPNLITFNMII 60

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
              C    ++E   V+ +M   G  PD VTYNTL   Y + G  ++A  +  EM  N + 
Sbjct: 61  NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           PN  T   +++  CK GN+  AM F  +M    + PN   + ++I GF      D   + 
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           L  M   G  P +VT++ +++     G M +   +  DMV  G+ PD+  +S +  G+ R
Sbjct: 181 LNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFAR 240

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
             E  +A  +   M    V P+ V ++++I G C   ++  A  ++++M  I + P+  T
Sbjct: 241 NQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFT 300

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           Y TL+  Y +     +A  L   M +KG  P   T  ++ +       ++EA+R+L
Sbjct: 301 YTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLL 356



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 186/358 (51%), Gaps = 7/358 (1%)

Query: 49  LSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
           L    ++E++G  P+ + +N MI+   +    DEA    + M   G +P   T+N +I G
Sbjct: 3   LRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIING 62

Query: 109 YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP 168
               G+ +E+ ++L  MS+ K   P++ TYN LV  +C + +  +A  +  +MV +G+ P
Sbjct: 63  LCRDGRLKETSEVLVEMSR-KGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           + VTY +L  +  + G   RA +   +M    + PNERT   I++G+ ++G +++A R L
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAW 285
             M      P++V +N+LI G   +     +++A+ L+++    GV PDVV++STI+  +
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGR---MEEAIGLLQDMVGKGVLPDVVSYSTIISGF 238

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
           +    + +  ++  +M+   + PD   +S L +G        +A  +   M    + P+ 
Sbjct: 239 ARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDE 298

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
             +TT+I+ +C    + +A+ ++++M + G  P+  TY  L+ G  +  +   A  LL
Sbjct: 299 FTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLL 356



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/431 (23%), Positives = 190/431 (44%), Gaps = 16/431 (3%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  P LIT+  ++  L R  R K    ++ ++ + G  PD + +N ++N   + GN  +
Sbjct: 47  KGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQ 106

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+ +  +M  +G  P   TY +LI      G    +++    M   + + PN+RTY  ++
Sbjct: 107 ALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQM-HVRGLCPNERTYTTII 165

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
             +  +  ++EA+ V+ +M  SG  P  VTYN L   +   G    A  +L +M    V 
Sbjct: 166 NGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVL 225

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+  +   I+SG+ +   ++ A +    M    V P+ V ++SLI+G  + +        
Sbjct: 226 PDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDM 285

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              M    + PD  T++T+++A+   G + K   + D+M++ G  PD   +++L  G  +
Sbjct: 286 FQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNK 345

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN-----AVK----------MQRAMSI 367
               ++A  +L  +      P+ V + T+I   CN     AV           M  A  +
Sbjct: 346 QARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQV 405

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           +E M      PN   Y  ++ G+       +A +L + M      P   T+  +  +   
Sbjct: 406 FESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFT 465

Query: 428 IGLAREAKRVL 438
            G+  E   V+
Sbjct: 466 EGMDGELNEVI 476



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 198/405 (48%), Gaps = 22/405 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  E   +   +  +G+ P  +TY TLV    ++  F   L L +++ ++G+
Sbjct: 60  INGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGL 119

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + + ++IN+  ++GN++ AM+ F +M   G  P   TY T+I G+   G  +E+ +
Sbjct: 120 SPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYR 179

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M++   + P+  TYN L+   C    +EEA  ++  MV  G+ PD V+Y+T+   +
Sbjct: 180 VLNEMTRSGFI-PSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGF 238

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+  E  RA QM  EM    V P+  T   ++ G C++  + +A      M  +++ P+ 
Sbjct: 239 ARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDE 298

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             + +LI  +   K+ D ++KAL L +E    G  PD VT++ +++  +      + + +
Sbjct: 299 FTYTTLINAY--CKEGD-LNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRL 355

Query: 298 -----FDDMVKAGIEPDIHVFSI----------LAKGYVRAGEPQKAESILTSMRKYGVH 342
                +DD + + +  +  + +           L KG+   G   +A+ +  SM      
Sbjct: 356 LLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHK 415

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           PN  ++  +I G C    + +A  +Y++M  +   P+  T   L+
Sbjct: 416 PNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALV 460



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/434 (24%), Positives = 197/434 (45%), Gaps = 22/434 (5%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P ++TY T++    + KR       +  +   G++P+ I FN +IN     G + E 
Sbjct: 13  GCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKET 72

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            ++  +M   G  P   TYNTL+ GY   G   ++L L   M ++  + PN  TY  L+ 
Sbjct: 73  SEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRN-GLSPNVVTYTSLIN 131

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C   ++  A     +M   G+ P+  TY T+   +AQ G    A ++L EM  +   P
Sbjct: 132 SMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIP 191

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   +++G+C  G ME+A+  L  M    V P++V ++++I GF   ++   +D+A 
Sbjct: 192 SIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQE---LDRAF 248

Query: 264 TLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
            +  E     V PD VT+S+++        + +  ++F +M+   + PD   ++ L   Y
Sbjct: 249 QMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAY 308

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            + G+  KA  +   M + G  P+ V +  +I+G     + + A  +  K+      P+ 
Sbjct: 309 CKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSA 368

Query: 381 KTYETLLW---------------GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            TY TL+                G+        A+++ + M  K  +P ++   ++    
Sbjct: 369 VTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGH 428

Query: 426 RAIGLAREAKRVLK 439
             IG   +A ++ K
Sbjct: 429 CRIGNVLKAYKLYK 442



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/368 (23%), Positives = 166/368 (45%), Gaps = 16/368 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   EA+ + N +   G  P+++TY  L+       R +  + L+  +   G+
Sbjct: 165 INGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGV 224

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + ++ +I+  + +  +D A ++  +M      P   TY++LI+G     +  E+  
Sbjct: 225 LPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACD 284

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + Q M   K + P++ TY  L+ A+C +  + +A ++  +M+  G  PDAVTYN L    
Sbjct: 285 MFQEMLTIK-LPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGL 343

Query: 181 AQYGETYRAEQMLFEMQNNQVRPN--------ERTCGI-------IVSGYCKEGNMEDAM 225
            +   +  A ++L ++  +   P+        E  C I       +V G+C +G M++A 
Sbjct: 344 NKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEAD 403

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           +    M      PN  ++N +I G   I +     K    M      P  VT   ++ A 
Sbjct: 404 QVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKAL 463

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
            + G+ G+  E+  D++++    D  +  +L +   + G      ++LT M K G+ P+ 
Sbjct: 464 FTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPST 523

Query: 346 VMFTTVIS 353
              T  I+
Sbjct: 524 GTPTNAIA 531



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 109/217 (50%)

Query: 224 AMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD 283
            +RF   M+     PN+V +N++I G+  +K +D     L  M   G++P+++TF+ I++
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
                G + +  E+  +M + G  PD   ++ L  GY + G   +A  +   M + G+ P
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           NVV +T++I+  C A  + RAM  +++M   G+ PN +TY T++ G+ +      A  +L
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
             M   G  P   T   + +    +G   EA  +L+ 
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQD 218


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1202

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 209/410 (50%), Gaps = 1/410 (0%)

Query: 12   EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
            +A  +F+ ++     P+LITY TL+    +    +    +  +++ D ++P  I FN ++
Sbjct: 605  DAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLL 664

Query: 72   NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                ++G V++A  +  +MKD G  P   T++ L  GY +  K + +L + +  + D  +
Sbjct: 665  KGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYE-TAVDSGL 723

Query: 132  KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            K N  T +IL+ A C +  IE+A  ++ + +A G+ P+ V YNT+   Y++ G+   A  
Sbjct: 724  KMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARM 783

Query: 192  MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
             +  M+   ++P+      ++  +C+ G+ME+A + + +MK   V P++  +N LI G+ 
Sbjct: 784  KIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYG 843

Query: 252  DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
               + D     L  ME+ G  P+VV++ T+++       + + Q +  DM   G+ P++ 
Sbjct: 844  RKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVR 903

Query: 312  VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++++L  G    G+ + A      M K G+  N+V + T+I G     K+  A  +  ++
Sbjct: 904  IYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEI 963

Query: 372  CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
               G+ P++ TY +L+ GY  A    R   L + M+  G++P   T  L+
Sbjct: 964  SRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLL 1013



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 208/449 (46%), Gaps = 36/449 (8%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  ++E   RP+   Y   + A  +       L L ++++ D + P   ++N +I+   
Sbjct: 539 VFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLC 598

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           +   + +A ++F +M      P+  TYNTLI GY   G PE+S K+ + M  D N++P+ 
Sbjct: 599 KVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKAD-NIEPSL 657

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            T+N L++       +E+A NV+ +M   G  PDA T++ L   Y+   +   A  +   
Sbjct: 658 ITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYET 717

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
             ++ ++ N  TC I+++  CKEG +E A   L R     + PN V++N++I G+    D
Sbjct: 718 AVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGD 777

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
             G    +  ME+ G+KPD + ++ ++  +   G M   ++  + M   G+ P +  ++I
Sbjct: 778 LVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNI 837

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS---------------------- 353
           L  GY R  E  K   +L  M   G  PNVV + T+I+                      
Sbjct: 838 LIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRG 897

Query: 354 -------------GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
                        G C+  K++ A    E+M + GI  NL TY TL+ G     +   AE
Sbjct: 898 VSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAE 957

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           ++L  +  KG++P   T   +   +R  G
Sbjct: 958 DMLLEISRKGLKPDVFTYNSLISGYRFAG 986



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 113/446 (25%), Positives = 201/446 (45%), Gaps = 41/446 (9%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            +N L  +G+  +A  I    + +G  P  + Y T++   +R+         I  +EK GM
Sbjct: 734  LNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGM 793

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            KPD + +N +I    E G+++ A +   KMK  G  P+  TYN LI GYG   + ++   
Sbjct: 794  KPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 853

Query: 121  LLQLMS----------------------------------QDKNVKPNDRTYNILVRAWC 146
            LL+ M                                   +D+ V PN R YN+L+   C
Sbjct: 854  LLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCC 913

Query: 147  SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            SK  IE+A+    +M   GI+ + VTYNTL    +  G+   AE ML E+    ++P+  
Sbjct: 914  SKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVF 973

Query: 207  TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
            T   ++SGY   GN++  +     MK   + P L  ++ LI     +   +G++    + 
Sbjct: 974  TYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLIS----LCTKEGIELTKKIF 1029

Query: 267  EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
             E  ++PD++ ++ ++  ++  G M K   +   M++  I  D   ++ L  G ++ G+ 
Sbjct: 1030 GEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKL 1089

Query: 327  QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             +  S++  M+   + P    +  ++ G C       A   Y +M E G+  ++   + L
Sbjct: 1090 CEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDEL 1149

Query: 387  LWGYGEAKQPWRAEELLQVMEEKGVR 412
            + G    K+ WR++E   V+ E   R
Sbjct: 1150 VSGL---KEEWRSKEAENVISEMNGR 1172



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 201/455 (44%), Gaps = 14/455 (3%)

Query: 2   NILVGKGKPHEAHYIFNCLIEEGHRPTL--ITYTTL---VAALTRQKRFKSILSLISKVE 56
           N + G  + HE       L+++    T   + Y+ L    A  T  K   S  SL S   
Sbjct: 420 NPVTGDEERHEKLRNLRVLLQQNRIETARGVLYSLLRSDSAPFTSPKELFSAFSLSSPSL 479

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           K       +L + ++N   ES  + EA  +F  +++ G  P++ +   L+       +  
Sbjct: 480 KHDFS--YLLLSVLLN---ESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFR 534

Query: 117 ESLK-LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
            ++   L ++  D   +P+   Y   ++A    + + +   +  +M    I P    YN 
Sbjct: 535 VTINVFLNILESD--FRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNV 592

Query: 176 LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
           L     +  +   AEQ+  EM   ++ P+  T   ++ GYCK+GN E + +   RMK   
Sbjct: 593 LIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADN 652

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           + P+L+ FN+L+KG       +  +  LT M++ G  PD  TFS + D +SS        
Sbjct: 653 IEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAAL 712

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
            +++  V +G++ + +  SIL     + G+ +KAE IL      G+ PN V++ T+I G+
Sbjct: 713 GVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGY 772

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
                +  A    + M + G+ P+   Y  L+  + E      AE+ +  M+ KGV P  
Sbjct: 773 SRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSV 832

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            T  ++   +       +   +LK   ED  +MPN
Sbjct: 833 ETYNILIGGYGRKYEFDKCFDLLKEM-EDNGTMPN 866


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 196/400 (49%), Gaps = 41/400 (10%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P++  Y  L+  + ++ R +  + L+ ++  +G+ P+ + ++ +IN+   SGNV+ A  
Sbjct: 241 KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFA 300

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +F +M   GC     T+  LIKG    GK  E+L L +LM QD   +PN   YN L+   
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD-GCEPNVVAYNTLIHGL 359

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM------------- 192
           CS  S+EEA  V  +M  SG  P+  TY+ L   +A+ G+   A +              
Sbjct: 360 CSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNV 419

Query: 193 --------------LFEMQNNQVR--------PNERTCGIIVSGYCKEGNMEDAMRFLYR 230
                         +F+  N+ V         PN  T    + G C  G +E AM+ L R
Sbjct: 420 VTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLER 479

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
           M+     PN+  +N L+     +   +        +E   ++P++VT++T++  +S AG+
Sbjct: 480 MQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGM 539

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL---TSMRKYGVHPNVVM 347
           MG+  ++F   +  G  PD   ++ +   Y + G+ + A  ++   +SM+++  HP+++ 
Sbjct: 540 MGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEW--HPDIIT 597

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           +T++I G CN + ++ AM+  +K    GI PN  T+  L+
Sbjct: 598 YTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/473 (23%), Positives = 210/473 (44%), Gaps = 31/473 (6%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  +F  + E G +PT+  Y  L+ AL  + +F+ I  L + ++KDG+ P+   +
Sbjct: 123 GSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTY 182

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGC------------------------------KP 97
           N ++ A  ++  VD A K+F +M + GC                              KP
Sbjct: 183 NILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKP 242

Query: 98  TTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
           +   YN LI G    G+ E ++KLL  M  D  V PN  +Y+ ++ + C   ++E A+ +
Sbjct: 243 SVPVYNALIDGMCKEGRIEVAIKLLGEM-MDNGVDPNVVSYSCIINSLCVSGNVELAFAL 301

Query: 158 VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
             +M   G   +  T+  L +     G+ Y A  +   M  +   PN      ++ G C 
Sbjct: 302 FAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCS 361

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
            G++E+A++   +M+     PN+  ++ LI GF    D  G  +    M   G +P+VVT
Sbjct: 362 NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVT 421

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           ++ ++D      +  +   + + M   G  P+   F+   KG    G  + A  +L  M+
Sbjct: 422 YTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQ 481

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
            +G  PN+  +  ++       K + A  +++++    + PNL TY T+L+G+  A    
Sbjct: 482 GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG 541

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            A +L      +G  P   T   +  ++   G  + A ++++     ++  P+
Sbjct: 542 EALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPD 594



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 210/455 (46%), Gaps = 36/455 (7%)

Query: 28  TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIF 87
           T  TY  ++  L R+     +  ++ +++ DG+     LF  +IN     G+ ++A+K+F
Sbjct: 73  TASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMF 132

Query: 88  QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
            ++ + GCKPT   YN L+    +  K +    L   M +D  + PN  TYNIL++A C 
Sbjct: 133 YRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKD-GLIPNVFTYNILLKALCK 191

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ---------------- 191
            + ++ A  +  +M   G  PDAVTY T+  +  + G+   A +                
Sbjct: 192 NDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALI 251

Query: 192 --------------MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
                         +L EM +N V PN  +   I++  C  GN+E A     +M      
Sbjct: 252 DGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCD 311

Query: 238 PNLVVFNSLIKG-FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            N+  F  LIKG F+  K  + +D    LM + G +P+VV ++T++    S G + +  +
Sbjct: 312 ANIHTFTPLIKGCFMRGKLYEALD-LWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           + D M ++G  P++  +SIL  G+ ++G+   A      M  +G  PNVV +T ++   C
Sbjct: 371 VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLC 430

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY-GEAKQPWRAEELLQVMEEKGVRPKK 415
                 +A S+ EKM   G  PN  T+ T + G  G  +  W A +LL+ M+  G  P  
Sbjct: 431 KNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEW-AMKLLERMQGHGCLPNI 489

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           +T   + D+   +    EA  + +  E  R   PN
Sbjct: 490 TTYNELLDALFRMNKYEEAFGLFQEIEA-RNLQPN 523



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 128/237 (54%), Gaps = 2/237 (0%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           +N +I  G RP ++TYT +V  L +   F    SL+ K+  +G  P+++ FN  I     
Sbjct: 407 WNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCG 466

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
           +G V+ AMK+ ++M+  GC P  +TYN L+     + K EE+  L Q + + +N++PN  
Sbjct: 467 NGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEI-EARNLQPNLV 525

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           TYN ++  +     + EA  +  K +  G  PD++TYNT+  AY + G+   A Q++  +
Sbjct: 526 TYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERV 585

Query: 197 QN-NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
            +  +  P+  T   ++ G C   N+E+AM FL +     + PN   +N+L++ F D
Sbjct: 586 SSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFD 642



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 91/177 (51%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G G+   A  +   +   G  P + TY  L+ AL R  +++    L  ++E   ++P+
Sbjct: 464 LCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPN 523

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N ++   S +G + EA+++F K    G  P + TYNT+I  Y   GK + + +L++
Sbjct: 524 LVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVE 583

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            +S  K   P+  TY  L+   C+  +IEEA   + K +  GI P+  T+N L R +
Sbjct: 584 RVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/342 (20%), Positives = 143/342 (41%), Gaps = 32/342 (9%)

Query: 163 ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNME 222
           ++  Q  A TY  +     +  E    + +L +M+ + +   E     I++GY + G+ E
Sbjct: 67  SNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAE 126

Query: 223 DAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIM 282
            A++  YR+ E    P + ++N L+   L       ++   T M++ G+ P+V T++ ++
Sbjct: 127 QALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILL 186

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPD------------------------------IHV 312
            A      +    ++F +M   G  PD                              + V
Sbjct: 187 KALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPV 246

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++ L  G  + G  + A  +L  M   GV PNVV ++ +I+  C +  ++ A +++ +M 
Sbjct: 247 YNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMF 306

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
             G + N+ T+  L+ G     + + A +L ++M + G  P       +     + G   
Sbjct: 307 LRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLE 366

Query: 433 EAKRVLKSAEEDRQSMPNKKD-EIAVESIHRKQNLSASNSTF 473
           EA +V    +     +PN     I ++   +  +L  ++ T+
Sbjct: 367 EALQVCDQMQRS-GCLPNVTTYSILIDGFAKSGDLVGASETW 407


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 205/421 (48%), Gaps = 1/421 (0%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
            L+  G   EA  ++  +I EG +P++ TY+ L+ AL R++   +I+ L+ ++E  G++P
Sbjct: 201 FLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRP 260

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           +   +   I     +G +D+A  I + M+D GC P   TY  LI      GK +++ +L 
Sbjct: 261 NIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELY 320

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             M    + KP+  TY  L+  + +   +E       +M A G  PD VTY  L  A  +
Sbjct: 321 TKMRASSH-KPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCK 379

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+  +A  ML  M+   + PN  T   ++SG      +++A+     M+ L V P    
Sbjct: 380 SGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYS 439

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +   I  +  + D +        M++ G+ P +   +  + + +  G + + ++IF+D+ 
Sbjct: 440 YVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIH 499

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G+ PD   ++++ K Y +AG+  KA  +LT M   G  P++++  ++I     A ++ 
Sbjct: 500 NCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVD 559

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A  ++ ++ ++ + P + TY  L+ G G+  +  +A +L   M+E G  P   T   + 
Sbjct: 560 EAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALL 619

Query: 423 D 423
           D
Sbjct: 620 D 620



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 174/356 (48%), Gaps = 8/356 (2%)

Query: 35   LVAALTRQKRFKSILSLISKVEKD-GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS 93
            L+  L +QK+      L  K  K  G  P    +N +++        + A+K+F +MK++
Sbjct: 758  LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817

Query: 94   GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
            GC P   TYN L+  +G   + +E  +L   M   +  KPN  T+NI++ A    NSI +
Sbjct: 818  GCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLC-RGCKPNIITHNIIISALVKSNSINK 876

Query: 154  AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
            A ++ Y++++    P   TY  L     + G +  A ++  EM + Q +PN     I+++
Sbjct: 877  ALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILIN 936

Query: 214  GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---G 270
            G+ K GN+  A     RM +  + P+L  +  L++       +  VD A+   EE    G
Sbjct: 937  GFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFM---TGRVDDAVHYFEELKLTG 993

Query: 271  VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
            + PD V+++ +++    +  + +   +F +M   GI P+++ ++ L   +  AG   +A 
Sbjct: 994  LDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAG 1053

Query: 331  SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             +   ++  G+ PNV  +  +I G   +    RA S+++KM  +G +PN  T+  L
Sbjct: 1054 KMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/426 (23%), Positives = 192/426 (45%), Gaps = 41/426 (9%)

Query: 3   ILVGKGKPHEAHYIFNCLIEE----GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           ++V  G+  +   I + L+EE    G RP + TYT  +  L R  R      ++  +E +
Sbjct: 233 LMVALGRRRDTGTIMD-LLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDE 291

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVG----- 113
           G  PD + +  +I+A   +G +D+A +++ KM+ S  KP   TY TL+  +GN G     
Sbjct: 292 GCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETV 351

Query: 114 ------------------------------KPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
                                         K +++  +L +M + + + PN  TYN L+ 
Sbjct: 352 KRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVM-RVRGIVPNLHTYNTLIS 410

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
              +   ++EA  +   M + G+ P A +Y      Y + G+  +A     +M+   + P
Sbjct: 411 GLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMP 470

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +   C   +    + G + +A      +    + P+ V +N ++K +      D   K L
Sbjct: 471 SIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLL 530

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           T M   G +PD++  ++++D    AG + +  ++F  +    + P +  ++IL  G  + 
Sbjct: 531 TEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKE 590

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+  KA  +  SM++ G  PN V F  ++   C    +  A+ ++ +M  +  +P++ TY
Sbjct: 591 GKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTY 650

Query: 384 ETLLWG 389
            T+++G
Sbjct: 651 NTIIYG 656



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 114/498 (22%), Positives = 213/498 (42%), Gaps = 72/498 (14%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  IFN +   G  P  +TY  ++   ++  +      L++++  +G +PD I+ 
Sbjct: 486 GRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVV 545

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N++I+   ++G VDEA ++F ++KD    PT  TYN LI G G  GK  ++L L   M +
Sbjct: 546 NSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSM-K 604

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAW-------------------NVVYKMVASG--- 165
           +    PN  T+N L+   C  ++++ A                     ++Y ++  G   
Sbjct: 605 ESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAG 664

Query: 166 ------------IQPDAVTYNTLARAYAQYGETYRAEQMLFEM-------QNNQVRPNER 206
                       + PD VT  TL     + G    A +++ E         +NQV     
Sbjct: 665 YAFWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELM 724

Query: 207 TC---------------GIIVSGYCKEGNM--------------EDAMRFLYRM-KELEV 236
            C               G++ +  C++ N+               DA +   +  K L  
Sbjct: 725 ECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGT 784

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           HP    +N L+ G L    ++   K    M+  G  P++ T++ ++DA   +  + +  E
Sbjct: 785 HPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFE 844

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           ++++M+  G +P+I   +I+    V++    KA  +   +      P    +  +I G  
Sbjct: 845 LYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLL 904

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
            A + + AM I+E+M +    PN   Y  L+ G+G+A     A +L + M ++G+RP   
Sbjct: 905 KAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLK 964

Query: 417 TIQLVADSWRAIGLAREA 434
           +  ++ +     G   +A
Sbjct: 965 SYTILVECLFMTGRVDDA 982



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 174/357 (48%), Gaps = 3/357 (0%)

Query: 63   DSILFNAMINACSESGNVDEAMKIFQKMKDS-GCKPTTSTYNTLIKGYGNVGKPEESLKL 121
            D+++   +   C +   +D A K+F K   S G  PT  +YN L+ G       E +LKL
Sbjct: 752  DNLILPLIRVLCKQKKALD-AKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKL 810

Query: 122  LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
               M ++    PN  TYN+L+ A      I+E + +  +M+  G +P+ +T+N +  A  
Sbjct: 811  FVEM-KNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALV 869

Query: 182  QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
            +     +A  + +E+ +    P   T G ++ G  K G  E+AM+    M + +  PN  
Sbjct: 870  KSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCA 929

Query: 242  VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            ++N LI GF    + +        M + G++PD+ +++ +++     G +      F+++
Sbjct: 930  IYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEEL 989

Query: 302  VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
               G++PD   ++++  G  ++   ++A S+ + M+  G+ P +  +  +I  + NA  +
Sbjct: 990  KLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMV 1049

Query: 362  QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
             +A  ++E++  +G+ PN+ TY  L+ G+ ++    RA  + + M   G  P   T 
Sbjct: 1050 DQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTF 1106



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 170/371 (45%), Gaps = 1/371 (0%)

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N M+      G V++   +F  M+        +TY T+ K     G   ++   L  M Q
Sbjct: 126 NYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQ 185

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              V  N  +YN L+         +EA  V  +M++ G++P   TY+ L  A  +  +T 
Sbjct: 186 AGFVL-NAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTG 244

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
               +L EM+   +RPN  T  I +    + G ++DA   L  M++    P++V +  LI
Sbjct: 245 TIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLI 304

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
                    D   +  T M     KPD+VT+ T+M  + + G +   +  + +M   G  
Sbjct: 305 DALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYA 364

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+  ++IL +   ++G+  +A  +L  MR  G+ PN+  + T+ISG  N  ++  A+ +
Sbjct: 365 PDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALEL 424

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           +  M  +G+ P   +Y   +  YG+   P +A +  + M+++G+ P  +       S   
Sbjct: 425 FNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAE 484

Query: 428 IGLAREAKRVL 438
           +G  REAK + 
Sbjct: 485 MGRIREAKDIF 495



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/431 (21%), Positives = 186/431 (43%), Gaps = 36/431 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +  ++F+ + ++       TY T+  AL+ +   +     + K+ + G   ++  +
Sbjct: 136 GRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSY 195

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I    + G   EA+K++++M   G KP+  TY+ L+   G        + LL+ M +
Sbjct: 196 NGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEM-E 254

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              ++PN  TY I +R       I++A+ ++  M   G  PD VTY              
Sbjct: 255 TLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYT------------- 301

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
                                 +++   C  G ++ A     +M+     P+LV + +L+
Sbjct: 302 ----------------------VLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLM 339

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             F +  D + V +  + ME  G  PDVVT++ +++A   +G + +  ++ D M   GI 
Sbjct: 340 SKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIV 399

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P++H ++ L  G +      +A  +  +M   GV P    +   I  +      ++A+  
Sbjct: 400 PNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDT 459

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           +EKM + GI P++      L+   E  +   A+++   +   G+ P   T  ++   +  
Sbjct: 460 FEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSK 519

Query: 428 IGLAREAKRVL 438
            G   +A ++L
Sbjct: 520 AGQIDKATKLL 530



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 155/319 (48%), Gaps = 7/319 (2%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            M+ L+G      A  +F  +   G  P + TY  L+ A  + KR   +  L +++   G 
Sbjct: 795  MDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGC 854

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            KP+ I  N +I+A  +S ++++A+ ++ ++      PT  TY  LI G    G+ EE++K
Sbjct: 855  KPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMK 914

Query: 121  LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            + + M  D   KPN   YNIL+  +    ++  A ++  +M+  GI+PD  +Y  L    
Sbjct: 915  IFEEMP-DYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECL 973

Query: 181  AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
               G    A     E++   + P+  +  ++++G  K   +E+A+     MK   + P L
Sbjct: 974  FMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPEL 1033

Query: 241  VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
              +N+LI   L   ++  VD+A  + EE    G++P+V T++ ++   S +G   +   +
Sbjct: 1034 YTYNALI---LHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSV 1090

Query: 298  FDDMVKAGIEPDIHVFSIL 316
            F  M+  G  P+   F+ L
Sbjct: 1091 FKKMMIVGCSPNAGTFAQL 1109



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/442 (22%), Positives = 191/442 (43%), Gaps = 51/442 (11%)

Query: 16   IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
            I NC       P ++TY T++  L ++ R         +++K  + PD +    ++    
Sbjct: 640  IMNC------SPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKK-FLSPDHVTLYTLLPGVV 692

Query: 76   ESGNVDEAMKIFQK-MKDSGCKPTTSTYNTLIKGYGNVGKPEESL--------------- 119
            + G V++A+KI  + +  SG + +   +  L++      + EE++               
Sbjct: 693  KDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDD 752

Query: 120  --------------------KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVY 159
                                KL    ++     P   +YN L+      N  E A  +  
Sbjct: 753  NLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFV 812

Query: 160  KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV----RPNERTCGIIVSGY 215
            +M  +G  P+  TYN L  A+   G++ R ++ LFE+ N  +    +PN  T  II+S  
Sbjct: 813  EMKNAGCCPNIFTYNLLLDAH---GKSKRIDE-LFELYNEMLCRGCKPNIITHNIIISAL 868

Query: 216  CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
             K  ++  A+   Y +   +  P    +  LI G L    S+   K    M ++  KP+ 
Sbjct: 869  VKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNC 928

Query: 276  VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
              ++ +++ +  AG +    ++F  M+K GI PD+  ++IL +     G    A      
Sbjct: 929  AIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEE 988

Query: 336  MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
            ++  G+ P+ V +  +I+G   + +++ A+S++ +M   GI+P L TY  L+  +G A  
Sbjct: 989  LKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGM 1048

Query: 396  PWRAEELLQVMEEKGVRPKKST 417
              +A ++ + ++  G+ P   T
Sbjct: 1049 VDQAGKMFEELQFMGLEPNVFT 1070



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/515 (19%), Positives = 211/515 (40%), Gaps = 76/515 (14%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            ++ L   G+  EA  +F  L +    PT++TY  L+  L ++ +    L L   +++ G 
Sbjct: 549  IDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGC 608

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYN----------------- 103
             P+++ FNA+++   ++  VD A+K+F +M    C P   TYN                 
Sbjct: 609  PPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFW 668

Query: 104  -----------------TLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
                             TL+ G    G+ E+++K++        ++ +++ +  L+    
Sbjct: 669  FYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECIL 728

Query: 147  SKNSIEEAWNVVYKMVAS------------------------------------GIQPDA 170
             +  IEEA +    +V +                                    G  P  
Sbjct: 729  IEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTP 788

Query: 171  VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
             +YN L         T  A ++  EM+N    PN  T  +++  + K   +++       
Sbjct: 789  ESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNE 848

Query: 231  MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSS 287
            M      PN++  N +I   +    S+ ++KAL L  E       P   T+  ++     
Sbjct: 849  MLCRGCKPNIITHNIIISALVK---SNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLK 905

Query: 288  AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
            AG   +  +IF++M     +P+  +++IL  G+ +AG    A  +   M K G+ P++  
Sbjct: 906  AGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKS 965

Query: 348  FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
            +T ++       ++  A+  +E++   G++P+  +Y  ++ G G++++   A  L   M+
Sbjct: 966  YTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMK 1025

Query: 408  EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
             +G+ P+  T   +   +   G+  +A ++ +  +
Sbjct: 1026 NRGISPELYTYNALILHFGNAGMVDQAGKMFEELQ 1060



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/447 (22%), Positives = 182/447 (40%), Gaps = 39/447 (8%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +FN +   G  PT  +Y   +    +    +  L    K++K G+ P     NA +
Sbjct: 420 EALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASL 479

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
            + +E G + EA  IF  + + G  P + TYN ++K Y   G+ +++ KLL  M  +   
Sbjct: 480 YSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSE-GC 538

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +P+    N L+        ++EAW +  ++    + P  VTYN L     + G+  +A  
Sbjct: 539 EPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALD 598

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +   M+ +   PN  T   ++   CK   ++ A++   RM  +   P+++ +N++I G +
Sbjct: 599 LFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLI 658

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG------ 305
               +         M++F + PD VT  T++      G +    +I  + V         
Sbjct: 659 KEGRAGYAFWFYHQMKKF-LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSN 717

Query: 306 -----------IEPDIHVFSILAKGYVRAGEPQKAESILTSMR----------------- 337
                      IE +I      A+G V     Q    IL  +R                 
Sbjct: 718 QVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDK 777

Query: 338 ---KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
                G HP    +  ++ G       + A+ ++ +M   G  PN+ TY  LL  +G++K
Sbjct: 778 FTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSK 837

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLV 421
           +     EL   M  +G +P   T  ++
Sbjct: 838 RIDELFELYNEMLCRGCKPNIITHNII 864



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 86/380 (22%), Positives = 159/380 (41%), Gaps = 46/380 (12%)

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
           ++  P  +L   +++SQ  N+     T N ++        +E+   V   M    I  + 
Sbjct: 98  SISDPNSALSYFKMVSQLPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNP 157

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQN-----NQVRPNERTCGIIVSGYCKEGNMEDAM 225
            TY T+ +A +  G   +A   L +M+      N    N     ++  G+CKE     A+
Sbjct: 158 NTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKE-----AL 212

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK------------- 272
           +   RM    + P++  +++L+      +D+  +   L  ME  G++             
Sbjct: 213 KVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVL 272

Query: 273 ----------------------PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
                                 PDVVT++ ++DA  +AG + K +E++  M  +  +PD+
Sbjct: 273 GRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDL 332

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             +  L   +   G+ +  +   + M   G  P+VV +T ++   C + K+ +A  + + 
Sbjct: 333 VTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDV 392

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M   GI PNL TY TL+ G    ++   A EL   ME  GV P   +  L  D +  +G 
Sbjct: 393 MRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGD 452

Query: 431 AREAKRVLKSAEEDRQSMPN 450
             +A    +  ++ R  MP+
Sbjct: 453 PEKALDTFEKMKK-RGIMPS 471


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 103/446 (23%), Positives = 210/446 (47%), Gaps = 39/446 (8%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  EA  + + ++  G +P+++TYT L+ A+ +   F   + ++ ++   G  P+
Sbjct: 155 LCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPN 214

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +IN     G VD+A +   ++   G +P T +Y T++KG     + E+  +L  
Sbjct: 215 IVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFA 274

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS------------------- 164
            M  +KN  PN+ T+++LVR +C    +E A  V+ +M                      
Sbjct: 275 EM-MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQ 333

Query: 165 ----------------GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
                           G  PD ++Y T+ +   +      A+++L EM      PNE T 
Sbjct: 334 GRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTF 393

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
              +   C++G +E A   + +M E     N+V +N+L+ GF        VD AL L   
Sbjct: 394 NTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFC---VQGRVDSALELFYS 450

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
              KP+ +T++T++    +A  +    E+  +M++    P++  F++L   + + G   +
Sbjct: 451 MPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDE 510

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  ++  M ++G  PN++ + T++ G  N    + A+ +   +   G++P++ TY +++ 
Sbjct: 511 AIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIG 570

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPK 414
                 +   A ++  ++++ G+RPK
Sbjct: 571 VLSREDRVEEAIKMFHIVQDLGMRPK 596



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 188/397 (47%), Gaps = 4/397 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   TYT ++  L  + R    LSL+  +   G +P  + +  ++ A  +S    +AM++
Sbjct: 143 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEV 202

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M+  GC P   TYN +I G    G+ +++ + L  +S     +P+  +Y  +++  C
Sbjct: 203 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSS-YGFQPDTVSYTTVLKGLC 261

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           +    E+   +  +M+     P+ VT++ L R + + G   RA Q+L +M  +    N  
Sbjct: 262 AAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTT 321

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
            C I+++  CK+G ++DA +FL  M      P+ + + +++KG    +  +   + L  M
Sbjct: 322 LCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEM 381

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
                 P+ VTF+T +      GL+ +   + + M + G E +I  ++ L  G+   G  
Sbjct: 382 VRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV 441

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             A  +  SM      PN + +TT+++G CNA ++  A  +  +M +    PN+ T+  L
Sbjct: 442 DSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVL 498

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           +  + +      A EL++ M E G  P   T   + D
Sbjct: 499 VSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLD 535



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 103/411 (25%), Positives = 189/411 (45%), Gaps = 9/411 (2%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  ++E+   P  +T+  LV    R    +  + ++ ++   G   ++ L N +IN   
Sbjct: 272 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTIC 331

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G VD+A +    M   GC P T +Y T++KG     + E++ +LL+ M + KN  PN+
Sbjct: 332 KQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR-KNCPPNE 390

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            T+N  +   C K  IE+A  ++ +M   G + + VTYN L   +   G    A ++ + 
Sbjct: 391 VTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYS 450

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M     +PN  T   +++G C    ++ A   L  M + +  PN+V FN L+  F     
Sbjct: 451 MP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGL 507

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D   + +  M E G  P+++T++T++D  ++     +  E+   +V  G+ PDI  +S 
Sbjct: 508 MDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSS 567

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           +     R    ++A  +   ++  G+ P  V++  ++   C       A+  +  M   G
Sbjct: 568 IIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG 627

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
             PN  TY TL+ G           +LL+ +  +GV  K      + + WR
Sbjct: 628 CMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKN-----LLEEWR 673



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 185/410 (45%), Gaps = 11/410 (2%)

Query: 51  LISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG 110
           L+ +    G  PD  L   +I      G   +A ++ +  + SG       YNTL+ GY 
Sbjct: 65  LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYC 124

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
             G+ + + +L+  M     V P+  TY  ++R  C +  + EA +++  M+  G QP  
Sbjct: 125 RYGQLDAARRLIASMP----VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV 180

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           VTY  L  A  +     +A ++L EM+     PN  T  +I++G C+EG ++DA  FL R
Sbjct: 181 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNR 240

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
           +      P+ V + +++KG    K  + V++    M E    P+ VTF  ++  +   G+
Sbjct: 241 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 300

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           + +  ++ + M   G   +  + +I+     + G    A   L +M  YG  P+ + +TT
Sbjct: 301 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 360

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           V+ G C A + + A  + ++M      PN  T+ T +    +     +A  L++ M E G
Sbjct: 361 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESI 460
                 T   + + +   G      RV  SA E   SMP K + I   ++
Sbjct: 421 CEVNIVTYNALVNGFCVQG------RV-DSALELFYSMPCKPNTITYTTL 463



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/342 (23%), Positives = 162/342 (47%), Gaps = 6/342 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  +G+  +A    N +   G  P  I+YTT++  L R +R++    L+ ++ +   
Sbjct: 327 INTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNC 386

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + FN  I    + G +++A  + ++M + GC+    TYN L+ G+   G+ + +L+
Sbjct: 387 PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE 446

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M      KPN  TY  L+   C+   ++ A  ++ +M+     P+ VT+N L   +
Sbjct: 447 LFYSMP----CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 502

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G    A +++ +M  +   PN  T   ++ G   + N E+A+  L+ +    V P++
Sbjct: 503 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDI 562

Query: 241 VVFNSLIKGFLDIKDS-DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           V ++S+I G L  +D  +   K   ++++ G++P  V ++ I+ A           + F 
Sbjct: 563 VTYSSII-GVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFA 621

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
            MV  G  P+   +  L +G       ++   +L  +   GV
Sbjct: 622 YMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 141/305 (46%), Gaps = 9/305 (2%)

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           N  +R   +++ + EA  +V +  + G  PD      L R   + G T  A ++L   + 
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
           +    +      +V+GYC+ G ++ A R +  M    V P+   +  +I+G     D   
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLC---DRGR 160

Query: 259 VDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
           V +AL+L+++    G +P VVT++ +++A   +   G+  E+ D+M   G  P+I  +++
Sbjct: 161 VGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNV 220

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           +  G  R G    A   L  +  YG  P+ V +TTV+ G C A + +    ++ +M E  
Sbjct: 221 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 280

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
             PN  T++ L+  +       RA ++L+ M   G     +   +V ++    G   +A 
Sbjct: 281 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAF 340

Query: 436 RVLKS 440
           + L +
Sbjct: 341 QFLNN 345


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 201/416 (48%), Gaps = 1/416 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  EA  I N +I  G +P  I Y  L+  L +  +      L++++ K G +PD+  
Sbjct: 363 EGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFT 422

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ ++    +  + D A ++  +M++SG  P   TY  +I G    G+ +E+  LL+ M 
Sbjct: 423 YHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMI 482

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +  +KPN   Y  L+     +  I  A   +  M  + + PD   YN+L +  +  G  
Sbjct: 483 SE-GLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRI 541

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             AE+   ++Q   + P+E T   ++ GYCK  N+E A + L +M    + PN   +  L
Sbjct: 542 EEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDL 601

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           ++G+    D + V   L  M   G KPD   +  ++   S +  M     +  ++ K G+
Sbjct: 602 LEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGL 661

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD+H++S L  G  +  + +KA  +L  M K G+ P +V +  +I G+C +  + RA +
Sbjct: 662 VPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARN 721

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
           +++ +   G+ PN  TY  L+ G  +      A +L + M ++G+ P      ++A
Sbjct: 722 VFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLA 777



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/423 (23%), Positives = 215/423 (50%), Gaps = 1/423 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L   G+  EA  + + +   G +P ++ Y TLV    ++ +      +++++   G+
Sbjct: 322 MNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGV 381

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ I+++ +I    + G +  A K+  +M   G +P T TY+ L++G+      + + +
Sbjct: 382 QPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFE 441

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M ++  + PN  TY I++   C     +EA N++ +M++ G++P+A  Y  L   +
Sbjct: 442 LLNEM-RNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGH 500

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++ G    A + L  M    V P+      ++ G    G +E+A  +  ++++  + P+ 
Sbjct: 501 SKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDE 560

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             ++ LI G+   ++ +  D+ L  M   G+KP+  T++ +++ +  +    K   I   
Sbjct: 561 FTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQS 620

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+ +G +PD H++ I+ +   R+   + A  +LT + K G+ P++ +++++ISG C    
Sbjct: 621 MLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMAD 680

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M++A+ + ++M + G+ P +  Y  L+ G+  +    RA  +   +  KG+ P   T   
Sbjct: 681 MEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTA 740

Query: 421 VAD 423
           + D
Sbjct: 741 LID 743



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 192/398 (48%), Gaps = 1/398 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P + TY+T + A  + + F +   +  ++ +     + + +N MI+    SG V+EA
Sbjct: 240 GIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA 299

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
               ++M D G  P   TY  L+ G    G+ +E+  LL  MS    +KPN   Y  LV 
Sbjct: 300 FGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSC-SGLKPNVVVYATLVD 358

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +  +    EA++++ +M+++G+QP+ + Y+ L R   + G+  RA ++L EM     RP
Sbjct: 359 GFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRP 418

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   ++ G+ +  + + A   L  M+   + PN   +  +I G     +S      L
Sbjct: 419 DTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLL 478

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M   G+KP+   ++ ++   S  G +    E  ++M KA + PD+  ++ L KG    
Sbjct: 479 EEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTV 538

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G  ++AE     ++K G+ P+   ++ +I G+C    +++A  + ++M   G+ PN  TY
Sbjct: 539 GRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTY 598

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             LL GY ++    +   +LQ M   G +P      +V
Sbjct: 599 TDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIV 636



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 199/409 (48%), Gaps = 2/409 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EA  +   +I EG +P    Y  L+   +++         +  + K  +
Sbjct: 462 INGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANV 521

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +N++I   S  G ++EA + + +++  G  P   TY+ LI GY      E++ +
Sbjct: 522 LPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQ 581

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LLQ M  +  +KPN  TY  L+  +   N  E+  +++  M+ SG +PD   Y  + R  
Sbjct: 582 LLQQM-LNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNL 640

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++      A  +L E++ N + P+      ++SG CK  +ME A+  L  M +  + P +
Sbjct: 641 SRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGI 700

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N+LI GF    D          +   G+ P+ VT++ ++D     G +    +++ D
Sbjct: 701 VCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKD 760

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  GI PD  V+++LA G   A + ++A  +   M   G + +V +F+T++ G+C   +
Sbjct: 761 MLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRG-YAHVSLFSTLVRGFCKRGR 819

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
           +Q    +   M +  I PN +T E ++  +G+A +   A  +   +++K
Sbjct: 820 LQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQK 868



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/504 (23%), Positives = 229/504 (45%), Gaps = 8/504 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  PT      L+  L R    + +  L   +E  G+ PD   ++  + A  ++ + D A
Sbjct: 205 GLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAA 264

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            K+F++M+   C     TYN +I G    G  EE+    + M  D  + P+  TY  L+ 
Sbjct: 265 KKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMV-DYGLSPDAFTYGALMN 323

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C    ++EA  ++ +M  SG++P+ V Y TL   + + G+   A  +L EM +  V+P
Sbjct: 324 GLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQP 383

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N+     ++ G CK G +  A + L  M ++   P+   ++ L++G     D DG  + L
Sbjct: 384 NKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELL 443

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M   G+ P+  T+  +++     G   +   + ++M+  G++P+  +++ L  G+ + 
Sbjct: 444 NEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKE 503

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G    A   L +M K  V P++  + ++I G     +++ A   Y ++ + G+ P+  TY
Sbjct: 504 GHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTY 563

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             L+ GY + +   +A++LLQ M   G++P   T   + + +       +   +L+S   
Sbjct: 564 SGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLG 623

Query: 444 DRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIP--GVVSSEHNGSSAAKIRSQIVLRSD 501
                 N    I + ++ R +N+  +     ++   G+V   H  SS   + S +   +D
Sbjct: 624 SGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSS---LISGLCKMAD 680

Query: 502 TVWTATKSLFVNTYGSGVQPMVVC 525
                   L       G++P +VC
Sbjct: 681 --MEKAVGLLDEMAKEGLEPGIVC 702



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 166/388 (42%), Gaps = 34/388 (8%)

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           + + + +++   ++G+V  A ++   M D G  PT    N L+K        E   KL  
Sbjct: 175 TAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKG 234

Query: 124 LMS----------------------------------QDKNVKPNDRTYNILVRAWCSKN 149
            M                                   + ++   N+ TYN+++   C   
Sbjct: 235 FMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 294

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
           ++EEA+    +MV  G+ PDA TY  L     + G    A+ +L EM  + ++PN     
Sbjct: 295 AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYA 354

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            +V G+ KEG   +A   L  M    V PN +++++LI+G   I       K L  M + 
Sbjct: 355 TLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKV 414

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G +PD  T+  +M             E+ ++M  +GI P+ + + I+  G  + GE ++A
Sbjct: 415 GHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEA 474

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
            ++L  M   G+ PN  M+  +I G      +  A    E M +  + P+L  Y +L+ G
Sbjct: 475 GNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKG 534

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKST 417
                +   AEE    ++++G+ P + T
Sbjct: 535 LSTVGRIEEAEEYYAQVQKRGLVPDEFT 562



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/181 (20%), Positives = 84/181 (46%), Gaps = 2/181 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           + +EG  P ++ Y  L+    R        ++   +   G+ P+ + + A+I+   ++G+
Sbjct: 691 MAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGD 750

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           + +A  +++ M D G  P    YN L  G  +    E++L L + M        +   ++
Sbjct: 751 ITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVS--LFS 808

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            LVR +C +  ++E   +++ M+   I P+A T   +   + + G+   A ++  E+Q  
Sbjct: 809 TLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQK 868

Query: 200 Q 200
           +
Sbjct: 869 K 869


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 206/448 (45%), Gaps = 37/448 (8%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P + TYT ++ AL R     +  ++++++ + G++P  + +N +++A  +SG V+EA ++
Sbjct: 209 PDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRL 268

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M +   +P+  T+  LI G     +  E   +LQ M Q   + PN+  YN ++   C
Sbjct: 269 KGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEM-QGFGITPNEVIYNEMIGWHC 327

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ--------- 197
            K    EA  +  +MV+ GI+   VTYN +A+A  + GE   AE++L EM          
Sbjct: 328 RKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCS 387

Query: 198 --NNQV-------------------------RPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
             N+ V                         +PN+      +   CK G  E+A    ++
Sbjct: 388 LFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQ 447

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
           +    +  N+   N+LI G     +     K L  M   GV+ D +T++ ++     A  
Sbjct: 448 VLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASK 507

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           M +  ++ DDM+K G +PD+  F+I    Y   G+ ++   +L  M+  G+ P++V + T
Sbjct: 508 MDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGT 567

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I G+C A  M +A     ++ + G+ PN   Y  L+ GYG       A  +L  M+  G
Sbjct: 568 IIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNG 627

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVL 438
           ++P   T   +       GL  E K V 
Sbjct: 628 IQPTPVTYNSLMYWMCHAGLVEEVKAVF 655



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 211/483 (43%), Gaps = 70/483 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   G+  EA  +   ++E   RP+++T+  L++ L R ++F  + +++ +++  G+
Sbjct: 253 MDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGI 312

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ +++N MI      G+  EA+K+F +M   G K T  TYN + K     G+ E + K
Sbjct: 313 TPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEK 372

Query: 121 LLQLM-----------------------------------SQDKNVKPNDRTYNILVRAW 145
           +L  M                                      + +KPND      ++  
Sbjct: 373 ILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQEL 432

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C     EEA  + ++++  G+  +  T N L     Q      A ++L  M N+ V  + 
Sbjct: 433 CKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDR 492

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T  I++ G CK   M++A++    M +    P+L  FN  +  + ++   + +   L  
Sbjct: 493 ITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQ 552

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M+  G+KPD+VT+ TI+D +  A  M K  E   +++K G+ P+  +++ L  GY R G 
Sbjct: 553 MKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGN 612

Query: 326 PQKAESILTSMRKYGVHPN-----------------------------------VVMFTT 350
              A  IL +M+  G+ P                                    V+ +T 
Sbjct: 613 ISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTI 672

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I G+C   K+  A+  +++M   GI PN  TY TL++ Y ++     A +L   M   G
Sbjct: 673 IIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLG 732

Query: 411 VRP 413
           + P
Sbjct: 733 IVP 735



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 206/425 (48%), Gaps = 43/425 (10%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQK----------------------- 43
           KG   EA  +F+ ++ +G + T++TY  +  AL ++                        
Sbjct: 329 KGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSL 388

Query: 44  -------------RFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
                        R   +L LI ++    +KP+  L  A I    +SG  +EA +I+ ++
Sbjct: 389 FNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQV 448

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
              G     +T N LI G       +E+ K+L+ M  +  V+ +  TYNI+++  C  + 
Sbjct: 449 LGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMV-NSGVELDRITYNIMIQGCCKASK 507

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           ++EA  +   M+  G +PD  T+N     Y   G+      +L +M++  ++P+  T G 
Sbjct: 508 MDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGT 567

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL---DIKDSDGVDKALTLME 267
           I+ GYCK  +M  A  +L  + +  + PN V++N+LI G+    +I D+ G+   L  M+
Sbjct: 568 IIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGI---LDTMK 624

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
             G++P  VT++++M     AGL+ + + +F   +   IE  +  ++I+ +G+ + G+  
Sbjct: 625 YNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKID 684

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           +A      M   G+ PN + +TT++  +  +   + A  ++++M  +GI P+  +Y TL+
Sbjct: 685 EAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLI 744

Query: 388 WGYGE 392
            G+ E
Sbjct: 745 SGFCE 749



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 156/317 (49%), Gaps = 1/317 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK  EA  I+  ++ +G    + T   L+  L +    K    ++  +   G++ D
Sbjct: 432 LCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELD 491

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I +N MI  C ++  +DEA+++   M   G KP   T+N  +  Y N+GK EE L LL 
Sbjct: 492 RITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLD 551

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + + +KP+  TY  ++  +C    + +A   + +++ +G++P+AV YN L   Y + 
Sbjct: 552 QM-KSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRN 610

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A  +L  M+ N ++P   T   ++   C  G +E+      +    ++   ++ +
Sbjct: 611 GNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGY 670

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
             +I+GF  I   D        M   G+ P+ +T++T+M A+S +G   +  ++FD+MV 
Sbjct: 671 TIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVS 730

Query: 304 AGIEPDIHVFSILAKGY 320
            GI PD   ++ L  G+
Sbjct: 731 LGIVPDSVSYNTLISGF 747



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 168/366 (45%), Gaps = 20/366 (5%)

Query: 68  NAMINACSES---GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           + ++ AC  S   G++  A   F ++   G  P+  T + L++  G  G+ + + K+   
Sbjct: 141 DLLVRACLNSPAPGSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGE 200

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M   K V P+  TY  +++A C    I+ A+ ++ ++  SGIQP  VTYN L  A  + G
Sbjct: 201 MRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSG 260

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
               A ++   M   +VRP+  T GI++SG  +     +    L  M+   + PN V++N
Sbjct: 261 RVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYN 320

Query: 245 SLI-----KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            +I     KG           +AL L +E    G+K  VVT++ I  A    G M   ++
Sbjct: 321 EMIGWHCRKGH--------CSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEK 372

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRA-GEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           I D+M+ AG+     +F+ +   ++R  G       ++  M    + PN  + T  I   
Sbjct: 373 ILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQEL 432

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C + K + A  I+ ++   G+  N+ T   L+ G  +      A ++L+ M   GV   +
Sbjct: 433 CKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDR 492

Query: 416 STIQLV 421
            T  ++
Sbjct: 493 ITYNIM 498



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/421 (24%), Positives = 178/421 (42%), Gaps = 52/421 (12%)

Query: 47  SILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS-GCKPTTSTYNTL 105
           + L L ++     +K  SIL  A+   C   G +D A K+F +M+D     P   TY  +
Sbjct: 162 AFLELSARGASPSIKTCSILVEAL--GCG--GQLDVARKVFGEMRDGKTVAPDVHTYTAM 217

Query: 106 IKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
           IK     G+ + +  +L  + +   ++P   TYN+L+ A C    +EEA+ +  +MV   
Sbjct: 218 IKALCRAGEIDAAFAMLAELRR-SGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGR 276

Query: 166 IQPDAVTYNTLARAYA---QYGETYRAEQMLFEMQNNQVRPNE----------------- 205
           ++P  VT+  L    A   Q+GE      +L EMQ   + PNE                 
Sbjct: 277 VRPSIVTFGILISGLARGQQFGEV---GAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCS 333

Query: 206 ------------------RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
                              T  +I    CKEG ME A + L  M    +  +  +FNS++
Sbjct: 334 EALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVV 393

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
              L  + +  +D  L L+ E     +KP+    +  +     +G   +  EI+  ++  
Sbjct: 394 AWHL--RGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGK 451

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+  ++   + L  G  +    ++A  +L +M   GV  + + +  +I G C A KM  A
Sbjct: 452 GLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEA 511

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           + + + M + G  P+L T+   L  Y    +      LL  M+ +G++P   T   + D 
Sbjct: 512 IQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDG 571

Query: 425 W 425
           +
Sbjct: 572 Y 572



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/327 (20%), Positives = 124/327 (37%), Gaps = 46/327 (14%)

Query: 115 PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYN 174
           P  S  LLQ +  D+   P+ R    LV      N +  A   +     +       T +
Sbjct: 91  PRVSTLLLQSLVADRASLPSARR---LVSRLLRFNPLSVAAAAIADSHCTA------TAD 141

Query: 175 TLARAYAQY---GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
            L RA       G   RA     E+      P+ +TC I+V      G ++ A +    M
Sbjct: 142 LLVRACLNSPAPGSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEM 201

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
           ++ +                                   V PDV T++ ++ A   AG +
Sbjct: 202 RDGKT----------------------------------VAPDVHTYTAMIKALCRAGEI 227

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
                +  ++ ++GI+P +  +++L     ++G  ++A  +   M +  V P++V F  +
Sbjct: 228 DAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGIL 287

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           ISG     +     ++ ++M   GI PN   Y  ++  +        A +L   M  KG+
Sbjct: 288 ISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGI 347

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVL 438
           +    T  L+A +    G    A+++L
Sbjct: 348 KQTVVTYNLIAKALCKEGEMEHAEKIL 374


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 208/435 (47%), Gaps = 1/435 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA  +   L E+G +  ++TY TLV    R ++F   + L++++ + G  P 
Sbjct: 263 LCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPT 322

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
               + +++   + GN+D A  +  K+   G  P    YN LI      G+  +  +LL 
Sbjct: 323 EAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCK-GEDLDKAELLY 381

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
                 N+  ND TY+IL+ ++C +  ++ A +   +M+  GI+     YN+L   + ++
Sbjct: 382 KNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKF 441

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   AE +  +M N  + P   T   ++SGYCK+  +E A +    M E E+ P++  F
Sbjct: 442 GDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTF 501

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            +LI G     +     K    M E  +KP  VT++ +++ +  A  M K  E+ +DM+ 
Sbjct: 502 TALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLH 561

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ PD + +  L  G    G    A+  +  + K  +  N + ++ ++ G+C   ++  
Sbjct: 562 NGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTE 621

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+S   +M + GIN +L  +  L+ G  + +   R   LL+ M ++G+RP       + D
Sbjct: 622 ALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMID 681

Query: 424 SWRAIGLAREAKRVL 438
           ++   G  +++   L
Sbjct: 682 AYSKEGSFKKSGECL 696



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/407 (24%), Positives = 197/407 (48%), Gaps = 2/407 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G    A   F  +IE+G R T+  Y +L+    +     +   L +K+  +G++P +  
Sbjct: 406 RGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATT 465

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F  +I+   +   V++A K++++M +    P+  T+  LI G  +  +  E+ KL   M 
Sbjct: 466 FTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMV 525

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + K +KP + TYN+++  +C  +++++A+ ++  M+ +G+ PD  TY  L       G  
Sbjct: 526 ERK-IKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRV 584

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+  + ++    ++ NE     ++ GYC +G + +A+     M +  ++ +LV    L
Sbjct: 585 SAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVL 644

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G +  +D   +   L  M + G++PD V +++++DA+S  G   K  E  D MV    
Sbjct: 645 IDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKC 704

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P++  ++    G  + GE  +A  +   M    + PN V +   +        M+ A  
Sbjct: 705 FPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATD 764

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           ++ +M + G+  N  TY  L+ G+ +  +   A ++L  M E G+ P
Sbjct: 765 LHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFP 810



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/417 (23%), Positives = 189/417 (45%), Gaps = 7/417 (1%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           + N ++E G  PT    + LV  L ++    S   L+ K+ + G  P+  ++NA+INA  
Sbjct: 310 LMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALC 369

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           +  ++D+A  +++ M          TY+ LI  +   G  + +      M +D  ++   
Sbjct: 370 KGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIED-GIRETI 428

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
             YN L+   C    +  A  +  KM+  G++P A T+ TL   Y +  +  +A ++  E
Sbjct: 429 YPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYRE 488

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M   ++ P+  T   ++ G C    M +A +    M E ++ P  V +N +I+G+     
Sbjct: 489 MNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYC---K 545

Query: 256 SDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +  +DKA  L+E+    G+ PD  T+  ++    S G +   ++  DD+ K  ++ +   
Sbjct: 546 AHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMC 605

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           +S L  GY   G   +A S    M + G++ ++V    +I G      M+R   + +KM 
Sbjct: 606 YSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMY 665

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           + G+ P+   Y +++  Y +     ++ E L +M  +   P   T     +    +G
Sbjct: 666 DQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVG 722



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/399 (22%), Positives = 186/399 (46%), Gaps = 7/399 (1%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           + +  LV +  +  R    + ++  +  + + P+    +A++N            ++F +
Sbjct: 149 LGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDE 208

Query: 90  MKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             ++G KP   T + +I+      +  + +E +  ++    D ++     TYN+L+   C
Sbjct: 209 SVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIV----TYNVLIHGLC 264

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               + EA  V   +   G++ D VTY TL   + +  +      ++ EM      P E 
Sbjct: 265 KGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEA 324

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               +V G  K+GN++ A   + ++      PNL V+N+LI      +D D  +     M
Sbjct: 325 AVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNM 384

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
               +  + VT+S ++D++   G++   +  F  M++ GI   I+ ++ L  G+ + G+ 
Sbjct: 385 HSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDL 444

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             AE + T M   G+ P    FTT+ISG+C  +++++A  +Y +M E  I P++ T+  L
Sbjct: 445 SAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTAL 504

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           ++G     +   A +L   M E+ ++P + T  ++ + +
Sbjct: 505 IYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGY 543



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 98/424 (23%), Positives = 179/424 (42%), Gaps = 45/424 (10%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +F+ ++E   +PT +TY  ++    +         L+  +  +G+ PD+  +  +I
Sbjct: 516 EASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLI 575

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL------------ 119
           +    +G V  A      +     K     Y+ L+ GY   G+  E+L            
Sbjct: 576 SGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGIN 635

Query: 120 --------------------KLLQLMSQ--DKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
                               +L  L+ +  D+ ++P+   Y  ++ A+  + S +++   
Sbjct: 636 MDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGEC 695

Query: 158 VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
           +  MV     P+ VTY        + GE  RA  +  +M    + PN  T G  +    K
Sbjct: 696 LDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTK 755

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
           EGNM++A    + M +  +  N   +N LI+GF  +       K L+ M E G+ PD +T
Sbjct: 756 EGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCIT 814

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           +STI+     +G +G   E++D M++ G+EPD   F++L  G    G   KA  +   M 
Sbjct: 815 YSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDML 874

Query: 338 KYGVHPNVVM---------FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL-L 387
             G+ P  ++            ++ G C   ++  A+ +Y  M    +  +L+ ++ L L
Sbjct: 875 SRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRAVKLSLEMWKCLYL 934

Query: 388 WGYG 391
             YG
Sbjct: 935 LSYG 938



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 105/456 (23%), Positives = 185/456 (40%), Gaps = 37/456 (8%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P L  Y  L+ AL + +       L   +    +  + + ++ +I++  + G +D A
Sbjct: 353 GFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVA 412

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
              F +M + G + T   YN+LI G+   G    + + L     ++ ++P   T+  L+ 
Sbjct: 413 ESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAA-EFLYTKMINEGLEPTATTFTTLIS 471

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +C    +E+A+ +  +M    I P   T+  L        E   A ++  EM   +++P
Sbjct: 472 GYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKP 531

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI------KD-- 255
            E T  +++ GYCK  NM+ A   L  M    + P+   +  LI G          KD  
Sbjct: 532 TEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFI 591

Query: 256 SDGVDKALTL---------------------------MEEFGVKPDVVTFSTIMDAWSSA 288
            D   K L L                           M + G+  D+V  + ++D     
Sbjct: 592 DDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQ 651

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
             M +   +   M   G+ PD  +++ +   Y + G  +K+   L  M      PNVV +
Sbjct: 652 QDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTY 711

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           T  ++G C   ++ RA  ++EKM    I+PN  TY   L    +      A +L   M  
Sbjct: 712 TAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEM-L 770

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           KG+    +T  ++   +  +G   EA +VL    E+
Sbjct: 771 KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTEN 806



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 87/421 (20%), Positives = 175/421 (41%), Gaps = 19/421 (4%)

Query: 16  IFNCL-IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL-------- 66
            FN L + +    T  ++  LV AL + K F    SL+  +   G  P  +         
Sbjct: 82  FFNFLGLHKNMNHTTTSFAILVHALVQNKLFWPANSLLHTLLLRGSDPKFVFEKFLESHK 141

Query: 67  ---------FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
                    F+ ++++  ++  V +A+ + + M  +   P   T + ++ G   + K   
Sbjct: 142 QCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFIL 201

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
             ++    S +  VKP+  T + ++R+ C       A   +  M ++      VTYN L 
Sbjct: 202 VWEVFD-ESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLI 260

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               + G    A ++   ++   ++ +  T   +V G+C+    +D +  +  M EL   
Sbjct: 261 HGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFV 320

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P     + L+ G     + D     +  +  FG  P++  ++ +++A      + K + +
Sbjct: 321 PTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELL 380

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           + +M    +  +   +SIL   + + G    AES    M + G+   +  + ++I+G C 
Sbjct: 381 YKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCK 440

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              +  A  +Y KM   G+ P   T+ TL+ GY +  Q  +A +L + M EK + P   T
Sbjct: 441 FGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYT 500

Query: 418 I 418
            
Sbjct: 501 F 501



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/231 (21%), Positives = 105/231 (45%), Gaps = 28/231 (12%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L   G+   A ++F  ++     P  +TY   + +LT++   K    L  ++ K G+
Sbjct: 715 MNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GL 773

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             ++  +N +I    + G + EA K+  +M ++G  P   TY+T+I  +   G    +++
Sbjct: 774 LANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVE 833

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M + K V+P+   +N+L+   C   ++++A+ +   M++ G++P            
Sbjct: 834 LWDTMLR-KGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKP------------ 880

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
                     + + ++Q   +      C  ++ G C  G ++ A+R  + M
Sbjct: 881 ----------RQILQLQKRDL----GVCNFLMHGGCVTGEVDTALRLYHSM 917


>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 849

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 225/476 (47%), Gaps = 39/476 (8%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  I   + +    P  ITY  LVAA  R        ++I  +   G+ P++I +  +I
Sbjct: 361 EALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVI 420

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL--------- 122
           NA  ++G+ D+A+++F +MK+ GC P   TYN ++   G   + E+ +K+L         
Sbjct: 421 NAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCP 480

Query: 123 -----------------------QLMSQDKN--VKPNDRTYNILVRAWCSKNSIEEAWNV 157
                                  Q++ + KN   +P+  T+N L+ A+    S  +   +
Sbjct: 481 PDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKM 540

Query: 158 VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
             +MVA+G  P   TYN L  A A+ G    AE ++ +M+    +PNE +  +++  Y K
Sbjct: 541 YGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSK 600

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
            GN+    +    + +  V P+ ++  +L+      +   G+++A   ++  G K D+V 
Sbjct: 601 AGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVV 660

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
            ++++  +     + K  E+ D +  +G++P++  ++ L   Y R G+  KAE +L  ++
Sbjct: 661 INSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQ 720

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
             G+ P+VV + TVI G+C    +Q A+ I  +M   G+ P   T+ T +  Y       
Sbjct: 721 NSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFA 780

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE-----DRQSM 448
            A+E+++ M E G  P + T ++V D +      +EA   +   +E     D QS+
Sbjct: 781 EADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEAMDFVSKIKEIDISFDDQSL 836



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 225/474 (47%), Gaps = 43/474 (9%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDGMKPDSIL 66
           GK   A  IF  + E G  PTL+TY  ++    +  R +  IL L+ ++   G++ D   
Sbjct: 251 GKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFT 310

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
              +I+AC   G +DEA + F  +K +G KP T+TYN++++ +G  G   E+L +L+ M 
Sbjct: 311 CTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEM- 369

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +D N +P+  TYN LV A+      +E   V+  M + G+ P+A+TY T+  AY + G+ 
Sbjct: 370 EDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDA 429

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A ++  +M+     PN  T   ++    K    ED ++ L  MK     P+ + +N++
Sbjct: 430 DKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTM 489

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +    +      V + L  M+  G +PD  TF+T++ A+   G      +++ +MV AG 
Sbjct: 490 LAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGF 549

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN---------------------- 344
            P I  ++ L     R G  + AES++  MRK G  PN                      
Sbjct: 550 TPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEK 609

Query: 345 --------------VVMFTTVISGW-CNAVK-MQRAMSIYEKMCEIGINPNLKTYETLLW 388
                         +++ T V++ + C  +K M+RA   + ++   G   ++    ++L 
Sbjct: 610 VEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGMERA---FHQLQNNGYKLDMVVINSMLS 666

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
            +   ++  +A E+L V+   G++P   T   + D +  +G   +A+ +LK  +
Sbjct: 667 MFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQ 720



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/432 (22%), Positives = 203/432 (46%), Gaps = 1/432 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   EA   F+ L   G++P   TY +++    +   +   L+++ ++E +  +PD+I 
Sbjct: 321 EGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAIT 380

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N ++ A   +G  DE   +   M   G  P   TY T+I  YG  G  +++L++   M 
Sbjct: 381 YNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMK 440

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +   V PN  TYN ++     ++  E+   ++  M  +G  PD +T+NT+     + G+ 
Sbjct: 441 ELGCV-PNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQ 499

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
               Q+L EM+N    P++ T   ++S Y + G+  D  +    M      P +  +N+L
Sbjct: 500 KFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNAL 559

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +       +    +  +  M + G KP+  ++S ++  +S AG +   +++  ++    +
Sbjct: 560 LNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHV 619

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P   +   L     +  + +  E     ++  G   ++V+  +++S +    K+++A  
Sbjct: 620 FPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHE 679

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           + + +   G+ PNL TY +L+  Y      W+AEE+L+ ++  G+ P   +   V   + 
Sbjct: 680 MLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFC 739

Query: 427 AIGLAREAKRVL 438
             GL +EA R+L
Sbjct: 740 KKGLVQEAIRIL 751



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 182/405 (44%), Gaps = 36/405 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  +F  + E G  P + TY  ++  L ++ R + ++ ++  ++ +G  PD I +
Sbjct: 427 GDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITW 486

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N M+  C E G      ++ ++MK+ G +P   T+NTLI  YG  G   +  K+   M  
Sbjct: 487 NTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVA 546

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET- 186
                P   TYN L+ A   + + + A +VV  M   G +P+  +Y+ L   Y++ G   
Sbjct: 547 -AGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVR 605

Query: 187 ----------------------------YRAEQM------LFEMQNNQVRPNERTCGIIV 212
                                       Y+  Q+        ++QNN  + +      ++
Sbjct: 606 GLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVVINSML 665

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           S + +   +E A   L  +    + PNLV +NSLI  +  + D    ++ L  ++  G+ 
Sbjct: 666 SMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGIS 725

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           PDVV+++T++  +   GL+ +   I  +M   G++P    F+     Y   G   +A+ +
Sbjct: 726 PDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEADEV 785

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
           +  M ++G  PN + +  VI G+  A K + AM    K+ EI I+
Sbjct: 786 IRYMIEHGCMPNELTYKIVIDGYIKAKKHKEAMDFVSKIKEIDIS 830



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 93/404 (23%), Positives = 180/404 (44%), Gaps = 2/404 (0%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           +V  L R+ ++     L   +  +    D      +++A + +G    A++IF+KMK++G
Sbjct: 208 MVKMLGRESQYSIASKLFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETG 267

Query: 95  CKPTTSTYNTLIKGYGNVGKP-EESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
             PT  TYN ++  YG +G+     L+LL  M + K ++ ++ T   ++ A   +  ++E
Sbjct: 268 LDPTLVTYNVMLDVYGKMGRAWSMILELLDEM-RSKGLEFDEFTCTTVISACGREGILDE 326

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A      +  +G +P   TYN++ + + + G    A  +L EM++N   P+  T   +V+
Sbjct: 327 ARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVA 386

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
            Y + G  ++    +  M    V PN + + ++I  +    D+D   +    M+E G  P
Sbjct: 387 AYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVP 446

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           +V T++ ++             +I  DM   G  PD   ++ +       G+ +    +L
Sbjct: 447 NVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVL 506

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M+  G  P+   F T+IS +           +Y +M   G  P + TY  LL      
Sbjct: 507 REMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARR 566

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
                AE ++  M +KG +P +++  L+   +   G  R  ++V
Sbjct: 567 GNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKV 610



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 1/177 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++ V   K  +AH + + +   G +P L+TY +L+    R         ++  ++  G+
Sbjct: 665 LSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGI 724

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + +N +I    + G V EA++I  +M  +G +P   T+NT +  Y   G   E+ +
Sbjct: 725 SPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEADE 784

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +++ M +     PN+ TY I++  +      +EA + V K+    I  D  +   LA
Sbjct: 785 VIRYMIE-HGCMPNELTYKIVIDGYIKAKKHKEAMDFVSKIKEIDISFDDQSLKKLA 840



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 7/182 (3%)

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKC----QEIFDDMVKAGIEPDIHVFSILAKGYV 321
           M+E G+ P +VT++ ++D +   G MG+      E+ D+M   G+E D    + +     
Sbjct: 263 MKETGLDPTLVTYNVMLDVY---GKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACG 319

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           R G   +A      ++  G  P    + +++  +  A     A++I ++M +    P+  
Sbjct: 320 REGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAI 379

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY  L+  Y  A        ++  M  KGV P   T   V +++   G A +A  V    
Sbjct: 380 TYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQM 439

Query: 442 EE 443
           +E
Sbjct: 440 KE 441


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 107/434 (24%), Positives = 210/434 (48%), Gaps = 24/434 (5%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G + ++ TY  ++  L ++   +   SL +++++ G  PD + +N++I+   + G +DE 
Sbjct: 51  GIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDEC 110

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + IF++MKD+ C P   TYN LI  +    +  ++ + L  M  +  +KPN  TY+  + 
Sbjct: 111 ICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKAN-GLKPNVVTYSTFID 169

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           A+C +  ++EA      M    + P+  TY +L  A  + G    A +++ E+    ++ 
Sbjct: 170 AFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKL 229

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  T   ++ G C+EG M++A      M    V PN   + +L+ GF+  K+ +     L
Sbjct: 230 NVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDIL 289

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M+E  +KPD++ + TI+    +   + + + +  ++ ++GI  +  +++ L   Y ++
Sbjct: 290 KEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKS 349

Query: 324 GEPQKAESILTSMRKY-----------------------GVHPNVVMFTTVISGWCNAVK 360
           G+  +A ++L  M                          G+ P+ + +T +I G      
Sbjct: 350 GQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGN 409

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +Q A+++ ++M EIG+  +L  Y  L+WG   + Q  +A  LL  M  KGV P +     
Sbjct: 410 LQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMC 469

Query: 421 VADSWRAIGLAREA 434
           +   + A+G   EA
Sbjct: 470 LIKKYYALGKVDEA 483



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 183/349 (52%), Gaps = 9/349 (2%)

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP S   NA+++  S+ G  D + K F+ M  +G K +  TYN +I      G  E +  
Sbjct: 20  KPRSC--NALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARS 77

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M ++    P+  TYN L+        ++E   +  +M  +   PD +TYN L   +
Sbjct: 78  LFTQM-KEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCF 136

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            ++    +A + L EM+ N ++PN  T    +  +CKEG +++A++F   M+ + + PN 
Sbjct: 137 CKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNE 196

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             + SLI        +  + +AL L+EE    G+K +VVT++ ++D     G M + +E+
Sbjct: 197 FTYTSLIDANC---KAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEV 253

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F  M+ AG+ P+   ++ L  G+++A E + A+ IL  M++  + P+++++ T++ G CN
Sbjct: 254 FRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCN 313

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
             +++ A  +  ++ E GIN N   Y TL+  Y ++ Q   A  LL+ M
Sbjct: 314 ESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM 362



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 189/402 (47%), Gaps = 30/402 (7%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   E   IF  + +    P +ITY  L+    + +R       + +++ +G+KP+ + +
Sbjct: 105 GLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTY 164

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +  I+A  + G + EA+K F  M+     P   TY +LI      G   E+LKL++ + Q
Sbjct: 165 STFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQ 224

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              +K N  TY  L+   C +  ++EA  V   M+ +G+ P+  TY  L   + +  E  
Sbjct: 225 -AGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEME 283

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A+ +L EM+   ++P+    G I+ G C E  +E+A   +  +KE  ++ N V++ +L+
Sbjct: 284 YAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLM 343

Query: 248 KGFLDIKDSDGVDKALTLMEEF--------------------------GVKPDVVTFSTI 281
             +     S    +ALTL+EE                           G+ PD + ++ +
Sbjct: 344 DAYFK---SGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTAL 400

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +D     G + +   + D M++ G+E D+H ++ L  G   +G+ QKA ++L  M   GV
Sbjct: 401 IDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGV 460

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
            P+ V++  +I  +    K+  A+ +  +M + G+   L  +
Sbjct: 461 LPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDH 502



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 177/360 (49%), Gaps = 1/360 (0%)

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           ++EA + F KM+     P   + N L+     VG+ + S K  + M     +K +  TYN
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGA-AGIKRSVFTYN 60

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           I++   C +  +E A ++  +M  +G  PD VTYN+L   + + G       +  +M++ 
Sbjct: 61  IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+  T   +++ +CK   M  A  FL+ MK   + PN+V +++ I  F         
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            K    M    + P+  T+++++DA   AG + +  ++ +++++AGI+ ++  ++ L  G
Sbjct: 181 IKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDG 240

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
               G  ++AE +  +M   GV PN   +T ++ G+  A +M+ A  I ++M E  I P+
Sbjct: 241 LCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 300

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           L  Y T+LWG     +   A+ L+  ++E G+         + D++   G A EA  +L+
Sbjct: 301 LLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLE 360



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 134/293 (45%)

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           +EEA     KM    + P   + N L    ++ G    + +   +M    ++ +  T  I
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++   CKEG++E A     +MKE    P++V +NSLI G   +   D        M++  
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
             PDV+T++ +++ +     M K  E   +M   G++P++  +S     + + G  Q+A 
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
                MR+  + PN   +T++I   C A  +  A+ + E++ + GI  N+ TY  LL G 
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            E  +   AEE+ + M   GV P + T   +   +        AK +LK  +E
Sbjct: 242 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKE 294



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 110/247 (44%), Gaps = 24/247 (9%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  EA  +F  ++  G  P   TYT LV    + K  +    ++ ++++  +KPD
Sbjct: 241 LCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 300

Query: 64  SILFNAMI-NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
            +L+  ++   C+ES  ++EA  +  ++K+SG       Y TL+  Y   G+  E+L LL
Sbjct: 301 LLLYGTILWGLCNES-RLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLL 359

Query: 123 QLMSQ----------------------DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
           + M                        DK + P+   Y  L+       +++EA N+  +
Sbjct: 360 EEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDR 419

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           M+  G++ D   Y  L    +  G+  +A  +L EM    V P+E     ++  Y   G 
Sbjct: 420 MIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGK 479

Query: 221 MEDAMRF 227
           +++A+  
Sbjct: 480 VDEALEL 486



 Score = 39.3 bits (90), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 23/103 (22%), Positives = 45/103 (43%)

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
           ++ +  E F  M K  + P     + L     + G    +      M   G+  +V  + 
Sbjct: 1   MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
            +I   C    ++ A S++ +M E G  P++ TY +L+ G+G+
Sbjct: 61  IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGK 103


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 203/417 (48%), Gaps = 11/417 (2%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G    ++TY TLV    R ++F++ + L+ ++ + G  P     + +++   + G +D+
Sbjct: 289 KGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDD 348

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           A ++  K+   G  P    YN LI      G++ K E     + LM    N++PN  TY+
Sbjct: 349 AYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLM----NLRPNGITYS 404

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           IL+ ++C    ++ A +   +M+  GI      YN+L     ++G+   AE +  EM N 
Sbjct: 405 ILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNK 464

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            V P   T   ++SGYCK+  ++ A +   +M +  + PN+  F +LI G          
Sbjct: 465 GVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEA 524

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            +    + E  +KP  VT++ +++ +   G + K  E+ +DM + G+ PD + +  L  G
Sbjct: 525 SELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISG 584

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
               G   KA+  +  + K  V  N + ++ ++ G+C   ++  A+S   +M + GIN +
Sbjct: 585 LCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMD 644

Query: 380 LKTYETLLWGYGEAKQPWRAE--ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           L  +  L+   G  KQP R    +LL+ M ++G+RP       + D++   G  ++A
Sbjct: 645 LVCHAVLI--DGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKA 699



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 195/406 (48%), Gaps = 2/406 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+   A   F+ +I++G   T+  Y +L+    +     +  SL  ++   G++P +  F
Sbjct: 414 GRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTF 473

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            ++I+   +   V +A K++ KM D+G  P   T+  LI G  +  K  E+ +L   + +
Sbjct: 474 TSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVE 533

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K +KP + TYN+L+  +C    I++A+ ++  M   G+ PD  TY  L       G   
Sbjct: 534 RK-IKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVS 592

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A+  + ++    V+ NE     ++ GYC+EG + +A+     M +  ++ +LV    LI
Sbjct: 593 KAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLI 652

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G L   D       L  M + G++PD V +++++D +S  G   K  E +D MV     
Sbjct: 653 DGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECF 712

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P++  ++ L  G  +AGE  +A  +   M+   V PN + +   +        M+ A+ +
Sbjct: 713 PNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGL 772

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           +  M + G+  N  T+  ++ G+ +  +   A ++L  M E G+ P
Sbjct: 773 HHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFP 817



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 95/409 (23%), Positives = 193/409 (47%), Gaps = 2/409 (0%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
            +A  ++N +I+ G  P + T+T L++ L    +      L  ++ +  +KP  + +N +
Sbjct: 487 QKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVL 546

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           I      G +D+A ++ + M   G  P T TY  LI G  + G+  ++   +  + + +N
Sbjct: 547 IEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHK-QN 605

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           VK N+  Y+ L+  +C +  + EA +   +M+  GI  D V +  L     +  +     
Sbjct: 606 VKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFF 665

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            +L +M +  +RP+      ++  Y KEG+ + A      M   E  PN+V + +L+ G 
Sbjct: 666 DLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGL 725

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
               + D        M+   V P+ +T+   +D  +  G M +   +   M+K G+  + 
Sbjct: 726 CKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANT 784

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
              +I+ +G+ + G   +A  +L+ M + G+ P+ V ++T+I  +C +  +  ++ +++ 
Sbjct: 785 VTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDT 844

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           M   G+ P+L  Y  L++G     +  +A EL   M  +G+ P    +Q
Sbjct: 845 MLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDNKYLQ 893



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/417 (22%), Positives = 195/417 (46%), Gaps = 7/417 (1%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           + +  LV       R    + ++  +  + + P+    +A++N   +        ++F +
Sbjct: 156 LGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDE 215

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVG---KPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             ++G +P   T + +++    +    + +E ++ ++    D ++     TYN+L+   C
Sbjct: 216 SVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIV----TYNVLIHGLC 271

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
             + + EA  V   +   G+  D VTY TL   + +  +     Q++ EM      P E 
Sbjct: 272 KGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEA 331

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               +V G  K+G ++DA   + ++      PNL V+N+LI       D D  +   + M
Sbjct: 332 AVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNM 391

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
               ++P+ +T+S ++D++  +G +      FD M++ GI   ++ ++ L  G  + G+ 
Sbjct: 392 SLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDL 451

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             AES+   M   GV P    FT++ISG+C  +++Q+A  +Y KM + GI PN+ T+  L
Sbjct: 452 SAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTAL 511

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           + G     +   A EL   + E+ ++P + T  ++ + +   G   +A  +L+   +
Sbjct: 512 ISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQ 568



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/431 (23%), Positives = 198/431 (45%), Gaps = 7/431 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  +A+ +   +   G  P L  Y  L+ +L +         L S +    ++P+ I 
Sbjct: 343 QGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGIT 402

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +I++   SG +D A+  F +M   G   T   YN+LI G    G    +  L   M+
Sbjct: 403 YSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMT 462

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +K V+P   T+  L+  +C    +++A+ +  KM+ +GI P+  T+  L        + 
Sbjct: 463 -NKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKM 521

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++  E+   +++P E T  +++ GYC++G ++ A   L  M +  + P+   +  L
Sbjct: 522 AEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPL 581

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           I G   +  +  V KA   +++     VK + + +S ++  +   G + +      +M++
Sbjct: 582 ISG---LCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQ 638

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GI  D+   ++L  G ++  + +    +L  M   G+ P+ V++T++I  +      ++
Sbjct: 639 RGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKK 698

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A   ++ M      PN+ TY  L+ G  +A +  RA  L + M+   V P   T     D
Sbjct: 699 AFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLD 758

Query: 424 SWRAIGLAREA 434
           +    G  +EA
Sbjct: 759 NLTKEGNMKEA 769



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 165/376 (43%), Gaps = 37/376 (9%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L    K  EA  +F+ L+E   +PT +TY  L+    R  +      L+  + + G+ PD
Sbjct: 515 LCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPD 574

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK--- 120
           +  +  +I+    +G V +A      +     K     Y+ L+ GY   G+  E+L    
Sbjct: 575 TYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASC 634

Query: 121 --------------------------------LLQLMSQDKNVKPNDRTYNILVRAWCSK 148
                                           LL+ M  D+ ++P++  Y  ++  +  +
Sbjct: 635 EMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDM-HDQGLRPDNVIYTSMIDTYSKE 693

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
            S ++A+     MV     P+ VTY  L     + GE  RA  +   MQ   V PN  T 
Sbjct: 694 GSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITY 753

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
           G  +    KEGNM++A+   + M +  +  N V  N +I+GF  +       K L+ M E
Sbjct: 754 GCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTE 812

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G+ PD VT+ST++  +  +G +G   +++D M+  G+EPD+  +++L  G    GE  K
Sbjct: 813 NGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDK 872

Query: 329 AESILTSMRKYGVHPN 344
           A  +   M + G+ P+
Sbjct: 873 AFELRDDMLRRGIIPD 888


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 102/436 (23%), Positives = 218/436 (50%), Gaps = 4/436 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
            F+ ++  G  P L+T++TL+    ++ R     SL + + + G+ PD ++++ +IN   
Sbjct: 262 FFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLF 321

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
            +G ++E   +F      G K     +++++  Y  VG   +++++   M ++  + PN 
Sbjct: 322 RAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKE-GISPNV 380

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY+IL+   C    + EA  V  +++  G++P  +TY++L   + +  E  R    L+ 
Sbjct: 381 VTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCK-SENLRDGFGLYG 439

Query: 196 -MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
            M      P+   C ++++G  ++G M++A+RF ++  +  +  N  +FN+LI G   +K
Sbjct: 440 IMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLK 499

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
            +    K   LM  + V PDVVT++ ++   +  G + +   +F  ++K G  PD  ++ 
Sbjct: 500 RTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYC 559

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            L  G+ +  +P     I   M+  G+ P++ ++  +I+ +     ++  + +  ++ + 
Sbjct: 560 TLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKY 619

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G+ P++ TY T++ GY   K   +A +L +V++    +P   T  ++ D++   G   +A
Sbjct: 620 GLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDA 679

Query: 435 KRVLKSAEEDRQSMPN 450
             +  S  E R   PN
Sbjct: 680 MLIFSSMLE-RGPEPN 694



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 205/415 (49%), Gaps = 5/415 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EA  +F  ++++G  P+++TY++L+    + +  +    L   + + G 
Sbjct: 387 INGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGH 446

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD ++ + +IN  S  G +DEA++ F +    G       +N LI G   + +  + LK
Sbjct: 447 VPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLK 506

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +  LM   K V P+  TY +LV+    +  ++EA  + ++++  G  PD + Y TL   +
Sbjct: 507 MYILMGMYK-VIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF 565

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +     Q+   MQ+N + P+     ++++ + +EG +E+ +  L  + +  + P++
Sbjct: 566 CKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDI 625

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N++I G+  +K      K   +++    +P+ +TF+ ++DA+   G M     IF  
Sbjct: 626 VTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSS 685

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M++ G EP+I  +S L  GY +    + A  +   M    V PN+V ++ +I G C    
Sbjct: 686 MLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGL 745

Query: 361 MQRAMSIYEKMCEIG--INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           M+ A   ++  C IG  + P++  Y  L+ GY +  +   A  L   M   G+ P
Sbjct: 746 MEEASLAFQ--CAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMP 798



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/486 (23%), Positives = 224/486 (46%), Gaps = 39/486 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+   + +  EA  ++N +IE+G  P L+ Y+ L+  L R  + +   SL S     G+
Sbjct: 282 INVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGV 341

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K D ++F+++++A    G++ +A++++ +M   G  P   TY+ LI G    G+  E+  
Sbjct: 342 KMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACG 401

Query: 121 LL-QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +  Q++ Q   ++P+  TY+ L+  +C   ++ + + +   M+  G  PD V  + L   
Sbjct: 402 VFGQILKQ--GLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLING 459

Query: 180 YAQYGETYRAEQMLFE-----------------------------------MQNNQVRPN 204
            ++ G    A +  F+                                   M   +V P+
Sbjct: 460 LSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPD 519

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T  ++V G  ++G +++A+   +++ +    P+ +++ +LI GF   +D     +   
Sbjct: 520 VVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFK 579

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
           LM+  G+ PD+  ++ +++ +   G +    E+  +++K G+EPDI  ++ +  GY    
Sbjct: 580 LMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLK 639

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              KA  +   ++     PN + FT +I  +C   +M  AM I+  M E G  PN+ TY 
Sbjct: 640 IFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYS 699

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
            L+ GY + +    A EL + M    V P   +  ++ D     GL  EA    + A   
Sbjct: 700 CLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCA-IG 758

Query: 445 RQSMPN 450
           R  +P+
Sbjct: 759 RHLLPD 764



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 168/364 (46%), Gaps = 36/364 (9%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINAC- 74
           ++  ++ +GH P ++  + L+  L+RQ      L    +  K G+  ++ LFNA+I+ C 
Sbjct: 437 LYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCF 496

Query: 75  ----------------------------------SESGNVDEAMKIFQKMKDSGCKPTTS 100
                                             +E G +DEA+ +F ++   G  P   
Sbjct: 497 RLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHI 556

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
            Y TLI G+     P   L++ +LM Q   + P+   YN+L+  +  +  +E    ++ +
Sbjct: 557 IYCTLIDGFCKKRDPATGLQIFKLM-QSNGIFPDICIYNVLINMFFREGCVENVLELLRE 615

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           ++  G++PD VTYNT+   Y       +A ++   ++  + +PN  T  I++  YCK+G 
Sbjct: 616 IIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGR 675

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           M+DAM     M E    PN++ ++ LI G+   ++++   +    M    V P++V++S 
Sbjct: 676 MDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSI 735

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++D     GLM +    F   +   + PD+  + IL +GY + G   +A  +   M   G
Sbjct: 736 LIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNG 795

Query: 341 VHPN 344
           + P+
Sbjct: 796 IMPD 799



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/380 (22%), Positives = 167/380 (43%), Gaps = 10/380 (2%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P + +F+ M+    + GN++   +     ++ G  P+T  Y+ L+  Y   G  + ++  
Sbjct: 107 PATRVFDRMV---GQFGNLEVLGEFHGSFRNYGSNPST-VYSFLLHCYCRNGMVDRAVDT 162

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
              MS+   V  +    + ++      + I+      Y+ +  G+      Y  +  ++ 
Sbjct: 163 FAWMSK-MGVSISHYAASEMLDLLIDSDRIDVILEN-YEEMCKGLG----VYEFVFNSFL 216

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           + GE  +       +    + P    C  I+ G C    +  A  F   M      PNLV
Sbjct: 217 KRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLV 276

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            F++LI  +      D       LM E G+ PD+V +S +++    AG + +   +F   
Sbjct: 277 TFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMA 336

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           +  G++ D+ +FS +   YVR G+  KA  + T M K G+ PNVV ++ +I+G C   ++
Sbjct: 337 LARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRV 396

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             A  ++ ++ + G+ P++ TY +L+ G+ +++       L  +M  KG  P      ++
Sbjct: 397 LEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSML 456

Query: 422 ADSWRAIGLAREAKRVLKSA 441
            +     G+  EA R    A
Sbjct: 457 INGLSRQGMMDEALRFFFQA 476



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 1/186 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +I+ G  P ++TY T++      K F   + L   ++    +P++I F  +I+A  + G 
Sbjct: 616 IIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGR 675

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D+AM IF  M + G +P   TY+ LI GY      E + +L + M  D+ V PN  +Y+
Sbjct: 676 MDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDR-VSPNIVSYS 734

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           IL+   C K  +EEA       +   + PD + Y  L R Y + G    A  +   M  N
Sbjct: 735 ILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVN 794

Query: 200 QVRPNE 205
            + P++
Sbjct: 795 GIMPDD 800



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/411 (20%), Positives = 176/411 (42%), Gaps = 7/411 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P+ + Y+ L+    R       +   + + K G+       + M++   +S  +D  
Sbjct: 136 GSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVI 194

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           ++ +++M    CK     Y  +   +   G+ E+ L   + + + + + P     N +++
Sbjct: 195 LENYEEM----CK-GLGVYEFVFNSFLKRGEVEKGLNFHRALVE-RGLVPKIVDCNKILK 248

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C  N I  A +    MV SG  P+ VT++TL   Y +      A  +   M    + P
Sbjct: 249 GLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVP 308

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +     I+++G  + G +E+            V  ++V+F+S++  ++ + D     +  
Sbjct: 309 DLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVY 368

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           T M + G+ P+VVT+S +++     G + +   +F  ++K G+EP +  +S L  G+ ++
Sbjct: 369 TRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKS 428

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
              +    +   M + G  P+VV+ + +I+G      M  A+  + +  + G+  N   +
Sbjct: 429 ENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLF 488

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
             L+ G    K+     ++  +M    V P   T  ++       G   EA
Sbjct: 489 NALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEA 539


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 109/469 (23%), Positives = 223/469 (47%), Gaps = 35/469 (7%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           V +G   EA  + + ++  G    L   T+L+     Q   +S L L++++ + G+ P+ 
Sbjct: 239 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 298

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY--------------- 109
           + ++ +I+ C ++GN+++A + + +MK  G + +  + N++++GY               
Sbjct: 299 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 358

Query: 110 ------GNV-------------GKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
                  NV             GK  E+  L   +   K + PN  +YN ++   C K++
Sbjct: 359 ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIA-KGISPNVVSYNNIILGHCRKDN 417

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           I  A  V  +M+ +G  P+AVT+  L   Y + G+   A  +   M++  + P + T GI
Sbjct: 418 INAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGI 477

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           I+ G CK G   +      +       P  + +N++I GF+   + +        M E G
Sbjct: 478 IIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVG 537

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           + P  VT+++++D +     +    ++ +DM + G++ DI  +  L  G+ +  + + A 
Sbjct: 538 ITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAH 597

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +L  +R  G+ PN  ++ ++I+G+ N   ++ A+ +Y+KM   GI  +LKTY +L+ G 
Sbjct: 598 ELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGL 657

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            ++ +   A ++   M  KG+ P      ++ +     G    A+++L+
Sbjct: 658 LKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILE 706



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 202/390 (51%), Gaps = 9/390 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK +EA  +++ +I +G  P +++Y  ++    R+    +   +  ++  +G  P+
Sbjct: 377 LCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPN 436

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL- 122
           ++ F  +++   + G+++ A  IF +MKD+   PT +T   +IKG    G+  E   L  
Sbjct: 437 AVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFN 496

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           + +SQ     P    YN ++  +  + +I  A NV  +M   GI P  VTY +L   + +
Sbjct: 497 KFVSQ--GFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCK 554

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                 A ++L +M+   ++ + +  G ++ G+CK  +M+ A   L  ++   + PN  +
Sbjct: 555 GNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFI 614

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +NS+I GF   K+ + V++A+ L ++    G+  D+ T+++++D    +G +    +I  
Sbjct: 615 YNSMITGF---KNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHT 671

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M+  GI PD    ++L  G    G+ + A  IL  M    + P+V+++ T+I+G     
Sbjct: 672 EMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEG 731

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
            +Q A  ++++M + G+ P+  TY+ L+ G
Sbjct: 732 NLQEAFRLHDEMLDRGLVPDNITYDILVNG 761



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 100/413 (24%), Positives = 195/413 (47%), Gaps = 2/413 (0%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
             A  +FN  +E G    + T+ TL++ L ++ +     +L  +V   G+ P+ + +N +
Sbjct: 350 QNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNI 408

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           I       N++ A K++++M D+G  P   T+  L+ GY   G  E +  +   M +D N
Sbjct: 409 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRM-KDAN 467

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           + P D T  I+++  C      E  ++  K V+ G  P  + YNT+   + + G    A 
Sbjct: 468 ILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLAS 527

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            +  EM    + P+  T   ++ G+CK  N++ A++ L  MK   +  ++  + +LI GF
Sbjct: 528 NVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGF 587

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
              +D     + L  +   G+ P+   +++++  + +   + +  +++  MV  GI  D+
Sbjct: 588 CKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDL 647

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             ++ L  G +++G    A  I T M   G+ P+    T +I+G CN  + + A  I E 
Sbjct: 648 KTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILED 707

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           M    + P++  Y TL+ G+ +      A  L   M ++G+ P   T  ++ +
Sbjct: 708 MNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVN 760



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 189/415 (45%), Gaps = 15/415 (3%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           Y+  V  L  +      LSL+ ++   G  P    F ++I AC + GNV EA+++   M 
Sbjct: 196 YSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMV 255

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
           + G     +   +L+KGY   G    +L L+  +S+   V PN  TY++L+   C   +I
Sbjct: 256 NCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLV-PNKVTYSVLIDGCCKNGNI 314

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR---PNERTC 208
           E+A+    +M   GI+    + N++   Y +     ++ Q  F M N+ +     N  T 
Sbjct: 315 EKAFEFYSEMKTKGIRSSVYSLNSILEGYLK----CQSWQNAFTMFNDALESGLANVFTF 370

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             ++S  CKEG M +A      +    + PN+V +N++I G     + +   K    M +
Sbjct: 371 NTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLD 430

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G  P+ VTF+ +MD +   G +     IF  M  A I P      I+ KG  +AG   +
Sbjct: 431 NGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFE 490

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
              +       G  P  + + T+I G+     +  A ++Y +MCE+GI P+  TY +L+ 
Sbjct: 491 GRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLID 550

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           G+ +      A +LL  M+ KG++        + D +         +R +KSA E
Sbjct: 551 GFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFC-------KRRDMKSAHE 598



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 90/423 (21%), Positives = 175/423 (41%), Gaps = 29/423 (6%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           IL    + H A Y+F+                   A  +  RF  ++  + +  K     
Sbjct: 124 ILTNSAETHRAQYLFDQF-----------------ASGKSVRFSCLMDRLVECTK----- 161

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
              L+N  ++   + GN+ EA + F + K  G +     Y+  +           +L LL
Sbjct: 162 ---LYNFPLDI--QEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLL 216

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           + M     + P + T+  ++ A   + ++ EA  +   MV  G   +     +L + Y  
Sbjct: 217 REMRAAGWIPP-EGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCM 275

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G    A  ++ E+  + + PN+ T  +++ G CK GN+E A  F   MK   +  ++  
Sbjct: 276 QGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYS 335

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
            NS+++G+L  +             E G+  +V TF+T++      G M +   ++D+++
Sbjct: 336 LNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVI 394

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             GI P++  ++ +  G+ R      A  +   M   G  PN V FT ++ G+     ++
Sbjct: 395 AKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIE 454

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A SI+ +M +  I P   T   ++ G  +A + +   +L      +G  P       + 
Sbjct: 455 NAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTII 514

Query: 423 DSW 425
           D +
Sbjct: 515 DGF 517



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 104/213 (48%), Gaps = 2/213 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           + N +  +G +  +  Y TL+    +++  KS   L++++   G+ P+  ++N+MI    
Sbjct: 564 LLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFK 623

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
              NV+EA+ +++KM + G      TY +LI G    G+   +  +   M   K + P+D
Sbjct: 624 NMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEM-LSKGILPDD 682

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           R + +L+   C+K   E A  ++  M    + P  + YNTL   + + G    A ++  E
Sbjct: 683 RAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDE 742

Query: 196 MQNNQVRPNERTCGIIVSGYCK-EGNMEDAMRF 227
           M +  + P+  T  I+V+G  K +GN    + F
Sbjct: 743 MLDRGLVPDNITYDILVNGKFKGDGNFSRDLTF 775


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 113/470 (24%), Positives = 220/470 (46%), Gaps = 35/470 (7%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  EA      ++E    P+L+TY  LV  L + ++F    S++ ++   G  P+
Sbjct: 286 LCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPN 345

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             +FNA+I+  S  GN+D+A+++   M   G KP   T+NTL++G+    + E++ ++L+
Sbjct: 346 EFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLE 405

Query: 124 LMSQD----------------------------------KNVKPNDRTYNILVRAWCSKN 149
            +  +                                  +N+K ND    +LV   C   
Sbjct: 406 YLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCG 465

Query: 150 SIEEAWNVVYKMV-ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
              EA ++ +++    G+  +  T N L     + G       +  EM    +  +  + 
Sbjct: 466 KHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISY 525

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             ++ G CK G +E+A +   +M +    P+   +N L+KG  D    D V + L   ++
Sbjct: 526 NTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKD 585

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            GV P++ T++ +++ + +A  +     +F+ +V   +E    V++IL   + +AG   +
Sbjct: 586 HGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTE 645

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  +  +MR   +HP +  ++++I G C    ++ A  I+E+M   G+ PN+  Y  L+ 
Sbjct: 646 AFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIG 705

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           GY +  Q  + E +LQ M    ++P K T  ++ D +  +G  +EA ++L
Sbjct: 706 GYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLL 755



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/488 (22%), Positives = 221/488 (45%), Gaps = 42/488 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ LV   + H++  +F+ +   G    + TY T + A  +  +    + L  K+ + G+
Sbjct: 213 MSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGV 272

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +N +I+   +SG ++EA+    +M ++   P+  TY  L+ G     K +E+  
Sbjct: 273 LPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANS 332

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M   K   PN+  +N L+  +  K ++++A  V   M   G++P+AVT+NTL + +
Sbjct: 333 VLVEM-YSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGF 391

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCG------------------------------- 209
            +  +  +AEQ+L  + +N +  NE  C                                
Sbjct: 392 CRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVND 451

Query: 210 ----IIVSGYCKEGNMEDAMRFLYRMKELE-VHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
               ++V G CK G   +A+   +R+ + + +  N    N+L+ G  +  + + V     
Sbjct: 452 SLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCK 511

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M E G+  D ++++T++     +G + +  ++ + M+K G +PD + ++ L KG    G
Sbjct: 512 EMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKG 571

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           +      +L   + +GV PN+  +  ++ G+CNA ++  A+S++ K+    +  +   Y 
Sbjct: 572 KMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYN 631

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
            L+  + +A     A +L   M    + P   T   +        L  EAK +    EE 
Sbjct: 632 ILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIF---EEM 688

Query: 445 RQS--MPN 450
           R    MPN
Sbjct: 689 RNEGLMPN 696



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 175/367 (47%), Gaps = 5/367 (1%)

Query: 39  LTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS-GCKP 97
           L +  +F S L ++  +    +K +  L   ++    + G   EA+ ++ ++ D  G   
Sbjct: 426 LCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAA 485

Query: 98  TTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
            T+T N L+ G    G  EE   + + M + + +  +  +YN L+   C    IEEA+ +
Sbjct: 486 NTTTSNALLYGLCERGNMEEVFPVCKEMVE-RGLVLDGISYNTLIFGCCKSGKIEEAFKL 544

Query: 158 VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
             KM+  G +PD  TYN L +  A  G+     ++L E +++ V PN  T  +++ GYC 
Sbjct: 545 KEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCN 604

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
              +++A+    ++   +V  + VV+N LI       +     K    M    + P + T
Sbjct: 605 ADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFT 664

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           +S+I+       L+ + + IF++M   G+ P++  ++ L  GY + G+  + ESIL  M 
Sbjct: 665 YSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMT 724

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
              + PN + +T +I G+C     + A  +  +M   GI+P+  TY  L  GY +  +  
Sbjct: 725 SNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENE-- 782

Query: 398 RAEELLQ 404
             EE LQ
Sbjct: 783 -LEETLQ 788



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/409 (23%), Positives = 180/409 (44%), Gaps = 11/409 (2%)

Query: 45  FKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNT 104
           F + +   SK    G+ P     N ++++  +S  + ++ ++F  M   G      TY T
Sbjct: 191 FDTFMLFTSK----GVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYAT 246

Query: 105 LIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS 164
            I  Y   GK +E++ L   M +   V PN  TYN L+   C    +EEA     +MV +
Sbjct: 247 AINAYCKGGKIDEAVGLFLKMGEG-GVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVEN 305

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
            + P  VTY  L     ++ +   A  +L EM +    PNE     ++ GY ++GNM+DA
Sbjct: 306 KVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDA 365

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL--TLMEEFGVKPDVVTFSTIM 282
           +R    M    + PN V  N+L++GF      +  ++ L   L     V  D  ++  ++
Sbjct: 366 LRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSY--VL 423

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM-RKYGV 341
                +       +I   ++   I+ +  + ++L  G  + G+  +A  +   +  K G+
Sbjct: 424 HLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGL 483

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
             N      ++ G C    M+    + ++M E G+  +  +Y TL++G  ++ +   A +
Sbjct: 484 AANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFK 543

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           L + M ++G +P   T   +       G   +  RVL  A +D   +PN
Sbjct: 544 LKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEA-KDHGVVPN 591



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 6/131 (4%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  IF  +  EG  P +  YT L+    +  +   I S++ ++  + ++P+ I +  MI
Sbjct: 680 EAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMI 739

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   + GN  EA K+  +M  +G  P T TY  L KGY    + EE+L+       D  V
Sbjct: 740 DGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEETLQ------GDTAV 793

Query: 132 KPNDRTYNILV 142
              + TY  LV
Sbjct: 794 PLEEITYTTLV 804


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 197/447 (44%), Gaps = 44/447 (9%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P ++ +T ++  L R+KR     S++ +  + G +PD + +N  I+   ++  VD+A ++
Sbjct: 39  PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 98

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            +KM +  C PTT TY  L+ G    G+ +E++ +L+ M +  N  P  +TY +++    
Sbjct: 99  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGN-SPTLKTYTVVIDGLS 157

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN----QVR 202
               +EEA  +   M+ +G +PDA  Y  L    A+ G+   A   L +M  N     V 
Sbjct: 158 KAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVE 217

Query: 203 PNERTCGIIVSGYCKEGNMEDAM----------------------------------RFL 228
           P+     +++   C  GN+EDA+                                   F+
Sbjct: 218 PDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFV 277

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
            +M E    P L  + SL+ GFL +   D     L    E G  PD VT+++I+D     
Sbjct: 278 KKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKL 337

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
           G + +  E F +M   G EPD   ++ L  G+++A    KA  +   M + G   + V +
Sbjct: 338 GRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTY 397

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
             ++ G C A ++  A + +  M E G    + TY  L+ G+        A EL + M +
Sbjct: 398 NIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLD 457

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAK 435
           +G  P   +  ++       GL R  K
Sbjct: 458 RGCEPNLVSYNIIIR-----GLCRAGK 479



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 213/488 (43%), Gaps = 46/488 (9%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+  G+  EA  I   ++E+G+ PTL TYT ++  L++  R +    +   +  +G +PD
Sbjct: 121 LLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPD 180

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGC----KPTTSTYNTLIKGYGNVGKPEESL 119
           + ++ A+I+  ++ G +DEA+    +M ++GC    +P    +N +I+     G  E++L
Sbjct: 181 AFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDAL 240

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
                +  D ++     T+N LV A C     EEA   V KM      P   TY +L   
Sbjct: 241 AYFDEL--DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDG 298

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + + G    A   L E       P+  T   I+ G CK G +E+     + M+     P+
Sbjct: 299 FLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPD 358

Query: 240 LVVFNSLIKGFLDIK--------------------------DSDGVDKA---------LT 264
            V + +LI GF+  K                            DG+ KA           
Sbjct: 359 AVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFL 418

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            MEE G    VVT+S +MD + S G +    E+F  M+  G EP++  ++I+ +G  RAG
Sbjct: 419 AMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAG 478

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK-MQRAMSIYEKMCEIGINPNLKTY 383
           +  KA      + +  + P+V  F + + G C  +  +   + ++E M   G +PNL +Y
Sbjct: 479 KLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSY 538

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI-GLAREAKRVLKSAE 442
             L+ G   A       E+   M  +GV P       +   W  I G   EA  V +  E
Sbjct: 539 SILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLI-RWLCIAGRVDEALEVFRELE 597

Query: 443 EDRQSMPN 450
             R+S P+
Sbjct: 598 --RRSAPD 603



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/482 (24%), Positives = 209/482 (43%), Gaps = 78/482 (16%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG----MKPD 63
           G+  EA  IF  ++  G RP    YT L++ L +  +    L  ++++ ++G    ++PD
Sbjct: 160 GRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPD 219

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDS------------------------------ 93
            ++ N +I     SGN+++A+  F ++ DS                              
Sbjct: 220 VVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKK 279

Query: 94  ----GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM-SQDKNVKPNDRTYNILVRAWCSK 148
                C PT  TY +L+ G+  +G+ +E+L  LQL  + ++   P+  TY  ++   C  
Sbjct: 280 MSERRCFPTLFTYTSLVDGFLKLGRLDEAL--LQLKEAVERGFIPDAVTYTSIIDGLCKL 337

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
             +EE     ++M   G +PDAVTY  L   + +     +A ++  +M  +    +  T 
Sbjct: 338 GRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTY 397

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
            II+ G CK G + +A      M+E      +V +++L+ GF    +     +    M +
Sbjct: 398 NIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLD 457

Query: 269 FGVKPDVVTFSTIMDAWSSAG---------------------------LMGKCQ------ 295
            G +P++V+++ I+     AG                           L G CQ      
Sbjct: 458 RGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVG 517

Query: 296 ---EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
              E+F+ MV  G  P++H +SIL  G  RAG  +    I   M   GV P+VV+F T+I
Sbjct: 518 DGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLI 577

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
              C A ++  A+ ++ ++ E    P+  +Y +LL      ++   A  L   M+ +G  
Sbjct: 578 RWLCIAGRVDEALEVFREL-ERRSAPDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCA 636

Query: 413 PK 414
           P+
Sbjct: 637 PR 638



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 156/356 (43%), Gaps = 45/356 (12%)

Query: 99  TSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVV 158
           T     L+ G    G+ + ++ LL  M       P+   + +++   C +  ++EA++V+
Sbjct: 9   TRVCTALLNGLCKTGQLDRAMLLLDEMP----CSPDMVAFTVVINGLCREKRLDEAFSVL 64

Query: 159 YKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
            + V +G +PD VTYN                                   + + G CK 
Sbjct: 65  ERAVRAGCEPDYVTYN-----------------------------------VFIDGLCKA 89

Query: 219 GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTF 278
             ++DA + L +M E +  P  V + +L+ G L     D     L  M E G  P + T+
Sbjct: 90  ERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTY 149

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           + ++D  S AG + + + IF DM+  G  PD  V++ L  G  + G+  +A   L  M +
Sbjct: 150 TVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVE 209

Query: 339 ----YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
                GV P+VV+   VI   C +  ++ A++ ++++ +  ++    T+  L+    +A+
Sbjct: 210 NGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL-DDSLDLTHFTFNPLVAALCKAE 268

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           +   A   ++ M E+   P   T   + D +  +G   EA   LK A E R  +P+
Sbjct: 269 RTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVE-RGFIPD 323



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 7/216 (3%)

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           D      L     + G+  RA  +L EM  +   P+     ++++G C+E  +++A   L
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLDEMPCS---PDMVAFTVVINGLCREKRLDEAFSVL 64

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
            R       P+ V +N  I G    +  D   + L  M+E    P  VT++ ++D    A
Sbjct: 65  ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKA 124

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
           G + +   I + MV+ G  P +  ++++  G  +AG  ++A  I   M   G  P+  ++
Sbjct: 125 GRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVY 184

Query: 349 TTVISGWCNAVKMQRAMSIYEKM----CEIGINPNL 380
           T +ISG     K+  A+    +M    C  G+ P++
Sbjct: 185 TALISGLAKIGKLDEALVYLNQMVENGCARGVEPDV 220



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 3/204 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+    +G    A  +F  +++ G  P L++Y  ++  L R  +         K+ +  +
Sbjct: 436 MDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRL 495

Query: 61  KPDSILFNAMINA-CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
            PD   FN+ ++  C     V + +++F+ M   G  P   +Y+ L+ G    G  E +L
Sbjct: 496 CPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTL 555

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           ++   M   + V P+   +N L+R  C    ++EA   V++ +     PDA +Y +L  A
Sbjct: 556 EIFHEMVS-RGVAPDVVVFNTLIRWLCIAGRVDEALE-VFRELERRSAPDAWSYWSLLDA 613

Query: 180 YAQYGETYRAEQMLFEMQNNQVRP 203
            ++      A  + F M+     P
Sbjct: 614 LSRCERMEEARLLSFHMKLQGCAP 637



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 3/170 (1%)

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D  V + L  G  + G+  +A  +L  M      P++V FT VI+G C   ++  A S+ 
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFSVL 64

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           E+    G  P+  TY   + G  +A++   A +LL+ M+EK   P   T   + D     
Sbjct: 65  ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKA 124

Query: 429 GLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPG 478
           G   EA  +L+   E   S   K   + ++ + +   +  +   F+ + G
Sbjct: 125 GRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLG 174



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 66/128 (51%), Gaps = 4/128 (3%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  ++ +G  P L +Y+ L+  + R    +  L +  ++   G+ PD ++FN +I    
Sbjct: 522 LFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLC 581

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
            +G VDEA+++F++++     P   +Y +L+       + EE+ +LL    + +   P  
Sbjct: 582 IAGRVDEALEVFRELERRS-APDAWSYWSLLDALSRCERMEEA-RLLSFHMKLQGCAP-- 637

Query: 136 RTYNILVR 143
           R Y++ VR
Sbjct: 638 RHYDLTVR 645


>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
          Length = 604

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 197/424 (46%), Gaps = 7/424 (1%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM--KPDSILFNAMINACSESGNVDEA 83
           RP ++TY  LV  L +  R    L ++  + +  +  +PD +  N +++   +SG V EA
Sbjct: 169 RPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEA 228

Query: 84  MKIFQKMKDS--GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +   ++   S  GC P T TYN LI  +  VG    + +L++ M +++ V  N  T N +
Sbjct: 229 LAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKM-ENEGVPQNIVTLNTI 287

Query: 142 VRAWCSKNSIEEAWNVVY--KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           V   C       A       + V    + +AVTY+TL  A         A ++  E  + 
Sbjct: 288 VGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSE 347

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+      ++SG  + G +EDA      MKE     +   +N LI GF   K     
Sbjct: 348 GHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEA 407

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            + L  M+E G++PDV T++T++     AG      E+   M+  G +P +  F  L  G
Sbjct: 408 YELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHG 467

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y + G+  +A  IL SM + G+HPN V++ T+I   C    +  A+ ++++M E  +  N
Sbjct: 468 YCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPAN 527

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + T+  LL G  +   P +A EL+  M E+   P   T+ ++ +    IG     KR ++
Sbjct: 528 VTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQ 587

Query: 440 SAEE 443
             E 
Sbjct: 588 QGEH 591



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 184/387 (47%), Gaps = 41/387 (10%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGC---KPTTSTYNTLIKGYGNVGKPEESL 119
           D   FN+++ A +   +V    +I+  M+  GC   +P   TY  L+ G    G+  ++L
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQ--GCASVRPDVVTYGILVNGLCKAGRVGDAL 192

Query: 120 KLLQLMS-QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS--GIQPDAVTYNTL 176
           ++L  MS QD +++P+  T N +V   C    ++EA   V + ++S  G  P+ VTYN L
Sbjct: 193 RVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCL 252

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
             A+ + G    A +++ +M+N  V  N  T   IV G C+ G    A+ F +R K   V
Sbjct: 253 IDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEF-FREKR-TV 310

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P                  +G             K + VT+ST++ A      +G   E
Sbjct: 311 WP------------------EG-------------KGNAVTYSTLVGALLHTNNVGMAME 339

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F + +  G  PD  ++  +  G  +AG  + A S+ +SM++ G   +   +  +I+G+C
Sbjct: 340 LFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFC 399

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
              ++  A  + ++M E+GI P++ TY TLL G  +A      +ELL  M + G +P   
Sbjct: 400 RKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVI 459

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEE 443
           T   +   +  +G   EA R+L+S +E
Sbjct: 460 TFGTLVHGYCKVGKIDEALRILRSMDE 486



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 152/343 (44%), Gaps = 38/343 (11%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM---------------------- 60
            G  P  +TY  L+ A  R         L+ K+E +G+                      
Sbjct: 240 HGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGA 299

Query: 61  ---------------KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTL 105
                          K +++ ++ ++ A   + NV  AM++F +    G  P    Y T+
Sbjct: 300 ALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTM 359

Query: 106 IKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
           I G    G+ E++  +   M ++   K + + YNIL+  +C K  + EA+ ++ +M   G
Sbjct: 360 ISGLTQAGRLEDACSMASSM-KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           I+PD  TYNTL     + G+    +++L +M ++  +P+  T G +V GYCK G +++A+
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           R L  M E  +HPN V++N+LI       D D   +    M+E  V  +V TF+ ++   
Sbjct: 479 RILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
               +  K  E+ D M +    PD     +L +     GE  +
Sbjct: 539 RDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDR 581



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 120/245 (48%), Gaps = 1/245 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F+  + EGH P  I Y T+++ LT+  R +   S+ S +++ G K D+  +N +I 
Sbjct: 337 AMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIA 396

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
                  + EA ++ Q+MK+ G +P   TYNTL+ G    G      +LL  M  D   +
Sbjct: 397 GFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDD-GCQ 455

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+  T+  LV  +C    I+EA  ++  M  SGI P+ V YNTL     + G+   A ++
Sbjct: 456 PSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIEL 515

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             EM+   V  N  T   ++ G   +   E A   + +M+E    P+ V  + L++    
Sbjct: 516 FDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPV 575

Query: 253 IKDSD 257
           I ++D
Sbjct: 576 IGETD 580



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 112/225 (49%), Gaps = 1/225 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  +A  + + + E G +     Y  L+A   R+KR      L+ ++++ G++PD
Sbjct: 363 LTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPD 422

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +N +++   ++G+     ++  KM D GC+P+  T+ TL+ GY  VGK +E+L++L+
Sbjct: 423 VCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILR 482

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +   + PN+  YN L+   C +  ++ A  +  +M    +  +  T+N L +     
Sbjct: 483 SMDE-SGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDK 541

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
               +A +++ +M+  +  P+  T  +++      G  +   RF+
Sbjct: 542 NMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFM 586



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 24/116 (20%), Positives = 54/116 (46%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA  I   + E G  P  + Y TL+  L ++      + L  ++++  +  +   F
Sbjct: 472 GKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTF 531

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           NA++    +    ++A ++  +M++  C P   T + L++    +G+ +   + +Q
Sbjct: 532 NALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQ 587


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 122/549 (22%), Positives = 233/549 (42%), Gaps = 54/549 (9%)

Query: 5   VGKGKPHEAHYIFNCLIEEGH---RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK 61
           V +  P  A   +N +   G     PT+ TY  L+    R  R     + +  V K G +
Sbjct: 65  VARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFR 124

Query: 62  PDSILFNAMINACSESGNVDEAMKI-FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            D+I F  ++          +AM I  ++M + GC P   +YN L+KG  +  + +E+L+
Sbjct: 125 VDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALE 184

Query: 121 LLQLMSQDKN---------------------------------------------VKPND 135
           LL +M+ D+                                              V P+ 
Sbjct: 185 LLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDC 244

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TYN ++  +CS    +EA   + KM + G++P+ VTY++L     + G +  A ++   
Sbjct: 245 MTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDS 304

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M    + P+  T   ++ G+CKEG + ++ +    M  + V P+++ +N+LI G      
Sbjct: 305 MTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGK 364

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D   K L  M   GVKPD+VT+ T+++ +     M     +F +MV +G+ P+I  ++I
Sbjct: 365 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 424

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           + +G         A+ +  S+ K G    +  +  ++ G C       A+ +++ +C   
Sbjct: 425 ILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 484

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           +    +T+  ++    +  +   A++L       G+ P   T  L+A++    G   E  
Sbjct: 485 LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELD 544

Query: 436 RVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSEHNGSSAAKIRSQ 495
            +  S EE+  S  ++     V  + ++ +++ + +    I      E + S  A   S 
Sbjct: 545 DLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMI-----DEKHFSLEASTASF 599

Query: 496 IVLRSDTVW 504
           ++  S  VW
Sbjct: 600 LLESSPIVW 608



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/443 (24%), Positives = 216/443 (48%), Gaps = 15/443 (3%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG---MKPDSILFN 68
           +A ++F+ L+  G   ++      +A + R     ++ S  +++ + G   + P    + 
Sbjct: 38  DARHVFDELLRRGRGASIYGLNRALADVARHSPAAAV-SRYNRMARAGAGKVTPTVHTYA 96

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I  C  +G +D        +   G +    T+  L+KG     +  +++ ++     +
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV---ASGIQPDAVTYNTLARAYAQYG- 184
               P+  +YN L++  C +N  +EA  +++ M      G  PD V+YNT+   + + G 
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGI 216

Query: 185 -------ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
                     +A ++L  M  N V P+  T   I+ GYC  G  ++A+  L +M+   V 
Sbjct: 217 QTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVE 276

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           PN+V ++SL+        S    K    M + G++PD+ T+ T++      G + + +++
Sbjct: 277 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKL 336

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           FD MV+ G++PDI  ++ L  G   AG+  +A  +L SM   GV P++V + T+I+G+C 
Sbjct: 337 FDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 396

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             +M  A++++++M   G++PN+ TY  +L G    ++   A+EL   + + G + + ST
Sbjct: 397 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELST 456

Query: 418 IQLVADSWRAIGLAREAKRVLKS 440
             ++        L  EA R+ ++
Sbjct: 457 YNIILHGLCKNNLTDEALRMFQN 479



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 138/333 (41%), Gaps = 36/333 (10%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L   G+  EA  IF+ + + G  P + TY TL+    ++ R      L   + + G+
Sbjct: 286 MNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGV 345

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD I +N +I+ C  +G +DEA K+   M   G KP   TY TLI GY  V + +++L 
Sbjct: 346 KPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALA 405

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M     V PN  TYNI+++          A  +   +  SG Q +  TYN      
Sbjct: 406 LFKEMVS-SGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYN------ 458

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                                        II+ G CK    ++A+R    +   ++    
Sbjct: 459 -----------------------------IILHGLCKNNLTDEALRMFQNLCLTDLQLET 489

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FN +I   L     D            G+ PDV T+S + +     G + +  ++F  
Sbjct: 490 RTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLS 549

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           M + G   D  + + + +  ++ G+  +A + L
Sbjct: 550 MEENGCSADSRMLNSIVRKLLQRGDITRAGTYL 582


>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 197/424 (46%), Gaps = 7/424 (1%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM--KPDSILFNAMINACSESGNVDEA 83
           RP ++TY  LV  L +  R    L ++  + +  +  +PD +  N +++   +SG V EA
Sbjct: 169 RPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEA 228

Query: 84  MKIFQKMKDS--GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +   ++   S  GC P T TYN LI  +  VG    + +L++ M +++ V  N  T N +
Sbjct: 229 LAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKM-ENEGVPQNIVTLNTI 287

Query: 142 VRAWCSKNSIEEAWNVVY--KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           V   C       A       + V    + +AVTY+TL  A         A ++  E  + 
Sbjct: 288 VGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSE 347

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+      ++SG  + G +EDA      MKE     +   +N LI GF   K     
Sbjct: 348 GHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEA 407

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            + L  M+E G++PDV T++T++     AG      E+   M+  G +P +  F  L  G
Sbjct: 408 YELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHG 467

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y + G+  +A  IL SM + G+HPN V++ T+I   C    +  A+ ++++M E  +  N
Sbjct: 468 YCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPAN 527

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + T+  LL G  +   P +A EL+  M E+   P   T+ ++ +    IG     KR ++
Sbjct: 528 VTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQ 587

Query: 440 SAEE 443
             E 
Sbjct: 588 QGEH 591



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 184/387 (47%), Gaps = 41/387 (10%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGC---KPTTSTYNTLIKGYGNVGKPEESL 119
           D   FN+++ A +   +V    +I+  M+  GC   +P   TY  L+ G    G+  ++L
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQ--GCASVRPDVVTYGILVNGLCKAGRVGDAL 192

Query: 120 KLLQLMS-QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS--GIQPDAVTYNTL 176
           ++L  MS QD +++P+  T N +V   C    ++EA   V + ++S  G  P+ VTYN L
Sbjct: 193 RVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCL 252

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
             A+ + G    A +++ +M+N  V  N  T   IV G C+ G    A+ F +R K   V
Sbjct: 253 IDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEF-FREKR-TV 310

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P                  +G             K + VT+ST++ A      +G   E
Sbjct: 311 WP------------------EG-------------KGNAVTYSTLVGALLHTNNVGMAME 339

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F + +  G  PD  ++  +  G  +AG  + A S+ +SM++ G   +   +  +I+G+C
Sbjct: 340 LFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFC 399

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
              ++  A  + ++M E+GI P++ TY TLL G  +A      +ELL  M + G +P   
Sbjct: 400 RKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVI 459

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEE 443
           T   +   +  +G   EA R+L+S +E
Sbjct: 460 TFGTLVHGYCKVGKIDEALRILRSMDE 486



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 154/348 (44%), Gaps = 38/348 (10%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM---------------------- 60
            G  P  +TY  L+ A  R         L+ K+E +G+                      
Sbjct: 240 HGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGA 299

Query: 61  ---------------KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTL 105
                          K +++ ++ ++ A   + NV  AM++F +    G  P    Y T+
Sbjct: 300 ALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTM 359

Query: 106 IKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
           I G    G+ E++  +   M ++   K + + YNIL+  +C K  + EA+ ++ +M   G
Sbjct: 360 ISGLTQAGRLEDACSMASSM-KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           I+PD  TYNTL     + G+    +++L +M ++  +P+  T G +V GYCK G +++A+
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           R L  M E  +HPN V++N+LI       D D   +    M+E  V  +V TF+ ++   
Sbjct: 479 RILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
               +  K  E+ D M +    PD     +L +     GE  + +  +
Sbjct: 539 RDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFM 586



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 120/245 (48%), Gaps = 1/245 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F+  + EGH P  I Y T+++ LT+  R +   S+ S +++ G K D+  +N +I 
Sbjct: 337 AMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIA 396

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
                  + EA ++ Q+MK+ G +P   TYNTL+ G    G      +LL  M  D   +
Sbjct: 397 GFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDD-GCQ 455

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+  T+  LV  +C    I+EA  ++  M  SGI P+ V YNTL     + G+   A ++
Sbjct: 456 PSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIEL 515

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             EM+   V  N  T   ++ G   +   E A   + +M+E    P+ V  + L++    
Sbjct: 516 FDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPV 575

Query: 253 IKDSD 257
           I ++D
Sbjct: 576 IGETD 580



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 112/225 (49%), Gaps = 1/225 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  +A  + + + E G +     Y  L+A   R+KR      L+ ++++ G++PD
Sbjct: 363 LTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPD 422

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +N +++   ++G+     ++  KM D GC+P+  T+ TL+ GY  VGK +E+L++L+
Sbjct: 423 VCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILR 482

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +   + PN+  YN L+   C +  ++ A  +  +M    +  +  T+N L +     
Sbjct: 483 SMDE-SGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDK 541

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
               +A +++ +M+  +  P+  T  +++      G  +   RF+
Sbjct: 542 NMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFM 586



 Score = 42.4 bits (98), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 24/116 (20%), Positives = 54/116 (46%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA  I   + E G  P  + Y TL+  L ++      + L  ++++  +  +   F
Sbjct: 472 GKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTF 531

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           NA++    +    ++A ++  +M++  C P   T + L++    +G+ +   + +Q
Sbjct: 532 NALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQ 587


>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Glycine max]
          Length = 576

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 198/405 (48%), Gaps = 5/405 (1%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA   +  L+E    PT  TY  L+ A       +   ++ +++   G+   ++++NA I
Sbjct: 173 EAESTYLQLLEARCIPTEDTYALLIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAYI 232

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-QLMSQDKN 130
           N   + GN D+A +IF++MK   CKPTT TY  LI  YG  GK   +LKL  ++MS D  
Sbjct: 233 NGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHD-- 290

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
            KPN  TY  LV A+  +   E+A  V  +M  +G++PD   YN L  AY++ G  Y A 
Sbjct: 291 CKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAA 350

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           ++   MQ+    P+  +  I+V  Y K G  +DA      MK + + P +     L+  +
Sbjct: 351 EIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAY 410

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
             +   +  ++ L  M + G+K D    +++++ +   G  GK +E+   M K     DI
Sbjct: 411 SKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADI 470

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             ++IL   Y +AG  ++ E +   +   G+ P+VV +T+ I  +       + + I+E+
Sbjct: 471 STYNILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEE 530

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE--KGVRP 413
           M + G  P+  T + LL       Q  +   +++ M +  K V P
Sbjct: 531 MIDDGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMHKDMKTVLP 575



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 173/361 (47%), Gaps = 12/361 (3%)

Query: 93  SGCKPTTSTYNTLIKGYGN--VGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
           S  KP    YN LI+ +G   + K  ES   LQL+  +    P + TY +L++A+C    
Sbjct: 149 SSFKPDVICYNLLIEAFGQKLLYKEAES-TYLQLL--EARCIPTEDTYALLIKAYCISGL 205

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           +E+A  V  +M   G+   AV YN       + G + +AE++   M+ +  +P   T  +
Sbjct: 206 LEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTM 265

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           +++ Y K G    A++  + M   +  PN+  + +L+  F      +  ++    M+E G
Sbjct: 266 LINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAG 325

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           ++PDV  ++ +M+A+S AG      EIF  M   G EPD   ++IL   Y +AG    AE
Sbjct: 326 LEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAE 385

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           ++   M++ G+ P +     ++S +     + +   I  +MC+ G+  +     ++L  Y
Sbjct: 386 AVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLY 445

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           G   Q  + EE+L+VME+       ST  ++ + +   G        ++  E+  Q +P+
Sbjct: 446 GRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGF-------IERMEDLFQLLPS 498

Query: 451 K 451
           K
Sbjct: 499 K 499



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 89/429 (20%), Positives = 197/429 (45%), Gaps = 1/429 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L+    +P +I Y  L+ A  ++  +K   S   ++ +    P    +  +I A   SG 
Sbjct: 146 LLRSSFKPDVICYNLLIEAFGQKLLYKEAESTYLQLLEARCIPTEDTYALLIKAYCISGL 205

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +++A  +F +M++ G   +   YN  I G    G  +++ ++ + M +D   KP   TY 
Sbjct: 206 LEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDA-CKPTTETYT 264

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           +L+  +        A  + ++M++   +P+  TY  L  A+A+ G   +AE++  +MQ  
Sbjct: 265 MLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEA 324

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            + P+      ++  Y + G    A      M+ +   P+   +N L+  +      D  
Sbjct: 325 GLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDA 384

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
           +     M+  G+ P + +   ++ A+S  G + KC+EI + M K+G++ D +V + +   
Sbjct: 385 EAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNL 444

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y R G+  K E +L  M K     ++  +  +I+ +  A  ++R   +++ +   G+ P+
Sbjct: 445 YGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIERMEDLFQLLPSKGLKPD 504

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + T+ + +  Y + K   +  E+ + M + G  P   T +++  +        +   V++
Sbjct: 505 VVTWTSRIGAYSKKKLYLKCLEIFEEMIDDGCYPDGGTAKVLLAACSNEDQTEQVTTVIR 564

Query: 440 SAEEDRQSM 448
           +  +D +++
Sbjct: 565 TMHKDMKTV 573



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 165/338 (48%), Gaps = 1/338 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L+  G   +A  IF  + ++  +PT  TYT L+    +  +    L L  ++     
Sbjct: 232 INGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDC 291

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP+   + A++NA +  G  ++A ++F++M+++G +P    YN L++ Y   G P  + +
Sbjct: 292 KPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAE 351

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +  LM Q    +P+  +YNILV A+      ++A  V   M   GI P   ++  L  AY
Sbjct: 352 IFSLM-QHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAY 410

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++ G   + E++L +M  + ++ +      +++ Y + G        L  M++     ++
Sbjct: 411 SKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADI 470

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +N LI  +      + ++    L+   G+KPDVVT+++ + A+S   L  KC EIF++
Sbjct: 471 STYNILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEE 530

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           M+  G  PD     +L        + ++  +++ +M K
Sbjct: 531 MIDDGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMHK 568



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/337 (21%), Positives = 154/337 (45%), Gaps = 1/337 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  +F  +   G   + + Y   +  L +         +  +++KD  KP +  +
Sbjct: 204 GLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETY 263

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +IN   ++G    A+K+F +M    CKP   TY  L+  +   G  E++ ++ + M Q
Sbjct: 264 TMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQM-Q 322

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  ++P+   YN L+ A+        A  +   M   G +PD  +YN L  AY + G   
Sbjct: 323 EAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQD 382

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            AE +  +M+   + P  ++  +++S Y K G++      L +M +  +  +  V NS++
Sbjct: 383 DAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSML 442

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             +  +     +++ L +ME+     D+ T++ +++ +  AG + + +++F  +   G++
Sbjct: 443 NLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIERMEDLFQLLPSKGLK 502

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           PD+  ++     Y +     K   I   M   G +P+
Sbjct: 503 PDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDDGCYPD 539


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 196/400 (49%), Gaps = 41/400 (10%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P++  Y  L+  + ++ R +  + L+ ++  +G+ P+ + ++ +IN+   SGNV+ A  
Sbjct: 241 KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFA 300

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +F +M   GC     T+  LIKG    GK  E+L L +LM QD   +PN   YN L+   
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD-GCEPNVVAYNTLIHGL 359

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM------------- 192
           CS  S+EEA  V  +M  SG  P+  TY+ L   +A+ G+   A +              
Sbjct: 360 CSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNV 419

Query: 193 --------------LFEMQNNQVR--------PNERTCGIIVSGYCKEGNMEDAMRFLYR 230
                         +F+  N+ V         PN  T    + G C  G +E AM+ L R
Sbjct: 420 VTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLER 479

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
           M+     PN+  +N L+     +   +        +E   ++P++VT++T++  +S AG+
Sbjct: 480 MQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGM 539

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL---TSMRKYGVHPNVVM 347
           MG+  ++F   +  G  PD   ++ +   Y + G+ + A  ++   +SM+++  HP+++ 
Sbjct: 540 MGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEW--HPDIIT 597

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           +T++I G CN + ++ AM+  +K    GI PN  T+  L+
Sbjct: 598 YTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/473 (23%), Positives = 210/473 (44%), Gaps = 31/473 (6%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  +F  + E G +PT+  Y  L+ AL  + +F+ I  L + ++KDG+ P+   +
Sbjct: 123 GSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTY 182

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGC------------------------------KP 97
           N ++ A  ++  VD A K+F +M + GC                              KP
Sbjct: 183 NILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKP 242

Query: 98  TTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
           +   YN LI G    G+ E ++KLL  M  D  V PN  +Y+ ++ + C   ++E A+ +
Sbjct: 243 SVPVYNALIDGMCKEGRIEVAIKLLGEM-MDNGVDPNVVSYSCIINSLCVSGNVELAFAL 301

Query: 158 VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
             +M   G   +  T+  L +     G+ Y A  +   M  +   PN      ++ G C 
Sbjct: 302 FAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCS 361

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
            G++E+A++   +M+     PN+  ++ LI GF    D  G  +    M   G +P+VVT
Sbjct: 362 NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVT 421

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           ++ ++D      +  +   + + M   G  P+   F+   KG    G  + A  +L  M+
Sbjct: 422 YTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQ 481

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
            +G  PN+  +  ++       K + A  +++++    + PNL TY T+L+G+  A    
Sbjct: 482 GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG 541

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            A +L      +G  P   T   +  ++   G  + A ++++     ++  P+
Sbjct: 542 EALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPD 594



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 210/455 (46%), Gaps = 36/455 (7%)

Query: 28  TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIF 87
           T  TY  ++  L R+     +  ++ +++ DG+     LF  +IN     G+ ++A+K+F
Sbjct: 73  TASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMF 132

Query: 88  QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
            ++ + GCKPT   YN L+    +  K +    L   M +D  + PN  TYNIL++A C 
Sbjct: 133 YRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKD-GLIPNVFTYNILLKALCK 191

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ---------------- 191
            + ++ A  +  +M   G  PDAVTY T+  +  + G+   A +                
Sbjct: 192 NDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALI 251

Query: 192 --------------MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
                         +L EM +N V PN  +   I++  C  GN+E A     +M      
Sbjct: 252 DGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCD 311

Query: 238 PNLVVFNSLIKG-FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            N+  F  LIKG F+  K  + +D    LM + G +P+VV ++T++    S G + +  +
Sbjct: 312 ANIHTFTPLIKGCFMRGKLYEALD-LWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           + D M ++G  P++  +SIL  G+ ++G+   A      M  +G  PNVV +T ++   C
Sbjct: 371 VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLC 430

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY-GEAKQPWRAEELLQVMEEKGVRPKK 415
                 +A S+ EKM   G  PN  T+ T + G  G  +  W A +LL+ M+  G  P  
Sbjct: 431 KNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEW-AMKLLERMQGHGCLPNI 489

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           +T   + D+   +    EA  + +  E  R   PN
Sbjct: 490 TTYNELLDALFRMNKYEEAFGLFQEIEA-RNLQPN 523



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 128/237 (54%), Gaps = 2/237 (0%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           +N +I  G RP ++TYT +V  L +   F    SL+ K+  +G  P++I FN  I     
Sbjct: 407 WNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCG 466

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
           +G V+ AMK+ ++M+  GC P  +TYN L+     + K EE+  L Q + + +N++PN  
Sbjct: 467 NGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEI-EARNLQPNLV 525

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           TYN ++  +     + EA  +  K +  G  PD++TYNT+  AY + G+   A Q++  +
Sbjct: 526 TYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERV 585

Query: 197 QN-NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
            +  +  P+  T   ++ G C   N+E+AM FL +     + PN   +N+L++ F D
Sbjct: 586 SSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFD 642



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 91/177 (51%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G G+   A  +   +   G  P + TY  L+ AL R  +++    L  ++E   ++P+
Sbjct: 464 LCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPN 523

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N ++   S +G + EA+++F K    G  P + TYNT+I  Y   GK + + +L++
Sbjct: 524 LVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVE 583

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            +S  K   P+  TY  L+   C+  +IEEA   + K +  GI P+  T+N L R +
Sbjct: 584 RVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/342 (20%), Positives = 143/342 (41%), Gaps = 32/342 (9%)

Query: 163 ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNME 222
           ++  Q  A TY  +     +  E    + +L +M+ + +   E     I++GY + G+ E
Sbjct: 67  SNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAE 126

Query: 223 DAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIM 282
            A++  YR+ E    P + ++N L+   L       ++   T M++ G+ P+V T++ ++
Sbjct: 127 QALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILL 186

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPD------------------------------IHV 312
            A      +    ++F +M   G  PD                              + V
Sbjct: 187 KALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPV 246

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++ L  G  + G  + A  +L  M   GV PNVV ++ +I+  C +  ++ A +++ +M 
Sbjct: 247 YNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMF 306

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
             G + N+ T+  L+ G     + + A +L ++M + G  P       +     + G   
Sbjct: 307 LRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLE 366

Query: 433 EAKRVLKSAEEDRQSMPNKKD-EIAVESIHRKQNLSASNSTF 473
           EA +V    +     +PN     I ++   +  +L  ++ T+
Sbjct: 367 EALQVCDQMQRS-GCLPNVTTYSILIDGFAKSGDLVGASETW 407


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 209/437 (47%), Gaps = 37/437 (8%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKS-------------------------------- 47
           +I EGH P   T+  L+  L R   F                                  
Sbjct: 115 MIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVLKSKVVLNAYSFGIMITGCCEAGYF 174

Query: 48  --ILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTL 105
             +  L++ +E+ G+ P+ +++  +I+ C ++G+V  A  +F KM   G  P   TY+ L
Sbjct: 175 VRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVL 234

Query: 106 IKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
           + G+   G   E  ++ + M++   + PN   YN L+  +C+   +++A+ V  +M   G
Sbjct: 235 MNGFFKQGLQREGFQMYENMNRS-GIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKG 293

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           I    +TYN L     +  +   A +++ ++    + PN  T  I+++G+C  G M+ A+
Sbjct: 294 IACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAV 353

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           R   ++K   + P LV +N+LI G+  +++  G    +  MEE  +    VT++ ++DA+
Sbjct: 354 RLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAF 413

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
           +      K  E+   M K+G+ PD++ +S+L  G    G  ++A     S+ +  + PN 
Sbjct: 414 ARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNS 473

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR-AEELLQ 404
           V++ T+I G+C      RA+ +  +M   G+ PN+ ++ + + G     + W+ AE LL 
Sbjct: 474 VIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTM-GLLCRDEKWKEAELLLG 532

Query: 405 VMEEKGVRPKKSTIQLV 421
            M   G++P  S  ++V
Sbjct: 533 QMINSGLKPSVSLYKMV 549



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/529 (20%), Positives = 223/529 (42%), Gaps = 11/529 (2%)

Query: 7   KGKPHEAH---YIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           +G  H +H   +I N L+  G  P      +L+  L   +   S++  +++         
Sbjct: 32  QGLHHTSHSISFILNHLLSSGMLPQA---QSLILRLISGRIPSSLMLQLTQAHFTSCSTY 88

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           + L++A++NA   S + D+A+     M   G  P ++T+N L+         +++  +  
Sbjct: 89  TPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFN 148

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           ++     V  N  ++ I++   C        + ++  +   G+ P+ V Y TL     + 
Sbjct: 149 VLKSK--VVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKN 206

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A+ +  +M    + PN+ T  ++++G+ K+G   +  +    M    + PN   +
Sbjct: 207 GDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAY 266

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N LI  + +    D   K    M E G+   V+T++ ++         G+  ++   + K
Sbjct: 267 NCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNK 326

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ P+I  ++IL  G+   G+   A  +   ++  G+ P +V + T+I+G+     +  
Sbjct: 327 VGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAG 386

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+ + ++M E  I  +  TY  L+  +       +A E+  +ME+ G+ P   T  ++  
Sbjct: 387 ALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIH 446

Query: 424 SWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSE 483
                G  +EA +  KS  E     PN    I    IH      +S      +  +V S 
Sbjct: 447 GXCVNGNMKEASKPFKSLGE-MHLQPN--SVIYNTMIHGYCKEGSSYRALRLLNEMVHSG 503

Query: 484 HNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQPMVVCRKQCSQV 532
              + A+   +  +L  D  W   + L      SG++P V   K   +V
Sbjct: 504 MVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKV 552


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 217/423 (51%), Gaps = 5/423 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  EA  + N ++ +G    ++TY T+V  + +    KS L+L+SK+E+  +
Sbjct: 233 INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI 292

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD ++++A+I+   + G+  +A  +F +M + G  P   TYN +I G+ + G+  ++ +
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 352

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M + + + P+  T+N L+ A   +  + EA  +  +M+   I PD VTYN++   +
Sbjct: 353 LLRDMIE-REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            ++     A+ M   M +    P+  T   I+  YC+   +++ M+ L  +    +  N 
Sbjct: 412 CKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +N+LI GF ++ + +        M   GV PD +T + ++  +     + +  E+F+ 
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +  + I+ D   ++I+  G  +  +  +A  +  S+  +GV P+V  +  +ISG+C    
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++ KM + G  P+  TY TL+ G  +A +  ++ EL+  M   G      TI++
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 647

Query: 421 VAD 423
             +
Sbjct: 648 AEE 650



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/409 (24%), Positives = 198/409 (48%), Gaps = 11/409 (2%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +F+ ++E G  P +IT+ TL+  L  + R     +L++K+   G+  D + +  ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N   + G+   A+ +  KM+++  KP    Y+ +I      G   ++  L   M + K +
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE-KGI 327

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PN  TYN ++  +CS     +A  ++  M+   I PD +T+N L  A  + G+ + AE+
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  EM +  + P+  T   ++ G+CK    +DA      M +L   P++V FN++I  + 
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK----HMFDLMASPDVVTFNTIIDVYC 443

Query: 252 DIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
             K    VD+ + L+ E    G+  +  T++T++  +     +   Q++F +M+  G+ P
Sbjct: 444 RAKR---VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D    +IL  G+    + ++A  +   ++   +  + V +  +I G C   K+  A  ++
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             +   G+ P+++TY  ++ G+        A  L   M++ G  P  ST
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNST 609



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 185/412 (44%), Gaps = 20/412 (4%)

Query: 26  RP--TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           RP  T +    ++    R  R    +SL  K+E   +  +   FN +I    +   +  +
Sbjct: 101 RPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFS 160

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ----------DKNVK- 132
           +  F K+   G +P   T+NTL+ G     +  E+L L   M +          D+ V+ 
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI 220

Query: 133 ---PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
              P   T+N L+   C +  + EA  +V KMV  G+  D VTY T+     + G+T  A
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
             +L +M+   ++P+      I+   CK+G+  DA      M E  + PN+  +N +I G
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 340

Query: 250 FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
           F          + L  M E  + PDV+TF+ ++ A    G + + +++ D+M+   I PD
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 400

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
              ++ +  G+ +      A+ +   M      P+VV F T+I  +C A ++   M +  
Sbjct: 401 TVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLR 456

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           ++   G+  N  TY TL+ G+ E      A++L Q M   GV P   T  ++
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/424 (23%), Positives = 192/424 (45%), Gaps = 20/424 (4%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKR---------------FKSILSLISKVEKDGMK 61
           F  L + G +P ++T+ TL+  L  + R               F   ++L  ++ + G+ 
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P  I FN +IN     G V EA  +  KM   G      TY T++ G   +G  + +L L
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           L  M ++ ++KP+   Y+ ++   C      +A  +  +M+  GI P+  TYN +   + 
Sbjct: 284 LSKM-EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC 342

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
            +G    A+++L +M   ++ P+  T   ++S   KEG + +A +    M    + P+ V
Sbjct: 343 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            +NS+I GF      D       LM      PDVVTF+TI+D +  A  + +  ++  ++
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
            + G+  +   ++ L  G+        A+ +   M  +GV P+ +    ++ G+C   K+
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           + A+ ++E +    I+ +   Y  ++ G  +  +   A +L   +   GV P   T  ++
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578

Query: 422 ADSW 425
              +
Sbjct: 579 ISGF 582



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/306 (21%), Positives = 139/306 (45%), Gaps = 21/306 (6%)

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
           S+++A +    MV S     AV  N +   + +      A  +  +M+  ++  N  +  
Sbjct: 86  SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---- 265
           I++  +C    +  ++    ++ +L   P++V FN+L+ G       D + +AL L    
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCL---EDRISEALALFGYM 202

Query: 266 --------------MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                         M E G+ P V+TF+T+++     G + +   + + MV  G+  D+ 
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            +  +  G  + G+ + A ++L+ M +  + P+VV+++ +I   C       A  ++ +M
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
            E GI PN+ TY  ++ G+    +   A+ LL+ M E+ + P   T   +  +    G  
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382

Query: 432 REAKRV 437
            EA+++
Sbjct: 383 FEAEKL 388



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 15/153 (9%)

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           I  +I+ F+IL K +    +   + S    + K G  P+VV F T++ G C   ++  A+
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196

Query: 366 SIY---------------EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +++               ++M EIG+ P + T+ TL+ G     +   A  L+  M  KG
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           +     T   + +    +G  + A  +L   EE
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 193/407 (47%), Gaps = 36/407 (8%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G+G+   A  + + ++     P ++TYT L+ A  ++  +K  + L+ ++   G  PD
Sbjct: 170 LCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPD 229

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N ++N   + G VD+A++  + +   GC+P T +YN ++KG     + E++ +L+ 
Sbjct: 230 IVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMG 289

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M Q K   PN  T+N+L+   C K  +E A  V+ ++   G  P++++YN L  A+   
Sbjct: 290 EMGQ-KGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAF--- 345

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                                           CK+  M+ AM FL  M     +P++V +
Sbjct: 346 --------------------------------CKQKKMDKAMAFLDLMVSRGCYPDIVSY 373

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+L+       + D   + L  +++ G  P +++++T++D  + AG   +  E+ ++MV 
Sbjct: 374 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 433

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G++PDI  +S +A G  R    + A      ++  G+ PN V++  +I G C   +   
Sbjct: 434 KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS 493

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           A+ ++  M   G  PN  TY  L+ G         A +LL  +  +G
Sbjct: 494 AIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/384 (24%), Positives = 187/384 (48%), Gaps = 6/384 (1%)

Query: 55  VEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK 114
           VE+D    D+     +I      G    A+ +  +M    C P   TY  L++       
Sbjct: 156 VERDAYTCDT-----LIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSG 210

Query: 115 PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYN 174
            ++++KLL  M +DK   P+  TYN++V   C +  +++A   +  + + G +P+ V+YN
Sbjct: 211 YKQAMKLLDEM-RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYN 269

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
            + +          AE+++ EM      PN  T  +++S  C++G +E A+  L ++ + 
Sbjct: 270 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY 329

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
              PN + +N L+  F   K  D     L LM   G  PD+V+++T++ A   +G +   
Sbjct: 330 GCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 389

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
            E+   +   G  P +  ++ +  G  +AG+ ++A  +L  M   G+ P+++ ++T+ +G
Sbjct: 390 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 449

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C   +++ A+  + K+ ++GI PN   Y  ++ G  + ++   A +L   M   G  P 
Sbjct: 450 LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPN 509

Query: 415 KSTIQLVADSWRAIGLAREAKRVL 438
           +ST  ++ +     GL +EA+ +L
Sbjct: 510 ESTYTILIEGLAYEGLIKEARDLL 533



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 190/398 (47%), Gaps = 18/398 (4%)

Query: 38  ALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKP 97
           +L R+      L L+    +    PD+    A+I   S SG   EA ++      + C P
Sbjct: 76  SLVRRGELDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEARRVL-----AACGP 126

Query: 98  TTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
               YN ++ GY   G+ + + +       ++ V+ +  T + L+R  C +     A  V
Sbjct: 127 DVMAYNAMMAGYCGAGQVDAARR----WCAERAVERDAYTCDTLIRGLCGRGRTANALAV 182

Query: 158 VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
           + +M+     PD VTY  L  A  +     +A ++L EM++    P+  T  ++V+G C+
Sbjct: 183 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 242

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
           EG ++DA+ FL  +      PN V +N ++KG    +  +  ++ +  M + G  P+VVT
Sbjct: 243 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 302

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           F+ ++      GL+    E+ + + K G  P+   ++ L   + +  +  KA + L  M 
Sbjct: 303 FNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 362

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
             G +P++V + T+++  C + ++  A+ +  ++ + G  P L +Y T++ G  +A +  
Sbjct: 363 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 422

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
            A ELL  M  KG++P      ++  S  A GL RE +
Sbjct: 423 EALELLNEMVSKGLQP-----DIITYSTIAAGLCREDR 455



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 8/238 (3%)

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           RP+  TC  ++      G   +A R L         P+++ +N+++ G+     +  VD 
Sbjct: 95  RPDAGTCAALIKKLSASGRTAEARRVLA-----ACGPDVMAYNAMMAGYCG---AGQVDA 146

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           A     E  V+ D  T  T++      G       + D+M++    PD+  ++IL +   
Sbjct: 147 ARRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATC 206

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           +    ++A  +L  MR  G  P++V +  V++G C   ++  A+   + +   G  PN  
Sbjct: 207 KRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 266

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           +Y  +L G   A++   AEEL+  M +KG  P   T  ++       GL   A  VL+
Sbjct: 267 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLE 324


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 216/428 (50%), Gaps = 7/428 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L+  G   EA  ++  ++ EG +P+L TY+ L+ AL +++  + ++ L+ ++E  G+
Sbjct: 199 IHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGL 258

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+   F   I     +G +DEA +IF++M D GC P   TY  LI    N G+ E + +
Sbjct: 259 RPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKE 318

Query: 121 LLQLMSQDKNVKPNDRTYNILV---RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           L   M  + + KP+   Y  L+     +   ++ +E W+   +M A G  PD VT+  L 
Sbjct: 319 LFVKMKANGH-KPDQVIYITLLDKFNDFGDLDTFKEFWS---QMEADGYMPDVVTFTILV 374

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               +  +   A      M+   + PN  T   ++ G  + G +EDA++ L  M+ + V 
Sbjct: 375 DVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQ 434

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P    + + I  F    ++    +    M+  G+ P++V  +  + + +  G + + + +
Sbjct: 435 PTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTM 494

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F+ + + G+ PD   ++++ K Y + G+  +A ++L+ M + G  P+V++  ++I     
Sbjct: 495 FNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYK 554

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           A ++  A  ++++M ++ ++P + TY TLL G G+  +  +A EL + M  K   P   +
Sbjct: 555 AGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTIS 614

Query: 418 IQLVADSW 425
              + D +
Sbjct: 615 FNTLLDCF 622



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 198/392 (50%), Gaps = 7/392 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L   GK  EA+ IF  + +EG  P L+TYT L+ AL    + ++   L  K++ +G 
Sbjct: 269 IRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH 328

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD +++  +++  ++ G++D   + + +M+  G  P   T+  L+         +E+  
Sbjct: 329 KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFA 388

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
              +M + + + PN  TYN L+        IE+A  ++  M + G+QP A TY T    +
Sbjct: 389 TFDVMRK-QGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYF 447

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + GET +A +   +M+   + PN   C   +    + G + +A      ++E  + P+ 
Sbjct: 448 GKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDS 507

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +N ++K +  +     VD+A+ L+ E    G +PDV+  ++++D+   AG + +  ++
Sbjct: 508 VTYNMMMKCYSKVGQ---VDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQM 564

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           FD M    + P +  ++ L  G  + G  QKA  +  SM      PN + F T++  +C 
Sbjct: 565 FDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCK 624

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             +++ A+ ++ KM  +   P++ TY T+++G
Sbjct: 625 NDEVELALKMFSKMTVMDCKPDVLTYNTVIYG 656



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 188/413 (45%), Gaps = 36/413 (8%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           R  L TY T+  AL+ +   + + ++++K+ K G   ++  +N +I+   +SG   EA++
Sbjct: 154 RRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALE 213

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           ++++M   G KP+  TY+ L+   G     E  + LL+ M +D  ++PN  T+ I +R  
Sbjct: 214 VYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEM-EDLGLRPNVYTFTICIRVL 272

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                I+EA+ +  +M   G  PD VTY                                
Sbjct: 273 GRAGKIDEAYEIFRRMDDEGCGPDLVTYT------------------------------- 301

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
               +++   C  G +E+A     +MK     P+ V++ +L+  F D  D D   +  + 
Sbjct: 302 ----VLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQ 357

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           ME  G  PDVVTF+ ++D    A    +    FD M K GI P++H ++ L  G +RAG 
Sbjct: 358 MEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGR 417

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            + A  +L +M   GV P    + T I  +  + +  +A+  +EKM   GI PN+     
Sbjct: 418 IEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNA 477

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            L+   E  +   A+ +   + E G+ P   T  ++   +  +G   EA  +L
Sbjct: 478 SLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLL 530



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 171/338 (50%), Gaps = 10/338 (2%)

Query: 13   AHYIFNCLIEE-GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
            A+ IF+   ++ G  PTL +Y  L+  L      +    L   ++  G  PD+  FN ++
Sbjct: 771  AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830

Query: 72   NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-QLMSQDKN 130
                +SG + E  +++++M    CKP   TYN +I         +++L     L+S D  
Sbjct: 831  AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSD-- 888

Query: 131  VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
             +P  RTY  L+        +EEA  +  +M   G +P+   +N L   Y + G+T  A 
Sbjct: 889  FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETAC 948

Query: 191  QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            Q+   M N  +RP+ ++  I+V   C  G +++A+ +   +K   + P+ + +N +I G 
Sbjct: 949  QLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIING- 1007

Query: 251  LDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
              +  S  +++AL L  E    G+ PD+ T++++M     AG++ + + +++++  AG+E
Sbjct: 1008 --LGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLE 1065

Query: 308  PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
            PD+  ++ L +GY  +  P+ A ++  +M   G +PN+
Sbjct: 1066 PDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNI 1103



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 179/395 (45%), Gaps = 2/395 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+   A  +F  +   GH+P  + Y TL+          +     S++E DG 
Sbjct: 304 IDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGY 363

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + F  +++   ++ + DEA   F  M+  G  P   TYNTLI G    G+ E++LK
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALK 423

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M +   V+P   TY   +  +       +A     KM A GI P+ V  N    + 
Sbjct: 424 LLDTM-ESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSL 482

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+ G    A+ M   ++ N + P+  T  +++  Y K G +++A+  L  M      P++
Sbjct: 483 AEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDV 542

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +V NSLI         D   +    M++  + P VVT++T++      G + K  E+F+ 
Sbjct: 543 IVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFES 602

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+     P+   F+ L   + +  E + A  + + M      P+V+ + TVI G     K
Sbjct: 603 MIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENK 662

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           +  A   + ++ +  ++P+  T  TLL G  +  Q
Sbjct: 663 VNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQ 696



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 171/338 (50%), Gaps = 6/338 (1%)

Query: 83   AMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV--KPNDRTYN 139
            A +IF K  K  G  PT ++YN LI     V   E++  L + M   KNV   P+  T+N
Sbjct: 771  AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDM---KNVGCAPDAFTFN 827

Query: 140  ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            +L+        I E + +  +M++   +PDA+TYN +  + A+     +A    +++ ++
Sbjct: 828  MLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSS 887

Query: 200  QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              RP  RT G ++ G  K G +E+AMR    M +    PN  +FN LI G+  I D++  
Sbjct: 888  DFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETA 947

Query: 260  DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
             +    M   G++PD+ +++ ++D    AG + +    F+++   G++PD   ++ +  G
Sbjct: 948  CQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIING 1007

Query: 320  YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
              ++   ++A ++   MR  G+ P++  + +++     A  +++A  +YE++   G+ P+
Sbjct: 1008 LGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPD 1067

Query: 380  LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            + TY  L+ GY  ++ P  A  + + M   G  P   T
Sbjct: 1068 VFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGT 1105



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 174/356 (48%), Gaps = 8/356 (2%)

Query: 35   LVAALTRQKRFKSILSLISKVEKD-GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS 93
            LV  L + KR      +  K  K  G+ P    +N +I    E    ++A  +F+ MK+ 
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817

Query: 94   GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
            GC P   T+N L+  +G  GK  E  +L + M   +  KP+  TYNI++ +    N++++
Sbjct: 818  GCAPDAFTFNMLLAVHGKSGKITELFELYKEMIS-RRCKPDAITYNIVISSLAKSNNLDK 876

Query: 154  AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
            A +  Y +V+S  +P   TY  L    A+ G    A ++  EM +   +PN     I+++
Sbjct: 877  ALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILIN 936

Query: 214  GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---G 270
            GY K G+ E A +   RM    + P+L  +  L+     +  +  VD+AL    E    G
Sbjct: 937  GYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDC---LCLAGRVDEALYYFNELKSTG 993

Query: 271  VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
            + PD + ++ I++    +  M +   ++++M   GI PD++ ++ L      AG  ++A+
Sbjct: 994  LDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAK 1053

Query: 331  SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             +   ++  G+ P+V  +  +I G+  +   + A ++Y+ M   G NPN+ TY  L
Sbjct: 1054 RMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 207/455 (45%), Gaps = 17/455 (3%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  EA  +FN L E G  P  +TY  ++   ++  +    ++L+S++ ++G +PD
Sbjct: 482 LAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I+ N++I++  ++G VDEA ++F +MKD    PT  TYNTL+ G G  G+ +++++L +
Sbjct: 542 VIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFE 601

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K   PN  ++N L+  +C  + +E A  +  KM     +PD +TYNT+     + 
Sbjct: 602 SMIX-KKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKE 660

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR----FLYRMKELEVHPN 239
            +   A     +++ + + P+  T   ++ G  K G + DA+     F+Y+++      N
Sbjct: 661 NKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVR---FRVN 716

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
              +  L+ G L   +   +DKA+   EE    G+  +      ++             +
Sbjct: 717 RSFWEDLMGGTLVEAE---MDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQ 773

Query: 297 IFDDMVKA-GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           IFD   K  GI P +  ++ L    +     +KA  +   M+  G  P+   F  +++  
Sbjct: 774 IFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVH 833

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
             + K+     +Y++M      P+  TY  ++    ++    +A +    +     RP  
Sbjct: 834 GKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            T   + D    +G   EA R+ +    D    PN
Sbjct: 894 RTYGPLIDGLAKVGRLEEAMRLFEEM-SDYGCKPN 927



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 170/377 (45%), Gaps = 1/377 (0%)

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N M+        V++   +F+ M+    +    TY T+ K     G   +   +L  M +
Sbjct: 126 NFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRK 185

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              V  N  +YN L+          EA  V  +MV+ G++P   TY+ L  A  +  ++ 
Sbjct: 186 AGFVL-NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSE 244

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
               +L EM++  +RPN  T  I +    + G +++A     RM +    P+LV +  LI
Sbjct: 245 MVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLI 304

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
               +    +   +    M+  G KPD V + T++D ++  G +   +E +  M   G  
Sbjct: 305 DALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYM 364

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+  F+IL     +A +  +A +    MRK G+ PN+  + T+I G   A +++ A+ +
Sbjct: 365 PDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKL 424

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
            + M  +G+ P   TY T +  +G++ +  +A E  + M+ KG+ P          S   
Sbjct: 425 LDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAE 484

Query: 428 IGLAREAKRVLKSAEED 444
           +G  REAK +     E+
Sbjct: 485 MGRLREAKTMFNGLREN 501



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 147/312 (47%), Gaps = 42/312 (13%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            GK  E   ++  +I    +P  ITY  ++++L +       L     +     +P    +
Sbjct: 837  GKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTY 896

Query: 68   NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
              +I+  ++ G ++EAM++F++M D GCKP  + +N LI GYG +G  E + +L + M  
Sbjct: 897  GPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMV- 955

Query: 128  DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            ++ ++P+ ++Y ILV   C    ++EA     ++ ++G+ PD + YN             
Sbjct: 956  NEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNR------------ 1003

Query: 188  RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
                                   I++G  K   ME+A+     M+   + P+L  +NSL+
Sbjct: 1004 -----------------------IINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM 1040

Query: 248  KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
               L++  +  V++A  + EE    G++PDV T++ ++  +S +        ++ +M+  
Sbjct: 1041 ---LNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVD 1097

Query: 305  GIEPDIHVFSIL 316
            G  P+I  ++ L
Sbjct: 1098 GCNPNIGTYAQL 1109



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/423 (20%), Positives = 184/423 (43%), Gaps = 22/423 (5%)

Query: 26   RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
            +P ++TY T++  L ++ +         +++K  M PD +    ++    + G + +A+ 
Sbjct: 644  KPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAIS 702

Query: 86   IFQK-MKDSGCKPTTSTYNTLIKGY---GNVGKP---EESLKLLQLMSQDKNVKPNDRTY 138
            I +  M     +   S +  L+ G      + K     E L L  +  +D  + P     
Sbjct: 703  IARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIP----- 757

Query: 139  NILVRAWCSKNSIEEAWNVVYKMVAS-GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
              LVR  C       A+ +  K     GI P   +YN L     +   T +A  +  +M+
Sbjct: 758  --LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMK 815

Query: 198  NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
            N    P+  T  ++++ + K G + +       M      P+ + +N +I     +  S+
Sbjct: 816  NVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISS---LAKSN 872

Query: 258  GVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
             +DKAL    +      +P   T+  ++D  +  G + +   +F++M   G +P+  +F+
Sbjct: 873  NLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFN 932

Query: 315  ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            IL  GY + G+ + A  +   M   G+ P++  +T ++   C A ++  A+  + ++   
Sbjct: 933  ILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992

Query: 375  GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
            G++P+   Y  ++ G G++++   A  L   M  +G+ P   T   +  +    G+  +A
Sbjct: 993  GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052

Query: 435  KRV 437
            KR+
Sbjct: 1053 KRM 1055



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 148/367 (40%), Gaps = 71/367 (19%)

Query: 98  TTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
           TT T N +++      K E+   + + M Q K ++ +  TY  + +A   +  + +   V
Sbjct: 121 TTETCNFMLEFLRVHDKVEDMAAVFEFM-QKKIIRRDLDTYLTIFKALSIRGGLRQMTTV 179

Query: 158 VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
           + KM  +G   +A +YN L                                 +I SG+C 
Sbjct: 180 LNKMRKAGFVLNAYSYNGLIHL------------------------------LIQSGFCG 209

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
           E     A+    RM    + P+L  +++L+      +DS+ V   L  ME+ G++P+V T
Sbjct: 210 E-----ALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYT 264

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           F+  +     AG + +  EIF  M   G  PD+  +++L      AG+ + A+ +   M+
Sbjct: 265 FTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMK 324

Query: 338 ----------------KY-------------------GVHPNVVMFTTVISGWCNAVKMQ 362
                           K+                   G  P+VV FT ++   C A    
Sbjct: 325 ANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFD 384

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A + ++ M + GI PNL TY TL+ G   A +   A +LL  ME  GV+P   T     
Sbjct: 385 EAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFI 444

Query: 423 DSWRAIG 429
           D +   G
Sbjct: 445 DYFGKSG 451


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 188/380 (49%), Gaps = 8/380 (2%)

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKD-SGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +P+++ +N +I      G V  A+ I ++M++  G  P   TY T+I G+  VG+ +E++
Sbjct: 142 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 201

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K+   M     VKP    YN L+  +C +  ++ A     +MV  G+     TYN L  A
Sbjct: 202 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 261

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
               G    A +++ EM    + P+  T  I+++G+CKEGN++ A+     M    V   
Sbjct: 262 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 321

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +V + +LI            DK        G++PD+V ++ ++++ S++G + +  EI  
Sbjct: 322 VVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG 381

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M K  I PD   ++ L +G    G   +A  ++  M + G+ P++V + T+ISG+    
Sbjct: 382 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKG 441

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST-I 418
            ++ A+ I  +M   G NP L TY  L+ G  +  Q   AE +++ M E G+ P  ST I
Sbjct: 442 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 501

Query: 419 QLVADSWRAIGLAREAKRVL 438
            L+       GL  E +R +
Sbjct: 502 SLIE------GLTTEDERAI 515



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 89/389 (22%), Positives = 184/389 (47%), Gaps = 42/389 (10%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG---- 59
           L   GKP  A      L+ +  RP  +TY T++A    + R ++ L ++ ++ + G    
Sbjct: 124 LCSAGKPARALE----LLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAP 179

Query: 60  ---------------------------------MKPDSILFNAMINACSESGNVDEAMKI 86
                                            +KP+++++NA+I    + G +D A+  
Sbjct: 180 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 239

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M + G   T +TYN L+      G+  E+ +L++ M   K + P+  TYNIL+   C
Sbjct: 240 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG-GKGLAPDVFTYNILINGHC 298

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            + ++++A  +   M   G++   VTY  L  A ++ G+    +++  E     +RP+  
Sbjct: 299 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV 358

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               +++ +   GN++ A   +  M++  + P+ V +N+L++G   +   D   K +  M
Sbjct: 359 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 418

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            E G++PD+VT++T++  +S  G +     I ++M+  G  P +  ++ L +G  + G+ 
Sbjct: 419 TERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG 478

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGW 355
             AE+++  M + G+ P+   + ++I G 
Sbjct: 479 DDAENMVKEMVENGITPDDSTYISLIEGL 507



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 147/290 (50%), Gaps = 5/290 (1%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N L+G    +GK   A    + ++E G   T+ TY  LV AL    R      L+ ++  
Sbjct: 221 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 280

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+ PD   +N +IN   + GNV +A++IF+ M   G + T  TY  LI      G+ +E
Sbjct: 281 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQE 340

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           + KL     + + ++P+   YN L+ +  +  +I+ A+ ++ +M    I PD VTYNTL 
Sbjct: 341 TDKLFDEAVR-RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 399

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
           R     G    A +++ EM    ++P+  T   ++SGY  +G+++DA+R    M     +
Sbjct: 400 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 459

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
           P L+ +N+LI+G       D  +  +  M E G+ PD  T+ ++++  ++
Sbjct: 460 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTT 509



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 125/221 (56%), Gaps = 5/221 (2%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NIL+     +G   +A  IF  +   G R T++TYT L+ AL+++ + +    L  +  +
Sbjct: 291 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 350

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G++PD +L+NA+IN+ S SGN+D A +I  +M+     P   TYNTL++G   +G+ +E
Sbjct: 351 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 410

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           + KL+  M++ + ++P+  TYN L+  +  K  +++A  +  +M+  G  P  +TYN L 
Sbjct: 411 ARKLIDEMTE-RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 469

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
           +   + G+   AE M+ EM  N + P++ T   ++ G   E
Sbjct: 470 QGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 510



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/407 (21%), Positives = 174/407 (42%), Gaps = 49/407 (12%)

Query: 45  FKSILSLISKVEKDGMKPD-----SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTT 99
           FKS+LS    +    + P      S L N ++ A +       +++++ +MK      +T
Sbjct: 24  FKSVLSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPIST 83

Query: 100 STYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVY 159
           ++ + L+    +      +  L   M + + +     T+NI++R  CS      A  ++ 
Sbjct: 84  ASLHPLLSALPSA----PAFALFADMFRLR-LPLCTTTFNIMLRHLCSAGKPARALELLR 138

Query: 160 KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM-QNNQVRPNERTCGIIVSGYCKE 218
           +M     +P+AVTYNT+   +   G    A  ++ EM +   + PN+ T G ++SG+CK 
Sbjct: 139 QMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 194

Query: 219 GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTF 278
           G +++A++               VF                D+ LT  E   VKP+ V +
Sbjct: 195 GRVDEAVK---------------VF----------------DEMLTKGE---VKPEAVMY 220

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           + ++  +   G +       D MV+ G+   +  +++L       G   +A  ++  M  
Sbjct: 221 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 280

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            G+ P+V  +  +I+G C    +++A+ I+E M   G+   + TY  L++   +  Q   
Sbjct: 281 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQE 340

Query: 399 AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
            ++L      +G+RP       + +S    G    A  ++   E+ R
Sbjct: 341 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 387


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 202/432 (46%), Gaps = 2/432 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK   A   F+ +   G  P  +TYT+++  L +  R    + +  ++E++   P +  +
Sbjct: 282 GKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAY 341

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N MI     +G  DEA  + ++ K  GC P+   YN ++   G  G+  E+L+  + M +
Sbjct: 342 NTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK 401

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D    PN  TYN+L+   C    +E A+ V   M  +G+ P+ +T N +     +  +  
Sbjct: 402 D--AAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLD 459

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +   M +    P+E T   ++ G  K+G ++DA R   +M + +  PN VV+ SLI
Sbjct: 460 EACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLI 519

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           K F      +   K    M   G  PD+   +  MD    AG  GK + +F+++   G  
Sbjct: 520 KSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFI 579

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+  +SIL  G V+AG  ++   +  +M++ G   +   + T I G+C + K+ +A  +
Sbjct: 580 PDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQL 639

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
            E+M   G  P + TY +++ G  +  +   A  L +  +  G+         + D +  
Sbjct: 640 LEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGK 699

Query: 428 IGLAREAKRVLK 439
           +G   EA  +++
Sbjct: 700 VGRIDEAYLIME 711



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/453 (22%), Positives = 207/453 (45%), Gaps = 10/453 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L   G+   A  + + + E G  P ++T   ++  L + K+     S+   +     
Sbjct: 414 IDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKIC 473

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + F ++I+   + G VD+A +++++M DS   P    Y +LIK +   G+ E+  K
Sbjct: 474 SPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHK 533

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M   +   P+ R  N  +          +   +  ++ + G  PD ++Y+ L    
Sbjct: 534 IFKEMIH-RGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGL 592

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G      ++ + M+      +       + G+CK G +  A + L  MK     P +
Sbjct: 593 VKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTV 652

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V + S+I G   I   D +D+A  L EE    G++ +VV +S+++D +   G + +   I
Sbjct: 653 VTYGSVIDGLAKI---DRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLI 709

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            +++++ G+ P+++ ++ L    V+A E  +A     +M+     PN + ++ +I+G C 
Sbjct: 710 MEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCR 769

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             K  +A   +++M + G+ PN  TY T++ G  +A     A  L +  +  G  P  ++
Sbjct: 770 VRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSAS 829

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
              + +    +  +R A    K  EE R    N
Sbjct: 830 YNAIIE---GLSYSRRAMEAYKIFEETRMKGCN 859



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/427 (24%), Positives = 192/427 (44%), Gaps = 8/427 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L    +  EA  IF  + +  + P    Y T++       +F    SL+ + +  G 
Sbjct: 310 IGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGC 369

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  I +N ++    + G + EA++ F++MK     P  STYN LI      G+ E + K
Sbjct: 370 IPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDA-APNLSTYNVLIDMLCKAGEVEAAFK 428

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M ++  + PN  T NI++   C    ++EA ++   M      PD VT+ +L    
Sbjct: 429 VRDAM-KEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGL 487

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A ++  +M ++   PN      ++  + K G  ED  +    M      P+L
Sbjct: 488 GKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDL 547

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
            + N+ +       ++    K   L EE    G  PDV+++S ++     AG   +  E+
Sbjct: 548 RLLNAYMDCVFKAGET---GKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYEL 604

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F  M + G   D H ++    G+ ++G+  KA  +L  M+  G  P VV + +VI G   
Sbjct: 605 FYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAK 664

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             ++  A  ++E+    G+  N+  Y +L+ G+G+  +   A  +++ + +KG+ P   T
Sbjct: 665 IDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 724

Query: 418 IQLVADS 424
              + D+
Sbjct: 725 WNCLLDA 731



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/435 (22%), Positives = 189/435 (43%), Gaps = 2/435 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  E   +  C+ +   RP    YTTL+ AL+  +    +L+L  ++++ G +    LF 
Sbjct: 178 KLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFT 237

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I   +  G +D A+ +  +MK +        YN  I  +G  GK + + K    + + 
Sbjct: 238 TVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEI-KS 296

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
             + P+D TY  ++   C  N ++EA  +  +M  +   P A  YNT+   Y   G+   
Sbjct: 297 HGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDE 356

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  +L   +     P+      I++   K+G + +A+R    MK+ +  PNL  +N LI 
Sbjct: 357 AYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK-DAAPNLSTYNVLID 415

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
                 + +   K    M+E G+ P+V+T + ++D    A  + +   IF+ M      P
Sbjct: 416 MLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSP 475

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D   F  L  G  + G    A  +   M      PN V++T++I  +    + +    I+
Sbjct: 476 DEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIF 535

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           ++M   G +P+L+     +    +A +  +   L + ++ +G  P   +  ++       
Sbjct: 536 KEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKA 595

Query: 429 GLAREAKRVLKSAEE 443
           G ARE   +  + +E
Sbjct: 596 GFARETYELFYAMKE 610



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/412 (21%), Positives = 190/412 (46%), Gaps = 8/412 (1%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
            Y +L+  + +  +F     ++ ++   G  P +     +I +C +S  + E   + Q M
Sbjct: 130 AYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCM 189

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
           +    +P  S Y TLI    +V + +  L L   M Q+   + +   +  ++R +  +  
Sbjct: 190 RKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQM-QELGYEVSVHLFTTVIRVFAREGR 248

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           ++ A +++ +M ++ +  D V YN     + + G+   A +   E++++ + P++ T   
Sbjct: 249 LDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTS 308

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE-- 268
           ++   CK   +++A+    +M++    P    +N++I G+     +   D+A +L+E   
Sbjct: 309 MIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGY---GSAGKFDEAYSLLERQK 365

Query: 269 -FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
             G  P V+ ++ I+      G +G+    F++M K    P++  +++L     +AGE +
Sbjct: 366 ARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVE 424

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            A  +  +M++ G+ PNV+    +I   C A K+  A SI+E M     +P+  T+ +L+
Sbjct: 425 AAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLI 484

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            G G+  +   A  L + M +    P       +  S+   G   +  ++ K
Sbjct: 485 DGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFK 536



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/283 (22%), Positives = 128/283 (45%), Gaps = 4/283 (1%)

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
           P+A  Y++L    A+  +    EQ+L EM      P+ +TC  ++    K   + +    
Sbjct: 128 PEA--YDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDL 185

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
           +  M++ +  P    + +LI     +++SD +      M+E G +  V  F+T++  ++ 
Sbjct: 186 IQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAR 245

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
            G +     + D+M    +  DI ++++    + +AG+   A      ++ +G+ P+ V 
Sbjct: 246 EGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVT 305

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           +T++I   C   ++  A+ I+E+M +    P    Y T++ GYG A +   A  LL+  +
Sbjct: 306 YTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQK 365

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            +G  P       +       G   EA R  +  ++D  + PN
Sbjct: 366 ARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKD--AAPN 406



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 99/213 (46%), Gaps = 1/213 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA+ +F      G    ++ Y++L+    +  R      ++ ++ + G+ P+   +N ++
Sbjct: 670 EAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL 729

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +A  ++  ++EA+  FQ MK+    P   TY+ LI G   V K  ++    Q M Q + +
Sbjct: 730 DALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEM-QKQGL 788

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KPN  TY  ++       +I EA ++  +  A+G  PD+ +YN +    +       A +
Sbjct: 789 KPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYK 848

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           +  E +      + +TC  ++    K+  +E A
Sbjct: 849 IFEETRMKGCNIHTKTCIALLDALQKDECLEQA 881


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 206/422 (48%), Gaps = 8/422 (1%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSIL---SLISKVEKDGMKPDSI 65
           +PH  H IFN +     RP L+T  TL+ AL R     S++    +     K G++P+  
Sbjct: 153 QPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVN 212

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            FN +I+      N +EA+++  +M + GC P   TYNT++     + K  +  ++  L+
Sbjct: 213 TFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTA---LCKRSQLTQVRDLL 269

Query: 126 SQDKN--VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            Q KN  + PN  TYNILV  +C    ++EA  V+  M   G+ PD  TYNT+ R     
Sbjct: 270 LQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDE 329

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A ++  +M++ ++ P+  T   ++ G  +    + A + +  MK   V  N V  
Sbjct: 330 GKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTH 389

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N +IK F      D     +  M E G  PD  T++T+++ +  AG M +  ++ D+M +
Sbjct: 390 NIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGR 449

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G++ D    + L        +   A ++    RK G   + V + T+I G+    +  R
Sbjct: 450 KGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADR 509

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+ ++E+M E GI   + TY T++ G   + +  +A + L  + EKG+ P +ST  ++  
Sbjct: 510 ALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIH 569

Query: 424 SW 425
            +
Sbjct: 570 GY 571



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 207/424 (48%), Gaps = 2/424 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P   TY  LV    + K  K    +I  +   GM PD   +N M+    + G +DEA
Sbjct: 276 GLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEA 335

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +++  KM+     P   TYNTLI G       + + KL++ M + + VK N  T+NI+++
Sbjct: 336 VRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEM-KARGVKENGVTHNIMIK 394

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +C++  I+EA NV+ KMV SG  PD  TYNT+   Y + G+   A +M+ EM    ++ 
Sbjct: 395 WFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKL 454

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   ++   C E  ++DA     + ++     + V + +LI G+   + +D   K  
Sbjct: 455 DTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLW 514

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M+E G+   ++T++TI+     +G   +  +  +++++ G+ PD    +I+  GY   
Sbjct: 515 EEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWE 574

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G  +KA      M ++ + P++     ++ G C    +++ ++++      G   +  TY
Sbjct: 575 GAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTY 634

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV-LKSAE 442
             ++  + + ++   A +L+  ME K + P + T   +       G   EA+++ LK AE
Sbjct: 635 NIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAE 694

Query: 443 EDRQ 446
           + +Q
Sbjct: 695 KGQQ 698



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/411 (21%), Positives = 178/411 (43%), Gaps = 47/411 (11%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  EA  +   ++E G  P   TY T++    +  +      ++ ++ + G+K D+  
Sbjct: 399 EGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFT 458

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            N +++       +D+A  +  K +  G      TY TLI GY    + + +LKL + M 
Sbjct: 459 LNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEM- 517

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++  +     TYN ++R  C     ++A + + +++  G+ PD  T N +   Y   G  
Sbjct: 518 KETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAV 577

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A Q   +M  + ++P+  TC I++ G C+EG +E                 L +FN+ 
Sbjct: 578 EKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKG---------------LTLFNTW 622

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I                      G   D VT++ I+ ++     +    ++  +M    +
Sbjct: 623 ISK--------------------GKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNL 662

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG-------VHPNV----VMFTTVISGW 355
           EPD + ++ +  G  +AG  ++AE +     + G         P +    +M++  IS  
Sbjct: 663 EPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSL 722

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
           C   K + AM ++++  + G++ N  TY  L+ G  + ++ +    LL  M
Sbjct: 723 CTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLLPFM 773



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 137/275 (49%), Gaps = 6/275 (2%)

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
           P  +   +LA AY    + +   Q+  +M+  + RPN  TC  +++   +  N   ++ F
Sbjct: 137 PKPLLDTSLA-AYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVR-SNSSHSLVF 194

Query: 228 LYRMKE----LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD 283
              + +    L V PN+  FN LI G+    +++   + +  M E+G  PD VT++T++ 
Sbjct: 195 SREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLT 254

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
           A      + + +++   M  +G+ P+ + ++IL  GY +    ++A  ++  M   G+ P
Sbjct: 255 ALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLP 314

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           +V  + T++ G C+  K+  A+ + +KM    + P++ TY TL+ G  E +    A +L+
Sbjct: 315 DVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLV 374

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           + M+ +GV+    T  ++   +   G   EA  V+
Sbjct: 375 EEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVM 409


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 200/410 (48%), Gaps = 7/410 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G+ P ++TYT+L+  L  + R      L  +++K G  P+ + +  +I     +GN
Sbjct: 152 IMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGN 211

Query: 80  VDEAMKIFQKMKDS------GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP 133
           ++ A+K+ Q+M +        CKP   +YN +I     +GK +E+ +L   M  D+ V+P
Sbjct: 212 INLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMV-DQGVRP 270

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           +  T++ L+   C +  + EA   +  M+  GI PD  T+ +L   +   G+   A+++ 
Sbjct: 271 DVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELF 330

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
             M +    P+  +  +++ GYCK  N+E+AM+    M  +   P++  F  L+KG    
Sbjct: 331 LSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLA 390

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
                  K   +++   V  ++   S  +D     G + +  E+F+++    ++ DI  F
Sbjct: 391 GKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESF 450

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           + L  G  +A + + A  +   + + G+ P+VV +  +I+G+C   ++  A  +++ M E
Sbjct: 451 NCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEE 510

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
            G  PNL TY  LL G+ +  +     +LL  M +K V    S   +V D
Sbjct: 511 NGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVED 560



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 186/399 (46%), Gaps = 5/399 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P   T   L+  L    R +  LS ++ + + G  PD + + ++I        + EA
Sbjct: 121 GLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEA 180

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK-----NVKPNDRTY 138
            ++F +M+  GC P   TY TLIKG    G    +LKL Q M         N KPN  +Y
Sbjct: 181 TRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSY 240

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           NI++   C     +EA  +  +MV  G++PD VT++ L     + G    A++ L  M  
Sbjct: 241 NIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMML 300

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
             + P+  T   ++ G+C  G+++ A      M      P+++ +  LI G+    + + 
Sbjct: 301 RGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEE 360

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
             K    M   G  PD+ TF  ++     AG +G  +++F  +    +  ++++ S+   
Sbjct: 361 AMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLD 420

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           G  + G   +A  +   ++ Y +  ++  F  +I G C A K++ A  ++EK+ + G+ P
Sbjct: 421 GLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQP 480

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           ++ TY  ++ G+ +  Q   A  L Q+MEE G  P   T
Sbjct: 481 DVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLT 519



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 23/108 (21%), Positives = 51/108 (47%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  L +EG +P ++TY  ++    +  +  +   L   +E++G  P+ + ++A+++   
Sbjct: 469 LFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFY 528

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++  ++E +K+  KM         S Y  +        K  E L +LQ
Sbjct: 529 KNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQ 576


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 189/376 (50%), Gaps = 7/376 (1%)

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           ++P++  +N +I+   E G V +A+ +   M   GC P   TYN L++         +++
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +L+ LM + +   PN+ TYN+L+   C +  +++A  ++  + + G +P  V YNT+ + 
Sbjct: 63  ELIDLM-RAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKG 121

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
                    A++++ EM      PNE T  +++   C++G ++ A++ L +M +     N
Sbjct: 122 LCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTAN 181

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +V +N++I G  + ++ DG    L+ M+ +G KPD+VT++T++    SA      +E+ D
Sbjct: 182 IVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMD 241

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M + G  PD   F+ L     + G    A  +   M   G  PN + ++T+ISG   A 
Sbjct: 242 NMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKAT 301

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           K+ +A+ ++ +M   G NP+ K Y+ L     +      A + ++ +++ G+ P      
Sbjct: 302 KLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYN 360

Query: 420 LVADSWRAIGLAREAK 435
            +      +GL R  K
Sbjct: 361 AI-----LLGLCRNGK 371



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 204/405 (50%), Gaps = 6/405 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G+  +A  + + ++  G  P ++TY  L+ A  + + ++  + LI  +  +G 
Sbjct: 14  IHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGC 73

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+++ +N +++     G+VD+A+++ + +   GCKP+T  YNT++KG  +  +  ++ +
Sbjct: 74  TPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADE 133

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L+  M ++ N  PN+ T+N+++ + C K  +++A  ++ KM   G   + VTYN +    
Sbjct: 134 LVTEMLRE-NCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGL 192

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A  +L +M++   +P+  T   ++ G C      DA   +  M +    P+ 
Sbjct: 193 CEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDN 252

Query: 241 VVFNSLIKGFLDIKD--SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           V FN+LI GFL  K    D ++     M + G  P+ +T+STI+   + A  + +  E+F
Sbjct: 253 VTFNTLI-GFLCQKGLMVDAIE-VFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELF 310

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           ++M   G  PD  ++ +LA+        ++A   +  ++  G+ P+ V++  ++ G C  
Sbjct: 311 NEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRN 369

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
            K + A+ I   M   G  P+  TY  L+ G         A ELL
Sbjct: 370 GKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 414



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/444 (24%), Positives = 204/444 (45%), Gaps = 5/444 (1%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P   TY  L+  L  + + +  LS++  +   G  PD + +N ++ A  +     +AM+
Sbjct: 4   QPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME 63

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +   M+  GC P   TYN L+ G    G  +++L+LL+ +      KP+   YN +++  
Sbjct: 64  LIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPS-HGCKPSTVNYNTVLKGL 122

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           CS     +A  +V +M+     P+  T+N +  +  + G   +A Q+L +M  +    N 
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   I++G C++ N++ AM  L +MK     P++V +N+L+KG          ++ +  
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M + G  PD VTF+T++      GLM    E+F  M   G  P+   +S +  G  +A +
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 302

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A  +   M   G +P+ + +  +     +   ++ A+    K+ + GI+P+   Y  
Sbjct: 303 LDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNA 361

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
           +L G     +   A +++  M   G  P   T  ++ +     G   EA+ +L      R
Sbjct: 362 ILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCS-R 420

Query: 446 QSMPNKKDEIAVESIHRKQNLSAS 469
             + N    I  E++   QN+ AS
Sbjct: 421 DVLVNSL--IKSEALLLDQNIHAS 442



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 126/285 (44%), Gaps = 1/285 (0%)

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           +QP+A TYN L     + G+   A  +L +M      P+  T  I++   CK      AM
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
             +  M+     PN V +N L+ G     D D   + L  +   G KP  V ++T++   
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
            SA   G   E+  +M++    P+   F+++     R G  Q+A  +L  M K+G   N+
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
           V +  +I+G C    +  AM +  KM   G  P++ TY TLL G   A +   AEEL+  
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 406 MEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           M + G  P   T   +       GL  +A  V K    D+   PN
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQM-PDKGCTPN 286



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 117/225 (52%), Gaps = 7/225 (3%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +P ++TY TL+  L    R+     L+  + ++G  PD++ FN +I    + G + +A
Sbjct: 212 GCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDA 271

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +++F++M D GC P + TY+T+I G     K +++L+L   M   K   P D+ Y +L  
Sbjct: 272 IEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGH-KGFNP-DKIYQLLAE 329

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
                ++IEEA   V K+  SGI P  V YN +     + G+T  A  ++  M ++   P
Sbjct: 330 CLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMP 389

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           ++ T  I++ G   EG + +A   L ++   +     V+ NSLIK
Sbjct: 390 DDLTYVILIEGLAYEGYLNEARELLIKLCSRD-----VLVNSLIK 429


>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 479

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 213/428 (49%), Gaps = 20/428 (4%)

Query: 27  PTLITYTTLVAALTRQKR--FKSILSLISKVEK--DGMKPDSILFNAMINACSESGNVDE 82
           P  IT  +LV  L + ++   K+++   S  E+  +G + D   F AMI+          
Sbjct: 10  PKQIT-NSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRP 68

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A  + ++MK   C+ T   + T+ +GYG V +P +++++   M +D  VKP  ++Y  + 
Sbjct: 69  AEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKM-EDFQVKPTQKSYLTVF 127

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF-EMQNNQV 201
                +N ++ A     +M   GI P  V+ N L +A  +  ET  +   LF EM N   
Sbjct: 128 DILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGC 187

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           +P+  T G +++G CK G +  A   L  M+E  + P++V + SLI G      S+ +D+
Sbjct: 188 QPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQ---SNNLDE 244

Query: 262 ALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
           A+ L+EE    G++P+V T+S++MD    +G   +  E+ + MV+  + P++  +S L  
Sbjct: 245 AIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLIN 304

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           G  + G+ ++A  IL  MR  G+ P+  M+  +ISG C A   Q A +  ++M   GI+P
Sbjct: 305 GLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISP 364

Query: 379 N-------LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
           N       +K +  ++ G      P RA +L   M  +G+  +  T   +   +   G  
Sbjct: 365 NRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDL 424

Query: 432 REAKRVLK 439
            +A R+L+
Sbjct: 425 NKAARILE 432



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 187/403 (46%), Gaps = 44/403 (10%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +P +A  +F+ + +   +PT  +Y T+   L  +   K  +    ++ + G+ P  +  N
Sbjct: 100 RPLDAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLN 159

Query: 69  AMINA-CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            +I A C     V+ A ++F++M + GC+P + TY TLI G   +GK  ++ +LL  M +
Sbjct: 160 ILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEM-E 218

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +K + P+  +Y  L+   C  N+++EA  ++ +M+ +GI+P+  TY++L     + G + 
Sbjct: 219 EKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSS 278

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A ++L  M   ++ PN  T   +++G CKEG   +A+  L RM+ L+            
Sbjct: 279 QAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMR-LQ------------ 325

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
                                 G+KPD   +  I+    +A    +     D+M   GI 
Sbjct: 326 ----------------------GLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGIS 363

Query: 308 PD-------IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           P+       + + +++ +G     +P +A  +  SMR  G+   +  F  ++  +C    
Sbjct: 364 PNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGD 423

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           + +A  I E+M   G  P+   +  L+ G  + K+     ELL
Sbjct: 424 LNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELL 466



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 129/261 (49%), Gaps = 8/261 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  +A  + + + E+G  P++++YT+L+  L +       + L+ ++  +G+
Sbjct: 198 INGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGI 257

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+   ++++++   +SG+  +AM++ + M      P   TY+TLI G    GK  E+++
Sbjct: 258 EPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVE 317

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT-------Y 173
           +L  M + + +KP+   Y  ++   C+  + +EA N + +M   GI P+  +       +
Sbjct: 318 ILDRM-RLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMH 376

Query: 174 NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
           N + +      +  RA Q+   M+   +     T   +V  +CK G++  A R L  M  
Sbjct: 377 NMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMIL 436

Query: 234 LEVHPNLVVFNSLIKGFLDIK 254
               P+  ++N L+ G  D K
Sbjct: 437 DGCIPDEGMWNVLMCGLWDRK 457


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/469 (23%), Positives = 223/469 (47%), Gaps = 35/469 (7%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           V +G   EA  + + ++  G    L   T+L+     Q   +S L L++++ + G+ P+ 
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY--------------- 109
           + ++ +I+ C ++GN+++A + + +MK  G + +  + N++++GY               
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240

Query: 110 ------GNV-------------GKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
                  NV             GK  E+  L   +   K + PN  +YN ++   C K++
Sbjct: 241 ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIA-KGISPNVVSYNNIILGHCRKDN 299

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           I  A  V  +M+ +G  P+AVT+  L   Y + G+   A  +   M++  + P + T GI
Sbjct: 300 INAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGI 359

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           I+ G CK G   +      +       P  + +N++I GF+   + +        M E G
Sbjct: 360 IIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVG 419

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           + P  VT+++++D +     +    ++ +DM + G++ DI  +  L  G+ +  + + A 
Sbjct: 420 ITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAH 479

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +L  +R  G+ PN  ++ ++I+G+ N   ++ A+ +Y+KM   GI  +LKTY +L+ G 
Sbjct: 480 ELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGL 539

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            ++ +   A ++   M  KG+ P      ++ +     G    A+++L+
Sbjct: 540 LKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILE 588



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 202/390 (51%), Gaps = 9/390 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK +EA  +++ +I +G  P +++Y  ++    R+    +   +  ++  +G  P+
Sbjct: 259 LCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPN 318

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL- 122
           ++ F  +++   + G+++ A  IF +MKD+   PT +T   +IKG    G+  E   L  
Sbjct: 319 AVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFN 378

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           + +SQ     P    YN ++  +  + +I  A NV  +M   GI P  VTY +L   + +
Sbjct: 379 KFVSQ--GFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCK 436

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                 A ++L +M+   ++ + +  G ++ G+CK  +M+ A   L  ++   + PN  +
Sbjct: 437 GNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFI 496

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +NS+I GF   K+ + V++A+ L ++    G+  D+ T+++++D    +G +    +I  
Sbjct: 497 YNSMITGF---KNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHT 553

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M+  GI PD    ++L  G    G+ + A  IL  M    + P+V+++ T+I+G     
Sbjct: 554 EMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEG 613

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
            +Q A  ++++M + G+ P+  TY+ L+ G
Sbjct: 614 NLQEAFRLHDEMLDRGLVPDNITYDILVNG 643



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 100/413 (24%), Positives = 195/413 (47%), Gaps = 2/413 (0%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
             A  +FN  +E G    + T+ TL++ L ++ +     +L  +V   G+ P+ + +N +
Sbjct: 232 QNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNI 290

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           I       N++ A K++++M D+G  P   T+  L+ GY   G  E +  +   M +D N
Sbjct: 291 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRM-KDAN 349

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           + P D T  I+++  C      E  ++  K V+ G  P  + YNT+   + + G    A 
Sbjct: 350 ILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLAS 409

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            +  EM    + P+  T   ++ G+CK  N++ A++ L  MK   +  ++  + +LI GF
Sbjct: 410 NVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGF 469

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
              +D     + L  +   G+ P+   +++++  + +   + +  +++  MV  GI  D+
Sbjct: 470 CKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDL 529

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             ++ L  G +++G    A  I T M   G+ P+    T +I+G CN  + + A  I E 
Sbjct: 530 KTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILED 589

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           M    + P++  Y TL+ G+ +      A  L   M ++G+ P   T  ++ +
Sbjct: 590 MNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVN 642



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/399 (22%), Positives = 173/399 (43%), Gaps = 2/399 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P++     L+ A+ R+        L +K+   G+  D    + M+ AC + GN+ EA + 
Sbjct: 3   PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQH 62

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F + K  G +     Y+  +           +L LL+ M     + P + T+  ++ A  
Sbjct: 63  FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPP-EGTFTSVITACV 121

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            + ++ EA  +   MV  G   +     +L + Y   G    A  ++ E+  + + PN+ 
Sbjct: 122 KEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKV 181

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T  +++ G CK GN+E A  F   MK   +  ++   NS+++G+L  +            
Sbjct: 182 TYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDA 241

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            E G+  +V TF+T++      G M +   ++D+++  GI P++  ++ +  G+ R    
Sbjct: 242 LESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNI 300

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             A  +   M   G  PN V FT ++ G+     ++ A SI+ +M +  I P   T   +
Sbjct: 301 NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGII 360

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           + G  +A + +   +L      +G  P       + D +
Sbjct: 361 IKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGF 399



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 104/213 (48%), Gaps = 2/213 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           + N +  +G +  +  Y TL+    +++  KS   L++++   G+ P+  ++N+MI    
Sbjct: 446 LLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFK 505

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
              NV+EA+ +++KM + G      TY +LI G    G+   +  +   M   K + P+D
Sbjct: 506 NMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEM-LSKGILPDD 564

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           R + +L+   C+K   E A  ++  M    + P  + YNTL   + + G    A ++  E
Sbjct: 565 RAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDE 624

Query: 196 MQNNQVRPNERTCGIIVSGYCK-EGNMEDAMRF 227
           M +  + P+  T  I+V+G  K +GN    + F
Sbjct: 625 MLDRGLVPDNITYDILVNGKFKGDGNFSRDLTF 657


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 201/420 (47%), Gaps = 1/420 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+  G  +EA  ++  +I EG +P++ TY+ L+ AL R+   + I++L+ +++  G++P+
Sbjct: 210 LLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPN 269

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +   I A   +  +D+A  IF++M D GC P   TY  LI      GK +++ +L  
Sbjct: 270 IYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYV 329

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M    +  P+  TY  L+  +     +E       +M   G  PD VTY  L  A  + 
Sbjct: 330 KMRASSH-SPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKS 388

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+  RA  ML  M    + PN  T   ++ G  K   +++A+  L  M+ L V P    +
Sbjct: 389 GDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSY 448

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
              I  +    D          M++ G+ P +   +  +   +  G + + ++IF+D+ K
Sbjct: 449 VLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHK 508

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ PD   +++L K Y +AG+  KA  +L+ M   G  P+V++  ++I+    A ++  
Sbjct: 509 CGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDA 568

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  ++ ++  + + P + TY  LL G G+  +  +A EL   M E G  P   T   + D
Sbjct: 569 AWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLD 628



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 194/426 (45%), Gaps = 41/426 (9%)

Query: 3   ILVGKGKPHEAHYIFNCLIEE----GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           ++V  G+  +   I N L+EE    G RP + TYT  + AL R +R      +  +++ +
Sbjct: 241 LMVALGRRGDTRKIMN-LLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDE 299

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G  PD I +  +I+A   +G +D+A +++ KM+ S   P   TY TL+  +G VG  E  
Sbjct: 300 GCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETV 359

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
            +    M  D    P+  TY IL+ A C    ++ A++++  M   GI P+  TYNT+  
Sbjct: 360 KRFWNEMEVD-GYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMIC 418

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
              +      A ++L  M++  V+P   +  + +  Y K G+   A+     MK+  + P
Sbjct: 419 GLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMP 478

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           ++   N+ +    +       +     + + G+ PD VT++ +M  +S AG + K  ++ 
Sbjct: 479 SIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLL 538

Query: 299 DDMVKAGIEPDIHV-----------------------------------FSILAKGYVRA 323
            +M+  G EPD+ +                                   ++IL  G  + 
Sbjct: 539 SEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKE 598

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+  KA  +  SM + G  PN + F +++        +  A+ ++ +M  +  NP++ TY
Sbjct: 599 GKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTY 658

Query: 384 ETLLWG 389
            T+++G
Sbjct: 659 NTIIYG 664



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 123/505 (24%), Positives = 217/505 (42%), Gaps = 78/505 (15%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  EA  IFN L + G  P  +TY  L+   ++  +      L+S++   G +PD
Sbjct: 490 LAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPD 549

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            ++ N++IN   ++G VD A K+F ++K+    PT  TYN L+ G G  GK  ++L+L  
Sbjct: 550 VMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFG 609

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M++     PN  T+N L+      ++++ A  +  +M      PD +TYNT+     + 
Sbjct: 610 SMTE-SGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIRE 668

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA----MRFLYR--------- 230
           G    A     +M+   + P+  T   ++ G  + G +EDA    M F+++         
Sbjct: 669 GRIDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQF 727

Query: 231 --------MKELEVH-----PNLVVFNS----------LIKGFLDIK---DSDGVDKALT 264
                   + E E+        ++V NS          LIK     K   D+  V    T
Sbjct: 728 WGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFT 787

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
             +  G+ P + +++ +MD    +    K  E+F+DM  AG  P+   +++L   + ++ 
Sbjct: 788 --KNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSK 845

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVIS------------------------------- 353
              K   + + MR  G  PN +    +IS                               
Sbjct: 846 RINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYG 905

Query: 354 ----GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
               G   A + ++AM I+E+M + G  PN   Y  L+ G+G++ +   A EL + M ++
Sbjct: 906 PLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKE 965

Query: 410 GVRPKKSTIQLVADSWRAIGLAREA 434
           G+RP   +  ++ +     G   EA
Sbjct: 966 GIRPDLKSYTILVECLCITGRIDEA 990



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 173/352 (49%), Gaps = 2/352 (0%)

Query: 82   EAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
            +A  +F K  K+ G  PT  +YN L+ G       E++L+L + M +     PN+ TYN+
Sbjct: 778  DAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDM-KSAGTHPNNFTYNL 836

Query: 141  LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
            L+ A      I + +++  +M + G +P+A+T+N +  A  +     +A  + +E+ +  
Sbjct: 837  LLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGD 896

Query: 201  VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
              P   T G ++ G  K G  E AM+    M +    PN V++N LI GF    + D   
Sbjct: 897  FSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFAC 956

Query: 261  KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
            +    M + G++PD+ +++ +++     G + +  + F+++   G++PD   ++ +  G 
Sbjct: 957  ELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGL 1016

Query: 321  VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
             ++    +A S+ + M+  G+ P++  +  +I     A K+  A+ +YE++  +G+ P++
Sbjct: 1017 GKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSV 1076

Query: 381  KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
             TY  L+ G+  +    +A  + + M   G  P   T   + + +   GL  
Sbjct: 1077 FTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVH 1128



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 158/327 (48%), Gaps = 7/327 (2%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            M+ L+G     +A  +F  +   G  P   TY  L+ A  + KR   +  L S++   G 
Sbjct: 803  MDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGC 862

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            +P++I  N +I+A  +S N+++A+ ++ ++      PT  TY  LI G    G+ E+++K
Sbjct: 863  EPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMK 922

Query: 121  LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            + + M  D    PN   YNIL+  +     I+ A  +  KMV  GI+PD  +Y  L    
Sbjct: 923  IFEEM-LDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECL 981

Query: 181  AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
               G    A Q   E++   + P+  +   I++G  K   +++A+     MK   + P+L
Sbjct: 982  CITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDL 1041

Query: 241  VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
              +N+LI   L +  +  VD A+ + EE    G++P V T++ ++   S +G   +   +
Sbjct: 1042 YTYNALI---LHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSV 1098

Query: 298  FDDMVKAGIEPDIHVFSILAKGYVRAG 324
            F  M+  G  P+   F+ L   Y RAG
Sbjct: 1099 FKKMMVVGCSPNTETFAQLPNKYPRAG 1125



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/469 (22%), Positives = 195/469 (41%), Gaps = 45/469 (9%)

Query: 27   PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
            P ++TY T++  L R+ R         +++K  + PD +    +I      G V++A+K+
Sbjct: 653  PDVLTYNTIIYGLIREGRIDYAFWFFHQMKK-FLSPDYVTLCTLIPGVVRHGRVEDAIKV 711

Query: 87   FQKMKDSGCKPTTSTY-NTLIKGYGNVGKPEESLKLLQLM-----SQDKNV--------- 131
              +     C  T S +   L++      + EE++   +++      QD +V         
Sbjct: 712  VMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLC 771

Query: 132  ---------------------KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
                                  P   +YN L+      N  E+A  +   M ++G  P+ 
Sbjct: 772  KRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNN 831

Query: 171  VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
             TYN L  A+ +     +   +  EM++    PN  T  II+S   K  N+  A+   Y 
Sbjct: 832  FTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYE 891

Query: 231  MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
            +   +  P    +  LI G L    S+   K    M ++G  P+ V ++ +++ +  +G 
Sbjct: 892  LMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGE 951

Query: 291  MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
            +    E+F  MVK GI PD+  ++IL +     G   +A      ++  G+ P+ V +  
Sbjct: 952  IDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNF 1011

Query: 351  VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
            +I+G   + ++  A+S++ +M   GI+P+L TY  L+   G A +   A ++ + ++  G
Sbjct: 1012 IINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVG 1071

Query: 411  VRPKKSTIQLVADSWRAIGLAREAKRVLKSA--------EEDRQSMPNK 451
            + P   T   +       G   +A  V K           E    +PNK
Sbjct: 1072 LEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNK 1120



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 180/408 (44%), Gaps = 5/408 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   GK  +A  ++  +    H P  +TY TL+    +    +++    +++E DG 
Sbjct: 312 IDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGY 371

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + +  +I A  +SG+VD A  +   M   G  P   TYNT+I G     + +E+L+
Sbjct: 372 APDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALE 431

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M +   VKP   +Y + +  +       +A +    M   GI P     N      
Sbjct: 432 LLENM-ESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTL 490

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+ G    AE +  ++    + P+  T  +++  Y K G ++ A + L  M      P++
Sbjct: 491 AETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDV 550

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           ++ NSLI         D   K    ++   + P VVT++ ++      G + K  E+F  
Sbjct: 551 MIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGS 610

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M ++G  P+   F+ L     +      A  +   M     +P+V+ + T+I G     +
Sbjct: 611 MTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGR 670

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           +  A   + +M +  ++P+  T  TL+ G     +  R E+ ++V+ E
Sbjct: 671 IDYAFWFFHQMKKF-LSPDYVTLCTLIPG---VVRHGRVEDAIKVVME 714



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/311 (21%), Positives = 132/311 (42%), Gaps = 9/311 (2%)

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
           ++  P  +    +++SQ  N        N ++     +  IE+   V   M    I  + 
Sbjct: 107 SISDPNSAFSYFKIVSQLTNFVHTTDACNYMLEILREQRRIEDMVFVFDLMQKKVIYRNL 166

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT----CGIIVSGYCKEGNMEDAMR 226
            TY T+ +A +  G   RA   L +M       N  +      +++ G+C E     A++
Sbjct: 167 TTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLPGFCNE-----ALK 221

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
              RM    + P++  +++L+       D+  +   L  M+  G++P++ T++  + A  
Sbjct: 222 VYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALG 281

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
            A  +     IF +M   G  PD+  +++L      AG+  KA+ +   MR     P+ V
Sbjct: 282 RARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRV 341

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            + T++  +     ++     + +M   G  P++ TY  L+    ++    RA ++L VM
Sbjct: 342 TYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVM 401

Query: 407 EEKGVRPKKST 417
             KG+ P   T
Sbjct: 402 TTKGIFPNLHT 412



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 1/152 (0%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            G+  EA   F  L   G  P  ++Y  ++  L + +R    LSL S+++  G+ PD   +
Sbjct: 985  GRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTY 1044

Query: 68   NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            NA+I     +G VD A+K++++++  G +P+  TYN LI+G+   G  +++  + + M  
Sbjct: 1045 NALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKM-M 1103

Query: 128  DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVY 159
                 PN  T+  L   +     +   +  V+
Sbjct: 1104 VVGCSPNTETFAQLPNKYPRAGLVHNPFGAVF 1135



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 81/173 (46%), Gaps = 1/173 (0%)

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
           LM++  +  ++ T+ TI  A S  G +G+       M + G   + + ++ L    +  G
Sbjct: 156 LMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIH-LLLPG 214

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              +A  +   M   G+ P++  ++ ++         ++ M++ E+M  IG+ PN+ TY 
Sbjct: 215 FCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYT 274

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
             +   G A++   A  + + M+++G  P   T  ++ D+  A G   +AK +
Sbjct: 275 ICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKEL 327


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 192/403 (47%), Gaps = 7/403 (1%)

Query: 24   GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
            G  PTL+TY +L+  L ++   + I SL  ++ K G  P+  ++N++I+A     +  +A
Sbjct: 1043 GFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQA 1102

Query: 84   MKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
            M I ++M  SGC P   T+NTLI G    G+V K E  L+     +  + + PN  +Y  
Sbjct: 1103 MVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLR----EAIRRELNPNQLSYTP 1158

Query: 141  LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
            L+  +C +  +  A +++ +M+  G  PD VT+  L       G+   A  +  +M   Q
Sbjct: 1159 LIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 1218

Query: 201  VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
            V P+     +++SG CK+  +  A   L  M E  V P+  V+ +LI GF+  ++     
Sbjct: 1219 VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDAR 1278

Query: 261  KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
            K    ME  GV PD+V+ + ++  +   G+M +      +M K G  PD   ++ +  GY
Sbjct: 1279 KIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGY 1338

Query: 321  VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
             + G    A   L  M K    PNVV ++++I+G+C       A  ++  M    ++PN+
Sbjct: 1339 AKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNV 1398

Query: 381  KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
             TY  L+    +  +  RA    + M      P   T+  + +
Sbjct: 1399 VTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVN 1441



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 189/398 (47%), Gaps = 1/398 (0%)

Query: 27   PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
            P ++ Y  L+    R+      L L+ ++E +G  P  + + ++IN   + G++++   +
Sbjct: 1011 PHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSL 1070

Query: 87   FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            F +M+  G  P    YN++I    N     +++ +L+ M       P+  T+N L+   C
Sbjct: 1071 FLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFA-SGCDPDIITFNTLITGLC 1129

Query: 147  SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
             +  + +A + + + +   + P+ ++Y  L   +   GE   A  +L EM      P+  
Sbjct: 1130 HEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVV 1189

Query: 207  TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
            T G ++ G    G + +A+    +M E +V P++ ++N LI G    +        L  M
Sbjct: 1190 TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEM 1249

Query: 267  EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
             E  V+PD   ++T++D +  +  +G  ++IF+ M   G+ PDI   + + KGY + G  
Sbjct: 1250 LEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMM 1309

Query: 327  QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             +A   +++MRK G  P+   +TTVISG+     +  A+     M +    PN+ TY +L
Sbjct: 1310 SEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSL 1369

Query: 387  LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
            + GY +      AE L   M+ + + P   T  ++  S
Sbjct: 1370 INGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGS 1407



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 177/369 (47%), Gaps = 11/369 (2%)

Query: 32   YTT--LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
            Y+T  LV  L  ++R +  L LI      G  P  + +N +I+     G++   + +  +
Sbjct: 979  YSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGE 1038

Query: 90   MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
            M+ +G  PT  TY +LI   G  G  E+   L   M + +   PN + YN ++ A C+  
Sbjct: 1039 METNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRK-RGFSPNVQIYNSVIDALCNCR 1097

Query: 150  SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            S  +A  ++ +M ASG  PD +T+NTL       G   +AE  L E    ++ PN+ +  
Sbjct: 1098 SATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYT 1157

Query: 210  IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---M 266
             ++ G+C  G +  A   L  M      P++V F +LI G +    +  V +AL +   M
Sbjct: 1158 PLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVV---AGKVSEALIVREKM 1214

Query: 267  EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
             E  V PDV  ++ ++       ++   + I ++M++  ++PD  V++ L  G++R+   
Sbjct: 1215 TERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENL 1274

Query: 327  QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
              A  I   M   GV P++V    +I G+C    M  A+     M ++G  P+  TY T+
Sbjct: 1275 GDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTV 1334

Query: 387  LWGYGEAKQ 395
            + GY  AKQ
Sbjct: 1335 ISGY--AKQ 1341



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 190/400 (47%), Gaps = 2/400 (0%)

Query: 27   PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
            PT + ++TL+  L R +RF ++   +  +   G  P      A++ A +++G + +A ++
Sbjct: 870  PTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEM 929

Query: 87   FQKMKDS-GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
             +++++  G  P  +  N L+K      + +++ KL   M   K+   ++ +  +LVR  
Sbjct: 930  CERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEM-LGKDSGADNYSTCVLVRGL 988

Query: 146  CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
            C +  +EE   ++     +G  P  V YN L   Y + G+  R   +L EM+ N   P  
Sbjct: 989  CLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTL 1048

Query: 206  RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
             T G +++   K+G++E        M++    PN+ ++NS+I    + + +      L  
Sbjct: 1049 VTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQ 1108

Query: 266  MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
            M   G  PD++TF+T++      G + K +    + ++  + P+   ++ L  G+   GE
Sbjct: 1109 MFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGE 1168

Query: 326  PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
               A  +L  M   G  P+VV F  +I G   A K+  A+ + EKM E  + P++  Y  
Sbjct: 1169 LMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNV 1228

Query: 386  LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            L+ G  + +    A+ +L+ M EK V+P +     + D +
Sbjct: 1229 LISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGF 1268



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/407 (22%), Positives = 170/407 (41%), Gaps = 51/407 (12%)

Query: 4    LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            L  +G   +A +     I     P  ++YT L+     +        L+ ++   G  PD
Sbjct: 1128 LCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPD 1187

Query: 64   SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             + F A+I+    +G V EA+ + +KM +    P  + YN LI G         +  +L+
Sbjct: 1188 VVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILE 1247

Query: 124  LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
             M + KNV+P++  Y  L+  +    ++ +A  +   M   G+ PD V+ N + + Y Q+
Sbjct: 1248 EMLE-KNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQF 1306

Query: 184  GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            G    A   +  M+     P+E T   ++SGY K+GN+  A+R+L  M + +  PN+V +
Sbjct: 1307 GMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTY 1366

Query: 244  NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            +SLI G+    D+D  +     M+   + P+VVT++ ++ +      + +    F+ M+ 
Sbjct: 1367 SSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLL 1426

Query: 304  AGIEPDIHVFSILAKGYVRA--------------------------------GEPQKA-- 329
                P+      L  G                                    G+P+ +  
Sbjct: 1427 NHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAY 1486

Query: 330  ESILTS----------------MRKYGVHPNVVMFTTVISGWCNAVK 360
             +I+ S                M K G  PN + F +++ G+C+  K
Sbjct: 1487 NAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 1533



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 110/294 (37%), Gaps = 51/294 (17%)

Query: 13   AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
            A  I   ++E+  +P    Y TL+    R +       +   +E  G+ PD +  NAMI 
Sbjct: 1242 AKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIK 1301

Query: 73   ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
               + G + EA+     M+  GC P   TY T+I GY   G    +L+ L  M + K  K
Sbjct: 1302 GYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRK-CK 1360

Query: 133  PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
            PN  TY+ L+  +C     + A  +   M A  + P+ VTY  L  +  +  +  RA   
Sbjct: 1361 PNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLY 1420

Query: 193  LFEMQNNQVRPNERTCGIIVSGY------------------------------------- 215
               M  N   PN+ T   +V+G                                      
Sbjct: 1421 FETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGD 1480

Query: 216  -------------CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
                         C+   + +A+ F  RM +    PN + F SL+ GF  +  S
Sbjct: 1481 PRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKS 1534


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 185/387 (47%), Gaps = 2/387 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+   A  IF  +   G  P  + Y+ L+  L + ++    L ++++++K    PD+I +
Sbjct: 140 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 199

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I+   +SG+V+ A   F +M ++GCKP   TYN LI G+   G  + +   L   + 
Sbjct: 200 NVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETT 259

Query: 128 DKNVKPNDRTYNILVRAWCSKNS-IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
                 +  TY  +V  W +KN  IEEA  ++ K+ A+G  P   TYN L     + G  
Sbjct: 260 INGCTIDIHTYTAIVD-WLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRL 318

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A  +L ++ +N   P+  T   ++ G  KE    +A +    M    +  + V + +L
Sbjct: 319 EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTAL 378

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I+  L              M   G  PDVVT ST++D  S AG +G    IF  M   G+
Sbjct: 379 IRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGL 438

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+  V+S L  G  +A +   A  +L  M+K    P+ + +  +I G C +  ++ A +
Sbjct: 439 APNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARA 498

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEA 393
            +++M E G  P++ TY  L+ G+ +A
Sbjct: 499 FFDEMLEAGCKPDVYTYNILISGFCKA 525



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/461 (22%), Positives = 211/461 (45%), Gaps = 37/461 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EA  +   +++ G  P ++TYT+L+  L ++KR      L  ++   G+
Sbjct: 28  LNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGL 87

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D++ + A+I    ++G + +A  +++ M   GC P   T +T+I G    G+   +++
Sbjct: 88  ALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVR 147

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M + + + PN+  Y+ L+   C    ++ A  ++ +M  +   PD +TYN L    
Sbjct: 148 IFKSM-EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGL 206

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN-------------------- 220
            + G+   A     EM     +P+  T  I++SG+CK GN                    
Sbjct: 207 CKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTID 266

Query: 221 ----------------MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
                           +E+A+  + ++      P +  +N+L+ G   +   +     L 
Sbjct: 267 IHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 326

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            + + G  PDVVT+++++D         +  ++F +M   G+  D   ++ L +  ++ G
Sbjct: 327 KIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTG 386

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           +  +A S+  +M  +G  P+VV  +T+I G   A ++  A+ I++ M   G+ PN   Y 
Sbjct: 387 KIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYS 446

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            L+ G  +A++   A E+L  M++    P   T  ++ D  
Sbjct: 447 ALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGL 487



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 201/445 (45%), Gaps = 2/445 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+  GK  +A  ++  +   G  P ++T +T++  L++  R  + + +   +E  G+ P+
Sbjct: 101 LLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN 160

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            ++++A+I+   ++  +D A+++  +MK + C P T TYN LI G    G  E +     
Sbjct: 161 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFD 220

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEA-WNVVYKMVASGIQPDAVTYNTLARAYAQ 182
            M +    KP+  TYNIL+  +C   + + A  ++  +   +G   D  TY  +    A+
Sbjct: 221 EMLE-AGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAK 279

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
             +   A  ++ ++  N   P   T   +++G CK G +E+A+  L ++ +    P++V 
Sbjct: 280 NKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVT 339

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           + SLI G    K S    K    M   G+  D V ++ ++      G + +   ++  M 
Sbjct: 340 YTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMT 399

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G  PD+   S +  G  +AG    A  I  SM   G+ PN V+++ +I G C A KM 
Sbjct: 400 SHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 459

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A+ +  +M +    P+  TY  L+ G  ++     A      M E G +P   T  ++ 
Sbjct: 460 CALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILI 519

Query: 423 DSWRAIGLAREAKRVLKSAEEDRQS 447
             +   G    A  V       R S
Sbjct: 520 SGFCKAGNTDAACGVFDDMSSSRCS 544



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 180/369 (48%), Gaps = 2/369 (0%)

Query: 44  RFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYN 103
           + +  ++L+ K+  +G  P    +NA++N   + G ++EA+ + +K+ D+GC P   TY 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 104 TLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVA 163
           +LI G G   +  E+ KL + M+  + +  +   Y  L+R       I +A +V   M +
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMAL-RGLALDTVCYTALIRELLQTGKIPQASSVYKTMTS 119

Query: 164 SGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED 223
            G  PD VT +T+    ++ G    A ++   M+   + PNE     ++ G CK   M+ 
Sbjct: 120 HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 179

Query: 224 AMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD 283
           A+  L +MK+    P+ + +N LI G     D +        M E G KPDV T++ ++ 
Sbjct: 180 ALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 239

Query: 284 AWSSAG-LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
            +  AG        +  +    G   DIH ++ +     +  + ++A +++  +   G  
Sbjct: 240 GFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCT 299

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           P +  +  +++G C   +++ A+ +  K+ + G  P++ TY +L+ G G+ K+ + A +L
Sbjct: 300 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 359

Query: 403 LQVMEEKGV 411
            + M  +G+
Sbjct: 360 FKEMALRGL 368


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 200/414 (48%), Gaps = 7/414 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +P +  YT  +  L R  + +    +   ++K G+ P+   ++AMI+   ++GNV +A
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
             +++++  +   P    + TL+ G+    +   +  L   M +   V PN   YN L+ 
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVK-FGVDPNLYVYNCLIH 347

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C   ++ EA  ++ +M +  + PD  TY  L        +   A ++  +M+N ++ P
Sbjct: 348 GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP 407

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   ++ GYCKE NME A+     M    V PN++ F++LI G+ +++D   +  A+
Sbjct: 408 SSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRD---IKAAM 464

Query: 264 TLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
            L  E    G+ PDVVT++ ++DA      M +   ++ DM++AGI P+ H F+ L  G+
Sbjct: 465 GLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGF 524

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            + G    A        +     N V FT +I G C    + RA   +  M   GI P++
Sbjct: 525 WKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDI 584

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
            +Y ++L G+ + K+      L   M + G+ P     QL+A  ++A G  + A
Sbjct: 585 CSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 171/358 (47%), Gaps = 3/358 (0%)

Query: 34  TLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS 93
           +++  L R++RF S+      +   G+ PD  ++  +   C + G   +  K+  +M   
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSL 228

Query: 94  GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
           G KP    Y   I       K EE+ K+ +LM +   V PN  TY+ ++  +C   ++ +
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKK-HGVLPNLYTYSAMIDGYCKTGNVRQ 287

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A+ +  +++ + + P+ V + TL   + +  E   A  +   M    V PN      ++ 
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH 347

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG-VDKALTLMEEFGVK 272
           G+CK GNM +A+  L  M+ L + P++  +  LI G L I+D     ++    M+   + 
Sbjct: 348 GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILING-LCIEDQVAEANRLFQKMKNERIF 406

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           P   T+++++  +     M +  ++  +M  +G+EP+I  FS L  GY    + + A  +
Sbjct: 407 PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGL 466

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
              M   G+ P+VV +T +I        M+ A+ +Y  M E GI+PN  T+  L+ G+
Sbjct: 467 YFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGF 524



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 180/415 (43%), Gaps = 7/415 (1%)

Query: 13  AHYIFNCLIEEGHRP--TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           +H +FN L E+   P  ++  ++ L+        F+  L +  +++     PDS    ++
Sbjct: 115 SHRLFNAL-EDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSI 170

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           +N        D     +Q M   G  P    Y  L +     G   +  KLL  M+    
Sbjct: 171 LNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTS-LG 229

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           +KPN   Y I +   C  N +EEA  +   M   G+ P+  TY+ +   Y + G   +A 
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY 289

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            +  E+   ++ PN    G +V G+CK   +  A      M +  V PNL V+N LI G 
Sbjct: 290 GLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGH 349

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
               +       L+ ME   + PDV T++ +++       + +   +F  M    I P  
Sbjct: 350 CKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSS 409

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             ++ L  GY +    ++A  + + M   GV PN++ F+T+I G+CN   ++ AM +Y +
Sbjct: 410 ATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFE 469

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           M   GI P++ TY  L+  + +      A  L   M E G+ P   T   + D +
Sbjct: 470 MTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGF 524



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 152/325 (46%), Gaps = 1/325 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F  +++ G  P L  Y  L+    +       + L+S++E   + PD   +  +IN
Sbjct: 323 ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
                  V EA ++FQKMK+    P+++TYN+LI GY      E++L L   M+    V+
Sbjct: 383 GLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTAS-GVE 441

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           PN  T++ L+  +C+   I+ A  + ++M   GI PD VTY  L  A+ +      A ++
Sbjct: 442 PNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRL 501

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             +M    + PN+ T   +V G+ KEG +  A+ F     +     N V F  LI+G   
Sbjct: 502 YSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQ 561

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
                   +  + M   G+ PD+ ++ +++        +     +  DM+K GI P++ V
Sbjct: 562 NGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLV 621

Query: 313 FSILAKGYVRAGEPQKAESILTSMR 337
             +LA+ Y   G  + A  +  S R
Sbjct: 622 NQLLARFYQANGYVKSACFLTNSSR 646



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 169/372 (45%), Gaps = 4/372 (1%)

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
           +F+ +I    E G  +EA+ + ++MK   C P +    +++ G     + +      QLM
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDYQLM 190

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
              + + P+   Y +L +    +    +   ++ +M + GI+P+   Y        +  +
Sbjct: 191 IS-RGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              AE+M   M+ + V PN  T   ++ GYCK GN+  A      +   E+ PN+VVF +
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           L+ GF   ++          M +FGV P++  ++ ++     +G M +   +  +M    
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + PD+  ++IL  G     +  +A  +   M+   + P+   + ++I G+C    M++A+
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            +  +M   G+ PN+ T+ TL+ GY   +    A  L   M  KG+ P   T   + D+ 
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489

Query: 426 RAIGLAREAKRV 437
                 +EA R+
Sbjct: 490 FKEANMKEALRL 501



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 158/354 (44%), Gaps = 28/354 (7%)

Query: 116 EESLKLLQLMSQDKNVKPND-RTYNILVR----------AWCSKNSI-------EEAWNV 157
           EE+ KL +  S+ +  K ND ++++ ++           A C   S+        E  N+
Sbjct: 55  EEAFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNM 114

Query: 158 VYKMVAS--GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
            +++  +   IQ    +    +    ++ E    E+ L+  +  +  P+ + C  I++G 
Sbjct: 115 SHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCSPDSKACLSILNGL 174

Query: 216 CKEGNME----DAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
            +    +    D    + R    +VH   V+F    K  L  K     +K L  M   G+
Sbjct: 175 VRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKK----EKLLDEMTSLGI 230

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           KP+V  ++  +        M + +++F+ M K G+ P+++ +S +  GY + G  ++A  
Sbjct: 231 KPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYG 290

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +   +    + PNVV+F T++ G+C A ++  A S++  M + G++PNL  Y  L+ G+ 
Sbjct: 291 LYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHC 350

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
           ++     A  LL  ME   + P   T  ++ +         EA R+ +  + +R
Sbjct: 351 KSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER 404


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 191/390 (48%), Gaps = 6/390 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           GH   L TY  ++  L R  RF   LS++ K+ K G +PD +  +++IN   +   V  A
Sbjct: 101 GH--DLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGA 158

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +  KM++  CK     YNT+I G+   G    +L L   M +D  V+ +  TYN LV 
Sbjct: 159 VDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERD-GVRADTVTYNSLVT 217

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C      +A  ++  MV   I P+ +T+  L  A+ + G+   A++   EM    + P
Sbjct: 218 GLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDP 277

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   ++ G C  G +++A + L  M      P++V +N+LI GF   K  D   K +
Sbjct: 278 DVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLV 337

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M + G+  D VTF+TI+  +  AG     QEIF  M   G  P+I  +SIL  G    
Sbjct: 338 REMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYN 394

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
              +KA  +  SM+K  +  ++  +  VI G C    ++ A  ++  +   G+ P++ TY
Sbjct: 395 WRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTY 454

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            T++ G+   +   +A+ L + M+E G+ P
Sbjct: 455 TTMISGFCRKRLWDKADFLYRKMQEDGLLP 484



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 100/436 (22%), Positives = 206/436 (47%), Gaps = 10/436 (2%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +F  +I+    P+++ ++ L++ + + K +  ++SL   +E  G+  D   +N +I
Sbjct: 52  EAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVI 111

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N          A+ +  KM   G +P   T ++LI G+    +   ++ L+  M ++   
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKM-EEMRC 170

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           K +   YN ++  +C    +  A  +  +M   G++ D VTYN+L       G    A +
Sbjct: 171 KLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAAR 230

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           ++ +M    + PN  T   +++ + +EG   +A +F   M    + P++  +NS+I G  
Sbjct: 231 LMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLC 290

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                D   + L LM   G  PDVVT++T+++ +     + +  ++  +M + G+  D  
Sbjct: 291 MHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTV 350

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            F+ + +GY +AG P  A+ I + M   G  PN+  ++ ++ G C   ++++A+ ++E M
Sbjct: 351 TFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESM 407

Query: 372 CEIGINPNLKTYETLLWGY---GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            +  +  ++ TY  ++ G    G  +  W   +L   +  KG+ P   T   +   +   
Sbjct: 408 QKSEMELDITTYNIVIHGMCMIGNVEDAW---DLFCSLSFKGLEPDVVTYTTMISGFCRK 464

Query: 429 GLAREAKRVLKSAEED 444
            L  +A  + +  +ED
Sbjct: 465 RLWDKADFLYRKMQED 480



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 145/301 (48%), Gaps = 4/301 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G  + A  +F  +  +G R   +TY +LV  L    R      L+  +    + P+ I F
Sbjct: 188 GLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITF 247

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            A+INA    G   EA K +++M      P   TYN++I G    G+ +E+ ++L LM  
Sbjct: 248 TALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVT 307

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K   P+  TYN L+  +C    ++E   +V +M   G+  D VT+NT+ + Y Q G   
Sbjct: 308 -KGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPD 366

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A+++   M +   RPN RT  I++ G C    +E A+     M++ E+  ++  +N +I
Sbjct: 367 AAQEIFSRMGS---RPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVI 423

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G   I + +        +   G++PDVVT++T++  +    L  K   ++  M + G+ 
Sbjct: 424 HGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLL 483

Query: 308 P 308
           P
Sbjct: 484 P 484



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 113/239 (47%), Gaps = 6/239 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N  V +GK  EA   +  +I     P + TY +++  L    +      ++  +   G 
Sbjct: 251 INAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGC 310

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + +N +IN   ++  VDE  K+ ++M   G    T T+NT+I+GY   G+P+ + +
Sbjct: 311 FPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQE 370

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M      +PN RTY+IL+   C    +E+A  +   M  S ++ D  TYN +    
Sbjct: 371 IFSRMGS----RPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGM 426

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR-MKELEVHP 238
              G    A  +   +    + P+  T   ++SG+C++  + D   FLYR M+E  + P
Sbjct: 427 CMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRK-RLWDKADFLYRKMQEDGLLP 484



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 99/217 (45%)

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
           N+++A+     M +    P++V F+ L+      K+ D V      ME  G+  D+ T++
Sbjct: 49  NLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYN 108

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
            +++             +   M+K G EPD+   S L  G+ +      A  +++ M + 
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEM 168

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
               +VV++ T+I G+C    +  A+ ++ +M   G+  +  TY +L+ G   + +   A
Sbjct: 169 RCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDA 228

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
             L++ M  + + P   T   + +++   G   EAK+
Sbjct: 229 ARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKK 265


>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
 gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
          Length = 384

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 188/382 (49%), Gaps = 8/382 (2%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQK-RFKSILSLISKVEKDGMKPDSILFNAMINAC 74
           +F  ++++G   T++TYT ++    RQK +    L L+  +++ G KPD IL+N ++N  
Sbjct: 4   LFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGL 63

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
             SG ++ A KI   MK         TY  LIK Y N G+ ++  KL Q M +DK   PN
Sbjct: 64  VNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEM-KDKGESPN 122

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
             TYN L++ +  K   +EA  +  +M   G   D  TYN     Y + G     E++L 
Sbjct: 123 SWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLD 182

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           EM    V P++ T   ++  Y K+     A   L  M E    PN+  +N ++      +
Sbjct: 183 EMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLS---SAR 239

Query: 255 DSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
               V +A  L E     GV P++VT+S ++  +   GL  +  +++D+M++AG  P I 
Sbjct: 240 KEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCII 299

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            +S L + Y   G  Q+A +    MRK G+ P+  ++T ++  +  A + + A  +Y +M
Sbjct: 300 AYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEM 359

Query: 372 CEIGINPNLKTYETLLWGYGEA 393
            + G  P+  TY  L+  +  A
Sbjct: 360 TKEGFVPDGITYGILVRAFANA 381



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 166/354 (46%), Gaps = 2/354 (0%)

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGY-GNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           A  +F +M   GC+ T  TY  +I GY     K + +L+LL++M ++   KP++  YN L
Sbjct: 1   ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVM-KESGKKPDEILYNCL 59

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           V    +   +E A  ++  M    +  + VTY  L + YA  G      ++  EM++   
Sbjct: 60  VNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGE 119

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            PN  T   ++ GY ++G  ++A+     M  +    ++  +N  I  +      + +++
Sbjct: 120 SPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMER 179

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            L  M+  GV PD VT++T++D ++      K  EI  +M +AG  P+I  ++I+     
Sbjct: 180 LLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSAR 239

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           +     +A  +  +++  GV PN+V ++ ++S +        A  ++++M E G  P + 
Sbjct: 240 KEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCII 299

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
            Y  L+  YG       A    Q M + G+ P       + D++   G  REA+
Sbjct: 300 AYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAE 353



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 149/324 (45%), Gaps = 1/324 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N LV  G+   A  I + + ++     L+TYT L+       R +    L  +++  G 
Sbjct: 60  VNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGE 119

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+S  +NA+I      G   EA++++ +M   GC     TYN  I  YG  G  E+  +
Sbjct: 120 SPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMER 179

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M   K V P+  TYN L+  +  K+   +A  ++ +M  +G +P+  TYN +  + 
Sbjct: 180 LLDEMDT-KGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSA 238

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A Q+   +++  V PN  T   ++S Y + G   +A +    M E    P +
Sbjct: 239 RKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCI 298

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + ++ LI+ +               M + G+ PD   ++ +MDA+  AG   + + ++ +
Sbjct: 299 IAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFE 358

Query: 301 MVKAGIEPDIHVFSILAKGYVRAG 324
           M K G  PD   + IL + +  AG
Sbjct: 359 MTKEGFVPDGITYGILVRAFANAG 382



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 134/285 (47%), Gaps = 1/285 (0%)

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYA-QYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           A ++ Y+M+  G +   VTY  +   Y  Q  +   A ++L  M+ +  +P+E     +V
Sbjct: 1   ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLV 60

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           +G    G +E A + L  MK+ +V  NLV + +LIK + +        K    M++ G  
Sbjct: 61  NGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGES 120

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           P+  T++ ++  +   GL  +  E++D+M   G   D+H ++I    Y + G  +  E +
Sbjct: 121 PNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERL 180

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           L  M   GV P+ V + T++  +       +A  I  +M E G  PN+ TY  +L    +
Sbjct: 181 LDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARK 240

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
            +    A +L + ++ KGV P   T   +   +   GL  EA ++
Sbjct: 241 EQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKL 285



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 135/276 (48%), Gaps = 2/276 (0%)

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKE-GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           + + M  +       T  +I+ GY ++   ++ A+R L  MKE    P+ +++N L+ G 
Sbjct: 4   LFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGL 63

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
           ++    +  +K L  M++  V  ++VT++ ++  +++AG +  C+++F +M   G  P+ 
Sbjct: 64  VNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNS 123

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             ++ L +GY R G  ++A  +   M   G   +V  +   I+ +     ++    + ++
Sbjct: 124 WTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDE 183

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M   G+ P+  TY TLL  Y +     +A E+L+ M E G RP   T  ++  S R    
Sbjct: 184 MDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQS 243

Query: 431 AREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNL 466
             EA ++ ++  + +  +PN     A+ S++ +  L
Sbjct: 244 VAEATQLFENL-KSKGVVPNIVTYSAMLSLYGRHGL 278


>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 412

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 194/390 (49%), Gaps = 22/390 (5%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G+ P ++TY TL+  L R  R    +S+ + +  DG+               + G+
Sbjct: 36  ILRRGYIPDIVTYNTLIKGLCRVHR----ISVATCIIIDGL--------------CKVGH 77

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
            DEA +IF++MK  G  P   +Y++L+ G+   GK EES +L   M  D+ V+PN   +N
Sbjct: 78  EDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMV-DQGVQPNLVQFN 136

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           +L+   C +  + EA  ++   +  GI  D VTYN+L   + + G+   A ++   M + 
Sbjct: 137 VLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSK 196

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
               NE +  I+++GYCK   +E+AM     M ++   PN+  +++L+ G L        
Sbjct: 197 GCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDA 256

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
           +K   +M+  G+  D   +   +D     G++ +  E+F+++     + D   +S L  G
Sbjct: 257 NKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDG 316

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI---GI 376
             +AG+ + A      + + G+ PNVV    +I G+C   ++ +A  ++EKM ++   G 
Sbjct: 317 LCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGC 376

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            P++ TY TLL G+ E+ +      LL  M
Sbjct: 377 TPDIITYNTLLRGFCESNKLEEVVNLLHKM 406



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 146/304 (48%), Gaps = 18/304 (5%)

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           + P+  T NIL    C+ N + E    +  ++  G  PD VTYNTL +   +        
Sbjct: 6   LSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVH------ 59

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
                      R +  TC II+ G CK G+ ++A      MK   + PN++ ++SL+ GF
Sbjct: 60  -----------RISVATC-IIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGF 107

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
                 +   +    M + GV+P++V F+ ++D     G + + +++ +  ++ GI  D+
Sbjct: 108 CCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDL 167

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             ++ L  G+ + G+   A  +  SM   G   N + +T +I+G+C   K++ AM++Y +
Sbjct: 168 VTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNE 227

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M ++G  PN+KTY TLL G  +  +   A +L  VM+  G+        +  D     G+
Sbjct: 228 MPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGV 287

Query: 431 AREA 434
             EA
Sbjct: 288 LFEA 291



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 148/302 (49%), Gaps = 10/302 (3%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  E+  +FN ++++G +P L+ +  L+  L ++ +      L+    + G+  D + +
Sbjct: 111 GKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTY 170

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N++I+   + G++  A K+F  M   GC+    +Y  LI GY  + K EE++ L   M Q
Sbjct: 171 NSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQ 230

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
               +PN +TY+ L+        + +A  +   M ASGI  D+  Y        + G  +
Sbjct: 231 VGK-RPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLF 289

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++  E+++   + +  +   ++ G CK G +E A  F  ++ +  + PN+V  N +I
Sbjct: 290 EAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMI 349

Query: 248 KGFLDIKDSDGVDKALTL------MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            GF  ++    VDKA  L      MEE G  PD++T++T++  +  +  + +   +   M
Sbjct: 350 HGFCRVEQ---VDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 406

Query: 302 VK 303
            K
Sbjct: 407 FK 408



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 93/393 (23%), Positives = 168/393 (42%), Gaps = 57/393 (14%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+ PD    N + N       V E +     +   G  P   TYNTLIKG   V +   +
Sbjct: 5   GLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVA 64

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
                                I++   C     +EA  +  +M A G+ P+ ++Y++L  
Sbjct: 65  -------------------TCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVH 105

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            +   G+   ++++  EM +  V+PN     +++   CKEG + +A + L    +  +  
Sbjct: 106 GFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIIL 165

Query: 239 NLVVFNSLIKGFLDIKD------------SDG--------------------VDKALTL- 265
           +LV +NSLI GF  I D            S G                    V++A+ L 
Sbjct: 166 DLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLY 225

Query: 266 --MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M + G +P+V T+ST++      G +G   ++F  M  +GI  D  ++ I   G  + 
Sbjct: 226 NEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKN 285

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G   +A  +   ++ Y    +   ++ +I G C A K++ A   ++++ + G+ PN+ T 
Sbjct: 286 GVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTC 345

Query: 384 ETLLWGYGEAKQPWRAE---ELLQVMEEKGVRP 413
             ++ G+   +Q  +A    E ++ MEE G  P
Sbjct: 346 NIMIHGFCRVEQVDKANILFEKMEKMEENGCTP 378



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 157/338 (46%), Gaps = 4/338 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA  IF  +  +G  P +I+Y++LV       + +    L +++   G++P+ + F
Sbjct: 76  GHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQF 135

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I+   + G V EA K+ +     G      TYN+LI G+  +G    + KL   M  
Sbjct: 136 NVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPS 195

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K  + N+ +Y IL+  +C    +EEA N+  +M   G +P+  TY+TL     Q G+  
Sbjct: 196 -KGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVG 254

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++   M+ + +  +     I + G CK G + +AM     +K      +   ++ LI
Sbjct: 255 DANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLI 314

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA--- 304
            G       +   +    + + G++P+VVT + ++  +     + K   +F+ M K    
Sbjct: 315 DGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEEN 374

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
           G  PDI  ++ L +G+  + + ++  ++L  M K   H
Sbjct: 375 GCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKRMRH 412



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 87/199 (43%), Gaps = 18/199 (9%)

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM-- 361
           AG+ PD+   +ILA          +  + +T + + G  P++V + T+I G C   ++  
Sbjct: 4   AGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISV 63

Query: 362 ---------------QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
                            A  I+E+M   G+ PN+ +Y +L+ G+  A +   ++ L   M
Sbjct: 64  ATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEM 123

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNL 466
            ++GV+P      ++ D     G   EAK++L+   +    +        ++   +  +L
Sbjct: 124 VDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDL 183

Query: 467 SASNSTFLQIPGVVSSEHN 485
           S++   FL +P     EHN
Sbjct: 184 SSARKLFLSMPS-KGCEHN 201


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/439 (24%), Positives = 213/439 (48%), Gaps = 20/439 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  +A+ +F+ ++ +G  P ++TY +++  L + +        + K E    
Sbjct: 146 INGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQA-------MDKAE---- 194

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
                   A++    + G ++EA+++ +KM   G +P   TY+ LI  Y  +G+  E+  
Sbjct: 195 --------AVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARN 246

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M + +   P+  TY  L+  + +K ++ +  +++  M+  GI  +   +N L RAY
Sbjct: 247 IFDSMVR-RGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAY 305

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+     +A     EM+     PN  T   ++   CK G +EDA+    +M    + P++
Sbjct: 306 AKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDI 365

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + F SLI G   I +   V+K    M   G+ P+ +  +TIMD+    G + +  + FD 
Sbjct: 366 ITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQ 425

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           ++  G++PD+  ++IL  GY   G+  ++  +L  M   G+ P+ V ++ +++G+C   +
Sbjct: 426 IIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGR 485

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A+++Y +M    + PN  TY  +L G   A +   A E    + + G++   +T  +
Sbjct: 486 VDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNI 545

Query: 421 VADSWRAIGLAREAKRVLK 439
           V           EA R+ +
Sbjct: 546 VLGGLCENSFVDEALRMFQ 564



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/444 (23%), Positives = 207/444 (46%), Gaps = 7/444 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  IF+ ++  G  P   TY TL+     +     +  L++ + +DG+  +  +F
Sbjct: 239 GRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVF 298

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I A +++  +D+AM  F +M+  G  P   TY T+I      G+ E+++     M  
Sbjct: 299 NILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVS 358

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  + P+  T+  L+   C+    ++   + ++M+  GI P+A+  NT+  +  + G   
Sbjct: 359 E-GLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVL 417

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A     ++ +  V+P+  +  I++ GYC +G M+++++ L RM  + + P+ V +++L+
Sbjct: 418 EAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALL 477

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            G+     +  VD AL L  E     VKP+ +T++ I+     AG +   +E +  +V +
Sbjct: 478 NGYCK---NGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDS 534

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           GI+  I+ ++I+  G        +A  +   +R       V  F  +I G     ++  A
Sbjct: 535 GIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDA 594

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
            S++  +   G+ P+   Y  ++  + E      ++EL   ME+ G      T+  +   
Sbjct: 595 KSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRK 654

Query: 425 WRAIGLAREAKRVLKSAEEDRQSM 448
               G  R A   L   +E   S+
Sbjct: 655 LLEKGDVRRAGTYLTKIDEKEYSV 678



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/356 (23%), Positives = 177/356 (49%), Gaps = 4/356 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++IL   G+  +A   F+ ++ EG  P +IT+T+L+  L     +K +  L  ++   G+
Sbjct: 337 IDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGI 396

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P++I  N ++++  + G V EA   F ++   G KP   +Y  LI GY   GK +ES+K
Sbjct: 397 HPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIK 456

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M     ++P++ TY+ L+  +C    +++A  +  +M +  ++P+A+TYN +    
Sbjct: 457 LLGRMVS-IGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGL 515

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A +   ++ ++ ++    T  I++ G C+   +++A+R    ++  E    +
Sbjct: 516 FHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEV 575

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FN +I G L +          + +   G+ PD + +  ++ +    GL+ +  E+F  
Sbjct: 576 RTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLS 635

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM--RKYGVHPNV-VMFTTVIS 353
           M K G   +    + + +  +  G+ ++A + LT +  ++Y V  +  V+  +++S
Sbjct: 636 MEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEASTAVLLISIVS 691



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 172/364 (47%), Gaps = 31/364 (8%)

Query: 83  AMKIFQKMKDSGCKPTTS---TYNTLIKGYGNVGKPEESLK--------LLQLMSQDK-N 130
           A+ +F  M   G     +   T+  LI+ + NVG  + +L+         + +M+ D  N
Sbjct: 75  AVSLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYN 134

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
             PN  +YN+++     +  +++A+ + ++M+  G  P+ VTYN++     +     +AE
Sbjct: 135 CPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAE 194

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            +L +M +                   +G +E+A+R L +M    + P++V ++ LI  +
Sbjct: 195 AVLQQMFD-------------------KGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYY 235

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
             I            M   G  PD  T+ T++  +++ G +    ++   M++ GI  + 
Sbjct: 236 CKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLED 295

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
           HVF+IL + Y +     KA +    MR+ G  PNVV +TTVI   C A +++ A+S + +
Sbjct: 296 HVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQ 355

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M   G++P++ T+ +L+ G     +  + E+L   M  +G+ P    +  + DS    G 
Sbjct: 356 MVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGR 415

Query: 431 AREA 434
             EA
Sbjct: 416 VLEA 419



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 29/173 (16%)

Query: 297 IFDDMVKAGIE---PDIHVFSILAKGYVRAG--------EPQKAESILTSMRK--YGVHP 343
           +F+ M + G+     D   F IL + +   G        E + + + +  M    Y   P
Sbjct: 78  LFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPP 137

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           NV+ +  VI+G     ++ +A +++ +M   G  PN+ TY +++ G  +A+   +AE +L
Sbjct: 138 NVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVL 197

Query: 404 QVMEEK----------------GVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
           Q M +K                G++P   T  L+ D +  IG   EA+ +  S
Sbjct: 198 QQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDS 250


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/467 (23%), Positives = 219/467 (46%), Gaps = 7/467 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L   GK   A  + + + + G  P +IT   +V  L + +R     S+   ++    
Sbjct: 416 IDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTC 475

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD++ + ++I      G VDEA K++++M D+   P    Y +LI+ +   G+ E+  K
Sbjct: 476 RPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHK 535

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M +     P+    N  +        IE+   +  ++   G  PDA +Y  L    
Sbjct: 536 IYNEMLR-LGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGL 594

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G  + A ++ + M+      + R    ++ G+CK G +  A + L  MK     P +
Sbjct: 595 VKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTV 654

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V + S+I G   I   D +D+A  L EE    G++ +VV +S+++D +   G + +   I
Sbjct: 655 VTYGSVIDGLAKI---DRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLI 711

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            +++++ G+ P+++ ++ L    V+A E  +A     SM+     PN + ++ +I G C 
Sbjct: 712 MEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCK 771

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             K  +A   +++M + G  PN+ TY T++ G  +A     A+ L +  +EKG     + 
Sbjct: 772 IRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAI 831

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQ 464
              + +       A +A R+ + A     S+  K   + ++S+H+ +
Sbjct: 832 YNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAE 878



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/424 (22%), Positives = 206/424 (48%), Gaps = 2/424 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  + E G+   +  +TTL+    R+ R  + LSL+ +++ + ++PD +L+N  I+   
Sbjct: 222 LFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFG 281

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           ++G VD A K F +MK +G      TY ++I       +  E+++L + M Q+K V P  
Sbjct: 282 KAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQV-PCA 340

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
             YN ++  +      E+A++++ +    G  P  V+YN +     + G+   A +   E
Sbjct: 341 YAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEE 400

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M+ + + PN  T  I++   CK G +E A+     MK+  + PN++  N ++      + 
Sbjct: 401 MKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQR 459

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D        ++    +PD VT+ ++++     G + +  ++++ M+ A   P+  V++ 
Sbjct: 460 LDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTS 519

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L + + + G  +    I   M + G  P++++  T +     A ++++  ++++++  +G
Sbjct: 520 LIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG 579

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
             P+ ++Y  L+ G  +A     A EL   M+E+G          V D +   G   +A 
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAY 639

Query: 436 RVLK 439
           ++L+
Sbjct: 640 QLLE 643



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/406 (22%), Positives = 179/406 (44%), Gaps = 13/406 (3%)

Query: 17  FNCL---IEE----GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNA 69
           FNCL   +EE    G  P+  T   +V +  + ++ +   + I  + K   +P    +  
Sbjct: 146 FNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTN 205

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK 129
           +I A S S + D  + +FQ+M++ G       + TLI+ +   G+ + +L LL  M  + 
Sbjct: 206 LIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSN- 264

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
           +++P+   YN+ +  +     ++ AW   ++M A+G+  D VTY ++     +      A
Sbjct: 265 SLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEA 324

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
            ++   M  N+  P       ++ GY   G  EDA   L R +     P++V +N ++  
Sbjct: 325 VELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSC 384

Query: 250 FLDIKDSDGVDKALTLMEEF--GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
              +     VD+AL   EE      P++ T++ ++D    AG +     + D M  AG+ 
Sbjct: 385 ---LGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLF 441

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P++   +I+     +A     A SI   +      P+ V + ++I G     ++  A  +
Sbjct: 442 PNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKL 501

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           YE+M +    PN   Y +L+  + +  +     ++   M   G  P
Sbjct: 502 YEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSP 547



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 127/279 (45%), Gaps = 2/279 (0%)

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
            YN+L    A+  +    EQ+L EM      P+  TC  IV  + K   + +A  F+  M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
           ++L+  P    + +LI      +DSD +      M+E G   +V  F+T++  ++  G +
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
                + D+M    +EPD+ ++++    + +AG+   A      M+  G+  + V +T++
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I   C A ++  A+ ++E M +    P    Y T++ GYG A +   A  LL+    KG 
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            P   +   +       G   EA +  K  E  + ++PN
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALK--KFEEMKKDAIPN 408



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/387 (20%), Positives = 171/387 (44%), Gaps = 9/387 (2%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N+++   + +   +   +I ++M  +G  P+ +T   ++  +    K  E+   +Q M 
Sbjct: 133 YNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMR 192

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + K  +P    Y  L+ A  +    +    +  +M   G   +   + TL R +A+ G  
Sbjct: 193 KLK-FRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A  +L EM++N + P+     + +  + K G ++ A +F + MK   +  + V + S+
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           I G L    +D +++A+ L E        P    ++T++  +  AG       + +   +
Sbjct: 312 I-GVL--CKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRR 368

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G  P +  ++ +     R G+  +A      M+K  + PN+  +  +I   C A K++ 
Sbjct: 369 KGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLET 427

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+ + + M + G+ PN+ T   ++    +A++   A  + + ++ K  RP   T   + +
Sbjct: 428 ALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIE 487

Query: 424 SWRAIGLAREAKRVLKSAEEDRQSMPN 450
                G   EA ++ +   +  Q +PN
Sbjct: 488 GLGRHGRVDEAYKLYEQMLDANQ-IPN 513



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/323 (22%), Positives = 144/323 (44%), Gaps = 2/323 (0%)

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
            YN+L+       K     ++L+ MS      P++ T   +V ++     + EA+  +  
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSI-AGFGPSNNTCIEIVLSFIKSRKLREAFTFIQT 190

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           M     +P    Y  L  A +   ++     +  +MQ      N      ++  + +EG 
Sbjct: 191 MRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           ++ A+  L  MK   + P++V++N  I  F      D   K    M+  G+  D VT+++
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTS 310

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++     A  + +  E+F+ M +    P  + ++ +  GY  AG+ + A S+L   R+ G
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
             P+VV +  ++S      ++  A+  +E+M +  I PNL TY  ++    +A +   A 
Sbjct: 371 CIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETAL 429

Query: 401 ELLQVMEEKGVRPKKSTIQLVAD 423
            +   M++ G+ P   T+ ++ D
Sbjct: 430 VVRDAMKDAGLFPNVITVNIMVD 452



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 1/213 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA+ +F     +G    ++ Y++L+    +  R      ++ ++ + G+ P+   +N ++
Sbjct: 672 EAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL 731

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +A  ++  + EA+  FQ MKD  C P   TY+ LI G   + K  ++    Q M Q +  
Sbjct: 732 DALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEM-QKQGF 790

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KPN  TY  ++       +I EA  +  K    G   D+  YN +    +       A +
Sbjct: 791 KPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYR 850

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           +  E +        +TC +++    K   +E A
Sbjct: 851 LFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 194/404 (48%), Gaps = 7/404 (1%)

Query: 23   EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
            +G  PTL+TY +L+  L ++   + I SL  ++ K G  P+  ++N++I+A  +  +  +
Sbjct: 1211 KGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQ 1270

Query: 83   AMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
            AM I ++M  SGC P   T+NTLI G    G+V K E  L+     +  + + PN  +Y 
Sbjct: 1271 AMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLR----EAIRRELNPNQLSYT 1326

Query: 140  ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
             L+  +C +  +  A +++ +M+  G  PD VT+  L       G+   A  +  +M   
Sbjct: 1327 PLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTER 1386

Query: 200  QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            QV P+     +++SG CK+  +  A   L  M E  V P+  V+ +LI GF+  ++    
Sbjct: 1387 QVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDA 1446

Query: 260  DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
             K    ME  G+ PD+V+ + ++  +   G+M +      +M K G  PD   ++ +  G
Sbjct: 1447 RKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISG 1506

Query: 320  YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
            Y + G    A   L  M K    PNVV ++++I+G+C       A  ++  M    ++PN
Sbjct: 1507 YAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPN 1566

Query: 380  LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
            + TY  L+    +  +  RA    + M      P   T+  + +
Sbjct: 1567 VVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVN 1610



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 191/430 (44%), Gaps = 38/430 (8%)

Query: 32   YTT--LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
            Y+T  LV  L  ++R +  L LI      G  P  + +N +I+     G++   + +  +
Sbjct: 1148 YSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGE 1207

Query: 90   MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
            M+  G  PT  TY +LI   G  G  E+ +  L L  + +   PN + YN ++ A C   
Sbjct: 1208 METKGFLPTLVTYGSLINWLGKKGDLEK-IGSLFLEMRKRGFSPNVQIYNSVIDALCKCR 1266

Query: 150  SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            S  +A  ++ +M ASG  PD +T+NTL       G   +AE  L E    ++ PN+ +  
Sbjct: 1267 SATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYT 1326

Query: 210  IIVSGYCKEGNMEDAMRFLY-----------------------------------RMKEL 234
             ++ G+C  G +  A   L                                    +M E 
Sbjct: 1327 PLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTER 1386

Query: 235  EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            +V P++ ++N LI G    +        L  M E  V+PD   ++T++D +  +  +G  
Sbjct: 1387 QVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDA 1446

Query: 295  QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
            ++IF+ M   GI PDI   + + KGY + G   +A   +++MRK G  P+   +TTVISG
Sbjct: 1447 RKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISG 1506

Query: 355  WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            +     +  A+     M +    PN+ TY +L+ GY +      AE L   M+ + + P 
Sbjct: 1507 YAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPN 1566

Query: 415  KSTIQLVADS 424
              T  ++  S
Sbjct: 1567 VVTYTILIGS 1576



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/400 (24%), Positives = 187/400 (46%), Gaps = 2/400 (0%)

Query: 27   PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
            PT + ++ L+  L R +RF ++   +  +   G  P      A++ A +++G + +A K+
Sbjct: 1039 PTPLAHSALLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKM 1098

Query: 87   FQKMKDS-GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
             +++++  G  P  +  N L+K      + +++ KL   M   K+   ++ +  +LVR  
Sbjct: 1099 CERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEM-LGKDSGADNYSTCVLVRGL 1157

Query: 146  CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
            C +  +EE   ++     +G  P  V YN L   Y + G+  R   +L EM+     P  
Sbjct: 1158 CLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTL 1217

Query: 206  RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
             T G +++   K+G++E        M++    PN+ ++NS+I      + +      L  
Sbjct: 1218 VTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQ 1277

Query: 266  MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
            M   G  PD++TF+T++      G + K +    + ++  + P+   ++ L  G+   GE
Sbjct: 1278 MFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGE 1337

Query: 326  PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
               A  +L  M   G  P+VV F  +I G   A K+  A+ + EKM E  + P++  Y  
Sbjct: 1338 LMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNV 1397

Query: 386  LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            L+ G  + +    A+ +L+ M EK V+P +     + D +
Sbjct: 1398 LISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGF 1437



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/419 (24%), Positives = 184/419 (43%), Gaps = 16/419 (3%)

Query: 24   GHRPTLITYTTLVAALTRQKRFKSILSLISKV-EKDGMKPDSILFNAMINACSESGNVDE 82
            G  PT      LVAA            +  +V E+ G  P+    N ++    E    D+
Sbjct: 1071 GAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDD 1130

Query: 83   AMKIFQKM--KDSGCKPTTSTYNT--LIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
            A K++ +M  KDSG       Y+T  L++G     + EE LKL++         P+   Y
Sbjct: 1131 ARKLYDEMLGKDSG----ADNYSTCVLVRGLCLERRVEEGLKLIE-ARWGAGCIPHVVFY 1185

Query: 139  NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
            N+L+  +C +  +     ++ +M   G  P  VTY +L     + G+  +   +  EM+ 
Sbjct: 1186 NVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRK 1245

Query: 199  NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
                PN +    ++   CK  +   AM  L +M      P+++ FN+LI G         
Sbjct: 1246 RGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCH---EGH 1302

Query: 259  VDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            V KA   + E     + P+ ++++ ++  +   G +    ++  +M+  G  PD+  F  
Sbjct: 1303 VRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGA 1362

Query: 316  LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
            L  G V AG+  +A  +   M +  V P+V ++  +ISG C    +  A +I E+M E  
Sbjct: 1363 LIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKN 1422

Query: 376  INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
            + P+   Y TL+ G+  ++    A ++ + ME KG+ P   +   +   +   G+  EA
Sbjct: 1423 VQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEA 1481



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/407 (22%), Positives = 170/407 (41%), Gaps = 51/407 (12%)

Query: 4    LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            L  +G   +A +     I     P  ++YT L+     +        L+ ++   G  PD
Sbjct: 1297 LCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPD 1356

Query: 64   SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             + F A+I+    +G V EA+ + +KM +    P  + YN LI G         +  +L+
Sbjct: 1357 VVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILE 1416

Query: 124  LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
             M  +KNV+P++  Y  L+  +    ++ +A  +   M   GI PD V+ N + + Y Q+
Sbjct: 1417 EM-LEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQF 1475

Query: 184  GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            G    A   +  M+     P+E T   ++SGY K+GN+  A+R+L  M + +  PN+V +
Sbjct: 1476 GMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTY 1535

Query: 244  NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            +SLI G+    D+D  +     M+   + P+VVT++ ++ +      + +    F+ M+ 
Sbjct: 1536 SSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLL 1595

Query: 304  AGIEPDIHVFSILAKGYVRA--------------------------------GEPQKA-- 329
                P+      L  G                                    G+P+ +  
Sbjct: 1596 NHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAY 1655

Query: 330  ESILTS----------------MRKYGVHPNVVMFTTVISGWCNAVK 360
             +I+ S                M K G  PN + F +++ G+C+  K
Sbjct: 1656 NAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 1702



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 110/294 (37%), Gaps = 51/294 (17%)

Query: 13   AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
            A  I   ++E+  +P    Y TL+    R +       +   +E  G+ PD +  NAMI 
Sbjct: 1411 AKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIK 1470

Query: 73   ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
               + G + EA+     M+  GC P   TY T+I GY   G    +L+ L  M + K  K
Sbjct: 1471 GYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRK-CK 1529

Query: 133  PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
            PN  TY+ L+  +C     + A  +   M A  + P+ VTY  L  +  +  +  RA   
Sbjct: 1530 PNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLY 1589

Query: 193  LFEMQNNQVRPNERTCGIIVSGY------------------------------------- 215
               M  N   PN+ T   +V+G                                      
Sbjct: 1590 FETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGD 1649

Query: 216  -------------CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
                         C+   + +A+ F  RM +    PN + F SL+ GF  +  S
Sbjct: 1650 PRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKS 1703



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/370 (20%), Positives = 145/370 (39%), Gaps = 36/370 (9%)

Query: 81   DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
            D      Q M  +G  PT +    L+  Y + G   ++ K+ + + +     P     N 
Sbjct: 1058 DAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNR 1117

Query: 141  LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
            L++    +   ++A  +  +M+      D                               
Sbjct: 1118 LLKLLVEQRRWDDARKLYDEMLGKDSGAD------------------------------- 1146

Query: 201  VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
               N  TC ++V G C E  +E+ ++ +         P++V +N LI G+    D     
Sbjct: 1147 ---NYSTC-VLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGL 1202

Query: 261  KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
              L  ME  G  P +VT+ ++++     G + K   +F +M K G  P++ +++ +    
Sbjct: 1203 LLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDAL 1262

Query: 321  VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
             +     +A  IL  M   G  P+++ F T+I+G C+   +++A     +     +NPN 
Sbjct: 1263 CKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQ 1322

Query: 381  KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
             +Y  L+ G+    +   A +LL  M  +G  P   T   +       G   EA  +++ 
Sbjct: 1323 LSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL-IVRE 1381

Query: 441  AEEDRQSMPN 450
               +RQ  P+
Sbjct: 1382 KMTERQVFPD 1391


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/467 (23%), Positives = 219/467 (46%), Gaps = 7/467 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L   GK   A  + + + + G  P +IT   +V  L + +R     S+   ++    
Sbjct: 416 IDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTC 475

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD++ + ++I      G VDEA K++++M D+   P    Y +LI+ +   G+ E+  K
Sbjct: 476 RPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHK 535

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M +     P+    N  +        IE+   +  ++   G  PDA +Y  L    
Sbjct: 536 IYNEMLR-LGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGL 594

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G  + A ++ + M+      + R    ++ G+CK G +  A + L  MK     P +
Sbjct: 595 VKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTV 654

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V + S+I G   I   D +D+A  L EE    G++ +VV +S+++D +   G + +   I
Sbjct: 655 VTYGSVIDGLAKI---DRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLI 711

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            +++++ G+ P+++ ++ L    V+A E  +A     SM+     PN + ++ +I G C 
Sbjct: 712 MEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCK 771

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             K  +A   +++M + G  PN+ TY T++ G  +A     A+ L +  +EKG     + 
Sbjct: 772 IRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAI 831

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQ 464
              + +       A +A R+ + A     S+  K   + ++S+H+ +
Sbjct: 832 YNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAE 878



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/424 (22%), Positives = 206/424 (48%), Gaps = 2/424 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  + E G+   +  +TTL+    R+ R  + LSL+ +++ + ++PD +L+N  I+   
Sbjct: 222 LFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFG 281

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           ++G VD A K F +MK +G      TY ++I       +  E+++L + M Q+K V P  
Sbjct: 282 KAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQV-PCA 340

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
             YN ++  +      E+A++++ +    G  P  V+YN +     + G+   A +   E
Sbjct: 341 YAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEE 400

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M+ + + PN  T  I++   CK G +E A+     MK+  + PN++  N ++      + 
Sbjct: 401 MKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQR 459

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D        ++    +PD VT+ ++++     G + +  ++++ M+ A   P+  V++ 
Sbjct: 460 LDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTS 519

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L + + + G  +    I   M + G  P++++  T +     A ++++  ++++++  +G
Sbjct: 520 LIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG 579

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
             P+ ++Y  L+ G  +A     A EL   M+E+G          V D +   G   +A 
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAY 639

Query: 436 RVLK 439
           ++L+
Sbjct: 640 QLLE 643



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/406 (22%), Positives = 179/406 (44%), Gaps = 13/406 (3%)

Query: 17  FNCL---IEE----GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNA 69
           FNCL   +EE    G  P+  T   +V +  + ++ +   + I  + K   +P    +  
Sbjct: 146 FNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTN 205

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK 129
           +I A S S + D  + +FQ+M++ G       + TLI+ +   G+ + +L LL  M  + 
Sbjct: 206 LIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSN- 264

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
           +++P+   YN+ +  +     ++ AW   ++M A+G+  D VTY ++     +      A
Sbjct: 265 SLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEA 324

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
            ++   M  N+  P       ++ GY   G  EDA   L R +     P++V +N ++  
Sbjct: 325 VELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSC 384

Query: 250 FLDIKDSDGVDKALTLMEEF--GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
              +     VD+AL   EE      P++ T++ ++D    AG +     + D M  AG+ 
Sbjct: 385 ---LGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLF 441

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P++   +I+     +A     A SI   +      P+ V + ++I G     ++  A  +
Sbjct: 442 PNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKL 501

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           YE+M +    PN   Y +L+  + +  +     ++   M   G  P
Sbjct: 502 YEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSP 547



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 127/279 (45%), Gaps = 2/279 (0%)

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
            YN+L    A+  +    EQ+L EM      P+  TC  IV  + K   + +A  F+  M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
           ++L+  P    + +LI      +DSD +      M+E G   +V  F+T++  ++  G +
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
                + D+M    +EPD+ ++++    + +AG+   A      M+  G+  + V +T++
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I   C A ++  A+ ++E M +    P    Y T++ GYG A +   A  LL+    KG 
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            P   +   +       G   EA +  K  E  + ++PN
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALK--KFEEMKKDAIPN 408



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/323 (22%), Positives = 144/323 (44%), Gaps = 2/323 (0%)

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
            YN+L+       K     ++L+ MS      P++ T   +V ++     + EA+  +  
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSI-AGFGPSNNTCIEIVLSFIKSRKLREAFTFIQT 190

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           M     +P    Y  L  A +   ++     +  +MQ      N      ++  + +EG 
Sbjct: 191 MRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           ++ A+  L  MK   + P++V++N  I  F      D   K    M+  G+  D VT+++
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTS 310

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++     A  + +  E+F+ M +    P  + ++ +  GY  AG+ + A S+L   R+ G
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
             P+VV +  ++S      ++  A+  +E+M +  I PNL TY  ++    +A +   A 
Sbjct: 371 CIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETAL 429

Query: 401 ELLQVMEEKGVRPKKSTIQLVAD 423
            +   M++ G+ P   T+ ++ D
Sbjct: 430 VVRDAMKDAGLFPNVITVNIMVD 452



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/387 (19%), Positives = 170/387 (43%), Gaps = 9/387 (2%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N+++   + +   +   +I ++M  +G  P+ +T   ++  +    K  E+   +Q M 
Sbjct: 133 YNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMR 192

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + K  +P    Y  L+ A  +    +    +  +M   G   +   + TL R +A+ G  
Sbjct: 193 KLK-FRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A  +L EM++N + P+     + +  + K G ++ A +  + MK   +  + V + S+
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           I G L    +D +++A+ L E        P    ++T++  +  AG       + +   +
Sbjct: 312 I-GVL--CKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRR 368

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G  P +  ++ +     R G+  +A      M+K  + PN+  +  +I   C A K++ 
Sbjct: 369 KGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLET 427

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+ + + M + G+ PN+ T   ++    +A++   A  + + ++ K  RP   T   + +
Sbjct: 428 ALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIE 487

Query: 424 SWRAIGLAREAKRVLKSAEEDRQSMPN 450
                G   EA ++ +   +  Q +PN
Sbjct: 488 GLGRHGRVDEAYKLYEQMLDANQ-IPN 513



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 1/213 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA+ +F     +G    ++ Y++L+    +  R      ++ ++ + G+ P+   +N ++
Sbjct: 672 EAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL 731

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +A  ++  + EA+  FQ MKD  C P   TY+ LI G   + K  ++    Q M Q +  
Sbjct: 732 DALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEM-QKQGF 790

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KPN  TY  ++       +I EA  +  K    G   D+  YN +    +       A +
Sbjct: 791 KPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYR 850

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           +  E +        +TC +++    K   +E A
Sbjct: 851 LFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/462 (24%), Positives = 212/462 (45%), Gaps = 14/462 (3%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +P + T T ++  L          S++  + K G+ P  + F  +IN     GNV  A
Sbjct: 101 GIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARA 160

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            +    ++D G +  + TY  +I G    G    ++  L+ +            Y+ ++ 
Sbjct: 161 ARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMD 220

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C    + EA N+   M + GIQPD V YN+L      +G    A  +L  M    + P
Sbjct: 221 SLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMP 280

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N +T  ++V  +CK+G +  A   +  M  + V P++V +NS+I G   +       K  
Sbjct: 281 NVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVF 340

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            LM   G  P++VT+S+++  W     + K   +  +MV +G+ PD+  +S L  G+ +A
Sbjct: 341 ELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKA 400

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+P+ A+ +  +M ++  HPN+     ++ G         A+S++ +M ++ +  N+  Y
Sbjct: 401 GKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIY 460

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE- 442
             +L G     +   A+EL   +  KG++     I +VA +    GL +E   +L  AE 
Sbjct: 461 NIVLDGMCSFGKLNDAQELFSCLPSKGIK-----IDVVAYTTMIKGLCKEG--LLDDAEN 513

Query: 443 -----EDRQSMPNKKD-EIAVESIHRKQNLSASNSTFLQIPG 478
                E+   +PN+    + V  + ++ ++S S    L + G
Sbjct: 514 LLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKG 555



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 204/428 (47%), Gaps = 2/428 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G    A    + L + GH+    TY  ++  L +       +  + K++    
Sbjct: 148 INGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNC 207

Query: 61  KPDSIL-FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
             D ++ ++ ++++  + G V EA+ +F  M   G +P    YN+LI G  N G+ +E+ 
Sbjct: 208 DLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEAT 267

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            LL  M + K + PN +T+N+LV  +C    I  A  ++  MV  G++PD VTYN++   
Sbjct: 268 TLLGNMMR-KGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISG 326

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           +    +   A ++   M +    PN  T   ++ G+CK  N+  A+  L  M    ++P+
Sbjct: 327 HCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPD 386

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +V +++LI GF      +   +    M E    P++ T + I+D         +   +F 
Sbjct: 387 VVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFR 446

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M K  +E ++ +++I+  G    G+   A+ + + +   G+  +VV +TT+I G C   
Sbjct: 447 EMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEG 506

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
            +  A ++  KM E G  PN  TY   + G  +     R+ + L +M+ KG+    +T +
Sbjct: 507 LLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTE 566

Query: 420 LVADSWRA 427
           L+   + A
Sbjct: 567 LLISYFSA 574



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 198/416 (47%), Gaps = 13/416 (3%)

Query: 11  HEAHYIFN-----CLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
           H  H +F       + + G  PT++T+ TL+  L  +            +E  G + +S 
Sbjct: 118 HLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSY 177

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCK-PTTSTYNTLIKGYGNVGKPEESLKLLQL 124
            + A+IN   ++G+   A+   +K+K   C       Y+T++      G   E+L L   
Sbjct: 178 TYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSG 237

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M+  K ++P+   YN L+   C+    +EA  ++  M+  GI P+  T+N L   + + G
Sbjct: 238 MTS-KGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDG 296

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
              RA+ ++  M +  V P+  T   ++SG+C    M DA++    M      PNLV ++
Sbjct: 297 MISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYS 356

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
           SLI G+   K+   ++KAL L+ E    G+ PDVVT+ST++  +  AG     +E+F  M
Sbjct: 357 SLIHGWCKTKN---INKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTM 413

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
            +    P++   +I+  G  +     +A S+   M K  +  NVV++  V+ G C+  K+
Sbjct: 414 HEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKL 473

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             A  ++  +   GI  ++  Y T++ G  +      AE LL  MEE G  P + T
Sbjct: 474 NDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFT 529



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/380 (22%), Positives = 158/380 (41%), Gaps = 36/380 (9%)

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
           N  P ++ +  L              +++  + + GI+PD  T   +         T   
Sbjct: 66  NPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFG 125

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
             +L  M    V P   T   +++G C EGN+  A RF   ++++    N   + ++I G
Sbjct: 126 FSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIING 185

Query: 250 FLDIKDSDG---------------------------------VDKALTL---MEEFGVKP 273
                D+ G                                 V +AL L   M   G++P
Sbjct: 186 LCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQP 245

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           D+V +++++    + G   +   +  +M++ GI P++  F++L   + + G   +A++I+
Sbjct: 246 DLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIM 305

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M   GV P+VV + +VISG C   +M  A+ ++E M   G  PNL TY +L+ G+ + 
Sbjct: 306 GFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKT 365

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKD 453
           K   +A  LL  M   G+ P   T   +   +   G    AK +  +  E  Q    +  
Sbjct: 366 KNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTC 425

Query: 454 EIAVESIHRKQNLSASNSTF 473
            I ++ + + Q  S + S F
Sbjct: 426 AIILDGLFKCQFHSEAISLF 445



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/253 (21%), Positives = 92/253 (36%), Gaps = 36/253 (14%)

Query: 222 EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
           E A+ F ++M  +   P    F  L    + +K        +  +   G+KPDV T + I
Sbjct: 53  EAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTII 112

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           ++             +   M K G++P +  F+ L  G    G   +A     S+   G 
Sbjct: 113 INCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGH 172

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKM----CEI----------------------- 374
             N   +  +I+G C A     A+   EK+    C++                       
Sbjct: 173 QSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEAL 232

Query: 375 ---------GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
                    GI P+L  Y +L+ G     +   A  LL  M  KG+ P   T  ++ D++
Sbjct: 233 NLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNF 292

Query: 426 RAIGLAREAKRVL 438
              G+   AK ++
Sbjct: 293 CKDGMISRAKTIM 305


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 237/498 (47%), Gaps = 26/498 (5%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NIL+     +G+  +A      +I+ G  P+L+T+ T++ A   Q       +L   +++
Sbjct: 188 NILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKE 247

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G  P+ + +N ++N   ++ ++ +A  ++++MK     P  +T+N L+ G+   G+ E+
Sbjct: 248 AGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREED 307

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
             +LL+ +SQ  ++  +   YNI V   C    ++EA   +  M+  GI P  V +N++ 
Sbjct: 308 RDRLLRDLSQSGSLSIS-SLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSII 366

Query: 178 RAYAQYG---ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
            AY++ G   + Y+A +M+ +     + P+  TC  ++ G  K   +++A   LY M   
Sbjct: 367 AAYSRAGLEEKAYKAYRMMVKFG---LFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVE 423

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            +  N   F  L+ G+  + D  G       ME  G+ PD V FS  ++  S  GL+ + 
Sbjct: 424 GLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEA 483

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
            ++F  M K G  P+  V++ L +G+  +G  Q+A  +   M + G+ P++     +I+G
Sbjct: 484 YDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIING 543

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C   +M+ A  ++  M   G+ P++ TY TL+ GY +A      +E++  M   G  P 
Sbjct: 544 LCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPD 603

Query: 415 KSTIQLVADSWRAIGL--AREAKRVLKSAEE--------DRQSMPNKKDEIAVESIHRKQ 464
            +T  +     R  GL   R+  R +   EE        D  +     + +  + + R  
Sbjct: 604 ITTYNI-----RLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVCTDVLERAM 658

Query: 465 NLSASNSTFLQIPGVVSS 482
            ++A       +P VV++
Sbjct: 659 IVTAKLLKMAFVPNVVTA 676



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 210/430 (48%), Gaps = 10/430 (2%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +I +G RP    +  ++    R+   K   SL+  ++K   +PD   +N +INA    G 
Sbjct: 140 MIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQ 199

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             +A+   + M D+GC P+  T+ T+I  + N G   E+  L   M +  ++ PN   YN
Sbjct: 200 TFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHI-PNVVCYN 258

Query: 140 ILVRAWCSKNSIEEAWNVVYK-MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
            L+  +     I +A N++Y+ M +  + PD  T+N L   + +YG     +++L ++  
Sbjct: 259 TLMNGYVKARDIGQA-NMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQ 317

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
           +          I VSG C  G +++AM+FL  M E  + P +V FNS+I  +      + 
Sbjct: 318 SGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEK 377

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
             KA  +M +FG+ P  +T S+++   S    + + +++  +M+  G+  +   F++L  
Sbjct: 378 AYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLD 437

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           GY R G+   A S+   M   G+HP+ V F+  I+G      +  A  ++ +M + G  P
Sbjct: 438 GYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMP 497

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           N   Y +L+ G+  + +   A  L + M  KG+ P   T  ++ +     GL +E +  +
Sbjct: 498 NNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIIN-----GLCKEGR--M 550

Query: 439 KSAEEDRQSM 448
           KSA +  ++M
Sbjct: 551 KSASDVFRNM 560



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 174/404 (43%), Gaps = 37/404 (9%)

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           EA++I  +M++ G +P++S    L K    +G      KLL+ M   +  +P +R +N +
Sbjct: 97  EALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRGMIH-QGPRPCNRNFNAV 155

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +  +C K  ++   +++  M     QPD   YN L  AY   G+T+ A   +  M +N  
Sbjct: 156 ILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGC 215

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            P+  T G +++ +C +GNM +A      MKE    PN+V +N+L+ G++  +D    + 
Sbjct: 216 TPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANM 275

Query: 262 ALTLMEEFGVKPDVVTFSTI-----------------------------------MDAWS 286
               M+   V PD  TF+ +                                   +    
Sbjct: 276 LYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLC 335

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
            AG + +  +  +DM++ GI P +  F+ +   Y RAG  +KA      M K+G+ P+ +
Sbjct: 336 WAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSL 395

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
             +++I G     ++Q A  +  +M   G+  N   +  LL GY        A  L   M
Sbjct: 396 TCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEM 455

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           E +G+ P         +    +GL  EA  V     + +  MPN
Sbjct: 456 EGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSK-KGFMPN 498



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/501 (22%), Positives = 211/501 (42%), Gaps = 78/501 (15%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   EA  +F+ + E GH P ++ Y TL+    + +       L  +++   +
Sbjct: 226 INAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAV 285

Query: 61  KPDSILFNAMI-------------------------------NACSE----SGNVDEAMK 85
            PD   FN ++                               N C      +G +DEAMK
Sbjct: 286 APDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMK 345

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
             + M + G  PT   +N++I  Y   G  E++ K  ++M +   + P+  T + L+   
Sbjct: 346 FLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVK-FGLFPSSLTCSSLIMGL 404

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                ++EA +++Y+M+  G+  +   +  L   Y + G+   A  +  EM+   + P+ 
Sbjct: 405 SKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDA 464

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
                 ++G    G +++A     +M +    PN  V+NSLI+GF +   S  + +AL L
Sbjct: 465 VAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCN---SGRLQEALML 521

Query: 266 MEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
             E    G+ PD+ T + I++     G M    ++F +M   G+ PDI  ++ L  GY +
Sbjct: 522 EREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCK 581

Query: 323 AGEPQKAESILTSM----------------------RKY-------------GVHPNVVM 347
           A +    + ++  M                      RK              GV P+ V 
Sbjct: 582 AFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVT 641

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           + TV++G C  V ++RAM +  K+ ++   PN+ T   LL  + +   P +     Q + 
Sbjct: 642 YNTVMNGVCTDV-LERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQGMPEKTIMWGQKLN 700

Query: 408 EKGVRPKKSTIQLVADSWRAI 428
           E      + +I+L+  ++R I
Sbjct: 701 EISFGFDEISIKLMDRAYRNI 721



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 117/257 (45%), Gaps = 18/257 (7%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA+ +F  + ++G  P    Y +L+       R +  L L  ++ + G+ PD    
Sbjct: 478 GLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTT 537

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +IN   + G +  A  +F+ M  +G  P   TYNTLI GY          K    +S 
Sbjct: 538 NIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGY---------CKAFDTVST 588

Query: 128 DKNVK--------PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           D+ V         P+  TYNI +   C+   +  A  ++ +++++G+ PD VTYNT+   
Sbjct: 589 DEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNG 648

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
                   RA  +  ++      PN  T  +++S +CK+G  E  + +  ++ E+    +
Sbjct: 649 VCT-DVLERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQGMPEKTIMWGQKLNEISFGFD 707

Query: 240 LVVFNSLIKGFLDIKDS 256
            +    + + + +I+D+
Sbjct: 708 EISIKLMDRAYRNIQDN 724



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 108/229 (47%)

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++ G+ K     +A+  + RM+E+ + P+      L K  L I D   V K L  M   G
Sbjct: 85  LMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRGMIHQG 144

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
            +P    F+ ++  +   G +   + +   M K   +PD++ ++IL   Y   G+   A 
Sbjct: 145 PRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDAL 204

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
             +  M   G  P++V F TVI+ +CN   M  A ++++ M E G  PN+  Y TL+ GY
Sbjct: 205 GWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGY 264

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            +A+   +A  L + M+ K V P  +T  ++       G   +  R+L+
Sbjct: 265 VKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLR 313



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/225 (21%), Positives = 100/225 (44%)

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
            + D    +TL R + +      A +++  M+   +RP+     I+     + G+     
Sbjct: 75  FESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVW 134

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           + L  M      P    FN++I GF         +  L +M++F  +PDV  ++ +++A+
Sbjct: 135 KLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAY 194

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
            + G           M+  G  P +  F  +   +   G   +A ++   M++ G  PNV
Sbjct: 195 CTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNV 254

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           V + T+++G+  A  + +A  +YE+M    + P+  T+  L+ G+
Sbjct: 255 VCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGH 299


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 199/436 (45%), Gaps = 36/436 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A ++++ +++ G  P  ++Y TL+  L +   F   L+L + +   G    +  F
Sbjct: 443 GAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAF 502

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N MIN   +   + EA + F +MK+ G +P   TY TLI GY  +G  EE+ K+ + M +
Sbjct: 503 NTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEK 562

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  + P+   YN L+          E  +++ +M   G+ P+ VTY TL   +   G   
Sbjct: 563 EA-ILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLD 621

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH---------- 237
           +A    F+M      PN   C  IVS   + G +++A   L +M  L+V           
Sbjct: 622 KAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLH 681

Query: 238 -------------------------PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
                                    PN VV+N  I G       D   K  + +   G  
Sbjct: 682 KADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFS 741

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           PD  T+ T++  +S+AG +     + D+M+K G+ P+I  ++ L  G  ++G   +A+ +
Sbjct: 742 PDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKL 801

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              +   G+ PNV+ +  +I G+C     + A+ +  KM + GI+P+L TY  L++G+ +
Sbjct: 802 FDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCK 861

Query: 393 AKQPWRAEELLQVMEE 408
                +A  LL  M E
Sbjct: 862 QGDMGKATNLLDEMRE 877



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 205/422 (48%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV KG+   A  +++ +   G  P + T + +V A  +       +  + +++  G + +
Sbjct: 193 LVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELN 252

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N++I+ C   G+++ A  + + M + G      T   LIKGY    K EE+ K+L+
Sbjct: 253 VVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLR 312

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + + +  ++  Y +L+  +C    +++A  +  +M+  G++ +    N L   Y + 
Sbjct: 313 EMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKN 372

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   AE++L  M +  + P   +   ++ G+C+EG +  A+     M  + +  N+V  
Sbjct: 373 GQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTH 432

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           NSL+KG   +   +       LM + GV PD V++ T++D     G   +   +++D++ 
Sbjct: 433 NSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILA 492

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G     + F+ +  G+ +  +  +AE     M++ G  P+ V + T+I G+C    ++ 
Sbjct: 493 RGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEE 552

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  + EKM +  I P+++ Y +L+ G  ++K+     +LL  M  KG+ P   T   +  
Sbjct: 553 AFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIA 612

Query: 424 SW 425
            W
Sbjct: 613 GW 614



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 96/446 (21%), Positives = 209/446 (46%), Gaps = 45/446 (10%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L   G+   A  ++N ++  G+  +   + T++    + ++        +++++ G 
Sbjct: 471 LDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGF 530

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD + +  +I+   + GNV+EA K+ +KM+     P+   YN+LI G     K  E + 
Sbjct: 531 EPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMD 590

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M   K + PN  TY  L+  WC +  +++A+   + M+  G  P+ +  + +  + 
Sbjct: 591 LLSEMCL-KGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSL 649

Query: 181 AQYGETYRAEQMLFEMQNNQV-----------------------------------RPNE 205
            + G    A  +L +M N  V                                    PN 
Sbjct: 650 YRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNS 709

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
               I ++G CK G ++DA +    +      P+   + +LI G+     +  V+ A +L
Sbjct: 710 VVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGY---SAAGNVNDAFSL 766

Query: 266 MEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
            +E    G+ P+++T++ +++    +G + + Q++FD +   G+ P++  ++IL  GY +
Sbjct: 767 RDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCK 826

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G  ++A  +   M K G+ P+++ ++ +I G+C    M +A ++ ++M E+  + N+  
Sbjct: 827 NGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAK 886

Query: 383 YETLLWGY---GEAKQPWRAEELLQV 405
           +  L+ G+   GE K+  +   ++ +
Sbjct: 887 FVKLVEGHVKCGEVKKIAKLHNMMHI 912



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/434 (23%), Positives = 202/434 (46%), Gaps = 1/434 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+    +G   +A  ++N ++  G +  ++T+ +L+  L R   F+  L +   + K G+
Sbjct: 401 MDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGV 460

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + +  +++   + G    A+ ++  +   G   +T  +NT+I G+  + K  E+ +
Sbjct: 461 TPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEE 520

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M ++   +P+  TY  L+  +C   ++EEA+ V  KM    I P    YN+L    
Sbjct: 521 TFNRM-KELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGL 579

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +T     +L EM    + PN  T G +++G+C EG ++ A    + M E    PN+
Sbjct: 580 FKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNV 639

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           ++ + ++     +   D  +  L  M    V  D   F  +  A        K  +  D+
Sbjct: 640 IICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDE 699

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
             K+   P+  V++I   G  ++G+   A+ I +S+   G  P+   + T+I G+  A  
Sbjct: 700 SSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGN 759

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A S+ ++M + G+ PN+ TY  L+ G  ++    RA++L   +  KG+ P   +  +
Sbjct: 760 VNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNI 819

Query: 421 VADSWRAIGLAREA 434
           + D +   G  REA
Sbjct: 820 LIDGYCKNGNTREA 833



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/445 (23%), Positives = 206/445 (46%), Gaps = 37/445 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + I   KG    A ++F+ + + G  P+L +   L+++L R+    + + +   + + G+
Sbjct: 155 LKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGI 214

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD    + M+NA  + G V+ A+   ++M   G +    TYN+                
Sbjct: 215 VPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNS---------------- 258

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
                               L+    S   +E A  V+  M   GI  + VT   L + Y
Sbjct: 259 --------------------LIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGY 298

Query: 181 AQYGETYRAEQMLFEMQNNQ-VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
            +  +   AE++L EM+ ++ +  +E   G+++ GYC+   M+DA+R    M  + +  N
Sbjct: 299 CRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMN 358

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           L + N+LI G+         ++ L  M ++ ++P+  ++ST+MD +   GL+ K   +++
Sbjct: 359 LFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYN 418

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M++ GI+ ++   + L KG  R G  + A  +   M K GV P+ V + T++       
Sbjct: 419 EMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMG 478

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           +  RA++++  +   G   +   + T++ G+ + ++   AEE    M+E G  P   T +
Sbjct: 479 EFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYR 538

Query: 420 LVADSWRAIGLAREAKRVLKSAEED 444
            + D +  +G   EA +V +  E++
Sbjct: 539 TLIDGYCKLGNVEEAFKVKEKMEKE 563



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 159/343 (46%), Gaps = 36/343 (10%)

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           +L+   ++ K +   ++++++ +C K  I+ A +V   M   G  P   + N L  +  +
Sbjct: 136 ELVRVFEDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVR 195

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            GE+  A  +   +    + P+  TC I+V+ YCK+G +  A+ F+  M  L    N+V 
Sbjct: 196 KGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVT 255

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS---------------- 286
           +NSLI G + I D +  +  L LM E G+  + VT + ++  +                 
Sbjct: 256 YNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREME 315

Query: 287 -SAGLM-----------GKCQ--------EIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            S G++           G C+         + D+M+  G+  ++ + + L  GY + G+ 
Sbjct: 316 RSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQV 375

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +AE +L  M  + + P    ++T++ G+C    + +A+S+Y +M  +GI  N+ T+ +L
Sbjct: 376 SEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSL 435

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           L G         A  +  +M ++GV P + +   + D    +G
Sbjct: 436 LKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMG 478



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 18/206 (8%)

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           + +LVV+N L++ F                E+F   P V  F  I+  +   G++     
Sbjct: 128 YSSLVVWNELVRVF----------------EDFKFSPTV--FDMILKIYCEKGMIKNALH 169

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +FD+M K G  P +   + L    VR GE   A  +   + + G+ P+V   + +++ +C
Sbjct: 170 VFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYC 229

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
               +  A+   ++M  +G   N+ TY +L+ G        RAE +L++M E+G+   K 
Sbjct: 230 KDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKV 289

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAE 442
           T+ L+   +       EA++VL+  E
Sbjct: 290 TLTLLIKGYCRQCKLEEAEKVLREME 315


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 204/421 (48%), Gaps = 1/421 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++E    P +  Y  +++   +  R ++   ++++++  G  PD + +N MI +      
Sbjct: 128 ILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRK 187

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +  A+K+  ++    C PT  TY  LI+     G   E++KLL+ M   + + P+  TYN
Sbjct: 188 LGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLA-RGLLPDMYTYN 246

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++R  C +  +E A  ++  + + G +PD ++YN L RA+   G+    E+++ EM + 
Sbjct: 247 AIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 306

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              PN+ T  I++S  C+ G +++A+  L  M E E+ P+   ++ LI         D  
Sbjct: 307 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 366

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
              +  M   G  PD+V ++TI+ A    G   +  EIF+ +   G  P++  ++ +   
Sbjct: 367 IGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISA 426

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
               G+  +A  ++ +M   GV P+ + + ++IS  C    ++ A+ + + M + G  P 
Sbjct: 427 LWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPT 486

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + +Y  +L G  + ++   A  +   M EKG RP ++T  L+ +     G   EA  +  
Sbjct: 487 VISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELAN 546

Query: 440 S 440
           S
Sbjct: 547 S 547



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 194/390 (49%), Gaps = 3/390 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  + N +   G  P ++TY  ++ +L  +++    L ++ ++  D   P  I +  +I 
Sbjct: 156 ATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIE 215

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
           A    G ++EAMK+ ++M   G  P   TYN +I+G    G  E + +L+  ++  K  K
Sbjct: 216 ATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTS-KGCK 274

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+  +YNIL+RA+ ++   +E   +V +M + G +P+ VTY+ L  +  ++G    A  +
Sbjct: 275 PDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISV 334

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           L  M   ++ P+  +   ++S  CKEG ++ A+  +  M      P++V +N+++     
Sbjct: 335 LKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCK 394

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
             +++   +    +   G  P+V +++T++ A  S G   +   +   M+  G++PD   
Sbjct: 395 NGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEIT 454

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++ L     R G  ++A  +L  M + G  P V+ +  V+ G C   ++  A+ ++ +M 
Sbjct: 455 YNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMI 514

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           E G  PN  TY  L+ G G A   WR E +
Sbjct: 515 EKGCRPNETTYILLIEGIGFAG--WRTEAM 542



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/439 (25%), Positives = 194/439 (44%), Gaps = 43/439 (9%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK +E+ Y   CL+ +G+ P +I  T L+      K  +   S + ++ +   +PD   +
Sbjct: 82  GKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKA-SRVMEILESHTEPDVFAY 140

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           NA+I+   +   ++ A ++  +MK  G  P   TYN +I    N  K   +LK+L  +  
Sbjct: 141 NAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLL 200

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D N  P   TY IL+ A   +  I EA  ++ +M+A G+ PD  TYN             
Sbjct: 201 D-NCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNA------------ 247

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
                                  I+ G CKEG +E A   +  +      P+++ +N L+
Sbjct: 248 -----------------------IIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILL 284

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           + FL+    D  +K +  M   G +P+ VT+S ++ +    G + +   +   M++  + 
Sbjct: 285 RAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELT 344

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD + +  L     + G    A  I+  M   G  P++V + T+++  C      +A+ I
Sbjct: 345 PDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEI 404

Query: 368 YEKMCEIGINPNLKTYETL---LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           + K+  +G  PN+ +Y T+   LW  G+     RA  ++  M  KGV P + T   +   
Sbjct: 405 FNKLRGMGCPPNVSSYNTMISALWSCGDRS---RALGMVPAMISKGVDPDEITYNSLISC 461

Query: 425 WRAIGLAREAKRVLKSAEE 443
               GL  EA  +L   E+
Sbjct: 462 LCRDGLVEEAIGLLDDMEQ 480



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 154/348 (44%), Gaps = 36/348 (10%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  +EA  +   ++  G  P + TY  ++  + ++   +    LI+ +   G KPD I 
Sbjct: 220 EGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVIS 279

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N ++ A    G  DE  K+  +M   GC+P   TY+ LI      G+ +E++ +L++M 
Sbjct: 280 YNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMI 339

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + K + P+  +Y+ L+ A C +  ++ A  ++  M+++G  PD V YNT           
Sbjct: 340 E-KELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNT----------- 387

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
                                   I++  CK GN   A+    +++ +   PN+  +N++
Sbjct: 388 ------------------------ILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTM 423

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I       D       +  M   GV PD +T+++++      GL+ +   + DDM ++G 
Sbjct: 424 ISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGF 483

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
            P +  ++I+  G  +      A  +   M + G  PN   +  +I G
Sbjct: 484 RPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEG 531



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 118/246 (47%), Gaps = 1/246 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            + +GK  E   +   +   G  P  +TY+ L+++L R  R    +S++  + +  + PD
Sbjct: 287 FLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPD 346

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +  ++ +I+A  + G +D A+ I   M  +GC P    YNT++      G   ++L++  
Sbjct: 347 TYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFN 406

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            + +     PN  +YN ++ A  S      A  +V  M++ G+ PD +TYN+L     + 
Sbjct: 407 KL-RGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRD 465

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A  +L +M+ +  RP   +  I++ G CK   ++DA+     M E    PN   +
Sbjct: 466 GLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTY 525

Query: 244 NSLIKG 249
             LI+G
Sbjct: 526 ILLIEG 531



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/258 (20%), Positives = 106/258 (41%), Gaps = 34/258 (13%)

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF------ 269
           CK G   +++ FL  +      P++++   LIKGF + K+ +   + + ++E        
Sbjct: 79  CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVF 138

Query: 270 ----------------------------GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
                                       G  PD+VT++ ++ +  +   +G   ++ D +
Sbjct: 139 AYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQL 198

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           +     P +  ++IL +  +  G   +A  +L  M   G+ P++  +  +I G C    +
Sbjct: 199 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 258

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           +RA  +   +   G  P++ +Y  LL  +    +    E+L+  M  +G  P K T  ++
Sbjct: 259 ERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 318

Query: 422 ADSWRAIGLAREAKRVLK 439
             S    G   EA  VLK
Sbjct: 319 ISSLCRFGRIDEAISVLK 336


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/449 (22%), Positives = 214/449 (47%), Gaps = 39/449 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L  +G+  +A  + + ++  G +P ++TYT L+ A+ +   F+  ++++ ++   G 
Sbjct: 149 IRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGC 208

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +N +IN     G VD+A  +  ++   GC+P T +Y TL+KG     + ++  +
Sbjct: 209 TPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEE 268

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV------------------ 162
           L   M  +KN  PN+ T+++L+R +C    +E A  V+ +M                   
Sbjct: 269 LFAEM-MEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSI 327

Query: 163 -----------------ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                            + G  PD ++Y T+ +   +      A+++L EM  N   PNE
Sbjct: 328 CKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNE 387

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T    +   C++G +E A+  + +M+E      +V +N+L+ GF        +D AL L
Sbjct: 388 VTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFC---VQGHIDSALEL 444

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
                 KP+ +T++T++    +A  +    E+  +M+     P++  F++L   + + G 
Sbjct: 445 FRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGF 504

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A  ++  M ++G  PN++ + T+  G       + A+ +   +   G++P++ T+ +
Sbjct: 505 LDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSS 564

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
           ++    +  +   A ++  + ++ G+RPK
Sbjct: 565 IIGILSKEDRVEEAIQMFHLAQDIGMRPK 593



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 188/397 (47%), Gaps = 4/397 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   TYT L+  L  + R    LSL+  + + G +P+ + +  ++ A  ++   ++AM +
Sbjct: 140 PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAV 199

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M+  GC P   TYN +I G    G+ +++  LL  +      +P+  +Y  L++  C
Sbjct: 200 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFS-YGCQPDTVSYTTLLKGLC 258

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           +    ++   +  +M+     P+ VT++ L R + + G   RA Q+L +M  ++   N  
Sbjct: 259 ASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTT 318

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
            C I+++  CK+G ++DA +FL  M     +P+ + + +++KG    +  +   + L  M
Sbjct: 319 LCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEM 378

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
                 P+ VTF+T +      GL+ +   + + M + G    +  ++ L  G+   G  
Sbjct: 379 VRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGH- 437

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
              +S L   R     PN + +TT+++G CNA ++  A  +  +M      PN+ T+  L
Sbjct: 438 --IDSALELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVL 495

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           +  + +      A EL++ M E G  P   T   + D
Sbjct: 496 VNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFD 532



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 198/457 (43%), Gaps = 55/457 (12%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  +G+  +A  + N L   G +P  ++YTTL+  L   KR+  +  L +++ +   
Sbjct: 219 INGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNC 278

Query: 61  KPDSILF-----------------------------------NAMINACSESGNVDEAMK 85
            P+ + F                                   N +IN+  + G VD+A K
Sbjct: 279 MPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFK 338

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
               M   GC P T +Y T++KG     +  ++ +LL+ M ++ N  PN+ T+N  +   
Sbjct: 339 FLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRN-NCPPNEVTFNTFICIL 397

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C K  IE+A  ++ +M   G     VTYN L   +   G    A ++   M     +PN 
Sbjct: 398 CQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNT 454

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI-----KGFLDIKDSDGVD 260
            T   +++G C    ++ A   +  M   +  PN+V FN L+     KGFL        D
Sbjct: 455 ITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFL--------D 506

Query: 261 KALTLME---EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
           +A+ L+E   E G  P+++T++T+ D  +         E+   +V  G+ PD+  FS + 
Sbjct: 507 EAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSII 566

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
               +    ++A  +    +  G+ P  +++  ++ G C   ++  A+     M   G  
Sbjct: 567 GILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCM 626

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
           PN  TY  L+ G         A++LL ++  +GV  K
Sbjct: 627 PNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVSK 663



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 184/404 (45%), Gaps = 11/404 (2%)

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           +DG  PD  L   +I      G   +A ++ +  + SG       YNTL+ GY   G  +
Sbjct: 68  RDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLD 127

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
            + +L+  M     V P+  TY  L+R  C +  + +A +++  M+  G QP+ VTY  L
Sbjct: 128 AARRLIGSMP----VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVL 183

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
             A  +     +A  +L EM+     PN  T  +I++G C+EG ++DA   L R+     
Sbjct: 184 LEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGC 243

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P+ V + +L+KG    K  D V++    M E    P+ VTF  ++  +   G++ +  +
Sbjct: 244 QPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQ 303

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +   M +     +  + +I+     + G    A   L +M  YG +P+ + +TTV+ G C
Sbjct: 304 VLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLC 363

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
            A +   A  + ++M      PN  T+ T +    +     +A  L++ M+E G      
Sbjct: 364 RAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHG-----C 418

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESI 460
           T+ +V  +    G   +    + SA E  +SMP K + I   ++
Sbjct: 419 TVGVVTYNALVNGFCVQGH--IDSALELFRSMPCKPNTITYTTL 460



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 143/356 (40%), Gaps = 32/356 (8%)

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +L++L +      P+      L+R  C +    +A  V+     SG   D   YNTL   
Sbjct: 60  RLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAG 119

Query: 180 YAQYGE------------------TYR--------------AEQMLFEMQNNQVRPNERT 207
           Y +YG                   TY               A  +L +M     +PN  T
Sbjct: 120 YCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVT 179

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
             +++   CK    E AM  L  M+     PN+V +N +I G       D     L  + 
Sbjct: 180 YTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLF 239

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
            +G +PD V+++T++    ++      +E+F +M++    P+   F +L + + R G  +
Sbjct: 240 SYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVE 299

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           +A  +L  M ++    N  +   VI+  C   ++  A      M   G NP+  +Y T+L
Sbjct: 300 RAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVL 359

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            G   A++   A+ELL+ M      P + T           GL  +A  +++  +E
Sbjct: 360 KGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQE 415



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 69/142 (48%), Gaps = 15/142 (10%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  + + L+ +G  P +IT+++++  L+++ R +  + +    +  GM+P ++++N ++
Sbjct: 542 DALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKIL 601

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
               +   +D A+     M  +GC P  STY  LI+G    G  +E+  LL ++      
Sbjct: 602 LGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCS---- 657

Query: 132 KPNDRTYNILVRAWCSKNSIEE 153
                      R   SKN IEE
Sbjct: 658 -----------RGVVSKNLIEE 668


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 187/396 (47%), Gaps = 2/396 (0%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           +YT L+  L    R      + +K+ +   +P    +  +++   +   V EA  +  +M
Sbjct: 163 SYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEM 222

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
            + G  P   TYN LI G    G+ ++  KLL+ M   ++  P+  TY  +V   C    
Sbjct: 223 VNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRH-SPDCWTYTQVVHGLCKHGK 281

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           +     V+++ +  G+  + +TYN L   Y + G+   A  +L  M+ N+V P  +T   
Sbjct: 282 VGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNE 341

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++ G+C  G +  AM FL +M    + PN V FNSLI G   + +     + L LMEE+G
Sbjct: 342 VIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYG 401

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           V PD  T++  +DA    G + +   +F  +   GI+    +++ L  GY + G+   A 
Sbjct: 402 VLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAF 461

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            ++  M      P+V  + T+I G C   ++ RA+ + +KM + GI P   T+  L+   
Sbjct: 462 GLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQM 521

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQL-VADSW 425
              K+   A ++ + M   G +P K T  L ++  W
Sbjct: 522 LWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDW 557



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 115/454 (25%), Positives = 202/454 (44%), Gaps = 39/454 (8%)

Query: 6   GKGKPHEAHYI--FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           G   P  AH +  F  +++ G  P   TY TL+ A  +        + + ++ + G+ PD
Sbjct: 65  GSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPD 124

Query: 64  SILFNAMI-----------------------NACSE-------------SGNVDEAMKIF 87
           +  +N ++                        AC +             +G +D+A ++F
Sbjct: 125 TFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVF 184

Query: 88  QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
            KM    C+P   TY  L+ G   V +  E+  LL  M  +K V PN  TYN L+   C 
Sbjct: 185 AKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMV-NKGVVPNVVTYNALIGGLCQ 243

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
           +   ++   ++ KM      PD  TY  +     ++G+     ++L E     V     T
Sbjct: 244 EGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLT 303

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
              +++GYCK G+M+ A+  L  MK   V+P +  FN +I GF            LT M 
Sbjct: 304 YNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMA 363

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
             G+ P+ VTF++++    S G       + D M + G+ PD   ++I        G+ +
Sbjct: 364 GAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLE 423

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           +A S+ + +   G+  + V++T+++ G+C    +  A  + EKM      P++ TY TL+
Sbjct: 424 EAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLI 483

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            G  + K+  RA +LL  M+++G+ P   T  ++
Sbjct: 484 DGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNIL 517



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 188/390 (48%), Gaps = 15/390 (3%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +   ++ +G  P ++TY  L+  L ++ RF  +  L+ K+E     PD   +  ++
Sbjct: 214 EAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVV 273

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   + G V    K+  +    G      TYN LI GY   G  + +L +LQLM +++ V
Sbjct: 274 HGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNR-V 332

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P  +T+N ++  +C    + +A   + +M  +G+ P+ VT+N+L       GE   A +
Sbjct: 333 NPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALR 392

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL--YRMKELEVHPNLVVFNSLIKG 249
           +L  M+   V P+ +T  I +   C EG +E+A        MK ++ H   V++ SL+ G
Sbjct: 393 LLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHN--VIYTSLVHG 450

Query: 250 FLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +  + D   +D A  LME+   +   PDV T++T++D       + +  ++ D M K GI
Sbjct: 451 YCQVGD---IDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGI 507

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS-GWCNAVKMQR-- 363
           EP    F+IL K  +   +   A  +   M   G  P+   +T  IS  W      +   
Sbjct: 508 EPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENI 567

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
            M++ E M E G+ P+++TY  ++  Y +A
Sbjct: 568 DMAVVE-MHEAGVFPDVETYNAIIKAYVDA 596



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 207/457 (45%), Gaps = 25/457 (5%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK      + +  I +G    ++TY  L+    +    K+ L ++  ++++ + P 
Sbjct: 276 LCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPG 335

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              FN +I+     G V +AM    +M  +G  P T T+N+LI G  +VG+ + +L+LL 
Sbjct: 336 VQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLD 395

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           LM ++  V P+ +TY I + A C +  +EEA ++   +   GI+   V Y +L   Y Q 
Sbjct: 396 LM-EEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQV 454

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A  ++ +M +    P+  T   ++ G CK   ++ A+  L +MK+  + P    F
Sbjct: 455 GDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTF 514

Query: 244 NSLIKGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFST-IMDAWSSAGLMGKCQEIFD-- 299
           N LIK  L D K +D   K    M   G KPD  T++  I   W         +E  D  
Sbjct: 515 NILIKQMLWDKKHADAA-KMYEQMISSGCKPDKQTYTLKISTDWFEGATK---EENIDMA 570

Query: 300 --DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
             +M +AG+ PD+  ++ + K YV AG  +KA      M    + P+   ++ +++  CN
Sbjct: 571 VVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCN 630

Query: 358 --------------AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
                          V ++    ++E+MCE    P + TY+ LL G     +    E LL
Sbjct: 631 KDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLL 690

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
             M+   +   +     +   +  + + REA    +S
Sbjct: 691 LKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRS 727



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 178/414 (42%), Gaps = 38/414 (9%)

Query: 25  HRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAM 84
           H   LI Y++     +R  R   +L+    + K G  P+   +N +INA  +   + +A 
Sbjct: 54  HNAALIAYSS---RGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADAR 110

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
               +M+++G  P T TYN L+ G    G    +  L   M +      +  +Y IL++ 
Sbjct: 111 AALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKG 170

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
            C+   I++A  V  KM     +P   TY  L     +      AE +L EM N  V PN
Sbjct: 171 LCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPN 230

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   ++ G C+EG  +D  + L +M E++ H                           
Sbjct: 231 VVTYNALIGGLCQEGRFDDVTKLLEKM-EIQRH--------------------------- 262

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
                   PD  T++ ++      G +G   ++  + +  G+  ++  ++ L  GY + G
Sbjct: 263 -------SPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGG 315

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           + + A  +L  M++  V+P V  F  VI G+C   K+ +AM+   +M   G++PN  T+ 
Sbjct: 316 DMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFN 375

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           +L+ G     +   A  LL +MEE GV P + T  +  D+    G   EA  + 
Sbjct: 376 SLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLF 429



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 101/429 (23%), Positives = 185/429 (43%), Gaps = 28/429 (6%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G+  EAH +F+CL  +G +   + YT+LV    +     S   L+ K+  +  
Sbjct: 413 IDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENC 472

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +N +I+   +   +D A+ +  KMK  G +PTT T+N LIK      K  ++ K
Sbjct: 473 MPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAK 532

Query: 121 LLQLMSQDKNVKPNDRTYNILVRA-WCSKNSIEEAWNV-VYKMVASGIQPDAVTYNTLAR 178
           + + M      KP+ +TY + +   W    + EE  ++ V +M  +G+ PD  TYN + +
Sbjct: 533 MYEQMIS-SGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIK 591

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           AY   G   +A     +M +  + P+  T  I+++  C   N +D+  F           
Sbjct: 592 AYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMC---NKDDSDAF----------- 637

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
                N  I   +D+++   + +    M E    P + T+  ++    +   + + + + 
Sbjct: 638 ----DNEKIWKMVDVRN---LQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLL 690

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
             M    I  D  +   L   Y      ++A     SM      P +     ++SG C++
Sbjct: 691 LKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDS 750

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK----GVRPK 414
                A+SI+  M  +G N +   ++ L+    E        E+L VM+ K      R  
Sbjct: 751 GDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTY 810

Query: 415 KSTIQLVAD 423
            S ++LVA+
Sbjct: 811 ASLVRLVAE 819


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 196/411 (47%), Gaps = 14/411 (3%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT  TY  L+ AL R+   +     +S + + G +PD+  FN++I     +  ++ A  +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F KM   G      +Y  LI+G+   G+ +E+L+L + M+Q     P+  T+  LV+  C
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ-----PDMYTHAALVKGLC 241

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                EE   ++ KM   G +P    Y  L   + +  +   AE++L EM ++ + P   
Sbjct: 242 DAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVV 301

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL- 265
           TC I+V+ YC+EG M  A+R    M+     PN+  +N++++GF    ++  V KA+ L 
Sbjct: 302 TCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFC---NAGKVYKAMALL 358

Query: 266 --MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M E GV+PDVVT++ ++      G +G    +   M   G+  D + +++L     + 
Sbjct: 359 DQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKT 418

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+  +A S+   +   G+ PN V F TVI+G C A K   A +  E M   G  P+  TY
Sbjct: 419 GKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTY 478

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW---RAIGLA 431
              +    + K        +  M +K V+P      +V +     R  GLA
Sbjct: 479 SPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLA 529



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 215/475 (45%), Gaps = 42/475 (8%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           H   Y+ + ++  G RP   T+ +L+    R ++ +    L  K+   G   D++ + A+
Sbjct: 147 HAQRYL-SLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAAL 205

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           I    E+G +DEA+++F++M     +P   T+  L+KG  + G+ EE L +LQ M ++  
Sbjct: 206 IEGFCEAGRIDEALELFREMT----QPDMYTHAALVKGLCDAGRGEEGLCMLQKM-KELG 260

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
            +P  R Y  LV  WC +   EEA  ++ +M  SG+ P  VT   +  AY + G    A 
Sbjct: 261 WRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAV 320

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG- 249
           ++   M+     PN  T   IV G+C  G +  AM  L +M+E  V P++V +N LI+G 
Sbjct: 321 RVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQ 380

Query: 250 -----------FLDIKDSDG--------------------VDKALTL---MEEFGVKPDV 275
                       L + + +G                    VD+A +L   +E  G++P+ 
Sbjct: 381 CIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNS 440

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           VTF+T+++    AG         ++M+ AG  PD + +S   +   +    Q+    +  
Sbjct: 441 VTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDE 500

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M +  V P+ V +T VI+   N      A  I+ +M   G +P++ TY T +  Y    +
Sbjct: 501 MLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGR 560

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
              AE ++  M++            + D   +IG    A  +LK       SMPN
Sbjct: 561 LDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHM-TGVASMPN 614



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 184/383 (48%), Gaps = 7/383 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  E   +   + E G RPT   Y  LV    R+++ +    +++++   G+ P 
Sbjct: 240 LCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPC 299

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +    ++NA    G +  A+++F+ M+  GC+P   TYN +++G+ N GK  +++ LL 
Sbjct: 300 VVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLD 359

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M ++  V+P+  TYN+L+R  C    I  A+ ++  M  +G+  D  TYN L  A  + 
Sbjct: 360 QM-RECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKT 418

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A  +   ++   +RPN  T   +++G CK G  + A  FL  M      P+   +
Sbjct: 419 GKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTY 478

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +  I+     K   G  + L  ++E     VKP  V ++ +++   +    G    I+  
Sbjct: 479 SPFIENLCKTK---GSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQ 535

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV  G  PD+  ++   + Y   G   +AE+++T M+K     + + + T+I G  +  +
Sbjct: 536 MVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQ 595

Query: 361 MQRAMSIYEKMCEIGINPNLKTY 383
             RA++I + M  +   PN  T+
Sbjct: 596 TDRAVTILKHMTGVASMPNHFTF 618



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 158/341 (46%), Gaps = 4/341 (1%)

Query: 102 YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
           + +L+  +         L+L   M +     P   TYN L+RA C +  +  A   +  M
Sbjct: 96  FRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLM 155

Query: 162 VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM 221
           V SG +PDA T+N+L   Y +  +   A  +  +M       +  +   ++ G+C+ G +
Sbjct: 156 VRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRI 215

Query: 222 EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
           ++A+     M +    P++    +L+KG  D    +     L  M+E G +P    ++ +
Sbjct: 216 DEALELFREMTQ----PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAAL 271

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +D W       + ++I ++M  +G+ P +   +I+   Y R G    A  +  SMR  G 
Sbjct: 272 VDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGC 331

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
            PNV  +  ++ G+CNA K+ +AM++ ++M E G+ P++ TY  L+ G         A  
Sbjct: 332 EPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFR 391

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           LL++ME  G+   + T  ++ D+    G   EA  +    E
Sbjct: 392 LLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLE 432



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 192/420 (45%), Gaps = 19/420 (4%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  I N + + G  P ++T T +V A  R+ R    + +   +   G +P+   +N
Sbjct: 280 KAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYN 339

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           A++     +G V +AM +  +M++ G +P   TYN LI+G    G    + +LL+LM + 
Sbjct: 340 AIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLM-EG 398

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
             +  +  TYN+L+ A C    ++EA ++   +   GI+P++VT+NT+     + G+   
Sbjct: 399 NGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDV 458

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A   L  M +    P+  T    +   CK    ++ + F+  M + +V P+ V +  +I 
Sbjct: 459 ACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVIN 518

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
              + ++     +    M   G  PDVVT++T + A+ + G + + + +  +M K     
Sbjct: 519 RLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIV 578

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF-----------------TTV 351
           D   ++ L  G+   G+  +A +IL  M      PN   F                    
Sbjct: 579 DAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKA 638

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
            S W   +++     ++E M +  +  + +TY ++L G+ E ++      L+ +M+E+ +
Sbjct: 639 TSVW-KTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENL 697



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 90/409 (22%), Positives = 177/409 (43%), Gaps = 17/409 (4%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           TY  L+ AL +  +     SL   +E  G++P+S+ FN +IN   ++G  D A    + M
Sbjct: 407 TYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENM 466

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
             +G  P T TY+  I+        +E L  +  M Q K+VKP+   Y I++    ++ +
Sbjct: 467 ISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQ-KDVKPSTVNYTIVINRLFNERN 525

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
              A  +  +MV+ G  PD VTY T  RAY   G    AE ++ EM+  +   +      
Sbjct: 526 YGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNT 585

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT------ 264
           ++ G+   G  + A+  L  M  +   PN   F  L++  L  + ++ V    T      
Sbjct: 586 LIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTI 645

Query: 265 ----------LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
                     LM++  V     T+ +I++ +S    + +   +   M +  +  +  +++
Sbjct: 646 ELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYN 705

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            L   + +      A ++L SM  +G  PN++ +  ++SG     +  RA  I+      
Sbjct: 706 ALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWK 765

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
             N +   ++ ++ G+          +++ ++E+   +P   T  ++ +
Sbjct: 766 EYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTE 814



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/360 (20%), Positives = 152/360 (42%), Gaps = 17/360 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK   A      +I  G+ P   TY+  +  L + K  +  L  I ++ +  +
Sbjct: 447 INGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDV 506

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP ++ +  +IN      N   A +I+ +M   GC P   TY T ++ Y N G+ +E+  
Sbjct: 507 KPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAEN 566

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY------- 173
           ++  M + + +  +   YN L+    S    + A  ++  M      P+  T+       
Sbjct: 567 VVTEMKKCRTIV-DAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHL 625

Query: 174 -------NTLARAYAQYGETYRAEQM-LFE-MQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
                  +   +A + +     A+   LFE M+ N V  + RT   I+ G+ +E  +++ 
Sbjct: 626 LQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEV 685

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
              +  MKE  +  N  ++N+L+  F  ++        L  M   G  P+++ +  ++  
Sbjct: 686 TSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSG 745

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
            ++ G   + +EIF          D  V+ ++  G++R G       +++ + +    P+
Sbjct: 746 LTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPS 805



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/287 (19%), Positives = 123/287 (42%), Gaps = 17/287 (5%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  I+  ++ +G  P ++TYTT V A   + R     +++++++K     D++ +N +I+
Sbjct: 529 ATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLID 588

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE---------------- 116
             +  G  D A+ I + M      P   T+  L++        E                
Sbjct: 589 GHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELA 648

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           +  +L +LM ++ +V  + RTY  ++  +  +  ++E  ++V  M    +  +   YN L
Sbjct: 649 DVFELFELMKKN-SVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNAL 707

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
              + +      A  +L  M  +   PN      ++SG   EG  + A       +  E 
Sbjct: 708 VNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEY 767

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD 283
           + + +V+  +I GF+    +D     ++++E+   KP   T++ + +
Sbjct: 768 NTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTE 814


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 205/432 (47%), Gaps = 2/432 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK   A   F+ +   G  P  +TYT+++  L +  R    + +  ++E++   P +  +
Sbjct: 145 GKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAY 204

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N MI     +G  DEA  + ++ +  GC P+   YN ++   G  GK +++L++ + M +
Sbjct: 205 NTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKR 264

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D    PN  TYNI++   C   ++E A+ V   M  +G+ P+  T N +     +  +  
Sbjct: 265 D--AMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLD 322

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +   M      P+  T   ++ G  K+G ++DA R   RM + +  PN+VV+ SLI
Sbjct: 323 EACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLI 382

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           + F      +   K    M   G  PD++  +T MD    AG   K + +F+++   G  
Sbjct: 383 RNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFL 442

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD   +SIL    V+AG  ++   +  +M+  G   +   + TVI G+C + K+ +A  +
Sbjct: 443 PDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQL 502

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
            E+M  +G +P + TY +++ G  +  +   A  L +  +  G+   +     + D +  
Sbjct: 503 LEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGK 562

Query: 428 IGLAREAKRVLK 439
           +G   EA  V++
Sbjct: 563 VGRVDEAYLVME 574



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/427 (24%), Positives = 207/427 (48%), Gaps = 8/427 (1%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +FN + E G+   +   TTL+   +R+ R  + LSL+ +++ +    D +L+N  I+   
Sbjct: 83  LFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFG 142

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G VD A K F +MK +G  P   TY +++       + +E++++ + M Q++ V P  
Sbjct: 143 KVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQV-PCA 201

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
             YN ++  + S    +EA++++ +  A G  P  V YN +     + G+T +A ++  E
Sbjct: 202 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEE 261

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M+ + + PN  T  II+   CK GN+E A +    MKE  + PN+   N +I     +  
Sbjct: 262 MKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMID---RLCK 317

Query: 256 SDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +  +D+A ++ E    K   PD  TF +++D     G +     I++ M+ A   P++ V
Sbjct: 318 AQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVV 377

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++ L + + +    +    +   M + G  P++++  T +     A + ++  +++E++ 
Sbjct: 378 YTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIK 437

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
             G  P+ ++Y  L+    +A       EL   M+++G          V D +   G   
Sbjct: 438 ARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVN 497

Query: 433 EAKRVLK 439
           +A ++L+
Sbjct: 498 KAYQLLE 504



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/494 (21%), Positives = 222/494 (44%), Gaps = 11/494 (2%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NI++G     G    A  + + + E G  P + T   ++  L + ++     S+   ++ 
Sbjct: 274 NIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDY 333

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
               PD   F ++I+   + G VD+A +I+++M D+   P    Y +LI+ +    + E+
Sbjct: 334 KVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKED 393

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
             K+ + M +     P+    N  +         E+   +  ++ A G  PD  +Y+ L 
Sbjct: 394 GHKMYKEMMR-SGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILI 452

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
            +  + G      ++ + M++     + R    ++ G+CK G +  A + L  MK +  H
Sbjct: 453 HSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHH 512

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKC 294
           P +V + S++ G   I   D +D+A  L EE    G++ + V +S+++D +   G + + 
Sbjct: 513 PTVVTYGSVVDGLAKI---DRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEA 569

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
             + ++M++ G+ P+++ ++ L  G V+A E  +A     SM+     PN + +  +I+G
Sbjct: 570 YLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILING 629

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C   K  +A   +++M + G+ PN  TY  ++ G  ++    +A  L +     G  P 
Sbjct: 630 LCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPD 689

Query: 415 KSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFL 474
            ++   + +       A +A ++ +       S+  K     ++++H+ + L  +     
Sbjct: 690 SASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQAAIVGA 749

Query: 475 QIPGVVSSEHNGSS 488
            +     S+H   S
Sbjct: 750 VLRETAKSQHAARS 763



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 168/357 (47%), Gaps = 8/357 (2%)

Query: 39  LTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPT 98
           + R + F  +  ++ ++   G  P +     ++ +C +S  + EA  + Q M+    +P 
Sbjct: 1   MVRTRNFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPA 60

Query: 99  TSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVV 158
            S Y TLI     VG+ +  L L   M Q+   + N      L+R +  +  ++ A +++
Sbjct: 61  FSAYTTLIGALSEVGESDRMLALFNQM-QELGYEVNVHLLTTLIRVFSREGRVDAALSLL 119

Query: 159 YKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
            +M ++    D V YN     + + G+   A +   EM+ N + P++ T   ++   CK 
Sbjct: 120 DEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKA 179

Query: 219 GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE---FGVKPDV 275
             +++A+    +M++    P    +N++I G+     +   D+A +L+E     G  P V
Sbjct: 180 NRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGY---GSAGKFDEAYSLLERQRAKGCIPSV 236

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           V ++ I+      G   K   IF++M +  + P++  ++I+     +AG  + A  +  +
Sbjct: 237 VAYNCILTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDA 295

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           M++ G+ PNV     +I   C A K+  A SI+E M     +P+  T+ +L+ G G+
Sbjct: 296 MKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGK 352



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 145/303 (47%), Gaps = 7/303 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ +   G+  +   +F  +   G  P   +Y+ L+ +L +    +    L   ++  G 
Sbjct: 417 MDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGC 476

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D+  +N +I+   +SG V++A ++ ++MK  G  PT  TY +++ G   + + +E+  
Sbjct: 477 VLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYM 536

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L +  ++   ++ N   Y+ L+  +     ++EA+ V+ +M+  G+ P+  T+N L    
Sbjct: 537 LFE-EAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGL 595

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  E   A      M++ +  PN+ T  I+++G CK      A  F   M++  + PN 
Sbjct: 596 VKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNT 655

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           + + ++I G   +  S  V +A +L E F   G  PD  +++ +++  S A       ++
Sbjct: 656 ITYTAMISG---LAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQL 712

Query: 298 FDD 300
           F++
Sbjct: 713 FEE 715



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 135/291 (46%), Gaps = 1/291 (0%)

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P + T   LV +      + EA++++  M     +P    Y TL  A ++ GE+ R   +
Sbjct: 24  PTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLAL 83

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             +MQ      N      ++  + +EG ++ A+  L  MK      ++V++N  I  F  
Sbjct: 84  FNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGK 143

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +   D   K    M+  G+ PD VT++++M     A  + +  EIF+ M +    P  + 
Sbjct: 144 VGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYA 203

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++ +  GY  AG+  +A S+L   R  G  P+VV +  +++      K  +A+ I+E+M 
Sbjct: 204 YNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMK 263

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
              + PNL TY  ++    +A     A ++   M+E G+ P   TI ++ D
Sbjct: 264 RDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMID 313



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 2/261 (0%)

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
           EQ+L EM      P   TC  +V+   K   + +A   L  M+  +  P    + +LI  
Sbjct: 11  EQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGA 70

Query: 250 FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
             ++ +SD +      M+E G + +V   +T++  +S  G +     + D+M     + D
Sbjct: 71  LSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDAD 130

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
           I ++++    + + G+   A      M+  G+ P+ V +T+++   C A ++  A+ I+E
Sbjct: 131 IVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFE 190

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           +M +    P    Y T++ GYG A +   A  LL+    KG  P       +       G
Sbjct: 191 QMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKG 250

Query: 430 LAREAKRVLKSAEEDRQSMPN 450
              +A R+ +  E  R +MPN
Sbjct: 251 KTDKALRIFE--EMKRDAMPN 269


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 202/434 (46%), Gaps = 36/434 (8%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  P+++T+TTL+    + KR +   +L   + + G+ PD +  +A+++     G   E
Sbjct: 253 DGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSE 312

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A  +F++M   G  P   TY T I     V +  ESL LL  M   + V  +   Y  ++
Sbjct: 313 AYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVS-RGVAMDLVMYTTVM 371

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
                +  IEEA +V+   ++  I P+ VTY  L  A+ + G    AEQML +M+   V 
Sbjct: 372 DRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVS 431

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF---------LDI 253
           PN  T   I++G  K G +  A  ++ +MK+  + PN+V + +LI GF         LD+
Sbjct: 432 PNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDV 491

Query: 254 -----------------------KDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSS 287
                                  + +  +++A  L   M E G+  D V ++T+MD    
Sbjct: 492 YRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFK 551

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
            G M    ++  ++++  + PD  V+++      R G+  +A+S L  MR  G+ P+   
Sbjct: 552 TGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQAT 611

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           + T+IS  C      +A+ +  +M    I PNL TY TL+ G  EA    +A+ LL  M 
Sbjct: 612 YNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMA 671

Query: 408 EKGVRPKKSTIQLV 421
             G  P   T + V
Sbjct: 672 SAGFTPTPLTYRRV 685



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/460 (25%), Positives = 205/460 (44%), Gaps = 36/460 (7%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L  +GK  EA  +    + +   P  +TYT LV A  R         ++ ++E+  +
Sbjct: 371 MDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSV 430

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + F++++N   + G + +A    +KMKDSG  P   TY TLI G+      E +L 
Sbjct: 431 SPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALD 490

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGI-------------- 166
           + + M  +  V+ N+   + LV       +IEEA  +   M   G+              
Sbjct: 491 VYRDMLHE-GVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGL 549

Query: 167 ---------------------QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                                 PDAV YN       + G+   A+  L EM+N  + P++
Sbjct: 550 FKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQ 609

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   ++S  C+EGN   A++ L  MK   + PNL+ + +L+ G L+    +     L  
Sbjct: 610 ATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNE 669

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M   G  P  +T+  ++ A S +       E+ + M+ AG+  DI V++ L       G 
Sbjct: 670 MASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGM 729

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            +KA  +L  M   G+ P+ + F  +I G C +  +  A + Y +M   G++PN+ T+ T
Sbjct: 730 TRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNT 789

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           LL G   A +   A+ ++  M++ G+ P   T  ++   +
Sbjct: 790 LLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGY 829



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 203/440 (46%), Gaps = 1/440 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G   EA  +F  + E G     + Y TL+  L +     + L +  ++ +  +
Sbjct: 511 VNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNL 570

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD++++N  IN     G   EA    ++M+++G +P  +TYNT+I      G   ++LK
Sbjct: 571 SPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALK 630

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M    ++KPN  TY  LV        +E+A  ++ +M ++G  P  +TY  + +A 
Sbjct: 631 LLNEMKWS-SIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQAC 689

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           +     Y   ++   M    +  +      +V   C  G    A   L  M    + P+ 
Sbjct: 690 SGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDT 749

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + FN+LI G       D        M   G+ P++ TF+T++    SAG +G+   +  +
Sbjct: 750 ITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICE 809

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M K G+EP+   + IL  GY +     +A  +   M   G  P    + ++IS +  A  
Sbjct: 810 MKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGM 869

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M +A  ++ +M   G+     TY+ LL G+ + +       LL+ M+E G +P K TI  
Sbjct: 870 MNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISS 929

Query: 421 VADSWRAIGLAREAKRVLKS 440
           ++ ++   G+  EA+R+LK+
Sbjct: 930 MSRAFSKPGMTWEARRLLKT 949



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/482 (23%), Positives = 227/482 (47%), Gaps = 44/482 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N LV +G   +A      + + G  P ++TY TL+    + +  ++ L +   +  +G+
Sbjct: 441 LNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGV 500

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + ++ + ++++N   ++GN++EA  +F+ M + G       Y TL+ G    G    +LK
Sbjct: 501 EANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALK 560

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + Q +  ++N+ P+   YN+ +   C      EA + + +M  +G++PD  TYNT+  A 
Sbjct: 561 VGQEL-MERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQ 619

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE------- 233
            + G T +A ++L EM+ + ++PN  T   +V G  + G +E A   L  M         
Sbjct: 620 CREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTP 679

Query: 234 -------------------LEVH---------PNLVVFNSLIKGFLDIKDSDGVD-KALT 264
                              LEVH          ++ V+N+L+     +    G+  KA  
Sbjct: 680 LTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVH----VLCCHGMTRKATI 735

Query: 265 LMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           +++E    G+ PD +TF+ ++     +  +      +  M+  G+ P+I  F+ L  G  
Sbjct: 736 VLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLE 795

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
            AG   +A++++  M+K G+ PN + +  +++G+        A+ +Y +M   G  P   
Sbjct: 796 SAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKAS 855

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY +L+  + +A    +A+EL   M+ +GV    ST  ++ + W  +    E + +LK  
Sbjct: 856 TYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDM 915

Query: 442 EE 443
           +E
Sbjct: 916 KE 917



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/387 (24%), Positives = 175/387 (45%), Gaps = 1/387 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L+E    P  + Y   +  L R  +F    S + ++   G++PD   +N MI+A    GN
Sbjct: 565 LMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGN 624

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             +A+K+  +MK S  KP   TY TL+ G    G  E++  LL  M+      P   TY 
Sbjct: 625 TSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMAS-AGFTPTPLTYR 683

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            +++A     S      V   M+ +G+  D   YNTL      +G T +A  +L EM   
Sbjct: 684 RVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGR 743

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            + P+  T   ++ G+CK  ++++A     +M    + PN+  FN+L+ G          
Sbjct: 744 GIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEA 803

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
           D  +  M++ G++P+ +T+  ++  ++      +   ++ +MV  G  P    ++ L   
Sbjct: 804 DTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISD 863

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           + +AG   +A+ + + M++ GV      +  +++GW           + + M E+G  P+
Sbjct: 864 FAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPS 923

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVM 406
             T  ++   + +    W A  LL+ +
Sbjct: 924 KGTISSMSRAFSKPGMTWEARRLLKTL 950



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/431 (22%), Positives = 193/431 (44%), Gaps = 1/431 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA+ +F  + + G  P  +TY T + +L + +R    L L+ ++   G+  D +++
Sbjct: 308 GRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMY 367

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +++   + G ++EA  + +        P   TY  L+  +   G  + + ++L L  +
Sbjct: 368 TTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQML-LQME 426

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +K+V PN  T++ ++     +  I +A   + KM  SGI P+ VTY TL   + +     
Sbjct: 427 EKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQE 486

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +  +M +  V  N      +V+G  K GN+E+A      M E  +  + V + +L+
Sbjct: 487 AALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLM 546

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G     +     K    + E  + PD V ++  ++     G   + +    +M   G+E
Sbjct: 547 DGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLE 606

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD   ++ +     R G   KA  +L  M+   + PN++ +TT++ G   A  +++A  +
Sbjct: 607 PDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYL 666

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
             +M   G  P   TY  +L     ++ P+   E+ ++M   G+    +    +      
Sbjct: 667 LNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCC 726

Query: 428 IGLAREAKRVL 438
            G+ R+A  VL
Sbjct: 727 HGMTRKATIVL 737



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 107/445 (24%), Positives = 205/445 (46%), Gaps = 9/445 (2%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           ++Y   +A L+ Q   +    ++S++ K G+  D +  +  +   S +G V EA  + + 
Sbjct: 118 VSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEM 177

Query: 90  M-KDSGCKPTTST-YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
           + +  G        +N LI GY  V     +L +++ M+  + +  +   YN LV  +  
Sbjct: 178 LVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTT-QGLSLDVVGYNTLVAGFFY 236

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
               + AW V  +M A G++P  VT+ TL   Y +      A  +   M  + V P+  T
Sbjct: 237 SGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVT 296

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
              +V G C++G   +A      M ++ V PN V + + I     ++    V+++L L+ 
Sbjct: 297 LSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQR---VNESLGLLG 353

Query: 268 EF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
           E    GV  D+V ++T+MD     G + + +++    +   I P+   +++L   + RAG
Sbjct: 354 EMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAG 413

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
               AE +L  M +  V PNVV F+++++G      + +A     KM + GI PN+ TY 
Sbjct: 414 NIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYG 473

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           TL+ G+ + +    A ++ + M  +GV      +  + +  R  G   EA+ + K   E 
Sbjct: 474 TLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGER 533

Query: 445 RQSMPNKKDEIAVESIHRKQNLSAS 469
              + +      ++ + +  N+ A+
Sbjct: 534 GLLLDHVNYATLMDGLFKTGNMPAA 558



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/411 (23%), Positives = 187/411 (45%), Gaps = 1/411 (0%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
           ++ +  L+    + +   + L+++ ++   G+  D + +N ++     SG+ D A ++ +
Sbjct: 189 VVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAE 248

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
           +MK  G +P+  T+ TLI  Y  + + EE+  L + M +   V P+  T + LV   C  
Sbjct: 249 RMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRS-GVLPDVVTLSALVDGLCRD 307

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
               EA+ +  +M   G+ P+ VTY T   + A+      +  +L EM +  V  +    
Sbjct: 308 GRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMY 367

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             ++    KEG +E+A   L       + PN V +  L+       + DG ++ L  MEE
Sbjct: 368 TTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEE 427

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
             V P+VVTFS+I++     G + K       M  +GI P++  +  L  G+ +    + 
Sbjct: 428 KSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEA 487

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  +   M   GV  N  +  ++++G      ++ A ++++ M E G+  +   Y TL+ 
Sbjct: 488 ALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMD 547

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           G  +      A ++ Q + E+ + P      +  +    +G   EAK  LK
Sbjct: 548 GLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLK 598



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 144/313 (46%), Gaps = 1/313 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P LITYTTLV  L      +    L++++   G  P  + +  ++ ACS S +    ++
Sbjct: 641 KPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILE 700

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           + + M  +G     + YNTL+      G   ++  +L  M   + + P+  T+N L+   
Sbjct: 701 VHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEM-LGRGIAPDTITFNALILGH 759

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C  + ++ A+    +M+  G+ P+  T+NTL       G    A+ ++ EM+   + PN 
Sbjct: 760 CKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNN 819

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T  I+V+GY K+ N  +A+R    M      P    +NSLI  F      +   +  + 
Sbjct: 820 LTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSE 879

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M+  GV     T+  +++ WS      + + +  DM + G +P     S +++ + + G 
Sbjct: 880 MKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGM 939

Query: 326 PQKAESILTSMRK 338
             +A  +L ++ K
Sbjct: 940 TWEARRLLKTLFK 952


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/425 (30%), Positives = 209/425 (49%), Gaps = 15/425 (3%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           HE   + + ++  G  P  ITY  L+  L R  +      L++KV      P+ + F  +
Sbjct: 295 HEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT----PNDVHFTIL 350

Query: 71  INACSESGNVDEAMK-IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK 129
           IN   +SG +DEA   ++ KM  +GC+P   T+NTLI G    G    ++ ++  MS + 
Sbjct: 351 INGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSAN- 409

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
              PN  TY  L+  +C KN +EEA  V+ +M A G + + + YN L RA  + G+  +A
Sbjct: 410 GCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKA 469

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHPNLVVFNSLIK 248
             ML EM +   +P+  T   ++ G CK    EDA+  LYR   L+ V  N V +N+LI 
Sbjct: 470 LDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALA-LYRDMLLDGVIANTVTYNTLIH 528

Query: 249 GFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
            FL       + +AL L+ +    G   D +T++ ++ A+   G   K   +FD+MV+  
Sbjct: 529 AFLR---GGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKD 585

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + P     ++L  G  R G+   A  +L  M   G+ P+VV + ++I+G C    ++ A 
Sbjct: 586 LVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAF 645

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST-IQLVADS 424
           +++ K+   GI P+  TY TL+  +  A     A  LL    E    P   T   LV++ 
Sbjct: 646 NLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNF 705

Query: 425 WRAIG 429
            + IG
Sbjct: 706 IKEIG 710



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/469 (24%), Positives = 213/469 (45%), Gaps = 39/469 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ILV    P  A  +F  ++ +G  PT+ T+  ++ AL       +  SL+  + K G 
Sbjct: 180 LDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGC 239

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+S+++  +I+A S+   V+EA+K+ ++M   GC P   T+N +I G   + +  E  K
Sbjct: 240 VPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAK 299

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW---------NVVY------------ 159
           L+  M   +   PND TY +L+   C    ++EA          N V+            
Sbjct: 300 LVDRMLF-RGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKSG 358

Query: 160 -----------KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
                      KM+ +G +PD  T+NTL     + G    A  M+ +M  N   PN  T 
Sbjct: 359 RLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITY 418

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             ++ G+CK+  +E+A   L  M       N++ +N L++    +  +  V KAL ++ E
Sbjct: 419 TTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRA---LCKNGKVPKALDMLGE 475

Query: 269 F---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
               G KPD+ TF+T++              ++ DM+  G+  +   ++ L   ++R G 
Sbjct: 476 MSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGA 535

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            Q+A  ++  M   G   + + +  +I  +C     ++A+ ++++M    + P+  +   
Sbjct: 536 IQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNL 595

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           L+ G     +   A ELL+ M  +G+ P   T   + +    +G  REA
Sbjct: 596 LINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREA 644



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 100/409 (24%), Positives = 183/409 (44%), Gaps = 6/409 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT  +Y  ++  L          ++  ++   G+ P    F  ++ A      VD A  +
Sbjct: 171 PTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSL 230

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            + M   GC P +  Y TLI       +  E+LKLL+ M       P+  T+N ++   C
Sbjct: 231 LRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFL-MGCLPDVDTFNDVIYGLC 289

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
             N I E   +V +M+  G  P+ +TY  L     + G+   A+ +L    N    PN+ 
Sbjct: 290 RLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLL----NKVPTPNDV 345

Query: 207 TCGIIVSGYCKEGNMEDAMRFLY-RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
              I+++GY K G +++A  FLY +M +    P++  FN+LI G             +  
Sbjct: 346 HFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVND 405

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M   G  P+++T++T++D +     + +   + ++M   G E +I  +++L +   + G+
Sbjct: 406 MSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGK 465

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             KA  +L  M   G  P++  F T+I G C   + + A+++Y  M   G+  N  TY T
Sbjct: 466 VPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNT 525

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           L+  +        A +L+  M  +G    + T   +  ++  +G   +A
Sbjct: 526 LIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKA 574



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 163/319 (51%), Gaps = 1/319 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  KG    A  + N +   G  P LITYTTL+    ++ + +    +++++   G + +
Sbjct: 390 LCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELN 449

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N ++ A  ++G V +A+ +  +M D GCKP   T+NTLI G   V + E++L L +
Sbjct: 450 IMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYR 509

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D  V  N  TYN L+ A+    +I+EA  +V  M+  G   D +TYN L +A+ + 
Sbjct: 510 DMLLD-GVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKL 568

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G T +A  +  EM    + P+  +C ++++G C+ G + +A+  L  M    + P++V +
Sbjct: 569 GATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTY 628

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           NSLI G   + +          ++  G++PD +T++T++     AG+      +    V+
Sbjct: 629 NSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVE 688

Query: 304 AGIEPDIHVFSILAKGYVR 322
               P+   + IL   +++
Sbjct: 689 NAFIPNDVTWYILVSNFIK 707



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 177/368 (48%), Gaps = 2/368 (0%)

Query: 1   MNILVGKGKPHEAH-YIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG 59
           +N  V  G+  EA+ ++++ +I+ G RP + T+ TL+  L ++    S + +++ +  +G
Sbjct: 351 INGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANG 410

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
             P+ I +  +++   +   ++EA  +  +M   G +     YN L++     GK  ++L
Sbjct: 411 CTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKAL 470

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            +L  MS DK  KP+  T+N L+   C  +  E+A  +   M+  G+  + VTYNTL  A
Sbjct: 471 DMLGEMS-DKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHA 529

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + + G    A +++ +M       +E T   ++  +CK G  E A+     M   ++ P+
Sbjct: 530 FLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPS 589

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            +  N LI G   +       + L  M   G+ PDVVT++++++     G + +   +F+
Sbjct: 590 NISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFN 649

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            +   GI+PD   ++ L   + RAG    A  +L    +    PN V +  ++S +   +
Sbjct: 650 KLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEI 709

Query: 360 KMQRAMSI 367
             +  +S 
Sbjct: 710 GKENGISF 717



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 149/327 (45%), Gaps = 5/327 (1%)

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
           K+  ++K+ G     S +  ++K YG    P ++ ++L  M      +P  ++YN+++  
Sbjct: 123 KLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDI 182

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
             S N    A NV Y+M++ G+ P   T+  + +A     E   A  +L +M  +   PN
Sbjct: 183 LVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPN 242

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
                 ++    K   + +A++ L  M  +   P++  FN +I G   +       K + 
Sbjct: 243 SVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVD 302

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M   G  P+ +T+  +M+     G + + Q + +   K     D+H F+IL  GYV++G
Sbjct: 303 RMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLN---KVPTPNDVH-FTILINGYVKSG 358

Query: 325 EPQKAESIL-TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
              +A + L   M K G  P+V  F T+I G C    M  A+ +   M   G  PNL TY
Sbjct: 359 RLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITY 418

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKG 410
            TLL G+ +  Q   A  +L  M  KG
Sbjct: 419 TTLLDGFCKKNQLEEAGYVLNEMSAKG 445



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 80/170 (47%)

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
           +  +P   +++ ++D   SA        +F +M+  G+ P ++ F ++ K      E   
Sbjct: 167 YCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDN 226

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A S+L  M K+G  PN V++ T+I       ++  A+ + E+M  +G  P++ T+  +++
Sbjct: 227 ACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIY 286

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           G     +     +L+  M  +G  P   T  ++ +    +G   EA+ +L
Sbjct: 287 GLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLL 336


>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
 gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
          Length = 410

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 194/383 (50%), Gaps = 8/383 (2%)

Query: 46  KSILSLISKVEKDG-MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNT 104
           +S L+++++  K G    D     A+++ C +SG+V EA ++F  M   G  P   TY  
Sbjct: 19  RSALAVLARGTKSGDAALDVAACTALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTA 78

Query: 105 LIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS 164
           LI GY   G+ E    L+  M +   V+PN  TYN LV  WC     + A  +  +M   
Sbjct: 79  LIHGYFVRGQREMGFALVGEMRRG-GVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLK 137

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           G+  + V+YN L     ++G+   A Q+   M+   + P+  T  +++ GY K G M +A
Sbjct: 138 GVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNA 197

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
           + F  +MK   + P++V +N LI GF   +D     +A + M+E  + P  VT++ ++ A
Sbjct: 198 LHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGA 257

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           ++    M +  E+  +M KAG+E D+  + +L       G+   A  +  SM   GV PN
Sbjct: 258 FAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPN 317

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET---LLWGYGEAKQPWRAEE 401
            V++  +I G+       +A+ +  +M + G+ PN+ +Y     LL   G+ ++   AE 
Sbjct: 318 NVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQE---AEA 374

Query: 402 LLQVMEEKGVRPKKSTIQLVADS 424
           L+  ME+ G++  +S  +++ D+
Sbjct: 375 LIGDMEDAGLQTSESICRVLFDA 397



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 138/302 (45%), Gaps = 7/302 (2%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P L TY  LV    R   FKS   L  ++   G+  + + +N +I      G + +A
Sbjct: 103 GVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDA 162

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            ++F+ M+  G  P+  T+N LI GYG  GK   +L     M +   ++P+  TYN L+ 
Sbjct: 163 AQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQM-KAAGLQPSVVTYNELIG 221

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +C    I  A      M    + P  VTY  L  A+A+  E  RA +ML EM+   +  
Sbjct: 222 GFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEV 281

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           + ++ G+++   C EG M  A +    M    V PN V+++ +I G+     S    + +
Sbjct: 282 DVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLI 341

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE---IFDDMVKAGIEPDIHVFSILAKGY 320
             M + G+ P+V ++   +    +    GKCQE   +  DM  AG++    +  +L    
Sbjct: 342 MEMRKSGLIPNVASYCLTIRLLCNE---GKCQEAEALIGDMEDAGLQTSESICRVLFDAK 398

Query: 321 VR 322
            R
Sbjct: 399 AR 400



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 141/287 (49%), Gaps = 5/287 (1%)

Query: 2   NILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N LVG+    G+   A  +F+ +  +G    +++Y  L+A L R  + K    L   + +
Sbjct: 112 NCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRR 171

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
           +G+ P  + FN +I+   ++G +  A+  F +MK +G +P+  TYN LI G+        
Sbjct: 172 EGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAH 231

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +++    M +++ + P   TY IL+ A+  +N ++ A+ ++ +M  +G++ D  +Y  L 
Sbjct: 232 AIRAFSDM-KERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLL 290

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
            A    G+   A ++   M +  V+PN     +++ GY +EG+   A+R +  M++  + 
Sbjct: 291 HALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLI 350

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
           PN+  +   I+   +       +  +  ME+ G++        + DA
Sbjct: 351 PNVASYCLTIRLLCNEGKCQEAEALIGDMEDAGLQTSESICRVLFDA 397



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 138/301 (45%), Gaps = 6/301 (1%)

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           LV   C    + EA  V   M   G+ P+ VTY  L   Y   G+      ++ EM+   
Sbjct: 44  LVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFALVGEMRRGG 103

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL---DIKDSD 257
           V PN  T   +V  +C+ G  + A      M    V  N+V +N LI G      +KD+ 
Sbjct: 104 VEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAA 163

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
            + +A   M   G+ P +VTF+ ++D +  AG M      F+ M  AG++P +  ++ L 
Sbjct: 164 QLFEA---MRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELI 220

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            G+ RA +   A    + M++  + P  V +T +I  +    +M RA  +  +M + G+ 
Sbjct: 221 GGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLE 280

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
            ++++Y  LL       +   A +L Q M+ KGV+P      ++   +   G + +A R+
Sbjct: 281 VDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRL 340

Query: 438 L 438
           +
Sbjct: 341 I 341



 Score = 39.3 bits (90), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 24/106 (22%), Positives = 45/106 (42%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +GK   A  +F  +  +G +P  + Y  ++    R+      L LI ++ K G+
Sbjct: 290 LHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGL 349

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLI 106
            P+   +   I      G   EA  +   M+D+G + + S    L 
Sbjct: 350 IPNVASYCLTIRLLCNEGKCQEAEALIGDMEDAGLQTSESICRVLF 395


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 211/447 (47%), Gaps = 26/447 (5%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P ++TY  L+    R+++      ++S +  +G  P   +FN++I+A   SG+   A K+
Sbjct: 332 PNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKL 391

Query: 87  FQKMKDSGCKPTTSTYNTLIKGY-GNVGKPEESLKLLQLMSQ------DKNVKPNDRTYN 139
            +KM D GC+P    YN LI G  GN   P  SL +L+L  +      D +V  N    +
Sbjct: 392 LKKMGDCGCQPGYVVYNILIGGICGNEKLP--SLDVLELAEKAYGEMLDAHVVLNKVNVS 449

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L R  C     E+A++++ +M++ G  PD  TY+ +        +   A  +  EM++N
Sbjct: 450 NLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSN 509

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            V P+  T  I++  +CK G ++ A ++   M      PN+V + +LI  +L  +     
Sbjct: 510 HVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSA 569

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV-KAGI------------ 306
           ++   +M   G  P+VVT++ ++D    +G + K  +I+  M   A I            
Sbjct: 570 NELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629

Query: 307 ---EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
              +P+I  +  L  G  +A + ++A  +L  M   G  PN +++  +I G+C   K+  
Sbjct: 630 NIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDE 689

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  ++ KM E G  PN+ TY +L+    + K+   A ++L  M E    P       + D
Sbjct: 690 AQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMID 749

Query: 424 SWRAIGLAREAKRVLKSAEEDRQSMPN 450
               +G   EA R++ S  E++   PN
Sbjct: 750 GLCKVGKTDEAYRLM-SMMEEKGCHPN 775



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 199/445 (44%), Gaps = 33/445 (7%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           T    V  L +  R++  L+LI   EK+  K D++++  MI+   E+   +EAM    +M
Sbjct: 269 TLGCFVHLLCKAGRWREALALI---EKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRM 325

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
           + S C P   TY  L+ G     +     ++L +M  +    P+ R +N L+ A+C    
Sbjct: 326 RSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITE-GCYPSRRIFNSLIHAYCRSGD 384

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYA------QYGETYRAEQMLFEMQNNQVRPN 204
              A+ ++ KM   G QP  V YN L                  AE+   EM +  V  N
Sbjct: 385 YSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLN 444

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
           +     +    C  G  E A   +  M      P+   ++ +I G L   ++  VD A  
Sbjct: 445 KVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVI-GLL--CNASKVDNAFL 501

Query: 265 LMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           L EE     V PDV T++ ++D++   GL+ + ++ FD+MV+ G  P++  ++ L   Y+
Sbjct: 502 LFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYL 561

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM------CEIG 375
           +A +   A  +   M   G  PNVV +T +I G C + ++++A  IY +M       ++ 
Sbjct: 562 KARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVD 621

Query: 376 I----------NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           +          +PN+ TY  L+ G  +A +   A +LL VM  +G  P       + D +
Sbjct: 622 MYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGF 681

Query: 426 RAIGLAREAKRVLKSAEEDRQSMPN 450
             +G   EA+ V     E R   PN
Sbjct: 682 CKVGKLDEAQMVFTKMSE-RGYGPN 705



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 185/406 (45%), Gaps = 22/406 (5%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G GK  +A+ I   ++ +G  P   TY+ ++  L    +  +   L  +++ + + PD
Sbjct: 455 LCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPD 514

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +  +I++  + G + +A K F +M   GC P   TY  LI  Y    K   + +L +
Sbjct: 515 VFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFE 574

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           +M  +  + PN  TY  L+   C    IE+A  +  +M  +   PD              
Sbjct: 575 MMLSEGCI-PNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDV------------- 620

Query: 184 GETYRAEQMLFEMQNNQVR-PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                   M F++ +  +R PN  T G +V G CK   +++A   L  M      PN +V
Sbjct: 621 -------DMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIV 673

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +++LI GF  +   D      T M E G  P+V T+S+++D       +    ++   M+
Sbjct: 674 YDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRML 733

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           +    P++ +++ +  G  + G+  +A  +++ M + G HPNVV +T +I G+  A K+ 
Sbjct: 734 ENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVD 793

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           + + +  +M   G  PN  TY  L+     A     A +LL  M++
Sbjct: 794 KCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQ 839



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/485 (23%), Positives = 211/485 (43%), Gaps = 58/485 (11%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA-C 74
           I + +I EG  P+   + +L+ A  R   +     L+ K+   G +P  +++N +I   C
Sbjct: 356 ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC 415

Query: 75  SE----------------------------------------SGNVDEAMKIFQKMKDSG 94
                                                     +G  ++A  I ++M   G
Sbjct: 416 GNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKG 475

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
             P TSTY+ +I    N  K + +  L + M  + +V P+  TY IL+ ++C    +++A
Sbjct: 476 FIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSN-HVVPDVFTYTILIDSFCKVGLLQQA 534

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
                +MV  G  P+ VTY  L  AY +  +   A ++   M +    PN  T   ++ G
Sbjct: 535 RKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDG 594

Query: 215 YCKEGNMEDAMRFLYRMK------ELEVH----------PNLVVFNSLIKGFLDIKDSDG 258
           +CK G +E A +   RM+      +++++          PN+  + +L+ G         
Sbjct: 595 HCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKE 654

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
               L +M   G +P+ + +  ++D +   G + + Q +F  M + G  P+++ +S L  
Sbjct: 655 ARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
              +      A  +L+ M +    PNV+++T +I G C   K   A  +   M E G +P
Sbjct: 715 RLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP 774

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           N+ TY  ++ G+G+A +  +  EL++ M  KG  P   T +++ +   A GL  +A ++L
Sbjct: 775 NVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834

Query: 439 KSAEE 443
              ++
Sbjct: 835 DEMKQ 839



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/421 (23%), Positives = 193/421 (45%), Gaps = 17/421 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L    K   A  +F  +      P + TYT L+ +  +    +       ++ +DG 
Sbjct: 487 IGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGC 546

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + + A+I+A  ++  +  A ++F+ M   GC P   TY  LI G+   G+ E++ +
Sbjct: 547 APNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQ 606

Query: 121 LLQLMS--------------QDKNVK-PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
           +   M                D N++ PN  TY  LV   C  + ++EA +++  M   G
Sbjct: 607 IYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEG 666

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
            +P+ + Y+ L   + + G+   A+ +  +M      PN  T   ++    K+  ++ A+
Sbjct: 667 CEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLAL 726

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           + L RM E    PN++++  +I G   +  +D   + +++MEE G  P+VVT++ ++D +
Sbjct: 727 KVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGF 786

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
             AG + KC E+   M   G  P+   + +L      AG    A  +L  M++     ++
Sbjct: 787 GKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHM 846

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
             +  VI G+     +  ++ + +++ E    P +  Y  L+  + +A +   A EL + 
Sbjct: 847 AGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKE 904

Query: 406 M 406
           M
Sbjct: 905 M 905



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/346 (22%), Positives = 160/346 (46%), Gaps = 38/346 (10%)

Query: 21  IEEGH--RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESG 78
           I++G+   P + TY  LV  L +  + K    L+  +  +G +P+ I+++A+I+   + G
Sbjct: 626 IDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVG 685

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
            +DEA  +F KM + G  P   TY++LI       + + +LK+L  M ++ +  PN   Y
Sbjct: 686 KLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN-SCAPNVIIY 744

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
             ++   C     +EA+ ++  M   G  P+ VTY  +   + + G+  +  +++ +M  
Sbjct: 745 TEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGA 804

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF-------L 251
               PN  T  ++++  C  G ++DA + L  MK+     ++  +  +I+GF       L
Sbjct: 805 KGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISL 864

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVT----------------------------FSTIMD 283
            + D    + A+ ++  + +  D                               +S++++
Sbjct: 865 GLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIE 924

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           + S A  + K  E++ DM+K G  P++ +F  L KG +R    ++A
Sbjct: 925 SLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEA 970



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/439 (22%), Positives = 175/439 (39%), Gaps = 67/439 (15%)

Query: 98  TTSTYNTLIKGYGNVGK---PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
           T   Y+ L++  G  G    PE+ L+  ++  +DK +    +  N+L+R  C +N +   
Sbjct: 161 TGPVYHALLEVLGCGGNDRVPEQFLR--EIRDEDKEIL--GKLLNVLIRK-CCRNGL--- 212

Query: 155 WNVVYKMVAS----GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           WNV  + +      G +P  +TYN L R + +      A  +  EM ++    +  T G 
Sbjct: 213 WNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGC 272

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
            V   CK G   +A+  +   ++ E   + V++  +I G  +    +     L+ M    
Sbjct: 273 FVHLLCKAGRWREALALI---EKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSS 329

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
             P+VVT+  ++        +G+C+ I   M+  G  P   +F+ L   Y R+G+   A 
Sbjct: 330 CIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAY 389

Query: 331 SILTSMRKYGVHPNVVMFTTVISG------------------------------------ 354
            +L  M   G  P  V++  +I G                                    
Sbjct: 390 KLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVS 449

Query: 355 -----WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
                 C A K ++A SI  +M   G  P+  TY  ++     A +   A  L + M+  
Sbjct: 450 NLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSN 509

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIA-VESIHRKQNLSA 468
            V P   T  ++ DS+  +GL ++A++       D    PN     A + +  + + +S+
Sbjct: 510 HVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD-GCAPNVVTYTALIHAYLKARKMSS 568

Query: 469 SNSTFLQ------IPGVVS 481
           +N  F        IP VV+
Sbjct: 569 ANELFEMMLSEGCIPNVVT 587


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 206/427 (48%), Gaps = 42/427 (9%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +I++  +P   T+  L+  L R  + +    L+ ++++ G  PD  ++NA+I+  S++ +
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             +A K   +M  + C PT  TY  ++ G    G+ ++++KLL  M +DK   PN  TYN
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEM-RDKGCSPNIYTYN 119

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT-----------------LAR---- 178
           ++V   C +  ++EA  ++ +M   G  PD VTYN+                 LAR    
Sbjct: 120 VIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT 179

Query: 179 -----------AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
                         + G+   A +ML +M N    P+  T   ++ G+CK G +E AM  
Sbjct: 180 PDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGL 239

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
           L  M +L   PN+V +NSL+     +      +  L  ME  G  PDVV+++  +D    
Sbjct: 240 LDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCK 299

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
           A  + K + +FD MV+ G  P+   +S+L +   +  E   A +++   R+     ++++
Sbjct: 300 AERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILL 359

Query: 348 FTTVISGWCNAVKMQRAMSIY-----EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           +T ++ G C   +   A +++     EK+CE    P++  Y  +L  + + +Q  +A ++
Sbjct: 360 YTVLLDGLCKGGRFDEACALFSKVLDEKICE----PDVFFYNVMLDSHCKRRQIDKALQI 415

Query: 403 LQVMEEK 409
            + M E+
Sbjct: 416 HKQMLER 422



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 165/341 (48%), Gaps = 5/341 (1%)

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           DK+ +P+  T+ IL+R  C  N +E+A  ++ +M   G  PD   YN L   Y++  +  
Sbjct: 3   DKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFG 62

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A + L EM  N   P   T   IV G CK G  +DA++ L  M++    PN+  +N ++
Sbjct: 63  QAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIV 122

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           +G  + +  D   K L  M   G  PDVVT+++ +        + + ++    + +  + 
Sbjct: 123 EGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF---LARMPVT 179

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+  ++ +  G  ++G+   A  +L  M   G  P+VV ++++I G+C   +++RAM +
Sbjct: 180 PDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGL 239

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
            + M ++G  PN+  Y +LL          +AE++L  ME +G  P   +     D    
Sbjct: 240 LDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCK 299

Query: 428 IGLAREAKRVLKSAEEDRQSMPNKKD-EIAVESIHRKQNLS 467
               ++AK V     E R   PN     + VE + +K+ L 
Sbjct: 300 AERVKKAKAVFDRMVE-RGCTPNASSYSMLVEELCKKKELD 339



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/435 (23%), Positives = 196/435 (45%), Gaps = 12/435 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  +A  + + + ++G  P + TY  +V  L  +++      ++ ++   G  PD
Sbjct: 90  LCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 149

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N+ I    +   VDEA K   +M  +   P   +Y T+I G    G  + + ++L 
Sbjct: 150 VVTYNSFIKGLCKCDRVDEARKFLARMPVT---PDVVSYTTVINGLCKSGDLDSASRMLD 206

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M+ ++   P+  TY+ L+  +C    +E A  ++  M+  G +P+ V YN+L  A  + 
Sbjct: 207 QMT-NRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 265

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G   +AE ML EM+     P+  +    + G CK   ++ A     RM E    PN   +
Sbjct: 266 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 325

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + L++     K+   +D A+TL+E+   K    D++ ++ ++D     G   +   +F  
Sbjct: 326 SMLVEELCKKKE---LDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSK 382

Query: 301 MVKAGI-EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           ++   I EPD+  ++++   + +  +  KA  I   M +     NVV +  ++ G C   
Sbjct: 383 VLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDD 441

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           ++  A ++   M + G  P+  TY TL+    +  +   A EL +   + G  P   T  
Sbjct: 442 RLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYS 501

Query: 420 LVADSWRAIGLAREA 434
            +        +A EA
Sbjct: 502 ALITGLVHENMAEEA 516



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/439 (22%), Positives = 196/439 (44%), Gaps = 48/439 (10%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+   A  + + +++ G RP ++ Y +L+ AL R         ++ ++E+ G  PD + +
Sbjct: 231 GEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSY 290

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           NA I+   ++  V +A  +F +M + GC P  S+Y+ L++      + ++++ L++  ++
Sbjct: 291 NACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVE-QAR 349

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGI-QPDAVTYNTLARAYAQYGET 186
           +K    +   Y +L+   C     +EA  +  K++   I +PD   YN +  ++ +  + 
Sbjct: 350 EKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQI 409

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A Q+  +M        ER C                              N+V +N L
Sbjct: 410 DKALQIHKQML-------ERNC-----------------------------CNVVTWNIL 433

Query: 247 IKGF-LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           + G  +D + SD     LT+++E G  PD VT+ T++DA    G      E+F++ VK G
Sbjct: 434 VHGLCVDDRLSDAETMLLTMVDE-GFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGG 492

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
             PD+  +S L  G V     ++A  + T +       +V ++  +I G+         +
Sbjct: 493 CVPDVVTYSALITGLVHENMAEEAYLLFTKL-------DVALWNAMILGYAENGSGDLGL 545

Query: 366 SIYEKMCEIGINPNLKTYETLLWG-YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
            ++ ++ E  + PN +T+   + G   +A+   +A  L     + G  P       + D 
Sbjct: 546 KLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDV 605

Query: 425 WRAIGLAREAKRVLKSAEE 443
           +   G   EA+R+  S ++
Sbjct: 606 FAKCGDLEEARRIFYSMKQ 624



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 127/279 (45%), Gaps = 32/279 (11%)

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M +   +P+  T  I++ G C+   +E A + L RMKE+   P+  ++N+LI G+   KD
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
                K L  M +    P VVT++ I+D    AG      ++ D+M   G  P+I+ +++
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 316 LAKGYVRAGEPQKAESILTSM----------------------------RKY----GVHP 343
           + +G     +  +A+ +L  M                            RK+     V P
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTP 180

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           +VV +TTVI+G C +  +  A  + ++M   G  P++ TY +L+ G+ +  +  RA  LL
Sbjct: 181 DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 240

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
             M + G RP       +  +   +G   +A+ +L   E
Sbjct: 241 DSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEME 279


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 191/401 (47%), Gaps = 1/401 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  PT++TY  ++  L R+     I SL+ ++++ G+ P+  ++N +I A  +  +  +
Sbjct: 340 KGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQ 399

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+ +  +M  S   P   T+NTLI  +   G  EE+LKLL+  +  + ++PN  +Y  L+
Sbjct: 400 ALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLR-EAIRRELEPNQLSYTPLI 458

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
             +C +  +  A +++ +M+  G  PD VT   L       G+   A  +  +M   QV 
Sbjct: 459 HGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVM 518

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+     +++SG CK+  +  A   L  M E +V P+  V+ +LI GF+         K 
Sbjct: 519 PDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKI 578

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              MEE G   D+V ++ ++  +  +G+M +       M K G  PD   ++ L  GY +
Sbjct: 579 FEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAK 638

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G+ + A   L  M K    PN+V + ++I G+CN      A  ++  M   G+ PN+  
Sbjct: 639 KGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVH 698

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           Y  L+    +  +  +A    + M      P  +T+  + +
Sbjct: 699 YTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVN 739



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 192/410 (46%), Gaps = 1/410 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  E   +      EG  P  + Y  L+    R+      L L+ ++E  G+ P 
Sbjct: 286 LCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPT 345

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + + A+I+      ++ +   +  +MK+ G  P    YNT+I          ++L +L 
Sbjct: 346 VVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLN 405

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   +   P+  T+N L+ A+C +  +EEA  ++ + +   ++P+ ++Y  L   +   
Sbjct: 406 QMVASR-FDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVR 464

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           GE   A  +L EM      P+  T G ++ G    G +++A+    +M E +V P+  ++
Sbjct: 465 GEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIY 524

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N LI G    +        L  M E  V+PD   ++T++D +  +  +   ++IF+ M +
Sbjct: 525 NVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEE 584

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G   DI  ++ + KGY ++G   +A   ++SMRK G  P+   +TT+I G+     ++ 
Sbjct: 585 KGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKA 644

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           A+     M +    PN+ TY +L+ GY        AE L   M+ +G+ P
Sbjct: 645 ALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFP 694



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 99/440 (22%), Positives = 189/440 (42%), Gaps = 53/440 (12%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  + N ++     P ++T+ TL+AA  R+   +  L L+ +  +  ++P+ + +  +I
Sbjct: 399 QALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLI 458

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +     G V  A  +  +M   G  P   T   LI G    G+ +E+L + + M++ + V
Sbjct: 459 HGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAE-RQV 517

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA--------------------- 170
            P+   YN+L+   C K  +  A N++ +M+   +QPD                      
Sbjct: 518 MPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARK 577

Query: 171 --------------VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
                         V YN + + Y + G    A   +  M+     P+E T   ++ GY 
Sbjct: 578 IFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYA 637

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           K+G+++ A+RFL  M +    PN+V + SLI G+ +I ++D  +     M+  G+ P+VV
Sbjct: 638 KKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVV 697

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV--RAG---------- 324
            ++ ++ +        +    F+ M+     P+      L  G    R G          
Sbjct: 698 HYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTD 757

Query: 325 EPQKAESILTSMRKY---GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           +  K  ++L   +     G+ P +  +  +I   C    + +AM + EKM   G  P+  
Sbjct: 758 QAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPV 817

Query: 382 TYETLLWGYGEAKQP--WRA 399
           T+ +LL+G+    +   WR+
Sbjct: 818 TFLSLLYGFSSVGKSGKWRS 837



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/356 (20%), Positives = 141/356 (39%), Gaps = 70/356 (19%)

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           +++++D+    +D +  ++VR  C +  +EE   ++      G  P AV YN        
Sbjct: 264 EMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYN-------- 315

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM----------------- 225
                                      +++ GYC+ G++   +                 
Sbjct: 316 ---------------------------VLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVT 348

Query: 226 ------------------RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
                               L+ MKE  + PN+ ++N++I      + +      L  M 
Sbjct: 349 YGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMV 408

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
                PDVVTF+T++ A+   G + +  ++  + ++  +EP+   ++ L  G+   GE  
Sbjct: 409 ASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVM 468

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            A  +L  M   G  P+VV    +I G   + ++  A+ + EKM E  + P+   Y  L+
Sbjct: 469 VASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLI 528

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            G  + +    A+ LL  M E+ V+P K     + D +       +A+++ +  EE
Sbjct: 529 SGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEE 584



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 124/274 (45%), Gaps = 9/274 (3%)

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           TC ++V G C EG +E+  R +         P  V +N LI G+    D   V + L L+
Sbjct: 279 TC-VMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGD---VGRGLLLL 334

Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            E    G+ P VVT+  I+        + K + +  +M + G+ P++ +++ +     + 
Sbjct: 335 GEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKC 394

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
               +A ++L  M      P+VV F T+I+ +C    ++ A+ +  +     + PN  +Y
Sbjct: 395 RSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSY 454

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             L+ G+    +   A +LL  M  +G  P   T+  +       G   EA  V +   E
Sbjct: 455 TPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAE 514

Query: 444 DRQSMPNKK-DEIAVESIHRKQNLSASNSTFLQI 476
            RQ MP+     + +  + +K+ LSA+ +  +++
Sbjct: 515 -RQVMPDANIYNVLISGLCKKRMLSAAKNLLVEM 547



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/281 (21%), Positives = 112/281 (39%), Gaps = 23/281 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G  +EA    + + + G  P   TYTTL+    ++   K+ L  +  + K   KP+ + +
Sbjct: 605 GMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTY 664

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            ++I      GN D A  +F  M+  G  P    Y  LI       K  ++    + M  
Sbjct: 665 ASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLL 724

Query: 128 DKNVKPNDRTYNILVRAW-----------CSK----NSIEEAWNVVYKMVASGIQPDAVT 172
           + +  PND T + LV              CS     +      +V   +++ G+ P    
Sbjct: 725 N-HCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISA 783

Query: 173 YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC---KEGNMEDAMRFLY 229
           YN +  +  ++    +A ++  +M N    P+  T   ++ G+    K G    A+   +
Sbjct: 784 YNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKSGKWRSALPNEF 843

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL-MEEF 269
           +  E E+   +  + +L+   +     D V + L L  EEF
Sbjct: 844 QQDEFEI---ICKYMTLLNQHVMSPVRDEVSRVLQLYAEEF 881


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 188/386 (48%), Gaps = 36/386 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  +A  +   +   G  P++ITY T++    +  +     +L+ ++    +
Sbjct: 236 INGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRI 295

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I FN +I+      NV  A K+F++M+  G +P   TYN+LI G  + GK +E+L 
Sbjct: 296 HPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALG 355

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   MS    +KPN  TYN L+  +C K  ++EA  ++  +   G+ P+ +T+NTL  AY
Sbjct: 356 LQDKMS-GMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAY 414

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A  +   M +  V PN  T   ++ G+C+EGN+++A +     KE+E +   
Sbjct: 415 GKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKL---AKEMEGN--- 468

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
                                        G+K D+VT++ ++DA    G   K   + D+
Sbjct: 469 -----------------------------GLKADLVTYNILVDALCKKGETRKAVRLLDE 499

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M + G+ P    ++ L  GY R G    A ++ T M K G   N+V +  +I G+CN  K
Sbjct: 500 MFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGK 559

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETL 386
           ++ A  +  +M E G+ PN  TY+ L
Sbjct: 560 LEEANRLLNEMLEKGLIPNRTTYDIL 585



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 207/428 (48%), Gaps = 37/428 (8%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G R + ++   ++ +L ++ R   + S+  ++ +  +  + + F+ +IN   + G   +A
Sbjct: 189 GFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKA 248

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
             + + MK  G  P+  TYNT+I GY   GK  ++  LL+ M   K + PN+ T+NIL+ 
Sbjct: 249 GDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVA-KRIHPNEITFNILID 307

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +C   ++  A  V  +M   G+QP+ VTYN+L                           
Sbjct: 308 GFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSL--------------------------- 340

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
                   ++G C  G +++A+    +M  + + PN+V +N+LI GF   K      + L
Sbjct: 341 --------INGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML 392

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             + + G+ P+V+TF+T++DA+  AG M     +   M+  G+ P++  ++ L  G+ R 
Sbjct: 393 DDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCRE 452

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G  ++A  +   M   G+  ++V +  ++   C   + ++A+ + ++M E+G+NP+  TY
Sbjct: 453 GNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTY 512

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             L+ GY        A  +  +ME+KG R    T  ++   +   G   EA R+L    E
Sbjct: 513 NALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLE 572

Query: 444 DRQSMPNK 451
            +  +PN+
Sbjct: 573 -KGLIPNR 579



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 156/305 (51%), Gaps = 19/305 (6%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F  +  +G +P ++TY +L+  L    +    L L  K+   G+KP+ + +NA+IN
Sbjct: 318 AKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALIN 377

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              +   + EA ++   +   G  P   T+NTLI  YG  G+ +++  LL+ M  D  V 
Sbjct: 378 GFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF-LLRSMMLDTGVC 436

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           PN  TYN L+  +C + +++EA  +  +M  +G++ D VTYN L  A  + GET +A ++
Sbjct: 437 PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRL 496

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           L EM    + P+  T   ++ GY +EGN   A+     M++     N+V +N LIKGF +
Sbjct: 497 LDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCN 556

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI-- 310
               +  ++ L  M E G+ P+  T+  +                 D+M++ G  PDI  
Sbjct: 557 KGKLEEANRLLNEMLEKGLIPNRTTYDILR----------------DEMMEKGFIPDIDG 600

Query: 311 HVFSI 315
           H++++
Sbjct: 601 HLYNV 605



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 169/319 (52%), Gaps = 6/319 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  +   ++ +   P  IT+  L+    R +   +   +  ++++ G++P+ + +
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N++IN    +G +DEA+ +  KM   G KP   TYN LI G+      +E+ ++L  + +
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK 397

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + + PN  T+N L+ A+     +++A+ +   M+ +G+ P+  TYN L   + + G   
Sbjct: 398 -RGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVK 456

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++  EM+ N ++ +  T  I+V   CK+G    A+R L  M E+ ++P+ + +N+LI
Sbjct: 457 EARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALI 516

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G+    +S       TLME+ G + ++VT++ ++  + + G + +   + ++M++ G+ 
Sbjct: 517 DGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLI 576

Query: 308 PDIHVFSIL-----AKGYV 321
           P+   + IL      KG++
Sbjct: 577 PNRTTYDILRDEMMEKGFI 595



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 134/263 (50%), Gaps = 8/263 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  EA  + + +   G +P ++TY  L+    ++K  K    ++  + K G+
Sbjct: 341 INGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGL 400

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I FN +I+A  ++G +D+A  +   M D+G  P  STYN LI G+   G  +E+ K
Sbjct: 401 APNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARK 460

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M +   +K +  TYNILV A C K    +A  ++ +M   G+ P  +TYN L   Y
Sbjct: 461 LAKEM-EGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGY 519

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G +  A  +   M+    R N  T  +++ G+C +G +E+A R L  M E  + PN 
Sbjct: 520 FREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNR 579

Query: 241 VVFNSLI-----KGFLDIKDSDG 258
             ++ L      KGF  I D DG
Sbjct: 580 TTYDILRDEMMEKGF--IPDIDG 600



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 147/340 (43%), Gaps = 35/340 (10%)

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           ++LV A+     ++ A     +    G +  A++ N +  +  + G     E +  EM  
Sbjct: 163 DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIR 222

Query: 199 NQVRPNERTCGIIVSGY-----------------------------------CKEGNMED 223
            ++  N  T  ++++G                                    CK G M  
Sbjct: 223 RRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFK 282

Query: 224 AMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD 283
           A   L  M    +HPN + FN LI GF   ++     K    M+  G++P+VVT++++++
Sbjct: 283 ADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLIN 342

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
              S G + +   + D M   G++P++  ++ L  G+ +    ++A  +L  + K G+ P
Sbjct: 343 GLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAP 402

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           NV+ F T+I  +  A +M  A  +   M + G+ PN+ TY  L+ G+        A +L 
Sbjct: 403 NVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLA 462

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           + ME  G++    T  ++ D+    G  R+A R+L    E
Sbjct: 463 KEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFE 502


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 203/438 (46%), Gaps = 24/438 (5%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV   +P  A  +F+ ++  G  P+++TY TL+ A   Q        +  ++    + P+
Sbjct: 161 LVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPN 220

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +  MI A  E G + +A ++F  MK++G +P   TYN L+ G+        ++ L Q
Sbjct: 221 VVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQ 280

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            + +   + PN   +  L+  +C      EA  +  +M   G+ P    YN+L     + 
Sbjct: 281 ELLK-SGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRS 339

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A  +  EM    + P+E TC I+V G C  G M  A RFL  ++E  V+ N   +
Sbjct: 340 GNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAY 399

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+LI  +  I + +      T M E G++P+VV++S+++D  S  G M     I+ +MV 
Sbjct: 400 NALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVA 459

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GIEP++  ++ L  G+ + G    A  +   M + G+ PN +  + ++ G C   ++Q 
Sbjct: 460 KGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQE 519

Query: 364 AM---------------SIY-----EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           A+               S++     E+ C I   PN   Y TL++G     Q   A +L 
Sbjct: 520 AVRFVMEYSGLKCSDIHSVFSNFTIEEECLI---PNSVIYMTLIYGLYLDGQHCEAGKLF 576

Query: 404 QVMEEKGVRPKKSTIQLV 421
             M + G+ P   T  L+
Sbjct: 577 SYMRKSGMIPDSFTYTLL 594



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/439 (23%), Positives = 209/439 (47%), Gaps = 5/439 (1%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
              ++ A S+ G +DEA+ +F++++     P     N ++ G     +P  + +L   M 
Sbjct: 122 LGVLVIALSQMGLLDEALYVFRRLRT---LPALPACNAVLDGLVKARRPGCAWELFDEML 178

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + + + P+  TYN L+ A   + ++ +A  V  +MVA  I P+ VTY T+  A  + G  
Sbjct: 179 R-RGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCI 237

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             AE++   M+   ++PN+ T  +++SG+C+  ++  A+     + +  ++PN V+F +L
Sbjct: 238 GDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTL 297

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I GF   K           M  FGV P V  ++++MD    +G   +   ++ +M + G+
Sbjct: 298 IDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGL 357

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD    SI+ +G    G+   A+  L  +++ GV+ N   +  +I  +C    ++ A++
Sbjct: 358 CPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALA 417

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
              +M E+GI PN+ +Y +L+ G+ +  +   A  +   M  KG+ P   T   +     
Sbjct: 418 TCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHA 477

Query: 427 AIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSE-HN 485
             G    A R+ K   E+  S       + V+ + R+  +  +    ++  G+  S+ H+
Sbjct: 478 KNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHS 537

Query: 486 GSSAAKIRSQIVLRSDTVW 504
             S   I  + ++ +  ++
Sbjct: 538 VFSNFTIEEECLIPNSVIY 556



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 179/397 (45%), Gaps = 28/397 (7%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G   +A  +F+ + E G +P   TY  L++   ++    S + L  ++ K G+ P+
Sbjct: 231 LCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPN 290

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +++F  +I+   ++    EA  +F +M   G  PT   YN+L+ G    G  +E+L L Q
Sbjct: 291 AVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQ 350

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M++   + P++ T +I+VR  C    +  A   +  +   G+  +A  YN L   Y + 
Sbjct: 351 EMTR-LGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRI 409

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A      M    + PN  +   ++ G+ K G M+ AM     M    + PN+V +
Sbjct: 410 GNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTY 469

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSS------------- 287
            +LI G      + G+D A  L +E    G+ P+ +T S ++D                 
Sbjct: 470 TALIHGH---AKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVME 526

Query: 288 -AGLMGKCQEIFDDMVKAGIE-----PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
            +GL  KC +I        IE     P+  ++  L  G    G+  +A  + + MRK G+
Sbjct: 527 YSGL--KCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGM 584

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
            P+   +T +I G C    +  AM +Y  M +IG+ P
Sbjct: 585 IPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 621



 Score = 40.8 bits (94), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 2/92 (2%)

Query: 9   KPHEAHYIFN--CLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           K  + H +F+   + EE   P  + Y TL+  L    +      L S + K GM PDS  
Sbjct: 531 KCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFT 590

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPT 98
           +  +I      G V  AM ++  M   G KPT
Sbjct: 591 YTLLIRGQCMLGYVLNAMMLYADMMKIGVKPT 622


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 211/447 (47%), Gaps = 26/447 (5%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P ++TY  L+    R+++      ++S +  +G  P   +FN++I+A   SG+   A K+
Sbjct: 332 PNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKL 391

Query: 87  FQKMKDSGCKPTTSTYNTLIKGY-GNVGKPEESLKLLQLMSQ------DKNVKPNDRTYN 139
            +KM D GC+P    YN LI G  GN   P  SL +L+L  +      D +V  N    +
Sbjct: 392 LKKMGDCGCQPGYVVYNILIGGICGNEKLP--SLDVLELAEKAYGEMLDAHVVLNKVNVS 449

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L R  C     E+A++++ +M++ G  PD  TY+ +        +   A  +  EM++N
Sbjct: 450 NLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSN 509

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            V P+  T  I++  +CK G ++ A ++   M      PN+V + +LI  +L  +     
Sbjct: 510 HVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSA 569

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV-KAGI------------ 306
           ++   +M   G  P+VVT++ ++D    +G + K  +I+  M   A I            
Sbjct: 570 NELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629

Query: 307 ---EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
              +P+I  +  L  G  +A + ++A  +L  M   G  PN +++  +I G+C   K+  
Sbjct: 630 NIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDE 689

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  ++ KM E G  PN+ TY +L+    + K+   A ++L  M E    P       + D
Sbjct: 690 AQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMID 749

Query: 424 SWRAIGLAREAKRVLKSAEEDRQSMPN 450
               +G   EA R++ S  E++   PN
Sbjct: 750 GLCKVGKTDEAYRLM-SMMEEKGCHPN 775



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 185/406 (45%), Gaps = 22/406 (5%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G GK  +A+ I   ++ +G  P   TY+ ++  L    +  +   L  +++ + + PD
Sbjct: 455 LCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPD 514

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +  +I++  + G + +A K F +M   GC P   TY  LI  Y    K   + +L +
Sbjct: 515 VFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFE 574

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           +M  +  + PN  TY  L+   C    IE+A  +  +M  +   PD              
Sbjct: 575 MMLSEGCI-PNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDV------------- 620

Query: 184 GETYRAEQMLFEMQNNQVR-PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                   M F++ +  +R PN  T G +V G CK   +++A   L  M      PN +V
Sbjct: 621 -------DMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIV 673

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +++LI GF  +   D      T M E G  P+V T+S+++D       +    ++   M+
Sbjct: 674 YDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRML 733

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           +    P++ +++ +  G  + G+  +A  +++ M + G HPNVV +T +I G+  A K+ 
Sbjct: 734 ENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVD 793

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           + + +  +M   G  PN  TY  L+     A     A +LL  M++
Sbjct: 794 KCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQ 839



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 199/445 (44%), Gaps = 33/445 (7%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           T    V  L +  R++  L+LI   EK+  K D++++  MI+   E+   +EAM    +M
Sbjct: 269 TLGCFVHLLCKAGRWREALALI---EKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRM 325

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
           + S C P   TY  L+ G     +     ++L +M  +    P+ R +N L+ A+C    
Sbjct: 326 RSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITE-GCYPSRRIFNSLIHAYCRSGD 384

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYA------QYGETYRAEQMLFEMQNNQVRPN 204
              A+ ++ KM   G QP  V YN L                  AE+   EM +  V  N
Sbjct: 385 YSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLN 444

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
           +     +    C  G  E A   +  M      P+   ++ +I G L   ++  VD A  
Sbjct: 445 KVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVI-GLL--CNASKVDNAFL 501

Query: 265 LMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           L EE     V PDV T++ ++D++   GL+ + ++ FD+MV+ G  P++  ++ L   Y+
Sbjct: 502 LFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYL 561

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM------CEIG 375
           +A +   A  +   M   G  PNVV +T +I G C + ++++A  IY +M       ++ 
Sbjct: 562 KARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVD 621

Query: 376 I----------NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           +          +PN+ TY  L+ G  +A +   A +LL VM  +G  P       + D +
Sbjct: 622 MYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGF 681

Query: 426 RAIGLAREAKRVLKSAEEDRQSMPN 450
             +G   EA+ V     E R   PN
Sbjct: 682 CKVGKLDEAQMVFTKMSE-RGYGPN 705



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/485 (23%), Positives = 211/485 (43%), Gaps = 58/485 (11%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA-C 74
           I + +I EG  P+   + +L+ A  R   +     L+ K+   G +P  +++N +I   C
Sbjct: 356 ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC 415

Query: 75  SE----------------------------------------SGNVDEAMKIFQKMKDSG 94
                                                     +G  ++A  I ++M   G
Sbjct: 416 GNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKG 475

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
             P TSTY+ +I    N  K + +  L + M  + +V P+  TY IL+ ++C    +++A
Sbjct: 476 FIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSN-HVVPDVFTYTILIDSFCKVGLLQQA 534

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
                +MV  G  P+ VTY  L  AY +  +   A ++   M +    PN  T   ++ G
Sbjct: 535 RKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDG 594

Query: 215 YCKEGNMEDAMRFLYRMK------ELEVH----------PNLVVFNSLIKGFLDIKDSDG 258
           +CK G +E A +   RM+      +++++          PN+  + +L+ G         
Sbjct: 595 HCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKE 654

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
               L +M   G +P+ + +  ++D +   G + + Q +F  M + G  P+++ +S L  
Sbjct: 655 ARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
              +      A  +L+ M +    PNV+++T +I G C   K   A  +   M E G +P
Sbjct: 715 RLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP 774

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           N+ TY  ++ G+G+A +  +  EL++ M  KG  P   T +++ +   A GL  +A ++L
Sbjct: 775 NVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834

Query: 439 KSAEE 443
              ++
Sbjct: 835 DEMKQ 839



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/421 (23%), Positives = 193/421 (45%), Gaps = 17/421 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L    K   A  +F  +      P + TYT L+ +  +    +       ++ +DG 
Sbjct: 487 IGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGC 546

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + + A+I+A  ++  +  A ++F+ M   GC P   TY  LI G+   G+ E++ +
Sbjct: 547 APNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQ 606

Query: 121 LLQLMS--------------QDKNVK-PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
           +   M                D N++ PN  TY  LV   C  + ++EA +++  M   G
Sbjct: 607 IYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEG 666

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
            +P+ + Y+ L   + + G+   A+ +  +M      PN  T   ++    K+  ++ A+
Sbjct: 667 CEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLAL 726

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           + L RM E    PN++++  +I G   +  +D   + +++MEE G  P+VVT++ ++D +
Sbjct: 727 KVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGF 786

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
             AG + KC E+   M   G  P+   + +L      AG    A  +L  M++     ++
Sbjct: 787 GKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHM 846

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
             +  VI G+     +  ++ + +++ E    P +  Y  L+  + +A +   A EL + 
Sbjct: 847 AGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKE 904

Query: 406 M 406
           M
Sbjct: 905 M 905



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/346 (22%), Positives = 160/346 (46%), Gaps = 38/346 (10%)

Query: 21  IEEGH--RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESG 78
           I++G+   P + TY  LV  L +  + K    L+  +  +G +P+ I+++A+I+   + G
Sbjct: 626 IDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVG 685

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
            +DEA  +F KM + G  P   TY++LI       + + +LK+L  M ++ +  PN   Y
Sbjct: 686 KLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN-SCAPNVIIY 744

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
             ++   C     +EA+ ++  M   G  P+ VTY  +   + + G+  +  +++ +M  
Sbjct: 745 TEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGA 804

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF-------L 251
               PN  T  ++++  C  G ++DA + L  MK+     ++  +  +I+GF       L
Sbjct: 805 KGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISL 864

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVT----------------------------FSTIMD 283
            + D    + A+ ++  + +  D                               +S++++
Sbjct: 865 GLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIE 924

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           + S A  + K  E++ DM+K G  P++ +F  L KG +R    ++A
Sbjct: 925 SLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEA 970



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/439 (22%), Positives = 175/439 (39%), Gaps = 67/439 (15%)

Query: 98  TTSTYNTLIKGYGNVGK---PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
           T   Y+ L++  G  G    PE+ L+  ++  +DK +    +  N+L+R  C +N +   
Sbjct: 161 TGPVYHALLEVLGCGGNDRVPEQFLR--EIRDEDKEIL--GKLLNVLIRK-CCRNGL--- 212

Query: 155 WNVVYKMVAS----GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           WNV  + +      G +P  +TYN L R + +      A  +  EM ++    +  T G 
Sbjct: 213 WNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGC 272

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
            V   CK G   +A+  +   ++ E   + V++  +I G  +    +     L+ M    
Sbjct: 273 FVHLLCKAGRWREALALI---EKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSS 329

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
             P+VVT+  ++        +G+C+ I   M+  G  P   +F+ L   Y R+G+   A 
Sbjct: 330 CIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAY 389

Query: 331 SILTSMRKYGVHPNVVMFTTVISG------------------------------------ 354
            +L  M   G  P  V++  +I G                                    
Sbjct: 390 KLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVS 449

Query: 355 -----WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
                 C A K ++A SI  +M   G  P+  TY  ++     A +   A  L + M+  
Sbjct: 450 NLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSN 509

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIA-VESIHRKQNLSA 468
            V P   T  ++ DS+  +GL ++A++       D    PN     A + +  + + +S+
Sbjct: 510 HVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD-GCAPNVVTYTALIHAYLKARKMSS 568

Query: 469 SNSTFLQ------IPGVVS 481
           +N  F        IP VV+
Sbjct: 569 ANELFEMMLSEGCIPNVVT 587


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 210/426 (49%), Gaps = 7/426 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G    A   F+ ++  G +P++ T   ++A++ +  R   + S   ++    + P+   
Sbjct: 118 QGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSS 177

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           FN +I+     G + +A+ I   M+ +G  PT  +YNTL+      G+ + +L L+  M 
Sbjct: 178 FNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHM- 236

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + K ++ +  TYN+ + + C  +   + + V+ KM    I P+ V+YNTL   + + G+ 
Sbjct: 237 ECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKI 296

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++  EM    + PN  T  I+++GYC  GN E+A+R L  M+  +V PN V   +L
Sbjct: 297 GVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTL 356

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKP---DVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           + G   +  S   D A  ++E + +     + ++ + ++D     GL+ +  ++  +M K
Sbjct: 357 LNG---LYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCK 413

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ PDI  FS+L  G+ + G   KA+ +++ + + G  PN V+F+T+I   C    +  
Sbjct: 414 DGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYE 473

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           AM  Y  M   G N +  T  +L+    E  +   AEE L  +   G+ P   T   + +
Sbjct: 474 AMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIIN 533

Query: 424 SWRAIG 429
            +  +G
Sbjct: 534 GYANVG 539



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 201/404 (49%), Gaps = 1/404 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L  +GK  +A  I   +   G+ PT+++Y TL++   ++ RFK  L LI  +E  G+
Sbjct: 182 ISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGI 241

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + D   +N  I++   +    +   + +KM++    P   +YNTLI G+   GK   + +
Sbjct: 242 QADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATR 301

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M +  N+ PN  TYNIL+  +C   + EEA  V+  M A+ ++P+ VT  TL    
Sbjct: 302 VFNEMIE-LNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGL 360

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +   A  +L     N+   N  +  +++ G C+ G +++A + L  M +  VHP++
Sbjct: 361 YKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDI 420

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + F+ LI GF  + + +   + ++ +   G  P+ V FST++      G + +  + +  
Sbjct: 421 ITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAA 480

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G   D    + L       G+  +AE  L  + + G+ PN V F  +I+G+ N   
Sbjct: 481 MNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGD 540

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
              A S++++M   G +P+  TY +LL    + +  W A +LL+
Sbjct: 541 GSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLK 584



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/408 (24%), Positives = 181/408 (44%), Gaps = 1/408 (0%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
            +  L+    RQ      ++  S +   G KP     N ++ +  ++         F++M
Sbjct: 107 VFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQM 166

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
             S   P  S++N LI      GK ++++ +L +M ++  V P   +YN L+   C K  
Sbjct: 167 LTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYV-PTIVSYNTLLSWCCKKGR 225

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
            + A  +++ M   GIQ D  TYN    +  +   + +   +L +M+N  + PNE +   
Sbjct: 226 FKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNT 285

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           +++G+ KEG +  A R    M EL + PNL+ +N LI G+    + +   + L +ME   
Sbjct: 286 LINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEAND 345

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           V+P+ VT  T+++    +      + I +         +    +++  G  R G   +A 
Sbjct: 346 VRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAF 405

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +L  M K GVHP+++ F+ +I+G+C    + +A  +  K+   G  PN   + TL++  
Sbjct: 406 QLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNS 465

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            +    + A +    M   G      T   +  S    G   EA+  L
Sbjct: 466 CKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFL 513



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/488 (22%), Positives = 203/488 (41%), Gaps = 72/488 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N  V +GK   A  +FN +IE    P LITY  L+        F+  L ++  +E + +
Sbjct: 287 INGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDV 346

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ +    ++N   +S   D A  I ++   +       ++  +I G    G  +E+ +
Sbjct: 347 RPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQ 406

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M +D  V P+  T+++L+  +C   +I +A  V+ K+   G  P+ V ++TL    
Sbjct: 407 LLIEMCKD-GVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNS 465

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G  Y A +    M  N    +  TC  +V+  C+ G + +A  FL+ +  + + PN 
Sbjct: 466 CKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNS 525

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP--------------------------- 273
           V F+ +I G+ ++ D  G       M   G  P                           
Sbjct: 526 VTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKK 585

Query: 274 --------DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
                   D ++++T++   S +G + +   +F++M++  I PD + ++ +  G +R G 
Sbjct: 586 LHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGR 645

Query: 326 PQKAESILTS-MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN------- 377
              A   L   M+K  +  N +++T  I G   A + + A+ ++++M E G++       
Sbjct: 646 LVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALN 705

Query: 378 ----------------------------PNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
                                       PNL T+  LL GY   +      +L  +M   
Sbjct: 706 SITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRS 765

Query: 410 GVRPKKST 417
           G  P + T
Sbjct: 766 GFFPNRLT 773



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 93/399 (23%), Positives = 173/399 (43%), Gaps = 43/399 (10%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           I++T ++  L R         L+ ++ KDG+ PD I F+ +IN   + GN+++A ++  K
Sbjct: 386 ISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSK 445

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           +   G  P    ++TLI     VG   E++K    M+ +     ++ T N LV + C   
Sbjct: 446 IYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQ-NADNFTCNSLVASLCENG 504

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            + EA   ++ +   G+ P++VT++ +   YA  G+   A  +   M +    P+  T G
Sbjct: 505 KLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYG 564

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            ++   CK  N  +A + L ++  + +  + + +N+LI   ++I  S  + +A+ L EE 
Sbjct: 565 SLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLI---VEISKSGNLLEAVRLFEEM 621

Query: 270 ---GVKPDVVTFSTIM------------------------------------DAWSSAGL 290
               + PD  T++ I+                                    D    AG 
Sbjct: 622 IQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQ 681

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
                 +F +M + G+  D+   + +  GY R G+   A S+++  R   V PN+  F  
Sbjct: 682 SKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNI 741

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           ++ G+     +     +Y  M   G  PN  TY +L+ G
Sbjct: 742 LLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILG 780



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 119/533 (22%), Positives = 214/533 (40%), Gaps = 45/533 (8%)

Query: 5    VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
            VG G    A  +F+ +I  GH P+  TY +L+  L + + F     L+ K+    +  D+
Sbjct: 538  VGDGSG--AFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDT 595

Query: 65   ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
            I +N +I   S+SGN+ EA+++F++M  +   P + TY  ++ G    G+   +   L  
Sbjct: 596  ISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGR 655

Query: 125  MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
            + Q + +  N   Y   +         + A  +  +M   G+  D +  N++   Y++ G
Sbjct: 656  LMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMG 715

Query: 185  ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
            + + A  ++ + +N  V PN  T  I++ GY +  ++    +    M+     PN + ++
Sbjct: 716  KVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYH 775

Query: 245  SLIKGF-------LDIK-------------------------DSDGVDKALTL---MEEF 269
            SLI G        L IK                         + + +DK + L   ME F
Sbjct: 776  SLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVF 835

Query: 270  GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
             V  D  T   + D      +         +M+K G  P    +  + K   R G+ Q A
Sbjct: 836  RVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGA 895

Query: 330  ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
              +   M   G+  +      ++ G     K++ AM I ++M  +   P   T+ TL+  
Sbjct: 896  FKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHV 955

Query: 390  YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS-- 447
            + +      A  L  +ME   V+       ++  +  A G   +    L   EE +Q   
Sbjct: 956  FCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANG---DVITALDFYEEIKQKGL 1012

Query: 448  MPNKKD-EIAVESIHRKQNLSASNSTF--LQIPGVVSSEHNGSSAAKIRSQIV 497
            +PN     + V +I  K  +S        L   G+VS   +G S    R  +V
Sbjct: 1013 LPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYLDGKSQKSCRDFVV 1065



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/385 (20%), Positives = 163/385 (42%), Gaps = 1/385 (0%)

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
           +F+ +I      G V  A+  F  M   G KP+  T N ++       +        + M
Sbjct: 107 VFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQM 166

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
              + V PN  ++NIL+   C +  +++A N++  M  +G  P  V+YNTL     + G 
Sbjct: 167 LTSR-VCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGR 225

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A  ++  M+   ++ +  T  + +   C+          L +M+   + PN V +N+
Sbjct: 226 FKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNT 285

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           LI GF+         +    M E  + P+++T++ +++ +   G   +   + D M    
Sbjct: 286 LINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEAND 345

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + P+      L  G  ++ +   A +IL          N +  T +I G C    +  A 
Sbjct: 346 VRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAF 405

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            +  +MC+ G++P++ T+  L+ G+ +     +A+E++  +  +G  P       +  + 
Sbjct: 406 QLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNS 465

Query: 426 RAIGLAREAKRVLKSAEEDRQSMPN 450
             +G   EA +   +   + Q+  N
Sbjct: 466 CKVGNVYEAMKFYAAMNLNGQNADN 490



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 95/246 (38%), Gaps = 45/246 (18%)

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ--- 295
           N  VF+ LI+ +L            + M   G KP V T + IM     A ++  C+   
Sbjct: 104 NPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIM-----ASMVKNCRAHL 158

Query: 296 --EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
               F  M+ + + P++  F+IL       G+ +KA +ILT M + G  P +V + T++S
Sbjct: 159 VWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLS 218

Query: 354 GWCNAVKMQRAMSIYEKM---------CEIG--------------------------INP 378
             C   + + A+ +   M         C                             I P
Sbjct: 219 WCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITP 278

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           N  +Y TL+ G+ +  +   A  +   M E  + P   T  ++ + +   G   EA RVL
Sbjct: 279 NEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVL 338

Query: 439 KSAEED 444
              E +
Sbjct: 339 DVMEAN 344


>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
 gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
          Length = 384

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 188/382 (49%), Gaps = 8/382 (2%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQK-RFKSILSLISKVEKDGMKPDSILFNAMINAC 74
           +F  ++++G   T++TYT ++    RQK +    L L+  +++ G KPD IL+N ++N  
Sbjct: 4   LFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGL 63

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
             SG ++ A KI   MK         TY  LIK Y N G+ ++  KL Q M +DK   PN
Sbjct: 64  VNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEM-KDKGESPN 122

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
             TYN L++ +  K   +EA  +  +M   G   D  TYN     Y + G     E++L 
Sbjct: 123 SWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLD 182

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           EM    V P++ T   ++  Y K+     A   L  M E    PN+  +N ++      +
Sbjct: 183 EMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLS---SAR 239

Query: 255 DSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
               V +A  L E     GV P++VT+S ++  +   GL  +  +++D+M++AG  P I 
Sbjct: 240 KEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCII 299

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            +S L + Y   G  Q+A +    MRK G+ P+  ++T ++  +  A + + A  +Y +M
Sbjct: 300 AYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEM 359

Query: 372 CEIGINPNLKTYETLLWGYGEA 393
            + G  P+  TY  L+  +  A
Sbjct: 360 TKEGFVPDGITYGILVRAFANA 381



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 166/354 (46%), Gaps = 2/354 (0%)

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGY-GNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           A  +F +M   GC+ T  TY  +I GY     K + +L+LL++M ++   KP++  YN L
Sbjct: 1   ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVM-KESGKKPDEILYNCL 59

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           V    +   +E A  ++  M    +  + VTY  L + YA  G      ++  EM++   
Sbjct: 60  VNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGE 119

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            PN  T   ++ GY ++G  ++A+     M  +    ++  +N  I  +      + +++
Sbjct: 120 SPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMER 179

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            L  M+  GV PD VT++T++D ++      K  EI  +M +AG  P+I  ++I+     
Sbjct: 180 LLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSAR 239

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           +     +A  +  +++  GV PN+V ++ ++S +        A  ++++M E G  P + 
Sbjct: 240 KEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCII 299

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
            Y  L+  YG       A    Q M + G+ P       + D++   G  REA+
Sbjct: 300 AYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAE 353



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 148/324 (45%), Gaps = 1/324 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N LV  G+   A  I + +  +     L+TYT L+       R +    L  +++  G 
Sbjct: 60  VNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGE 119

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+S  +NA+I      G   EA++++ +M   GC     TYN  I  YG  G  E+  +
Sbjct: 120 SPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMER 179

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M   K V P+  TYN L+  +  K+   +A  ++ +M  +G +P+  TYN +  + 
Sbjct: 180 LLDEMDT-KGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSA 238

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A Q+   +++  V PN  T   ++S Y + G   +A +    M E    P +
Sbjct: 239 RKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCI 298

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + ++ LI+ +               M + G+ PD   ++ +MDA+  AG   + + ++ +
Sbjct: 299 IAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFE 358

Query: 301 MVKAGIEPDIHVFSILAKGYVRAG 324
           M K G  PD   + IL + +  AG
Sbjct: 359 MTKEGFVPDGITYGILVRAFANAG 382



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 133/285 (46%), Gaps = 1/285 (0%)

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYA-QYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           A ++ Y+M+  G +   VTY  +   Y  Q  +   A ++L  M+ +  +P+E     +V
Sbjct: 1   ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLV 60

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           +G    G +E A + L  MK  +V  NLV + +LIK + +        K    M++ G  
Sbjct: 61  NGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGES 120

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           P+  T++ ++  +   GL  +  E++D+M   G   D+H ++I    Y + G  +  E +
Sbjct: 121 PNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERL 180

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           L  M   GV P+ V + T++  +       +A  I  +M E G  PN+ TY  +L    +
Sbjct: 181 LDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARK 240

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
            +    A +L + ++ KGV P   T   +   +   GL  EA ++
Sbjct: 241 EQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKL 285



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 133/276 (48%), Gaps = 2/276 (0%)

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKE-GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           + + M  +       T  +I+ GY ++   ++ A+R L  MKE    P+ +++N L+ G 
Sbjct: 4   LFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGL 63

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
           ++    +  +K L  M+   V  ++VT++ ++  +++ G +  C+++F +M   G  P+ 
Sbjct: 64  VNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNS 123

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             ++ L +GY R G  ++A  +   M   G   +V  +   I+ +     ++    + ++
Sbjct: 124 WTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDE 183

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M   G+ P+  TY TLL  Y +     +A E+L+ M E G RP   T  ++  S R    
Sbjct: 184 MDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQS 243

Query: 431 AREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNL 466
             EA ++ ++  + +  +PN     A+ S++ +  L
Sbjct: 244 VAEATQLFENL-KSKGVVPNIVTYSAMLSLYGRHGL 278


>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Glycine max]
          Length = 804

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 208/453 (45%), Gaps = 37/453 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDG 59
           +N     G+  +A  +FN + ++G  PTLITY  ++    +    + ++ +L+  +   G
Sbjct: 200 INAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEAMRSRG 259

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + PD   +N +I+ C      +EA+ +FQ+MK  G  P   TYN L+  +G   +P+E++
Sbjct: 260 VAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAM 319

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K+LQ M  +    P   TYN L+ A+     +EEA ++  +MV  GI+PD  TY TL   
Sbjct: 320 KVLQEMEAN-GFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSG 378

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + + G+   A Q+  EM+    +PN  T   ++  +   G   + M+    +K     P+
Sbjct: 379 FEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPD 438

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +V +N+L+  F        V      M+  G   +  TF+T++ A+S  G   +   ++ 
Sbjct: 439 IVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYK 498

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            M++AG+ PD+  ++ +     R G  +++E +L  M      PN + +++++  + N  
Sbjct: 499 SMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGK 558

Query: 360 KMQR----AMSIYEKMCEI-------------------------------GINPNLKTYE 384
           +++R    A  IY    E                                GI+P++ T  
Sbjct: 559 EIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLN 618

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            +L  YG  +   +A E+L  M E    P  +T
Sbjct: 619 AMLSIYGRKQMVAKAHEILNFMHETRFTPSLTT 651



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 197/410 (48%), Gaps = 5/410 (1%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           ++  L +  R  S  SL+  ++ DG+  D   +  +INA S SG   +A+ +F KM+  G
Sbjct: 164 IIKILGKAGRVSSAASLLLALQNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDG 223

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI-EE 153
           C PT  TYN ++  YG +G P  ++  L    + + V P+  TYN L+ + C + S+ EE
Sbjct: 224 CNPTLITYNVVLNVYGKMGMPWSNVTALVEAMRSRGVAPDLYTYNTLI-SCCRRGSLYEE 282

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A ++  +M   G  PD VTYN L   + +      A ++L EM+ N   P   T   ++S
Sbjct: 283 AVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLIS 342

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
            Y K G +E+A+    +M    + P++  + +L+ GF      D   +    M   G KP
Sbjct: 343 AYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKP 402

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           ++ TF+ ++    + G   +  ++FDD+      PDI  ++ L   + + G   +   I 
Sbjct: 403 NICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIF 462

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M++ G       F T+IS +       +AM++Y+ M E G+ P+L TY  +L      
Sbjct: 463 KEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARG 522

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
               ++E++L  ME+   +P + +   +     A    +E +R+   AEE
Sbjct: 523 GLWEQSEKVLAEMEDGRCKPNELSYSSL---LHAYANGKEIERMNAFAEE 569



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 222/470 (47%), Gaps = 42/470 (8%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +P EA  +   +   G  PT +TY +L++A  +    +  L L +++   G+KPD   + 
Sbjct: 314 RPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYT 373

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK-------- 120
            +++   ++G  D A+++F +M+  GCKP   T+N LIK +GN GK  E +K        
Sbjct: 374 TLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLC 433

Query: 121 -----------LLQLMSQD----------KNVK-----PNDRTYNILVRAWCSKNSIEEA 154
                      LL +  Q+          K +K         T+N L+ A+    S ++A
Sbjct: 434 NCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQA 493

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
             V   M+ +G+ PD  TYN +  A A+ G   ++E++L EM++ + +PNE +   ++  
Sbjct: 494 MAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHA 553

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI----KGFLDIKDSDGVDKALTLMEEFG 270
           Y     +E    F   +    V  + V+  +L+    K  L I+     ++A   +   G
Sbjct: 554 YANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIE----TERAFLELRRRG 609

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           + PD+ T + ++  +    ++ K  EI + M +    P +  ++ L   Y R+   QK+E
Sbjct: 610 ISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSE 669

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            IL  + + G+ P+ + + TVI  +C   +M+ A  I+ +M +  + P++ TY T +  Y
Sbjct: 670 EILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATY 729

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
                   A ++++ M ++G +P ++T   + D +  +    EA   +K+
Sbjct: 730 AADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHEANSFVKN 779



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 103/439 (23%), Positives = 213/439 (48%), Gaps = 2/439 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA ++F  +  EG  P  +TY  L+    + +R +  + ++ ++E +G  P S+ +N++I
Sbjct: 282 EAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLI 341

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +A ++ G ++EA+ +  +M   G KP   TY TL+ G+   GK + ++++   M +    
Sbjct: 342 SAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEM-RAVGC 400

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KPN  T+N L++   ++    E   V   +      PD VT+NTL   + Q G   +   
Sbjct: 401 KPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSG 460

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  EM+         T   ++S Y + G+ + AM     M E  V P+L  +N+++    
Sbjct: 461 IFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALA 520

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                +  +K L  ME+   KP+ +++S+++ A+++   + +     +++    +E    
Sbjct: 521 RGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAV 580

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
           +   L     ++    + E     +R+ G+ P++     ++S +     + +A  I   M
Sbjct: 581 LLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFM 640

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
            E    P+L TY +L++ Y  ++   ++EE+L+ + EKG++P + +   V  ++   G  
Sbjct: 641 HETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRM 700

Query: 432 REAKRVLKSAEEDRQSMPN 450
           +EA R+  S  +D   +P+
Sbjct: 701 KEASRIF-SEMKDSALVPD 718



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 174/368 (47%), Gaps = 1/368 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  E   +F+ +      P ++T+ TL+A   +      +  +  ++++ G   +   
Sbjct: 417 RGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDT 476

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           FN +I+A S  G+ D+AM +++ M ++G  P  STYN ++      G  E+S K+L  M 
Sbjct: 477 FNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEM- 535

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +D   KPN+ +Y+ L+ A+ +   IE       ++ +  ++  AV   TL    ++    
Sbjct: 536 EDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLL 595

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
              E+   E++   + P+  T   ++S Y ++  +  A   L  M E    P+L  +NSL
Sbjct: 596 IETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSL 655

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +  +   ++    ++ L  + E G+KPD ++++T++ A+   G M +   IF +M  + +
Sbjct: 656 MYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSAL 715

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD+  ++     Y       +A  ++  M K G  P+   + +++  +C   +   A S
Sbjct: 716 VPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHEANS 775

Query: 367 IYEKMCEI 374
             + +  +
Sbjct: 776 FVKNLSNL 783


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 203/424 (47%), Gaps = 2/424 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
            F+ L   G RP  ++YT++V  L +  R      L  ++E +   P +  +N MI    
Sbjct: 268 FFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYG 327

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
            +   D+A K+ +++++ GC P+  ++N+++   G   K +E+L L  +M +D   KPN 
Sbjct: 328 SAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKD--AKPNI 385

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TYNI++   C    + EA+ +  +M  +G+ P+ ++ N +     +  +   A ++   
Sbjct: 386 STYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFES 445

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
                  PN  T   ++ G  K+G ++DA R   +M +     N +++ SLI+ F     
Sbjct: 446 ASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGR 505

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            +   K    M   G +PD+   +T MD    AG + K + IF+DM   G  PD+  +SI
Sbjct: 506 KEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSI 565

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  G  +AG+ ++  +I  +M + G   +   +  V+ G C + K+ +A  + E+M    
Sbjct: 566 LIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKH 625

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           ++P + TY +++ G  +  +   A  L +  + KG+         + D +  +G   EA 
Sbjct: 626 VHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAY 685

Query: 436 RVLK 439
            +L+
Sbjct: 686 LILE 689



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 195/419 (46%), Gaps = 11/419 (2%)

Query: 1   MNILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
           +NI+V +     +  EAH IF    E G  P  +TY +L+  L ++ +      L  K+ 
Sbjct: 423 VNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKML 482

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
             G   + I++ ++I      G  ++  KI+++M   G +P  +  NT +      G+ E
Sbjct: 483 DAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVE 542

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           +   + + M +     P+ R+Y+IL+          E  N+   M   G   DA  YN +
Sbjct: 543 KGRAIFEDM-KSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAV 601

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
                + G+  +A ++L EM+   V P   T G IV G  K   +++A       K   +
Sbjct: 602 VDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGI 661

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGK 293
             N+++++SLI GF  +     +D+A  ++EE    G+ P+V T++++MDA      + +
Sbjct: 662 ELNVILYSSLIDGFGKVGR---IDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDE 718

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
               F  M +    P+ + +SIL  G  R  +  KA      M+K G+ PNVV +TT+IS
Sbjct: 719 ALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMIS 778

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
           G      +  A S++E+    G  P+  ++  L+ G   A +P  A ++ +    +G R
Sbjct: 779 GLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCR 837



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 100/442 (22%), Positives = 206/442 (46%), Gaps = 7/442 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L   G+ +EA+ I + +   G  P L++   +V  L +  + +    +     + G 
Sbjct: 392 IDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGC 451

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+S+ + ++I+   + G +D+A ++F+KM D+G       Y +LI+ +   G+ E+  K
Sbjct: 452 NPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHK 511

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M + +  +P+    N  +        +E+   +   M + G  PD  +Y+ L    
Sbjct: 512 IYKEMIR-RGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGL 570

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+      +   M       + R    +V G CK G ++ A   L  MK   VHP +
Sbjct: 571 TKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTV 630

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             + S++ G   I   D +D+A  L EE    G++ +V+ +S+++D +   G + +   I
Sbjct: 631 ATYGSIVDGLAKI---DRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLI 687

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            ++M+K G+ P+++ ++ L    V+  E  +A     SM++    PN   ++ +I+G C 
Sbjct: 688 LEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCR 747

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             K  +A   +++M + G+ PN+ TY T++ G  +      A  L +  +  G  P  ++
Sbjct: 748 VQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSAS 807

Query: 418 IQLVADSWRAIGLAREAKRVLK 439
              + +         EA +V +
Sbjct: 808 FNALIEGMSNANRPMEAYQVFE 829



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/393 (23%), Positives = 193/393 (49%), Gaps = 6/393 (1%)

Query: 33  TTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKD 92
             LVA L R +R +    +I  +     +P    +  +I A +E+   + A+++ ++M+D
Sbjct: 145 AALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQD 204

Query: 93  SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIE 152
            G + +   + TL++     G+ E +L L+  + +   ++P+   YN+ +  +    S++
Sbjct: 205 VGYEVSVPLFTTLVRALAREGQMEPALALVDEV-KGSCLEPDIVLYNVCIDCFGKAGSVD 263

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
            AW   +++ A G++PD V+Y ++     + G    AE++  +M+  +  P       ++
Sbjct: 264 MAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMI 323

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF--G 270
            GY      +DA + L R++E    P++V FNS++     +     VD+ALTL +     
Sbjct: 324 MGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTC---LGKKRKVDEALTLFDVMKKD 380

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
            KP++ T++ I+D    AG + +  +I D+M  AG+ P++   +I+     +A + ++A 
Sbjct: 381 AKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAH 440

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            I  S  + G +PN V + ++I G     K+  A  ++EKM + G + N   Y +L+  +
Sbjct: 441 RIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNF 500

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
               +     ++ + M  +G RP  + +    D
Sbjct: 501 FMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMD 533



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 92/404 (22%), Positives = 174/404 (43%), Gaps = 36/404 (8%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KGK  +A+ +F  +++ GH    I YT+L+       R +    +  ++ + G +PD  L
Sbjct: 468 KGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTL 527

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            N  ++   ++G V++   IF+ MK  G  P   +Y+ LI G    G+  E+  + Q MS
Sbjct: 528 LNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMS 587

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM--------VAS-------------- 164
           Q +    + R YN +V   C    +++A+ V+ +M        VA+              
Sbjct: 588 Q-QGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRL 646

Query: 165 -------------GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
                        GI+ + + Y++L   + + G    A  +L EM    + PN  T   +
Sbjct: 647 DEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 706

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           +    K   +++A+     MKE++  PN   ++ LI G   ++  +        M++ G+
Sbjct: 707 MDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGL 766

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            P+VVT++T++   +  G +     +F+     G  PD   F+ L +G   A  P +A  
Sbjct: 767 IPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQ 826

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           +    R  G   NV    +++        +++A  +   + EI 
Sbjct: 827 VFEETRLRGCRLNVKTCISLLDALNKTECLEQAAIVGAVLSEIA 870



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 151/331 (45%), Gaps = 3/331 (0%)

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K+L+ MS      PN      LV        +E+A+ V+  M     +P    Y  L  A
Sbjct: 127 KVLEEMSHLGYGLPNPAC-AALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGA 185

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
            A+  +  RA ++L +MQ+     +      +V    +EG ME A+  +  +K   + P+
Sbjct: 186 LAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPD 245

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +V++N  I  F      D   K    ++  G++PD V++++++     AG +G+ +E+F 
Sbjct: 246 IVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFG 305

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            M      P  + ++ +  GY  A     A  +L  +R+ G  P+VV F ++++      
Sbjct: 306 QMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKR 365

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           K+  A+++++ M +    PN+ TY  ++     A +   A ++   ME  G+ P   ++ 
Sbjct: 366 KVDEALTLFDVM-KKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVN 424

Query: 420 LVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           ++ D         EA R+ +SA E R   PN
Sbjct: 425 IMVDRLCKANQLEEAHRIFESASE-RGCNPN 454



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 108/224 (48%)

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
           E++L EM +         C  +V+   +   +EDA R +  M+ L+  P    +  LI  
Sbjct: 126 EKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGA 185

Query: 250 FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
             + +  +   + L  M++ G +  V  F+T++ A +  G M     + D++  + +EPD
Sbjct: 186 LAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPD 245

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
           I ++++    + +AG    A      ++ +G+ P+ V +T+++   C A ++  A  ++ 
Sbjct: 246 IVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFG 305

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           +M      P    Y T++ GYG A++   A +LL+ + E+G  P
Sbjct: 306 QMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIP 349


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 197/430 (45%), Gaps = 9/430 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT +TYT LV  L +  R    ++++ ++ + G  P    +  +I+  S++G V+EA +I
Sbjct: 75  PTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRI 134

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN---VKPNDRTYNILVR 143
           F  M  +GC+P    Y  LIKG    GKPEE+  L +  +  K+     P+  TY  L+ 
Sbjct: 135 FVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLID 194

Query: 144 AWCSKNSIEEAWNVV-YKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
             C    I EA  V   + V  G  PDAVTY ++     + G      +   EM+N    
Sbjct: 195 GLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYE 254

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+  T   ++ G+ K   +  A R   +M +     + V +N ++ G             
Sbjct: 255 PDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYAT 314

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              MEE G    VVT+S +MD + S G +    E+F  M+  G EP++  ++I+ +G  R
Sbjct: 315 FLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCR 374

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK-MQRAMSIYEKMCEIGINPNLK 381
           AG+  KA      + +  + P+V  F   + G C  +  +   + ++E M   G +PNL 
Sbjct: 375 AGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLH 434

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI-GLAREAKRVLKS 440
           +Y  L+ G   A     A E+ + M  +GV P       +   W  I G   EA  V + 
Sbjct: 435 SYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLI-RWLCIAGRVDEALEVFR- 492

Query: 441 AEEDRQSMPN 450
            E +R+S P+
Sbjct: 493 -ELERRSAPD 501



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/451 (24%), Positives = 205/451 (45%), Gaps = 41/451 (9%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+  G+  EA  +   ++E+G+ PTL TYT ++  L++  R +    +   +  +G +PD
Sbjct: 87  LLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPD 146

Query: 64  SILFNAMINACSESGNVDEAMKIFQ----KMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + ++ A+I    +SG  +EA  +++    +   +   P   TY +LI G    G+  E+ 
Sbjct: 147 AFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEAR 206

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           ++    + ++   P+  TY  ++   C    +EE     ++M   G +PDAVTY  L   
Sbjct: 207 QVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDG 266

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + +     +A ++  +M  +    +  T  II+ G CK G + +A      M+E      
Sbjct: 267 FMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVAT 326

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG---------- 289
           +V +++L+ GF    +     +    M + G +P++V+++ I+     AG          
Sbjct: 327 VVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFE 386

Query: 290 -----------------LMGKCQ---------EIFDDMVKAGIEPDIHVFSILAKGYVRA 323
                            L G CQ         E+F+ MV  G  P++H +SIL  G  RA
Sbjct: 387 KLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRA 446

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G  + A  I   M   GV P+VV+F T+I   C A ++  A+ ++ ++ E    P+  +Y
Sbjct: 447 GGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFREL-ERRSAPDAWSY 505

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            +LL G    ++   A  L   M+ +G  P+
Sbjct: 506 WSLLDGLSRCERMEEARLLSFHMKLQGCAPR 536



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/400 (22%), Positives = 172/400 (43%), Gaps = 49/400 (12%)

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+   + +++   C +  ++EA++V+ + V +G +PD VTYN                  
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYN------------------ 46

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
                            + + G CK   ++DA + L +M E +  P  V + +L+ G L 
Sbjct: 47  -----------------VFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLK 89

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
               D     L  M E G  P + T++ ++D  S AG + + + IF DM+  G  PD  V
Sbjct: 90  AGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFV 149

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVH----PNVVMFTTVISGWCNAVKMQRAMSIY 368
           ++ L KG  ++G+P++A ++         H    P+VV +T++I G C A ++  A  ++
Sbjct: 150 YTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVF 209

Query: 369 -EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
            ++  E G  P+  TY +++ G  +  +     E    M  +G  P   T   + D +  
Sbjct: 210 DDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMK 269

Query: 428 IGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSEHNGS 487
             +  +A RV +   +    +      I ++ + +   ++ + +TFL +      E  G 
Sbjct: 270 AKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAM------EERGC 323

Query: 488 SAAKIRSQIVLR---SDTVWTATKSLFVNTYGSGVQPMVV 524
            A  +    ++    S+   +A   LF      G +P +V
Sbjct: 324 VATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLV 363



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 67/128 (52%), Gaps = 4/128 (3%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  ++ +G  P L +Y+ L+  + R    +  L +  ++   G+ PD ++FN +I    
Sbjct: 420 LFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLC 479

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
            +G VDEA+++F++++     P   +Y +L+ G     + EE+ +LL    + +   P  
Sbjct: 480 IAGRVDEALEVFRELERRS-APDAWSYWSLLDGLSRCERMEEA-RLLSFHMKLQGCAP-- 535

Query: 136 RTYNILVR 143
           R Y++ VR
Sbjct: 536 RHYDLTVR 543


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 185/360 (51%), Gaps = 1/360 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ GH P ++T+ +L+    R  R    L +  ++ + G +P+ +++N +I+   +S  
Sbjct: 142 MMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQ 201

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           VD A+ +  +M+  G +P   TYN+LI G  N G+ +++ +++  M++ + + P+  T+N
Sbjct: 202 VDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTK-REIYPDVFTFN 260

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+ A   +  I EA  +  +M+   + PD VTY+ L      Y     AEQM   M + 
Sbjct: 261 ALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSK 320

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+  T  I+++GYCK   +E  M+    M +  V  N V +  LI+G+      +  
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVA 380

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
           ++    M   GV P+++T++ ++      G + K   I  DM K+G++ DI  ++I+ +G
Sbjct: 381 EEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRG 440

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             +AGE   A  +  S+   G+ P++  +T ++ G         A +++ KM E GI PN
Sbjct: 441 MCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 190/390 (48%), Gaps = 1/390 (0%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
           L T   L+    R  +    LS + K+ K G +PD + F +++N       + +A+ +F 
Sbjct: 116 LCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFD 175

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
           +M + G +P    YNT+I G     + + +L LL  M  D  ++P+  TYN L+   C+ 
Sbjct: 176 RMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVD-GIRPDAVTYNSLISGLCNS 234

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
              ++A  +V  M    I PD  T+N L  A  + G    AE++  EM    + P+  T 
Sbjct: 235 GRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTY 294

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
            +++ G C    +++A +    M      P++V ++ LI G+   K  +   K    M +
Sbjct: 295 SLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            GV  + VT++ ++  +  AG +   +EIF  MV  G+ P+I  +++L  G    G+ +K
Sbjct: 355 RGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEK 414

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  IL  M+K G+  ++V +  +I G C A ++  A  +Y  +   G+ P++ TY  ++ 
Sbjct: 415 ALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMML 474

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
           G  +      A+ L + M+E G+ P +  +
Sbjct: 475 GLYKKGLRGEADALFRKMKEDGILPNECYV 504



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 180/339 (53%), Gaps = 7/339 (2%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           + ++A Y+F+ ++E G+ P ++ Y T++  L + K+  + L L++++E DG++PD++ +N
Sbjct: 166 RIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYN 225

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           ++I+    SG  D+A ++   M      P   T+N LI      G+  E+ +L + M + 
Sbjct: 226 SLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIR- 284

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           +++ P+  TY++L+   C  + ++EA  +   MV+ G  PD VTY+ L   Y +  +   
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
             ++  EM    V  N  T  +++ GYC+ G +  A      M    V PN++ +N L+ 
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLH 404

Query: 249 GFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           G     D+  ++KAL +   M++ G+  D+VT++ I+     AG +    +++  +   G
Sbjct: 405 GLC---DNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKG 461

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           + PDI  ++ +  G  + G   +A+++   M++ G+ PN
Sbjct: 462 LTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 172/342 (50%), Gaps = 1/342 (0%)

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D+++ +F  M      P+ + ++ L+     + K +  + L + M Q   +  N  T N
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM-QMLGIPHNLCTCN 120

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           IL+  +C  + +  A + + KM+  G +PD VT+ +L   + +    Y A  M   M   
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEM 180

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              PN      I+ G CK   +++A+  L RM+   + P+ V +NSLI G  +    D  
Sbjct: 181 GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDA 240

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            + ++ M +  + PDV TF+ ++DA    G + + +E++++M++  ++PDI  +S+L  G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYG 300

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
                   +AE +   M   G  P+VV ++ +I+G+C + K++  M ++ +M + G+  N
Sbjct: 301 LCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             TY  L+ GY  A +   AEE+ + M   GV P   T  ++
Sbjct: 361 TVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVL 402


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 178/363 (49%), Gaps = 1/363 (0%)

Query: 48  ILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIK 107
           +L LI +++  G+KP+   +N +I    ++G V EA ++ ++M   G  P    Y TLI 
Sbjct: 207 VLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLID 266

Query: 108 GYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ 167
           G+  +G    + +L   M Q + + P+  TY  ++   C    + EA  + ++MV   ++
Sbjct: 267 GFCKLGNVSSAYRLFDEM-QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLE 325

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
           PD VTY  L   Y + G+   A  +  +M    + PN  T   +  G CK G ++ A   
Sbjct: 326 PDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANEL 385

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
           L+ M    +  N+  +NSL+ G     + D   K +  ME  G  PD VT++T+MDA+  
Sbjct: 386 LHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCK 445

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
           +  M +  E+   M+   ++P +  F++L  G+  +G  +  E +L  M + G+ PN   
Sbjct: 446 SREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATT 505

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           + ++I  +C    M+    IY  MC  G+ P+  TY  L+ G+ +A+    A  L + M 
Sbjct: 506 YNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMV 565

Query: 408 EKG 410
            KG
Sbjct: 566 GKG 568



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 202/408 (49%), Gaps = 5/408 (1%)

Query: 20  LIEE----GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           LIEE    G +P   TY  ++  L +  +      ++ ++  +G+ PD +++  +I+   
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 269

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + GNV  A ++F +M+     P   TY  +I G    G+  E+ KL   M   K ++P++
Sbjct: 270 KLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVC-KRLEPDE 328

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY  L+  +C +  ++EA+++  +M+  G+ P+ VTY  LA    + GE   A ++L E
Sbjct: 329 VTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHE 388

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M    +  N  T   +V+G CK GN++ A++ +  M+    HP+ V + +L+  +   ++
Sbjct: 389 MCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSRE 448

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
                + L  M +  ++P VVTF+ +M+ +  +G++   +++   M++ GI P+   ++ 
Sbjct: 449 MVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNS 508

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L K Y      +    I   M   GV P+   +  +I G C A  M+ A  ++  M   G
Sbjct: 509 LIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 568

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
            N  + +Y  L+ G+ + K+   A EL + M  +G+   +    + AD
Sbjct: 569 FNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 616



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 180/381 (47%), Gaps = 1/381 (0%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           +L   GK  EA  +   +I EG  P  + YTTL+    +     S   L  +++K  + P
Sbjct: 232 LLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISP 291

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D I + A+I    ++G V EA K+F +M     +P   TY  LI GY   GK +E+  L 
Sbjct: 292 DFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLH 351

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             M Q   + PN  TY  L    C    ++ A  ++++M   G++ +  TYN+L     +
Sbjct: 352 NQMLQ-MGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCK 410

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G   +A +++ +M+     P+  T   ++  YCK   M  A   L +M + E+ P +V 
Sbjct: 411 AGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVT 470

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           FN L+ GF      +  +K L  M E G+ P+  T+++++  +     M    EI+  M 
Sbjct: 471 FNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMC 530

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G+ PD + ++IL KG+ +A   ++A  +   M   G +  V  +  +I G+    K  
Sbjct: 531 AKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFL 590

Query: 363 RAMSIYEKMCEIGINPNLKTY 383
            A  ++E+M   G+  + + Y
Sbjct: 591 EARELFEQMRREGLVADREIY 611



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 156/299 (52%), Gaps = 1/299 (0%)

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           E    ++ +M   G++P+  TYN +     + G+   AE++L EM +  + P+      +
Sbjct: 205 EWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 264

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           + G+CK GN+  A R    M++ ++ P+ + + ++I G          DK    M    +
Sbjct: 265 IDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRL 324

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           +PD VT++ ++D +   G M +   + + M++ G+ P+I  ++ LA G  + GE   A  
Sbjct: 325 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 384

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +L  M + G+  N+  + ++++G C A  + +A+ + + M   G +P+  TY TL+  Y 
Sbjct: 385 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYC 444

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           ++++  RA ELL+ M ++ ++P   T  ++ + +   G+  + +++LK   E +  MPN
Sbjct: 445 KSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLE-KGIMPN 502



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 153/308 (49%), Gaps = 7/308 (2%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  EA  + N +++ G  P ++TYT L   L +     +   L+ ++ + G++ +   
Sbjct: 341 EGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYT 400

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N+++N   ++GN+D+A+K+ + M+ +G  P   TY TL+  Y    K  E ++  +L+ 
Sbjct: 401 YNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYC---KSREMVRAHELLR 457

Query: 127 Q--DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           Q  D+ ++P   T+N+L+  +C    +E+   ++  M+  GI P+A TYN+L + Y    
Sbjct: 458 QMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRN 517

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR-MKELEVHPNLVVF 243
                 ++   M    V P+  T  I++ G+CK  NM++A  FL+R M     +  +  +
Sbjct: 518 NMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW-FLHRDMVGKGFNLTVSSY 576

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+LIKGF   K      +    M   G+  D   ++   D     G M    E+ D+ ++
Sbjct: 577 NALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIE 636

Query: 304 AGIEPDIH 311
             +  DI 
Sbjct: 637 KCLVGDIQ 644


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 188/380 (49%), Gaps = 8/380 (2%)

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKD-SGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +P+++ +N +I      G V  A+ I ++M++  G  P   TY T+I G+  VG+ +E++
Sbjct: 511 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 570

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K+   M     VKP    YN L+  +C +  ++ A     +MV  G+     TYN L  A
Sbjct: 571 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 630

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
               G    A +++ EM    + P+  T  I+++G+CKEGN++ A+     M    V   
Sbjct: 631 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 690

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +V + +LI            DK        G++PD+V ++ ++++ S++G + +  EI  
Sbjct: 691 VVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG 750

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M K  I PD   ++ L +G    G   +A  ++  M + G+ P++V + T+ISG+    
Sbjct: 751 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKG 810

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST-I 418
            ++ A+ I  +M   G NP L TY  L+ G  +  Q   AE +++ M E G+ P  ST I
Sbjct: 811 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 870

Query: 419 QLVADSWRAIGLAREAKRVL 438
            L+       GL  E +R +
Sbjct: 871 SLIE------GLTTEDERAI 884



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 89/388 (22%), Positives = 184/388 (47%), Gaps = 42/388 (10%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG---- 59
           L   GKP  A      L+ +  RP  +TY T++A    + R ++ L ++ ++ + G    
Sbjct: 493 LCSAGKPARALE----LLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAP 548

Query: 60  ---------------------------------MKPDSILFNAMINACSESGNVDEAMKI 86
                                            +KP+++++NA+I    + G +D A+  
Sbjct: 549 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 608

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M + G   T +TYN L+      G+  E+ +L++ M   K + P+  TYNIL+   C
Sbjct: 609 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG-KGLAPDVFTYNILINGHC 667

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            + ++++A  +   M   G++   VTY  L  A ++ G+    +++  E     +RP+  
Sbjct: 668 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV 727

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               +++ +   GN++ A   +  M++  + P+ V +N+L++G   +   D   K +  M
Sbjct: 728 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 787

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            E G++PD+VT++T++  +S  G +     I ++M+  G  P +  ++ L +G  + G+ 
Sbjct: 788 TERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG 847

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISG 354
             AE+++  M + G+ P+   + ++I G
Sbjct: 848 DDAENMVKEMVENGITPDDSTYISLIEG 875



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 151/303 (49%), Gaps = 10/303 (3%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N L+G    +GK   A    + ++E G   T+ TY  LV AL    R      L+ ++  
Sbjct: 590 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 649

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+ PD   +N +IN   + GNV +A++IF+ M   G + T  TY  LI      G+ +E
Sbjct: 650 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQE 709

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           + KL     + + ++P+   YN L+ +  +  +I+ A+ ++ +M    I PD VTYNTL 
Sbjct: 710 TDKLFDEAVR-RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 768

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
           R     G    A +++ EM    ++P+  T   ++SGY  +G+++DA+R    M     +
Sbjct: 769 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 828

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P L+ +N+LI+G       D  +  +  M E G+ PD  T+ ++++     GL  + +  
Sbjct: 829 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE-----GLTTEDERA 883

Query: 298 FDD 300
            DD
Sbjct: 884 IDD 886



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/407 (21%), Positives = 171/407 (42%), Gaps = 49/407 (12%)

Query: 45  FKSILSLISKVEKDGMKPD-----SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTT 99
           FKS+LS    +    + P      S L N ++ A +       +++++ +MK      +T
Sbjct: 393 FKSVLSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPIST 452

Query: 100 STYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVY 159
           ++ + L+    +      +  L   M + + +     T+NI++R  CS      A  ++ 
Sbjct: 453 ASLHPLLSALPSA----PAFALFADMFRLR-LPLCTTTFNIMLRHLCSAGKPARALELLR 507

Query: 160 KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM-QNNQVRPNERTCGIIVSGYCKE 218
           +M     +P+AVTYNT+   +   G    A  ++ EM +   + PN+ T G ++SG+CK 
Sbjct: 508 QMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 563

Query: 219 GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTF 278
           G +++A++    M              L KG                     VKP+ V +
Sbjct: 564 GRVDEAVKVFDEM--------------LTKG--------------------EVKPEAVMY 589

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           + ++  +   G +       D MV+ G+   +  +++L       G   +A  ++  M  
Sbjct: 590 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 649

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            G+ P+V  +  +I+G C    +++A+ I+E M   G+   + TY  L++   +  Q   
Sbjct: 650 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQE 709

Query: 399 AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
            ++L      +G+RP       + +S    G    A  ++   E+ R
Sbjct: 710 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 756


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 202/414 (48%), Gaps = 23/414 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ILV  G       ++  L+  G  P L+T+  L+    +  +    L  +  +++  +
Sbjct: 34  LDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSV 93

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD  +FN +I+   + GN D+A+K+F+ M+ S   P   TYNT+I G    G  E++ +
Sbjct: 94  APDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARE 153

Query: 121 LL-QLMSQDKNVKPNDRTYNILVRAW-CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           LL +++ +     P+  TYN L+ A  C    +EEA  ++  M  +G  PD +TYN++  
Sbjct: 154 LLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIH 213

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           A    G    A ++L  M      P+  T   ++ G+CK G +  A+  L  M    + P
Sbjct: 214 ALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILP 270

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGK-- 293
           +++ +  L+ G   +     V  A  L+EE    G  PDV+ +++++D    +G + +  
Sbjct: 271 DVITYTILVNGLCRVGQ---VQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAH 327

Query: 294 -------CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
                   +EI  +MV   + P +  ++I+  G ++ G   KA S+++ +   G  P+VV
Sbjct: 328 KLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVV 387

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY---GEAKQPW 397
            + T+I G C A +++ A  + ++M  +G  PN  T  ++++G    G     W
Sbjct: 388 TYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAW 441



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 194/391 (49%), Gaps = 16/391 (4%)

Query: 56  EKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKP 115
           E+DG K D   +N +++   +SG+     K+++ +  SGC P   T+  LI+G    G+ 
Sbjct: 19  EQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78

Query: 116 EESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
             +L+ L+ + +  +V P+   +N L+       + ++A  +   M +S + PD  TYNT
Sbjct: 79  TRALEFLRALDE-FSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNT 137

Query: 176 LARAYAQYGETYRAEQMLFEM--QNNQVRPNERTCGIIV-SGYCKEGNMEDAMRFLYRMK 232
           +     + G   +A ++L EM  +  +  P+  T   ++ +G CK+G++E+A+  L  MK
Sbjct: 138 VISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMK 197

Query: 233 ELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMG 292
                P+++ +NS+I        +  V +A  +++     PD+VTF+T++D +  AG++ 
Sbjct: 198 LAGPAPDVITYNSIIHALCV---AGRVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLP 254

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           +  E+ ++M +  I PD+  ++IL  G  R G+ Q A  +L  + + G  P+V+ +T+++
Sbjct: 255 RALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLV 314

Query: 353 SGWCNA---------VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
            G C +         VK   A  I  +M  I + P L TY  +L G  +     +A  L+
Sbjct: 315 DGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLI 374

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
             +  +G  P   T   + D        REA
Sbjct: 375 SDLVARGYVPDVVTYNTLIDGLCKANRVREA 405



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 198/429 (46%), Gaps = 22/429 (5%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK-- 61
           L   G P +A  +F  +      P + TY T+++ L +    +    L+ ++ + G K  
Sbjct: 107 LFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSA 166

Query: 62  PDSILFNAMINA-CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           PD + +N +INA   + G+V+EA++I   MK +G  P   TYN++I      G+  E+ +
Sbjct: 167 PDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAE 226

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+ MS      P+  T+N L+  +C    +  A  V+ +M    I PD +TY  L    
Sbjct: 227 ILKTMS----CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGL 282

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH--- 237
            + G+   A  +L E+      P+      +V G CK G +E+A + +  M   E+    
Sbjct: 283 CRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEM 342

Query: 238 ------PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSA 288
                 P L  +N ++ G   IKD   + KA++L+ +    G  PDVVT++T++D    A
Sbjct: 343 VSINMVPPLFTYNIVLGGL--IKDG-SISKAVSLISDLVARGYVPDVVTYNTLIDGLCKA 399

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
             + +  ++ D+M   G  P+      +  G  R G    A S++  M +    PNVV++
Sbjct: 400 NRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVY 459

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           T++I G C + +M  A  + + M   G+  +   Y  L+       +   A  +   M  
Sbjct: 460 TSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVA 519

Query: 409 KGVRPKKST 417
           +G  P  ST
Sbjct: 520 RGFLPDGST 528



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 155/332 (46%), Gaps = 12/332 (3%)

Query: 114 KPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY 173
           +P+ +++      +    K +  +YN L+              V   ++ SG  P+ VT+
Sbjct: 6   RPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTF 65

Query: 174 NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
             L R   + G+  RA + L  +    V P+      ++ G  K+GN + A++    M+ 
Sbjct: 66  KILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMES 125

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVK--PDVVTFSTIMDAW-SS 287
             V+P++  +N++I G      S  ++KA  L+EE    G K  PD+VT++T+++A    
Sbjct: 126 SRVNPDIFTYNTVISGLC---KSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICK 182

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
            G + +  EI D M  AG  PD+  ++ +      AG   +A  IL +M      P++V 
Sbjct: 183 DGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVT 239

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           F T++ G+C A  + RA+ + E+MC   I P++ TY  L+ G     Q   A  LL+ + 
Sbjct: 240 FNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIV 299

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            +G  P       + D     G   EA +++K
Sbjct: 300 RQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVK 331



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 1/176 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+  G   +A  + + L+  G+ P ++TY TL+  L +  R +    L  ++   G  P+
Sbjct: 361 LIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPN 420

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +   +++      G VD+A  +  +M      P    Y +LI G     + +++  +L 
Sbjct: 421 DVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLD 480

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            M + + V  +D  Y  L+ +      + EA  +  +MVA G  PD  T  TL  A
Sbjct: 481 AM-RGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEA 535


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 211/452 (46%), Gaps = 36/452 (7%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   +  + F  + E G      +Y  L+  L +    +  L +  ++  +G+KP    
Sbjct: 172 RGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKT 231

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F+A++ A  +  + +    + ++M+  G KP   TY   I+  G  G+ +E+ ++++ M 
Sbjct: 232 FSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRM- 290

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +D    P+  TY +L+ A C+   +++A  +  KM AS  +PD VTY T+   ++  G+ 
Sbjct: 291 EDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDL 350

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            R ++   EM+ +   P+  T  I+V+  CK GN+++A   L  M++  V PNL  +N+L
Sbjct: 351 GRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTL 410

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL---------------- 290
           I G L +   D        ME  GV P   T+   +D +  +G                 
Sbjct: 411 ISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGI 470

Query: 291 ----------------MGKCQE---IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
                           MG+ +E   IF+ +   G+ PD   ++++ K Y +AG+  +A  
Sbjct: 471 APNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIE 530

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +L+ M +    P++++  ++I+    A ++  A  ++ ++ ++ + P + TY TL+ G G
Sbjct: 531 LLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLG 590

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           +  Q  RA EL   M   G  P   T   + D
Sbjct: 591 KEGQVQRAMELFASMTGNGCPPNTITFNTILD 622



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 182/389 (46%), Gaps = 2/389 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   GK  +A  +F  +    H+P  +TY T++   +       +    S++E DG 
Sbjct: 306 IDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGY 365

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I F  ++NA  ++GN+DEA  +   M+  G  P   TYNTLI G   V + +++L 
Sbjct: 366 APDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALD 425

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M +   V P   TY + +  +      ++A     KM   GI P+ V  N    + 
Sbjct: 426 LFNNM-ETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSL 484

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+ G    A+ +   +++N + P+  T  +++  Y K G +++A+  L  M E +  P++
Sbjct: 485 AEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDI 544

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +V NSLI         D   K    +++  + P VVT++T++      G + +  E+F  
Sbjct: 545 IVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFAS 604

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G  P+   F+ +     +  E   A  +L  M      P+V+ F T+I G     +
Sbjct: 605 MTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKR 664

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           +  A+ ++ +M ++ + P+  T  TLL G
Sbjct: 665 VSDAIWLFHQMKKM-LTPDCVTLCTLLPG 692



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/474 (23%), Positives = 212/474 (44%), Gaps = 42/474 (8%)

Query: 3   ILVGKGKPHEAHYIFNCLIEE----GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           ++V  GK  +   +   L+EE    G +P + TYT  +  L R  R      ++ ++E D
Sbjct: 235 LMVATGKRRDTETV-KSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDD 293

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKP 115
           G  PD + +  +I+A   +G +D+AM++F KMK S  KP   TY T++  +   G++G+ 
Sbjct: 294 GCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRV 353

Query: 116 --------------------------------EESLKLLQLMSQDKNVKPNDRTYNILVR 143
                                           +E+  LL +M + + V PN  TYN L+ 
Sbjct: 354 KEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRK-QGVLPNLHTYNTLIS 412

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
                N +++A ++   M   G+ P A TY      Y + G + +A +   +M+   + P
Sbjct: 413 GLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAP 472

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N   C   +    + G + +A     R+K   + P+ V +N ++K +      D   + L
Sbjct: 473 NIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELL 532

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           + M E   +PD++  +++++    AG + +  ++F  +    + P +  ++ L  G  + 
Sbjct: 533 SDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKE 592

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+ Q+A  +  SM   G  PN + F T++   C   ++  A+ +  KM  +   P++ T+
Sbjct: 593 GQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTF 652

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
            T++ G    K+   A  L   M +K + P   T+  +       GL  +A ++
Sbjct: 653 NTIIHGLVIEKRVSDAIWLFHQM-KKMLTPDCVTLCTLLPGVVKNGLMEDAFKI 705



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/472 (23%), Positives = 210/472 (44%), Gaps = 45/472 (9%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  IFN L   G  P  +TY  ++   ++  +    + L+S + ++  +PD I+ 
Sbjct: 488 GRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVI 547

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N++IN   ++G VDEA K+F ++KD    PT  TYNTLI G G  G+ + +++L   M+ 
Sbjct: 548 NSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTG 607

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +    PN  T+N ++   C  + ++ A  ++YKM      PD +T+NT+           
Sbjct: 608 N-GCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVS 666

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR----FLYRMKELEVHPNLVVF 243
            A  +  +M+   + P+  T   ++ G  K G MEDA +    F++R   L V+ +   +
Sbjct: 667 DAIWLFHQMKK-MLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHR---LGVYVDRRFW 722

Query: 244 NSLIKGFLDIKDS-----------------DG-----VDKALT--------------LME 267
             L+ G L    +                 DG     + K L                 +
Sbjct: 723 EDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTK 782

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
           E GVKP + +++ +++ +           +F +M  AG  PD+  +++L   + ++G+  
Sbjct: 783 ELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKIN 842

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           +   +   M      PN +    +I+    +  + +A+ ++  +     +P   TY  LL
Sbjct: 843 ELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLL 902

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            G  ++ +   A+EL + M + G RP  +   ++ + +   G    A  + K
Sbjct: 903 DGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFK 954



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/430 (23%), Positives = 183/430 (42%), Gaps = 36/430 (8%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +FN +  +  +  L TY  +   L  +   +       K+ + G   ++  +N +I+   
Sbjct: 146 VFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLL 205

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           +SG   EA++++++M   G KP+  T++ L+   G     E    LL+ M +   +KPN 
Sbjct: 206 QSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEM-ESLGLKPNI 264

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY I +R       I+EA  ++ +M   G  PD VTY                      
Sbjct: 265 YTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYT--------------------- 303

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
                         +++   C  G ++DAM    +MK     P+ V + +++  F D  D
Sbjct: 304 --------------VLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGD 349

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
              V +  + ME  G  PDV+TF+ +++A   AG + +   + D M K G+ P++H ++ 
Sbjct: 350 LGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNT 409

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  G +R      A  +  +M   GV P    +   I  +  + +  +A+  +EKM   G
Sbjct: 410 LISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRG 469

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           I PN+      L+   E  +   A+ +   ++  G+ P   T  ++   +   G   EA 
Sbjct: 470 IAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAI 529

Query: 436 RVLKSAEEDR 445
            +L    E++
Sbjct: 530 ELLSDMSENQ 539



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 170/331 (51%), Gaps = 9/331 (2%)

Query: 22   EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
            E G +PTL +Y  L+         +   +L ++++  G  PD   +N +++A  +SG ++
Sbjct: 783  ELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKIN 842

Query: 82   EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-QLMSQDKNVKPNDRTYNI 140
            E  +++++M  S CKP T T+N +I         +++L L   L+S D    P   TY  
Sbjct: 843  ELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGD--FSPTPCTYGP 900

Query: 141  LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
            L+        +EEA  +  +MV  G +P+   YN L   + + G+   A ++   M    
Sbjct: 901  LLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREG 960

Query: 201  VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
            +RP+ ++   +V   C+ G ++DA+ +  ++K+  ++ + + +N +I G   +  S  ++
Sbjct: 961  IRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDG---LGRSHRIE 1017

Query: 261  KALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
            +ALTL +E    G+ PD+ T+++++     AG++ +  ++++++   G+EP++  ++ L 
Sbjct: 1018 EALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALI 1077

Query: 318  KGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
            +GY  +G    A ++   M   G  PN   F
Sbjct: 1078 RGYSMSGNSDSAYAVYKRMMVGGCSPNTGTF 1108



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 171/356 (48%), Gaps = 8/356 (2%)

Query: 35   LVAALTRQKRFKSILSLISKVEKD-GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS 93
            ++  L + K+     S+  +  K+ G+KP    +N +I       N + A  +F +MK++
Sbjct: 760  IIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNA 819

Query: 94   GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
            GC P   TYN L+  +G  GK  E  +L + M    + KPN  T+NI++      NS+++
Sbjct: 820  GCAPDVFTYNLLLDAHGKSGKINELFELYEQMIC-SSCKPNTITHNIIIANLVKSNSLDK 878

Query: 154  AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
            A ++ Y +V+    P   TY  L     + G    A+++  EM +   RPN     I+++
Sbjct: 879  ALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILIN 938

Query: 214  GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---G 270
            G+ K G++  A     RM    + P+L  + SL+    +   +  VD AL   E+    G
Sbjct: 939  GFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCE---AGRVDDALHYFEKLKQTG 995

Query: 271  VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
            +  D + ++ ++D    +  + +   ++D+M   GI PD+  ++ L      AG  ++A 
Sbjct: 996  LYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAG 1055

Query: 331  SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             +   ++  G+ PNV  +  +I G+  +     A ++Y++M   G +PN  T+  L
Sbjct: 1056 KLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 172/371 (46%), Gaps = 1/371 (0%)

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N M+        V + + +F  M++   K   +TY  + KG    G   ++      M +
Sbjct: 128 NHMLEILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKM-R 186

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +     N  +YN L+          EA  +  +MV  G++P   T++ L  A  +  +T 
Sbjct: 187 EAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTE 246

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
             + +L EM++  ++PN  T  I +    + G +++A R + RM++    P++V +  LI
Sbjct: 247 TVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLI 306

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
                    D   +    M+    KPD VT+ T++D +S  G +G+ +E + +M   G  
Sbjct: 307 DALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYA 366

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+  F+IL     +AG   +A  +L  MRK GV PN+  + T+ISG     ++  A+ +
Sbjct: 367 PDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDL 426

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           +  M  +G+ P   TY   +  YG++ +  +A E  + M+ +G+ P          S   
Sbjct: 427 FNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAE 486

Query: 428 IGLAREAKRVL 438
           +G  REAK + 
Sbjct: 487 MGRLREAKVIF 497



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 100/452 (22%), Positives = 207/452 (45%), Gaps = 43/452 (9%)

Query: 27   PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
            P ++T+ T++  L  +KR    + L  +++K  + PD +    ++    ++G +++A KI
Sbjct: 647  PDVLTFNTIIHGLVIEKRVSDAIWLFHQMKK-MLTPDCVTLCTLLPGVVKNGLMEDAFKI 705

Query: 87   FQK---------------------MKDSGCKPTTSTYNTLIKGY----GNVGKP------ 115
             +                      +  +G + T    + L+ G     G+V  P      
Sbjct: 706  AEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLC 765

Query: 116  --EESL---KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
              +++L    +    +++  VKP   +YN L+  +   ++ E AWN+  +M  +G  PD 
Sbjct: 766  KHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDV 825

Query: 171  VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
             TYN L  A+ + G+     ++  +M  +  +PN  T  II++   K  +++ A+   Y 
Sbjct: 826  FTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYD 885

Query: 231  MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE---FGVKPDVVTFSTIMDAWSS 287
            +   +  P    +  L+ G L    S  +++A  L EE   +G +P+   ++ +++ +  
Sbjct: 886  LVSGDFSPTPCTYGPLLDGLLK---SGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGK 942

Query: 288  AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
             G +    E+F  MV+ GI PD+  ++ L      AG    A      +++ G++ + + 
Sbjct: 943  TGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIA 1002

Query: 348  FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
            +  +I G   + +++ A+++Y++M   GINP+L TY +L+   G A    +A +L + ++
Sbjct: 1003 YNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQ 1062

Query: 408  EKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
              G+ P   T   +   +   G +  A  V K
Sbjct: 1063 FIGLEPNVFTYNALIRGYSMSGNSDSAYAVYK 1094



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 161/337 (47%), Gaps = 2/337 (0%)

Query: 83   AMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
            A  +F +  K+ G KPT  +YN LI+G+  V   E +  L   M ++    P+  TYN+L
Sbjct: 773  AQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEM-KNAGCAPDVFTYNLL 831

Query: 142  VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
            + A      I E + +  +M+ S  +P+ +T+N +     +     +A  + +++ +   
Sbjct: 832  LDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDF 891

Query: 202  RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
             P   T G ++ G  K G +E+A      M +    PN  ++N LI GF    D +   +
Sbjct: 892  SPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACE 951

Query: 262  ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
                M   G++PD+ ++++++     AG +      F+ + + G+  D   ++++  G  
Sbjct: 952  LFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLG 1011

Query: 322  RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
            R+   ++A ++   M+  G++P++  + ++I     A  +++A  +YE++  IG+ PN+ 
Sbjct: 1012 RSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVF 1071

Query: 382  TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            TY  L+ GY  +     A  + + M   G  P   T 
Sbjct: 1072 TYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTF 1108



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 134/277 (48%), Gaps = 7/277 (2%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            GK +E   ++  +I    +P  IT+  ++A L +       L L   +      P    +
Sbjct: 839  GKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTY 898

Query: 68   NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
              +++   +SG ++EA ++F++M D GC+P  + YN LI G+G  G    + +L + M +
Sbjct: 899  GPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVR 958

Query: 128  DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            +  ++P+ ++Y  LV   C    +++A +   K+  +G+  D++ YN +       G ++
Sbjct: 959  E-GIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDG---LGRSH 1014

Query: 188  RAEQMLF---EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
            R E+ L    EMQ+  + P+  T   ++      G +E A +    ++ + + PN+  +N
Sbjct: 1015 RIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYN 1074

Query: 245  SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
            +LI+G+    +SD        M   G  P+  TF+ +
Sbjct: 1075 ALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 1/243 (0%)

Query: 4    LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            LV      +A  +F  L+     PT  TY  L+  L +  R +    L  ++   G +P+
Sbjct: 870  LVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPN 929

Query: 64   SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + ++N +IN   ++G+V+ A ++F++M   G +P   +Y +L+      G+ +++L   +
Sbjct: 930  NAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFE 989

Query: 124  LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
             + Q   +  +   YN+++      + IEEA  +  +M + GI PD  TYN+L       
Sbjct: 990  KLKQ-TGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVA 1048

Query: 184  GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            G   +A ++  E+Q   + PN  T   ++ GY   GN + A     RM      PN   F
Sbjct: 1049 GMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTF 1108

Query: 244  NSL 246
              L
Sbjct: 1109 AQL 1111



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 95/179 (53%), Gaps = 5/179 (2%)

Query: 2    NILV---GK-GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
            NIL+   GK G  + A  +F  ++ EG RP L +YT+LV  L    R    L    K+++
Sbjct: 934  NILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQ 993

Query: 58   DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
             G+  DSI +N MI+    S  ++EA+ ++ +M+  G  P   TYN+LI   G  G  E+
Sbjct: 994  TGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQ 1053

Query: 118  SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
            + KL + + Q   ++PN  TYN L+R +    + + A+ V  +M+  G  P+  T+  L
Sbjct: 1054 AGKLYEEL-QFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 211/447 (47%), Gaps = 26/447 (5%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P ++TY  L+    R+++      ++S +  +G  P   +FN++I+A   SG+   A K+
Sbjct: 332 PNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKL 391

Query: 87  FQKMKDSGCKPTTSTYNTLIKGY-GNVGKPEESLKLLQLMSQ------DKNVKPNDRTYN 139
            +KM D GC+P    YN LI G  GN   P  SL +L+L  +      D +V  N    +
Sbjct: 392 LKKMGDCGCQPGYVVYNILIGGICGNEKLP--SLDVLELAEKAYGEMLDAHVVLNKVNVS 449

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L R  C     E+A++++ +M++ G  PD  TY+ +        +   A  +  EM++N
Sbjct: 450 NLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSN 509

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            V P+  T  I++  +CK G ++ A ++   M      PN+V + +LI  +L  +     
Sbjct: 510 HVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSA 569

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV-KAGI------------ 306
           ++   +M   G  P+VVT++ ++D    +G + K  +I+  M   A I            
Sbjct: 570 NELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629

Query: 307 ---EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
              +P+I  +  L  G  +A + ++A  +L  M   G  PN +++  +I G+C   K+  
Sbjct: 630 NIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDE 689

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  ++ KM E G  PN+ TY +L+    + K+   A ++L  M E    P       + D
Sbjct: 690 AQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMID 749

Query: 424 SWRAIGLAREAKRVLKSAEEDRQSMPN 450
               +G   EA R++ S  E++   PN
Sbjct: 750 GLCKVGKTDEAYRLM-SMMEEKGCHPN 775



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 185/406 (45%), Gaps = 22/406 (5%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G GK  +A+ I   ++ +G  P   TY+ ++  L    +  +   L  +++ + + PD
Sbjct: 455 LCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPD 514

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +  +I++  + G + +A K F +M   GC P   TY  LI  Y    K   + +L +
Sbjct: 515 VFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFE 574

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           +M  +  + PN  TY  L+   C    IE+A  +  +M  +   PD              
Sbjct: 575 MMLSEGCI-PNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDV------------- 620

Query: 184 GETYRAEQMLFEMQNNQVR-PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                   M F++ +  +R PN  T G +V G CK   +++A   L  M      PN +V
Sbjct: 621 -------DMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIV 673

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +++LI GF  +   D      T M E G  P+V T+S+++D       +    ++   M+
Sbjct: 674 YDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRML 733

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           +    P++ +++ +  G  + G+  +A  +++ M + G HPNVV +T +I G+  A K+ 
Sbjct: 734 ENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVD 793

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           + + +  +M   G  PN  TY  L+     A     A +LL  M++
Sbjct: 794 KCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQ 839



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 199/445 (44%), Gaps = 33/445 (7%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           T    V  L +  R++  L+LI   EK+  K D++++  MI+   E+   +EAM    +M
Sbjct: 269 TLGCFVHLLCKAGRWREALALI---EKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRM 325

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
           + S C P   TY  L+ G     +     ++L +M  +    P+ R +N L+ A+C    
Sbjct: 326 RSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITE-GCYPSRRIFNSLIHAYCRSGD 384

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYA------QYGETYRAEQMLFEMQNNQVRPN 204
              A+ ++ KM   G QP  V YN L                  AE+   EM +  V  N
Sbjct: 385 YSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLN 444

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
           +     +    C  G  E A   +  M      P+   ++ +I G L   ++  VD A  
Sbjct: 445 KVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVI-GLL--CNASKVDNAFL 501

Query: 265 LMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           L EE     V PDV T++ ++D++   GL+ + ++ FD+MV+ G  P++  ++ L   Y+
Sbjct: 502 LFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYL 561

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM------CEIG 375
           +A +   A  +   M   G  PNVV +T +I G C + ++++A  IY +M       ++ 
Sbjct: 562 KARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVD 621

Query: 376 I----------NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           +          +PN+ TY  L+ G  +A +   A +LL VM  +G  P       + D +
Sbjct: 622 MYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGF 681

Query: 426 RAIGLAREAKRVLKSAEEDRQSMPN 450
             +G   EA+ V     E R   PN
Sbjct: 682 CKVGKLDEAQMVFTKMSE-RGYGPN 705



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 112/485 (23%), Positives = 211/485 (43%), Gaps = 58/485 (11%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA-C 74
           I + +I EG  P+   + +L+ A  R   +     L+ K+   G +P  +++N +I   C
Sbjct: 356 ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC 415

Query: 75  SE----------------------------------------SGNVDEAMKIFQKMKDSG 94
                                                     +G  ++A  I ++M   G
Sbjct: 416 GNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKG 475

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
             P TSTY+ +I    N  K + +  L + M  + +V P+  TY IL+ ++C    +++A
Sbjct: 476 FIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSN-HVVPDVFTYTILIDSFCKVGLLQQA 534

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
                +MV  G  P+ VTY  L  AY +  +   A ++   M +    PN  T   ++ G
Sbjct: 535 RKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDG 594

Query: 215 YCKEGNMEDAMRFLYRMK------ELEVH----------PNLVVFNSLIKGFLDIKDSDG 258
           +CK G +E A +   RM+      +++++          PN+  + +L+ G         
Sbjct: 595 HCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKE 654

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
               L +M   G +P+ + +  ++D +   G + + Q +F  M + G  P+++ +S L  
Sbjct: 655 ARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
              +      A  +L+ M +    PNV+++T +I G C   K   A  +   M E G +P
Sbjct: 715 RLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP 774

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           N+ TY  ++ G+G+A +  +  EL++ M  KG  P   T +++ +   A GL  +A ++L
Sbjct: 775 NVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834

Query: 439 KSAEE 443
              ++
Sbjct: 835 DEMKQ 839



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/421 (23%), Positives = 193/421 (45%), Gaps = 17/421 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L    K   A  +F  +      P + TYT L+ +  +    +       ++ +DG 
Sbjct: 487 IGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGC 546

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + + A+I+A  ++  +  A ++F+ M   GC P   TY  LI G+   G+ E++ +
Sbjct: 547 APNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQ 606

Query: 121 LLQLMS--------------QDKNVK-PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
           +   M                D N++ PN  TY  LV   C  + ++EA +++  M   G
Sbjct: 607 IYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEG 666

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
            +P+ + Y+ L   + + G+   A+ +  +M      PN  T   ++    K+  ++ A+
Sbjct: 667 CEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLAL 726

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           + L RM E    PN++++  +I G   +  +D   + +++MEE G  P+VVT++ ++D +
Sbjct: 727 KVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGF 786

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
             AG + KC E+   M   G  P+   + +L      AG    A  +L  M++     ++
Sbjct: 787 GKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHM 846

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
             +  VI G+     +  ++ + +++ E    P +  Y  L+  + +A +   A EL + 
Sbjct: 847 AGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKX 904

Query: 406 M 406
           M
Sbjct: 905 M 905



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/339 (23%), Positives = 157/339 (46%), Gaps = 38/339 (11%)

Query: 21  IEEGH--RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESG 78
           I++G+   P + TY  LV  L +  + K    L+  +  +G +P+ I+++A+I+   + G
Sbjct: 626 IDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVG 685

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
            +DEA  +F KM + G  P   TY++LI       + + +LK+L  M ++ +  PN   Y
Sbjct: 686 KLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN-SCAPNVIIY 744

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
             ++   C     +EA+ ++  M   G  P+ VTY  +   + + G+  +  +++ +M  
Sbjct: 745 TEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGA 804

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF-------L 251
               PN  T  ++++  C  G ++DA + L  MK+     ++  +  +I+GF       L
Sbjct: 805 KGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISL 864

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVT----------------------------FSTIMD 283
            + D    + A+ ++  + +  D                               +S++++
Sbjct: 865 GLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIE 924

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           + S A  + K  E++ DM+K G  P++ +F  L KG +R
Sbjct: 925 SLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIR 963



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/439 (22%), Positives = 175/439 (39%), Gaps = 67/439 (15%)

Query: 98  TTSTYNTLIKGYGNVGK---PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
           T   Y+ L++  G  G    PE+ L+  ++  +DK +    +  N+L+R  C +N +   
Sbjct: 161 TGPVYHALLEVLGCGGNDRVPEQFLR--EIRDEDKEIL--GKLLNVLIRK-CCRNGL--- 212

Query: 155 WNVVYKMVAS----GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           WNV  + +      G +P  +TYN L R + +      A  +  EM ++    +  T G 
Sbjct: 213 WNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGC 272

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
            V   CK G   +A+  +   ++ E   + V++  +I G  +    +     L+ M    
Sbjct: 273 FVHLLCKAGRWREALALI---EKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSS 329

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
             P+VVT+  ++        +G+C+ I   M+  G  P   +F+ L   Y R+G+   A 
Sbjct: 330 CIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAY 389

Query: 331 SILTSMRKYGVHPNVVMFTTVISG------------------------------------ 354
            +L  M   G  P  V++  +I G                                    
Sbjct: 390 KLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVS 449

Query: 355 -----WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
                 C A K ++A SI  +M   G  P+  TY  ++     A +   A  L + M+  
Sbjct: 450 NLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSN 509

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIA-VESIHRKQNLSA 468
            V P   T  ++ DS+  +GL ++A++       D    PN     A + +  + + +S+
Sbjct: 510 HVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD-GCAPNVVTYTALIHAYLKARKMSS 568

Query: 469 SNSTFLQ------IPGVVS 481
           +N  F        IP VV+
Sbjct: 569 ANELFEMMLSEGCIPNVVT 587


>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
 gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
          Length = 677

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 229/477 (48%), Gaps = 38/477 (7%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+      IF+ ++ EG +P ++ Y +L+ A   +   +  L++ + ++K+G++PD + +
Sbjct: 202 GQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSY 261

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            +++NA   S   ++A ++F KMK + CKP   +YN LI  YG+ G  +E++ LL  M +
Sbjct: 262 TSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEK 321

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D  ++P+  + + L+ A      I     ++    + GI  + V YN+  ++Y  +G+  
Sbjct: 322 D-GIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYE 380

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A ++   M+ + V+P+  T  I++SG  K G   +++RF   M + +V     V++SLI
Sbjct: 381 KALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLI 440

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             ++        +   + M++ G  PDV+T++T++ A+++ G   +  ++F +M   GI 
Sbjct: 441 YSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIP 500

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN------VVMFTTVISGWCNAVKM 361
           PD  + S L + + + GEP++   ++  M+K  +  N      ++   T+I  W  A +M
Sbjct: 501 PDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEM 560

Query: 362 -----------------------------QRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
                                        +  M ++ KM        L TY  +L     
Sbjct: 561 IEYLDSSLSSISVGTLNHVLNFLGKCGKTENMMKLFYKMVTSCSTVGLSTYAVVLRNLLV 620

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADS-WRAIGLAREAKRVLK-SAEEDRQS 447
             +  +  E+LQ ME+ GV P     Q V    WR  G+   A    K S+  D+Q+
Sbjct: 621 VGKWRKYIEVLQWMEDSGVHPTLYMFQNVLPYIWRENGMDFAATMQEKISSLRDKQT 677



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 110/441 (24%), Positives = 213/441 (48%), Gaps = 39/441 (8%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           + E G  P L+T+  +++AL    ++   +S    ++   +  D+   N +I+   + G 
Sbjct: 107 MTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQ 166

Query: 80  VDEAMKIFQKMKD--SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT 137
             EA+++F  M++  + C P   TY +++  Y   G+ E    +  LM  +  VKPN   
Sbjct: 167 CGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAE-GVKPNIVA 225

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           YN L+ A+ S+    EA  +   +  +G++PD V+Y +L  AY +  +  +A ++  +M+
Sbjct: 226 YNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMK 285

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP------------------- 238
            N  +PN+ +   ++  Y   G +++A+  L+ M++  + P                   
Sbjct: 286 KNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQIT 345

Query: 239 ----------------NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIM 282
                           N V +NS IK +L   D +   +  T M E  VKPD VT++ ++
Sbjct: 346 RIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILI 405

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
              S  G   +    F+DMV + +     V+S L   Y++ G+  +AES  +SM+K G  
Sbjct: 406 SGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCF 465

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           P+V+ +TT+I  +      +RA  ++++M   GI P+     +L+  + +  +P R  +L
Sbjct: 466 PDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQL 525

Query: 403 LQVMEEKGV-RPKKSTIQLVA 422
           ++ M++K +   +KS  +++A
Sbjct: 526 MEFMKKKSIPLNQKSYFEIIA 546



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 201/420 (47%), Gaps = 7/420 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT  TY  ++ A      +K  L L  K+ ++G+ PD +  N +++A        +A+  
Sbjct: 79  PTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISY 138

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR-TYNILVRAW 145
           F+ MK +     T T N +I     +G+  E+++L   M + +   P D  TY  ++ ++
Sbjct: 139 FEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSY 198

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C    +E    +   MVA G++P+ V YN+L  AYA  G    A  +   ++ N +RP+ 
Sbjct: 199 CIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDI 258

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD---IKDSDGVDKA 262
            +   +++ Y +    E A     +MK+    PN V +N+LI  +     +K++ G+   
Sbjct: 259 VSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGL--- 315

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           L  ME+ G++PDVV+ ST++ A      + + + I +     GI+ +   ++   K Y+ 
Sbjct: 316 LHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLS 375

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G+ +KA  + TSMR+  V P+ V +  +ISG     K   ++  +E M +  ++   + 
Sbjct: 376 FGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEV 435

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           Y +L++ Y +  +   AE     M++ G  P   T   +  ++ A G  + A  + K  E
Sbjct: 436 YSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEME 495



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 173/349 (49%), Gaps = 5/349 (1%)

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
           ++  MI   +    VD+A  +F +M++  CKP    YN+LI  +   G+   ++ +++ M
Sbjct: 13  IYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDM 72

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
            +   + P   TYN ++ A  +  + ++A  +  KM  +G+ PD VT+N +  A    G 
Sbjct: 73  LRAA-IPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKN-GA 130

Query: 186 TYRAEQMLFE-MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH--PNLVV 242
            Y      FE M+   V  +  T  II+    K G   +A+     M+E      P++V 
Sbjct: 131 QYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVT 190

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           + S++  +      +       LM   GVKP++V +++++ A++S G+  +   IF+ + 
Sbjct: 191 YTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIK 250

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           K G+ PDI  ++ L   Y R+ +P+KA  +   M+K    PN V +  +I  + +A  ++
Sbjct: 251 KNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLK 310

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
            A+ +  +M + GI P++ +  TLL   G  +Q  R E +L+    +G+
Sbjct: 311 EAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGI 359



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 105/444 (23%), Positives = 208/444 (46%), Gaps = 3/444 (0%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           Y  ++    R  +      L  ++++   KPD+ ++N++I+A S +G    A+ I + M 
Sbjct: 14  YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
            +   PT +TYN +I   G  G  +++L+L + M+++  V P+  T+NI++ A  +    
Sbjct: 74  RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTEN-GVGPDLVTHNIVLSALKNGAQY 132

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR--PNERTCG 209
            +A +    M  + +  D  T N +     + G+   A ++   M+  + +  P+  T  
Sbjct: 133 SKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYT 192

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            I+  YC  G +E+       M    V PN+V +NSL+  +              L+++ 
Sbjct: 193 SIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKN 252

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G++PD+V+++++++A+  +    K +E+F+ M K   +P+   ++ L   Y  AG  ++A
Sbjct: 253 GLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEA 312

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             +L  M K G+ P+VV  +T+++      ++ R  +I E     GI+ N   Y + +  
Sbjct: 313 VGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKS 372

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMP 449
           Y       +A EL   M E  V+P   T  ++      +G   E+ R  +   + + S  
Sbjct: 373 YLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSST 432

Query: 450 NKKDEIAVESIHRKQNLSASNSTF 473
            +     + S  ++  LS + STF
Sbjct: 433 KEVYSSLIYSYIKQGKLSEAESTF 456



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 161/324 (49%), Gaps = 9/324 (2%)

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           +QD     ND  Y +++R +   N +++A  + ++M     +PDA  YN+L  A+++ G+
Sbjct: 3   NQDNYCARND-IYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQ 61

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A  ++ +M    + P   T   +++     GN + A+    +M E  V P+LV  N 
Sbjct: 62  WRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNI 121

Query: 246 LIKGFLDIKDSDGVDKALT---LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM- 301
           ++     +K+     KA++   +M+   V  D  T + I+      G  G+  E+F+ M 
Sbjct: 122 VLSA---LKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMR 178

Query: 302 -VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
             +    PD+  ++ +   Y   G+ +  ++I   M   GV PN+V + +++  + +   
Sbjct: 179 ERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGM 238

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
            + A++I+  + + G+ P++ +Y +LL  YG + QP +A E+   M++   +P K +   
Sbjct: 239 HREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNA 298

Query: 421 VADSWRAIGLAREAKRVLKSAEED 444
           + D++ + G+ +EA  +L   E+D
Sbjct: 299 LIDAYGSAGMLKEAVGLLHEMEKD 322


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 188/380 (49%), Gaps = 8/380 (2%)

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKD-SGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +P+++ +N +I      G V  A+ I ++M++  G  P   TY T+I G+  VG+ +E++
Sbjct: 516 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 575

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K+   M     VKP    YN L+  +C +  ++ A     +MV  G+     TYN L  A
Sbjct: 576 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 635

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
               G    A +++ EM    + P+  T  I+++G+CKEGN++ A+     M    V   
Sbjct: 636 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 695

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +V + +LI            DK        G++PD+V ++ ++++ S++G + +  EI  
Sbjct: 696 VVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG 755

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M K  I PD   ++ L +G    G   +A  ++  M + G+ P++V + T+ISG+    
Sbjct: 756 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKG 815

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST-I 418
            ++ A+ I  +M   G NP L TY  L+ G  +  Q   AE +++ M E G+ P  ST I
Sbjct: 816 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 875

Query: 419 QLVADSWRAIGLAREAKRVL 438
            L+       GL  E +R +
Sbjct: 876 SLIE------GLTTEDERAI 889



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/388 (22%), Positives = 184/388 (47%), Gaps = 42/388 (10%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG---- 59
           L   GKP  A      L+ +  RP  +TY T++A    + R ++ L ++ ++ + G    
Sbjct: 498 LCSAGKPARALE----LLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAP 553

Query: 60  ---------------------------------MKPDSILFNAMINACSESGNVDEAMKI 86
                                            +KP+++++NA+I    + G +D A+  
Sbjct: 554 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 613

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M + G   T +TYN L+      G+  E+ +L++ M   K + P+  TYNIL+   C
Sbjct: 614 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG-GKGLAPDVFTYNILINGHC 672

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            + ++++A  +   M   G++   VTY  L  A ++ G+    +++  E     +RP+  
Sbjct: 673 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV 732

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               +++ +   GN++ A   +  M++  + P+ V +N+L++G   +   D   K +  M
Sbjct: 733 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 792

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            E G++PD+VT++T++  +S  G +     I ++M+  G  P +  ++ L +G  + G+ 
Sbjct: 793 TERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG 852

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISG 354
             AE+++  M + G+ P+   + ++I G
Sbjct: 853 DDAENMVKEMVENGITPDDSTYISLIEG 880



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 151/303 (49%), Gaps = 10/303 (3%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N L+G    +GK   A    + ++E G   T+ TY  LV AL    R      L+ ++  
Sbjct: 595 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 654

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+ PD   +N +IN   + GNV +A++IF+ M   G + T  TY  LI      G+ +E
Sbjct: 655 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQE 714

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           + KL     + + ++P+   YN L+ +  +  +I+ A+ ++ +M    I PD VTYNTL 
Sbjct: 715 TDKLFDEAVR-RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 773

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
           R     G    A +++ EM    ++P+  T   ++SGY  +G+++DA+R    M     +
Sbjct: 774 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 833

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P L+ +N+LI+G       D  +  +  M E G+ PD  T+ ++++     GL  + +  
Sbjct: 834 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE-----GLTTEDERA 888

Query: 298 FDD 300
            DD
Sbjct: 889 IDD 891



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/407 (21%), Positives = 171/407 (42%), Gaps = 49/407 (12%)

Query: 45  FKSILSLISKVEKDGMKPD-----SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTT 99
           FKS+LS    +    + P      S L N ++ A +       +++++ +MK      +T
Sbjct: 398 FKSVLSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPIST 457

Query: 100 STYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVY 159
           ++ + L+    +      +  L   M + + +     T+NI++R  CS      A  ++ 
Sbjct: 458 ASLHPLLSALPSA----PAFALFADMFRLR-LPLCTTTFNIMLRHLCSAGKPARALELLR 512

Query: 160 KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM-QNNQVRPNERTCGIIVSGYCKE 218
           +M     +P+AVTYNT+   +   G    A  ++ EM +   + PN+ T G ++SG+CK 
Sbjct: 513 QMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 568

Query: 219 GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTF 278
           G +++A++    M              L KG                     VKP+ V +
Sbjct: 569 GRVDEAVKVFDEM--------------LTKG--------------------EVKPEAVMY 594

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           + ++  +   G +       D MV+ G+   +  +++L       G   +A  ++  M  
Sbjct: 595 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 654

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            G+ P+V  +  +I+G C    +++A+ I+E M   G+   + TY  L++   +  Q   
Sbjct: 655 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQE 714

Query: 399 AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
            ++L      +G+RP       + +S    G    A  ++   E+ R
Sbjct: 715 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 761


>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
 gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
 gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
          Length = 410

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 192/383 (50%), Gaps = 8/383 (2%)

Query: 46  KSILSLISKVEKDG-MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNT 104
           +S L+++++  K G    D     A+++ C +SG+V EA ++F  M   G  P   TY  
Sbjct: 19  RSALAVLARGTKSGDAALDVAACTALVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTA 78

Query: 105 LIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS 164
           LI GY   G  E    L   M +D  V+PN  TYN L+  WC     + A  +  +M   
Sbjct: 79  LINGYFVRGHREMGFALFAEMRRD-GVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVK 137

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           G+  + V+YN L     ++ +   A Q+   M+   +RP+  T  +++ GY K G M +A
Sbjct: 138 GVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANA 197

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
           + F  +MK   + P++V +N LI GF  ++D     +A   M+E G+ P  VT++ ++ A
Sbjct: 198 LHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAA 257

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           ++    M +   +  +M KAG+E D+  + +L       G+   A  +  SM   GV PN
Sbjct: 258 FAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPN 317

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET---LLWGYGEAKQPWRAEE 401
            V++  +I G+       +A+ +  +M + G+ PN+ +Y     LL   G+ ++   AE 
Sbjct: 318 SVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQE---AEA 374

Query: 402 LLQVMEEKGVRPKKSTIQLVADS 424
           L+  ME  G++  ++  +++ D+
Sbjct: 375 LIDDMEHAGLQTSETICRILLDA 397



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 145/319 (45%), Gaps = 7/319 (2%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G       +F  +  +G  P L TY  L+    R   FKS   L  ++   G+  + + 
Sbjct: 86  RGHREMGFALFAEMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVS 145

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I        + +A+++F+ M+  G +P+  T+N LI GYG  GK   +L     M 
Sbjct: 146 YNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQM- 204

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +   + P+  TYN L+  +C    I  A      M   G+ P  VTY  L  A+A+  E 
Sbjct: 205 KAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEM 264

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            RA  ML EM+   +  + ++ G+++   C EG M  A +    M    V PN V+++ +
Sbjct: 265 DRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMM 324

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE---IFDDMVK 303
           I G+     S    + +  M + G+ P+V ++   +    +    GKCQE   + DDM  
Sbjct: 325 IYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCNE---GKCQEAEALIDDMEH 381

Query: 304 AGIEPDIHVFSILAKGYVR 322
           AG++    +  IL     R
Sbjct: 382 AGLQTSETICRILLDAKAR 400



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 133/303 (43%), Gaps = 7/303 (2%)

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           LV   C    + EA  V   M   G+ P+ VTY  L   Y   G       +  EM+ + 
Sbjct: 44  LVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFALFAEMRRDG 103

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           V PN  T   ++  +C+ G  + A      M    V  N+V +N LI G           
Sbjct: 104 VEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAV 163

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           +    M   G++P +VTF+ ++D +  AG M      F+ M  AG+ P +  ++ L  G+
Sbjct: 164 QLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGF 223

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            R  +  +A      M++ G+ P  V +T +I+ +    +M RA  +  +M + G+  ++
Sbjct: 224 CRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDV 283

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV-------ADSWRAIGLARE 433
           ++Y  LL       +   A +L Q M+ KGV+P      ++         S++A+ L  E
Sbjct: 284 QSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIME 343

Query: 434 AKR 436
            ++
Sbjct: 344 MRK 346



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 147/301 (48%), Gaps = 7/301 (2%)

Query: 2   NILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N L+G+    G+   A  +F+ +  +G    +++Y  L+A L R  + K  + L   + +
Sbjct: 112 NCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRR 171

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
           +G++P  + FN +I+   ++G +  A+  F +MK +G  P+  TYN LI G+  V     
Sbjct: 172 EGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIAR 231

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +++    M +++ + P   TY IL+ A+  +N ++ A+ ++ +M  +G++ D  +Y  L 
Sbjct: 232 AVRAFLDM-KERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLL 290

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
            A    G+   A ++   M    V+PN     +++ GY +EG+   A+R +  M++  + 
Sbjct: 291 HALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLI 350

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           PN+  +   I+   +       +  +  ME  G++        ++DA   A L G   + 
Sbjct: 351 PNVASYCLTIRLLCNEGKCQEAEALIDDMEHAGLQTSETICRILLDA--KARLHGSTDDS 408

Query: 298 F 298
           F
Sbjct: 409 F 409



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 75/156 (48%)

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           DV   + ++     +G + + + +FD M + G+ P+   ++ L  GY   G  +   ++ 
Sbjct: 37  DVAACTALVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFALF 96

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             MR+ GV PN+  +  +I  WC   + + A  ++++M   G+  N+ +Y  L+ G    
Sbjct: 97  AEMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRH 156

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
            +   A +L + M  +G+RP   T  L+ D +   G
Sbjct: 157 SKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAG 192


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 211/440 (47%), Gaps = 5/440 (1%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  PT++T+  LV             S+ +K+ K G  P +I FN +IN    +G + E
Sbjct: 88  KGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKE 147

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+     +   G      +Y TLI G   +G+   +L++L+ + + K V  +   YNI++
Sbjct: 148 ALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKI-EGKLVNTDVVMYNIII 206

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
            + C   ++ +A+ +  +M+   I PD VT+N+L   +   G+   A  +  EM    + 
Sbjct: 207 NSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNIN 266

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+  T  I+V   CK+GN+  A   L  M +  V P++V ++SL+ G+  + + +     
Sbjct: 267 PDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHV 326

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
            + M   GV P   +++ +++      ++ +   +F +M   GI PD   ++ L  G  +
Sbjct: 327 FSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCK 386

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G    A  ++  M   G+  +++ + ++I   C    + +A+++ +K+ + GI P++ T
Sbjct: 387 LGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYT 446

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           Y  L+ G  +  +   A+++ Q +  KG      T  ++ +     GL  EA+ VL S  
Sbjct: 447 YNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAE-VLLSKM 505

Query: 443 EDRQSMPNKKDEIAVESIHR 462
           E+   +P   D +  E+I R
Sbjct: 506 ENNGIIP---DAVTYETIIR 522



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 197/404 (48%), Gaps = 1/404 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA +  + +I  G     ++Y TL+  L +    ++ L ++ K+E   +  D +++
Sbjct: 143 GKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMY 202

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +IN+  +   V +A +++ +M      P   T+N+LI G+  VG+ +E+  L   M  
Sbjct: 203 NIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVL 262

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            KN+ P+  T++ILV A C   +I  A N++  M+  G+ PD VTY++L   Y    E  
Sbjct: 263 -KNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVN 321

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A+ +   M    V P+  +  I+++G  K   +++A+     M    + P+ V +NSLI
Sbjct: 322 KAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLI 381

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G   +       + +  M   G+  D++T+++++D       + K   +   +   GI+
Sbjct: 382 DGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQ 441

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P ++ ++IL  G  + G  + A+ +   +   G   N   +  +I+G C       A  +
Sbjct: 442 PSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVL 501

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
             KM   GI P+  TYET++       +  +AE+LL+ M  +G+
Sbjct: 502 LSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGL 545



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 110/428 (25%), Positives = 195/428 (45%), Gaps = 11/428 (2%)

Query: 1   MNILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
            NILV      G+   A  IF  +++ G+ PT IT+ TL+  +    + K  L     V 
Sbjct: 97  FNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVI 156

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
             G   D + +  +IN   + G    A+++ +K++          YN +I          
Sbjct: 157 ALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVS 216

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           ++ +L   M   K + P+  T+N L+  +C    ++EA+ + ++MV   I PD  T++ L
Sbjct: 217 DAYQLYSEMIT-KRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSIL 275

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
             A  + G   RA+ ML  M    V P+  T   ++ GYC    +  A      M  L V
Sbjct: 276 VDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGV 335

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGK 293
            P+   +N +I G   IK    VD+AL+L +E    G+ PD VT+++++D     G +  
Sbjct: 336 APHAHSYNIMINGLGKIK---MVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISY 392

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
             ++ D+M   GI  DI  ++ L     +     KA +++  ++  G+ P++  +  +I 
Sbjct: 393 AWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILID 452

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G C   +++ A  +++ +   G + N  TY  ++ G  +      AE LL  ME  G+ P
Sbjct: 453 GLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIP 512

Query: 414 KKSTIQLV 421
              T + +
Sbjct: 513 DAVTYETI 520



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 143/318 (44%), Gaps = 35/318 (11%)

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           + N    A ++ +++   GI P  VT+N L   Y   GE   A  +  ++      P   
Sbjct: 71  NNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTI 130

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV------- 259
           T   +++G C  G +++A+ F   +  L  H + V + +LI G   I ++          
Sbjct: 131 TFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKI 190

Query: 260 ---------------------DKALT----LMEEFGVK---PDVVTFSTIMDAWSSAGLM 291
                                DKA++    L  E   K   PDVVTF++++  +   G +
Sbjct: 191 EGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQL 250

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            +   +F +MV   I PD++ FSIL     + G   +A+++L  M K GV P+VV ++++
Sbjct: 251 KEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSL 310

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           + G+C   ++ +A  ++  M  +G+ P+  +Y  ++ G G+ K    A  L + M  KG+
Sbjct: 311 MDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGI 370

Query: 412 RPKKSTIQLVADSWRAIG 429
            P   T   + D    +G
Sbjct: 371 APDTVTYNSLIDGLCKLG 388



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 125/260 (48%), Gaps = 1/260 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G    A  +   ++++G  P ++TY++L+              + S + + G+ P 
Sbjct: 279 LCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPH 338

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +  +N MIN   +   VDEA+ +F++M   G  P T TYN+LI G   +G+   + +L+ 
Sbjct: 339 AHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVD 398

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  +  +  +  TYN L+   C  + I++A  +V K+   GIQP   TYN L     + 
Sbjct: 399 EM-HNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKG 457

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A+ +  ++       N  T  I+++G CKEG   +A   L +M+   + P+ V +
Sbjct: 458 GRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTY 517

Query: 244 NSLIKGFLDIKDSDGVDKAL 263
            ++I+      +++  +K L
Sbjct: 518 ETIIRALFRKDENEKAEKLL 537


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 201/420 (47%), Gaps = 1/420 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++ +G  P++ T +  +             S++  V K G +P++I    ++     +G 
Sbjct: 110 MVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGE 169

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V +AM     +   G       Y TLI G   +G+  ++ +LLQ M + + VKPN   YN
Sbjct: 170 VQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEM-EGQVVKPNIVIYN 228

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           +++ ++C      +A ++  K+V  GI PD +TY +L R + + G+    +Q++ EM N 
Sbjct: 229 MIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNK 288

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            + PN  T  +++  +C++G M +A      M +    P++V FN+LI G     +    
Sbjct: 289 NINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEA 348

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            K    + E G+ PDV +++ ++  +     + +   +F++M    +  DI ++S L  G
Sbjct: 349 RKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDG 408

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             ++G    A  + +++   G  PNV+ +  +I  +C    +   + +++ MC  G+ P 
Sbjct: 409 LCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPT 468

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + TY  L+ GY ++K+   A  LL VM+ K + P   T   + D     G   +A  + K
Sbjct: 469 VLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFK 528



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 188/366 (51%), Gaps = 1/366 (0%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           + Y TL+  L +  R      L+ ++E   +KP+ +++N +I++  +     +A  ++ K
Sbjct: 190 VCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLK 249

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           + D G  P   TY +LI+G+   G+  E  +L+  M  +KN+ PN  T+N+L+ A+C K 
Sbjct: 250 IVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMV-NKNINPNVYTFNVLIDAFCRKG 308

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            + EA  +   MV  G QPD VT+NTL   +  +G    A ++   +    + P+  +  
Sbjct: 309 KMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYT 368

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
           I++ GYCK   +++A+     M+   +  ++V+++SLI G           +  + +   
Sbjct: 369 ILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINND 428

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G  P+V+T++ ++DA+     +    E+F  M   G+ P +  ++IL  GY ++   ++A
Sbjct: 429 GPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREA 488

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
            ++L+ M+   + P+ + + ++  G C + ++  A  +++ M   G   ++ TY  LL  
Sbjct: 489 MNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDA 548

Query: 390 YGEAKQ 395
           + +A+ 
Sbjct: 549 FCKAQD 554



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/430 (23%), Positives = 199/430 (46%), Gaps = 11/430 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N     G+   A  +   +++ G++P  IT TT++  L      +  +     V   GM
Sbjct: 126 INCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGM 185

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D + +  +IN   + G   +A ++ Q+M+    KP    YN +I  +    K E + K
Sbjct: 186 LLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFC---KDELTCK 242

Query: 121 L--LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
              L L   D  + P+  TY  L+R +C      E   ++ +MV   I P+  T+N L  
Sbjct: 243 ARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLID 302

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           A+ + G+   A+ M   M     +P+  T   ++SG+C  GN+ +A +    + E  + P
Sbjct: 303 AFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILP 362

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP---DVVTFSTIMDAWSSAGLMGKCQ 295
           ++  +  LI G+   K    +D+A++L  E   K    D+V +S+++D    +G +    
Sbjct: 363 DVWSYTILIIGYCKCKR---IDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAW 419

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           E+F  +   G  P++  ++IL   + +  +      +   M   G+ P V+ +  +I+G+
Sbjct: 420 ELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGY 479

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C + +++ AM++   M    + P+  TY +L  G  ++ +   A EL +VM   G     
Sbjct: 480 CKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDV 539

Query: 416 STIQLVADSW 425
           +T  ++ D++
Sbjct: 540 ATYNVLLDAF 549



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/439 (21%), Positives = 208/439 (47%), Gaps = 2/439 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +FN LI     P++I + T++ ++ + K     +SL+ ++   G+ P     +  I
Sbjct: 67  DAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWI 126

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N     G +  A  +   +   G +P   T  T++KG    G+ ++++     ++  + +
Sbjct: 127 NCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAA-QGM 185

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
             ++  Y  L+   C      +A+ ++ +M    ++P+ V YN +  ++ +   T +A  
Sbjct: 186 LLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARD 245

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  ++ +  + P+  T   ++ G+C+ G   +  + +  M    ++PN+  FN LI  F 
Sbjct: 246 LYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFC 305

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                        LM + G +PD+VTF+T++      G + + +++FD + + GI PD+ 
Sbjct: 306 RKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVW 365

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++IL  GY +     +A S+   MR   +  ++V+++++I G C + ++  A  ++  +
Sbjct: 366 SYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTI 425

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
              G  PN+ TY  L+  + + +      EL ++M  KG+ P   T  ++ + +      
Sbjct: 426 NNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRI 485

Query: 432 REAKRVLKSAEEDRQSMPN 450
           REA  +L S  + +   P+
Sbjct: 486 REAMNLL-SVMQSKNLAPD 503



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 180/363 (49%), Gaps = 10/363 (2%)

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ--DKNVK 132
           S    +D+A+ +F  + +    P+   +NT+I   G+V K +     + L+ Q   K V 
Sbjct: 60  SSFNGIDDAVTLFNHLINMQPLPSVIQFNTII---GSVVKMKHCPVAISLLKQMVFKGVT 116

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+  T +I +  +C    +  A++V+  ++  G QP+ +T  T+ +     GE  +A   
Sbjct: 117 PSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDF 176

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
              +    +  +E   G +++G CK G   DA + L  M+   V PN+V++N +I  F  
Sbjct: 177 HDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCK 236

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
            + +         + + G+ PD++T+++++  +   G  G+ +++  +MV   I P+++ 
Sbjct: 237 DELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYT 296

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           F++L   + R G+  +A+ +   M K G  P++V F T+ISG C    +  A  +++ + 
Sbjct: 297 FNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVF 356

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
           E GI P++ +Y  L+ GY + K   R +E + +  E  +R K   + +V  S    GL +
Sbjct: 357 ERGILPDVWSYTILIIGYCKCK---RIDEAVSLFNE--MRCKNMVLDIVLYSSLIDGLCK 411

Query: 433 EAK 435
             +
Sbjct: 412 SGR 414



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 147/306 (48%), Gaps = 1/306 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G  P ++TYT+L+    R  ++  +  L+ ++    + P+   FN +I+A    G 
Sbjct: 250 IVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGK 309

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           + EA  +F  M   G +P   T+NTLI G+   G   E+ KL   + + + + P+  +Y 
Sbjct: 310 MIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFE-RGILPDVWSYT 368

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           IL+  +C    I+EA ++  +M    +  D V Y++L     + G    A ++   + N+
Sbjct: 369 ILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINND 428

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              PN  T  I++  +CK  +++  +     M    + P ++ +N LI G+   K     
Sbjct: 429 GPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREA 488

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
              L++M+   + PD +T++++ D    +G +    E+F  M   G   D+  +++L   
Sbjct: 489 MNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDA 548

Query: 320 YVRAGE 325
           + +A +
Sbjct: 549 FCKAQD 554



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 3/250 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KGK  EA  +FN +++ G +P ++T+ TL++             L   V + G+ PD   
Sbjct: 307 KGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWS 366

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +  +I    +   +DEA+ +F +M+          Y++LI G    G+   + +L   ++
Sbjct: 367 YTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTIN 426

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            D    PN  TYNIL+ A+C    I+    +   M   G+ P  +TYN L   Y +    
Sbjct: 427 ND-GPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRI 485

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP-NLVVFNS 245
             A  +L  MQ+  + P+  T   +  G CK G + DA   L+++  +   P ++  +N 
Sbjct: 486 REAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWE-LFKVMHVGGPPVDVATYNV 544

Query: 246 LIKGFLDIKD 255
           L+  F   +D
Sbjct: 545 LLDAFCKAQD 554



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/307 (19%), Positives = 134/307 (43%), Gaps = 7/307 (2%)

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           S N I++A  +   ++     P  + +NT+  +  +      A  +L +M    V P+  
Sbjct: 61  SFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIF 120

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T  I ++ YC  G M  A   L  + +    PN +   +++KG      +  V KA+   
Sbjct: 121 TLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCI---NGEVQKAMDFH 177

Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           +     G+  D V + T+++     G      ++  +M    ++P+I +++++   + + 
Sbjct: 178 DNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKD 237

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
               KA  +   +   G+ P+++ +T++I G+C   +      +  +M    INPN+ T+
Sbjct: 238 ELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTF 297

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             L+  +    +   A+ +  +M ++G +P   T   +       G   EA+++  +  E
Sbjct: 298 NVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFE 357

Query: 444 DRQSMPN 450
            R  +P+
Sbjct: 358 -RGILPD 363



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 3/149 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+   A  +F+ +  +G  P +ITY  L+ A  + +     + L   +   G+ P 
Sbjct: 409 LCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPT 468

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +IN   +S  + EAM +   M+     P + TYN+L  G    G+  ++ +L +
Sbjct: 469 VLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFK 528

Query: 124 LMSQDKNVKPND-RTYNILVRAWCSKNSI 151
           +M       P D  TYN+L+ A+C    +
Sbjct: 529 VMHVGG--PPVDVATYNVLLDAFCKAQDV 555


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/443 (24%), Positives = 206/443 (46%), Gaps = 2/443 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP- 62
           L+  G+  +    F  L   G RP    +   V A          + ++ ++ +DG  P 
Sbjct: 2   LLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPP 61

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           ++  +N +I     +G   +A+++F +M +    P   TYNT+I G+   G  E   +L 
Sbjct: 62  NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 121

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             M     +KPN  TYN+L+   C    + E   ++ +M +  + PD  TY+ L    ++
Sbjct: 122 DQMVC-HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 180

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G++     +  +   N V   + TC I+++G CK+G +  A   L  +    + P  V+
Sbjct: 181 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 240

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +N+LI G+    + +G       M+   +KPD +T++ +++    A  +   Q++  +M 
Sbjct: 241 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 300

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G+ P +  F+ L   Y R G+ +K   +L+ M++ G+ PNVV + ++++ +C   K+ 
Sbjct: 301 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 360

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A++I + M    + PN + Y  ++  Y E     +A  L++ M+  G+ P   T  L+ 
Sbjct: 361 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 420

Query: 423 DSWRAIGLAREAKRVLKSAEEDR 445
                     EA+ ++ S    R
Sbjct: 421 KGLCNQSQISEAEEIINSLSNHR 443



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 198/402 (49%), Gaps = 1/402 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  E   + + +  +   P   TY+ L   L+R    K++LSL  K  K+G+       
Sbjct: 147 GRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTC 206

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + ++N   + G V  A ++ Q + ++G  PT   YNTLI GY   G+ E +      M +
Sbjct: 207 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM-K 265

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            +++KP+  TYN L+   C    I  A +++ +M  +G+ P   T+NTL  AY + G+  
Sbjct: 266 SRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLE 325

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +   +L EMQ N ++PN  + G IV+ +CK G + +A+  L  M   +V PN  V+N++I
Sbjct: 326 KCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII 385

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             +++   +D     +  M+  G+ P +VT++ ++    +   + + +EI + +    + 
Sbjct: 386 DAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLI 445

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD   ++ L       G   KA  +   M KYG+   V  +  +ISG   A ++     +
Sbjct: 446 PDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYL 505

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
           Y+KM +  + P+   +  ++  Y +     +AE+L + M +K
Sbjct: 506 YQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 547



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 215/451 (47%), Gaps = 15/451 (3%)

Query: 7   KGKPHEAHY-IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
           KG   EA + + + ++  G +P  ITY  L++ L R  R     +L+ ++    M PD  
Sbjct: 110 KGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGF 169

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            ++ + +  S +G+    + +F K   +G      T + L+ G    GK   + ++LQ +
Sbjct: 170 TYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 229

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
             +  + P    YN L+  +C    +E A++   +M +  I+PD +TYN L     +   
Sbjct: 230 V-NAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 288

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A+ +L EMQ+N V P   T   ++  Y + G +E     L  M+E  + PN+V + S
Sbjct: 289 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 348

Query: 246 LIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           ++  F     +  + +A+ ++++     V P+   ++ I+DA+   G   +   + + M 
Sbjct: 349 IVNAFCK---NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMK 405

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             GI P I  +++L KG     +  +AE I+ S+  + + P+ V + T+IS  C    + 
Sbjct: 406 SNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNID 465

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
           +A+ + ++M + GI   ++TY  L+ G G A +    E L Q M +  V P  +   ++ 
Sbjct: 466 KALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMV 525

Query: 423 DSWRAIGLAREAKRVLKSAEEDRQSMPNKKD 453
           +++   G   E K     AE+ R+ M  K++
Sbjct: 526 EAYSKYG--NEIK-----AEDLRKEMLQKRN 549



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 183/387 (47%), Gaps = 1/387 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   +Y  ++A + R  R    + +  ++ +  + P+ I +N MI+   + G+++   ++
Sbjct: 61  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M   G KP   TYN L+ G    G+  E+  LL  M+  K V P+  TY+IL     
Sbjct: 121 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMV-PDGFTYSILFDGLS 179

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                +   ++  K + +G+     T + L     + G+   AE++L  + N  + P   
Sbjct: 180 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 239

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               +++GYC+ G +E A     +MK   + P+ + +N+LI G    +        L  M
Sbjct: 240 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 299

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           ++ GV P V TF+T++DA+   G + KC  +  +M + G++P++  +  +   + + G+ 
Sbjct: 300 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 359

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +A +IL  M    V PN  ++  +I  +       +A  + EKM   GI+P++ TY  L
Sbjct: 360 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLL 419

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRP 413
           + G     Q   AEE++  +    + P
Sbjct: 420 IKGLCNQSQISEAEEIINSLSNHRLIP 446



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 168/339 (49%), Gaps = 7/339 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK   A  +   L+  G  PT + Y TL+    +    +   S   +++   +
Sbjct: 210 LNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHI 269

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD I +NA+IN   ++  +  A  +  +M+D+G  PT  T+NTLI  YG  G+ E+   
Sbjct: 270 KPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFI 329

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M Q+  +KPN  +Y  +V A+C    I EA  ++  M    + P+A  YN +  AY
Sbjct: 330 VLSEM-QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 388

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            ++G   +A  ++ +M++N + P+  T  +++ G C +  + +A   +  +    + P+ 
Sbjct: 389 VEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDA 448

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +N+LI           +DKAL L   M ++G+K  V T+  ++     AG + + + +
Sbjct: 449 VSYNTLISACC---YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYL 505

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           +  M++  + P   + +I+ + Y + G   KAE +   M
Sbjct: 506 YQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 544


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 218/444 (49%), Gaps = 3/444 (0%)

Query: 9   KPHEAHYIFNCLIEEGH-RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           K ++A  +F C + E H  P+++ ++ L+ A+ +  ++++++SL   +E  G+  D   F
Sbjct: 59  KFNDALTLF-CDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSF 117

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+       +  A+    KM   G +P+  T+ +L+ G+ +V +  E++ L+  +  
Sbjct: 118 TTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV- 176

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
               +PN   YN ++ + C K  +  A +V+  M   GI+PD VTYN+L       G   
Sbjct: 177 GLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWG 236

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            + ++L +M    + P+  T   ++  Y KEG + +A +    M +  V+PN+V +NSLI
Sbjct: 237 VSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLI 296

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G       D   K L ++   G  P+ VT++T+++ +  A  +    +I   M + G++
Sbjct: 297 NGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVD 356

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
            D   ++ L +GY +AG+   AE +L  M   GVHP++  F  ++ G C+  K+ +A+  
Sbjct: 357 GDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVR 416

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
            E + +      + TY  ++ G  +A +   A  L   +  KGV P   T   +    R 
Sbjct: 417 LEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRR 476

Query: 428 IGLAREAKRVLKSAEEDRQSMPNK 451
             L REA  + +  +++   MP K
Sbjct: 477 KRLWREAHELYRKMQKEDGLMPIK 500



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 152/309 (49%), Gaps = 8/309 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  KG+ + A  +   + + G RP ++TY +L+  L     +     ++S + + G+ PD
Sbjct: 194 LCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPD 253

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I F+A+I+   + G + EA K + +M      P   TYN+LI G    G  +E+ K+L 
Sbjct: 254 VITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLN 313

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           ++   K   PN  TYN L+  +C    +++   ++  M   G+  D  TYNTL + Y Q 
Sbjct: 314 VLVS-KGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQA 372

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   AE++L  M +  V P+  T  I++ G C  G +  A+  L  +++ +    ++ +
Sbjct: 373 GKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITY 432

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N +IKG      +D V+ A  L       GV PDV+T+ T+M       L  +  E++  
Sbjct: 433 NIIIKGLC---KADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRK 489

Query: 301 MVKA-GIEP 308
           M K  G+ P
Sbjct: 490 MQKEDGLMP 498



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 7/197 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G   EA  + N L+ +G  P  +TY TL+    + KR    + ++  + +DG+
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D+  +N +     ++G    A K+  +M   G  P   T+N L+ G  + GK  ++L 
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALV 415

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA--- 177
            L+ + + K V     TYNI+++  C  + +E+AW +   +   G+ PD +TY T+    
Sbjct: 416 RLEDLQKSKTV-VGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGL 474

Query: 178 ---RAYAQYGETYRAEQ 191
              R + +  E YR  Q
Sbjct: 475 RRKRLWREAHELYRKMQ 491


>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 569

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 181/368 (49%), Gaps = 1/368 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           LIE    PT  TY  L+ A       +   ++ +++ K G+ P +I++NA I+   ++GN
Sbjct: 174 LIEARCIPTEDTYALLLKAYCTSGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGN 233

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
              A++IFQ+MK   C+P+T TY  LI  +G   +   +LKL   M   K  KPN  TY 
Sbjct: 234 PQRAVEIFQRMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQK-CKPNICTYT 292

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            LV A+  +   E+A  +  ++   G +PD   YN L  AY++ G  Y A ++   MQ+ 
Sbjct: 293 ALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM 352

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+  +  I+V  Y + G  EDA      MK L + P +     L+  +    D    
Sbjct: 353 GCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKC 412

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
           +  +  + E G++PD    +++++ +   G  GK +E+   M       DI  ++IL   
Sbjct: 413 EDIVNELHESGLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINI 472

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y RAG  +K E +  S+    + P+VV +T+ +  +       + + I+E+M + G +P+
Sbjct: 473 YGRAGFFEKMEGLFQSLAAKNLKPDVVTWTSRLGAYSRKKLYTKCLEIFEEMIDAGCHPD 532

Query: 380 LKTYETLL 387
            +T + LL
Sbjct: 533 GRTAKVLL 540



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 165/340 (48%), Gaps = 11/340 (3%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+  G P  A  IF  +  +  +P+  TYT L+    +  +    L L +++     KP+
Sbjct: 228 LMKAGNPQRAVEIFQRMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKPN 287

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              + A++NA +  G  ++A +IF+++++ G +P    YN L++ Y   G P  + ++  
Sbjct: 288 ICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFS 347

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           LM Q    +P+  +YNI+V A+      E+A  V  +M   GI P   ++  L  AY++ 
Sbjct: 348 LM-QHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKA 406

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+  + E ++ E+  + + P+      +++ Y + G        L  M+      ++  +
Sbjct: 407 GDVAKCEDIVNELHESGLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTY 466

Query: 244 NSLIK-----GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           N LI      GF +    +G+ ++L       +KPDVVT+++ + A+S   L  KC EIF
Sbjct: 467 NILINIYGRAGFFE--KMEGLFQSLAAK---NLKPDVVTWTSRLGAYSRKKLYTKCLEIF 521

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           ++M+ AG  PD     +L        + ++  +++ +M K
Sbjct: 522 EEMIDAGCHPDGRTAKVLLSSCSSEDQIEQVTTVIRTMHK 561



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 147/308 (47%)

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P + TY +L++A+C+   +E+A  +  +M   G+ P A+ YN       + G   RA ++
Sbjct: 181 PTEDTYALLLKAYCTSGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEI 240

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
              M+ +  +P+  T  ++++ + K      A++    M+  +  PN+  + +L+  F  
Sbjct: 241 FQRMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAR 300

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
               +  ++    ++E G +PDV  ++ +M+A+S AG      EIF  M   G EPD   
Sbjct: 301 EGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRAS 360

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++I+   Y R G  + A+++   M++ G+ P +     ++S +  A  + +   I  ++ 
Sbjct: 361 YNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELH 420

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
           E G+ P+     ++L  YG   Q  + EE+L  ME        ST  ++ + +   G   
Sbjct: 421 ESGLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAGFFE 480

Query: 433 EAKRVLKS 440
           + + + +S
Sbjct: 481 KMEGLFQS 488



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 146/305 (47%)

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           +N+++ A+  K+  + A    ++++ +   P   TY  L +AY   G   +AE +  EM+
Sbjct: 151 FNLVIDAYGRKSLYKMAETTYFELIEARCIPTEDTYALLLKAYCTSGLLEKAEAIFAEMR 210

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
              + P+       + G  K GN + A+    RMK     P+   +  LI        S 
Sbjct: 211 KYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMKRDCCQPSTETYTLLINLHGKASQSY 270

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
              K    M     KP++ T++ +++A++  GL  K +EIF+ + + G EPD++ ++ L 
Sbjct: 271 MALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALM 330

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
           + Y RAG P  A  I + M+  G  P+   +  ++  +      + A +++E+M  +GI 
Sbjct: 331 EAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGIT 390

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           P +K++  LL  Y +A    + E+++  + E G+ P    +  + + +  +G   + + V
Sbjct: 391 PTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDTFVLNSMLNLYGRLGQFGKMEEV 450

Query: 438 LKSAE 442
           L + E
Sbjct: 451 LTAME 455



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 92/173 (53%)

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           + DV+ F+ ++DA+    L    +  + ++++A   P    +++L K Y  +G  +KAE+
Sbjct: 145 QSDVMIFNLVIDAYGRKSLYKMAETTYFELIEARCIPTEDTYALLLKAYCTSGLLEKAEA 204

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           I   MRKYG+ P+ +++   I G   A   QRA+ I+++M      P+ +TY  L+  +G
Sbjct: 205 IFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMKRDCCQPSTETYTLLINLHG 264

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           +A Q + A +L   M  +  +P   T   + +++   GL  +A+ + +  +ED
Sbjct: 265 KASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 317


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 215/467 (46%), Gaps = 37/467 (7%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV   +  +++++F  +  +G  P +  ++T + A  +  + +  + L   +EK G+ P+
Sbjct: 289 LVKANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPN 347

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +I+   + GN+DEA +  +KM   G   T  TY+ LI G   + K  E+  +L+
Sbjct: 348 VVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLK 407

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
             + +K   PN+  YN L+  +C   ++ +A  +   MV+ GI P++VT N++ + + + 
Sbjct: 408 -ETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKI 466

Query: 184 GETYRAEQMLFEMQNN-----------------------------------QVRPNERTC 208
           G+  +AE +L EM +                                     +RPN+   
Sbjct: 467 GQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLL 526

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             +V G CKEG   DA+   +R+ E     NLV  N+LI G     +     + L  M E
Sbjct: 527 TTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLE 586

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G   D +T++T++      G + +  ++  +MVK GIEPD   +++L  G  R G+  +
Sbjct: 587 RGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDE 646

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A ++    +   + PNV  +  +I G+C A K++    ++ ++    +  N   Y TL+ 
Sbjct: 647 AVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIR 706

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
            Y        A +L   M  KG+ P  +T   +      IG   +AK
Sbjct: 707 AYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAK 753



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/502 (23%), Positives = 222/502 (44%), Gaps = 71/502 (14%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA      ++++G   TLITY+ L+  L + ++F    S++ +  + G  P+
Sbjct: 358 LCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPN 417

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVG---------- 113
            +++N +I+   + GN+ +A++I   M   G  P + T N++I+G+  +G          
Sbjct: 418 EVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILE 477

Query: 114 -------------------------KPEESLKLLQLMSQDKNVKPNDR------------ 136
                                    + E +L+ L+ M   +N++PND             
Sbjct: 478 EMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLL-RNMRPNDGLLTTLVGGLCKE 536

Query: 137 -----------------------TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY 173
                                  T N L+   C   +++EA  ++ KM+  G   D +TY
Sbjct: 537 GKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITY 596

Query: 174 NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
           NTL     + G+     ++  EM    + P+  T  +++ G C+ G +++A+      K 
Sbjct: 597 NTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKS 656

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
            ++ PN+  +  +I G+      +  +K  T +    ++ + V ++T++ A+   G   +
Sbjct: 657 RDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVE 716

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
             ++ DDM   GI P    +S L  G    G  + A+ ++  MRK G+ PNVV +T +I 
Sbjct: 717 AFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIG 776

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G+C   +M + +++ ++M    I+PN  TY  ++ GY ++     A +LL  M  KG+ P
Sbjct: 777 GYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVP 836

Query: 414 KKSTIQLVADSWRAIGLAREAK 435
              T  ++ + +   G   E K
Sbjct: 837 DTVTYNVLTNGFCKEGKIEEGK 858



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 170/355 (47%), Gaps = 3/355 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           RP     TTLV  L ++ +    + L  ++ + G   + +  NA+I+   ++GN+ EA++
Sbjct: 520 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVR 579

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           + +KM + G      TYNTLI G    GK EE  KL   M + + ++P+  TYN+L+   
Sbjct: 580 LLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK-QGIEPDTFTYNLLIHGM 638

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C    ++EA N+  +  +  + P+  TY  +   Y +  +    E++  E+    +  N 
Sbjct: 639 CRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNS 698

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
                ++  YC+ GN  +A +    M+   + P    ++SLI G  +I   +     +  
Sbjct: 699 VVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDE 758

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M + G+ P+VV ++ ++  +   G M K   +  +M    I P+   ++++  GY ++G+
Sbjct: 759 MRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGD 818

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            + A  +L  M   G+ P+ V +  + +G+C   K++    + E    +G N  L
Sbjct: 819 MKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAED--GVGFNSPL 871



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 152/316 (48%), Gaps = 1/316 (0%)

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +K V P  +T   L+ +    N +E+++  V++ +  G+ PD   ++T   A+ + G+  
Sbjct: 272 NKGVFPTVKTCTFLLSSLVKANELEKSY-WVFETMRQGVSPDVYLFSTAINAFCKGGKVE 330

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A Q+ F+M+   V PN  T   ++ G CK GN+++A RF  +M +  V+  L+ ++ LI
Sbjct: 331 DAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLI 390

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G + ++  +  +  L    E G  P+ V ++T++D +   G +G    I  DMV  GI 
Sbjct: 391 NGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGIN 450

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P+    + + +G+ + G+ ++AE IL  M   G   N   FTT+I   C   + + A+  
Sbjct: 451 PNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRF 510

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
             +M    + PN     TL+ G  +  +   A EL   + EKG      T   +      
Sbjct: 511 LREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCK 570

Query: 428 IGLAREAKRVLKSAEE 443
            G  +EA R+LK   E
Sbjct: 571 TGNMQEAVRLLKKMLE 586


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 203/419 (48%), Gaps = 18/419 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L  +G+  +A  + + ++  G  P ++TY  L+ A  + + ++  + LI  +  +G 
Sbjct: 159 MHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGC 218

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P ++ +N +++     G+VD A ++   +   GC P T  YNT++KG    G+ E+  +
Sbjct: 219 TPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEE 278

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L+  M  + N  P++ T ++++ + C +   + A  ++ KM       + VTYN +    
Sbjct: 279 LIAEMFSE-NCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGL 337

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A  +L  MQ +  +PN  T  I+V G C     EDA   + +M + +  P++
Sbjct: 338 CEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDI 397

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL--------MEEFGVKPDVVTFSTIMDAWSSAGLMG 292
           + FN++I GFL         K LT+        M E G  P+ VT+S++++  +  G M 
Sbjct: 398 LTFNTII-GFL-------CQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKME 449

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           +  E+ ++M   G  P+I+ + +LA+      +  +A  ++  ++  G+ P  V++ T++
Sbjct: 450 QSLELLNEMGSKGFNPEIN-YHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTIL 508

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
            G C   K  +A+ I   M   G  P+  TY  L+ G         A ELL  +  + V
Sbjct: 509 LGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDV 567



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/434 (23%), Positives = 202/434 (46%), Gaps = 17/434 (3%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK-- 61
           L  +G+P +A  +       G   T +TY+ L     R  R      ++     DGM   
Sbjct: 98  LCRRGRPADAARVVEAC---GSAATAVTYSALADGYCRVGRLDEARRVV-----DGMPVL 149

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P +  +N +++A    G V +A+ +   M   GC P   TYN L++         ++++L
Sbjct: 150 PSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMEL 209

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           + LM + +   P + TYN+++   C +  ++ A  ++  + + G  P+ V YNT+ +   
Sbjct: 210 IDLM-RVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLR 268

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
             G     E+++ EM +    P+E T  +++S  C+EG  + A+R L +M + +   N+V
Sbjct: 269 TAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIV 328

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            +N+++ G  +    DG    L+ M+  G KP++ T++ ++    +A      +++   M
Sbjct: 329 TYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKM 388

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
            +    PDI  F+ +     + G   +A  +   M + G  PN V +++VI G     KM
Sbjct: 389 SQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKM 448

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           ++++ +  +M   G NP +  Y  L     E  +   A +++  +++ G+ P     Q V
Sbjct: 449 EQSLELLNEMGSKGFNPEIN-YHLLAECLNEEDKLVEAIQMVHKLQDTGISP-----QAV 502

Query: 422 ADSWRAIGLAREAK 435
             +   +GL R  K
Sbjct: 503 LYNTILLGLCRNGK 516



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 172/382 (45%), Gaps = 14/382 (3%)

Query: 55  VEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK 114
           VE     PD  L N ++      G   +A ++ +     G   T  TY+ L  GY  VG+
Sbjct: 79  VESSLCPPDVALANRLVRDLCRRGRPADAARVVEA---CGSAATAVTYSALADGYCRVGR 135

Query: 115 PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYN 174
            +E+ +++  M     V P+   YN L+ A C +  + +A  ++  M+  G  PD VTYN
Sbjct: 136 LDEARRVVDGMP----VLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYN 191

Query: 175 TLARAYAQYGETYR-AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
            L  A A  G  YR A +++  M+     P   T  +I+ G C+EG+++ A   L  +  
Sbjct: 192 ILLEA-ACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPS 250

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
               PN V +N+++KG       + V++ +  M      P   T S ++ +    GL  +
Sbjct: 251 YGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQR 310

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
              + + M K     +I  ++ +  G    G    A  +L++M+  G  PN+  +  ++ 
Sbjct: 311 AIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVK 370

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G CNA + + A  +  KM +    P++ T+ T++    +     +A E+ + M EKG  P
Sbjct: 371 GLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCP 430

Query: 414 KKSTIQLVADSWRAIGLAREAK 435
              T   V +     GLA+  K
Sbjct: 431 NSVTYSSVIE-----GLAKTGK 447



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/373 (24%), Positives = 154/373 (41%), Gaps = 11/373 (2%)

Query: 78  GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT 137
           G +D A+++ +    S C P  +  N L++     G+P ++ ++++             T
Sbjct: 70  GELDAALRVVES---SLCPPDVALANRLVRDLCRRGRPADAARVVEACGSAATAV----T 122

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           Y+ L   +C    ++EA  VV  M    + P A  YN L  A    G+   A  +L  M 
Sbjct: 123 YSALADGYCRVGRLDEARRVVDGM---PVLPSAYAYNPLMHALCVRGQVRDALVLLDNML 179

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
                P+  T  I++   CK      AM  +  M+     P  V +N ++ G     D D
Sbjct: 180 YRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVD 239

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
              + L  +  +G  P+ V ++T++    +AG     +E+  +M      P     S++ 
Sbjct: 240 YARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVI 299

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
               + G  Q+A  +L  M K+    N+V +  V+SG C    +  A+ +   M   G  
Sbjct: 300 SSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCK 359

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           PN+ TY  L+ G   A++   AE+L+  M +    P   T   +       GL  +A  V
Sbjct: 360 PNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEV 419

Query: 438 LKSAEEDRQSMPN 450
            K   E +   PN
Sbjct: 420 FKQMPE-KGCCPN 431



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 91/174 (52%), Gaps = 2/174 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +  L  KG   +A  +F  + E+G  P  +TY++++  L +  + +  L L++++   G 
Sbjct: 404 IGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGF 463

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I ++ +    +E   + EA+++  K++D+G  P    YNT++ G    GK ++++ 
Sbjct: 464 NPE-INYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAID 522

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYN 174
           +L  M  D    P++ TY+IL++    +  ++EA  ++  + +  +  D +  N
Sbjct: 523 ILSNMVSD-GCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDVIVDNLIKN 575


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 212/407 (52%), Gaps = 7/407 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK +EA    + ++  G     +TY  L+  L +  + ++ L ++ ++E   +  + +++
Sbjct: 137 GKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMY 196

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +I+   +   V +A  ++ +M      PT  T+++LI G+  VGK +++ +L   M  
Sbjct: 197 STIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVM 256

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            KN+ P+  T+NILV A C +  I+EA NV+  M+  G++P  VTYNTL   Y    E  
Sbjct: 257 -KNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVG 315

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A+ +L  +   +V PN R+  I+++G+CK   +++A+   + M    + P+ V +NSLI
Sbjct: 316 KAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLI 375

Query: 248 KGFLDIKDSDGVDKALTLMEEFG---VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            G      +  +  A  L++E     +  D+VT+++++D +     + K   +   + + 
Sbjct: 376 DGLCK---AGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEH 432

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           GI+P++  ++IL  G  + G+ + A+ +   +   G + N   +  +I+G C       A
Sbjct: 433 GIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEA 492

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
             +  KM + GI P+  TYET++       +  +A++LL+ M  KGV
Sbjct: 493 EVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGV 539



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 110/479 (22%), Positives = 221/479 (46%), Gaps = 32/479 (6%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQK-RFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           FN + +    P+++ +  ++  L + K  + ++LSL +++E  G+KPD    + +IN   
Sbjct: 54  FNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYC 113

Query: 76  ESGNVDEAMKIFQKMKDSGC---------------------KPTTSTYNTLIKGYGNVGK 114
             G +  A  +F K+   G                           TY  LI G   +G+
Sbjct: 114 HLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQ 173

Query: 115 PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYN 174
              +L++L+ + + K V  N   Y+ ++   C    + +A+ +  +M+   I P  VT++
Sbjct: 174 TRAALQVLRQI-EGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFS 232

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           +L   +   G+   A ++  EM    + P+  T  I+V   CKEG +++A   +  M + 
Sbjct: 233 SLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKE 292

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            V P +V +N+L+ G+  + +       L+++    V P+  +++ +++ +    ++ + 
Sbjct: 293 GVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEA 352

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
             +F +M   GI P    ++ L  G  +AG    A  ++  M    +  ++V + ++I  
Sbjct: 353 LCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDV 412

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
           +C    + +A+++ +K+ E GI PN+ TY  L+ G  +  Q   A+++ Q +  KG    
Sbjct: 413 FCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVN 472

Query: 415 KSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESI-----HRKQNLSA 468
             T  ++ +     GL  EA+ VL S  ED   +P   D +  E+I     H+ +N  A
Sbjct: 473 AWTYNIMINGLCKEGLFDEAE-VLLSKMEDNGIIP---DAVTYETIIQALFHKDENEKA 527



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 146/284 (51%), Gaps = 16/284 (5%)

Query: 1   MNILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLV---AALTRQKRFKSILSLIS 53
            NILV     +GK  EA  +   +++EG  PT++TY TL+     +    + K +LS+IS
Sbjct: 266 FNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIIS 325

Query: 54  KVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVG 113
           ++    + P+S  +N MIN   +   VDEA+ +F +M   G  P   TYN+LI G    G
Sbjct: 326 RMR---VAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAG 382

Query: 114 KPEESLKLLQLMSQDKNVKPND-RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT 172
           +   + +L+  M    N  P D  TYN L+  +C    +++A  +V K+   GIQP+  T
Sbjct: 383 RIPYAWELVDEMHN--NCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCT 440

Query: 173 YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMK 232
           YN L     + G+   A+ +  ++       N  T  I+++G CKEG  ++A   L +M+
Sbjct: 441 YNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKME 500

Query: 233 ELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           +  + P+ V + ++I+     KD +  +KA  L+ E  +K  VV
Sbjct: 501 DNGIIPDAVTYETIIQALFH-KDEN--EKAQKLLREMVIKGVVV 541



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 114/243 (46%), Gaps = 28/243 (11%)

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL-TLMEEFGVKPDVVTFS 279
           +++A+    RM+++   P++V FN ++   +  K+      +L T ME  GVKPD+ T S
Sbjct: 47  VDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLS 106

Query: 280 TIMDAWSSAGLM------------------GKCQE--IFDDMVKA-GIEPDIHVFSILAK 318
            +++ +   G M                  GK  E  +F D V A G   +   + IL  
Sbjct: 107 ILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILIN 166

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           G  + G+ + A  +L  +    V+ NVVM++T+I G C    +  A  +Y +M    I P
Sbjct: 167 GLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPP 226

Query: 379 NLKTYETLLWGY---GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
            + T+ +L++G+   G+ K  +R   L   M  K + P   T  ++ D+    G  +EAK
Sbjct: 227 TVVTFSSLIYGFCIVGKFKDAFR---LFNEMVMKNINPDAYTFNILVDALCKEGKIKEAK 283

Query: 436 RVL 438
            V+
Sbjct: 284 NVI 286


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 212/427 (49%), Gaps = 15/427 (3%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDG--MKPDSILFNAMINACSESGNVDEAM 84
           P   TY  +V  L +  R  S    + K  +DG  + PD + ++ +IN   + G +D A 
Sbjct: 7   PNERTYNVVVNGLCKA-RLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRAC 65

Query: 85  KIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +I ++M    G  P   TY +++ G    GK + + ++++ M   K V+P+  T++ L+ 
Sbjct: 66  EILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKL-KGVEPDKFTFSALIT 124

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ---YGETYRAEQMLFEMQNNQ 200
            WC+   ++EA  +  +++ S  + DAV+ + L     +    GE Y   Q +   ++  
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGA 184

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
            +P+  T   ++ G+CK GN+E AM+ L  M+  +  PN+V ++SL+ G     D   +D
Sbjct: 185 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGD---LD 241

Query: 261 KALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
           +AL L   M   G  P+VVT++T++    +A  +   + + D+M       D   ++ L 
Sbjct: 242 QALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALL 301

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM-CEIGI 376
            GY R G  ++A+ +   M      P+ + +T ++ G+CNA +++ A  + E M    GI
Sbjct: 302 DGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGI 361

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
           +P++ TY  ++ GY  AK+   A E +Q M  + V P   T   + D     G    A  
Sbjct: 362 DPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAME 421

Query: 437 VLKSAEE 443
           VLK+ ++
Sbjct: 422 VLKNVDK 428



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/519 (24%), Positives = 225/519 (43%), Gaps = 93/519 (17%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  P ++TYT++V  L R  +      ++ +++  G++PD   F+A+I     +  VDE
Sbjct: 75  DGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDE 134

Query: 83  AMKIFQKMKDSGC--------------------------------------KPTTSTYNT 104
           A+K+++++  S C                                      KP   TY  
Sbjct: 135 ALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTA 194

Query: 105 LIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS 164
           LI G+   G  E+++K+L +M   K V PN  TY+ L+   C    +++A ++  +M + 
Sbjct: 195 LIDGFCKSGNLEKAMKMLGVMEGRKCV-PNVVTYSSLLHGLCKAGDLDQALDLFRRMTSK 253

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           G  P+ VTY TL        +   A  ++ EM       +  +   ++ GYC+ G +E+A
Sbjct: 254 GCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEA 313

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF----GVKPDVVTFST 280
            +    M      P+ + +  L++GF    ++  +++A  L+E      G+ PDVVT+S 
Sbjct: 314 KQLFKEMAAKSCLPDRITYTCLVRGFC---NASRLEEARFLLENMKTAAGIDPDVVTYSI 370

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++  +S A    +  E   +M+   + P+   +S L  G  +AG    A  +L ++ K  
Sbjct: 371 VVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK-- 428

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKM-------------------CEI------- 374
             P+VV +T VI G C   + + A+++ E+M                   C +       
Sbjct: 429 --PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAW 486

Query: 375 ---------GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
                    G+ P + TY TLL G+    +   A EL +VM  K  +   S   LV +  
Sbjct: 487 KLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKA-KKSSSAANLVPEQA 545

Query: 426 -----RAIGLAREAKRVLKSAEE--DRQSMPNKKDEIAV 457
                R +  ARE  + +   EE   R+  P ++D +A+
Sbjct: 546 FSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAI 584



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 186/364 (51%), Gaps = 21/364 (5%)

Query: 21  IEEGHR--PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESG 78
           + EG +  P ++TY++L+  L +       L L  ++   G  P+ + +  +I+    + 
Sbjct: 214 VMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAH 273

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
            VD A  +  +M  + C   T +YN L+ GY  +G+ EE+ +L + M+  K+  P+  TY
Sbjct: 274 KVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAA-KSCLPDRITY 332

Query: 139 NILVRAWCSKNSIEEAWNVVYKM-VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
             LVR +C+ + +EEA  ++  M  A+GI PD VTY+ +   Y++      A + + EM 
Sbjct: 333 TCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMI 392

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
              V PN  T   ++ G CK G +  AM  L  + +    P++V +  +I+G      +D
Sbjct: 393 ARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCG---TD 445

Query: 258 GVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
             ++ALTL+EE     V+P V TF++++ A    G M +  ++   M   G+EP +  ++
Sbjct: 446 RTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYT 505

Query: 315 ILAKGYVRAGEPQKAESILTSMR----KYGVHPNVV---MFTTVISGWCNAVKMQRAMSI 367
            L +G+ R G  + A  +   MR    K     N+V    F+ +I G C A ++ +AM++
Sbjct: 506 TLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAV 565

Query: 368 YEKM 371
            E++
Sbjct: 566 VEEL 569



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 102/428 (23%), Positives = 205/428 (47%), Gaps = 23/428 (5%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P ++TYT L+    +    +  + ++  +E     P+ + ++++++   ++G++D+A+ 
Sbjct: 186 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 245

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR-TYNILVRA 144
           +F++M   GC P   TY TLI G     K + +  L+  M+      P D  +YN L+  
Sbjct: 246 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTA--TCCPADTVSYNALLDG 303

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ---- 200
           +C    IEEA  +  +M A    PD +TY  L R +       R E+  F ++N +    
Sbjct: 304 YCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCN---ASRLEEARFLLENMKTAAG 360

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           + P+  T  I+V+GY +     +A  F+  M    V PN V ++SLI G      +  V+
Sbjct: 361 IDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLC---KAGRVN 417

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
            A+ +++    KPDVVT++ +++         +   + ++MV   +EP +  F+ +    
Sbjct: 418 HAMEVLKNVD-KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGAL 476

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM--------C 372
            R G+  +A  +L +M  +G+ P +V +TT++ G+    +M+ A  ++E M         
Sbjct: 477 CRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSS 536

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
              + P  + +  L+ G  +A++  +A  +++ +  +   P +     + D     G   
Sbjct: 537 AANLVPE-QAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTE 595

Query: 433 EAKRVLKS 440
           EA +++ S
Sbjct: 596 EAGKLINS 603



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 183/381 (48%), Gaps = 13/381 (3%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   +A  +F  +  +G  P ++TYTTL+  L    +  +   L+ ++       D
Sbjct: 234 LCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPAD 293

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ +NA+++     G ++EA ++F++M    C P   TY  L++G+ N  + EE+  LL+
Sbjct: 294 TVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLE 353

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M     + P+  TY+I+V  +       EA   + +M+A  + P+AVTY++L     + 
Sbjct: 354 NMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKA 413

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A ++L     N  +P+  T  I++ G C     E+A+  L  M    V P++  F
Sbjct: 414 GRVNHAMEVL----KNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTF 469

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           NS+I     + D D   K L  M   G++P +VT++T+++ +S  G M    E+F+ M +
Sbjct: 470 NSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRR 529

Query: 304 --------AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
                   A + P+   FS L +G  +A E  KA +++  +R     P       ++ G 
Sbjct: 530 KAKKSSSAANLVPE-QAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGL 588

Query: 356 CNAVKMQRAMSIYEKMCEIGI 376
             A + + A  +   + ++G+
Sbjct: 589 LRAGRTEEAGKLINSISKVGL 609



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 167/335 (49%), Gaps = 24/335 (7%)

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV-ASGIQPDAVTYNTLARAYAQYGETYRA 189
           V PN+RTYN++V   C      +A+ V+ +M     + PD VTY+T+   + + GE  RA
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64

Query: 190 EQMLFEM-QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
            ++L EM   + + P+  T   +V G C++G M+ A   +  MK   V P+   F++LI 
Sbjct: 65  CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL---------MGKCQEIFD 299
           G+ + +    VD+AL L +E      ++T S  +DA SS+ L         +G+  E+F 
Sbjct: 125 GWCNARK---VDEALKLYKE------ILTSSCRLDAVSSSALITGLCRERRIGEAYELFQ 175

Query: 300 DM---VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +M        +PD+  ++ L  G+ ++G  +KA  +L  M      PNVV +++++ G C
Sbjct: 176 EMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLC 235

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
            A  + +A+ ++ +M   G  PN+ TY TL+ G   A +   A  L+  M          
Sbjct: 236 KAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTV 295

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
           +   + D +  +G   EAK++ K     +  +P++
Sbjct: 296 SYNALLDGYCRLGRIEEAKQLFKEMAA-KSCLPDR 329


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/438 (24%), Positives = 211/438 (48%), Gaps = 1/438 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N LV +G   +A      + + G  P ++TY TL+    + +  ++ L +   +  +G+
Sbjct: 439 INGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGV 498

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + ++ + ++++N   ++GN++ A  +F+ M + G       Y TL+ G    G    + K
Sbjct: 499 EANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFK 558

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + Q +  +KN+ P+   YN+ +   C+     EA + + +M  +G++PD  TYNT+  A 
Sbjct: 559 VGQEL-MEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAAR 617

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+T +A ++L EM+ N ++PN  T   +V G  + G ++ A   L  M      P  
Sbjct: 618 CREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTS 677

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +    +++     +  D + +   LM   G+  D+  ++T++      G+      + D+
Sbjct: 678 LTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDE 737

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  GI PD   F+ L  G+ ++     A +I   M   G+ PN+  F T++ G  +A +
Sbjct: 738 MLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGR 797

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A ++   M ++G+ PN  TY+ L+ GY +      A  L   M  KG  PK ST   
Sbjct: 798 IGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNS 857

Query: 421 VADSWRAIGLAREAKRVL 438
           +   +   G+  +AK + 
Sbjct: 858 LMSDFAKAGMMNQAKELF 875



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 195/434 (44%), Gaps = 36/434 (8%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  P ++TYT L+    + K      SL   + + G+ PD +  +A+++     G   E
Sbjct: 251 DGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSE 310

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A  +F++M   G  P   TY TLI       +  ESL LL  M   + V  +   Y  L+
Sbjct: 311 AYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVS-RGVVMDLVMYTALM 369

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
                +  IEEA +V+    +  I P+ VTY  L  A+ + G    AEQ+L +M+   V 
Sbjct: 370 DRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVI 429

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK-------- 254
           PN  T   I++G  K G +  A  ++ +MK+  + PN+V + +LI GF   +        
Sbjct: 430 PNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDV 489

Query: 255 ----------------DS-----------DGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
                           DS           +G +     M+E G+  D V ++T+MD    
Sbjct: 490 YRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFK 549

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
            G M    ++  ++++  + PD  V+++        G+  +A+S L  MR  G+ P+   
Sbjct: 550 TGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQAT 609

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           + T+I+  C   K  +A+ + ++M    I PNL TY TL+ G  EA    +A+ LL  M 
Sbjct: 610 YNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMA 669

Query: 408 EKGVRPKKSTIQLV 421
             G  P   T Q V
Sbjct: 670 SAGFAPTSLTHQRV 683



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 206/463 (44%), Gaps = 42/463 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L  +GK  EA  +      +   P  +TYT LV A  R         ++ ++E+  +
Sbjct: 369 MDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSV 428

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + F+++IN   + G + +A    +KMKDSG  P   TY TLI G+      E +L 
Sbjct: 429 IPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALD 488

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIE---------------------------- 152
           + + M  +  V+ N+   + LV       +IE                            
Sbjct: 489 VYRDMLHE-GVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGL 547

Query: 153 -------EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                   A+ V  +++   + PDAV YN         G+   A+  L EM+N  + P++
Sbjct: 548 FKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQ 607

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   +++  C+EG    A++ L  MK   + PNL+ + +L+ G L   ++  V KA  L
Sbjct: 608 ATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLL---EAGVVKKAKFL 664

Query: 266 MEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           + E    G  P  +T   ++ A S +       EI + M+ AG+  DI V++ L      
Sbjct: 665 LNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCC 724

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G  + A  +L  M   G+ P+ + F  +I G C +  +  A +IY +M   G++PN+ T
Sbjct: 725 HGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIAT 784

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           + TLL G   A +   A+ +L  M++ G+ P   T  ++   +
Sbjct: 785 FNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGY 827



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 209/444 (47%), Gaps = 9/444 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G    A  +F  + E G     + YTTL+  L +     +   +  ++ +  +
Sbjct: 509 VNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNL 568

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD++++N  IN     G   EA    ++M+++G +P  +TYNT+I      GK  ++LK
Sbjct: 569 SPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALK 628

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M ++ ++KPN  TY  LV        +++A  ++ +M ++G  P ++T+  + +A 
Sbjct: 629 LLKEMKRN-SIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQAC 687

Query: 181 AQYGETYRAEQMLFE----MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
           +      R   ++ E    M    +  +      +V   C  G   +A   L  M    +
Sbjct: 688 SGS----RRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGI 743

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P+ + FN+LI G       D        M   G+ P++ TF+T++    SAG +G+   
Sbjct: 744 APDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADT 803

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +  DM K G+EP+   + IL  GY +     +A  +   M   G  P    + +++S + 
Sbjct: 804 VLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFA 863

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
            A  M +A  ++ +M   G+     TY+ LL G+ + +       LL+ M+E G +P K 
Sbjct: 864 KAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKG 923

Query: 417 TIQLVADSWRAIGLAREAKRVLKS 440
           TI  ++ ++   G+  EA+R+LK+
Sbjct: 924 TISSMSRAFSRPGMTGEARRLLKT 947



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 101/434 (23%), Positives = 201/434 (46%), Gaps = 7/434 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA+ +F  + + G  P  +TY TL+ +L + +R    L L+ ++   G+  D +++
Sbjct: 306 GQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMY 365

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQL 124
            A+++   + G ++EA  + +  +     P   TY  L+  +   GN+   E+ L    L
Sbjct: 366 TALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVL----L 421

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
             ++K+V PN  T++ ++     +  + +A + + KM  SGI P+ VTY TL   + ++ 
Sbjct: 422 QMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQ 481

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
               A  +  +M +  V  N      +V+G  K GN+E A      M E  +  + V + 
Sbjct: 482 GQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYT 541

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +L+ G     +     K    + E  + PD V ++  ++   + G   + +    +M   
Sbjct: 542 TLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNT 601

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+EPD   ++ +     R G+  KA  +L  M++  + PN++ +TT++ G   A  +++A
Sbjct: 602 GLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKA 661

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             +  +M   G  P   T++ +L     +++P    E+ ++M   G+    +    +   
Sbjct: 662 KFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHV 721

Query: 425 WRAIGLAREAKRVL 438
               G+AR A  VL
Sbjct: 722 LCCHGMARNATVVL 735



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/411 (24%), Positives = 189/411 (45%), Gaps = 1/411 (0%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
           ++ +  L+    + +   + L+++ ++   G+  D + +N+++     SG+ D A+++ +
Sbjct: 187 VVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVE 246

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
           +MK  G +P   TY  LI  Y      +E+  L + M +   V P+  T + LV   C  
Sbjct: 247 RMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVR-SGVLPDVVTLSALVDGLCRD 305

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
               EA+ +  +M   G+ P+ VTY TL  + A+      +  +L EM +  V  +    
Sbjct: 306 GQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMY 365

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             ++    KEG +E+A   L   +   + PN V +  L+       + DG ++ L  MEE
Sbjct: 366 TALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEE 425

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
             V P+VVTFS+I++     G +GK  +    M  +GI P++  +  L  G+ +    + 
Sbjct: 426 KSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEA 485

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  +   M   GV  N  +  ++++G      ++ A ++++ M E G+  +   Y TL+ 
Sbjct: 486 ALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMD 545

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           G  +      A ++ Q + EK + P      +  +    +G   EAK  LK
Sbjct: 546 GLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLK 596



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 197/442 (44%), Gaps = 3/442 (0%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           ++Y   +AAL+ Q   +    ++S++ K G+  D +  +  +     +G V EA  + + 
Sbjct: 116 VSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEM 175

Query: 90  M-KDSGCKPTTST-YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
           + +  G        +N LI GY  V     +L +++ M+  + V  +   YN LV  +  
Sbjct: 176 LVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTT-QGVALDVVGYNSLVAGFFH 234

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
               + A  VV +M A G++P+ VTY  L   Y +      A  +   M  + V P+  T
Sbjct: 235 SGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVT 294

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
              +V G C++G   +A      M ++ V PN V + +LI      +        L  M 
Sbjct: 295 LSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMV 354

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
             GV  D+V ++ +MD     G + + +++        I P+   +++L   + RAG   
Sbjct: 355 SRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNID 414

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            AE +L  M +  V PNVV F+++I+G      + +A     KM + GI PN+ TY TL+
Sbjct: 415 GAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLI 474

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS 447
            G+ + +    A ++ + M  +GV      +  + +  R  G    A+ + K  +E    
Sbjct: 475 DGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLL 534

Query: 448 MPNKKDEIAVESIHRKQNLSAS 469
           + +      ++ + +  N+ A+
Sbjct: 535 LDHVNYTTLMDGLFKTGNMPAA 556



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 151/332 (45%), Gaps = 1/332 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  +A  +   +     +P LITYTTLV  L      K    L++++   G  P S+ 
Sbjct: 620 EGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLT 679

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
              ++ ACS S   D  ++I + M  +G     + YNTL+      G    +  +L  M 
Sbjct: 680 HQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEM- 738

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
             + + P+  T+N L+   C  + ++ A+ +  +M+  G+ P+  T+NTL       G  
Sbjct: 739 LTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRI 798

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+ +L +M+   + PN  T  I+V+GY K+ N  +A+R    M      P    +NSL
Sbjct: 799 GEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSL 858

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +  F      +   +  + M+  GV     T+  +++ WS      + + +  DM + G 
Sbjct: 859 MSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGF 918

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           +P     S +++ + R G   +A  +L ++ K
Sbjct: 919 KPSKGTISSMSRAFSRPGMTGEARRLLKTLFK 950



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 167/357 (46%), Gaps = 6/357 (1%)

Query: 99  TSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN---VKPNDRTYNILVRAWCSKNSIEEAW 155
           T T N++I  Y ++     +L LL+  S  ++   V  +  +YNI + A   +     A 
Sbjct: 76  TLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGRLAP 135

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG--IIVS 213
            V+ +M   G+  D VT +T      + G    A  +   +   +        G   ++ 
Sbjct: 136 PVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALID 195

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
           GYCK  +M  A+  + RM    V  ++V +NSL+ GF    D+D   + +  M+  GV+P
Sbjct: 196 GYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEP 255

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           +VVT++ ++  +     M +   +++ MV++G+ PD+   S L  G  R G+  +A ++ 
Sbjct: 256 NVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALF 315

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M K GV PN V + T+I     A +   ++ +  +M   G+  +L  Y  L+   G+ 
Sbjct: 316 REMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKE 375

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            +   A+++L+  +   + P   T  ++ D+    G    A++VL   EE +  +PN
Sbjct: 376 GKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEE-KSVIPN 431



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 151/361 (41%), Gaps = 42/361 (11%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D++ +N  + A SE G+   A  +  +M   G      T +T + G    G   E+  L 
Sbjct: 114 DTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALA 173

Query: 123 QLMSQDKNVKPNDRT-YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           +++ + + +   D   +N L+  +C    +  A  VV +M   G+  D V YN+L     
Sbjct: 174 EMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSL----- 228

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
                                         V+G+   G+ + A+  + RMK   V PN+V
Sbjct: 229 ------------------------------VAGFFHSGDADAALEVVERMKADGVEPNVV 258

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
            + +LI  +   K   G+D+A +L E     GV PDVVT S ++D     G   +   +F
Sbjct: 259 TYTALIGEYCKGK---GMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALF 315

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
            +M K G+ P+   +  L     +A    ++  +L  M   GV  ++VM+T ++      
Sbjct: 316 REMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKE 375

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            K++ A  +        I PN  TY  L+  +  A     AE++L  MEEK V P   T 
Sbjct: 376 GKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTF 435

Query: 419 Q 419
            
Sbjct: 436 S 436


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 210/407 (51%), Gaps = 12/407 (2%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G++ + ++   L+ AL +Q R   +  L  ++ +  ++P+   FN +INA  ++G +++A
Sbjct: 183 GYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
             + + MK  G  P   +YNTLI GY   G  GK  ++  +L+ M +++ V PN  T+NI
Sbjct: 243 RDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENE-VSPNLTTFNI 301

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+  +   +++  +  V  +M+   + P+ +TYN+L       G+   A  M  +M +  
Sbjct: 302 LIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAG 361

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           V+PN  T   +++G+CK G M++A+     +K     P   ++N LI  +  +     +D
Sbjct: 362 VQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGK---ID 418

Query: 261 KALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
               L EE    G+ PDV T++ ++      G +   +++FD +   G+ PD+  F IL 
Sbjct: 419 DGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILM 477

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM-CEIGI 376
           +GY   GE +KA  +L  M K G+ P  + +  ++ G+C    ++ A ++  +M  E  +
Sbjct: 478 EGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRL 537

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
             N+ +Y  LL GY +  +   A  LL  M EKG+ P + T ++V +
Sbjct: 538 RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKE 584



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 176/324 (54%), Gaps = 10/324 (3%)

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG---E 185
           + ++PN  T+N+++ A C    + +A +V+  M   G  P+ V+YNTL   Y + G   +
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGK 276

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
            Y+A+ +L EM  N+V PN  T  I++ G+ K+ N+  +++    M + +V PN++ +NS
Sbjct: 277 MYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNS 336

Query: 246 LIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           LI G  +      +++A+ + ++    GV+P+++T+ ++++ +   G+M +  ++FD + 
Sbjct: 337 LINGLCN---GGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVK 393

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G  P   ++++L   Y + G+     ++   M + G+ P+V  +  +I+G C    ++
Sbjct: 394 GQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A  +++++   G+ P+L T+  L+ GY    +  +A  LL+ M + G++P+  T  ++ 
Sbjct: 454 AAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMM 512

Query: 423 DSWRAIGLAREAKRVLKSAEEDRQ 446
             +   G  + A  +    E++R+
Sbjct: 513 KGYCKEGNLKAATNMRTQMEKERR 536



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 156/306 (50%), Gaps = 21/306 (6%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  ++++   P +ITY +L+  L    +    + +  K+   G++P+ I ++++IN   
Sbjct: 318 VFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFC 377

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           ++G + EA+ +F  +K  G +PTT  YN LI  Y  +GK ++   L + M ++  + P+ 
Sbjct: 378 KNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMERE-GIVPDV 436

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TYN L+   C   +IE A  +  ++   G+ PD VT++ L   Y   GE+ +A  +L E
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKE 495

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM-KELEVHPNLVVFNSLIKGFLDIK 254
           M    ++P   T  I++ GYCKEGN++ A     +M KE  +  N+  +N L++G+    
Sbjct: 496 MSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI--HV 312
             +  +  L  M E G+ P+ +T+  +                 ++MV  G  PDI  H+
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITYEIVK----------------EEMVDKGFVPDIEGHL 599

Query: 313 FSILAK 318
           F++  K
Sbjct: 600 FNVSTK 605



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 175/356 (49%), Gaps = 8/356 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTR----QKRFKSILSLISKVE 56
           +N L   GK ++A  +   +   G+ P +++Y TL+    +     K +K+   L   VE
Sbjct: 230 INALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVE 289

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
            + + P+   FN +I+   +  N+  ++K+F++M D    P   TYN+LI G  N GK  
Sbjct: 290 NE-VSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKIN 348

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           E++ +   M     V+PN  TY+ L+  +C    ++EA ++   +   G +P    YN L
Sbjct: 349 EAIGMRDKMVS-AGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNML 407

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
             AY + G+      +  EM+   + P+  T   +++G C+ GN+E A +   ++    +
Sbjct: 408 IDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL 467

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P+LV F+ L++G+    +S      L  M + G+KP  +T++ +M  +   G +     
Sbjct: 468 -PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATN 526

Query: 297 IFDDMVKA-GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
           +   M K   +  ++  +++L +GY + G+ + A  +L  M + G+ PN + +  V
Sbjct: 527 MRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 156/322 (48%), Gaps = 3/322 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G GK ++A  +   ++E    P L T+  L+    +       L +  ++    + P+
Sbjct: 271 LGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPN 330

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I +N++IN     G ++EA+ +  KM  +G +P   TY++LI G+   G  +E+L +  
Sbjct: 331 VITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFD 390

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            + + +  +P  R YN+L+ A+C    I++ + +  +M   GI PD  TYN L     + 
Sbjct: 391 SV-KGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A + LF+   N+  P+  T  I++ GYC  G    A   L  M ++ + P  + +
Sbjct: 450 GNI-EAAKKLFDQLTNKGLPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTY 508

Query: 244 NSLIKGFLDIKDSDGVDKALTLME-EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           N ++KG+    +        T ME E  ++ +V +++ ++  +S  G +     + ++M+
Sbjct: 509 NIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568

Query: 303 KAGIEPDIHVFSILAKGYVRAG 324
           + G+ P+   + I+ +  V  G
Sbjct: 569 EKGLVPNRITYEIVKEEMVDKG 590



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 148/302 (49%), Gaps = 4/302 (1%)

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+ A   +N   +   +  +M+   IQP+  T+N +  A  + G+  +A  ++ +M+   
Sbjct: 194 LMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 201 VRPNERTCGIIVSGYCK---EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
             PN  +   ++ GYCK    G M  A   L  M E EV PNL  FN LI GF    +  
Sbjct: 254 YSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLP 313

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
           G  K    M +  V P+V+T++++++   + G + +   + D MV AG++P++  +  L 
Sbjct: 314 GSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLI 373

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            G+ + G  ++A  +  S++  G  P   M+  +I  +C   K+    ++ E+M   GI 
Sbjct: 374 NGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           P++ TY  L+ G         A++L   +  KG+ P   T  ++ + + + G +R+A  +
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAML 492

Query: 438 LK 439
           LK
Sbjct: 493 LK 494



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/322 (22%), Positives = 148/322 (45%), Gaps = 5/322 (1%)

Query: 100 STYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVY 159
           S   + + G+   G   +   +   +S   NV  N    ++LV A+ + +  E  +    
Sbjct: 118 SKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFK 177

Query: 160 KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEG 219
           +    G +  A++   L  A  +   +   E +  EM   +++PN  T  ++++  CK G
Sbjct: 178 RSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTG 237

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVV 276
            M  A   +  MK     PN+V +N+LI G+  +  +  + KA  +++E     V P++ 
Sbjct: 238 KMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLT 297

Query: 277 TFSTIMDA-WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           TF+ ++D  W    L G  + +F +M+   + P++  ++ L  G    G+  +A  +   
Sbjct: 298 TFNILIDGFWKDDNLPGSLK-VFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDK 356

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M   GV PN++ + ++I+G+C    M+ A+ +++ +   G  P  + Y  L+  Y +  +
Sbjct: 357 MVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGK 416

Query: 396 PWRAEELLQVMEEKGVRPKKST 417
                 L + ME +G+ P   T
Sbjct: 417 IDDGFALKEEMEREGIVPDVGT 438


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 221/474 (46%), Gaps = 40/474 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + IL  K    +A  ++  + E G RPT+ TY T++ +  +    +  L L+ K+++ G 
Sbjct: 209 LKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGC 268

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + FN +IN  S+ G + +A  + Q+M  +G + +  TYN LI GY   G   E+L 
Sbjct: 269 YPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALA 328

Query: 121 LLQLMSQ----------------------------------DKNVKPNDRTYNILVRAWC 146
           L + M                                     KN+ P+  +YN L+  +C
Sbjct: 329 LWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFC 388

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
              +I EA+ ++ ++    +  + VTYNTL     + G+   A ++  +M N  + P+  
Sbjct: 389 RLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVV 448

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T  ++V+G CK GNM  A  F   M  + + P+   + + I G L + D+    KA  L 
Sbjct: 449 TYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDT---AKAFKLQ 505

Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           EE    G  PDV+T++  ++     G + +  E+   M++ G  PD   ++     ++  
Sbjct: 506 EEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMEN 565

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G  ++   I   M   G  P VV +T +I       ++  AM+ + +M E G+ PN+ TY
Sbjct: 566 GHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITY 625

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
             L+ G+ + ++  +A +    M+EKG+ P K T  ++ +    +G  +EA R+
Sbjct: 626 NVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRL 679



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 204/420 (48%), Gaps = 7/420 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L+G    ++   +F  ++     P +     ++  L  +      L +   + + G+
Sbjct: 174 VDVLIGGYLNYQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGI 233

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P    +N M+++  + G V  A+ +  KM++ GC P+  T+N LI G    G+ +++  
Sbjct: 234 RPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKG 293

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L+Q M++   ++ +  TYN L+  +C K  + EA  +  +MV  G+ P   ++NT+   +
Sbjct: 294 LIQEMAK-AGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGF 352

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A Q L +M    + P+  +   ++ G+C+ GN+ +A   L  ++   +  N+
Sbjct: 353 CKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNI 412

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +N+LI G   + D   ++ AL L E+    G+ PDVVT++ +++     G M   +E 
Sbjct: 413 VTYNTLIDGLCRLGD---LETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEF 469

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           FD+M+  G+ PD   ++    G ++ G+  KA  +   M   G  P+V+ +   ++G C 
Sbjct: 470 FDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCK 529

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              ++ A  + +KM   G  P+  TY + +  + E        E+   M  +G  P   T
Sbjct: 530 LGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVT 589



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 178/381 (46%), Gaps = 1/381 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG   EA  ++  ++  G  PT+ ++ T++    ++ +       +S + K  + PD I 
Sbjct: 320 KGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIIS 379

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I      GN+ EA  +  +++         TYNTLI G   +G  E +LKL + M 
Sbjct: 380 YNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMI 439

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            ++ + P+  TY +LV   C   ++  A     +M+  G+ PD   Y        + G+T
Sbjct: 440 -NRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDT 498

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A ++  EM      P+  T  + V+G CK GN+E+A   L +M      P+ V + S 
Sbjct: 499 AKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSF 558

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +   ++        +    M   G  P VVT++ ++ A +  G +      F +M + G+
Sbjct: 559 MHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGV 618

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P++  +++L  G+ +  +  +A      M++ G+ PN   +T +I+  CN  K Q A+ 
Sbjct: 619 VPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALR 678

Query: 367 IYEKMCEIGINPNLKTYETLL 387
           +Y +M    I P+  T+  LL
Sbjct: 679 LYAQMLGKRIRPDSCTHGALL 699



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/440 (22%), Positives = 200/440 (45%), Gaps = 15/440 (3%)

Query: 9   KPHEAHYIFNC-LIEEGHRPTLITYTTLVAALTRQKRFKS---ILSLISKVEKDGMKPDS 64
           KP  A   F C L + G + +   +  ++  L      KS   ++  I   E  G+    
Sbjct: 118 KPTIALRFFKCVLTQPGFKTSEYAFCAILQILVDNCLMKSAYWVMERIISFEMYGIV--D 175

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           +L    +N         + + +F+KM  +   P     N ++K   +     ++L++ ++
Sbjct: 176 VLIGGYLNY--------QCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRM 227

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M +   ++P   TYN ++ ++C    ++ A ++V KM   G  P  VT+N L    ++ G
Sbjct: 228 MGE-YGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKG 286

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           E  +A+ ++ EM    +R +  T   ++ GYCK+G + +A+     M    V P +   N
Sbjct: 287 ELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHN 346

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +++ GF          + L+ M +  + PD+++++T++  +   G +G+   + D++   
Sbjct: 347 TIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFR 406

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
            +  +I  ++ L  G  R G+ + A  +   M   G+HP+VV +T +++G C    M  A
Sbjct: 407 NLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMA 466

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
              +++M  +G+ P+   Y   + G  +     +A +L + M  KG  P   T  +  + 
Sbjct: 467 KEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNG 526

Query: 425 WRAIGLAREAKRVLKSAEED 444
              +G   EA  +L+    D
Sbjct: 527 LCKLGNLEEAGELLQKMIRD 546



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 104/209 (49%), Gaps = 2/209 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++ +G  P +ITY   V  L +    +    L+ K+ +DG  PD + + + ++A  E+G+
Sbjct: 508 MLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGH 567

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           + E  +IF  M   G  PT  TY  LI  +   G+ + ++    L  Q+K V PN  TYN
Sbjct: 568 LREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYF-LEMQEKGVVPNVITYN 626

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           +L+  +C    +++A     +M   GI P+  TY  L       G+   A ++  +M   
Sbjct: 627 VLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGK 686

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           ++RP+  T G ++    K+  ++ A++F+
Sbjct: 687 RIRPDSCTHGALLKKLDKDYKVQ-AVQFI 714



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 1/178 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G   EA  +   +I +GH P  +TYT+ + A       +    +   +   G 
Sbjct: 524 VNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQ 583

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + +  +I+A + +G +D AM  F +M++ G  P   TYN LI G+  V K +++ K
Sbjct: 584 TPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACK 643

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
               M Q+K + PN  TY IL+   C+    +EA  +  +M+   I+PD+ T+  L +
Sbjct: 644 FFIEM-QEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLK 700


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 204/398 (51%), Gaps = 1/398 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G  P++ T+TT++ AL R+        L   ++  G+ P++ ++N +++   ++  
Sbjct: 308 MVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKARE 367

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V +A  ++++M+ +G  P   T+N L+ G+   G+ E+S +LL+ +     +  +   Y+
Sbjct: 368 VAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIV-SGLFLDSSLYD 426

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           ++V + C    ++EA  ++ +++  G+    V +N+L  AY++ G   +A +    M   
Sbjct: 427 VMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRC 486

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+  TC  ++ G C++G +++A   LYRM E     N V +  L+ G+  + + +G 
Sbjct: 487 GFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGA 546

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
                 M+E G+ PD V F+ ++D  S AG + +  E+F +M   G  P+   ++ L +G
Sbjct: 547 QFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRG 606

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
               G   +A  +   MR+ G+  +   F  +I G+C   +M+ A+  +  M  IG+ P+
Sbjct: 607 LCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPD 666

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           + T+  L+ GY +A     A E++  M   G+ P  +T
Sbjct: 667 IFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITT 704



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 198/410 (48%), Gaps = 1/410 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  +I +G RP+ +T+  ++    RQ R     SL+  + K    PD + FN +INAC 
Sbjct: 234 LFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACC 293

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
             G    A+     M  SG +P+ +T+ T++      G   E+ KL   + QD  + PN 
Sbjct: 294 IGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGI-QDMGIAPNA 352

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
             YN L+  +     + +A  +  +M  +G+ PD VT+N L   + +YG    ++++L +
Sbjct: 353 AIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKD 412

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           +  + +  +     ++VS  C  G +++AM+ L  + E  +  ++V FNSLI  +     
Sbjct: 413 LIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGL 472

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D   +A  +M   G  P   T ++++      G + + + +   M++ G   +   +++
Sbjct: 473 EDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTV 532

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  GY +    + A+ +   M++ G++P+ V FT +I G   A  ++ A  ++ +M  IG
Sbjct: 533 LLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIG 592

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
             PN   Y +L+ G  +  +   A +L + M +KG+     T  ++ D +
Sbjct: 593 FVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGF 642



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 186/413 (45%), Gaps = 41/413 (9%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P  +T+  LV    +  R +    L+  +   G+  DS L++ M+++   +G +DEA
Sbjct: 382 GVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEA 441

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           MK+ Q++ + G   +   +N+LI  Y   G  +++ +  ++M +     P+  T N L+ 
Sbjct: 442 MKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVR-CGFTPSSSTCNSLLM 500

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C K  ++EA  ++Y+M+  G   + V Y  L   Y +      A+ +  EM+   + P
Sbjct: 501 GLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYP 560

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +      ++ G  K GN+E+A      M  +   PN   +NSLI+G   + D   V +AL
Sbjct: 561 DAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRG---LCDCGRVTEAL 617

Query: 264 TL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
            L   M + G+  D  TF+ I+D +   G M    E F DM + G+ PDI  F+IL  GY
Sbjct: 618 KLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGY 677

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM------------------- 361
            +A +   A  I+  M   G+ P++  + T + G+C   KM                   
Sbjct: 678 CKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDT 737

Query: 362 ---------------QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
                           RAM +  K+ ++G  PN+ T   LL  + +   P +A
Sbjct: 738 VTYNTMLSGICSDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKA 790



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 174/387 (44%), Gaps = 2/387 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  EA  +   L+E+G   +++ + +L+ A +R             + + G  P 
Sbjct: 432 LCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPS 491

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           S   N+++      G + EA  +  +M + G       Y  L+ GY  +   E +  L +
Sbjct: 492 SSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWK 551

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +++ + P+   +  L+       ++EEA+ V  +M A G  P+   YN+L R     
Sbjct: 552 EM-KERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDC 610

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A ++  EM+   +  +  T  II+ G+C+ G M+ A+     M+ + + P++  F
Sbjct: 611 GRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTF 670

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N LI G+    D  G  + +  M   G+ PD+ T++T M  +     M +   I D ++ 
Sbjct: 671 NILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLIS 730

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           AGI PD   ++ +  G + +    +A  +   + K G  PNV+    ++S +C     ++
Sbjct: 731 AGIVPDTVTYNTMLSG-ICSDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEK 789

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGY 390
           A+   +K+ EI    +  +Y  L   Y
Sbjct: 790 ALIWGQKLREISFGFDEISYRILDQAY 816



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/435 (23%), Positives = 197/435 (45%), Gaps = 9/435 (2%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D  + N ++      G   EA+++ + M+  G +P  S+   L++    +G      KL 
Sbjct: 176 DFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLF 235

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           + M   K  +P++ T+N ++  +C ++ +    ++++ M      PD VT+N L  A   
Sbjct: 236 KDMIF-KGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCI 294

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G T+ A   L  M  + V P+  T   I+   C+EGN+ +A +    ++++ + PN  +
Sbjct: 295 GGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAI 354

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +N+L+ G+   ++   V +A  L EE    GV PD VTF+ ++      G +     +  
Sbjct: 355 YNTLMDGYFKARE---VAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLK 411

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           D++ +G+  D  ++ ++      AG   +A  +L  + + G+  +VV F ++I  +  A 
Sbjct: 412 DLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAG 471

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
              +A   Y  M   G  P+  T  +LL G         A  LL  M EKG    K    
Sbjct: 472 LEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYT 531

Query: 420 LVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIA-VESIHRKQNLSASNSTFLQIPG 478
           ++ D +  +     A+ + K  +E R   P+     A ++ + +  N+  +   FL++  
Sbjct: 532 VLLDGYFKMNNLEGAQFLWKEMKE-RGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSA 590

Query: 479 VVSSEHNGSSAAKIR 493
           +    +N +  + IR
Sbjct: 591 IGFVPNNFAYNSLIR 605



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 130/277 (46%)

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR 226
           + D    NTL R +   G  + A ++L  M+   VRP   +  I++    + G+     +
Sbjct: 174 ESDFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWK 233

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
               M      P+ + FN++I GF         +  L LM +F   PDVVTF+ +++A  
Sbjct: 234 LFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACC 293

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
             G      +    MV++G+EP +  F+ +     R G   +A  +   ++  G+ PN  
Sbjct: 294 IGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAA 353

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
           ++ T++ G+  A ++ +A  +YE+M   G++P+  T+  L+WG+ +  +   ++ LL+ +
Sbjct: 354 IYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDL 413

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
              G+    S   ++  S    G   EA ++L+   E
Sbjct: 414 IVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLE 450



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/320 (22%), Positives = 135/320 (42%), Gaps = 68/320 (21%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  KG   EA  +   ++E+G     + YT L+    +    +    L  ++++ G+ PD
Sbjct: 502 LCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPD 561

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ F A+I+  S++GNV+EA ++F +M   G  P    YN+LI+G  + G+  E+LKL +
Sbjct: 562 AVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEK 621

Query: 124 LMS----------------------------------QDKNVKPNDRTYNILVRAWCSKN 149
            M                                   Q   + P+  T+NIL+  +C   
Sbjct: 622 EMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAF 681

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            +  A  +V KM + G+ PD  TYNT    Y +  +  +A  +L ++ +  + P+  T  
Sbjct: 682 DMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYN 741

Query: 210 IIVSG----------------------------------YCKEGNMEDAMRFLYRMKELE 235
            ++SG                                  +CK+G  E A+ +  +++E+ 
Sbjct: 742 TMLSGICSDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREIS 801

Query: 236 VHPNLVVFNSLIKGFLDIKD 255
              + + +  L + +  ++D
Sbjct: 802 FGFDEISYRILDQAYCLMQD 821


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/491 (24%), Positives = 229/491 (46%), Gaps = 46/491 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G+  EA  +F  +   G  P ++TY +L+    +    + +  L+S++ K G 
Sbjct: 206 IDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGC 265

Query: 61  KPDSILFNAMINACS-----------------------------------ESGNVDEAMK 85
             D + +NA+IN  S                                   + G V EAMK
Sbjct: 266 AADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMK 325

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +F +M+  G  P   TY +L+ G    G+ ++++ LL  M   + + PN  TY ++V   
Sbjct: 326 LFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVH-QGLVPNVVTYTVMVDGL 384

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C +  +  A +V+  M  +G++ + + Y TL   +     + RA  +L EM+N  +  + 
Sbjct: 385 CKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDV 444

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI-KDSDGVDKALT 264
              G ++ G CK   +++A   L++M +  + PN V++ +++  F    K+S+ V   L 
Sbjct: 445 SLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAV-ALLH 503

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            + + G++P+VVT+  ++D    AG + +    FD M + G++P++ V++ L  G+ + G
Sbjct: 504 KIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIG 563

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              KA  ++  M   G+  + V++T++I G      +Q A ++  KM E G+  +L  Y 
Sbjct: 564 SLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYT 623

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG-------LAREAKRV 437
             + G+        A  +L  M   G+ P K+    +   ++ +G       L  E + V
Sbjct: 624 CFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMESV 683

Query: 438 LKSA-EEDRQS 447
           L S  EED  S
Sbjct: 684 LSSCTEEDTAS 694



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 197/406 (48%), Gaps = 8/406 (1%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P+   FN +I+   + G + EA  +F +MK  GC P   TYN+LI GYG  G+ EE ++L
Sbjct: 197 PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEE-VEL 255

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           L    +      +  TYN L+  +     IE+A++   +M   G+  + VT +T   A+ 
Sbjct: 256 LVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFC 315

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           + G    A ++  +M+   + PNE T   +V G CK G ++DA+  L  M    + PN+V
Sbjct: 316 KEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVV 375

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            +  ++ G          D  L+LME  GVK + + ++T++          +  ++ ++M
Sbjct: 376 TYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEM 435

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
              G+E D+ ++  L  G  +  +  +A+S+L  M   G+ PN V++TT++  +  A K 
Sbjct: 436 KNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKE 495

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             A+++  K+ + G+ PN+ TY  L+ G  +A   + A      M E G+ P       +
Sbjct: 496 SEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTL 555

Query: 422 ADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESI---HRKQ 464
            D +  IG   +A  ++    +   S+    D++   S+   H KQ
Sbjct: 556 IDGFCKIGSLSKAVHLMNEMVDKGMSL----DKVVYTSLIDGHMKQ 597



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 203/441 (46%), Gaps = 18/441 (4%)

Query: 4   LVGKG-KPHEAHYIFNCLIEEG-----HRPTLIT-YTTLVAALTRQKRFKSILSLISKVE 56
           L+G G +PH A  + + L         HR  L + + TL++ L         +  +++V 
Sbjct: 101 LLGAGHRPHLAASLVDILHRAALALGPHRSALPSVFDTLLSLLADHGLLDDAVRALARVR 160

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           +  + P++   N ++   + +       ++F+ +      P   T+N +I      G+  
Sbjct: 161 QLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLP----APNVFTFNIVIDFLCKQGELV 216

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           E+  L   M +     P+  TYN L+  +     +EE   +V +M  SG   D VTYN L
Sbjct: 217 EARALFVRM-KAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNAL 275

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
              ++++G   +A     EM+   V  N  T    V  +CKEG + +AM+   +M+   +
Sbjct: 276 INCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGM 335

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGK 293
            PN   + SL+ G      +  +D A+ L++E    G+ P+VVT++ ++D     G +  
Sbjct: 336 MPNEFTYTSLVDG---TCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAV 392

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
             ++   M +AG++ +  +++ L  G+      ++A  +L  M+  G+  +V ++ T+I 
Sbjct: 393 ADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIW 452

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G C   K+  A S+  KM + G+ PN   Y T++  + +A +   A  LL  + + G++P
Sbjct: 453 GLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQP 512

Query: 414 KKSTIQLVADSWRAIGLAREA 434
              T   + D     G   EA
Sbjct: 513 NVVTYCALIDGLCKAGSIYEA 533



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 134/266 (50%), Gaps = 13/266 (4%)

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
            ++TL    A +G    A + L  ++  +V PN RTC  I+    +  N +  +  + R+
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLAR--NRQGGL--VRRL 190

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVD-KALTL-MEEFGVKPDVVTFSTIMDAWSSAG 289
            E    PN+  FN +I  FL  K  + V+ +AL + M+  G  PDVVT+++++D +   G
Sbjct: 191 FEHLPAPNVFTFNIVID-FL-CKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCG 248

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
            + + + +  +M K+G   D+  ++ L   + + G  +KA S    M++ GV  NVV  +
Sbjct: 249 ELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLS 308

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
           T +  +C    ++ AM ++ +M   G+ PN  TY +L+ G  +A +   A  LL  M  +
Sbjct: 309 TFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ 368

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAK 435
           G+ P   T  ++ D     GL +E K
Sbjct: 369 GLVPNVVTYTVMVD-----GLCKEGK 389


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 102/446 (22%), Positives = 209/446 (46%), Gaps = 39/446 (8%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  EA  + + ++  G +P+++TYT L+ A+ +   F   + ++ ++   G  P+
Sbjct: 186 LCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPN 245

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +IN     G VD+A +   ++   G +P T +Y T++KG     + E+  +L  
Sbjct: 246 IVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFA 305

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS------------------- 164
            M  +KN  PN+ T+++LVR +C    +E A  V+ +M                      
Sbjct: 306 EM-MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQ 364

Query: 165 ----------------GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
                           G  PD ++Y T+ +   +      A+++L EM      PNE T 
Sbjct: 365 GRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTF 424

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
              +   C++G +E A   + +M E     N+V +N+L+ GF        VD AL L   
Sbjct: 425 NTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFC---VQGRVDSALELFYS 481

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
              KP+ +T++T++    +A  +    E+  +M++    P++  F++L   + + G   +
Sbjct: 482 MPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDE 541

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  ++  M ++G  PN++ + T++ G       + A+ +   +   G++P++ TY +++ 
Sbjct: 542 AIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIG 601

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPK 414
                 +   A ++  ++++ G+RPK
Sbjct: 602 VLSREDRVEEAIKMFHIVQDLGMRPK 627



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 188/397 (47%), Gaps = 4/397 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   TYT ++  L  + R    LSL+  +   G +P  + +  ++ A  +S    +AM++
Sbjct: 174 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEV 233

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M+  GC P   TYN +I G    G+ +++ + L  +S     +P+  +Y  +++  C
Sbjct: 234 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSS-YGFQPDTVSYTTVLKGLC 292

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           +    E+   +  +M+     P+ VT++ L R + + G   RA Q+L +M  +    N  
Sbjct: 293 AAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTT 352

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
            C I+++  CK+G ++DA +FL  M      P+ + + +++KG    +  +   + L  M
Sbjct: 353 LCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEM 412

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
                 P+ VTF+T +      GL+ +   + + M + G E +I  ++ L  G+   G  
Sbjct: 413 VRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV 472

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             A  +  SM      PN + +TT+++G CNA ++  A  +  +M +    PN+ T+  L
Sbjct: 473 DSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVL 529

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           +  + +      A EL++ M E G  P   T   + D
Sbjct: 530 VSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLD 566



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/411 (25%), Positives = 188/411 (45%), Gaps = 9/411 (2%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  ++E+   P  +T+  LV    R    +  + ++ ++   G   ++ L N +IN   
Sbjct: 303 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTIC 362

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G VD+A +    M   GC P T +Y T++KG     + E++ +LL+ M + KN  PN+
Sbjct: 363 KQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR-KNCPPNE 421

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            T+N  +   C K  IE+A  ++ +M   G + + VTYN L   +   G    A ++ + 
Sbjct: 422 VTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYS 481

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M     +PN  T   +++G C    ++ A   L  M + +  PN+V FN L+  F     
Sbjct: 482 MP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGL 538

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D   + +  M E G  P+++T++T++D  +      +  E+   +V  G+ PDI  +S 
Sbjct: 539 MDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSS 598

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           +     R    ++A  +   ++  G+ P  V++  ++   C       A+  +  M   G
Sbjct: 599 IIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG 658

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
             PN  TY TL+ G           +LL+ +  +GV  K      + + WR
Sbjct: 659 CMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKN-----LLEEWR 704



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 185/410 (45%), Gaps = 11/410 (2%)

Query: 51  LISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG 110
           L+ +    G  PD  L   +I      G   +A ++ +  + SG       YNTL+ GY 
Sbjct: 96  LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYC 155

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
             G+ + + +L+  M     V P+  TY  ++R  C +  + EA +++  M+  G QP  
Sbjct: 156 RYGQLDAARRLIASMP----VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV 211

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           VTY  L  A  +     +A ++L EM+     PN  T  +I++G C+EG ++DA  FL R
Sbjct: 212 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNR 271

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
           +      P+ V + +++KG    K  + V++    M E    P+ VTF  ++  +   G+
Sbjct: 272 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 331

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           + +  ++ + M   G   +  + +I+     + G    A   L +M  YG  P+ + +TT
Sbjct: 332 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 391

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           V+ G C A + + A  + ++M      PN  T+ T +    +     +A  L++ M E G
Sbjct: 392 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 451

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESI 460
                 T   + + +   G      RV  SA E   SMP K + I   ++
Sbjct: 452 CEVNIVTYNALVNGFCVQG------RV-DSALELFYSMPCKPNTITYTTL 494



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 163/342 (47%), Gaps = 6/342 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  +G+  +A    N +   G  P  I+YTT++  L R +R++    L+ ++ +   
Sbjct: 358 INTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNC 417

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + FN  I    + G +++A  + ++M + GC+    TYN L+ G+   G+ + +L+
Sbjct: 418 PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE 477

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M      KPN  TY  L+   C+   ++ A  ++ +M+     P+ VT+N L   +
Sbjct: 478 LFYSMP----CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 533

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G    A +++ +M  +   PN  T   ++ G  K+ N E+A+  L+ +    V P++
Sbjct: 534 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDI 593

Query: 241 VVFNSLIKGFLDIKDS-DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           V ++S+I G L  +D  +   K   ++++ G++P  V ++ I+ A           + F 
Sbjct: 594 VTYSSII-GVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFA 652

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
            MV  G  P+   +  L +G       ++   +L  +   GV
Sbjct: 653 YMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 133/290 (45%), Gaps = 9/290 (3%)

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A  +V +  + G  PD      L R   + G T  A ++L   + +    +      +V+
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---G 270
           GYC+ G ++ A R +  M    V P+   +  +I+G     D   V +AL+L+++    G
Sbjct: 153 GYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLC---DRGRVGEALSLLDDMLHRG 206

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
            +P VVT++ +++A   +   G+  E+ D+M   G  P+I  ++++  G  R G    A 
Sbjct: 207 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 266

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
             L  +  YG  P+ V +TTV+ G C A + +    ++ +M E    PN  T++ L+  +
Sbjct: 267 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 326

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
                  RA ++L+ M   G     +   +V ++    G   +A + L +
Sbjct: 327 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNN 376



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 114/252 (45%), Gaps = 3/252 (1%)

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           RA +++    +    P+   C  ++   C+ G   DA R L   +      ++  +N+L+
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G+        +D A  L+    V PD  T++ I+      G +G+   + DDM+  G +
Sbjct: 152 AGYCRYGQ---LDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 208

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P +  +++L +   ++    +A  +L  MR  G  PN+V +  +I+G C   ++  A   
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 268

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
             ++   G  P+  +Y T+L G   AK+    EEL   M EK   P + T  ++   +  
Sbjct: 269 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 328

Query: 428 IGLAREAKRVLK 439
            G+   A +VL+
Sbjct: 329 GGMVERAIQVLE 340


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 102/446 (22%), Positives = 209/446 (46%), Gaps = 39/446 (8%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  EA  + + ++  G +P+++TYT L+ A+ +   F   + ++ ++   G  P+
Sbjct: 155 LCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPN 214

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +IN     G VD+A +   ++   G +P T +Y T++KG     + E+  +L  
Sbjct: 215 IVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFA 274

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS------------------- 164
            M  +KN  PN+ T+++LVR +C    +E A  V+ +M                      
Sbjct: 275 EM-MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQ 333

Query: 165 ----------------GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
                           G  PD ++Y T+ +   +      A+++L EM      PNE T 
Sbjct: 334 GRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTF 393

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
              +   C++G +E A   + +M E     N+V +N+L+ GF        VD AL L   
Sbjct: 394 NTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFC---VQGRVDSALELFYS 450

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
              KP+ +T++T++    +A  +    E+  +M++    P++  F++L   + + G   +
Sbjct: 451 MPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDE 510

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  ++  M ++G  PN++ + T++ G       + A+ +   +   G++P++ TY +++ 
Sbjct: 511 AIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIG 570

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPK 414
                 +   A ++  ++++ G+RPK
Sbjct: 571 VLSREDRVEEAIKMFHIVQDLGMRPK 596



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 188/397 (47%), Gaps = 4/397 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   TYT ++  L  + R    LSL+  +   G +P  + +  ++ A  +S    +AM++
Sbjct: 143 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEV 202

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M+  GC P   TYN +I G    G+ +++ + L  +S     +P+  +Y  +++  C
Sbjct: 203 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSS-YGFQPDTVSYTTVLKGLC 261

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           +    E+   +  +M+     P+ VT++ L R + + G   RA Q+L +M  +    N  
Sbjct: 262 AAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTT 321

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
            C I+++  CK+G ++DA +FL  M      P+ + + +++KG    +  +   + L  M
Sbjct: 322 LCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEM 381

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
                 P+ VTF+T +      GL+ +   + + M + G E +I  ++ L  G+   G  
Sbjct: 382 VRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV 441

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             A  +  SM      PN + +TT+++G CNA ++  A  +  +M +    PN+ T+  L
Sbjct: 442 DSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVL 498

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           +  + +      A EL++ M E G  P   T   + D
Sbjct: 499 VSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLD 535



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 103/411 (25%), Positives = 188/411 (45%), Gaps = 9/411 (2%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  ++E+   P  +T+  LV    R    +  + ++ ++   G   ++ L N +IN   
Sbjct: 272 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTIC 331

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G VD+A +    M   GC P T +Y T++KG     + E++ +LL+ M + KN  PN+
Sbjct: 332 KQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR-KNCPPNE 390

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            T+N  +   C K  IE+A  ++ +M   G + + VTYN L   +   G    A ++ + 
Sbjct: 391 VTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYS 450

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M     +PN  T   +++G C    ++ A   L  M + +  PN+V FN L+  F     
Sbjct: 451 MP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGL 507

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D   + +  M E G  P+++T++T++D  +      +  E+   +V  G+ PDI  +S 
Sbjct: 508 MDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSS 567

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           +     R    ++A  +   ++  G+ P  V++  ++   C       A+  +  M   G
Sbjct: 568 IIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG 627

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
             PN  TY TL+ G           +LL+ +  +GV  K      + + WR
Sbjct: 628 CMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKN-----LLEEWR 673



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 185/410 (45%), Gaps = 11/410 (2%)

Query: 51  LISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG 110
           L+ +    G  PD  L   +I      G   +A ++ +  + SG       YNTL+ GY 
Sbjct: 65  LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYC 124

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
             G+ + + +L+  M     V P+  TY  ++R  C +  + EA +++  M+  G QP  
Sbjct: 125 RYGQLDAARRLIASMP----VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV 180

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           VTY  L  A  +     +A ++L EM+     PN  T  +I++G C+EG ++DA  FL R
Sbjct: 181 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNR 240

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
           +      P+ V + +++KG    K  + V++    M E    P+ VTF  ++  +   G+
Sbjct: 241 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 300

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           + +  ++ + M   G   +  + +I+     + G    A   L +M  YG  P+ + +TT
Sbjct: 301 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 360

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           V+ G C A + + A  + ++M      PN  T+ T +    +     +A  L++ M E G
Sbjct: 361 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESI 460
                 T   + + +   G      RV  SA E   SMP K + I   ++
Sbjct: 421 CEVNIVTYNALVNGFCVQG------RV-DSALELFYSMPCKPNTITYTTL 463



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 163/342 (47%), Gaps = 6/342 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  +G+  +A    N +   G  P  I+YTT++  L R +R++    L+ ++ +   
Sbjct: 327 INTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNC 386

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + FN  I    + G +++A  + ++M + GC+    TYN L+ G+   G+ + +L+
Sbjct: 387 PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE 446

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M      KPN  TY  L+   C+   ++ A  ++ +M+     P+ VT+N L   +
Sbjct: 447 LFYSMP----CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 502

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G    A +++ +M  +   PN  T   ++ G  K+ N E+A+  L+ +    V P++
Sbjct: 503 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDI 562

Query: 241 VVFNSLIKGFLDIKDS-DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           V ++S+I G L  +D  +   K   ++++ G++P  V ++ I+ A           + F 
Sbjct: 563 VTYSSII-GVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFA 621

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
            MV  G  P+   +  L +G       ++   +L  +   GV
Sbjct: 622 YMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 141/305 (46%), Gaps = 9/305 (2%)

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           N  +R   +++ + EA  +V +  + G  PD      L R   + G T  A ++L   + 
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
           +    +      +V+GYC+ G ++ A R +  M    V P+   +  +I+G     D   
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLC---DRGR 160

Query: 259 VDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
           V +AL+L+++    G +P VVT++ +++A   +   G+  E+ D+M   G  P+I  +++
Sbjct: 161 VGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNV 220

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           +  G  R G    A   L  +  YG  P+ V +TTV+ G C A + +    ++ +M E  
Sbjct: 221 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 280

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
             PN  T++ L+  +       RA ++L+ M   G     +   +V ++    G   +A 
Sbjct: 281 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAF 340

Query: 436 RVLKS 440
           + L +
Sbjct: 341 QFLNN 345


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 217/415 (52%), Gaps = 6/415 (1%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           H A  +F  + + G + +L +   L++AL +      +  +  ++ K  ++P+   FN  
Sbjct: 147 HSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIF 206

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQ 127
           IN   ++G +++A  + + +K  G  P   TYNTLI G+   G+ GK   +  +L+ M  
Sbjct: 207 INGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLA 266

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +K + PN+ T+N L+  +C   ++  A N   +M   G++P+ VTYN+L    +  G+  
Sbjct: 267 NK-ICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLD 325

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +  +M    ++PN  T   +++G+CK+  +++A +    + E ++ PN + FN++I
Sbjct: 326 EAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMI 385

Query: 248 KGFLDIKD-SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
             F       +G     ++++E G+ P+V T++ ++        +   +++ ++M    +
Sbjct: 386 DAFCKAGMMEEGFALHNSMLDE-GIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYEL 444

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           + D+  ++IL  G+ + GEP KAE +L  M   GV PN V + T++ G+C    ++ A+ 
Sbjct: 445 KADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALK 504

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           +  +M + G   N+ TY  L+ G+ +  +   A  LL  M EKG+ P ++T  +V
Sbjct: 505 VRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 209/443 (47%), Gaps = 8/443 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRP---TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           K + H    +F+ L+  G RP    LIT   LV A        S   +  +V+  G K  
Sbjct: 106 KNEKHTVSSVFHSLLLGGDRPCANALIT-DMLVLAYVTNLEIHSACEVFRRVQDYGFKLS 164

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
               N +++A  +     E   ++++M     +P  +T+N  I G    GK  ++  +++
Sbjct: 165 LNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIE 224

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWN---VVYKMVASGIQPDAVTYNTLARAY 180
            + +     PN  TYN L+   C K S  + +    ++ +M+A+ I P+ +T+NTL   +
Sbjct: 225 DI-KAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGF 283

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A+    EMQ   ++PN  T   +++G    G +++A+    +M  L + PN+
Sbjct: 284 CKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNI 343

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V FN+LI GF   K      K    + E  + P+ +TF+T++DA+  AG+M +   + + 
Sbjct: 344 VTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNS 403

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  GI P++  ++ L  G  R    + A+ +L  M  Y +  +VV +  +I GWC   +
Sbjct: 404 MLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGE 463

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
             +A  +  +M  +G+ PN  TY TL+ GY        A ++   ME++G R    T  +
Sbjct: 464 PSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNV 523

Query: 421 VADSWRAIGLAREAKRVLKSAEE 443
           +   +   G   +A R+L    E
Sbjct: 524 LIKGFCKTGKLEDANRLLNEMLE 546



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 191/392 (48%), Gaps = 10/392 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ LV   +  E  Y++  +I+   +P L T+   +  L +  +      +I  ++  G 
Sbjct: 172 LSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGF 231

Query: 61  KPDSILFNAMINA-CSE--SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG---NVGK 114
            P+ + +N +I+  C +  +G +  A  I ++M  +   P   T+NTLI G+    NV  
Sbjct: 232 SPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLA 291

Query: 115 PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYN 174
            + + + +Q     + +KPN  TYN L+    +   ++EA  +  KMV  G++P+ VT+N
Sbjct: 292 AKNAFEEMQ----RQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFN 347

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
            L   + +      A ++  ++    + PN  T   ++  +CK G ME+       M + 
Sbjct: 348 ALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDE 407

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            + PN+  +N LI G    ++     K L  ME + +K DVVT++ ++  W   G   K 
Sbjct: 408 GIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKA 467

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
           +++  +M+  G++P+   ++ L  GY   G  + A  + T M K G   NVV +  +I G
Sbjct: 468 EKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKG 527

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           +C   K++ A  +  +M E G+NPN  TY+ +
Sbjct: 528 FCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 224/439 (51%), Gaps = 27/439 (6%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKD---------------GMKP--DSILFNAMI 71
           L T   ++  L   K++  + S + K+ K+               G +P  ++++ + ++
Sbjct: 78  LETTGKVLHLLANSKKYSKVRSFLDKLVKNEKHTVSSVFHSLLLGGDRPCANALITDMLV 137

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
            A   +  +  A ++F++++D G K + ++ N L+       +  E   + + M + + +
Sbjct: 138 LAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIK-RRI 196

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ---YGETYR 188
           +PN  T+NI +   C    + +A +V+  + A G  P+ VTYNTL   + +    G+ YR
Sbjct: 197 QPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYR 256

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A+ +L EM  N++ PNE T   ++ G+CK+ N+  A      M+   + PN+V +NSLI 
Sbjct: 257 ADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLIN 316

Query: 249 GFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           G   + ++  +D+A+ L   M   G+KP++VTF+ +++ +    ++ + +++FDD+ +  
Sbjct: 317 G---LSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQD 373

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + P+   F+ +   + +AG  ++  ++  SM   G+ PNV  +  +I+G C    ++ A 
Sbjct: 374 LVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAK 433

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            +  +M    +  ++ TY  L+ G+ +  +P +AE+LL  M   GV+P   T   + D +
Sbjct: 434 KLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGY 493

Query: 426 RAIGLAREAKRVLKSAEED 444
              G  + A +V    E++
Sbjct: 494 CMEGNLKAALKVRTQMEKE 512



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 122/269 (45%), Gaps = 36/269 (13%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  EA  +++ ++  G +P ++T+  L+    ++K  K    L   + +  +
Sbjct: 315 INGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDL 374

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNV----- 112
            P++I FN MI+A  ++G ++E   +   M D G  P  STYN LI G     NV     
Sbjct: 375 VPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKK 434

Query: 113 ---------------------------GKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
                                      G+P ++ KLL  M  +  VKPN  TYN L+  +
Sbjct: 435 LLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEM-LNVGVKPNHVTYNTLMDGY 493

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C + +++ A  V  +M   G + + VTYN L + + + G+   A ++L EM    + PN 
Sbjct: 494 CMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNR 553

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
            T  ++     ++G + D    LY +  +
Sbjct: 554 TTYDVVRLEMLEKGFIPDIEGHLYNISSM 582


>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Glycine max]
          Length = 932

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 203/413 (49%), Gaps = 42/413 (10%)

Query: 50  SLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY 109
           +L+ ++E+ G+     +++ M++  +  GN ++ + +F ++K+ G  P+  +Y  LI  Y
Sbjct: 410 ALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLY 469

Query: 110 GNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
             VGK  ++L++ ++M     +K N +TY++L+  +        A++V       G++PD
Sbjct: 470 TKVGKVSKALEISKMMKMS-GIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPD 528

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
            V YN +  A+   G   RA  M+ +MQ  + RP  RT   I+ G+ + G M  A+    
Sbjct: 529 VVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFD 588

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWS 286
            M+     P +  +N+LI G ++ +    + KA+ +++E    GV P+  T++T+M  ++
Sbjct: 589 MMRRSGCIPTVHTYNALILGLVEKRQ---MTKAVAILDEMNVAGVGPNEHTYTTLMQGYA 645

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIH----------------------------------- 311
           S G   K  + F  +   G+E D++                                   
Sbjct: 646 SLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTF 705

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
           V++IL  G+ R G+  +A  ++  MRK G+ P++  +T+ I+  C A  MQ+A  I ++M
Sbjct: 706 VYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEM 765

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
              GI PNLKTY TL+ G+  A  P +A    + M+  G +P K+    +  S
Sbjct: 766 EASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVYHCLVTS 818



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 178/353 (50%), Gaps = 1/353 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+    GK  +A  I   +   G +  + TY+ L+    + K + +  S+     KDG+
Sbjct: 466 INLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGL 525

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD +L+N +I A    GN+D A+ + ++M+    +PTT T+  +I G+   G+   +L+
Sbjct: 526 KPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALE 585

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +  +M +   + P   TYN L+     K  + +A  ++ +M  +G+ P+  TY TL + Y
Sbjct: 586 IFDMMRRSGCI-PTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGY 644

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A  G+T +A Q    ++N  +  +  T   ++   CK G M+ A+     M    +  N 
Sbjct: 645 ASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNT 704

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            V+N LI G+    D       +  M + G+ PD+ T+++ ++A   AG M K  EI  +
Sbjct: 705 FVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQE 764

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
           M  +GI+P++  ++ L  G+ RA  P+KA S    M+  G  P+  ++  +++
Sbjct: 765 MEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVYHCLVT 817



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 183/389 (47%), Gaps = 7/389 (1%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P    Y  +V    R+            +   G++P S +++++I+A +   +++EA+ 
Sbjct: 281 KPARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALH 340

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
             +KMK+ G + T  TY+ ++ G+  +G  + +    +  +++K    N   Y  ++ A 
Sbjct: 341 CVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFE-EAKEKLPSLNAVIYGGIIYAH 399

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C   +++ A  +V +M   GI      Y+T+   Y   G   +   +   ++     P+ 
Sbjct: 400 CQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSV 459

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            + G +++ Y K G +  A+     MK   +  N+  ++ LI GFL +KD      A ++
Sbjct: 460 ISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKD---WANAFSV 516

Query: 266 MEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
            E+F   G+KPDVV ++ I+ A+   G M +   +   M K    P    F  +  G+ R
Sbjct: 517 FEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFAR 576

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           AGE ++A  I   MR+ G  P V  +  +I G     +M +A++I ++M   G+ PN  T
Sbjct: 577 AGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHT 636

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           Y TL+ GY       +A +   V+  +G+
Sbjct: 637 YTTLMQGYASLGDTEKAFQYFTVLRNEGL 665



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 93/431 (21%), Positives = 197/431 (45%), Gaps = 1/431 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA +    + EEG   T++TY+ +V    +     +      + ++     +++++  +I
Sbjct: 337 EALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGII 396

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
            A  +  N+D A  + ++M++ G       Y+T++ GY  +G  E+ L +   + ++   
Sbjct: 397 YAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRL-KECGF 455

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  +Y  L+  +     + +A  +   M  SGI+ +  TY+ L   + +  +   A  
Sbjct: 456 FPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFS 515

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  +   + ++P+      I++ +C  GNM+ A+  + +M++    P    F  +I GF 
Sbjct: 516 VFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFA 575

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
              +     +   +M   G  P V T++ ++        M K   I D+M  AG+ P+ H
Sbjct: 576 RAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEH 635

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++ L +GY   G+ +KA    T +R  G+  +V  +  ++   C + +MQ A+++ ++M
Sbjct: 636 TYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEM 695

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
               I  N   Y  L+ G+      W A +L+Q M ++G+ P   T     ++    G  
Sbjct: 696 SAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDM 755

Query: 432 REAKRVLKSAE 442
           ++A  +++  E
Sbjct: 756 QKATEIIQEME 766



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 161/331 (48%), Gaps = 5/331 (1%)

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F+++K    KP    Y  ++K YG  G    + +  + M + + ++P+   Y+ L+ A+ 
Sbjct: 276 FERIK----KPARKEYGLMVKYYGRRGDMHHARQTFESM-RARGIEPSSHVYSSLIHAYA 330

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               +EEA + V KM   GI+   VTY+ +   +A+ G    A+    E +      N  
Sbjct: 331 VGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAV 390

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
             G I+  +C+  NM+ A   +  M+E  +   + ++++++ G+  I + +        +
Sbjct: 391 IYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRL 450

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           +E G  P V+++  +++ ++  G + K  EI   M  +GI+ ++  +S+L  G+++  + 
Sbjct: 451 KECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDW 510

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             A S+     K G+ P+VV++  +I+ +C    M RA+ +  +M +    P  +T+  +
Sbjct: 511 ANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPI 570

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           + G+  A +  RA E+  +M   G  P   T
Sbjct: 571 IHGFARAGEMRRALEIFDMMRRSGCIPTVHT 601



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 137/307 (44%)

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KP  + Y ++V+ +  +  +  A      M A GI+P +  Y++L  AYA   +   A  
Sbjct: 281 KPARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALH 340

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
            + +M+   +     T  IIV G+ K GN + A  +    KE     N V++  +I    
Sbjct: 341 CVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHC 400

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
            I + D  +  +  MEE G+   +  + T+MD ++  G   KC  +FD + + G  P + 
Sbjct: 401 QICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVI 460

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            +  L   Y + G+  KA  I   M+  G+  N+  ++ +I+G+        A S++E  
Sbjct: 461 SYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDF 520

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
            + G+ P++  Y  ++  +       RA  +++ M+++  RP   T   +   +   G  
Sbjct: 521 TKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEM 580

Query: 432 REAKRVL 438
           R A  + 
Sbjct: 581 RRALEIF 587



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 123/244 (50%), Gaps = 1/244 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+   A  IF+ +   G  PT+ TY  L+  L  +++    ++++ ++   G+ P+   +
Sbjct: 578 GEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTY 637

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             ++   +  G+ ++A + F  +++ G +    TY  L+K     G+ + +L + + MS 
Sbjct: 638 TTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSA 697

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            KN+  N   YNIL+  W  +  + EA +++ +M   G+ PD  TY +   A  + G+  
Sbjct: 698 -KNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQ 756

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A +++ EM+ + ++PN +T   +++G+ +    E A+     MK     P+  V++ L+
Sbjct: 757 KATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVYHCLV 816

Query: 248 KGFL 251
              L
Sbjct: 817 TSLL 820



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 118/261 (45%)

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           E W  V        +P    Y  + + Y + G+ + A Q    M+   + P+      ++
Sbjct: 267 ENWQAVVTAFERIKKPARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLI 326

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
             Y    +ME+A+  + +MKE  +   +V ++ ++ GF  + ++D  D      +E    
Sbjct: 327 HAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPS 386

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            + V +  I+ A      M + + +  +M + GI+  I ++  +  GY   G  +K   +
Sbjct: 387 LNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIV 446

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              +++ G  P+V+ +  +I+ +    K+ +A+ I + M   GI  N+KTY  L+ G+ +
Sbjct: 447 FDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLK 506

Query: 393 AKQPWRAEELLQVMEEKGVRP 413
            K    A  + +   + G++P
Sbjct: 507 LKDWANAFSVFEDFTKDGLKP 527


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 129/498 (25%), Positives = 240/498 (48%), Gaps = 26/498 (5%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK       F  +I  G +PT+ TY  ++  + ++   ++   L  +++  G+ PD++ +
Sbjct: 112 GKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTY 171

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N+MI+   + G +D+ +  F++MK   C+P   TYNTLI  +   GK  + L+  + M Q
Sbjct: 172 NSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQ 231

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              +KPN  +Y+ LV A+C ++ +++A      M   G+ P+  TY +L  AY + G   
Sbjct: 232 -SGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLS 290

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++  EM    V  N  T   ++ G C    +++A     +M    V PNL  + +LI
Sbjct: 291 DAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALI 350

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGL--MGKCQEIFDDMV 302
            GF+  K+   +D+AL L++E    G+KPD++ + T +  WS  GL  +   + + ++M 
Sbjct: 351 HGFVKAKN---MDRALELLDEMKGRGIKPDLLLYGTFI--WSLCGLEKIEAAKVVMNEMQ 405

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           + GI+ +  +++ L   Y ++  P +   +L  M +  +    V F  +I G C    + 
Sbjct: 406 EKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVS 465

Query: 363 RAMSIYEKMC-EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           +A+  + ++  + G+  N   Y  ++ G  +  Q   A  L + M +KG+ P ++    +
Sbjct: 466 KAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSL 525

Query: 422 ADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF-LQIPGVV 480
            D     G  ++   V   A  D+ +      EI VES  R  +L  +     L++   V
Sbjct: 526 ID-----GKLKQGNVVQALALRDKMA------EIGVESGARFGDLCQNTIKLSLRMGARV 574

Query: 481 SSEHN--GSSAAKIRSQI 496
             +H   GS+ + I S +
Sbjct: 575 GVQHYNLGSADSYISSSL 592



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 185/370 (50%), Gaps = 1/370 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P    +  L + L  +  F+  L   SK+++  + P +   N +++  +  G  D   + 
Sbjct: 61  PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F+ M  +G KPT  TYN +I      G  E +  L + M + + + P+  TYN ++  + 
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEM-KFRGLIPDTVTYNSMIDGYG 179

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               +++      +M +   +PD +TYNTL   + ++G+  +  +   EM+ + ++PN  
Sbjct: 180 KVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVV 239

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           +   +V  +CKE  M+ A++F   M+ L + PN   + SL+  +  I +     +    M
Sbjct: 240 SYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEM 299

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            + GV+ +VVT++ ++D       + + +E+F  MV AG+ P++  ++ L  G+V+A   
Sbjct: 300 SQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNM 359

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +A  +L  M+  G+ P+++++ T I   C   K++ A  +  +M E GI  N   Y TL
Sbjct: 360 DRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTL 419

Query: 387 LWGYGEAKQP 396
           +  Y +++ P
Sbjct: 420 MDAYFKSENP 429



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/412 (23%), Positives = 196/412 (47%), Gaps = 2/412 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ +  +G    A  +F  +   G  P  +TY +++    +  R    +    +++    
Sbjct: 140 IDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSC 199

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD I +N +IN   + G + + ++ F++MK SG KP   +Y+TL+  +      +++LK
Sbjct: 200 EPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALK 259

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M +   + PN+ TY  LV A+C   ++ +A+ +  +M   G++ + VTY  L    
Sbjct: 260 FYVDMRR-LGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGL 318

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                   AE++  +M    V PN  +   ++ G+ K  NM+ A+  L  MK   + P+L
Sbjct: 319 CDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDL 378

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +++ + I     ++  +     +  M+E G+K +   ++T+MDA+  +    +   + ++
Sbjct: 379 LLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEE 438

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM-RKYGVHPNVVMFTTVISGWCNAV 359
           M++  IE     F +L  G  +     KA      +   +G+  N  ++T +I G C   
Sbjct: 439 MLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKED 498

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           +++ A +++E+M + G+ P+   Y +L+ G  +     +A  L   M E GV
Sbjct: 499 QVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGV 550



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 4/242 (1%)

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A Q   +M+  +V P  R+C  ++  + + G  +   RF   M      P +  +N +I 
Sbjct: 82  ALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMID 141

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
                 D +        M+  G+ PD VT+++++D +   G +      F++M     EP
Sbjct: 142 CMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEP 201

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D+  ++ L   + + G+  K       M++ G+ PNVV ++T++  +C    MQ+A+  Y
Sbjct: 202 DVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFY 261

Query: 369 EKMCEIGINPNLKTYETLLWGY---GEAKQPWR-AEELLQVMEEKGVRPKKSTIQLVADS 424
             M  +G+ PN  TY +L+  Y   G     +R A+E+ QV  E  V    + I  + D 
Sbjct: 262 VDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDV 321

Query: 425 WR 426
            R
Sbjct: 322 ER 323



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 103/221 (46%)

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           +E   E+A++   +MK   V P     N L+  F  +  +DG+ +    M   G KP V 
Sbjct: 75  EEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVF 134

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T++ ++D     G +     +F++M   G+ PD   ++ +  GY + G           M
Sbjct: 135 TYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEM 194

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
           +     P+V+ + T+I+ +C   K+ + +  + +M + G+ PN+ +Y TL+  + +    
Sbjct: 195 KSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMM 254

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
            +A +    M   G+ P + T   + D++  IG   +A R+
Sbjct: 255 QQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRL 295



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 77/168 (45%), Gaps = 2/168 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G  K   A  + N + E+G +     YTTL+ A  + +     L L+ ++ +  ++  
Sbjct: 388 LCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVT 447

Query: 64  SILFNAMINACSESGNVDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           ++ F  +I+   ++  V +A+  F ++  D G +   + Y  +I G     + E +  L 
Sbjct: 448 AVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLF 507

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
           + M+Q K + P+   Y  L+     + ++ +A  +  KM   G++  A
Sbjct: 508 EQMAQ-KGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVESGA 554


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 190/401 (47%), Gaps = 36/401 (8%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G+G+   A  + + ++     P ++TYT L+ A  ++  +K  + L+ ++   G  PD
Sbjct: 42  LCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPD 101

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N ++N   + G VD+A++  + +   GC+P T +YN ++KG     + E++ +L+ 
Sbjct: 102 IVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMG 161

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M Q K   PN  T+N+L+   C K  +E A  V+ ++   G  P++++YN L  A    
Sbjct: 162 EMGQ-KGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHA---- 216

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                                          +CK+  M+ AM FL  M     +P++V +
Sbjct: 217 -------------------------------FCKQKKMDKAMAFLDLMVSRGCYPDIVSY 245

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+L+       + D   + L  +++ G  P +++++T++D  + AG   +  E+ ++MV 
Sbjct: 246 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 305

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G++PDI  +S +A G  R    + A      ++  G+ PN V++  +I G C   +   
Sbjct: 306 KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS 365

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
           A+ ++  M   G  PN  TY  L+ G         A +LL 
Sbjct: 366 AIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLD 406



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 98/409 (23%), Positives = 200/409 (48%), Gaps = 4/409 (0%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           + Y  +VA      +  +   L++++    ++PD+  +N +I      G    A+ +  +
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M    C P   TY  L++        ++++KLL  M +DK   P+  TYN++V   C + 
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM-RDKGCTPDIVTYNVVVNGICQEG 116

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            +++A   +  + + G +P+ V+YN + +          AE+++ EM      PN  T  
Sbjct: 117 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 176

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
           +++S  C++G +E A+  L ++ +    PN + +N L+  F   K  D     L LM   
Sbjct: 177 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 236

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G  PD+V+++T++ A   +G +    E+   +   G  P +  ++ +  G  +AG+ ++A
Sbjct: 237 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 296

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             +L  M   G+ P+++ ++T+ +G C   +++ A+  + K+ ++GI PN   Y  ++ G
Sbjct: 297 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 356

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             + ++   A +L   M   G  P +ST  ++ +     GL +EA+ +L
Sbjct: 357 LCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLL 405



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 3/199 (1%)

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +N+++ G+     +  +D A  L+ E  V+PD  T++T++      G       + D+
Sbjct: 1   MAYNAMVAGYCG---AGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M++    PD+  ++IL +   +    ++A  +L  MR  G  P++V +  V++G C   +
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A+   + +   G  PN  +Y  +L G   A++   AEEL+  M +KG  P   T  +
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 421 VADSWRAIGLAREAKRVLK 439
           +       GL   A  VL+
Sbjct: 178 LISFLCRKGLVEPALEVLE 196


>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
 gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
 gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
          Length = 583

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 189/425 (44%), Gaps = 3/425 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKD-GMKPDSILFNAMINACSESGNVDEAMK 85
           P+  +   ++  L R  R    L L  ++    G  PD+   + ++++C+ +  +D +  
Sbjct: 142 PSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASAT 201

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +  K  + GC+     YN L+      G+  + + L +   QD+   P+  ++N++++  
Sbjct: 202 LLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGV 261

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV-RPN 204
           C    +++A  +V +M   G  PD VT+N L     +  E  R  ++L  +Q + V  PN
Sbjct: 262 CRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPN 321

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   ++SGYCK G +EDAM     M    + PN V +N LI G+  + D     +   
Sbjct: 322 VVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQ 381

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M      PDVVTFS+++D +   G +     I+ DM +  I+P+++ FSI+     +  
Sbjct: 382 QMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQN 441

Query: 325 EPQKAESILTSMR-KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
              +A  +L  +  +  + P   ++  VI   C   K+  A  I + M E G  P+  TY
Sbjct: 442 RSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTY 501

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             L+ GY    +   A      M E G  P   T+          G+  E   V++ A  
Sbjct: 502 TILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVMRLASG 561

Query: 444 DRQSM 448
              S+
Sbjct: 562 GASSI 566



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 160/337 (47%), Gaps = 8/337 (2%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM-KPDSILFNAMINACSESGNV 80
           E G R     Y  L+++L  + R   +++L  +  +D +  PD   FN +I      G V
Sbjct: 208 EFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQV 267

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
            +A+++ ++M + GC P T T+N L+ G     +     ++L+ + +D    PN  T+  
Sbjct: 268 QKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTS 327

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           ++  +C    +E+A  V   MVASGI P+ VTYN L   Y + G+   A ++  +M   +
Sbjct: 328 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 387

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
             P+  T   ++ GYC+ G ++DA+R    M +  + PN+  F+ +I        S   D
Sbjct: 388 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRS---D 444

Query: 261 KALTLMEEFGVKPDVV----TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           +A+ L+ E  ++PD+      ++ ++D     G + +   I   M + G  PD + ++IL
Sbjct: 445 EAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTIL 504

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
             GY       +A      M + G  P+ +     IS
Sbjct: 505 IIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFIS 541



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 113/283 (39%), Gaps = 38/283 (13%)

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRM-KELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           + P+  +C  I+   C+ G   DA++   +M       P+    + L+         D  
Sbjct: 140 ITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDAS 199

Query: 260 DKALTLMEEFGVK------------------------------------PDVVTFSTIMD 283
              L+   EFG +                                    PDV +F+ ++ 
Sbjct: 200 ATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIK 259

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV-H 342
                G + K  E+ + M + G  PD    +IL  G  R  E  +   +L  +++ GV  
Sbjct: 260 GVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCM 319

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           PNVV FT+VISG+C A K++ AM++Y  M   GI PN  TY  L+ GYG+      A E+
Sbjct: 320 PNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEV 379

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
            Q M      P   T   + D +   G   +A R+     + R
Sbjct: 380 YQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHR 422



 Score = 43.9 bits (102), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 3/89 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L   GK  EA+ I   + E+G RP   TYT L+     + R    +    ++ + G 
Sbjct: 470 IDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGC 529

Query: 61  KPDSILFNAMINACSESG---NVDEAMKI 86
            PDSI  N  I+   ++G    VD  M++
Sbjct: 530 SPDSITVNCFISCLLKAGMPNEVDHVMRL 558


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 119/499 (23%), Positives = 223/499 (44%), Gaps = 72/499 (14%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK-------------- 57
           +A  +F  ++     P++ +++ L+ A+   K + S++SL  ++ K              
Sbjct: 55  DAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIVV 114

Query: 58  ---------------------DGMKPDSILFNAMINACSESGNVDEAMKIFQKM-KDSGC 95
                                 G+  + + F  +I        V +A+ +F+K+ +++ C
Sbjct: 115 NSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENIC 174

Query: 96  KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
           +P    Y T++ G    G  +++  LL+LM Q  + KPN RTY I++ A+C    ++ A 
Sbjct: 175 EPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQG-STKPNTRTYTIVIDAFCKDGMLDGAT 233

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
           +++ +M    I PD  TY+TL  A  +  +      +  EM +  + PN  T   ++ G 
Sbjct: 234 SLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGL 293

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF---------LDIKDS---------- 256
           CKEG +EDA   +  M E  V P+++ +N +I G+          +I DS          
Sbjct: 294 CKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDI 353

Query: 257 -------------DGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
                          +D+A+ +  E    G+KP +VT + ++      G     Q  FD+
Sbjct: 354 ISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDE 413

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+ AG  PD++    L  GY + G  ++A S    + +     N+ ++T VI G C   K
Sbjct: 414 MLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGK 473

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           + +A + +EK+  IG++P++ TY  ++ GY +      A+++L+ ME+ G      T  +
Sbjct: 474 LDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNV 533

Query: 421 VADSWRAIGLAREAKRVLK 439
           +   +       E K  L+
Sbjct: 534 IVRGFLRSNKVSEMKAFLE 552



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 97/421 (23%), Positives = 205/421 (48%), Gaps = 2/421 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEG-HRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           L  + K  +A ++F  L+ E    P  + Y T++  L ++   +    L+  +E+   KP
Sbjct: 152 LFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKP 211

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           ++  +  +I+A  + G +D A  +  +MK     P   TY+TLI     + +  E+++ L
Sbjct: 212 NTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQ-WENVRTL 270

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
            L     N+ PN  T+N ++   C +  +E+A  ++  M+  G+ PD +TYN +   Y  
Sbjct: 271 FLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGL 330

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+  RA ++   M N  + P+  +  I+++GY ++  +++AM+    + +  + P++V 
Sbjct: 331 RGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVT 390

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
            N L+ G  ++  +         M   G  PD+ T  T++  +   GL+ +    F  + 
Sbjct: 391 CNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLE 450

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           +   + +I +++ +  G  + G+  KA +    +   G+HP+V+ +T +ISG+C    + 
Sbjct: 451 RRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLD 510

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A  +  KM + G   + +TY  ++ G+  + +    +  L+ +  K    + +T++L+ 
Sbjct: 511 EAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLM 570

Query: 423 D 423
           D
Sbjct: 571 D 571



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/433 (21%), Positives = 195/433 (45%), Gaps = 35/433 (8%)

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ---------------- 123
           +D+A  +F++M  +   P+ ++++ L+K   ++      + L +                
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 124 ------LMSQ------------DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
                 LM +             K +  N+ T+  L+R   ++N +++A ++  K+V   
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 166 I-QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           I +P+ V Y T+     + G T +A  +L  M+    +PN RT  I++  +CK+G ++ A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGA 232

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
              L  MK+  + P++  +++LI     +   + V      M    + P+V TF++++D 
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
               G +   +EI   M++ G++PD+  ++++  GY   G+  +A  I  SM    + P+
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPD 352

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
           ++ +  +I+G+    K+  AM +  ++ + G+ P++ T   LL G  E  +   A+    
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFD 412

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQ 464
            M   G  P   T   +   +   GL  EA       E  R+    +     ++ + +  
Sbjct: 413 EMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNG 472

Query: 465 NLSASNSTFLQIP 477
            L  +++TF ++P
Sbjct: 473 KLDKAHATFEKLP 485



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/368 (22%), Positives = 167/368 (45%), Gaps = 36/368 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L  KG   +A  +   + +   +P   TYT ++ A  +        SL++++++  +
Sbjct: 185 MNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSI 244

Query: 61  KPDSI-----------------------------------LFNAMINACSESGNVDEAMK 85
            PD                                      FN++I+   + G V++A +
Sbjct: 245 PPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEE 304

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           I + M + G  P   TYN +I GYG  G+ + + ++   M  +K+++P+  +YNIL+  +
Sbjct: 305 IMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMI-NKSIEPDIISYNILINGY 363

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
             +  I+EA  V  ++   G++P  VT N L     + G T  A+    EM +    P+ 
Sbjct: 364 ARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDL 423

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   ++ GY K G +E+AM   ++++      N+ ++ ++I G       D        
Sbjct: 424 YTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEK 483

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           +   G+ PDV+T++ ++  +   GL+ + +++   M   G   D   ++++ +G++R+ +
Sbjct: 484 LPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNK 543

Query: 326 PQKAESIL 333
             + ++ L
Sbjct: 544 VSEMKAFL 551



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 1/175 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+   A   F+ ++  GH P L T+ TL+    +    +  +S   K+E+     +  ++
Sbjct: 402 GRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIY 461

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            A+I+   ++G +D+A   F+K+   G  P   TY  +I GY   G  +E+  +L+ M +
Sbjct: 462 TAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKM-E 520

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           D     ++RTYN++VR +   N + E    + ++       +A T   L    A+
Sbjct: 521 DNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAE 575



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/312 (18%), Positives = 116/312 (37%), Gaps = 78/312 (25%)

Query: 207 TCGIIVSGYCKEGN-------MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           TC I V G     N       ++DA     +M   +  P++  F+ L+K  + +K    V
Sbjct: 32  TCSISVKGNFGVSNEFQNVKCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSV 91

Query: 260 -------DKALTLMEEF----------------------------GVKPDVVTFSTIMDA 284
                   K    + EF                            G+  + VTF+T++  
Sbjct: 92  VSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRG 151

Query: 285 WSSAGLMGKCQEIFDDMVKAGI------------------------------------EP 308
             +   +     +F  +V+  I                                    +P
Sbjct: 152 LFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKP 211

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           +   ++I+   + + G    A S+L  M++  + P++  ++T+I   C   + +   +++
Sbjct: 212 NTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLF 271

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            +M  + I PN+ T+ +++ G  +  +   AEE+++ M EKGV P   T  ++ D +   
Sbjct: 272 LEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLR 331

Query: 429 GLAREAKRVLKS 440
           G    A+ +  S
Sbjct: 332 GQVDRAREIFDS 343


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 184/356 (51%), Gaps = 4/356 (1%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           F  +++ G  P  +TYT LV +L +  +++    +  ++   G  P+ + +  ++N   +
Sbjct: 145 FERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCK 204

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
           +G +D+A+ + +++K +G  P+ S Y+TLI G     + +E+ +L ++ + D     +  
Sbjct: 205 AGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAAGDVQ---DVI 261

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
            Y   +   C    ++EA  V  KM+ +G  PD V+YN +  +  +      A++++ + 
Sbjct: 262 VYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQA 321

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL-EVHPNLVVFNSLIKGFLDIKD 255
              +  P    C ++V G CK   +E+A   L RM E  +  P++V ++++I G      
Sbjct: 322 MERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADR 381

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D     L  M   G  PDVVT++ I+DA+   G + + +E+F  M + G   D+  ++I
Sbjct: 382 LDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNI 441

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
           L +GY RA +  +A +++  M   G+ PNVV  +T++ G C   +++ A  + EKM
Sbjct: 442 LIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 198/436 (45%), Gaps = 9/436 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + + V  G   EA+ +F   +    RP   TY TL+    + ++    ++L+ +++  G+
Sbjct: 24  LEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGI 83

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + F ++I    E    D+A++IF +M D   KP    Y  +I     + K + +  
Sbjct: 84  TPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAAS 143

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             + M Q     P+  TY +LV +       E+   +  +M++ G  P+ VTY T+   Y
Sbjct: 144 YFERMVQ-SGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGY 202

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G   +A  ++  ++     P+      ++ G CK    ++A R L+ M   +V  ++
Sbjct: 203 CKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEA-RELFEMAAGDVQ-DV 260

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +V+ S I G       D        M E G  PD V+++ I+ +      + + +E+ D 
Sbjct: 261 IVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQ 320

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH-PNVVMFTTVISGWCNAV 359
            ++    P + V ++L  G  ++   ++A  IL  M + G   P+VV ++ VI G C A 
Sbjct: 321 AMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKAD 380

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           ++  A  + +KM   G  P++ TY  ++  + +  +   A EL Q M E+G       + 
Sbjct: 381 RLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERG-----CALD 435

Query: 420 LVADSWRAIGLAREAK 435
           +VA +    G  R AK
Sbjct: 436 VVAYNILIRGYCRAAK 451



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/423 (22%), Positives = 186/423 (43%), Gaps = 39/423 (9%)

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           + G + ++   N+++      G   EA ++F+    +  +P   TY TLI+G+    +  
Sbjct: 10  RPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIP 69

Query: 117 ESLKL--------------------------------LQLMSQ--DKNVKPNDRTYNILV 142
           +++ L                                LQ+  Q  D  VKP+   Y +++
Sbjct: 70  QAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVI 129

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
              C  N ++ A +   +MV SG  PD VTY  L  +  +  +  +  Q+  EM +    
Sbjct: 130 GHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHS 189

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P   T   +V+GYCK G ++ A+  + R+K     P+  ++++LI G       D  D+A
Sbjct: 190 PELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLC---KHDRHDEA 246

Query: 263 LTLME-EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
             L E   G   DV+ +++ +     AG + + + +   M++AG  PD   ++++     
Sbjct: 247 RELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLC 306

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN-PNL 380
           +     +A+ ++    +    P V + T ++ G C + +++ A  I E+M E G   P++
Sbjct: 307 KDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSV 366

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            TY  ++ G  +A +   A  +LQ M   G  P   T   + D++  +G   EA+ + + 
Sbjct: 367 VTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQR 426

Query: 441 AEE 443
             E
Sbjct: 427 MHE 429



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 170/371 (45%), Gaps = 10/371 (2%)

Query: 84  MKIFQKMK-DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV---KPNDRTYN 139
           M  FQ  K   G +  T T N+L++ + N G   E+ ++ +    D+ V   +P+D TY 
Sbjct: 1   MLFFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFK----DELVTLFRPDDFTYG 56

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+R +C    I +A N++ +M A+GI P  VT+ +L R   +   T +A Q+  +M + 
Sbjct: 57  TLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDM 116

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           +V+P+     +++   CK   ++ A  +  RM +    P+ V +  L+         +  
Sbjct: 117 KVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQG 176

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            +    M   G  P++VT++T+++ +  AG + +   +   +   G  P   ++S L  G
Sbjct: 177 HQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDG 236

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             +     +A  +       G   +V+++T+ ISG C A K+  A +++ KM E G  P+
Sbjct: 237 LCKHDRHDEARELFEM--AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPD 294

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             +Y  +++   +  +   A+EL+    E+   P      ++ D         EA  +L+
Sbjct: 295 PVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILE 354

Query: 440 SAEEDRQSMPN 450
              E     P+
Sbjct: 355 RMLETGDRAPS 365



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/333 (22%), Positives = 139/333 (41%), Gaps = 73/333 (21%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP--------- 62
           + H IF  ++ +GH P L+TY T+V    +  R    LSL+ +++  G  P         
Sbjct: 175 QGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLI 234

Query: 63  ------------------------DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPT 98
                                   D I++ + I+   ++G +DEA  +  KM ++GC P 
Sbjct: 235 DGLCKHDRHDEARELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPD 294

Query: 99  TSTYNT-----------------------------------LIKGYGNVGKPEESLKLLQ 123
             +YN                                    L+ G     + EE+  +L+
Sbjct: 295 PVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILE 354

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +  +  P+  TY+ ++   C  + +++A+ V+ KM  +G  PD VTY  +  A+ + 
Sbjct: 355 RMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKV 414

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A ++   M       +     I++ GYC+   +++A+  +  M    + PN+V  
Sbjct: 415 GRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSL 474

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEE--FGVKPD 274
           ++++ G    K+S  V++A  LME+  F   PD
Sbjct: 475 STIVDGL--CKESR-VEEARLLMEKMNFESLPD 504


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 187/380 (49%), Gaps = 8/380 (2%)

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKD-SGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +P+++ +N +I      G V  A+ I ++M++  G  P   TY T+I G+  VG+ +E++
Sbjct: 182 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 241

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K+   M     VKP    YN L+  +C +  ++ A     +MV  G+     TYN L  A
Sbjct: 242 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 301

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
               G    A +++ EM    +  +  T  I+++G+CKEGN++ A+     M    V   
Sbjct: 302 LFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 361

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +V + SLI            DK        G++PD+V ++ ++++ S++G + +  EI  
Sbjct: 362 VVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG 421

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M K  I PD   ++ L +G    G   +A  ++  M K G+ P++V + T+ISG+    
Sbjct: 422 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKG 481

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST-I 418
            ++ A+ I  +M   G NP L TY  L+ G  +  Q   AE +++ M E G+ P  ST I
Sbjct: 482 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 541

Query: 419 QLVADSWRAIGLAREAKRVL 438
            L+       GL  E +R +
Sbjct: 542 SLIE------GLTTEDERAI 555



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 184/389 (47%), Gaps = 42/389 (10%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG---- 59
           L   GKP  A      L+ +  RP  +TY T++A    + R ++ L ++ ++ + G    
Sbjct: 164 LCSAGKPARALE----LLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAP 219

Query: 60  ---------------------------------MKPDSILFNAMINACSESGNVDEAMKI 86
                                            +KP+++++NA+I    + G +D A+  
Sbjct: 220 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 279

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M + G   T +TYN L+      G+  E+ +L++ M   K +  +  TYNIL+   C
Sbjct: 280 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG-GKGLALDVFTYNILINGHC 338

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            + ++++A  +   M   G++   VTY +L  A ++ G+    +++  E     +RP+  
Sbjct: 339 KEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLV 398

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               +++ +   GN++ A   +  M++  + P+ V +N+L++G   +   D   K +  M
Sbjct: 399 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 458

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            + G++PD+VT++T++  +S  G +     I ++M+  G  P +  ++ L +G  + G+ 
Sbjct: 459 TKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG 518

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGW 355
             AE+++  M + G+ P+   + ++I G 
Sbjct: 519 DDAENMVKEMVENGITPDDSTYISLIEGL 547



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 147/290 (50%), Gaps = 5/290 (1%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N L+G    +GK   A    + ++E G   T+ TY  LV AL    R      L+ ++  
Sbjct: 261 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 320

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+  D   +N +IN   + GNV +A++IF+ M   G + T  TY +LI      G+ +E
Sbjct: 321 KGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQE 380

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           + KL     + + ++P+   YN L+ +  +  +I+ A+ ++ +M    I PD VTYNTL 
Sbjct: 381 TDKLFDEAVR-RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 439

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
           R     G    A +++ EM    ++P+  T   ++SGY  +G+++DA+R    M     +
Sbjct: 440 RGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 499

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
           P L+ +N+LI+G       D  +  +  M E G+ PD  T+ ++++  ++
Sbjct: 500 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTT 549



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NIL+     +G   +A  IF  +   G R T++TYT+L+ AL+++ + +    L  +  +
Sbjct: 331 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 390

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G++PD +L+NA+IN+ S SGN+D A +I  +M+     P   TYNTL++G   +G+ +E
Sbjct: 391 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 450

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           + KL+  M++ + ++P+  TYN L+  +  K  +++A  +  +M+  G  P  +TYN L 
Sbjct: 451 ARKLIDEMTK-RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 509

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
           +   + G+   AE M+ EM  N + P++ T   ++ G   E
Sbjct: 510 QGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 550



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 136/310 (43%), Gaps = 39/310 (12%)

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           T+NI++R  CS      A  ++ +M     +P+AVTYNT+   +   G    A  ++ EM
Sbjct: 156 TFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREM 211

Query: 197 -QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
            +   + PN+ T G ++SG+CK G +++A++               VF            
Sbjct: 212 RERGGIAPNQYTYGTVISGWCKVGRVDEAVK---------------VF------------ 244

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
               D+ LT  E   VKP+ V ++ ++  +   G +       D MV+ G+   +  +++
Sbjct: 245 ----DEMLTKGE---VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNL 297

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L       G   +A  ++  M   G+  +V  +  +I+G C    +++A+ I+E M   G
Sbjct: 298 LVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRG 357

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           +   + TY +L++   +  Q    ++L      +G+RP       + +S    G    A 
Sbjct: 358 VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 417

Query: 436 RVLKSAEEDR 445
            ++   E+ R
Sbjct: 418 EIMGEMEKKR 427



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 8/113 (7%)

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F DM +  +      F+I+ +    AG+P +A  +L  M +    PN V + TVI+G+C
Sbjct: 141 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFC 196

Query: 357 NAVKMQRAMSIYEKMCEI-GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           +  ++Q A+ I  +M E  GI PN  TY T++ G+ +     R +E ++V +E
Sbjct: 197 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV---GRVDEAVKVFDE 246


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 119/474 (25%), Positives = 221/474 (46%), Gaps = 19/474 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLI---EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           +N+++  G    A   +N ++   +    P ++++  ++ ++ +     + + L  ++  
Sbjct: 150 LNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPV 209

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
               PD+  +  +++   +   +DEA+ +  +M+  GC P+ +T+N LI G    G    
Sbjct: 210 RKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTR 269

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
             KL+  M   K   PN+ TYN L+   C K  +++A +++ +MV+S   P+ VTY T+ 
Sbjct: 270 VTKLVDNMFL-KGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTII 328

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               + G      ++L  M+      NE    ++VSG  KEG  E+AMR      +    
Sbjct: 329 NGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCK 388

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
            N V++++L+ G    +  D   K L+ M + G  P+  TFS++M  +   G   K  E+
Sbjct: 389 LNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEV 448

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           + DM K     +   +S+L  G  + G+  +A  +   M   G  P+VV ++++I G C+
Sbjct: 449 WKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCD 508

Query: 358 AVKMQRAMSIY-EKMC-EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           A  ++ A+ +Y E +C E    P++ TY  L     +     RA +LL  M ++G  P  
Sbjct: 509 AGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDL 568

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSAS 469
            T  +               R+L+   +  Q      DE+ V  + R++NL AS
Sbjct: 569 VTCNIFL-------------RMLREKLDPPQDGAKFLDELVVRLLKRQRNLGAS 609



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/377 (22%), Positives = 168/377 (44%), Gaps = 5/377 (1%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F ++I   + S + +   K+  +M+      +  ++  + K YG    P ++++L   MS
Sbjct: 75  FYSLIENYAYSSDFNSLEKVLNRMRLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRMS 134

Query: 127 QDKNVKPNDRTY----NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
            +   KP  +++    N++++A     ++ E +N V       I P+ +++N + ++  +
Sbjct: 135 FEFYCKPTVKSFNSVLNVIIQAGFHDRAL-EFYNHVVGAKDMNILPNVLSFNLIIKSMCK 193

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G    A ++  EM   +  P+  T   ++ G CK   +++A+  L  M+     P+   
Sbjct: 194 LGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPAT 253

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           FN LI G     D   V K +  M   G  P+ VT++T++      G + K   + D MV
Sbjct: 254 FNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMV 313

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
            +   P+   +  +  G V+ G       +L  M + G   N  +++ ++SG     K +
Sbjct: 314 SSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSE 373

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            AM ++++  + G   N   Y  L+ G    ++P  A ++L  M +KG  P   T   + 
Sbjct: 374 EAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLM 433

Query: 423 DSWRAIGLAREAKRVLK 439
             +  +G + +A  V K
Sbjct: 434 KGFFEVGNSHKAIEVWK 450


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 204/457 (44%), Gaps = 40/457 (8%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A ++ + L      P +  + +L+ AL R    + +  L + +    +KPD + +  ++N
Sbjct: 115 AGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLN 174

Query: 73  ACSESGNVDEAMKIFQKMKDSGCK--PTTSTYNTLIKGYGNVGKPEESLKLL-QLMSQDK 129
              +SG+V +A+K+  +M   G    P  +  NT++ G   +G+ ++++  + + M    
Sbjct: 175 GLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVH 234

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP--------------------- 168
              PN  TYN L  A+C    I  A  +V +M   G+ P                     
Sbjct: 235 GCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAA 294

Query: 169 ----------------DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
                           +AVTY+TLA A+        A ++  EM ++  RP+      ++
Sbjct: 295 LEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMI 354

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           SG  + G + DA      MK+     +   +N LI GF   K      + L  M+  G++
Sbjct: 355 SGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQ 414

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           PDV T++T++     AG      E+   M+  G +P +  F  L  GY +AG+  +A  I
Sbjct: 415 PDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRI 474

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
             SM +  + PN V++ T+I   C + ++  A+ ++++M E  +  N+ TY  LL G  +
Sbjct: 475 FRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQD 534

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
            K   +A EL+  M E+   P   T+ ++ +    IG
Sbjct: 535 KKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIG 571



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 182/389 (46%), Gaps = 9/389 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKD--GMKPDSILFNAMINACSESGNVDEAM 84
           P +    T+V  L +  R +  +  + +  +   G  P+++ +N + +A    G++  A 
Sbjct: 201 PDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMAC 260

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR----TYNI 140
           KI  +M+  G  P   T NT+I G   VG+   +L+  +   + + V P  R    TY+ 
Sbjct: 261 KIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFR---EKRTVWPEARGNAVTYST 317

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L  A+   N+++ A  + ++M   G +PDAV Y T+     Q G    A      M+   
Sbjct: 318 LASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAG 377

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
            + + +   I++ G+C++  + +A   L  MK + + P++  +N+L+ G     D   VD
Sbjct: 378 FKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVD 437

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           + L  M + G +P VVTF T++  +  AG   +   IF  M +A I+P+  +++ L    
Sbjct: 438 ELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFL 497

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            ++ E   A  +   MR+  V  NV  +  ++ G  +    ++A  + ++M E    PN 
Sbjct: 498 CKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNY 557

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEK 409
            T + L+    E  +  R +  +Q  ++K
Sbjct: 558 VTVDVLMEWLPEIGETERLKCFMQQRDQK 586



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 194/450 (43%), Gaps = 31/450 (6%)

Query: 20  LIEEGHRPTLITYT-------------TLVAALTRQKRFKSILSLISKVEKDGMKPDS-I 65
           ++  GH P+  T +              L+A  +      S+ SL S   +  + P S +
Sbjct: 40  ILLHGHTPSAATLSLLRLSPGLASELYALIAEPSHAFTPASLASLHSLAARHRIPPPSAL 99

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGC-KPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           L + ++   S      EA    +    SG   P  S +N+L+   G  G      +L   
Sbjct: 100 LLSKLVRRFSSPA---EAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTS 156

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG--IQPDAVTYNTLARAYAQ 182
           M +D +VKP+  TY IL+   C    + +A  V+ +M + G  + PD    NT+     +
Sbjct: 157 M-RDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCK 215

Query: 183 YGETYRAEQMLFEMQNN--QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            G   +A   + E   +     PN  T   +   +C+ G++  A + + RM++  V PN+
Sbjct: 216 IGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNV 275

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFG-----VKPDVVTFSTIMDAWSSAGLMGKCQ 295
           +  N++I G   +     V  AL    E        + + VT+ST+  A+     +    
Sbjct: 276 ITMNTIIGGLCRVGR---VGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAM 332

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           E+F +M   G  PD  ++  +  G  +AG    A +   SM+K G   +   +  +I G+
Sbjct: 333 ELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGF 392

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C   K+  A  + E+M  +G+ P++ TY TLL G  +A      +ELL  M + G +P  
Sbjct: 393 CRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSV 452

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEEDR 445
            T   +   +   G   EA R+ +S +E R
Sbjct: 453 VTFGTLVHGYCKAGKTDEALRIFRSMDEAR 482



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 7/207 (3%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NIL+G    K K HEA+ +   +   G +P + TY TL++ L +   F ++  L+  +  
Sbjct: 386 NILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMID 445

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
           DG +P  + F  +++   ++G  DEA++IF+ M ++  +P T  YNTLI       + + 
Sbjct: 446 DGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDV 505

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           ++KL   M ++KNV  N  TYN L++    K   E+A+ ++ +M      P+ VT + L 
Sbjct: 506 AIKLFDEM-REKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLM 564

Query: 178 RAYAQYGETYRAEQML--FEMQNNQVR 202
               + GET R +  +   + ++N VR
Sbjct: 565 EWLPEIGETERLKCFMQQRDQKDNHVR 591



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/257 (20%), Positives = 113/257 (43%), Gaps = 36/257 (14%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALT----------------------------------- 40
           +F+ + + GHRP  + Y T+++ LT                                   
Sbjct: 334 LFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFC 393

Query: 41  RQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS 100
           R+K+      L+ +++  G++PD   +N +++   ++G+     ++   M D GC+P+  
Sbjct: 394 RKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVV 453

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
           T+ TL+ GY   GK +E+L++ + M + + ++PN   YN L+   C    ++ A  +  +
Sbjct: 454 TFGTLVHGYCKAGKTDEALRIFRSMDEAR-IQPNTVIYNTLIDFLCKSREVDVAIKLFDE 512

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           M    +  +  TYN L +         +A +++  M+  +  PN  T  +++    + G 
Sbjct: 513 MREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGE 572

Query: 221 MEDAMRFLYRMKELEVH 237
            E    F+ +  + + H
Sbjct: 573 TERLKCFMQQRDQKDNH 589


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 198/432 (45%), Gaps = 2/432 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK   A   F+ L  +G  P  +T+T+++  L + +R    + L  +++ +   P    +
Sbjct: 286 GKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAY 345

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N MI      G  +EA  + ++ K  GC P+   YN ++   G  GK EE+L++L+ M  
Sbjct: 346 NTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKM 405

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D    PN  +YNIL+   C    +E A  V   M  +G+ P+ +T N +     +     
Sbjct: 406 D--AAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLD 463

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +   + +    P+  T   ++ G  + G + DA     +M +    PN VV+ SLI
Sbjct: 464 EACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLI 523

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           + F      +   K    M   G  PD++  +  MD    AG + K + +F+++   G+ 
Sbjct: 524 RNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLT 583

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+  +SIL  G V+ G  +    +   M++ G+H +   +  VI G+C + K+ +A  +
Sbjct: 584 PDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQL 643

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
            E+M   G+ P + TY +++ G  +  +   A  L +  + K V         + D +  
Sbjct: 644 LEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGK 703

Query: 428 IGLAREAKRVLK 439
           +G   EA  +L+
Sbjct: 704 VGRIDEAYLILE 715



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/487 (22%), Positives = 225/487 (46%), Gaps = 7/487 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L   G+   A  + + + E G  P +IT   ++  L + +R     S+   ++    
Sbjct: 418 IDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVC 477

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PDS+ F ++I+     G V++A  +++KM DSG  P    Y +LI+ +   G+ E+  K
Sbjct: 478 TPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHK 537

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M   +   P+    N  +        IE+   +  ++ A G+ PD  +Y+ L    
Sbjct: 538 IYKEMMH-RGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGL 596

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G +    ++ +EM+   +  + R   I++ G+CK G +  A + L  MK   + P +
Sbjct: 597 VKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTV 656

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V + S+I G   I   D +D+A  L EE     V  +VV +S+++D +   G + +   I
Sbjct: 657 VTYGSVIDGLAKI---DRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLI 713

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            +++++ G+ P+ + ++ L    V+A E  +A     +M+     PN V ++ +++G C 
Sbjct: 714 LEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCK 773

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             K  +A   +++M + G+ PN  TY T++ G         A++L +  +  G  P  + 
Sbjct: 774 VRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSAC 833

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIP 477
              + +       A +A  + +        + +K   + ++++H+   L  +      + 
Sbjct: 834 YNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQAAIVGAVLR 893

Query: 478 GVVSSEH 484
            +  S+H
Sbjct: 894 EMAKSQH 900



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/457 (21%), Positives = 199/457 (43%), Gaps = 2/457 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            V   K  EA  +   + +   RP    YTTL+ AL+       +L+L+ ++++ G +  
Sbjct: 177 FVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVT 236

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             LF  +I   +  G VD A+ +  +MK +        YN  I  +G VGK + + K   
Sbjct: 237 VHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFH 296

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            + + + + P+D T+  ++   C    ++EA  +  ++ ++   P    YNT+   Y   
Sbjct: 297 EL-KSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSV 355

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A  +L   +     P+      I++   ++G +E+A+R L  MK ++  PNL  +
Sbjct: 356 GKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMK-MDAAPNLTSY 414

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N LI       + +   K    M+E G+ P+++T + ++D    A  + +   IF  +  
Sbjct: 415 NILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDH 474

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
               PD   F  L  G  R G+   A  +   M   G  PN V++T++I  +    + + 
Sbjct: 475 KVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKED 534

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
              IY++M   G +P+L      +    +A +  +   L + ++ +G+ P   +  ++  
Sbjct: 535 GHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIH 594

Query: 424 SWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESI 460
                G +++  ++    +E    +  +   I ++  
Sbjct: 595 GLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGF 631



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/389 (20%), Positives = 171/389 (43%), Gaps = 4/389 (1%)

Query: 25  HRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAM 84
           H P    Y  L+  + R +  + +  ++ ++   G  P +     M+ +  +S  + EA 
Sbjct: 130 HSPE--AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAF 187

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
            + + M+    +P  S Y TLI       + +  L LL+ M Q+   +     +  L+  
Sbjct: 188 GVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQM-QEIGYEVTVHLFTTLICV 246

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +  +  ++ A +++ +M ++    D V YN     + + G+   A +   E+++  + P+
Sbjct: 247 FAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPD 306

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
           + T   ++   CK   +++A+     +   +  P +  +N++I G+  +   +     L 
Sbjct: 307 DVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLE 366

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
             +  G  P V+ ++ I+      G + +   I + M K    P++  ++IL     +AG
Sbjct: 367 RQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-KMDAAPNLTSYNILIDMLCKAG 425

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           E + A  +  SM++ G+ PN++    +I   C A ++  A SI+  +      P+  T+ 
Sbjct: 426 ELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFC 485

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           +L+ G G   +   A  L + M + G  P
Sbjct: 486 SLIDGLGRHGKVNDAYMLYEKMLDSGQTP 514



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 126/283 (44%), Gaps = 4/283 (1%)

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
           P+A  YN L    A+       EQ+L EM      P+  TC  +V+ + K   + +A   
Sbjct: 132 PEA--YNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGV 189

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
           +  M++ +  P    + +LI       ++D +   L  M+E G +  V  F+T++  ++ 
Sbjct: 190 IETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAR 249

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
            G +     + D+M       D+ ++++    + + G+   A      ++  G+ P+ V 
Sbjct: 250 EGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVT 309

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           FT++I   C A ++  A+ ++E++      P +  Y T++ GYG   +   A  LL+  +
Sbjct: 310 FTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQK 369

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            KG  P       +       G   EA R+L++ + D  + PN
Sbjct: 370 RKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMD--AAPN 410


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 218/447 (48%), Gaps = 43/447 (9%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            V  G+  +AH +F  ++E+G  P ++   +++  L + K      S++ K+   G+ PD
Sbjct: 144 FVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPD 203

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              ++ +I+   +S  +D+A ++ ++M ++G +P + TYN+LI GY   G   ES+++ +
Sbjct: 204 LFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 263

Query: 124 LMSQD----------------------------------KNVKPNDRTYNILVRAW--CS 147
            MS                                    K  KP+  +Y+ ++  +   +
Sbjct: 264 QMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATAT 323

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
            + + +  N+   M+  GI P+   +N L  AYA+ G   +A  +  +MQN  + P+  T
Sbjct: 324 DSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVT 383

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
              ++S  C+ G ++DA+     M ++ V P+  V+  LI+G  +  +   + KA  L+ 
Sbjct: 384 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE---LVKAKELIS 440

Query: 268 EFGVK----PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           E   K    P V  FS+I++     G + + ++I D MV+ G  P++  F+ L +GY   
Sbjct: 441 EMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLV 500

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G  ++A ++L +M   G+ PN  ++ T++ G+C   ++  A++++  M   G+ P    Y
Sbjct: 501 GNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLY 560

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKG 410
             +L G  +A++   A+++   M E G
Sbjct: 561 SIILHGLFQARRTTAAKKMFHEMIESG 587



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 205/416 (49%), Gaps = 10/416 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVA--ALTRQKRFKSILSLISKVEKD 58
           ++ L   G+ +EA  IF+ ++ +G +P +I+Y+T++   A         + ++ + +   
Sbjct: 281 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 340

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+ P+  +FN +INA +  G +D+AM IF+ M++ G  P T T+ T+I     +G+ +++
Sbjct: 341 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 400

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY-NTLA 177
           L     M  D  V P++  Y  L++  C+   + +A  ++ +M+   I P  V Y +++ 
Sbjct: 401 LHKFNHMV-DIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 459

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               + G     + ++  M     RPN  T   ++ GYC  GNME+A   L  M  + + 
Sbjct: 460 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 519

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKC 294
           PN  ++ +L+ G+     +  +D ALT+  +    GVKP  V +S I+     A      
Sbjct: 520 PNCYIYGTLVDGYC---KNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 576

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
           +++F +M+++G    IH + ++  G  R     +A  +L  +    V  +++ F  VIS 
Sbjct: 577 KKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISA 636

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
                + Q A  +++ +   G+ PN++TY  ++    + +    A+ L   +E+ G
Sbjct: 637 MFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 692



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 186/389 (47%), Gaps = 39/389 (10%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT+ TY  L+    R  R    L+++ ++ K+G+ PD   + ++I    + G VD+A  +
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 156

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F +M + G  P     N++IK    + + +++  ++Q M  D  + P+  TY++++   C
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMV-DSGIAPDLFTYSLIIDGLC 215

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
              ++++A  V+ +MV +G +P+++TYN+L   Y+  G    + ++  +M +  V P   
Sbjct: 216 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 275

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
            C   +    K G   +A                 +F+S++                   
Sbjct: 276 NCNSFIHALFKHGRTNEAK---------------CIFDSMVLK----------------- 303

Query: 267 EEFGVKPDVVTFSTIMDAWSSA--GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
              G KPD++++ST++  +++A    +     IF+ M+  GI P+ HVF+IL   Y R G
Sbjct: 304 ---GPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCG 360

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              KA  I   M+  G+ P+ V F TVIS  C   ++  A+  +  M +IG+ P+   Y 
Sbjct: 361 MMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYG 420

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            L+ G     +  +A+EL+  M  K + P
Sbjct: 421 CLIQGCCNHGELVKAKELISEMMNKDIPP 449



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/421 (21%), Positives = 190/421 (45%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           + H IFN ++ +G  P    +  L+ A  R       + +   ++  GM PD++ F  +I
Sbjct: 329 DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 388

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           ++    G +D+A+  F  M D G  P+ + Y  LI+G  N G+  ++ +L+  M      
Sbjct: 389 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIP 448

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P  + ++ ++   C +  + E  +++  MV +G +P+ VT+N+L   Y   G    A  
Sbjct: 449 PPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFA 508

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L  M +  + PN    G +V GYCK G ++DA+     M    V P  V+++ ++ G  
Sbjct: 509 LLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLF 568

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
             + +    K    M E G    + T+  ++          +   + + +    ++ DI 
Sbjct: 569 QARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII 628

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            F+I+     + G  Q+A+ +  ++  YG+ PN+  ++ +I+        + A +++  +
Sbjct: 629 TFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISV 688

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
            + G   + +    ++       +  +A   L ++ E  +  + STI L+A  +   G+ 
Sbjct: 689 EKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMI 748

Query: 432 R 432
           +
Sbjct: 749 K 749



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 133/295 (45%), Gaps = 7/295 (2%)

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
           P   TYN L   Y +         ++  +  N + P++ +  +I  G+ K+G ++ A   
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIY-GFVKDGEVDKAHCL 156

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
              M E  V P +++ NS+IK    +K+ D  +  +  M + G+ PD+ T+S I+D    
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 216

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
           +  M K + + + MV+AG  P+   ++ L  GY  +G   ++  +   M   GV P V  
Sbjct: 217 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 276

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE--ELLQV 405
             + I       +   A  I++ M   G  P++ +Y T+L GY  A     A+   +  +
Sbjct: 277 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 336

Query: 406 MEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESI 460
           M  KG+ P K    ++ +++   G+  +A  +     ED Q+     D +   ++
Sbjct: 337 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIF----EDMQNKGMIPDTVTFATV 387



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/291 (18%), Positives = 139/291 (47%), Gaps = 1/291 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  E   I + +++ G RP ++T+ +L+         +   +L+  +   G+
Sbjct: 459 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGI 518

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+  ++  +++   ++G +D+A+ +F+ M   G KPT+  Y+ ++ G     +   + K
Sbjct: 519 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKK 578

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M +      +  TY +++   C  N  +EA  ++ K+ A  ++ D +T+N +  A 
Sbjct: 579 MFHEMIE-SGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 637

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A+++   +    + PN +T  ++++   KE + E+A      +++     + 
Sbjct: 638 FKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDS 697

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
            + N +++  L+  +       L+++ E  +  +  T S +   +S  G++
Sbjct: 698 RLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMI 748


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 218/447 (48%), Gaps = 43/447 (9%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            V  G+  +AH +F  ++E+G  P ++   +++  L + K      S++ K+   G+ PD
Sbjct: 58  FVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPD 117

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              ++ +I+   +S  +D+A ++ ++M ++G +P + TYN+LI GY   G   ES+++ +
Sbjct: 118 LFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 177

Query: 124 LMSQD----------------------------------KNVKPNDRTYNILVRAW--CS 147
            MS                                    K  KP+  +Y+ ++  +   +
Sbjct: 178 QMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATAT 237

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
            + + +  N+   M+  GI P+   +N L  AYA+ G   +A  +  +MQN  + P+  T
Sbjct: 238 DSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVT 297

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
              ++S  C+ G ++DA+     M ++ V P+  V+  LI+G  +  +   + KA  L+ 
Sbjct: 298 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE---LVKAKELIS 354

Query: 268 EFGVK----PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           E   K    P V  FS+I++     G + + ++I D MV+ G  P++  F+ L +GY   
Sbjct: 355 EMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLV 414

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G  ++A ++L +M   G+ PN  ++ T++ G+C   ++  A++++  M   G+ P    Y
Sbjct: 415 GNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLY 474

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKG 410
             +L G  +A++   A+++   M E G
Sbjct: 475 SIILHGLFQARRTTAAKKMFHEMIESG 501



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 205/416 (49%), Gaps = 10/416 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVA--ALTRQKRFKSILSLISKVEKD 58
           ++ L   G+ +EA  IF+ ++ +G +P +I+Y+T++   A         + ++ + +   
Sbjct: 195 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 254

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+ P+  +FN +INA +  G +D+AM IF+ M++ G  P T T+ T+I     +G+ +++
Sbjct: 255 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 314

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY-NTLA 177
           L     M  D  V P++  Y  L++  C+   + +A  ++ +M+   I P  V Y +++ 
Sbjct: 315 LHKFNHMV-DIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 373

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               + G     + ++  M     RPN  T   ++ GYC  GNME+A   L  M  + + 
Sbjct: 374 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 433

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKC 294
           PN  ++ +L+ G+     +  +D ALT+  +    GVKP  V +S I+     A      
Sbjct: 434 PNCYIYGTLVDGYC---KNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 490

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
           +++F +M+++G    IH + ++  G  R     +A  +L  +    V  +++ F  VIS 
Sbjct: 491 KKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISA 550

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
                + Q A  +++ +   G+ PN++TY  ++    + +    A+ L   +E+ G
Sbjct: 551 MFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 606



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 186/389 (47%), Gaps = 39/389 (10%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT+ TY  L+    R  R    L+++ ++ K+G+ PD   + ++I    + G VD+A  +
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 70

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F +M + G  P     N++IK    + + +++  ++Q M  D  + P+  TY++++   C
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMV-DSGIAPDLFTYSLIIDGLC 129

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
              ++++A  V+ +MV +G +P+++TYN+L   Y+  G    + ++  +M +  V P   
Sbjct: 130 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 189

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
            C   +    K G   +A                 +F+S++                   
Sbjct: 190 NCNSFIHALFKHGRTNEAK---------------CIFDSMVLK----------------- 217

Query: 267 EEFGVKPDVVTFSTIMDAWSSA--GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
              G KPD++++ST++  +++A    +     IF+ M+  GI P+ HVF+IL   Y R G
Sbjct: 218 ---GPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCG 274

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              KA  I   M+  G+ P+ V F TVIS  C   ++  A+  +  M +IG+ P+   Y 
Sbjct: 275 MMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYG 334

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            L+ G     +  +A+EL+  M  K + P
Sbjct: 335 CLIQGCCNHGELVKAKELISEMMNKDIPP 363



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/429 (21%), Positives = 194/429 (45%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           + H IFN ++ +G  P    +  L+ A  R       + +   ++  GM PD++ F  +I
Sbjct: 243 DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 302

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           ++    G +D+A+  F  M D G  P+ + Y  LI+G  N G+  ++ +L+  M      
Sbjct: 303 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIP 362

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P  + ++ ++   C +  + E  +++  MV +G +P+ VT+N+L   Y   G    A  
Sbjct: 363 PPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFA 422

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L  M +  + PN    G +V GYCK G ++DA+     M    V P  V+++ ++ G  
Sbjct: 423 LLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLF 482

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
             + +    K    M E G    + T+  ++          +   + + +    ++ DI 
Sbjct: 483 QARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII 542

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            F+I+     + G  Q+A+ +  ++  YG+ PN+  ++ +I+        + A +++  +
Sbjct: 543 TFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISV 602

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
            + G   + +    ++       +  +A   L ++ E  +  + STI L+A  +   G  
Sbjct: 603 EKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKY 662

Query: 432 REAKRVLKS 440
           RE  ++L +
Sbjct: 663 REHIKLLPA 671



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 133/295 (45%), Gaps = 7/295 (2%)

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
           P   TYN L   Y +         ++  +  N + P++ +  +I  G+ K+G ++ A   
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIY-GFVKDGEVDKAHCL 70

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
              M E  V P +++ NS+IK    +K+ D  +  +  M + G+ PD+ T+S I+D    
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
           +  M K + + + MV+AG  P+   ++ L  GY  +G   ++  +   M   GV P V  
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 190

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE--ELLQV 405
             + I       +   A  I++ M   G  P++ +Y T+L GY  A     A+   +  +
Sbjct: 191 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 250

Query: 406 MEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESI 460
           M  KG+ P K    ++ +++   G+  +A  +     ED Q+     D +   ++
Sbjct: 251 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIF----EDMQNKGMIPDTVTFATV 301



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/289 (19%), Positives = 137/289 (47%), Gaps = 1/289 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  E   I + +++ G RP ++T+ +L+         +   +L+  +   G+
Sbjct: 373 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGI 432

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+  ++  +++   ++G +D+A+ +F+ M   G KPT+  Y+ ++ G     +   + K
Sbjct: 433 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKK 492

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M +      +  TY +++   C  N  +EA  ++ K+ A  ++ D +T+N +  A 
Sbjct: 493 MFHEMIE-SGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 551

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A+++   +    + PN +T  ++++   KE + E+A      +++     + 
Sbjct: 552 FKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDS 611

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            + N +++  L+  +       L+++ E  +  +  T S +   +S  G
Sbjct: 612 RLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 660



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 52/115 (45%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F+ +   G  P + TY+ ++  L +++ ++   +L   VEK G   DS L 
Sbjct: 555 GRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLL 614

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           N ++        V +A      + ++      ST + L   +   GK  E +KLL
Sbjct: 615 NHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 669


>gi|125537003|gb|EAY83491.1| hypothetical protein OsI_38705 [Oryza sativa Indica Group]
          Length = 696

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 192/390 (49%), Gaps = 36/390 (9%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G++P + ++NA+I A   +G VD A   FQ+M   GC+P   TYN+L+ G    G  +E+
Sbjct: 183 GLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTYNSLVHGVCRRGIVDEA 242

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           ++L++ M + + ++PN  TY +LV  +C+   +EEA+ ++ KM   G+ P   TY TL  
Sbjct: 243 VRLVRQM-EGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVH 301

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM------- 231
              +  E  +A +ML +   ++   +   C  ++    K+   ++A+ F  RM       
Sbjct: 302 GVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFAKRMSARGYLL 361

Query: 232 -------------KELEV---------------HPNLVVFNSLIKGFLDIKDSDGVDKAL 263
                        K LEV               +P   V+  +IK  L+ K+    +  L
Sbjct: 362 DSTAFGIVMSCSLKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYL 421

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M   G+   V++++ ++D +  AG + K +EI  +M   G  P++  F+ L  GY + 
Sbjct: 422 GHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKL 481

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G    A+ +L  + ++G  P+++ FT++I G CN  ++  A   +E+M E G+ PN +TY
Sbjct: 482 GNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTY 541

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             L+     A    +A +LL  M+  GV P
Sbjct: 542 NVLMHTLCSAGHVNKAIDLLNKMKIDGVTP 571



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 97/442 (21%), Positives = 199/442 (45%), Gaps = 38/442 (8%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           V  G    A+  F  +  +G RP   TY +LV  + R+      + L+ ++E +G++P+ 
Sbjct: 199 VRAGAVDTAYLRFQQMPADGCRPDRFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNV 258

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-Q 123
             +  +++    +G V+EA ++  KMK+ G  P+ +TY TL+ G     + +++ ++L  
Sbjct: 259 FTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSD 318

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT-------- 175
            +  + ++ P+    + ++     K+  +EA     +M A G   D+  +          
Sbjct: 319 WLGHETSLHPS--ACHTMLYCLSKKDMAKEAVEFAKRMSARGYLLDSTAFGIVMSCSLKC 376

Query: 176 --------LARAYAQYG-----ETY--------------RAEQMLFEMQNNQVRPNERTC 208
                   L  ++ + G     + Y              +A   L  M    +  +  + 
Sbjct: 377 LEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSY 436

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
            +++  + K G ++ A   +  M++    PNLV FN+LI G+  + +       L ++ E
Sbjct: 437 NMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLME 496

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G  PD++TF++++D   +   +      F++M + G+ P+   +++L      AG   K
Sbjct: 497 HGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNK 556

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  +L  M+  GV P+   F  +I  +C   K+ +A  I+  M   G+ P+  TY +L+ 
Sbjct: 557 AIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIK 616

Query: 389 GYGEAKQPWRAEELLQVMEEKG 410
              + ++  +A+E+L   E  G
Sbjct: 617 ALCDERRVNKAKEILFARERSG 638



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 113/225 (50%), Gaps = 2/225 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++  V  G   +A  I   + ++G  P L+T+ TL++  ++     +   ++  + + G 
Sbjct: 440 IDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGF 499

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I F ++I+    +  +D+A   F++M + G +P   TYN L+    + G   +++ 
Sbjct: 500 MPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAID 559

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M  D  V P+  ++N L+ ++C    +++A ++   MV  G+ PD+ TYN+L +A 
Sbjct: 560 LLNKMKID-GVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKAL 618

Query: 181 AQYGETYRAEQMLFEMQNNQVR-PNERTCGIIVSGYCKEGNMEDA 224
                  +A+++LF  + +     N ++   IV+   K G   +A
Sbjct: 619 CDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFSEA 663



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/335 (22%), Positives = 132/335 (39%), Gaps = 37/335 (11%)

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           LV +W        A  V  +M   G++P    YN L  A  + G    A     +M  + 
Sbjct: 159 LVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADG 218

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
            RP+  T   +V G C+ G +++A+R + +M+   + PN+  +  L+ GF +    +   
Sbjct: 219 CRPDRFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAF 278

Query: 261 KALTLMEEFGVKPDVVTFSTIMDA----------------W---------SSAGLMGKCQ 295
           + L  M+E GV P   T+ T++                  W         S+   M  C 
Sbjct: 279 RMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCL 338

Query: 296 EIFDDMVKAGIE-----------PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
               DM K  +E            D   F I+    ++  E      +L S  K G +P 
Sbjct: 339 SK-KDMAKEAVEFAKRMSARGYLLDSTAFGIVMSCSLKCLEVSDLCELLDSFIKNGGNPG 397

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
             ++  VI    N     +A      M   G+  ++ +Y  ++  + +A    +AEE+++
Sbjct: 398 FDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVK 457

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            M++KG  P   T   +   +  +G    AK VLK
Sbjct: 458 EMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLK 492



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 73/156 (46%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A   F  + E G RP   TY  L+  L         + L++K++ DG+ PD+  FNA+I
Sbjct: 521 DAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALI 580

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
            +      VD+A  IF  M   G  P + TYN+LIK   +  +  ++ ++L    +    
Sbjct: 581 LSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSGCS 640

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ 167
             N+++Y  +V A        EA  ++ K ++   Q
Sbjct: 641 TSNNQSYWPIVAALAKMGQFSEAGELMDKYLSRNAQ 676



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/311 (18%), Positives = 119/311 (38%), Gaps = 36/311 (11%)

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
            L  ++ + G    A ++  +M    +RP+      +++   + G ++ A     +M   
Sbjct: 158 ALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPAD 217

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
              P+   +NSL+ G       D   + +  ME  G++P+V T++ ++D + +AG + + 
Sbjct: 218 GCRPDRFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEA 277

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM--RKYGVHPNV------- 345
             + D M + G+ P    +  L  G  R  E  KA  +L+     +  +HP+        
Sbjct: 278 FRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYC 337

Query: 346 --------------------------VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
                                       F  V+S     +++     + +   + G NP 
Sbjct: 338 LSKKDMAKEAVEFAKRMSARGYLLDSTAFGIVMSCSLKCLEVSDLCELLDSFIKNGGNPG 397

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
              Y  ++      K   +A   L  M  KG+     +  +V D +   G   +A+ ++K
Sbjct: 398 FDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVK 457

Query: 440 SAEEDRQSMPN 450
              +D+  +PN
Sbjct: 458 EM-QDKGFLPN 467


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 124/479 (25%), Positives = 225/479 (46%), Gaps = 7/479 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+LV  GK   A  +++ +++        T   +V  L ++ + +    LI K    G 
Sbjct: 144 LNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGC 203

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +N +I+   + G+ + A  +F+++K  G  PT  TY  +I G+   GK E   K
Sbjct: 204 MPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDK 263

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  MS+ + +  +   YN ++ A        EA + V  M+ SG  PD  TYN L    
Sbjct: 264 LLVEMSE-RGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGS 322

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              GE ++AEQ+L +     + PN+ +   ++  YCK+G    A+  L +M E    P+L
Sbjct: 323 CSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDL 382

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V + +LI G +   +   VD ALT+   M E GV PD   ++ +M      G +   + +
Sbjct: 383 VTYAALIHGLIVAGE---VDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVL 439

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
             +M+   + PD  + + L  G++R G+ ++A+ +     + G+ P VV +  +I G+C 
Sbjct: 440 LAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCK 499

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              M+ A+  +++M +   +P+  TY T++ GY +      A  +  +M +   +P   T
Sbjct: 500 FGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVT 559

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQI 476
             L+ + +   G    A++  K     R         I +    +  NL+ + S F Q+
Sbjct: 560 YTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQM 618



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 180/407 (44%), Gaps = 38/407 (9%)

Query: 45  FKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK-MKDSGCKPTTSTYN 103
           F  + SL+  ++   + P    F+ +I+  ++ G VD A++ ++  +K   C P   + N
Sbjct: 82  FSEVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCN 141

Query: 104 TLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVA 163
           +L+      GK E + K+   M  D+N + ++ T  I+V+  C +  +E+ W ++ K   
Sbjct: 142 SLLNVLVKHGKVEIACKVYDEMV-DRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWG 200

Query: 164 SGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED 223
            G  P+ V YNTL                                   + GYCK+G+ E 
Sbjct: 201 RGCMPNIVFYNTL-----------------------------------IDGYCKKGDTER 225

Query: 224 AMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD 283
           A      +K     P +  + ++I GF      + VDK L  M E G+   +  ++ I+D
Sbjct: 226 ANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIID 285

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
           A    G   +  +    M+K+G +PD+  ++IL  G    GE  KAE +L    K G+ P
Sbjct: 286 AQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLP 345

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           N V +T +I  +C   +  RA+ +  KM E G  P+L TY  L+ G   A +   A  + 
Sbjct: 346 NKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVR 405

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
             M EKGV P  +   ++       G    AK VL +   D+   P+
Sbjct: 406 NKMVEKGVLPDANIYNVLMSGLCKKGRLPAAK-VLLAEMLDQNVAPD 451



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 189/416 (45%), Gaps = 17/416 (4%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +I+ G  P + TY  L+              L+ +  K G+ P+ + +  +I+   + G 
Sbjct: 303 MIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGE 362

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
              A+ +  KM + G KP   TY  LI G    G+ + +L +   M + K V P+   YN
Sbjct: 363 YLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVE-KGVLPDANIYN 421

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           +L+   C K  +  A  ++ +M+   + PDA    TL   + ++G+   A++ LFE+   
Sbjct: 422 VLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKK-LFELTIE 480

Query: 200 Q-VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
           + + P       ++ GYCK G M+DA+    RM +    P+   ++++I G++ + D  G
Sbjct: 481 KGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHG 540

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
             +   LM +   KP+VVT++ +++ +  +G + + ++ F  M+   ++P++  ++IL  
Sbjct: 541 ALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIG 600

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM----QRA--------MS 366
            + +     KA S    M      PN V +  +++G  N V      QR+        + 
Sbjct: 601 CFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLE 660

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            +  M   G +    +Y ++L    + K    A  L   M  KG  P    + LVA
Sbjct: 661 SFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLP--DPVSLVA 714



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 19/231 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A   F  +I+  H P   TY+T++    +       L +   + K   KP+ + +
Sbjct: 501 GMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTY 560

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +IN    SG+++ A K F++M     KP   TY  LI  +       ++    + M  
Sbjct: 561 TLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLM 620

Query: 128 DKNVKPNDRTYNILV--------------RAWCSKNS-IEEAWNVVYKMVASGIQPDAVT 172
           +K + PND TYN L+              R+  ++NS + E++ +   M++ G    A +
Sbjct: 621 EKCL-PNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGM---MISDGWDRRAAS 676

Query: 173 YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED 223
           YN++     Q+     A  +  +M +    P+  +   ++ G C EG  +D
Sbjct: 677 YNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQD 727


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 118/499 (23%), Positives = 225/499 (45%), Gaps = 72/499 (14%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK-------------- 57
           +A  +F  ++     P++++++ L+ AL   K + S++SL  ++ K              
Sbjct: 55  DAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVV 114

Query: 58  ---------------------DGMKPDSILFNAMINACSESGNVDEAMKIFQKM-KDSGC 95
                                 G+  + ++FN ++        V +A+ +F+K+ +++ C
Sbjct: 115 NSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENIC 174

Query: 96  KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
           +P    Y T++ G    G  +++  LL+LM Q  + KPN   Y+I++ A+C    ++ A 
Sbjct: 175 EPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQG-STKPNTCIYSIVIDAFCKDGMLDGAT 233

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
           +++ +M    I PD  TY+TL  A  +  +      +  EM +  + PN  T   ++ G 
Sbjct: 234 SLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGL 293

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF---------LDIKDS---------- 256
           CKEG +EDA   +  M E  V P+++ +N +I G+          +I DS          
Sbjct: 294 CKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNI 353

Query: 257 -------------DGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
                          +D+A+ +  E    G+KP +VT + ++      G     Q  FD+
Sbjct: 354 ISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDE 413

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+ AG  PD++    L  GY + G  ++A S    + +     N+ ++T VI G C   K
Sbjct: 414 MLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGK 473

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           + +A + +EK+  IG++P++ TY  ++ GY +      A+++L+ ME+ G      T  +
Sbjct: 474 LDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNV 533

Query: 421 VADSWRAIGLAREAKRVLK 439
           +   +       E K  L+
Sbjct: 534 IVRGFLRSNKVSEMKAFLE 552



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/421 (23%), Positives = 207/421 (49%), Gaps = 2/421 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEG-HRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           L  + K  +A ++F  L+ E    P  + Y T++  L ++   +    L+  +E+   KP
Sbjct: 152 LFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKP 211

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           ++ +++ +I+A  + G +D A  +  +MK     P   TY+TLI     + +  E+++ L
Sbjct: 212 NTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQ-WENVRTL 270

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
            L     N+ PN  T+N ++   C +  +E+A  ++  M+  G+ PD +TYN +   Y  
Sbjct: 271 FLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGL 330

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+  RA ++   M N  + PN  +  I+++GY ++  +++AM+    + +  + P++V 
Sbjct: 331 RGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVT 390

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
            N L+ G  ++  +         M   G  PD+ T  T++  +   GL+ +    F  + 
Sbjct: 391 CNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLE 450

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           +   + +I +++ +  G  + G+  KA +    +   G+HP+V+ +T +ISG+C    + 
Sbjct: 451 RRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLD 510

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A  +  KM + G   + +TY  ++ G+  + +    +  L+ +  K    + +T++L+ 
Sbjct: 511 EAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLM 570

Query: 423 D 423
           D
Sbjct: 571 D 571



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 1/175 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+   A   F+ ++  GH P L T+ TL+    +    +  +S   K+E+     +  ++
Sbjct: 402 GRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIY 461

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            A+I+   ++G +D+A   F+K+   G  P   TY  +I GY   G  +E+  +L+ M +
Sbjct: 462 TAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKM-E 520

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           D     ++RTYN++VR +   N + E    + ++       +A T   L    A+
Sbjct: 521 DNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAE 575



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/291 (18%), Positives = 111/291 (38%), Gaps = 71/291 (24%)

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV-------DKALTLMEEF---- 269
           ++DA     +M   +  P++V F+ L+K  + +K    V        K    + EF    
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 270 ------------------------GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
                                   G+  + V F+T++    +   +     +F  +V+  
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172

Query: 306 I-EPDIHVFSILAKGYVRAGEPQK-----------------------------------A 329
           I EP+  ++  +  G  + G  QK                                   A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGA 232

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
            S+L  M++  + P++  ++T+I   C   + +   +++ +M  + I PN+ T+ +++ G
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
             +  +   AEE+++ M EKGV P   T  ++ D +   G    A+ +  S
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDS 343


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 183/360 (50%), Gaps = 1/360 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +I+ GH P+++T+ +L+    R  R    L +  ++   G KP+ +++N +I+   +S  
Sbjct: 142 MIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           VD A+ +  +M+  G  P   TYN+LI G  + G+  ++ +++  M++ + + P+  T+N
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK-REIYPDVFTFN 260

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+ A   +  + EA     +M+   + PD VTY+ L      Y     AE+M   M + 
Sbjct: 261 ALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK 320

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+  T  I+++GYCK   +E  M+    M +  V  N V +  LI+G+      +  
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVA 380

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
           ++    M   GV P+++T++ ++      G + K   I  DM K G++ DI  ++I+ +G
Sbjct: 381 EEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRG 440

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             +AGE   A  I  S+   G+ P++  +TT++ G       + A +++ KM E GI PN
Sbjct: 441 MCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 186/390 (47%), Gaps = 1/390 (0%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
           L T   L+    R  +    LS + K+ K G +P  + F +++N       V +A+ +F 
Sbjct: 116 LCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFD 175

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
           +M   G KP    YNT+I G     + + +L LL  M +D  + P+  TYN L+   CS 
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD-GIGPDVVTYNSLISGLCSS 234

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
               +A  +V  M    I PD  T+N L  A  + G    AE+   EM    + P+  T 
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
            +++ G C    +++A      M      P++V ++ LI G+   K  +   K    M +
Sbjct: 295 SLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            GV  + VT++ ++  +  AG +   +EIF  MV  G+ P+I  +++L  G    G+ +K
Sbjct: 355 RGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEK 414

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  IL  M+K G+  ++V +  +I G C A ++  A  IY  +   G+ P++ TY T++ 
Sbjct: 415 ALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMML 474

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
           G  +      A+ L + M+E G+ P +  +
Sbjct: 475 GLYKKGLRREADALFRKMKEDGILPNECYV 504



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/425 (24%), Positives = 208/425 (48%), Gaps = 2/425 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P++  ++ L++A+++ K++  ++ L  +++  G+  +    N ++N       +  A+  
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             KM   G +P+  T+ +L+ G+    +  ++L +   M      KPN   YN ++   C
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV-GMGYKPNVVIYNTIIDGLC 197

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               ++ A +++ +M   GI PD VTYN+L       G    A +M+  M   ++ P+  
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   ++    KEG + +A  F   M    + P++V ++ LI G       D  ++    M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              G  PDVVT+S +++ +  +  +    ++F +M + G+  +   ++IL +GY RAG+ 
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             AE I   M   GVHPN++ +  ++ G C+  K+++A+ I   M + G++ ++ TY  +
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNII 437

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
           + G  +A +   A ++   +  +G+ P   T   +       GL REA  + +  +ED  
Sbjct: 438 IRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKED-G 496

Query: 447 SMPNK 451
            +PN+
Sbjct: 497 ILPNE 501



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 181/339 (53%), Gaps = 7/339 (2%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           + ++A Y+F+ ++  G++P ++ Y T++  L + K+  + L L++++EKDG+ PD + +N
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           ++I+    SG   +A ++   M      P   T+N LI      G+  E+ +  + M + 
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR- 284

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           +++ P+  TY++L+   C  + ++EA  +   MV+ G  PD VTY+ L   Y +  +   
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
             ++  EM    V  N  T  I++ GYC+ G +  A     RM    VHPN++ +N L+ 
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404

Query: 249 GFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           G   + D+  ++KAL +   M++ G+  D+VT++ I+     AG +    +I+  +   G
Sbjct: 405 G---LCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           + PDI  ++ +  G  + G  ++A+++   M++ G+ PN
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 172/342 (50%), Gaps = 1/342 (0%)

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D+++ +F  M      P+ + ++ L+     + K +  + L + M Q   +  N  T N
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM-QMLGIPHNLCTCN 120

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           IL+  +C  + +  A + + KM+  G +P  VT+ +L   + +    Y A  M  +M   
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
             +PN      I+ G CK   +++A+  L RM++  + P++V +NSLI G          
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            + ++ M +  + PDV TF+ ++DA    G + + +E +++M++  ++PDI  +S+L  G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
                   +AE +   M   G  P+VV ++ +I+G+C + K++  M ++ +M + G+  N
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             TY  L+ GY  A +   AEE+ + M   GV P   T  ++
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVL 402



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 1/235 (0%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           V +G+  EA   +  +I     P ++TY+ L+  L    R      +   +   G  PD 
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           + ++ +IN   +S  V+  MK+F +M   G    T TY  LI+GY   GK   + ++ + 
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M     V PN  TYN+L+   C    IE+A  ++  M  +G+  D VTYN + R   + G
Sbjct: 387 MVF-CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAG 445

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           E   A  +   +    + P+  T   ++ G  K+G   +A     +MKE  + PN
Sbjct: 446 EVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 97/215 (45%)

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           ++D++   + M +    P++  F+ L+     +K  D V      M+  G+  ++ T + 
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           +++ +     +         M+K G EP I  F  L  G+ R      A  +   M   G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
             PNVV++ T+I G C + ++  A+ +  +M + GI P++ TY +L+ G   + +   A 
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
            ++  M ++ + P   T   + D+    G   EA+
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 1/128 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK + A  IF  ++  G  P +ITY  L+  L    + +  L +++ ++K+GM  D + +
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I    ++G V +A  I+  +   G  P   TY T++ G    G   E+  L + M +
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494

Query: 128 DKNVKPND 135
           D  + PN+
Sbjct: 495 D-GILPNE 501


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 201/415 (48%), Gaps = 1/415 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P +++Y  ++  L   KR+  +  L+ ++ + G  P+ + FN +I     +G  +  
Sbjct: 220 GCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERV 279

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            ++  +M D GC P    Y T++ G    G  E + ++L  M     +KPN   YN +++
Sbjct: 280 HQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPS-YGLKPNVVCYNTVLK 338

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             CS    E+A  ++ +M  +    D VT+N L   + Q G  YR  ++L +M  +   P
Sbjct: 339 GLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVP 398

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   +++G+CKEG +++A+  L  M      PN + +  ++KG    +     +  +
Sbjct: 399 DVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLM 458

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           + M E G  P+ VTF+T+++     GL+ +  E+   M+  G  PD+  +S +  G  +A
Sbjct: 459 SQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKA 518

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+  +A  +L  M   G+ PN ++++++ S      ++ R + +++ + ++ I  +   Y
Sbjct: 519 GKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLY 578

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             ++    +     RA E L  M   G  P +ST  ++     + G  +EA+ +L
Sbjct: 579 NAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEML 633



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 204/426 (47%), Gaps = 39/426 (9%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA-CSESGNVD--EA 83
           P   TY  +V AL  + R    LS++ ++ + G  P   +++ ++ A CS  G      A
Sbjct: 113 PNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSA 172

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKP-EESLKLLQLMSQDKNVKPNDRTYNILV 142
           +++ Q +   GC       N ++    + G   +E+L+LL+ +       P+  +YN ++
Sbjct: 173 VRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVL 232

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
           +  C         +++ +MV  G  P+ VT+NTL     + G   R  Q+L +M ++   
Sbjct: 233 KGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCT 292

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL----------- 251
           P+ R    ++ G CKEG++E A   L RM    + PN+V +N+++KG             
Sbjct: 293 PDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEEL 352

Query: 252 --DIKDSDG-------------------VDKALTLME---EFGVKPDVVTFSTIMDAWSS 287
             ++ D+D                    V + + L+E   E G  PDV+T++T+++ +  
Sbjct: 353 LAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCK 412

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
            GL+ +   +   M   G  P+   ++I+ KG   A     AE +++ M + G  PN V 
Sbjct: 413 EGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVT 472

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           F TVI+  C    +++A+ + ++M   G +P+L +Y T++ G G+A +   A ELL VM 
Sbjct: 473 FNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 532

Query: 408 EKGVRP 413
            KG+ P
Sbjct: 533 NKGMSP 538



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 191/394 (48%), Gaps = 7/394 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G  P ++T+ TL+  L R   F+ +  +++++   G  PD  ++  +++   + G+
Sbjct: 251 MVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGH 310

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           ++ A +I  +M   G KP    YNT++KG  +  + E++ +LL  M  D +   +D T+N
Sbjct: 311 LEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMF-DNDCPLDDVTFN 369

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           ILV  +C    +     ++ +M+  G  PD +TY T+   + + G    A  +L  M   
Sbjct: 370 ILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAAC 429

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
             RPN  +  I++ G C      DA   + +M E    PN V FN++I  FL  K    V
Sbjct: 430 GCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVIN-FLCKKGL--V 486

Query: 260 DKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           ++A+ L+++    G  PD++++ST++D    AG   +  E+ + MV  G+ P+  ++S +
Sbjct: 487 EQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSI 546

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
           A    + G   +   +  +++   +  + V++  VIS  C      RA+     M   G 
Sbjct: 547 ASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGC 606

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
            PN  TY  L+ G         A+E+L  +  KG
Sbjct: 607 MPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 166/344 (48%), Gaps = 9/344 (2%)

Query: 102 YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
           YN ++ GY   G+   + +L    +    V PN  TY  +VRA C++  I +A +V+ +M
Sbjct: 86  YNAMVSGYCRAGQLASARRL----AASVPVPPNAYTYFPVVRALCARGRIADALSVLDEM 141

Query: 162 VASGIQPDAVTYNTLARAYAQ--YGETYR-AEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
              G  P    Y+ +  A      G  +R A ++L ++       +   C ++++  C +
Sbjct: 142 RRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQ 201

Query: 219 G-NMEDAMRFLYRM-KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           G ++++A+R L  +       P++V +N+++KG    K    V   +  M   G  P+VV
Sbjct: 202 GGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVV 261

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           TF+T++      GL  +  ++   MV  G  PDI +++ +  G  + G  + A  IL  M
Sbjct: 262 TFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRM 321

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
             YG+ PNVV + TV+ G C+A + ++A  +  +M +     +  T+  L+  + +    
Sbjct: 322 PSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLV 381

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
           +R  ELL+ M E G  P   T   V + +   GL  EA  +LKS
Sbjct: 382 YRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKS 425



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 86/165 (52%), Gaps = 1/165 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  KG   +A  +   ++  G  P LI+Y+T++  L +  +    L L++ +   GM
Sbjct: 477 INFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 536

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P++I+++++ +A S+ G ++  +++F  ++D   +     YN +I      G  + +++
Sbjct: 537 SPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIE 596

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
            L  M       PN+ TY IL+R   S+  ++EA  ++ ++ + G
Sbjct: 597 FLAYMVS-SGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 192/379 (50%), Gaps = 4/379 (1%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P+   +  +I   S +G++D A+++ ++MK +G +     + TL+KG  + G+  E+L+ 
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
            + M++D    P+  TY  LV A C     +EA  ++ +M+A G  PD VT++TL     
Sbjct: 67  FRAMAKD--CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLC 124

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN-MEDAMRFLYRMKELEVHPNL 240
           ++G   +A ++L ++    +  ++     I+   C + N +E A + L  +      P +
Sbjct: 125 KFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTV 184

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           ++FN +I GF   KD D   K L +M E G  P+V TF+ ++     A  +G+ Q++ + 
Sbjct: 185 LMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEK 244

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV  G  P++  +S +  G  + G+   A  +   M +    PNVV    +I G C A +
Sbjct: 245 MVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKR 304

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS-TIQ 419
           ++ A  +Y +M E G  P++ TY +L+ G  ++ Q   A +L Q + E GV    + T  
Sbjct: 305 IEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYS 364

Query: 420 LVADSWRAIGLAREAKRVL 438
            +   + A+G   +A R+ 
Sbjct: 365 TLFHGYAALGRMADACRIF 383



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 209/451 (46%), Gaps = 12/451 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   GK  EA  +   +I  G  P  +T++TL+  L +    +    ++  V + GM
Sbjct: 85  VHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGM 144

Query: 61  KPDSILFNAMIN-ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
                 F  +I   C++  +V+ A K+   +   G  PT   +N +I G+      + + 
Sbjct: 145 GNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAY 204

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           KLL++M + K   PN  T+ IL+   C  N + EA  ++ KMV  G  P+ VTY+T+   
Sbjct: 205 KLLEVMIE-KGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVING 263

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G+   A ++   M+     PN  T  I++ G CK   +E+A +  +RM+E    P+
Sbjct: 264 LCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPD 323

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLME---EFGVK-PDVVTFSTIMDAWSSAGLMGKCQ 295
           ++ +NSLI G      S  VD+A  L +   E GV   + VT+ST+   +++ G M    
Sbjct: 324 IITYNSLIDGLC---KSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADAC 380

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
            IF  +V  G  PD+  ++ L   Y +     +   ++  M   G  P V   + V+ G 
Sbjct: 381 RIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGL 440

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR--- 412
                 +RA+ +++ M   G   +   Y  ++ G   A +  +A  +L+ + +K  R   
Sbjct: 441 FEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFN 500

Query: 413 PKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           P  S +  + +S   +G   +AK++L    E
Sbjct: 501 PSSSAVDALVESLCQVGRTDDAKQLLHKMSE 531



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 187/417 (44%), Gaps = 6/417 (1%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +   +I +G  PT++ +  ++    + K   S   L+  + + G  P+   F  +I 
Sbjct: 168 ASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILIT 227

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              ++  V EA ++ +KM   GC P   TY+T+I G    G+ +++ +L QLM + +N  
Sbjct: 228 GLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMER-RNCP 286

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           PN  T+NIL+   C    IEEA  + ++M  +G  PD +TYN+L     +  +   A Q+
Sbjct: 287 PNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQL 346

Query: 193 LFEMQNNQVR-PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
              +  + V   N  T   +  GY   G M DA R    + +    P+L  + SLI  + 
Sbjct: 347 FQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYC 406

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
               +  V + +  M   G  P V T S ++          +  ++FD M   G   D  
Sbjct: 407 KTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDAL 466

Query: 312 VFSILAKGYVRAGEPQKAESILTSM---RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           +++++ +G  RA +  KA ++L  +   R    +P+      ++   C   +   A  + 
Sbjct: 467 IYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLL 526

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            KM E G    + +Y  LL G    ++   A ++ + M   G  P+ ST+ +V  SW
Sbjct: 527 HKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVI-SW 582



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/457 (23%), Positives = 193/457 (42%), Gaps = 46/457 (10%)

Query: 20  LIEE----GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           L+EE    G     + +TTL+  L    R    L     + KD   PD + + A+++A  
Sbjct: 31  LLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVMTYTALVHALC 89

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ-------- 127
           ++G  DEA  + ++M   GC P T T++TLI G    G  E++ ++L+ + Q        
Sbjct: 90  KAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDA 149

Query: 128 ---------------------------DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
                                       K   P    +N+++  +C    ++ A+ ++  
Sbjct: 150 AFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEV 209

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           M+  G  P+  T+  L     +      A+Q+L +M      PN  T   +++G CK+G 
Sbjct: 210 MIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQ 269

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           ++DA      M+     PN+V  N LI G    K  +   +    M E G  PD++T+++
Sbjct: 270 VDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNS 329

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV-FSILAKGYVRAGEPQKAESILTSMRKY 339
           ++D    +  + +  ++F  + ++G+     V +S L  GY   G    A  I + +   
Sbjct: 330 LIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDK 389

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
           G  P++  +T++I  +C   +    + + E+M   G  P + T   +L G  E     RA
Sbjct: 390 GFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERA 449

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            +L   M  +G         LV +     G+AR +K 
Sbjct: 450 IQLFDSMAARGCTDDALIYNLVVE-----GMARASKH 481



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/416 (22%), Positives = 192/416 (46%), Gaps = 9/416 (2%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +   ++  G  P ++TY+T++  L +Q +      L   +E+    P+ +  N +I
Sbjct: 237 EAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILI 296

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   ++  ++EA +++ +M+++GC P   TYN+LI G     + +E+ +L Q + +    
Sbjct: 297 DGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVS 356

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
             N  TY+ L   + +   + +A  +   +V  G  PD  TY +L   Y +        +
Sbjct: 357 AANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVE 416

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           ++ EM +    P   T   ++ G  +  + E A++    M       + +++N +++G  
Sbjct: 417 LVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEG-- 474

Query: 252 DIKDSDGVDKALTLMEEFGVK------PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
            +  +   +KAL ++E+   K      P       ++++    G     +++   M + G
Sbjct: 475 -MARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERG 533

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
               +  ++ L  G  R     +A  +  +M   G  P +     VIS  C+A K+  A 
Sbjct: 534 FAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAY 593

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            + ++M ++G  P+++T  TL+ GY ++ +   A +LL+ M E G+ P  +T  L+
Sbjct: 594 ELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/390 (23%), Positives = 183/390 (46%), Gaps = 5/390 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  +A+ +F  +      P ++T+  L+  L + KR +    L  ++ + G 
Sbjct: 261 INGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGC 320

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS-TYNTLIKGYGNVGKPEESL 119
            PD I +N++I+   +S  VDEA ++FQ + +SG     + TY+TL  GY  +G+  ++ 
Sbjct: 321 APDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADAC 380

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           ++  ++  DK   P+  TY  L+  +C  +   E   +V +M + G  P   T + +   
Sbjct: 381 RIFSMLV-DKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGG 439

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM---KELEV 236
             +   T RA Q+   M       +     ++V G  +      A+  L ++   ++ + 
Sbjct: 440 LFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKF 499

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           +P+    ++L++    +  +D   + L  M E G    V +++ ++   S      +  +
Sbjct: 500 NPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQ 559

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F+ MV AG  P+I   +++      A +   A  ++  M K G  P++    T+I G+C
Sbjct: 560 VFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYC 619

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            + +   A  + E+M E G+ PN  T++ L
Sbjct: 620 KSGRADLARKLLEEMTEAGLEPNDTTHDLL 649



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 167/357 (46%), Gaps = 3/357 (0%)

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
           C P   TY  LI+G+ + G  + +++LL+ M +    + N   +  L++  C    + EA
Sbjct: 5   CMPNKFTYGILIRGFSSAGDLDIAIQLLEEM-KSNGFEGNAVVHTTLMKGLCDAGRVVEA 63

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
               ++ +A    PD +TY  L  A  + G+   A+ ML EM      P+  T   ++ G
Sbjct: 64  LEH-FRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDG 122

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS-DGVDKALTLMEEFGVKP 273
            CK G+ E A R L  + +  +  +   F ++I+   +  +S +   K L ++   G  P
Sbjct: 123 LCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTP 182

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
            V+ F+ +++ +  A  +    ++ + M++ G  P++  F+IL  G  +A    +A+ +L
Sbjct: 183 TVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLL 242

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M   G  PNVV ++TVI+G C   ++  A  +++ M      PN+ T+  L+ G  +A
Sbjct: 243 EKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKA 302

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           K+   A +L   M E G  P   T   + D         EA ++ ++  E   S  N
Sbjct: 303 KRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAAN 359


>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Glycine max]
          Length = 918

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 215/462 (46%), Gaps = 40/462 (8%)

Query: 2   NILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           +I+VG     GK   A + F    E+      +TY +++ A  +        +L+ ++E 
Sbjct: 348 SIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEV 407

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+     +++ M++  +  GN ++ + +F ++K+ G  P+  +Y  LI  Y  +GK  +
Sbjct: 408 QGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSK 467

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +L++ ++M     +K N +TY++L+  +        A++V       G++PD V YN + 
Sbjct: 468 ALQISKMMKMS-GIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNII 526

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
            A+       RA  M+ +MQ  + RP  RT   I+ G+ + G M  A+     M+     
Sbjct: 527 TAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCI 586

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P +  +N+LI G ++ +        L  M   GV P+  T++T+M  ++S G   K  + 
Sbjct: 587 PTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQY 646

Query: 298 FDDMVKAGIEPDIH-----------------------------------VFSILAKGYVR 322
           F  +   G+E D++                                   V++IL  G+ R
Sbjct: 647 FSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWAR 706

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G+  +A  ++  MRK GV P++  +T+ ++  C A  MQ+A  I ++M   GI PNLKT
Sbjct: 707 RGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKT 766

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           Y TL+ G+  A  P +A    + M+   ++P K+    +  S
Sbjct: 767 YTTLINGWARASMPEKALSCFEEMKLAELKPDKAAYHCLMTS 808



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 175/353 (49%), Gaps = 1/353 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+    GK  +A  I   +   G +  + TY+ L+    + K + +  S+     KDG+
Sbjct: 456 INLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGL 515

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD +L+N +I A     N+D A+ + ++M+    +PTT T+  +I G+   G+   +L+
Sbjct: 516 KPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALE 575

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +  +M +   + P   TYN L+     K  + +A  ++ +M  +G+ P+  TY TL + Y
Sbjct: 576 IFDMMRRSGCI-PTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGY 634

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A  G+T +A Q    ++N  +  +  T   ++   CK G M+ A+     M    +  N 
Sbjct: 635 ASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNT 694

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            V+N LI G+    D       +  M + GV PD+ T+++ ++A   AG M K  EI  +
Sbjct: 695 FVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQE 754

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
           M   GI+P++  ++ L  G+ RA  P+KA S    M+   + P+   +  +++
Sbjct: 755 MEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAAYHCLMT 807



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 186/389 (47%), Gaps = 7/389 (1%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P    Y  +V    R+            ++  G++P S +++++I+A +   +++EA+ 
Sbjct: 271 KPARKEYGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALH 330

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
             +KMK+ G + T  TY+ ++ G+  +GK + +    +  +++K    N  TY  ++ A 
Sbjct: 331 CVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFK-EAKEKLPSLNAVTYGSIIYAH 389

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C   +++ A  +V +M   GI      Y+T+   Y   G   +   +   ++     P+ 
Sbjct: 390 CQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSV 449

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            + G +++ Y K G +  A++    MK   +  N+  ++ LI GFL +KD      A ++
Sbjct: 450 ISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKD---WANAFSV 506

Query: 266 MEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
            E+F   G+KPDVV ++ I+ A+     M +   +   M K    P    F  +  G+ R
Sbjct: 507 FEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFAR 566

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           AGE ++A  I   MR+ G  P V  +  +I G     KM +A++I ++M   G+ PN  T
Sbjct: 567 AGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHT 626

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           Y TL+ GY       +A +   V+  +G+
Sbjct: 627 YTTLMQGYASLGDTEKAFQYFSVLRNEGL 655



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 162/331 (48%), Gaps = 5/331 (1%)

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F+++K    KP    Y  ++K Y   G    + +  + M Q + ++P+   Y+ L+ A+ 
Sbjct: 266 FERIK----KPARKEYGLMVKYYARRGDMHHARQTFESM-QARGIEPSSHVYSSLIHAYA 320

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               +EEA + V KM   GI+   VTY+ +   +A+ G+   A+    E +      N  
Sbjct: 321 VGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAV 380

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T G I+  +C+  NM+ A   +  M+   +   + ++++++ G+  I + +        +
Sbjct: 381 TYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRL 440

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           +E G  P V+++  +++ ++  G + K  +I   M  +GI+ ++  +S+L  G+++  + 
Sbjct: 441 KECGFSPSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDW 500

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             A S+     K G+ P+VV++  +I+ +C    M RA+ + ++M +    P  +T+  +
Sbjct: 501 ANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPI 560

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           + G+  A +  RA E+  +M   G  P   T
Sbjct: 561 IHGFARAGEMRRALEIFDMMRRSGCIPTVHT 591



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 134/307 (43%)

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KP  + Y ++V+ +  +  +  A      M A GI+P +  Y++L  AYA   +   A  
Sbjct: 271 KPARKEYGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALH 330

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
            + +M+   +     T  IIV G+ K G  + A  +    KE     N V + S+I    
Sbjct: 331 CVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHC 390

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
              + D  +  +  ME  G+   +  + T+MD ++  G   KC  +FD + + G  P + 
Sbjct: 391 QTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVI 450

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            +  L   Y + G+  KA  I   M+  G+  N+  ++ +I+G+        A S++E  
Sbjct: 451 SYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDF 510

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
            + G+ P++  Y  ++  +       RA  +++ M+++  RP   T   +   +   G  
Sbjct: 511 TKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEM 570

Query: 432 REAKRVL 438
           R A  + 
Sbjct: 571 RRALEIF 577


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 195/388 (50%), Gaps = 1/388 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A    + ++ +G     +TY TL+  L +    +    L+ K+E   ++P+ +++
Sbjct: 162 GEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIY 221

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +++   + G V EA  ++  +   G  P   TY  LI G+  +G+  E  +LL  M  
Sbjct: 222 NMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMV- 280

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D+NV  N  TYNIL+ A C K  + +A ++   M+  G +PD VT+NTL   Y  Y +  
Sbjct: 281 DRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVV 340

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++        + P+  +  I++ GYCK   +++A+    +M   ++ PN+V ++SLI
Sbjct: 341 EARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLI 400

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G           +  + + + G  P+V+T++ ++DA     L+ K  E+F+ M + G+ 
Sbjct: 401 DGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLT 460

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P++  ++IL  GY ++    +A ++   M +  + P+ V +  +I G C + ++  A  +
Sbjct: 461 PNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWEL 520

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           +  M + G   ++ TY  L   + + + 
Sbjct: 521 FNVMHDGGPPVDVITYNILFDAFSKIQH 548



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 182/401 (45%), Gaps = 1/401 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
            G  P+++T + L+             S++  V K G + ++I    ++     +G V +
Sbjct: 107 RGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRK 166

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A++    +   G      TY TLI G   +G   E+ +LL  M + + V+PN   YN++V
Sbjct: 167 ALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKM-EGQVVRPNVVIYNMIV 225

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
              C    + EA ++   +V  GI PD  TY  L   +   G+     ++L +M +  V 
Sbjct: 226 DGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVN 285

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
            N  T  I++   CK+G +  A      M E    P+LV FN+L+ G+    D     K 
Sbjct: 286 LNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKL 345

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
                E G+ PDV +++ ++  +     + +   +F+ M    + P+I  +S L  G  +
Sbjct: 346 FDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCK 405

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           +G    A  + +++   G  PNV+ +  ++   C    + +A+ ++  M E G+ PN+ +
Sbjct: 406 SGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSS 465

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           Y  L+ GY ++K+   A  L + M  + + P   T   + D
Sbjct: 466 YNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLID 506



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 184/389 (47%), Gaps = 2/389 (0%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P  + FN ++ +  +  +   A+ + ++M   G  P+  T + LI  Y ++G    +  +
Sbjct: 76  PSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSV 135

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
           L ++ + +  + N  T   +++  C    + +A      +VA G   D VTY TL     
Sbjct: 136 LGMVLK-RGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLC 194

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           + G T  A ++L +M+   VRPN     +IV G CK+G + +A      +    + P++ 
Sbjct: 195 KIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVF 254

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            +  LI GF  +     V + L  M +  V  +V T++ ++DA    G++GK  ++ + M
Sbjct: 255 TYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLM 314

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           ++ G  PD+  F+ L  GY    +  +A  +  +  + G+ P+V  +  +I G+C   ++
Sbjct: 315 IERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRI 374

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             A+S++ KM    + PN+ TY +L+ G  ++ +   A EL   + + G  P   T  ++
Sbjct: 375 DEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIM 434

Query: 422 ADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            D+   I L  +A  +     E R   PN
Sbjct: 435 LDALCKIQLVDKAIELFNLMFE-RGLTPN 462



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 129/281 (45%), Gaps = 1/281 (0%)

Query: 6   GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
           G G+  E   +   +++      + TY  L+ AL ++        + + + + G +PD +
Sbjct: 265 GLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLV 324

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            FN +++      +V EA K+F    + G  P   +YN LI GY    + +E+L L   M
Sbjct: 325 TFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKM 384

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           +  K + PN  TY+ L+   C    I  AW +   +   G  P+ +TYN +  A  +   
Sbjct: 385 NY-KKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQL 443

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
             +A ++   M    + PN  +  I+++GYCK   +++AM     M    + P+ V +N 
Sbjct: 444 VDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNC 503

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
           LI G           +   +M + G   DV+T++ + DA+S
Sbjct: 504 LIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFS 544



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 1/254 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  KG   +AH + N +IE G RP L+T+ TL++             L     + G+
Sbjct: 295 IDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGI 354

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +N +I    ++  +DEA+ +F KM      P   TY++LI G    G+   + +
Sbjct: 355 TPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWE 414

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   +  D    PN  TYNI++ A C    +++A  +   M   G+ P+  +YN L   Y
Sbjct: 415 LFSAI-HDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGY 473

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A  +  EM    + P+  T   ++ G CK G +  A      M +     ++
Sbjct: 474 CKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDV 533

Query: 241 VVFNSLIKGFLDIK 254
           + +N L   F  I+
Sbjct: 534 ITYNILFDAFSKIQ 547



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/298 (19%), Positives = 131/298 (43%), Gaps = 6/298 (2%)

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
           ++I++A  +  +++     P  V +N +  +  +      A  +  +M    + P+  T 
Sbjct: 57  DAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTL 116

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
            I+++ YC  G+M  A   L  + +     N +   +++KG   +  +  V KAL   + 
Sbjct: 117 SILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKG---LCINGEVRKALEFHDS 173

Query: 269 F---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
               G   D VT+ T+++     GL  +  E+   M    + P++ +++++  G  + G 
Sbjct: 174 VVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGL 233

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A  + + +   G+ P+V  +T +I G+C   + +    +   M +  +N N+ TY  
Sbjct: 234 VTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNI 293

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           L+    +     +A ++  +M E+G RP   T   +   +       EA+++  +  E
Sbjct: 294 LIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAE 351


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 191/383 (49%), Gaps = 1/383 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   TY+ L   L+R    K++LSL  K  K+G+       + ++N   + G V  A ++
Sbjct: 303 PDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV 362

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            Q + ++G  PT   YNTLI GY   G+ E +      M + +++KP+  TYN L+   C
Sbjct: 363 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM-KSRHIKPDHITYNALINGLC 421

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               I  A +++ +M  +G+ P   T+NTL  AY + G+  +   +L EMQ N ++PN  
Sbjct: 422 KAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 481

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           + G IV+ +CK G + +A+  L  M   +V PN  V+N++I  +++   +D     +  M
Sbjct: 482 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 541

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           +  G+ P +VT++ ++    +   + + +EI + +    + PD   ++ L       G  
Sbjct: 542 KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 601

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            KA  +   M KYG+   V  +  +ISG   A ++     +Y+KM +  + P+   +  +
Sbjct: 602 DKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIM 661

Query: 387 LWGYGEAKQPWRAEELLQVMEEK 409
           +  Y +     +AE+L + M +K
Sbjct: 662 VEAYSKYGNEIKAEDLRKEMLQK 684



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 106/439 (24%), Positives = 204/439 (46%), Gaps = 2/439 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP-DSIL 66
           G+  +    F  L   G RP    +   V A          + ++ ++ +DG  P ++  
Sbjct: 143 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 202

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I     +G   +A+++F +M +    P   TYNT+I G+   G  E   +L   M 
Sbjct: 203 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 262

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
               +KPN  TYN+L+   C    + E   ++ +M +  + PD  TY+ L    ++ G++
Sbjct: 263 C-HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 321

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
                +  +   N V   + TC I+++G CK+G +  A   L  +    + P  V++N+L
Sbjct: 322 KAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 381

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G+    + +G       M+   +KPD +T++ +++    A  +   Q++  +M   G+
Sbjct: 382 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV 441

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P +  F+ L   Y R G+ +K   +L+ M++ G+ PNVV + ++++ +C   K+  A++
Sbjct: 442 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVA 501

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           I + M    + PN + Y  ++  Y E     +A  L++ M+  G+ P   T  L+     
Sbjct: 502 ILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLC 561

Query: 427 AIGLAREAKRVLKSAEEDR 445
                 EA+ ++ S    R
Sbjct: 562 NQSQISEAEEIINSLSNHR 580



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 215/451 (47%), Gaps = 15/451 (3%)

Query: 7   KGKPHEAHY-IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
           KG   EA + + + ++  G +P  ITY  L++ L R  R     +L+ ++    M PD  
Sbjct: 247 KGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGF 306

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            ++ + +  S +G+    + +F K   +G      T + L+ G    GK   + ++LQ +
Sbjct: 307 TYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 366

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
             +  + P    YN L+  +C    +E A++   +M +  I+PD +TYN L     +   
Sbjct: 367 V-NAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 425

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A+ +L EMQ+N V P   T   ++  Y + G +E     L  M+E  + PN+V + S
Sbjct: 426 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 485

Query: 246 LIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           ++  F     +  + +A+ ++++     V P+   ++ I+DA+   G   +   + + M 
Sbjct: 486 IVNAFCK---NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMK 542

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             GI P I  +++L KG     +  +AE I+ S+  + + P+ V + T+IS  C    + 
Sbjct: 543 SNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNID 602

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
           +A+ + ++M + GI   ++TY  L+ G G A +    E L Q M +  V P  +   ++ 
Sbjct: 603 KALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMV 662

Query: 423 DSWRAIGLAREAKRVLKSAEEDRQSMPNKKD 453
           +++   G   E K     AE+ R+ M  K++
Sbjct: 663 EAYSKYG--NEIK-----AEDLRKEMLQKRN 686



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 183/387 (47%), Gaps = 1/387 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   +Y  ++A + R  R    + +  ++ +  + P+ I +N MI+   + G+++   ++
Sbjct: 198 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 257

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M   G KP   TYN L+ G    G+  E+  LL  M+  K V P+  TY+IL     
Sbjct: 258 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMV-PDGFTYSILFDGLS 316

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                +   ++  K + +G+     T + L     + G+   AE++L  + N  + P   
Sbjct: 317 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 376

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               +++GYC+ G +E A     +MK   + P+ + +N+LI G    +        L  M
Sbjct: 377 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 436

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           ++ GV P V TF+T++DA+   G + KC  +  +M + G++P++  +  +   + + G+ 
Sbjct: 437 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 496

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +A +IL  M    V PN  ++  +I  +       +A  + EKM   GI+P++ TY  L
Sbjct: 497 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLL 556

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRP 413
           + G     Q   AEE++  +    + P
Sbjct: 557 IKGLCNQSQISEAEEIINSLSNHRLIP 583



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/430 (22%), Positives = 194/430 (45%), Gaps = 44/430 (10%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P+L +   L+ AL    R   +      +   G +PD+  +N  + AC  +G++ EA+ +
Sbjct: 127 PSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGM 186

Query: 87  FQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
            ++M +D    P   +YN +I G    G+  +++++   M++ + V PN  TYN ++   
Sbjct: 187 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTE-RAVLPNHITYNTMIDGH 245

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                +E  + +  +MV  G++P+A+TYN                               
Sbjct: 246 IKGGDLEAGFRLRDQMVCHGLKPNAITYN------------------------------- 274

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
               +++SG C+ G M +    L  M   ++ P+   ++ L  G     DS  +   L+L
Sbjct: 275 ----VLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAM---LSL 327

Query: 266 MEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
             ++   GV     T S +++     G +   +E+   +V AG+ P   +++ L  GY +
Sbjct: 328 FGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQ 387

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            GE + A S    M+   + P+ + +  +I+G C A ++  A  +  +M + G+NP ++T
Sbjct: 388 TGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET 447

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           + TL+  YG   Q  +   +L  M+E G++P   +   + +++   G   EA  +L    
Sbjct: 448 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 507

Query: 443 EDRQSMPNKK 452
             +  +PN +
Sbjct: 508 H-KDVLPNAQ 516



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 1/141 (0%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           V  G   +A  +   +   G  P+++TY  L+  L  Q +      +I+ +    + PD+
Sbjct: 526 VEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDA 585

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           + +N +I+AC   GN+D+A+ + Q+M   G K T  TY+ LI G G  G+  E   L Q 
Sbjct: 586 VSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQK 645

Query: 125 MSQDKNVKPNDRTYNILVRAW 145
           M Q+ NV P++  +NI+V A+
Sbjct: 646 MMQN-NVVPSNAIHNIMVEAY 665



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 1/196 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N     GK  EA  I + +  +   P    Y  ++ A            L+ K++ +G+
Sbjct: 487 VNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGI 546

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + +N +I        + EA +I   + +    P   +YNTLI      G  +++L 
Sbjct: 547 SPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD 606

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L Q M +   +K   RTY+ L+        + E   +  KM+ + + P    +N +  AY
Sbjct: 607 LQQRMHK-YGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAY 665

Query: 181 AQYGETYRAEQMLFEM 196
           ++YG   +AE +  EM
Sbjct: 666 SKYGNEIKAEDLRKEM 681


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 116/453 (25%), Positives = 212/453 (46%), Gaps = 42/453 (9%)

Query: 24   GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
            G +P++ T   ++A++ + KR + + SL  ++   G+ P+   FN +IN     GN+ +A
Sbjct: 944  GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 1003

Query: 84   MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
              + ++M+++G  PT  TYNTL+  Y   G+ + +++L+  M   K ++ +  TYN+ + 
Sbjct: 1004 GNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMIC-KGIEADVCTYNVFID 1062

Query: 144  AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
              C+ +   +A+ ++ KM    I P+ VTYNTL   + + G+   A Q+  EM    + P
Sbjct: 1063 NLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSP 1122

Query: 204  NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
            N  T   ++ G+C  G+ E+A+R L  M+   +  N V + +L+ G   +   +  + A 
Sbjct: 1123 NCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNG---LCKHEKFELAK 1179

Query: 264  TLMEEFGVKPDVV---TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
             L+E   V   VV    ++ ++D     G++ +  ++  +M K G+ PD+  +S L  G+
Sbjct: 1180 RLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGF 1239

Query: 321  VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE----------- 369
             R G  + A+ I+  M + G+  N ++++T+I  +C    +  AM +Y            
Sbjct: 1240 CRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADH 1299

Query: 370  ------------------------KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
                                     M  IG+ PN  TY+ ++ GYG    P  A      
Sbjct: 1300 FTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDD 1359

Query: 406  MEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            M + G  P   T   +       G   EAK+ L
Sbjct: 1360 MIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFL 1392



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 200/404 (49%), Gaps = 1/404 (0%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            +N L  +G   +A  +   + E G  PT++TY TL+    ++ R+K+ + LI  +   G+
Sbjct: 991  INGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGI 1050

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            + D   +N  I+    +    +A  + +KM+     P   TYNTLI G+   GK   + +
Sbjct: 1051 EADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQ 1110

Query: 121  LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            +   MS+  ++ PN  TYN L+   C     EEA  ++  M A+G++ + VTY TL    
Sbjct: 1111 VFNEMSK-FDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGL 1169

Query: 181  AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
             ++ +   A+++L  M+ N +        +++ G CK G +++A++ +  M +  V+P++
Sbjct: 1170 CKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDV 1229

Query: 241  VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            + ++SLI GF  + +     + +  M   G+  + + +ST++  +   G + +  +++  
Sbjct: 1230 ITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAV 1289

Query: 301  MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
            M   G   D    ++L     R G+  +AE  L  M + G+ PN + +  +I+G+ +   
Sbjct: 1290 MNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGD 1349

Query: 361  MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
               A S ++ M + G +P+  TY +LL G  +      A++ L 
Sbjct: 1350 PLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLN 1393



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/441 (24%), Positives = 197/441 (44%), Gaps = 37/441 (8%)

Query: 30   ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
            I YT L+  L +       + L+  + KDG+ PD I ++++IN     GN+  A +I  +
Sbjct: 1195 IAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICR 1254

Query: 90   MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
            M  SG       Y+TLI  +   G   E++K+  +M+ + +   +  T N+LV + C   
Sbjct: 1255 MYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGH-GADHFTCNVLVSSLCRDG 1313

Query: 150  SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
             + EA   +  M   G+ P+++TY+ +   Y   G+   A     +M      P+  T G
Sbjct: 1314 KLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYG 1373

Query: 210  IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK------------GFLDIKDSD 257
             ++ G CK GN+ +A +FL R+  +    + V++N+L+                D    +
Sbjct: 1374 SLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQN 1433

Query: 258  GV-----------------DKALTLMEEFGVK-------PDVVTFSTIMDAWSSAGLMGK 293
             V                  KA+T +  FG         P+ V ++ ++D  S AG    
Sbjct: 1434 NVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKA 1493

Query: 294  CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
                F++M+K G  PD   F+ +     R G+  KA    ++MR +GV PN+  +  ++ 
Sbjct: 1494 AFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLH 1553

Query: 354  GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            G+     + R +S+Y  M   GI P+  T+ +L+ G  ++  P    +LL  M  +G   
Sbjct: 1554 GFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLA 1613

Query: 414  KKSTIQLVADSWRAIGLAREA 434
             + T  ++ + +   G  R+A
Sbjct: 1614 DQFTFNILINKYSESGKMRKA 1634



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/424 (23%), Positives = 188/424 (44%), Gaps = 36/424 (8%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            +N    KG+   A  + + +I +G    + TY   +  L    R      L+ K+ K+ +
Sbjct: 1026 LNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMI 1085

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             P+ + +N +IN   + G +  A ++F +M      P   TYN LI G+ +VG  EE+L+
Sbjct: 1086 SPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALR 1145

Query: 121  LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            LL  M +   ++ N+ TY  L+   C     E A  ++ +M  + +    + Y  L    
Sbjct: 1146 LLDHM-EAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGL 1204

Query: 181  AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
             + G    A Q++  M  + V P+  T   +++G+C+ GN++ A   + RM    +  N 
Sbjct: 1205 CKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNK 1264

Query: 241  VVFNSLIKGFLD------------IKDSDG-----------------------VDKALTL 265
            +++++LI  F              + + +G                        +K L  
Sbjct: 1265 IIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCH 1324

Query: 266  MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
            M   G+ P+ +T+  I++ + S G        FDDM+K G  P    +  L KG  + G 
Sbjct: 1325 MSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGN 1384

Query: 326  PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
              +A+  L  +       + VM+ T+++  C +  +  A+++++KM +  + P+  TY +
Sbjct: 1385 LVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSS 1444

Query: 386  LLWG 389
            LL G
Sbjct: 1445 LLTG 1448



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/490 (22%), Positives = 196/490 (40%), Gaps = 72/490 (14%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            +N  V +GK   A  +FN + +    P  +TY  L+        F+  L L+  +E  G+
Sbjct: 1096 INGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGL 1155

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            + + + +  ++N   +    + A ++ ++M+ +        Y  LI G    G  +E+++
Sbjct: 1156 RLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQ 1215

Query: 121  LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L+  M +D  V P+  TY+ L+  +C   +I+ A  ++ +M  SG+  + + Y+TL   +
Sbjct: 1216 LVGNMYKD-GVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNF 1274

Query: 181  AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
             Q+G    A ++   M  N    +  TC ++VS  C++G + +A +FL  M  + + PN 
Sbjct: 1275 CQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNS 1334

Query: 241  VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG----------- 289
            + ++ +I G+  I D          M + G  P   T+ +++      G           
Sbjct: 1335 ITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNR 1394

Query: 290  ----------------LMGKCQE--------IFDDMVKAGIEPDIHVFSILAKGYVR--- 322
                            L   C+         +FD MV+  + PD + +S L  G  R   
Sbjct: 1395 LHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGK 1454

Query: 323  ---------------------------------AGEPQKAESILTSMRKYGVHPNVVMFT 349
                                             AG P+ A      M K G  P+ V F 
Sbjct: 1455 AVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFN 1514

Query: 350  TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
             +I       +M +A   +  M   G+ PNL TY  LL G+ + +   R   L   M  +
Sbjct: 1515 AIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMRE 1574

Query: 410  GVRPKKSTIQ 419
            G+ P K T  
Sbjct: 1575 GIFPDKLTFH 1584



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 115/480 (23%), Positives = 208/480 (43%), Gaps = 43/480 (8%)

Query: 4    LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            L   G   EA  +   + ++G  P +ITY++L+    R    KS   +I ++ + G+  +
Sbjct: 1204 LCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLN 1263

Query: 64   SILFNAMINACSESGNVDEAMKIFQKMKDSG---------------CK------------ 96
             I+++ +I    + GNV EAMK++  M  +G               C+            
Sbjct: 1264 KIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLC 1323

Query: 97   --------PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
                    P + TY+ +I GYG++G P  +      M +     P+  TY  L++  C  
Sbjct: 1324 HMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQ-HPSFFTYGSLLKGLCKG 1382

Query: 149  NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
             ++ EA   + ++       D+V YNTL     + G  + A  +  +M  N V P+  T 
Sbjct: 1383 GNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTY 1442

Query: 209  GIIVSGYCKEGNMEDAM-RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
              +++G C++G    A+  F   M    + PN V++  L+ G   +  +     A    E
Sbjct: 1443 SSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDG---LSKAGHPKAAFYFFE 1499

Query: 268  EF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            E    G  PD V F+ I+D+ S  G M K  + F  M   G+ P++  ++IL  G+ +  
Sbjct: 1500 EMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQ 1559

Query: 325  EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
               +  S+ ++M + G+ P+ + F ++I G   +      + +  KM   G   +  T+ 
Sbjct: 1560 ALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFN 1619

Query: 385  TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
             L+  Y E+ +  +A +L+  M   GV P + T   + +        RE+  VL    E+
Sbjct: 1620 ILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLEN 1679



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 180/411 (43%), Gaps = 6/411 (1%)

Query: 4    LVGKGKPHEAHYIFNCLIEEGHR-PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
            L  KGK   A  +F   +  G   P  + YT LV  L++    K+      ++ K G  P
Sbjct: 1449 LCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCP 1508

Query: 63   DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
            D++ FNA+I++CS  G + +A   F  M+  G  P  +TYN L+ G+    K +  L+ L
Sbjct: 1509 DTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFS---KKQALLRYL 1565

Query: 123  QLMS--QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             L S    + + P+  T++ L+         +    ++ KM+  G   D  T+N L   Y
Sbjct: 1566 SLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKY 1625

Query: 181  AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            ++ G+  +A  ++  M    V P+  T   I +G  K+    ++   L+ M E  V P  
Sbjct: 1626 SESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKH 1685

Query: 241  VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
              + +LI G   + D  G  K    ME  G     V  S ++      G       + D 
Sbjct: 1686 AQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDH 1745

Query: 301  MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
            M++  + P I  F+ L   + R  +  +A  +   M   G+  +VV +  +I G C    
Sbjct: 1746 MLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGD 1805

Query: 361  MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
               A  +YE+M    + PN+ TY  L+     A    + E+LL  ++E+G+
Sbjct: 1806 SAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL 1856



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 175/410 (42%), Gaps = 2/410 (0%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            G   EA  ++  +   GH     T   LV++L R  +       +  + + G+ P+SI +
Sbjct: 1278 GNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITY 1337

Query: 68   NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            + +IN     G+   A   F  M   G  P+  TY +L+KG    G   E+ K L  +  
Sbjct: 1338 DCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHY 1397

Query: 128  DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                  +   YN L+   C   ++ EA  +  KMV + + PD+ TY++L     + G+  
Sbjct: 1398 IPGA-VDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAV 1456

Query: 188  RAEQML-FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A  +    M    + PN      +V G  K G+ + A  F   M +    P+ V FN++
Sbjct: 1457 TAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAI 1516

Query: 247  IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
            I            +   + M  +GV P++ T++ ++  +S    + +   ++  M++ GI
Sbjct: 1517 IDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGI 1576

Query: 307  EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
             PD   F  L  G  ++G P     +L  M   G   +   F  +I+ +  + KM++A  
Sbjct: 1577 FPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFD 1636

Query: 367  IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
            +   M  +G+ P+  TY  +  G  +      +  +L  M E GV PK +
Sbjct: 1637 LVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHA 1686



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 167/372 (44%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            G P  A   F+ +I+ G  P+  TY +L+  L +          ++++       DS+++
Sbjct: 1348 GDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMY 1407

Query: 68   NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            N ++    +SGN+ EA+ +F KM  +   P + TY++L+ G    GK   ++ L      
Sbjct: 1408 NTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMG 1467

Query: 128  DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
               + PN   Y  LV         + A+    +M+  G  PD V +N +  + ++ G+  
Sbjct: 1468 RGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMM 1527

Query: 188  RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            +A      M+   V PN  T  I++ G+ K+  +   +     M    + P+ + F+SLI
Sbjct: 1528 KANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLI 1587

Query: 248  KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             G       D   K L  M   G   D  TF+ +++ +S +G M K  ++ + M   G+ 
Sbjct: 1588 LGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVF 1647

Query: 308  PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
            PD   ++ +  G  +    +++  +L  M + GV P    + T+I+G C    +Q A  +
Sbjct: 1648 PDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKL 1707

Query: 368  YEKMCEIGINPN 379
             ++M  +G   +
Sbjct: 1708 KDEMEALGFGSH 1719



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 82/358 (22%), Positives = 161/358 (44%), Gaps = 9/358 (2%)

Query: 86   IFQKMKDSG--CKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
            IF  + D+   C    S ++ LI+ Y   G +    E+ +L+ L+      KP+  T N+
Sbjct: 899  IFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVG----FKPSVYTCNM 954

Query: 141  LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
            ++ +       E  W++  +M   GI P+  T+N L       G   +A  +L +M+ N 
Sbjct: 955  ILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENG 1014

Query: 201  VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
              P   T   +++ YCK+G  + A+  +  M    +  ++  +N  I        S    
Sbjct: 1015 FVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAY 1074

Query: 261  KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
              L  M +  + P+ VT++T+++ +   G +G   ++F++M K  + P+   ++ L  G+
Sbjct: 1075 LLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGH 1134

Query: 321  VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
               G+ ++A  +L  M   G+  N V + T+++G C   K + A  + E+M    +    
Sbjct: 1135 CHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGH 1194

Query: 381  KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
              Y  L+ G  +      A +L+  M + GV P   T   + + +  +G  + AK ++
Sbjct: 1195 IAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEII 1252



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 102/233 (43%)

Query: 210  IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            +++  Y KEG ++ A+     +  +   P++   N ++   +  K ++ V      M + 
Sbjct: 919  LLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDK 978

Query: 270  GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
            G+ P+V TF+ +++     G + K   +   M + G  P I  ++ L   Y + G  + A
Sbjct: 979  GICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAA 1038

Query: 330  ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
              ++  M   G+  +V  +   I   C   +  +A  + +KM +  I+PN  TY TL+ G
Sbjct: 1039 IELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLING 1098

Query: 390  YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
            + +  +   A ++   M +  + P   T   +      +G   EA R+L   E
Sbjct: 1099 FVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHME 1151



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 1/197 (0%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
             N L  K    E+  + + ++E G  P    Y TL+  + R    +    L  ++E  G 
Sbjct: 1657 FNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 1716

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
                +  +AM+      G  ++AM +   M      PT +T+ TL+  +    K  E+LK
Sbjct: 1717 GSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK 1776

Query: 121  LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L  +M +   +K +   YN+L+   C+      A+ +  +M    + P+  TY  L  A 
Sbjct: 1777 LKGVM-ELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAI 1835

Query: 181  AQYGETYRAEQMLFEMQ 197
            +      + E++L ++Q
Sbjct: 1836 SAANNLIQGEKLLTDLQ 1852



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 1/175 (0%)

Query: 277  TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
             F  ++  +   G++    E F+ +   G +P ++  +++    V+    +   S+   M
Sbjct: 916  VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 975

Query: 337  RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
               G+ PNV  F  +I+G C    +++A ++ ++M E G  P + TY TLL  Y +  + 
Sbjct: 976  SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 1035

Query: 397  WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
              A EL+  M  KG+     T  +  D+      + +A  +LK   ++  S PN+
Sbjct: 1036 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMIS-PNE 1089


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 207/404 (51%), Gaps = 3/404 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA +  + +I +G     ++Y TL+  L +    ++ L ++ K++   ++P+ +++
Sbjct: 148 GKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMY 207

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I++  +   V  A  +  +M      P   TY TLI G   VG+ +E++ L   M  
Sbjct: 208 NTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLL 267

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            KN+KP+  T+NILV   C +  +++A NV+  M+  G+  + VTYN+L   Y    +  
Sbjct: 268 -KNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQEN 326

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A  +   M    V P+ ++  I+++G CK   +++A+     M    + PN V +NSLI
Sbjct: 327 KATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLI 386

Query: 248 KGFLDI-KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
            G L   + SD  D  +  M   G   DV+T+S+++DA      + K   +   +   GI
Sbjct: 387 DGLLKYGRISDAWD-LVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGI 445

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           +P+I+ ++IL  G  + G  + A+++   +   G H +V M+  +++G C       A+S
Sbjct: 446 QPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALS 505

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +  KM + G  P+  TYETL+    E  +  +A +LL+ M  +G
Sbjct: 506 LVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 198/437 (45%), Gaps = 5/437 (1%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P L T+  L+             S+++K+ K G  PD++    +I     +G V EA+ 
Sbjct: 96  QPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALH 155

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
               +   G      +Y TLI G    G+   +L++L+ +     V+PN   YN ++ + 
Sbjct: 156 FHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKID-GLLVQPNVVMYNTIIDSL 214

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C    +  A ++  +M+   I PD VTY TL       G    A  +  +M    ++P+ 
Sbjct: 215 CKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDV 274

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T  I+V G CKEG M+ A   L  M +  V  N+V +NSL+ G+  +K  +        
Sbjct: 275 YTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNT 334

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M   GV PDV ++S +++      ++ +   +F +M    + P+   ++ L  G ++ G 
Sbjct: 335 MARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGR 394

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
              A  ++  M   G   +V+ +++++   C   ++ +A+++  K+ + GI PN+ TY  
Sbjct: 395 ISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTI 454

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
           L+ G  +  +   A+ + Q +  KG         ++ +     GL  EA   L S  ED 
Sbjct: 455 LVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALS-LVSKMEDN 513

Query: 446 QSMPNKKDEIAVESIHR 462
             +P   D +  E++ R
Sbjct: 514 GCIP---DAVTYETLVR 527



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 140/281 (49%), Gaps = 10/281 (3%)

Query: 1   MNILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
            NILV     +G+  +A  +   +I++G    ++TY +L+      K+      + + + 
Sbjct: 277 FNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMA 336

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           + G+ PD   ++ MIN   ++  VDEA+ +F++M      P T TYN+LI G    G+  
Sbjct: 337 RRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRIS 396

Query: 117 ESLKLLQLMSQDKNVKPNDR-TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
           ++  L+  M      +P D  TY+ L+ A C  + +++A  ++ K+   GIQP+  TY  
Sbjct: 397 DAWDLVNEMHNRG--QPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTI 454

Query: 176 LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
           L     + G    A+ +  ++       + +   ++V+G CKEG  ++A+  + +M++  
Sbjct: 455 LVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNG 514

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
             P+ V + +L++      ++D  DKA+ L+ E  V+   V
Sbjct: 515 CIPDAVTYETLVRALF---ENDKNDKAVKLLREMIVQGSAV 552



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 101/228 (44%)

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           I+S   K  +   A+ F  +M+  ++ P+L  FN LI  F  +   +     L  + + G
Sbjct: 70  ILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLG 129

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
             PD VT +T++      G + +     DD++  G   D   +  L  G  + GE + A 
Sbjct: 130 FHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAAL 189

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +L  +    V PNVVM+ T+I   C    +  A  +  +M    I P++ TY TL++G 
Sbjct: 190 QVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGC 249

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
               +   A  L   M  K ++P   T  ++ D     G  ++A+ VL
Sbjct: 250 LIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVL 297


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 195/389 (50%), Gaps = 4/389 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ LV  G+  +  +++  +I     PTLI++  ++  L +  +      +I  ++  G+
Sbjct: 135 MSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGV 194

Query: 61  KPDSILFNAMINACSESGNVDEAMK---IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
             + I +N +I+   + G + +  K   I ++M+  G  P   T+N LI G+        
Sbjct: 195 SANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSA 254

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           ++K+   M++ + VKPN  TYN L+   C+   + EA  +  +MV S ++P+ +T+N L 
Sbjct: 255 AMKVFAEMNR-QGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALL 313

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
             + +     +A ++  +M    + PN  T  I++  YCK+ NMEDA      M    V 
Sbjct: 314 NGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVC 373

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P++  +N LI G     D +     ++ M+   +K D++T++ ++D+  + G M K   +
Sbjct: 374 PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRL 433

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            D+M + G++P    ++ +  GY + G  + A ++ + M K G   NV  +  +I G+C 
Sbjct: 434 LDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCK 493

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             K++ A  +  +M E G+ PN  TYE +
Sbjct: 494 KDKLEDANGLLNEMLEKGLIPNRMTYEIV 522



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 189/374 (50%), Gaps = 4/374 (1%)

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPE 116
           ++P  I FN +IN   + G +++A  I + MK  G      TYNTLI GY   G +GK  
Sbjct: 159 IEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMY 218

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           ++  +L+ M  D  + PN+ T+NIL+  +C   ++  A  V  +M   G++P+ VTYN+L
Sbjct: 219 KADAILKEMRAD-GICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSL 277

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
                  G+   A  +  +M N+ ++PN  T   +++G+CK   ++ A      M +  +
Sbjct: 278 INGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGI 337

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            PN+  +N LI  +   ++ +       +M   GV PDV T++ ++      G +   + 
Sbjct: 338 TPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARN 397

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +  +M    ++ D+  ++IL       GE +KA  +L  M + G+ P+ + + T+I G+C
Sbjct: 398 LVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYC 457

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
               ++ A+++  +M ++G   N+ TY  L+ G+ +  +   A  LL  M EKG+ P + 
Sbjct: 458 KEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRM 517

Query: 417 TIQLVADSWRAIGL 430
           T ++V +     G 
Sbjct: 518 TYEIVTEEMMEKGF 531



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 201/393 (51%), Gaps = 16/393 (4%)

Query: 51  LISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG 110
           ++  V  D    +SI+ + ++ A +++       + F++  D G K + ++ N L+ G  
Sbjct: 80  ILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLV 139

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
            VG+  +   + + M + + ++P   ++NI++   C    + +A +++  M   G+  + 
Sbjct: 140 KVGEIGDMEFVYKEMIR-RRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANV 198

Query: 171 VTYNTLARAY---AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
           +TYNTL   Y    + G+ Y+A+ +L EM+ + + PNE T  I++ G+CK+ N+  AM+ 
Sbjct: 199 ITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKV 258

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDA 284
              M    V PN+V +NSLI G  +   +  V++A  L ++     +KP+++T + +++ 
Sbjct: 259 FAEMNRQGVKPNVVTYNSLINGLCN---NGKVNEATALRDQMVNSCLKPNIITHNALLNG 315

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           +    ++ +  E+FDDM K GI P++  ++IL   Y +    + A ++   M   GV P+
Sbjct: 316 FCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPD 375

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL---LWGYGEAKQPWRAEE 401
           V  +  +I+G C    ++ A ++  +M    +  +L TY  L   L   GE K+  R   
Sbjct: 376 VSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALR--- 432

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           LL  M  KG++P + T   + D +   G  R A
Sbjct: 433 LLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAA 465



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/384 (23%), Positives = 183/384 (47%), Gaps = 4/384 (1%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           I    LV A  +  R +       +    G+K      N +++   + G + +   ++++
Sbjct: 94  IIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKE 153

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M     +PT  ++N +I G   VGK  ++  +++ M + + V  N  TYN L+  +C   
Sbjct: 154 MIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDM-KVRGVSANVITYNTLIDGYCKMG 212

Query: 150 SIEEAWN---VVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            I + +    ++ +M A GI P+ VT+N L   + +      A ++  EM    V+PN  
Sbjct: 213 KIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVV 272

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   +++G C  G + +A     +M    + PN++  N+L+ GF   K      +    M
Sbjct: 273 TYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDM 332

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            + G+ P+V T++ ++DA+     M     ++  M+  G+ PD+  ++ L  G  R G+ 
Sbjct: 333 PKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDL 392

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           + A ++++ M    +  +++ +  +I   CN  +M++A+ + ++MC  G+ P+  TY T+
Sbjct: 393 EAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTM 452

Query: 387 LWGYGEAKQPWRAEELLQVMEEKG 410
           + GY +      A  L   ME+ G
Sbjct: 453 IDGYCKEGNLRAALNLRSQMEKVG 476



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 151/305 (49%), Gaps = 19/305 (6%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F  +  +G +P ++TY +L+  L    +     +L  ++    +KP+ I  NA++N
Sbjct: 255 AMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLN 314

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              ++  V +A ++F  M   G  P  +TYN LI  Y      E++  L ++M   K V 
Sbjct: 315 GFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIM-LGKGVC 373

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+  TYN L+   C K  +E A N+V +M    ++ D +TYN L  +    GE  +A ++
Sbjct: 374 PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRL 433

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           L EM    ++P++ T   ++ GYCKEGN+  A+    +M+++    N+  +N LIKGF  
Sbjct: 434 LDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCK 493

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI-- 310
               +  +  L  M E G+ P+ +T+  +                 ++M++ G  PDI  
Sbjct: 494 KDKLEDANGLLNEMLEKGLIPNRMTYEIVT----------------EEMMEKGFVPDIEG 537

Query: 311 HVFSI 315
           H++ +
Sbjct: 538 HLYKV 542



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/278 (21%), Positives = 118/278 (42%), Gaps = 38/278 (13%)

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
           T    Q+L  +  +    N     I+V  Y K            R  +  +  ++   N 
Sbjct: 74  TQEQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNP 133

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           L+ G + + +   ++     M    ++P +++F+ +++     G + K  +I +DM   G
Sbjct: 134 LMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRG 193

Query: 306 IEPDIHVFSILAKGYVRA---GEPQKAESILTSMR------------------------- 337
           +  ++  ++ L  GY +    G+  KA++IL  MR                         
Sbjct: 194 VSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVS 253

Query: 338 ----------KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
                     + GV PNVV + ++I+G CN  K+  A ++ ++M    + PN+ T+  LL
Sbjct: 254 AAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALL 313

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            G+ + K   +A EL   M ++G+ P  +T  ++ D++
Sbjct: 314 NGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAY 351



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 1/161 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  KG    A  + + +  +  +  LITY  L+ +L  +   K  L L+ ++ + G+KP 
Sbjct: 386 LCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPS 445

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N MI+   + GN+  A+ +  +M+  G     +TYN LIKG+    K E++  LL 
Sbjct: 446 QLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLN 505

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS 164
            M + K + PN  TY I+      K  + +    +YK+  S
Sbjct: 506 EMLE-KGLIPNRMTYEIVTEEMMEKGFVPDIEGHLYKVAVS 545


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 200/402 (49%), Gaps = 3/402 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++E G   T ++   LV  L ++ R +  L  I   E++G  PD + FNA++N    +G+
Sbjct: 260 MVESGCELTSVSVNVLVNGLCKEGRIEEALRFI--YEEEGFCPDQVTFNALVNGLCRTGH 317

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           + + +++   M + G +    TYN+LI G   +G+ +E++++L  M   ++ +PN  TYN
Sbjct: 318 IKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVS-RDCEPNTVTYN 376

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+   C +N +E A  +   + + G+ PD  T+N+L +          A ++  EM+  
Sbjct: 377 TLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEK 436

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+E T  I++   C E  +++A+  L  M+      N+VV+N+LI G          
Sbjct: 437 GCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDA 496

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
           +     ME  GV    VT++T+++    +  + +  ++ D M+  G++PD   ++ + K 
Sbjct: 497 EDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKY 556

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           + + G+ ++A  I+ +M   G  P++V + T+I G C A ++  A  +   +   G+   
Sbjct: 557 FCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLT 616

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            + Y  ++    + K+   A  L + M EKG  P   T ++V
Sbjct: 617 PQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIV 658



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 209/442 (47%), Gaps = 3/442 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++LV   K      + + ++ +   P + T+  L+ AL +  + +  + ++  +   G+
Sbjct: 171 LSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGL 230

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD   F  ++    E  +V+ A++I + M +SGC+ T+ + N L+ G    G+ EE+L+
Sbjct: 231 RPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALR 290

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            +    +++   P+  T+N LV   C    I++   ++  M+  G + D  TYN+L    
Sbjct: 291 FIY---EEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGL 347

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + GE   A ++L  M +    PN  T   ++   CKE ++E A      +    V P++
Sbjct: 348 CKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDV 407

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FNSLI+G     + +   +    M+E G  PD  T+S ++++  S   + +   +  +
Sbjct: 408 CTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKE 467

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M  +G   ++ V++ L  G  +      AE I   M   GV  + V + T+I+G C + +
Sbjct: 468 MELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKR 527

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           ++ A  + ++M   G+ P+  TY T+L  + +     RA +++Q M   G  P   T   
Sbjct: 528 VEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGT 587

Query: 421 VADSWRAIGLAREAKRVLKSAE 442
           +       G    A ++L+S +
Sbjct: 588 LIGGLCKAGRVDVASKLLRSVQ 609



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 192/392 (48%), Gaps = 3/392 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P    Y   ++ L +  + K + +L SK+  D + PD   FN +I A  ++  +  A+ 
Sbjct: 161 KPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAIL 220

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           + + M + G +P   T+ TL++G+      E +L++ +LM +    +    + N+LV   
Sbjct: 221 MLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVE-SGCELTSVSVNVLVNGL 279

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C +  IEEA   +Y+    G  PD VT+N L     + G   +  +M+  M       + 
Sbjct: 280 CKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDV 337

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   ++SG CK G +++A+  L+ M   +  PN V +N+LI         +   +   +
Sbjct: 338 YTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARV 397

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           +   GV PDV TF++++             E+F++M + G +PD   +SIL +       
Sbjct: 398 LTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERR 457

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            ++A  +L  M   G   NVV++ T+I G C   ++  A  I+++M  +G++ +  TY T
Sbjct: 458 LKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNT 517

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           L+ G  ++K+   A +L+  M  +G++P K T
Sbjct: 518 LINGLCKSKRVEEAAQLMDQMIMEGLKPDKFT 549



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 194/419 (46%), Gaps = 6/419 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLIS-KVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           P   + + L+  L RQ    S LSL      +        +F+ ++   + +G+ D  + 
Sbjct: 54  PPDFSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLT 113

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK-LLQLMSQDKNVKPNDRTYNILVRA 144
           + ++M  S      ST+   ++ Y         +  L  LM +D  VKP+ R YN+ +  
Sbjct: 114 LLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSL 173

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
               N ++    +  KMVA  + PD  T+N L RA  +  +   A  ML +M N  +RP+
Sbjct: 174 LVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPD 233

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
           E+T   ++ G+ +E ++E A+R    M E       V  N L+ G   +     +++AL 
Sbjct: 234 EKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNG---LCKEGRIEEALR 290

Query: 265 LM-EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            + EE G  PD VTF+ +++     G + +  E+ D M++ G E D++ ++ L  G  + 
Sbjct: 291 FIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKL 350

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           GE  +A  IL  M      PN V + T+I   C    ++ A  +   +   G+ P++ T+
Sbjct: 351 GEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTF 410

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
            +L+ G         A EL + M+EKG  P + T  ++ +S  +    +EA  +LK  E
Sbjct: 411 NSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEME 469



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 1/139 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P ++TY TL+  L +  R      L+  V+  GM      +N +I A  +     EA
Sbjct: 577 GCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEA 636

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           M++F++M + G  P   TY  + +G  N G P +      +   +K + P   ++  L  
Sbjct: 637 MRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAE 696

Query: 144 AWCSKNSIEEAWNVVYKMV 162
             CS  S+E+    +  MV
Sbjct: 697 GLCSL-SMEDTLIQLINMV 714


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 208/444 (46%), Gaps = 18/444 (4%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E G RP+   Y  +V    R+++ K    ++ ++ + G+ P  +   A+INA  + G + 
Sbjct: 104 ELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMS 163

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +A+++ + MK  GCKP   TYN L++G+ N GK  +++ LL  M +   V P+  TYN+L
Sbjct: 164 DALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM-RACGVNPDAVTYNLL 222

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +R  C    IE A+ ++  M   G+  D  TYN L  A  + G T +A  +   ++   +
Sbjct: 223 IRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGI 282

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           +PN  T   +++G CK G  + A +FL +M      P+   ++S I+    +K S     
Sbjct: 283 KPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLS 342

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            +  M +  VKP  V ++ ++         G     + +MV +G  PD+  ++   + Y 
Sbjct: 343 FIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYC 402

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
             G   +AE++L  M K GV  + + + T++ G  +  +   A+SI ++M  +   PN  
Sbjct: 403 IEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQF 462

Query: 382 TYETLLWGYGEAK--------QP---WRAEE------LLQVMEEKGVRPKKSTIQLVADS 424
           TY  LL      +         P   W+A E      L  VM++    P   T   + + 
Sbjct: 463 TYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEG 522

Query: 425 WRAIGLAREAKRVLKSAEEDRQSM 448
           +   G   EA  ++   +ED  S+
Sbjct: 523 FSEDGRTEEATSLVSLMKEDSISL 546



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 194/420 (46%), Gaps = 18/420 (4%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  +   + E+G  P ++T T ++ A  ++ R    L ++  ++  G KP+   +N
Sbjct: 126 KAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYN 185

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           A++      G V +AM +  KM+  G  P   TYN LI+G    G  E + +LL+LM  D
Sbjct: 186 ALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGD 245

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
             +  +  TYN L+ A C     ++A ++   +   GI+P+AVT+N+L     + G+   
Sbjct: 246 -GLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADI 304

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A + L +M +    P+  T    +   CK    ++ + F+  M + +V P+ V +  +I 
Sbjct: 305 AWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIH 364

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
             L  ++   V +    M   G  PDVVT++T M A+   G + + + +  +M K G+  
Sbjct: 365 KLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTV 424

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI---------------- 352
           D   ++ L  G+   G+   A SIL  M      PN   +  ++                
Sbjct: 425 DTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLT 484

Query: 353 -SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
            +G   A+++     +++ M +    PN  TY ++L G+ E  +   A  L+ +M+E  +
Sbjct: 485 PAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSI 544



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 204/467 (43%), Gaps = 41/467 (8%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G RP   T+ +L+    R  +      L  K+   G   D + +  +I    E+G 
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +DEA+++F +M     +P    Y  L+KG  N  + EE L +L+ M ++   +P+ R Y 
Sbjct: 61  IDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRM-KELGWRPSTRAYA 115

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            +V   C +   +EA  ++ +M   G+ P  VT   +  AY + G    A ++L  M+  
Sbjct: 116 AVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLR 175

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG---------- 249
             +PN  T   +V G+C EG +  AM  L +M+   V+P+ V +N LI+G          
Sbjct: 176 GCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESA 235

Query: 250 --FLDIKDSDGV--------------------DKALTL---MEEFGVKPDVVTFSTIMDA 284
              L + + DG+                    D+A +L   +E  G+KP+ VTF+++++ 
Sbjct: 236 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLING 295

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
              +G      +  + MV AG  PD + +S   +   +    Q+  S +  M +  V P+
Sbjct: 296 LCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPS 355

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
            V +T VI               + +M   G NP++ TY T +  Y    +   AE +L 
Sbjct: 356 TVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLM 415

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
            M + GV         + D   +IG    A  +LK       S+PN+
Sbjct: 416 EMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTS-VASVPNQ 461



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 112/462 (24%), Positives = 195/462 (42%), Gaps = 74/462 (16%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK H+A  + N +   G  P  +TY  L+         +S   L+  +E DG+  D   
Sbjct: 194 EGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYT 253

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM- 125
           +NA+INA  + G  D+A  +F  ++  G KP   T+N+LI G    GK + + K L+ M 
Sbjct: 254 YNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMV 313

Query: 126 -----------------------SQD----------KNVKPNDRTYNILVRAWCSKNS-- 150
                                  SQ+          K+VKP+   Y I++     + +  
Sbjct: 314 SAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYG 373

Query: 151 -IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            +   W    +MV+SG  PD VTY T  RAY   G    AE +L EM  N V  +     
Sbjct: 374 LVARTWG---EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYN 430

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD--------GVDK 261
            ++ G+   G  + A+  L +M  +   PN   +  L++  + ++  +        GV K
Sbjct: 431 TLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWK 490

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           A+ L + FG                          +FD M K    P+   +S + +G+ 
Sbjct: 491 AIELTDVFG--------------------------LFDVMKKNEFLPNSGTYSSILEGFS 524

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
             G  ++A S+++ M++  +  N  ++T +++ +C + +   A  +   M + G  P L 
Sbjct: 525 EDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLM 584

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           +Y+ LL G     Q  +A+E+      K   P +   +++ D
Sbjct: 585 SYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIID 626



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/401 (23%), Positives = 161/401 (40%), Gaps = 88/401 (21%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           TY  L+ AL +  R     SL   +E  G+KP+++ FN++IN   +SG  D A K  +KM
Sbjct: 253 TYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKM 312

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV-------- 142
             +GC P T TY++ I+    +   +E L  +  M Q K+VKP+   Y I++        
Sbjct: 313 VSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQ-KDVKPSTVNYTIVIHKLLKERN 371

Query: 143 ---------------------------RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
                                      RA+C +  + EA NV+ +M  +G+  D + YNT
Sbjct: 372 YGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNT 431

Query: 176 LARAYAQYGETYRA----EQM--------------------------------------- 192
           L   +A  G+T  A    +QM                                       
Sbjct: 432 LMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKA 491

Query: 193 --------LFE-MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                   LF+ M+ N+  PN  T   I+ G+ ++G  E+A   +  MKE  +  N  ++
Sbjct: 492 IELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIY 551

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            +L+  F   K        +  M + G  P ++++  ++      G   K +EIF +   
Sbjct: 552 TALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRW 611

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
               PD  V+ ++  G ++ G    +  ++  + +    P+
Sbjct: 612 KDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPS 652



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/281 (19%), Positives = 118/281 (41%), Gaps = 18/281 (6%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G  P ++TYTT + A   + R     +++ ++ K+G+  D++ +N +++  +  G 
Sbjct: 382 MVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQ 441

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL-----------------L 122
            D A+ I ++M      P   TY  L++    +   E+ L L                  
Sbjct: 442 TDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLF 501

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
            +M +++ + PN  TY+ ++  +      EEA ++V  M    I  +   Y  L   + +
Sbjct: 502 DVMKKNEFL-PNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCK 560

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                 A  ++  M  +   P   +   ++SG   EG  + A       +  +  P+ +V
Sbjct: 561 SKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIV 620

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD 283
           +  +I G +    SD   + + ++E    +P   T++ + +
Sbjct: 621 WKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTE 661



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 29/134 (21%), Positives = 59/134 (44%), Gaps = 1/134 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  + + + E+        YT LV    + KR+     L+  + + G  P  + +
Sbjct: 527 GRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSY 586

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +++     G  D+A +IF   +     P    +  +I G    G  + S +++ +M +
Sbjct: 587 QHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMI-IMLE 645

Query: 128 DKNVKPNDRTYNIL 141
             N +P+ +TY +L
Sbjct: 646 RMNCRPSHQTYAML 659


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 193/387 (49%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L  KG+  EA  + +  ++ G R   + Y T++  L +  + +  + +  K++K  +
Sbjct: 147 MKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRV 206

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I++N +I+   + G VDEA  +  +M ++G +    +YN++I G+ +VG+ + ++K
Sbjct: 207 YPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVK 266

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M     V P+  T+NIL+   C    + EA+NVV  M+  G +PD V+YN L   Y
Sbjct: 267 LLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGY 326

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A+Q+  +M      PN  +   +++GYCK   +++AM  L  M    + P+ 
Sbjct: 327 CLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDT 386

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N L+ G      S      +  M   G   D++T++ ++D +       K   +F  
Sbjct: 387 VTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQH 446

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +++ GI P+I  ++IL  G  ++G  + A+ I   +   G  PN+  +  +I G C    
Sbjct: 447 IIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGF 506

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLL 387
           +  A ++  KM      PN  T++T++
Sbjct: 507 LDEAEALLYKMVNNNYLPNYITFDTIV 533



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/414 (23%), Positives = 203/414 (49%), Gaps = 2/414 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P+LIT++ L+ A  +  +     SL+  + K G + D  +   ++      G V EA+ 
Sbjct: 102 KPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVS 161

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +  +  D G +     Y T+I G   +GK  +++++   M + + V PN   YN ++   
Sbjct: 162 LLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIR-VYPNLIMYNTVIDGL 220

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ-NNQVRPN 204
           C +  ++EA  +  +MV +GI+ D  +YN++   +   G    A ++L EM    +V P+
Sbjct: 221 CKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPD 280

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T  I++ G CK G + +A   +  M +    P++V +N+L+ G+          +   
Sbjct: 281 VYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFD 340

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M E    P+V+++ T+++ +    ++ +   +  +M    + PD   ++ L  G  ++G
Sbjct: 341 KMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSG 400

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
                  ++ +MR  G   +++ +  ++  +    K  +A+++++ + EIGI+PN++TY 
Sbjct: 401 RSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYN 460

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            LL G  ++ +   A+E+ Q++  KG +P   T  ++       G   EA+ +L
Sbjct: 461 ILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALL 514



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 1/258 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P + T+  L+  L +  R     ++++ + K G KPD + +NA++N    SG+V EA ++
Sbjct: 279 PDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQV 338

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F KM +    P   +Y TLI GY  V   +E++ LL  M  +KN+ P+  TYN L+    
Sbjct: 339 FDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEM-HNKNLVPDTVTYNCLLDGLS 397

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                   W++V  M ASG   D +TYN L   Y ++ +  +A  +   +    + PN R
Sbjct: 398 KSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIR 457

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T  I++ G CK G ++ A      +      PN+  +N +I G       D  +  L  M
Sbjct: 458 TYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKM 517

Query: 267 EEFGVKPDVVTFSTIMDA 284
                 P+ +TF TI+ A
Sbjct: 518 VNNNYLPNYITFDTIVRA 535


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 198/402 (49%), Gaps = 1/402 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  E   + + +  +   P   TY+ L   L+R    K++LSL  K  K+G+       
Sbjct: 99  GRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTC 158

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + ++N   + G V  A ++ Q + ++G  PT   YNTLI GY   G+ E +      M +
Sbjct: 159 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM-K 217

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            +++KP+  TYN L+   C    I  A +++ +M  +G+ P   T+NTL  AY + G+  
Sbjct: 218 SRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLE 277

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +   +L EMQ N ++PN  + G IV+ +CK G + +A+  L  M   +V PN  V+N++I
Sbjct: 278 KCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII 337

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             +++   +D     +  M+  G+ P +VT++ ++    +   + + +EI + +    + 
Sbjct: 338 DAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLI 397

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD   ++ L       G   KA  +   M KYG+   V  +  +ISG   A ++     +
Sbjct: 398 PDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYL 457

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
           Y+KM +  + P+   +  ++  Y +     +AE+L + M +K
Sbjct: 458 YQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 499



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 215/451 (47%), Gaps = 15/451 (3%)

Query: 7   KGKPHEAHY-IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
           KG   EA + + + ++  G +P  ITY  L++ L R  R     +L+ ++    M PD  
Sbjct: 62  KGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGF 121

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            ++ + +  S +G+    + +F K   +G      T + L+ G    GK   + ++LQ +
Sbjct: 122 TYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 181

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
             +  + P    YN L+  +C    +E A++   +M +  I+PD +TYN L     +   
Sbjct: 182 V-NAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 240

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A+ +L EMQ+N V P   T   ++  Y + G +E     L  M+E  + PN+V + S
Sbjct: 241 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 300

Query: 246 LIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           ++  F     +  + +A+ ++++     V P+   ++ I+DA+   G   +   + + M 
Sbjct: 301 IVNAFCK---NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMK 357

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             GI P I  +++L KG     +  +AE I+ S+  + + P+ V + T+IS  C    + 
Sbjct: 358 SNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNID 417

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
           +A+ + ++M + GI   ++TY  L+ G G A +    E L Q M +  V P  +   ++ 
Sbjct: 418 KALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMV 477

Query: 423 DSWRAIGLAREAKRVLKSAEEDRQSMPNKKD 453
           +++   G   E K     AE+ R+ M  K++
Sbjct: 478 EAYSKYG--NEIK-----AEDLRKEMLQKRN 501



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 98/396 (24%), Positives = 192/396 (48%), Gaps = 2/396 (0%)

Query: 51  LISKVEKDGMKP-DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY 109
           ++ ++ +DG  P ++  +N +I     +G   +A+++F +M +    P   TYNT+I G+
Sbjct: 1   MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60

Query: 110 GNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
              G  E   +L   M     +KPN  TYN+L+   C    + E   ++ +M +  + PD
Sbjct: 61  IKGGDLEAGFRLRDQMVC-HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPD 119

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
             TY+ L    ++ G++     +  +   N V   + TC I+++G CK+G +  A   L 
Sbjct: 120 GFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQ 179

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            +    + P  V++N+LI G+    + +G       M+   +KPD +T++ +++    A 
Sbjct: 180 SLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAE 239

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
            +   Q++  +M   G+ P +  F+ L   Y R G+ +K   +L+ M++ G+ PNVV + 
Sbjct: 240 RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYG 299

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
           ++++ +C   K+  A++I + M    + PN + Y  ++  Y E     +A  L++ M+  
Sbjct: 300 SIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN 359

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
           G+ P   T  L+           EA+ ++ S    R
Sbjct: 360 GISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 395



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 183/387 (47%), Gaps = 1/387 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   +Y  ++A + R  R    + +  ++ +  + P+ I +N MI+   + G+++   ++
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M   G KP   TYN L+ G    G+  E+  LL  M+  K V P+  TY+IL     
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMV-PDGFTYSILFDGLS 131

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                +   ++  K + +G+     T + L     + G+   AE++L  + N  + P   
Sbjct: 132 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 191

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               +++GYC+ G +E A     +MK   + P+ + +N+LI G    +        L  M
Sbjct: 192 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 251

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           ++ GV P V TF+T++DA+   G + KC  +  +M + G++P++  +  +   + + G+ 
Sbjct: 252 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 311

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +A +IL  M    V PN  ++  +I  +       +A  + EKM   GI+P++ TY  L
Sbjct: 312 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLL 371

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRP 413
           + G     Q   AEE++  +    + P
Sbjct: 372 IKGLCNQSQISEAEEIINSLSNHRLIP 398



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 168/339 (49%), Gaps = 7/339 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK   A  +   L+  G  PT + Y TL+    +    +   S   +++   +
Sbjct: 162 LNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHI 221

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD I +NA+IN   ++  +  A  +  +M+D+G  PT  T+NTLI  YG  G+ E+   
Sbjct: 222 KPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFI 281

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M Q+  +KPN  +Y  +V A+C    I EA  ++  M    + P+A  YN +  AY
Sbjct: 282 VLSEM-QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 340

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            ++G   +A  ++ +M++N + P+  T  +++ G C +  + +A   +  +    + P+ 
Sbjct: 341 VEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDA 400

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +N+LI           +DKAL L   M ++G+K  V T+  ++     AG + + + +
Sbjct: 401 VSYNTLISACC---YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYL 457

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           +  M++  + P   + +I+ + Y + G   KAE +   M
Sbjct: 458 YQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 496


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 218/447 (48%), Gaps = 43/447 (9%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            V  G+  +AH +F  ++E+G  P ++   +++  L + K      S++ K+   G+ PD
Sbjct: 220 FVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPD 279

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              ++ +I+   +S  +D+A ++ ++M ++G +P + TYN+LI GY   G   ES+++ +
Sbjct: 280 LFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 339

Query: 124 LMSQD----------------------------------KNVKPNDRTYNILVRAW--CS 147
            MS                                    K  KP+  +Y+ ++  +   +
Sbjct: 340 QMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATAT 399

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
            + + +  N+   M+  GI P+   +N L  AYA+ G   +A  +  +MQN  + P+  T
Sbjct: 400 DSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVT 459

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
              ++S  C+ G ++DA+     M ++ V P+  V+  LI+G  +  +   + KA  L+ 
Sbjct: 460 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE---LVKAKELIS 516

Query: 268 EFGVK----PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           E   K    P V  FS+I++     G + + ++I D MV+ G  P++  F+ L +GY   
Sbjct: 517 EMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLV 576

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G  ++A ++L +M   G+ PN  ++ T++ G+C   ++  A++++  M   G+ P    Y
Sbjct: 577 GNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLY 636

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKG 410
             +L G  +A++   A+++   M E G
Sbjct: 637 SIILHGLFQARRTTAAKKMFHEMIESG 663



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 205/416 (49%), Gaps = 10/416 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVA--ALTRQKRFKSILSLISKVEKD 58
           ++ L   G+ +EA  IF+ ++ +G +P +I+Y+T++   A         + ++ + +   
Sbjct: 357 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 416

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+ P+  +FN +INA +  G +D+AM IF+ M++ G  P T T+ T+I     +G+ +++
Sbjct: 417 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 476

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY-NTLA 177
           L     M  D  V P++  Y  L++  C+   + +A  ++ +M+   I P  V Y +++ 
Sbjct: 477 LHKFNHMV-DIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 535

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               + G     + ++  M     RPN  T   ++ GYC  GNME+A   L  M  + + 
Sbjct: 536 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 595

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKC 294
           PN  ++ +L+ G+     +  +D ALT+  +    GVKP  V +S I+     A      
Sbjct: 596 PNCYIYGTLVDGYC---KNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 652

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
           +++F +M+++G    IH + ++  G  R     +A  +L  +    V  +++ F  VIS 
Sbjct: 653 KKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISA 712

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
                + Q A  +++ +   G+ PN++TY  ++    + +    A+ L   +E+ G
Sbjct: 713 MFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 768



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 186/389 (47%), Gaps = 39/389 (10%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT+ TY  L+    R  R    L+++ ++ K+G+ PD   + ++I    + G VD+A  +
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 232

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F +M + G  P     N++IK    + + +++  ++Q M  D  + P+  TY++++   C
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMV-DSGIAPDLFTYSLIIDGLC 291

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
              ++++A  V+ +MV +G +P+++TYN+L   Y+  G    + ++  +M +  V P   
Sbjct: 292 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 351

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
            C   +    K G   +A                 +F+S++                   
Sbjct: 352 NCNSFIHALFKHGRTNEAK---------------CIFDSMVLK----------------- 379

Query: 267 EEFGVKPDVVTFSTIMDAWSSA--GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
              G KPD++++ST++  +++A    +     IF+ M+  GI P+ HVF+IL   Y R G
Sbjct: 380 ---GPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCG 436

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              KA  I   M+  G+ P+ V F TVIS  C   ++  A+  +  M +IG+ P+   Y 
Sbjct: 437 MMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYG 496

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            L+ G     +  +A+EL+  M  K + P
Sbjct: 497 CLIQGCCNHGELVKAKELISEMMNKDIPP 525



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/429 (21%), Positives = 194/429 (45%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           + H IFN ++ +G  P    +  L+ A  R       + +   ++  GM PD++ F  +I
Sbjct: 405 DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 464

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           ++    G +D+A+  F  M D G  P+ + Y  LI+G  N G+  ++ +L+  M      
Sbjct: 465 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIP 524

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P  + ++ ++   C +  + E  +++  MV +G +P+ VT+N+L   Y   G    A  
Sbjct: 525 PPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFA 584

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L  M +  + PN    G +V GYCK G ++DA+     M    V P  V+++ ++ G  
Sbjct: 585 LLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLF 644

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
             + +    K    M E G    + T+  ++          +   + + +    ++ DI 
Sbjct: 645 QARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII 704

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            F+I+     + G  Q+A+ +  ++  YG+ PN+  ++ +I+        + A +++  +
Sbjct: 705 TFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISV 764

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
            + G   + +    ++       +  +A   L ++ E  +  + STI L+A  +   G  
Sbjct: 765 EKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKY 824

Query: 432 REAKRVLKS 440
           RE  ++L +
Sbjct: 825 REHIKLLPA 833



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 149/325 (45%), Gaps = 6/325 (1%)

Query: 115 PEESLKLLQLMSQ---DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAV 171
           P  +++L + M +    ++  P   TYNIL+  +   +  +    +V +++ +G+ PD  
Sbjct: 153 PALAIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDF 212

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
           +Y +L   + + GE  +A  +  EM    V P    C  I+   CK   M+ A   + +M
Sbjct: 213 SY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKM 271

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
            +  + P+L  ++ +I G    K  D  ++ L  M E G +P+ +T+++++  +S +G+ 
Sbjct: 272 VDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMW 331

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            +   +F  M   G+ P +   +       + G   +A+ I  SM   G  P+++ ++T+
Sbjct: 332 NESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTM 391

Query: 352 ISGWCNAVK--MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
           + G+  A    +    +I+  M   GI PN   +  L+  Y       +A  + + M+ K
Sbjct: 392 LHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 451

Query: 410 GVRPKKSTIQLVADSWRAIGLAREA 434
           G+ P   T   V  S   IG   +A
Sbjct: 452 GMIPDTVTFATVISSLCRIGRLDDA 476



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/289 (19%), Positives = 137/289 (47%), Gaps = 1/289 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  E   I + +++ G RP ++T+ +L+         +   +L+  +   G+
Sbjct: 535 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGI 594

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+  ++  +++   ++G +D+A+ +F+ M   G KPT+  Y+ ++ G     +   + K
Sbjct: 595 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKK 654

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M +      +  TY +++   C  N  +EA  ++ K+ A  ++ D +T+N +  A 
Sbjct: 655 MFHEMIE-SGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 713

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A+++   +    + PN +T  ++++   KE + E+A      +++     + 
Sbjct: 714 FKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDS 773

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            + N +++  L+  +       L+++ E  +  +  T S +   +S  G
Sbjct: 774 RLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 822



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/313 (18%), Positives = 134/313 (42%), Gaps = 1/313 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P +  +++++  L ++ R      ++  + + G +P+ + FN+++      GN++EA  +
Sbjct: 526 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 585

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
              M   G +P    Y TL+ GY   G+ +++L + + M   K VKP    Y+I++    
Sbjct: 586 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLH-KGVKPTSVLYSIILHGLF 644

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                  A  + ++M+ SG      TY  +     +   T  A  +L ++    V+ +  
Sbjct: 645 QARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII 704

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T  I++S   K G  ++A      +    + PN+  ++ +I   +  +  +  D     +
Sbjct: 705 TFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISV 764

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           E+ G   D    + I+    +   + K       + +  +  +    S+LA  + R G+ 
Sbjct: 765 EKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKY 824

Query: 327 QKAESILTSMRKY 339
           ++   +L +  ++
Sbjct: 825 REHIKLLPAKYQF 837



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 1/136 (0%)

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P IH ++IL   Y R   P    +I+  + K G+ P+   ++ +I G+    ++ +A  +
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 232

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           + +M E G+ P +    +++    + K+  +AE ++Q M + G+ P   T  L+ D    
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 428 IGLAREAKRVLKSAEE 443
                +A+RVL+   E
Sbjct: 293 SKAMDKAERVLEQMVE 308



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 52/115 (45%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F+ +   G  P + TY+ ++  L +++ ++   +L   VEK G   DS L 
Sbjct: 717 GRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLL 776

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           N ++        V +A      + ++      ST + L   +   GK  E +KLL
Sbjct: 777 NHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 831


>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 554

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 215/426 (50%), Gaps = 10/426 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L+   +   A++ ++ +   G   +  TY+  +  L + K F  I  L+  +E    
Sbjct: 51  IGVLINHSRFDLANHYYSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNC 110

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   FN  ++     G +D A+++F+K+  +G KP   TY  +I G   + K + +++
Sbjct: 111 LPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQ 170

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG-IQPDAVTYNTLARA 179
             + M   K   P+++    +V   C    ++ A+ ++  ++ SG ++   + YN L   
Sbjct: 171 FWRDMIH-KGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISG 229

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + + G   +A+ +   M+ N   P+  T  + ++ +C E  ++DA + L  M+   + P+
Sbjct: 230 FCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPD 289

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP----DVVTFSTIMDAWSSAGLMGKCQ 295
           +  +N L+KG   I   +  DKA  LM    + P    DVV+++TI+ A+   G      
Sbjct: 290 VYSYNQLLKG---ICKGNCPDKAYLLMTN-KMWPKGLCDVVSYNTIIKAFCKIGDTTSAY 345

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           ++F++M + GI PD+  F+I  K ++  G    A+ +L  M + G+ P+ + +TT+I   
Sbjct: 346 KLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHL 405

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C + K++ A SI+  M E GI+P++ ++  L+ G+ +  +   A  L + M+ +G  P +
Sbjct: 406 CKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDE 465

Query: 416 STIQLV 421
            T +L+
Sbjct: 466 VTYKLI 471



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 191/395 (48%), Gaps = 12/395 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L  +G+   A  +F  +++ G +P ++TYT ++  + + K+F + +     +   G 
Sbjct: 121 LHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGF 180

Query: 61  KPDSILFNAMINACSESGNVDEAMK-IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
            PD+    A++    +   VD A + I   MK    K +T  YN LI G+   G+ +++ 
Sbjct: 181 SPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQ 240

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            +   M ++   +P+  TYN+ +  +C +  +++A  ++  M  SGI+PD  +YN L + 
Sbjct: 241 AIKSFMRRN-GCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKG 299

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGI-----IVSGYCKEGNMEDAMRFLYRMKEL 234
             +     +A    + +  N++ P +  C +     I+  +CK G+   A +    M + 
Sbjct: 300 ICKGNCPDKA----YLLMTNKMWP-KGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQK 354

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            + P++V F   IK FL     +   K L  M E G+ PD + ++TI+D    +G +   
Sbjct: 355 GIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMA 414

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
             IF DMV+ GI PD+  F+ L  G+ +     +A  +   M+  G +P+ V +  +I G
Sbjct: 415 HSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGG 474

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
                K+  A  ++ +M + G   +    +TL+ G
Sbjct: 475 LIEEKKISIACMVWGQMMDKGFTLDRAIAQTLIRG 509



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/303 (21%), Positives = 133/303 (43%), Gaps = 2/303 (0%)

Query: 102 YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
           Y + I GY   G  ++++++   MSQ  N +     YN  +    + +  + A +   +M
Sbjct: 12  YRSRIAGYVKAGLIDKAVQVFDEMSQ-SNCRVFSIDYNRFIGVLINHSRFDLANHYYSQM 70

Query: 162 VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM 221
              G    + TY+       +       +++L +M+     P+     I +     EG +
Sbjct: 71  GTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRI 130

Query: 222 EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
           + A+    ++ +    P++V +  +I G   IK  D   +    M   G  PD      I
Sbjct: 131 DLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAI 190

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAG-IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           +        +    E+  D++K+G ++    V++ L  G+ RAG   KA++I + MR+ G
Sbjct: 191 VVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNG 250

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
             P++V +   ++ +C+ + +  A  + + M   GI P++ +Y  LL G  +   P +A 
Sbjct: 251 CEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAY 310

Query: 401 ELL 403
            L+
Sbjct: 311 LLM 313


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 218/447 (48%), Gaps = 43/447 (9%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            V  G+  +AH +F  ++E+G  P ++   +++  L + K      S++ K+   G+ PD
Sbjct: 200 FVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPD 259

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              ++ +I+   +S  +D+A ++ ++M ++G +P + TYN+LI GY   G   ES+++ +
Sbjct: 260 LFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 319

Query: 124 LMSQD----------------------------------KNVKPNDRTYNILVRAW--CS 147
            MS                                    K  KP+  +Y+ ++  +   +
Sbjct: 320 QMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATAT 379

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
            + + +  N+   M+  GI P+   +N L  AYA+ G   +A  +  +MQN  + P+  T
Sbjct: 380 DSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVT 439

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
              ++S  C+ G ++DA+     M ++ V P+  V+  LI+G  +  +   + KA  L+ 
Sbjct: 440 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE---LVKAKELIS 496

Query: 268 EFGVK----PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           E   K    P V  FS+I++     G + + ++I D MV+ G  P++  F+ L +GY   
Sbjct: 497 EMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLV 556

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G  ++A ++L +M   G+ PN  ++ T++ G+C   ++  A++++  M   G+ P    Y
Sbjct: 557 GNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLY 616

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKG 410
             +L G  +A++   A+++   M E G
Sbjct: 617 SIILHGLFQARRTTAAKKMFHEMIESG 643



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 205/416 (49%), Gaps = 10/416 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVA--ALTRQKRFKSILSLISKVEKD 58
           ++ L   G+ +EA  IF+ ++ +G +P +I+Y+T++   A         + ++ + +   
Sbjct: 337 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 396

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+ P+  +FN +INA +  G +D+AM IF+ M++ G  P T T+ T+I     +G+ +++
Sbjct: 397 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 456

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY-NTLA 177
           L     M  D  V P++  Y  L++  C+   + +A  ++ +M+   I P  V Y +++ 
Sbjct: 457 LHKFNHMV-DIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 515

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               + G     + ++  M     RPN  T   ++ GYC  GNME+A   L  M  + + 
Sbjct: 516 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 575

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKC 294
           PN  ++ +L+ G+     +  +D ALT+  +    GVKP  V +S I+     A      
Sbjct: 576 PNCYIYGTLVDGYC---KNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 632

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
           +++F +M+++G    IH + ++  G  R     +A  +L  +    V  +++ F  VIS 
Sbjct: 633 KKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISA 692

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
                + Q A  +++ +   G+ PN++TY  ++    + +    A+ L   +E+ G
Sbjct: 693 MFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 748



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 186/389 (47%), Gaps = 39/389 (10%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT+ TY  L+    R  R    L+++ ++ K+G+ PD   + ++I    + G VD+A  +
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 212

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F +M + G  P     N++IK    + + +++  ++Q M  D  + P+  TY++++   C
Sbjct: 213 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMV-DSGIAPDLFTYSLIIDGLC 271

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
              ++++A  V+ +MV +G +P+++TYN+L   Y+  G    + ++  +M +  V P   
Sbjct: 272 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 331

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
            C   +    K G   +A                 +F+S++                   
Sbjct: 332 NCNSFIHALFKHGRTNEAK---------------CIFDSMVLK----------------- 359

Query: 267 EEFGVKPDVVTFSTIMDAWSSA--GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
              G KPD++++ST++  +++A    +     IF+ M+  GI P+ HVF+IL   Y R G
Sbjct: 360 ---GPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCG 416

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              KA  I   M+  G+ P+ V F TVIS  C   ++  A+  +  M +IG+ P+   Y 
Sbjct: 417 MMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYG 476

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            L+ G     +  +A+EL+  M  K + P
Sbjct: 477 CLIQGCCNHGELVKAKELISEMMNKDIPP 505



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/421 (21%), Positives = 190/421 (45%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           + H IFN ++ +G  P    +  L+ A  R       + +   ++  GM PD++ F  +I
Sbjct: 385 DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 444

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           ++    G +D+A+  F  M D G  P+ + Y  LI+G  N G+  ++ +L+  M      
Sbjct: 445 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIP 504

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P  + ++ ++   C +  + E  +++  MV +G +P+ VT+N+L   Y   G    A  
Sbjct: 505 PPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFA 564

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L  M +  + PN    G +V GYCK G ++DA+     M    V P  V+++ ++ G  
Sbjct: 565 LLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLF 624

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
             + +    K    M E G    + T+  ++          +   + + +    ++ DI 
Sbjct: 625 QARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII 684

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            F+I+     + G  Q+A+ +  ++  YG+ PN+  ++ +I+        + A +++  +
Sbjct: 685 TFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISV 744

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
            + G   + +    ++       +  +A   L ++ E  +  + STI L+A  +   G+ 
Sbjct: 745 EKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMI 804

Query: 432 R 432
           +
Sbjct: 805 K 805



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 76/351 (21%), Positives = 150/351 (42%), Gaps = 45/351 (12%)

Query: 115 PEESLKLLQLMSQ---DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAV 171
           P  +++L + M +    ++  P   TYNIL+  +   +  +    +V +++ +G+ PD  
Sbjct: 133 PALAIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDF 192

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
           +Y+                                    ++ G+ K+G ++ A      M
Sbjct: 193 SYS------------------------------------LIYGFVKDGEVDKAHCLFLEM 216

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
            E  V P +++ NS+IK    +K+ D  +  +  M + G+ PD+ T+S I+D    +  M
Sbjct: 217 MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAM 276

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            K + + + MV+AG  P+   ++ L  GY  +G   ++  +   M   GV P V    + 
Sbjct: 277 DKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSF 336

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE--ELLQVMEEK 409
           I       +   A  I++ M   G  P++ +Y T+L GY  A     A+   +  +M  K
Sbjct: 337 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 396

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESI 460
           G+ P K    ++ +++   G+  +A  +     ED Q+     D +   ++
Sbjct: 397 GIAPNKHVFNILINAYARCGMMDKAMLIF----EDMQNKGMIPDTVTFATV 443



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 55/291 (18%), Positives = 139/291 (47%), Gaps = 1/291 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  E   I + +++ G RP ++T+ +L+         +   +L+  +   G+
Sbjct: 515 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGI 574

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+  ++  +++   ++G +D+A+ +F+ M   G KPT+  Y+ ++ G     +   + K
Sbjct: 575 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKK 634

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M +      +  TY +++   C  N  +EA  ++ K+ A  ++ D +T+N +  A 
Sbjct: 635 MFHEMIE-SGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 693

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A+++   +    + PN +T  ++++   KE + E+A      +++     + 
Sbjct: 694 FKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDS 753

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
            + N +++  L+  +       L+++ E  +  +  T S +   +S  G++
Sbjct: 754 RLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMI 804


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 204/397 (51%), Gaps = 10/397 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G    A  +F+ L   G  P  +TY+TL++ L +  +  + L L+ ++   G++ D
Sbjct: 168 LCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQAD 227

Query: 64  SILFNAMINACSESGNVDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           ++ +NA+++ C  +G  ++AMK+++++ +D G  P  +TY  ++ G   +G+ +E+ ++ 
Sbjct: 228 AVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVW 287

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             M  + N + +  TY IL+   C    ++ A  V   MV +G+  D   YN+L + + +
Sbjct: 288 SRMMAN-NHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCE 346

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMK-ELEVHPNLV 241
            G T  A +       + +R    T  I+  G    G + +A   L +++ +    P+ V
Sbjct: 347 VGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKV 405

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
            F +LI G     ++   ++A  ++E+    G + DV ++S++++ +   G      E++
Sbjct: 406 TFGTLIHGLC---ENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVY 462

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
            +MVK G +P+ HV++ L  G+ R  +   A  I   M   G  P ++ + T+I G C A
Sbjct: 463 KNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKA 522

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
            K Q A S+ ++M E G  P+++TY +L+ G    K+
Sbjct: 523 EKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKK 559



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/406 (23%), Positives = 190/406 (46%), Gaps = 1/406 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +++ ++   H+   +TY  L+  L R     S   + S + K G+  D  ++
Sbjct: 278 GRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVY 337

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N++I    E G   EA K +     SG +  T TYN + KG  + G   E+ +LL+ +  
Sbjct: 338 NSLIKGFCEVGRTGEAWKFWDSTGFSGIRQIT-TYNIMTKGLLDSGMVSEATELLKQLEN 396

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D +  P+  T+  L+   C       A+ ++     SG + D  +Y+++   + + G T+
Sbjct: 397 DASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTH 456

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++   M  +  +PN      +++G+C+   + DA++    M      P ++ +N+LI
Sbjct: 457 DANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLI 516

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G    +           M E G KPD+ T+++++        +     I+D+++ AG++
Sbjct: 517 DGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQ 576

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
            D+ V +IL  G   AG+  +A  I   M++    PN+V + T++ G+     + +A S+
Sbjct: 577 VDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASL 636

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           +  + + G+ P++ TY T + G     +      LL  +   G+ P
Sbjct: 637 WTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMP 682



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 194/413 (46%), Gaps = 13/413 (3%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P L TY  ++ +L  +      +SL S + + G+ PD + ++ +++  ++   +D A+ +
Sbjct: 156 PNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDL 215

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M + G +     YN L+ G    G  E+++K+ + + +D    PN  TY +++   C
Sbjct: 216 LDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLC 275

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                +EA  V  +M+A+  Q D VTY  L     + G+   A ++  +M    +  +  
Sbjct: 276 KLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVS 335

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               ++ G+C+ G   +A +F +          +  +N + KG L   DS  V +A  L+
Sbjct: 336 VYNSLIKGFCEVGRTGEAWKF-WDSTGFSGIRQITTYNIMTKGLL---DSGMVSEATELL 391

Query: 267 EEF----GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           ++        PD VTF T++      G   +  EI +D   +G E D+  +S +   + +
Sbjct: 392 KQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCK 451

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G    A  +  +M K G  PN  ++  +I+G+C   K+  A+ IY +M   G  P + T
Sbjct: 452 DGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIIT 511

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           Y TL+ G  +A++   A  L + M E+G +P    I+  A   R  GL R+ K
Sbjct: 512 YNTLIDGLCKAEKYQEASSLTKEMLERGFKPD---IRTYASLIR--GLCRDKK 559



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 146/301 (48%), Gaps = 1/301 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P  +T+ TL+  L           ++      G + D   +++MIN   + G   +A ++
Sbjct: 402 PDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEV 461

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           ++ M   GCKP +  YN LI G+  V K  +++K+   M+ +    P   TYN L+   C
Sbjct: 462 YKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSN-GCCPTIITYNTLIDGLC 520

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                +EA ++  +M+  G +PD  TY +L R   +  +   A ++  E+ +  ++ +  
Sbjct: 521 KAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVM 580

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
              I++ G C  G +++A      MKE    PNLV +N+L+ GF +I   D      T +
Sbjct: 581 VHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAI 640

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            + G+KPD+VT++T +    S     +   + ++++  GI P +  +SIL +  ++ G  
Sbjct: 641 LDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPI 700

Query: 327 Q 327
           Q
Sbjct: 701 Q 701



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 158/328 (48%), Gaps = 8/328 (2%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDG-MKPDSILFNAMINACSESGNVDEAMKIF 87
           + TY  +   L           L+ ++E D    PD + F  +I+   E+G  + A +I 
Sbjct: 368 ITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEIL 427

Query: 88  QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
           +  ++SG +    +Y+++I  +   G+  ++ ++ + M +D   KPN   YN L+  +C 
Sbjct: 428 EDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKD-GCKPNSHVYNALINGFCR 486

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
            + I +A  +  +M ++G  P  +TYNTL     +  +   A  +  EM     +P+ RT
Sbjct: 487 VSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRT 546

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL-- 265
              ++ G C++  ++ A+R    + +  +  +++V N LI G      +  VD+A  +  
Sbjct: 547 YASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCS---AGKVDEAFCIYL 603

Query: 266 -MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M+E    P++VT++T+MD +   G + K   ++  ++  G++PDI  ++   KG     
Sbjct: 604 EMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCN 663

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVI 352
              +   +L  +   G+ P V+ ++ ++
Sbjct: 664 RTPEGVLLLNEVLATGIMPTVITWSILV 691



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 79/347 (22%), Positives = 161/347 (46%), Gaps = 7/347 (2%)

Query: 70  MINACSESGNVDEAMKIFQKMKDS-GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           +++A S +   D A+  F+ +    GC P   ++NTL+  +    +  ++      +S  
Sbjct: 89  VLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHG 148

Query: 129 ---KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
              + + PN +TYNI++R+ C++  ++ A ++   +   G+ PD VTY+TL    A++ +
Sbjct: 149 AFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQ 208

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM-KELEVHPNLVVFN 244
              A  +L EM N  V+ +      ++SG  + G  E AM+   ++ ++    PNL  + 
Sbjct: 209 LDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYK 268

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            ++ G   +       +  + M     + D VT+  ++     +G +     ++ DMVKA
Sbjct: 269 VMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKA 328

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+  D+ V++ L KG+   G   +A     S    G+   +  +  +  G  ++  +  A
Sbjct: 329 GLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEA 387

Query: 365 MSIYEKM-CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
             + +++  +   +P+  T+ TL+ G  E     RA E+L+     G
Sbjct: 388 TELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSG 434



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 97/176 (55%), Gaps = 1/176 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  +   ++E G +P + TY +L+  L R K+    L +  ++   G++ D ++ N
Sbjct: 524 KYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHN 583

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I+    +G VDEA  I+ +MK+  C P   TYNTL+ G+  +G  +++  L   +  D
Sbjct: 584 ILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAI-LD 642

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
             +KP+  TYN  ++  CS N   E   ++ +++A+GI P  +T++ L RA  +YG
Sbjct: 643 NGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYG 698



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/295 (21%), Positives = 136/295 (46%), Gaps = 12/295 (4%)

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN----QVRPNERTCGIIVSGYCKEGN 220
           G  P   ++NTL  A+ +      A+     + +     ++ PN +T  II+   C  G+
Sbjct: 114 GCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGD 173

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE---FGVKPDVVT 277
           ++ A+     ++   V P+ V +++L+ G   +   D +D AL L++E   +GV+ D V 
Sbjct: 174 VDRAVSLFSSLRRRGVAPDRVTYSTLMSG---LAKHDQLDNALDLLDEMPNYGVQADAVC 230

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVK-AGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           ++ ++      G+  K  ++++ +V+  G  P++  + ++  G  + G  ++A  + + M
Sbjct: 231 YNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRM 290

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
                  + V +  +I G C +  +  A  +Y  M + G+  ++  Y +L+ G+ E  + 
Sbjct: 291 MANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRT 350

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
             A +        G+R + +T  ++       G+  EA  +LK  E D    P+K
Sbjct: 351 GEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDK 404



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 5/175 (2%)

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKA-GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK- 338
           ++ A+S A +       F D+    G  P +   + L   +VRA     A++   S+   
Sbjct: 89  VLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHG 148

Query: 339 -YG--VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
            +G  + PN+  +  ++   C    + RA+S++  +   G+ P+  TY TL+ G  +  Q
Sbjct: 149 AFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQ 208

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
              A +LL  M   GV+        +       G+  +A +V +    D  + PN
Sbjct: 209 LDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPN 263


>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 214/468 (45%), Gaps = 26/468 (5%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +P + T T ++  L   K      S++  + K G++P  + F  +IN     GNV  A
Sbjct: 37  GVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAA 96

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            +    ++D G +  + T+ T+I G   VG    ++  L+       ++  +R +++L+ 
Sbjct: 97  ARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLE------KIEGRNRGFDLLIA 150

Query: 144 ------AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
                 + C    +  A N    M   GIQPD V YN+L      +G    A  +L  M 
Sbjct: 151 YSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMM 210

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
              + PN +T  ++V  +CKEG +  A   +  M  + V P++V +NS+I G   +   +
Sbjct: 211 RKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMN 270

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
              K   LM   G+ P+VVT+S+++  W     + K   + D+MV  G+  D+  +S L 
Sbjct: 271 DAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLI 330

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            G+ +AG P+ A  +  +M ++   PN+     ++ G         A+S++ KM ++ + 
Sbjct: 331 GGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLE 390

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
            N+ TY  +L G     +   A EL   +  KG++     I +VA +    GL +E   +
Sbjct: 391 LNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQ-----IDVVAYTTMIKGLCKEG--L 443

Query: 438 LKSAEEDRQSM------PNKKD-EIAVESIHRKQNLSASNSTFLQIPG 478
           L  AE+    M      PN+    + V  + ++ ++S S    + + G
Sbjct: 444 LDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKG 491



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 200/428 (46%), Gaps = 2/428 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G    A    + L + G+     T+ T++  L +       +S + K+E    
Sbjct: 84  INGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRNR 143

Query: 61  KPDSIL-FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
             D ++ ++ ++++  + G +  A+  F  M   G +P    YN+LI G  + G+  E+ 
Sbjct: 144 GFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEAT 203

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            LL  M + K + PN +T+N+LV  +C +  I  A  ++  MV  G++PD VTYN++   
Sbjct: 204 TLLGNMMR-KGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISG 262

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           +    +   A ++   M +  + PN  T   ++ G+CK  N+  A+  L  M    ++ +
Sbjct: 263 HCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLD 322

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +V +++LI GF      +   +    M E    P++ T + I+D         +   +F 
Sbjct: 323 VVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFR 382

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            M K  +E +I  ++I+  G    G+   A  + + +   G+  +VV +TT+I G C   
Sbjct: 383 KMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEG 442

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
            +  A  +  KM E G  PN  TY  L+ G  +     R+ + L +M+ KG+    +T +
Sbjct: 443 LLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTTE 502

Query: 420 LVADSWRA 427
           L+   + A
Sbjct: 503 LLISYFSA 510



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/376 (23%), Positives = 169/376 (44%), Gaps = 1/376 (0%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
           LI Y+T++ +L +       L+  S +   G++PD + +N++I+     G  +EA  +  
Sbjct: 148 LIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLG 207

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
            M   G  P   T+N L+  +   GK   +  ++  M     V+P+  TYN ++   C  
Sbjct: 208 NMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVH-VGVEPDVVTYNSVISGHCLL 266

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
           + + +A  V   M+  G+ P+ VTY++L   + +     +A  +L EM NN +  +  T 
Sbjct: 267 SQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTW 326

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             ++ G+CK G  E A+     M E    PNL     ++ G    +           ME+
Sbjct: 327 STLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEK 386

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
             ++ ++VT++ ++D   S G     +E+F  +   GI+ D+  ++ + KG  + G    
Sbjct: 387 MNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDD 446

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           AE +L  M + G  PN   +  ++ G      + R+      M   G++ +  T E L+ 
Sbjct: 447 AEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTTELLIS 506

Query: 389 GYGEAKQPWRAEELLQ 404
            +   K+    +  LQ
Sbjct: 507 YFSANKENSALQVFLQ 522



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 131/297 (44%), Gaps = 1/297 (0%)

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
           N  P D+ +  L            A +++    + G++PD  T   +         T   
Sbjct: 2   NPLPPDKDFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFG 61

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
             +L  M    V P   T   +++G C EGN+  A RF   ++++    N     ++I G
Sbjct: 62  FSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIING 121

Query: 250 FLDIKDSDGVDKALTLMEEFGVKPD-VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
              + D+ G    L  +E      D ++ +STIMD+    G++      F  M   GI+P
Sbjct: 122 LCKVGDTAGAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQP 181

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D+  ++ L  G    G   +A ++L +M + G+ PNV  F  ++  +C   K+ RA +I 
Sbjct: 182 DLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIM 241

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
             M  +G+ P++ TY +++ G+    Q   A ++ ++M  KG+ P   T   +   W
Sbjct: 242 CFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGW 298


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 107/444 (24%), Positives = 202/444 (45%), Gaps = 67/444 (15%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ LV K     A  ++N +++    P ++TY  L+  L +  + +  L L  ++   G+
Sbjct: 170 LHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGI 229

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I+++ +++   ++  + +A ++F KM+ SGC     TYN L+ G+   G  +++  
Sbjct: 230 LPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFT 289

Query: 121 LLQLMSQD----------------------------------KNVKPNDRTYNILVRAWC 146
           LLQL+++D                                  +N+KP+   Y I++R   
Sbjct: 290 LLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLS 349

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            +  + EA  ++ +M   G++PD + YN L + +   G    AE +  E+  +   PN  
Sbjct: 350 QEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNH 409

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF---------------- 250
           T  I++ G CK G +  A      M++L   P++V FNSLI G                 
Sbjct: 410 TYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM 469

Query: 251 -------LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
                  L ++ S G DK            D+ +   +M+    +G++ K  ++   +V 
Sbjct: 470 EIVRKPSLFLRLSQGTDKVF----------DIASLQVMMERLCESGMILKAYKLLMQLVD 519

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           +G+ PDI  ++IL  G+ + G    A  +   M+  G  P+ V + T+I G   A + + 
Sbjct: 520 SGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNED 579

Query: 364 AMSIYEKMCEIGINPNLKTYETLL 387
           A+ I+E+M + G  P   TY+T++
Sbjct: 580 ALEIFEQMVKKGCVPESSTYKTIM 603



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 199/426 (46%), Gaps = 25/426 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N     G   +A  +   L ++GH   +I Y  L+  L R +R++       K+ ++ +
Sbjct: 275 LNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENI 334

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD +L+  MI   S+ G V EA+ +  +M + G +P T  YN LIKG+ ++G  +E+ +
Sbjct: 335 KPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEA-E 393

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L+L     +  PN+ TY+IL+   C    I +A ++  +M   G  P  VT+N+L    
Sbjct: 394 SLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGL 453

Query: 181 AQYGETYRAEQMLFEMQNNQ-----VRPNERT--------CGIIVSGYCKEGNMEDAMRF 227
            +      A  + ++M+  +     +R ++ T          +++   C+ G +  A + 
Sbjct: 454 CKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKL 513

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
           L ++ +  V P++  +N LI GF    + +G  K    M+  G  PD VT+ T++D    
Sbjct: 514 LMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYR 573

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI-LTSMRKY-GVHPNV 345
           AG      EIF+ MVK G  P+   +  +     R      A S+ +  +R + G     
Sbjct: 574 AGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEK 633

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGI---NPNLKTYETLLWGYGEAKQPWRAEEL 402
           V    V++   +  ++Q A+    ++ E+ I   N +L  Y   L G  +AK+   A  +
Sbjct: 634 V---RVVAESFDNEELQTAI---RRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAI 687

Query: 403 LQVMEE 408
             V+++
Sbjct: 688 FSVLKD 693



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 172/362 (47%), Gaps = 1/362 (0%)

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
           K+ Q++K+S  K ++  ++ LI+ Y   G  E++++   LM +D + KP+   +N+++  
Sbjct: 114 KVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLM-RDFDCKPDLFAFNLILHF 172

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
              K +   A  V  +M+   + PD VTY  L     +  +T  A  +  EM +  + PN
Sbjct: 173 LVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPN 232

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
           +    I++SG C+   + DA R   +M+    + +L+ +N L+ GF      D     L 
Sbjct: 233 QIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQ 292

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
           L+ + G    V+ +  +++    A    +    +  M++  I+PD+ +++I+ +G  + G
Sbjct: 293 LLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEG 352

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              +A ++L  M + G+ P+ + +  +I G+C+   +  A S+  ++ +    PN  TY 
Sbjct: 353 RVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYS 412

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
            L+ G  +     +A+ + + ME+ G  P   T   + +         EA+ +    E  
Sbjct: 413 ILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIV 472

Query: 445 RQ 446
           R+
Sbjct: 473 RK 474



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/375 (22%), Positives = 182/375 (48%), Gaps = 5/375 (1%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           ++  L ++  F+    ++ +++   +K  S  F+ +I A SE+G  ++A++ F  M+D  
Sbjct: 99  IIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFD 158

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ--DKNVKPNDRTYNILVRAWCSKNSIE 152
           CKP    +N ++     + + E  L  L + +Q    N+ P+  TY IL+   C     +
Sbjct: 159 CKPDLFAFNLILHF---LVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQ 215

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           +A  +  +M   GI P+ + Y+ +     Q  + + A+++  +M+ +    +  T  +++
Sbjct: 216 DALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLL 275

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           +G+CK G ++DA   L  + +      ++ +  LI G    +  +        M    +K
Sbjct: 276 NGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIK 335

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           PDV+ ++ ++   S  G + +   +  +M + G+ PD   ++ L KG+   G   +AES+
Sbjct: 336 PDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESL 395

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              + K+   PN   ++ +I G C    + +A  I+++M ++G  P++ T+ +L+ G  +
Sbjct: 396 RLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCK 455

Query: 393 AKQPWRAEELLQVME 407
           A +   A  L   ME
Sbjct: 456 ANRLEEARLLFYQME 470



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/316 (21%), Positives = 146/316 (46%), Gaps = 9/316 (2%)

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           ++++     +N+ E  W V+ ++  S I+  +  ++ L  AY++ G   +A +    M++
Sbjct: 97  DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRD 156

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
              +P+     +I+    ++     A+    +M +  ++P++V +  LI G   +  +  
Sbjct: 157 FDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHG---LCKTCK 213

Query: 259 VDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
              AL L +E    G+ P+ + +S ++     A  +   Q +F  M  +G   D+  +++
Sbjct: 214 TQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNV 273

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  G+ ++G    A ++L  + K G    V+ +  +I+G   A + + A   Y+KM    
Sbjct: 274 LLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLREN 333

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           I P++  Y  ++ G  +  +   A  LL  M E+G+RP       +   +  +G   EA+
Sbjct: 334 IKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAE 393

Query: 436 RV-LKSAEEDRQSMPN 450
            + L+ ++ D    PN
Sbjct: 394 SLRLEISKHD--CFPN 407


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 194/368 (52%), Gaps = 1/368 (0%)

Query: 20   LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
            +++ G RP+++T  +L+    +  RF+  +SL+  ++  G  P+ +++N +IN   ++ +
Sbjct: 665  MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 724

Query: 80   VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
            ++ A+++F  M+  G +    TYNTLI G  N G+  ++ +LL+ M + K + PN   + 
Sbjct: 725  LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK-IDPNVIFFT 783

Query: 140  ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
             L+  +  + ++ EA N+  +M+   + P+  TYN+L   +  +G    A+ M   M + 
Sbjct: 784  ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 843

Query: 200  QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
               P+  T   +++G+CK   +ED M+    M    +  +   +N+LI G+      +  
Sbjct: 844  GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 903

Query: 260  DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
             K    M + GV PD+VT++ ++D   + G + K   + +D+ K+ ++ DI  ++I+ +G
Sbjct: 904  QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 963

Query: 320  YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
              R  + ++A  +  S+ + GV P+ + + T+ISG C     + A  +  +M E G  P+
Sbjct: 964  LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 1023

Query: 380  LKTYETLL 387
             + Y+  L
Sbjct: 1024 ERIYDETL 1031



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 182/383 (47%), Gaps = 1/383 (0%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
           L ++T L+    R  R    LS++ K+ K G +P  + F ++++       + +A  +  
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
            M  SG +P    YNTLI G    G+   +L+LL  M + K +  +  TYN L+   C  
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEK-KGLGADVVTYNTLLTGLCYS 224

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
               +A  ++  M+   I PD VT+  L   + + G    A+++  EM  + V PN  T 
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             I++G C  G + DA +    M      PN+V +N+LI GF   +  D   K    M  
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G   D+ T++T++  +   G +    +IF  MV   + PDI    IL  G    GE + 
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A      MR+   +  +V +  +I G C A K+++A  ++ ++   G+ P+ +TY  ++ 
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464

Query: 389 GYGEAKQPWRAEELLQVMEEKGV 411
           G  +      A+EL++ M+E+G+
Sbjct: 465 GLCKNGPRREADELIRRMKEEGI 487



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 119/491 (24%), Positives = 223/491 (45%), Gaps = 20/491 (4%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F  ++     P+++ +T L+ A    +R+++++    K+E  G+  D   F  +I
Sbjct: 54  DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +       +  A+ +  KM   G +P+  T+ +L+ G+  V +  ++  L+ LM +    
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK-SGY 172

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +PN   YN L+   C    +  A  ++ +M   G+  D VTYNTL       G    A +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           ML +M    + P+  T   ++  + K+GN+++A      M +  V PN V +NS+I G  
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                    K   LM   G  P+VVT++T++  +    ++ +  ++F  M   G   DI 
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++ L  GY + G+ + A  I   M    V P+++    ++ G C   +++ A+  ++ M
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
            E      +  Y  ++ G  +A +  +A EL   +  +GV+P   T  ++       G  
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 472

Query: 432 REAKRVLK-----------SAEEDR---QSMPNKKDEIAVESIHRKQNLSASNSTFLQ-- 475
           REA  +++           +AE+D     S  NK+  +++  I  +   S SN  ++Q  
Sbjct: 473 READELIRRMKEEGIICQMNAEDDHLEEHSSSNKEISLSLREIWER---SKSNPFWMQRL 529

Query: 476 IPGVVSSEHNG 486
           IP   SS   G
Sbjct: 530 IPIAFSSSVKG 540



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 196/442 (44%), Gaps = 36/442 (8%)

Query: 9    KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
            K  +A  +F  +++    P+++ +T ++  + +  +F  ++ L  K+E  G+  D   F 
Sbjct: 584  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 69   AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
             +I+       +  A+ +  KM   G +P+  T  +L+ G+    + +E++ L+  M   
Sbjct: 644  ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 129  KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG---- 184
              V PN   YN ++   C    +  A  V Y M   GI+ DAVTYNTL    +  G    
Sbjct: 704  GFV-PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 762

Query: 185  ------------------------ETYRAEQMLFEMQN-------NQVRPNERTCGIIVS 213
                                    +T+  E  L E +N         V PN  T   +++
Sbjct: 763  AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 822

Query: 214  GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
            G+C  G + DA      M      P++V +N+LI GF   K  +   K    M   G+  
Sbjct: 823  GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 882

Query: 274  DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
            D  T++T++  +  AG +   Q++F+ MV  G+ PDI  ++IL       G+ +KA  ++
Sbjct: 883  DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 942

Query: 334  TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
              ++K  +  +++ +  +I G C   K++ A  ++  +   G+ P+   Y T++ G    
Sbjct: 943  EDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 1002

Query: 394  KQPWRAEELLQVMEEKGVRPKK 415
                 A++L + M+E G  P +
Sbjct: 1003 GLQREADKLCRRMKEDGFMPSE 1024



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 148/306 (48%), Gaps = 7/306 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+ + A  + N + ++G    ++TY TL+  L    R+     ++  + K  + PD
Sbjct: 186 LCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPD 245

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + F A+I+   + GN+DEA +++++M  S   P   TYN++I G    G+  ++ K   
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           LM+  K   PN  TYN L+  +C    ++E   +  +M   G   D  TYNTL   Y Q 
Sbjct: 306 LMAS-KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQV 364

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A  +   M + +V P+  T  I++ G C  G +E A+     M+E E +  +V +
Sbjct: 365 GKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAY 424

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N +I G   +  +D V+KA  L       GVKPD  T++ ++      G   +  E+   
Sbjct: 425 NIMIHG---LCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRR 481

Query: 301 MVKAGI 306
           M + GI
Sbjct: 482 MKEEGI 487



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/333 (23%), Positives = 158/333 (47%), Gaps = 1/333 (0%)

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           ++A  +F +M  S   P+   +  L+    N+ + E  +   Q M +   +  +  ++ I
Sbjct: 53  EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKM-ELYGISHDLYSFTI 111

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+  +C  + +  A +V+ KM+  G +P  VT+ +L   +        A  ++  M  + 
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
             PN      ++ G CK G +  A+  L  M++  +  ++V +N+L+ G           
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           + L  M +  + PDVVTF+ ++D +   G + + QE++ +M+++ ++P+   ++ +  G 
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
              G    A+     M   G  PNVV + T+ISG+C    +   M ++++M   G N ++
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            TY TL+ GY +  +   A ++   M  + V P
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTP 384



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 81/393 (20%), Positives = 182/393 (46%), Gaps = 1/393 (0%)

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           D+A  +F +M  S   P+   +  ++     + K +  + L   M ++  +  +  ++ I
Sbjct: 586 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKM-ENLGISHDLYSFTI 644

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+  +C  + +  A  ++ KM+  G +P  VT  +L   + Q      A  ++  M    
Sbjct: 645 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 704

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
             PN      +++G CK  ++ +A+   Y M++  +  + V +N+LI G  +        
Sbjct: 705 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 764

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           + L  M +  + P+V+ F+ ++D +   G + + + ++ +M++  + P++  ++ L  G+
Sbjct: 765 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 824

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
              G    A+ +   M   G  P+VV + T+I+G+C + +++  M ++ +M   G+  + 
Sbjct: 825 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 884

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            TY TL+ GY +A +   A+++   M + GV P   T  ++ D     G   +A  +++ 
Sbjct: 885 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 944

Query: 441 AEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF 473
            ++    +      I ++ + R   L  +   F
Sbjct: 945 LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLF 977



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 107/195 (54%), Gaps = 1/195 (0%)

Query: 12   EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
            +A Y+F+ ++ +G  P ++TY TL+    + KR +  + L  ++   G+  D+  +N +I
Sbjct: 832  DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 891

Query: 72   NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
            +   ++G ++ A K+F +M D G  P   TYN L+    N GK E++L +++ + Q   +
Sbjct: 892  HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL-QKSEM 950

Query: 132  KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
              +  TYNI+++  C  + ++EAW +   +   G++PDA+ Y T+     + G    A++
Sbjct: 951  DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 1010

Query: 192  MLFEMQNNQVRPNER 206
            +   M+ +   P+ER
Sbjct: 1011 LCRRMKEDGFMPSER 1025



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 135/308 (43%), Gaps = 37/308 (12%)

Query: 16   IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
            +F C+ ++G R   +TY TL++ L+   R+     L+  + K  + P+ I F A+I+   
Sbjct: 731  VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 790

Query: 76   ESGNVDEAMKIFQKM-----------------------------------KDSGCKPTTS 100
            + GN+ EA  ++++M                                      GC P   
Sbjct: 791  KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 850

Query: 101  TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
            TYNTLI G+    + E+ +KL   M+  + +  +  TYN L+  +C    +  A  V  +
Sbjct: 851  TYNTLITGFCKSKRVEDGMKLFCEMTY-QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 909

Query: 161  MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
            MV  G+ PD VTYN L       G+  +A  M+ ++Q +++  +  T  II+ G C+   
Sbjct: 910  MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 969

Query: 221  MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS- 279
            +++A      +    V P+ + + ++I G          DK    M+E G  P    +  
Sbjct: 970  LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 1029

Query: 280  TIMDAWSS 287
            T+ D ++S
Sbjct: 1030 TLRDHYTS 1037



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/469 (22%), Positives = 189/469 (40%), Gaps = 70/469 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++ V +G   EA  ++  +I+    P  +TY +++  L    R          +   G 
Sbjct: 253 IDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGC 312

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +N +I+   +   VDE MK+FQ+M   G      TYNTLI GY  VGK   +L 
Sbjct: 313 FPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALD 372

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M   + V P+  T+ IL+   C    IE A      M  S      V YN +    
Sbjct: 373 IFCWMVS-RRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL 431

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE------- 233
            +  +  +A ++   +    V+P+ RT  I++ G CK G   +A   + RMKE       
Sbjct: 432 CKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQM 491

Query: 234 ------LEVHPNL---------------------------VVFNSLIKGFLDIKDSDGVD 260
                 LE H +                            + F+S +KGF+         
Sbjct: 492 NAEDDHLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIPIAFSSSVKGFV--------- 542

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE----------------IFDDMVKA 304
           +   L+ E G  P+    +++  ++S A      +E                +F +M+++
Sbjct: 543 RRHYLLLERGNNPE----TSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQS 598

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
              P I  F+ +     +  +      +   M   G+  ++  FT +I  +C   ++  A
Sbjct: 599 RPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLA 658

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           +++  KM ++G  P++ T  +LL G+ +  +   A  L+  M+  G  P
Sbjct: 659 LALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 707



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 138/292 (47%), Gaps = 6/292 (2%)

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF---EMQNNQVRPNERT 207
            E+A+ + ++MV S   P  V +  L  A A      R E +++   +M+   +  +  +
Sbjct: 52  FEDAFALFFEMVHSQPLPSIVDFTRLLTATAN---LRRYETVIYFSQKMELYGISHDLYS 108

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
             I++  +C+   +  A+  L +M +L   P++V F SL+ GF  +         + LM 
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
           + G +P+VV ++T++D     G +    E+ ++M K G+  D+  ++ L  G   +G   
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            A  +L  M K  ++P+VV FT +I  +     +  A  +Y++M +  ++PN  TY +++
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            G     + + A++   +M  KG  P   T   +   +    +  E  ++ +
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 113/248 (45%), Gaps = 1/248 (0%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            ++  V +G   EA  ++  +I     P + TY +L+              +   +   G 
Sbjct: 786  IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 845

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             PD + +N +I    +S  V++ MK+F +M   G      TYNTLI GY   GK   + K
Sbjct: 846  FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 905

Query: 121  LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            +   M  D  V P+  TYNIL+   C+   IE+A  +V  +  S +  D +TYN + +  
Sbjct: 906  VFNRMV-DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 964

Query: 181  AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
             +  +   A  +   +    V+P+      ++SG C++G   +A +   RMKE    P+ 
Sbjct: 965  CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 1024

Query: 241  VVFNSLIK 248
             +++  ++
Sbjct: 1025 RIYDETLR 1032



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 116/274 (42%), Gaps = 24/274 (8%)

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           + P+ +     ARA++ Y E  R                        +G+      EDA 
Sbjct: 21  VNPNLLGGGAAARAFSDYREKLR------------------------TGFLHSIRFEDAF 56

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
              + M   +  P++V F  L+    +++  + V      ME +G+  D+ +F+ ++  +
Sbjct: 57  ALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCF 116

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
                +     +   M+K G EP I  F  L  G+        A S++  M K G  PNV
Sbjct: 117 CRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNV 176

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
           V++ T+I G C   ++  A+ +  +M + G+  ++ TY TLL G   + +   A  +L+ 
Sbjct: 177 VVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRD 236

Query: 406 MEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           M ++ + P   T   + D +   G   EA+ + K
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYK 270



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 52/109 (47%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            ++ L   GK  +A  +   L +      +ITY  ++  L R  + K    L   + + G+
Sbjct: 926  LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 985

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY 109
            KPD+I +  MI+     G   EA K+ ++MK+ G  P+   Y+  ++ +
Sbjct: 986  KPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 1034


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 201/405 (49%), Gaps = 7/405 (1%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +   + + G  P+++T+TT+V  L  +      +  +  ++  G + D     A+IN   
Sbjct: 83  VLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLC 142

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G+   A+   +KM++  C    + Y+ ++ G    G   E+L L   M+  K ++PN 
Sbjct: 143 KVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMT-GKGIQPNL 201

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TYN L+   C+ +  +EA  ++  M+  GI PD  T+N +A  + + G   RA+ +   
Sbjct: 202 FTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSF 261

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M +  +  N  T   I+  +C    M+DAM     M      PN+V +NSLI G+ + K+
Sbjct: 262 MGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKN 321

Query: 256 SDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
              ++KA+  + E    G+ PDVVT+ST++  +  AG     +E+F  M K G  PD+  
Sbjct: 322 ---MNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQT 378

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
            +I+  G  +     +A S+   + K     ++++++ +++G C++ K+  A+ ++  + 
Sbjct: 379 CAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLS 438

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             G+  ++ TY  ++ G  +      AE+LL  MEE G  P + T
Sbjct: 439 SKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECT 483



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 106/455 (23%), Positives = 203/455 (44%), Gaps = 1/455 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +P + T+  ++  L R        S++  + K G++P  + F  ++N     GNV +A
Sbjct: 56  GVKPNVSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQA 115

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           ++    +KD G +    T   +I G   VG    +L  L+ M +++N   +   Y+ +V 
Sbjct: 116 IRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKM-EEQNCNLDVTAYSAVVD 174

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C    + EA ++  +M   GIQP+  TYN L      +     A  +L  M    + P
Sbjct: 175 GLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMP 234

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           + +T  +I   + K G +  A      M  + +  N+V +NS+I     +       +  
Sbjct: 235 DVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVF 294

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            LM   G  P++VT+++++  W     M K      +MV  G++PD+  +S L  G+ +A
Sbjct: 295 DLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKA 354

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+P  A+ +   M K+G  P++     ++ G         AMS++ ++ ++  + ++  Y
Sbjct: 355 GKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIY 414

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             +L G   + +   A EL   +  KGV+    T  ++ +     GL  +A+ +L   EE
Sbjct: 415 SIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEE 474

Query: 444 DRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPG 478
           +          + V+ + R+  +S S    + + G
Sbjct: 475 NGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKG 509



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 198/427 (46%), Gaps = 1/427 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G   +A    + L + G+     T   ++  L +     + LS + K+E+   
Sbjct: 103 VNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNC 162

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D   ++A+++   + G V EA+ +F +M   G +P   TYN LI G  N  + +E+  
Sbjct: 163 NLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAP 222

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M + K + P+ +T+N++   +     I  A ++   M   GI+ + VTYN++  A+
Sbjct: 223 LLANMMR-KGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAH 281

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
               +   A ++   M      PN  T   ++ G+C+  NM  AM FL  M    + P++
Sbjct: 282 CMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDV 341

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +++LI GF          +   +M + G  PD+ T + I+D         +   +F +
Sbjct: 342 VTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRE 401

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           + K   + DI ++SI+  G   +G+   A  + + +   GV  +VV +  +I+G C    
Sbjct: 402 LEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGL 461

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  +  KM E G  P+  TY   + G     +  ++ + L  M+ KG R   +T +L
Sbjct: 462 LDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKL 521

Query: 421 VADSWRA 427
           + + + A
Sbjct: 522 LINYFSA 528



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 172/386 (44%), Gaps = 3/386 (0%)

Query: 60  MKPDSIL--FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
           MKP   +  FN +    ++  +   A+ + + M   G KP  ST+N +I     +     
Sbjct: 20  MKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVINCLCRLNHTVF 79

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
              +L LM +   V+P+  T+  +V   C + ++ +A   V  +   G + D  T   + 
Sbjct: 80  GFSVLGLMFK-IGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAII 138

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               + G +  A   L +M+      +      +V G CK+G + +A+    +M    + 
Sbjct: 139 NGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQ 198

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           PNL  +N LI G  +          L  M   G+ PDV TF+ I   +   G++ + + I
Sbjct: 199 PNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSI 258

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F  M   GIE ++  ++ +   +    + + A  +   M + G  PN+V + ++I GWC 
Sbjct: 259 FSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCE 318

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              M +AM    +M   G++P++ T+ TL+ G+ +A +P  A+EL  VM + G  P   T
Sbjct: 319 TKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQT 378

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEE 443
             ++ D         EA  + +  E+
Sbjct: 379 CAIILDGLFKCHFHSEAMSLFRELEK 404



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/408 (24%), Positives = 182/408 (44%), Gaps = 40/408 (9%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA  +F+ +  +G +P L TY  L+  L    R+K    L++ + + G+ PD
Sbjct: 176 LCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPD 235

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              FN +     ++G +  A  IF  M   G +    TYN++I  +  + + ++++++  
Sbjct: 236 VQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFD 295

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           LM + K   PN  TYN L+  WC   ++ +A   + +MV +G+ PD VT++TL   + + 
Sbjct: 296 LMIR-KGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKA 354

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A+++ F M  +   P+ +TC II+ G  K     +AM     ++++         
Sbjct: 355 GKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKM--------- 405

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
                      +SD                D++ +S I++   S+G +    E+F  +  
Sbjct: 406 -----------NSD---------------LDIIIYSIILNGMCSSGKLNDALELFSYLSS 439

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G++ D+  ++I+  G  + G    AE +L  M + G  P+   +   + G     ++ +
Sbjct: 440 KGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISK 499

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           +      M   G   N  T + LL  Y  A +  RA    QV  +K V
Sbjct: 500 STKYLMFMKGKGFRANATTTK-LLINYFSANKENRA---FQVFLQKFV 543



 Score = 45.1 bits (105), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 37/183 (20%), Positives = 72/183 (39%)

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           + +  MV     P +  F++L     +      A S++  M   GV PNV     VI+  
Sbjct: 12  DFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVINCL 71

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C         S+   M +IG+ P++ T+ T++ G        +A   +  +++ G    +
Sbjct: 72  CRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDR 131

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQ 475
            T   + +    +G +  A   LK  EE   ++        V+ + +   +  +   F Q
Sbjct: 132 YTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQ 191

Query: 476 IPG 478
           + G
Sbjct: 192 MTG 194


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 206/440 (46%), Gaps = 1/440 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  EA  +F      G     + YTTL+  L +     +      ++    M
Sbjct: 491 VNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD++++N  IN     G   EA     +M++ G KP  STYNT+I  +   G+  ++LK
Sbjct: 551 LPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M    ++KPN  TYN LV       ++E+A  ++ +MV++G  P ++T+  + +A 
Sbjct: 611 LLHEMKM-SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQAC 669

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           +Q         +   M N  +  +      ++   C  G    A   L  M    + P+ 
Sbjct: 670 SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDT 729

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + FN+LI G       D        M    + P++ TF+T++    S G +G+   +  +
Sbjct: 730 ITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE 789

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M K+G+EP+   + ILA G+ +     +A  +   M   G  P V  +  +IS +  A  
Sbjct: 790 MEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGM 849

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M +A  +++ M + G++P   TY+ L+ G+   +     ++ L+ M+EKG  P K T+  
Sbjct: 850 MTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSF 909

Query: 421 VADSWRAIGLAREAKRVLKS 440
           +  ++   G+  +A+R+LK+
Sbjct: 910 ICRAFSKPGMTWQAQRLLKN 929



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 211/461 (45%), Gaps = 44/461 (9%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E G  P ++TY TL+    + +   + L +   +  +G+K +  + ++++N   ++G ++
Sbjct: 442 ERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIE 501

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           EAM +F+    SG       Y TLI G    G    + K  Q +  D+N+ P+   YN+ 
Sbjct: 502 EAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQEL-MDRNMLPDAVVYNVF 560

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +   C     +EA + + +M   G++PD  TYNT+  ++ + GET +A ++L EM+ + +
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRM----------------------KELEV--- 236
           +PN  T   +V+G    G +E A   L  M                      + L+V   
Sbjct: 621 KPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILD 680

Query: 237 ----------HPNLVVFNSLIKGFLDIKDSDGVD-KALTLMEEF---GVKPDVVTFSTIM 282
                     H ++ V+N+L    L +    G+  KA  ++EE    G+ PD +TF+ ++
Sbjct: 681 IHEWMMNAGLHADITVYNTL----LQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALI 736

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
                +  +      +  M+   I P+I  F+ L  G    G   +A ++L  M K G+ 
Sbjct: 737 LGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLE 796

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           PN + +  + +G         AM +Y +M   G  P + TY  L+  + +A    +A+EL
Sbjct: 797 PNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL 856

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            + M+++GV P   T  ++   W  I    E K+ LK  +E
Sbjct: 857 FKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKE 897



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 204/460 (44%), Gaps = 42/460 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L  +GK  E        + +   P  +TYT L+ AL +         ++ ++E+  +
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI 410

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + F+++IN   + G +D+A +  + MK+ G  P   TY TLI G+      + +L+
Sbjct: 411 SPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALE 470

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ------------- 167
           +   M  +  VK N    + LV        IEEA  +      SG+              
Sbjct: 471 VYHDMLCE-GVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGL 529

Query: 168 ----------------------PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                                 PDAV YN         G+   A+  L EM+N  ++P++
Sbjct: 530 FKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQ 589

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   ++  +C++G    A++ L+ MK   + PNL+ +N+L+ G      +  V+KA  L
Sbjct: 590 STYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLF---GTGAVEKAKYL 646

Query: 266 MEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           + E    G  P  +T   ++ A S +  +    +I + M+ AG+  DI V++ L +    
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G  +KA  +L  M   G+ P+ + F  +I G C +  +  A + Y +M    I+PN+ T
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
           + TLL G     +   A  +L  ME+ G+ P   T  ++A
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILA 806



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 193/445 (43%), Gaps = 36/445 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+   A  + + + E G  P + TYT  +    R K  +    L   + ++G+  D +  
Sbjct: 218 GQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTL 277

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +A++      G   EA  +F++M   G  P   TY TLI      G+ +E L LL  M  
Sbjct: 278 SALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVS 337

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + V  +  TY  L+     +   +E  + +   ++  + P+ VTY  L  A  +     
Sbjct: 338 -RGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD 396

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            AEQ+L EM+   + PN  T   +++G+ K G ++ A  +   MKE  ++PN+V + +LI
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 248 KGFLDIKDSDG--------------------------------VDKALTLMEEF---GVK 272
            GF   +  D                                 +++A+ L ++    G+ 
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            D V ++T++D    AG M    +   +++   + PD  V+++        G+ ++A+S 
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSF 576

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           LT MR  G+ P+   + T+I   C   +  +A+ +  +M    I PNL TY TL+ G   
Sbjct: 577 LTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFG 636

Query: 393 AKQPWRAEELLQVMEEKGVRPKKST 417
                +A+ LL  M   G  P   T
Sbjct: 637 TGAVEKAKYLLNEMVSAGFSPSSLT 661



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 198/448 (44%), Gaps = 19/448 (4%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           RPT + Y  L+AAL+      ++L+   ++ K G+  D +  N ++     +G VD A  
Sbjct: 100 RPTTVAYNILLAALSDHAHAPAVLA---EMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156

Query: 86  IFQKMKDSGCKPTTSTYNTL----IKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
                +  G  P  S+  TL    I G+G+      +L +   M+  + +  +   YN L
Sbjct: 157 --LADRAGGITPWMSSAGTLSLLDIAGFGDT---PAALSVADRMTA-QGLPMDVVGYNTL 210

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           V  +C    ++ A  V+  M  +G+ P+  TY      Y +      A  +   M  N V
Sbjct: 211 VAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGV 270

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
             +  T   +V+G C++G   +A      M ++   PN V + +LI           +  
Sbjct: 271 LLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLS 330

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM---VKAGIEPDIHVFSILAK 318
            L  M   GV  D+VT++ +MD W   G  GK  E+ D +   +   + P+   +++L  
Sbjct: 331 LLGEMVSRGVVMDLVTYTALMD-W--LGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLID 387

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
              +A    +AE +L  M +  + PNVV F++VI+G+     + +A      M E GINP
Sbjct: 388 ALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINP 447

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           N+ TY TL+ G+ + +    A E+   M  +GV+  K  +  + +  R  G   EA  + 
Sbjct: 448 NVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALF 507

Query: 439 KSAEEDRQSMPNKKDEIAVESIHRKQNL 466
           K A     S+ +      ++ + +  ++
Sbjct: 508 KDASGSGLSLDHVNYTTLIDGLFKAGDM 535



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 1/300 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G G   +A Y+ N ++  G  P+ +T+  ++ A ++ +R   IL +   +   G+  D
Sbjct: 634 LFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHAD 693

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             ++N ++      G   +A  + ++M  SG  P T T+N LI G+      + +     
Sbjct: 694 ITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYA 753

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   +N+ PN  T+N L+    S   I EA  V+ +M  SG++P+ +TY+ LA  + + 
Sbjct: 754 QMLH-QNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQ 812

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                A ++  EM      P   T   ++S + K G M  A      M++  VHP    +
Sbjct: 813 SNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTY 872

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           + L+ G+  I++   V K L  M+E G  P   T S I  A+S  G+  + Q +  ++ +
Sbjct: 873 DILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYR 932



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 144/326 (44%), Gaps = 13/326 (3%)

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           ++ +P    YNIL+ A         A  V+ +M   G+  D VT NTL     + G+   
Sbjct: 97  RSSRPTTVAYNILLAALSDH---AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDA 153

Query: 189 AEQMLFEMQNNQVRPNERTCGII----VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           A  +    +   + P   + G +    ++G+   G+   A+    RM    +  ++V +N
Sbjct: 154 AAAL--ADRAGGITPWMSSAGTLSLLDIAGF---GDTPAALSVADRMTAQGLPMDVVGYN 208

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +L+ GF      D     L +M+E GV P+V T++  +  +     + +  ++++ MV+ 
Sbjct: 209 TLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRN 268

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+  D+   S L  G  R G   +A ++   M K G  PN V + T+I     A + +  
Sbjct: 269 GVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKEL 328

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           +S+  +M   G+  +L TY  L+   G+  +    ++ L+      + P   T  ++ D+
Sbjct: 329 LSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDA 388

Query: 425 WRAIGLAREAKRVLKSAEEDRQSMPN 450
                   EA++VL   EE   S PN
Sbjct: 389 LCKAHNVDEAEQVLLEMEEKSIS-PN 413



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 137/313 (43%), Gaps = 10/313 (3%)

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR 226
           +P  V YN L  A + +     A  +L EM    V  +  T   +++G C+ G ++ A  
Sbjct: 100 RPTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMD 283
              R     + P +    +L    LDI        AL++ +     G+  DVV ++T++ 
Sbjct: 157 LADRAGG--ITPWMSSAGTL--SLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVA 212

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
            +  AG +   + + D M +AG++P++  ++     Y R    ++A  +   M + GV  
Sbjct: 213 GFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLL 272

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           +VV  + +++G C   +   A +++ +M ++G  PN  TY TL+    +A +      LL
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRK 463
             M  +GV     T   + D     G   E K  L+ A  D  S       + ++++ + 
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKA 392

Query: 464 QNLSASNSTFLQI 476
            N+  +    L++
Sbjct: 393 HNVDEAEQVLLEM 405


>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
          Length = 586

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 189/425 (44%), Gaps = 3/425 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKD-GMKPDSILFNAMINACSESGNVDEAMK 85
           P+  +   ++  L R  R    L L  ++    G  PD+   + ++++C+ +  +D +  
Sbjct: 145 PSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASAT 204

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +  K  + GC+     YN L+      G+  + + L +   QD+   P+  ++N++++  
Sbjct: 205 LLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGV 264

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV-RPN 204
           C    +++A  +V +M   G  PD VT+N +     +  E  R  ++L  +Q + V  PN
Sbjct: 265 CRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPN 324

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   ++SGYCK G +EDAM     M    + PN V +N LI G+  + D     +   
Sbjct: 325 VVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQ 384

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M      PDVVTFS+++D +   G +     I+ DM +  I+P+++ FSI+     +  
Sbjct: 385 QMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQN 444

Query: 325 EPQKAESILTSMR-KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
              +A  +L  +  +  + P   ++  VI   C   K+  A  I + M E G  P+  TY
Sbjct: 445 RSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTY 504

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             L+ GY    +   A      M E G  P   T+          G+  E   V++ A  
Sbjct: 505 TILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVMRLASG 564

Query: 444 DRQSM 448
              S+
Sbjct: 565 GASSI 569



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 160/337 (47%), Gaps = 8/337 (2%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM-KPDSILFNAMINACSESGNV 80
           E G R     Y  L+++L  + R   +++L  +  +D +  PD   FN +I      G V
Sbjct: 211 EFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQV 270

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
            +A+++ ++M + GC P T T+N ++ G     +     ++L+ + +D    PN  T+  
Sbjct: 271 QKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTS 330

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           ++  +C    +E+A  V   MVASGI P+ VTYN L   Y + G+   A ++  +M   +
Sbjct: 331 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 390

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
             P+  T   ++ GYC+ G ++DA+R    M +  + PN+  F+ +I        S   D
Sbjct: 391 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRS---D 447

Query: 261 KALTLMEEFGVKPDVV----TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           +A+ L+ E  ++PD+      ++ ++D     G + +   I   M + G  PD + ++IL
Sbjct: 448 EAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTIL 507

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
             GY       +A      M + G  P+ +     IS
Sbjct: 508 IIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFIS 544



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 113/283 (39%), Gaps = 38/283 (13%)

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRM-KELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           + P+  +C  I+   C+ G   DA++   +M       P+    + L+         D  
Sbjct: 143 ITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDAS 202

Query: 260 DKALTLMEEFGVK------------------------------------PDVVTFSTIMD 283
              L+   EFG +                                    PDV +F+ ++ 
Sbjct: 203 ATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIK 262

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV-H 342
                G + K  E+ + M + G  PD    +I+  G  R  E  +   +L  +++ GV  
Sbjct: 263 GVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCM 322

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           PNVV FT+VISG+C A K++ AM++Y  M   GI PN  TY  L+ GYG+      A E+
Sbjct: 323 PNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEV 382

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
            Q M      P   T   + D +   G   +A R+     + R
Sbjct: 383 YQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHR 425



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 3/89 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L   GK  EA+ I   + E+G RP   TYT L+     + R    +    ++ + G 
Sbjct: 473 IDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGC 532

Query: 61  KPDSILFNAMINACSESG---NVDEAMKI 86
            PDSI  N  I+   ++G    VD  M++
Sbjct: 533 SPDSITVNCFISCLLKAGMPNEVDHVMRL 561


>gi|77556780|gb|ABA99576.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 696

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 192/390 (49%), Gaps = 36/390 (9%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G++P + ++NA+I A   +G VD A   FQ+M   GC+P   TYN+L+ G    G  +E+
Sbjct: 183 GLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEA 242

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           ++L++ M + + ++PN  TY +LV  +C+   +EEA+ ++ KM   G+ P   TY TL  
Sbjct: 243 VRLVRQM-EGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVH 301

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM------- 231
              +  E  +A +ML +   ++   +   C  ++    K+   ++A+ F  RM       
Sbjct: 302 GVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFEKRMSARGYLL 361

Query: 232 -------------KELEV---------------HPNLVVFNSLIKGFLDIKDSDGVDKAL 263
                        K LEV               +P   V+  +IK  L+ K+    +  L
Sbjct: 362 DSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYL 421

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M   G+   V++++ ++D +  AG + K +EI  +M   G  P++  F+ L  GY + 
Sbjct: 422 GHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKL 481

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G    A+ +L  + ++G  P+++ FT++I G CN  ++  A   +E+M E G+ PN +TY
Sbjct: 482 GNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTY 541

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             L+     A    +A +LL  M+  GV P
Sbjct: 542 NVLMHTLCSAGHVNKAIDLLNKMKIDGVTP 571



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/442 (21%), Positives = 199/442 (45%), Gaps = 38/442 (8%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           V  G    A+  F  +  +G RP   TY +LV  + R+      + L+ ++E +G++P+ 
Sbjct: 199 VRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNV 258

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-Q 123
             +  +++    +G V+EA ++  KMK+ G  P+ +TY TL+ G     + +++ ++L  
Sbjct: 259 FTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSD 318

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT-------- 175
            +  + ++ P+    + ++     K+  +EA     +M A G   D+  +          
Sbjct: 319 WLGHETSLHPS--ACHTMLYCLSKKDMAKEAVEFEKRMSARGYLLDSTAFGIVMSCALKC 376

Query: 176 --------LARAYAQYG-----ETY--------------RAEQMLFEMQNNQVRPNERTC 208
                   L  ++ + G     + Y              +A   L  M    +  +  + 
Sbjct: 377 LEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSY 436

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
            +++  + K G ++ A   +  M++    PNLV FN+LI G+  + +       L ++ E
Sbjct: 437 NMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLME 496

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G  PD++TF++++D   +   +      F++M + G+ P+   +++L      AG   K
Sbjct: 497 HGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNK 556

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  +L  M+  GV P+   F  +I  +C   K+ +A  I+  M   G+ P+  TY +L+ 
Sbjct: 557 AIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIK 616

Query: 389 GYGEAKQPWRAEELLQVMEEKG 410
              + ++  +A+E+L   E  G
Sbjct: 617 ALCDERRVNKAKEILFARERSG 638



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 113/225 (50%), Gaps = 2/225 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++  V  G   +A  I   + ++G  P L+T+ TL++  ++     +   ++  + + G 
Sbjct: 440 IDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGF 499

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I F ++I+    +  +D+A   F++M + G +P   TYN L+    + G   +++ 
Sbjct: 500 MPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAID 559

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M  D  V P+  ++N L+ ++C    +++A ++   MV  G+ PD+ TYN+L +A 
Sbjct: 560 LLNKMKID-GVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKAL 618

Query: 181 AQYGETYRAEQMLFEMQNNQVR-PNERTCGIIVSGYCKEGNMEDA 224
                  +A+++LF  + +     N ++   IV+   K G   +A
Sbjct: 619 CDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFSEA 663



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/335 (22%), Positives = 132/335 (39%), Gaps = 37/335 (11%)

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           LV +W        A  V  +M   G++P    YN L  A  + G    A     +M  + 
Sbjct: 159 LVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADG 218

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
            RP+  T   +V G C+ G +++A+R + +M+   + PN+  +  L+ GF +    +   
Sbjct: 219 CRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAF 278

Query: 261 KALTLMEEFGVKPDVVTFSTIMDA----------------W---------SSAGLMGKCQ 295
           + L  M+E GV P   T+ T++                  W         S+   M  C 
Sbjct: 279 RMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCL 338

Query: 296 EIFDDMVKAGIE-----------PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
               DM K  +E            D   F I+    ++  E      +L S  K G +P 
Sbjct: 339 SK-KDMAKEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPG 397

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
             ++  VI    N     +A      M   G+  ++ +Y  ++  + +A    +AEE+++
Sbjct: 398 FDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVK 457

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            M++KG  P   T   +   +  +G    AK VLK
Sbjct: 458 EMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLK 492



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 73/156 (46%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A   F  + E G RP   TY  L+  L         + L++K++ DG+ PD+  FNA+I
Sbjct: 521 DAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALI 580

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
            +      VD+A  IF  M   G  P + TYN+LIK   +  +  ++ ++L    +    
Sbjct: 581 LSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSGCS 640

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ 167
             N+++Y  +V A        EA  ++ K ++   Q
Sbjct: 641 TSNNQSYWPIVAALAKMGQFSEAGELMDKYLSRNAQ 676



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/311 (18%), Positives = 119/311 (38%), Gaps = 36/311 (11%)

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
            L  ++ + G    A ++  +M    +RP+      +++   + G ++ A     +M   
Sbjct: 158 ALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPAD 217

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
              P+   +NSL+ G       D   + +  ME  G++P+V T++ ++D + +AG + + 
Sbjct: 218 GCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEA 277

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM--RKYGVHPNV------- 345
             + D M + G+ P    +  L  G  R  E  KA  +L+     +  +HP+        
Sbjct: 278 FRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYC 337

Query: 346 --------------------------VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
                                       F  V+S     +++     + +   + G NP 
Sbjct: 338 LSKKDMAKEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPG 397

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
              Y  ++      K   +A   L  M  KG+     +  +V D +   G   +A+ ++K
Sbjct: 398 FDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVK 457

Query: 440 SAEEDRQSMPN 450
              +D+  +PN
Sbjct: 458 EM-QDKGFLPN 467


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 206/440 (46%), Gaps = 1/440 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  EA  +F      G     + YTTL+  L +     +      ++    M
Sbjct: 491 VNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD++++N  IN     G   EA     +M++ G KP  STYNT+I  +   G+  ++LK
Sbjct: 551 LPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M    ++KPN  TYN LV       ++E+A  ++ +MV++G  P ++T+  + +A 
Sbjct: 611 LLHEMKM-SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQAC 669

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           +Q         +   M N  +  +      ++   C  G    A   L  M    + P+ 
Sbjct: 670 SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDT 729

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + FN+LI G       D        M    + P++ TF+T++    S G +G+   +  +
Sbjct: 730 ITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE 789

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M K+G+EP+   + ILA G+ +     +A  +   M   G  P V  +  +IS +  A  
Sbjct: 790 MEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGM 849

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M +A  +++ M + G++P   TY+ L+ G+   +     ++ L+ M+EKG  P K T+  
Sbjct: 850 MTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSF 909

Query: 421 VADSWRAIGLAREAKRVLKS 440
           +  ++   G+  +A+R+LK+
Sbjct: 910 ICRAFSKPGMTWQAQRLLKN 929



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 211/461 (45%), Gaps = 44/461 (9%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E G  P ++TY TL+    + +   + L +   +  +G+K +  + ++++N   ++G ++
Sbjct: 442 ERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIE 501

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           EAM +F+    SG       Y TLI G    G    + K  Q +  D+N+ P+   YN+ 
Sbjct: 502 EAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQEL-MDRNMLPDAVVYNVF 560

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +   C     +EA + + +M   G++PD  TYNT+  ++ + GET +A ++L EM+ + +
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRM----------------------KELEV--- 236
           +PN  T   +V+G    G +E A   L  M                      + L+V   
Sbjct: 621 KPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILD 680

Query: 237 ----------HPNLVVFNSLIKGFLDIKDSDGVD-KALTLMEEF---GVKPDVVTFSTIM 282
                     H ++ V+N+L    L +    G+  KA  ++EE    G+ PD +TF+ ++
Sbjct: 681 IHEWMMNAGLHADITVYNTL----LQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALI 736

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
                +  +      +  M+   I P+I  F+ L  G    G   +A ++L  M K G+ 
Sbjct: 737 LGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLE 796

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           PN + +  + +G         AM +Y +M   G  P + TY  L+  + +A    +A+EL
Sbjct: 797 PNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL 856

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            + M+++GV P   T  ++   W  I    E K+ LK  +E
Sbjct: 857 FKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKE 897



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 204/460 (44%), Gaps = 42/460 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L  +GK  E        + +   P  +TYT L+ AL +         ++ ++E+  +
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI 410

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + F+++IN   + G +D+A +  + MK+ G  P   TY TLI G+      + +L+
Sbjct: 411 SPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALE 470

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ------------- 167
           +   M  +  VK N    + LV        IEEA  +      SG+              
Sbjct: 471 VYHDMLCE-GVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGL 529

Query: 168 ----------------------PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                                 PDAV YN         G+   A+  L EM+N  ++P++
Sbjct: 530 FKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQ 589

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   ++  +C++G    A++ L+ MK   + PNL+ +N+L+ G      +  V+KA  L
Sbjct: 590 STYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLF---GTGAVEKAKYL 646

Query: 266 MEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           + E    G  P  +T   ++ A S +  +    +I + M+ AG+  DI V++ L +    
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G  +KA  +L  M   G+ P+ + F  +I G C +  +  A + Y +M    I+PN+ T
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
           + TLL G     +   A  +L  ME+ G+ P   T  ++A
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILA 806



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 193/445 (43%), Gaps = 36/445 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+   A  + + + E G  P + TYT  +    R K  +    L   + ++G+  D +  
Sbjct: 218 GQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTL 277

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +A++      G   EA  +F++M   G  P   TY TLI      G+ +E L LL  M  
Sbjct: 278 SALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVS 337

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + V  +  TY  L+     +   +E  + +   ++  + P+ VTY  L  A  +     
Sbjct: 338 -RGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD 396

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            AEQ+L EM+   + PN  T   +++G+ K G ++ A  +   MKE  ++PN+V + +LI
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 248 KGFLDIKDSDG--------------------------------VDKALTLMEEF---GVK 272
            GF   +  D                                 +++A+ L ++    G+ 
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            D V ++T++D    AG M    +   +++   + PD  V+++        G+ ++A+S 
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSF 576

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           LT MR  G+ P+   + T+I   C   +  +A+ +  +M    I PNL TY TL+ G   
Sbjct: 577 LTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFG 636

Query: 393 AKQPWRAEELLQVMEEKGVRPKKST 417
                +A+ LL  M   G  P   T
Sbjct: 637 TGAVEKAKYLLNEMVSAGFSPSSLT 661



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 197/444 (44%), Gaps = 11/444 (2%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           RPT + Y  L+AAL+      ++L+   ++ K G+  D +  N ++     +G VD A  
Sbjct: 100 RPTTVAYNILLAALSDHAHAPAVLA---EMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +  +            +NTLI GY  VG    +L +   M+  + +  +   YN LV  +
Sbjct: 157 LADRGGGIHALDVIG-WNTLIAGYCRVGDTPAALSVADRMTA-QGLPMDVVGYNTLVAGF 214

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C    ++ A  V+  M  +G+ P+  TY      Y +      A  +   M  N V  + 
Sbjct: 215 CRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDV 274

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   +V+G C++G   +A      M ++   PN V + +LI           +   L  
Sbjct: 275 VTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGE 334

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM---VKAGIEPDIHVFSILAKGYVR 322
           M   GV  D+VT++ +MD W   G  GK  E+ D +   +   + P+   +++L     +
Sbjct: 335 MVSRGVVMDLVTYTALMD-W--LGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCK 391

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           A    +AE +L  M +  + PNVV F++VI+G+     + +A      M E GINPN+ T
Sbjct: 392 AHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVT 451

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           Y TL+ G+ + +    A E+   M  +GV+  K  +  + +  R  G   EA  + K A 
Sbjct: 452 YGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDAS 511

Query: 443 EDRQSMPNKKDEIAVESIHRKQNL 466
               S+ +      ++ + +  ++
Sbjct: 512 GSGLSLDHVNYTTLIDGLFKAGDM 535



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/485 (22%), Positives = 201/485 (41%), Gaps = 73/485 (15%)

Query: 25  HRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAM 84
           H   +I + TL+A   R     + LS+  ++   G+  D + +N ++     +G VD A 
Sbjct: 165 HALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAAR 224

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
            +   MK++G  P  +TY   I  Y      EE+  L + M ++  V  +  T + LV  
Sbjct: 225 GVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRN-GVLLDVVTLSALVAG 283

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE------------------- 185
            C      EA+ +  +M   G  P+ VTY TL  + A+ G                    
Sbjct: 284 LCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMD 343

Query: 186 --TYRA---------------EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
             TY A               + + F + +N + PN  T  +++   CK  N+++A + L
Sbjct: 344 LVTYTALMDWLGKQGKTDEVKDTLRFALSDN-LSPNGVTYTVLIDALCKAHNVDEAEQVL 402

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
             M+E  + PN+V F+S+I GF+     D   +   +M+E G+ P+VVT+ T++D +   
Sbjct: 403 LEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
                  E++ DM+  G++ +  +   L  G  + G+ ++A ++       G+  + V +
Sbjct: 463 QGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522

Query: 349 TTVISG-----------------------------------WCNAVKMQRAMSIYEKMCE 373
           TT+I G                                    C   K + A S   +M  
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRN 582

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
           +G+ P+  TY T++  +    +  +A +LL  M+   ++P   T   +       G   +
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642

Query: 434 AKRVL 438
           AK +L
Sbjct: 643 AKYLL 647



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 1/300 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G G   +A Y+ N ++  G  P+ +T+  ++ A ++ +R   IL +   +   G+  D
Sbjct: 634 LFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHAD 693

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             ++N ++      G   +A  + ++M  SG  P T T+N LI G+      + +     
Sbjct: 694 ITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYA 753

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   +N+ PN  T+N L+    S   I EA  V+ +M  SG++P+ +TY+ LA  + + 
Sbjct: 754 QMLH-QNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQ 812

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                A ++  EM      P   T   ++S + K G M  A      M++  VHP    +
Sbjct: 813 SNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTY 872

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           + L+ G+  I++   V K L  M+E G  P   T S I  A+S  G+  + Q +  ++ +
Sbjct: 873 DILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYR 932



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 145/332 (43%), Gaps = 25/332 (7%)

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           ++ +P    YNIL+ A         A  V+ +M   G+  D VT NTL     + G+   
Sbjct: 97  RSSRPTTVAYNILLAALSDH---AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDA 153

Query: 189 AEQMLFEMQNNQVRPNERTCGI----------IVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           A  +            +R  GI          +++GYC+ G+   A+    RM    +  
Sbjct: 154 AAAL-----------ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPM 202

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           ++V +N+L+ GF      D     L +M+E GV P+V T++  +  +     + +  +++
Sbjct: 203 DVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLY 262

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           + MV+ G+  D+   S L  G  R G   +A ++   M K G  PN V + T+I     A
Sbjct: 263 EGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKA 322

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            + +  +S+  +M   G+  +L TY  L+   G+  +    ++ L+      + P   T 
Sbjct: 323 GRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTY 382

Query: 419 QLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            ++ D+        EA++VL   EE   S PN
Sbjct: 383 TVLIDALCKAHNVDEAEQVLLEMEEKSIS-PN 413



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 139/310 (44%), Gaps = 4/310 (1%)

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR 226
           +P  V YN L  A + +     A  +L EM    V  +  T   +++G C+ G ++ A  
Sbjct: 100 RPTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
              R   +    +++ +N+LI G+  + D+         M   G+  DVV ++T++  + 
Sbjct: 157 LADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFC 215

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
            AG +   + + D M +AG++P++  ++     Y R    ++A  +   M + GV  +VV
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVV 275

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
             + +++G C   +   A +++ +M ++G  PN  TY TL+    +A +      LL  M
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNL 466
             +GV     T   + D     G   E K  L+ A  D  S       + ++++ +  N+
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNV 395

Query: 467 SASNSTFLQI 476
             +    L++
Sbjct: 396 DEAEQVLLEM 405


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 202/407 (49%), Gaps = 1/407 (0%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           F  +I    RP+ +     + ++ ++K++ +++SL ++++  G+  +    N +IN+   
Sbjct: 74  FYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCR 133

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
             ++  A+ +  KM   G +P + T+ TLI G  N G+ +E+++L   M+  ++  PN  
Sbjct: 134 LSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMA-GRDAMPNTV 192

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           T+ ILV   C K  + EA  V   M   G++P+  TYN L   Y    E   A ++   M
Sbjct: 193 TFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIM 252

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
                 P+  +  I+++GYCK   +++A   L +M E E+ PN V +N+L++G       
Sbjct: 253 VGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSL 312

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
               +    M   G+ P++ T+S ++D     G + +  ++   M +  +EPDI +++IL
Sbjct: 313 LEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNIL 372

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
            +G   AG+ + A+ + + +   G+ P+V  +  +I G         A  ++ KM + G 
Sbjct: 373 IQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGF 432

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
            P+  +Y  ++ G+ + + P  A +L+  M  +      ST +++ D
Sbjct: 433 LPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 178/340 (52%), Gaps = 5/340 (1%)

Query: 1   MNILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
           +NIL+         H A  + + + + G +P  +T+TTL+  L  + R K  + L +++ 
Sbjct: 124 LNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMA 183

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
                P+++ F  +++   + G V EA  +F+ M + G +P   TYN L+ GY    +  
Sbjct: 184 GRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMN 243

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           ++ K+ ++M   K   P+  +Y+IL+  +C    I+EA  ++ +M    + P+ VTYNTL
Sbjct: 244 DASKVFEIMV-GKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTL 302

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
            +          A+++  +M ++ + PN RT  I++ G CK G++E+A++ L  M+E ++
Sbjct: 303 MQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKL 362

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P++V++N LI+G       +   +  + +   G++P V T++ ++      GL  +  +
Sbjct: 363 EPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYK 422

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           +F  M   G  PD   ++++ +G+++  +P  A  ++  M
Sbjct: 423 LFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEM 462



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 184/383 (48%), Gaps = 40/383 (10%)

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK--NVKPNDRT 137
           +D+AM  F +M     +P+   +  L K  G++ K ++   ++ L +Q     V  ND T
Sbjct: 67  IDDAMASFYRMIHMNPRPS---FVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYT 123

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
            NIL+ + C  + I  A +V+ KM   GIQPD+VT+ TL       G    A ++  EM 
Sbjct: 124 LNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMA 183

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF---LDIK 254
                PN  T  I+V   CK+G + +A      M E  V PN+  +N+L+ G+   L++ 
Sbjct: 184 GRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMN 243

Query: 255 DSDGV-----------------------------DKA---LTLMEEFGVKPDVVTFSTIM 282
           D+  V                             D+A   LT M E  + P+ VT++T+M
Sbjct: 244 DASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLM 303

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
                A  + + QE+F  M  +G+ P++  +SIL  G  + G  ++A  +LTSM++  + 
Sbjct: 304 QGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLE 363

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           P++V++  +I G   A K++ A  ++ K+   GI P+++TY  ++ G  +      A +L
Sbjct: 364 PDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKL 423

Query: 403 LQVMEEKGVRPKKSTIQLVADSW 425
            + ME+ G  P   +  ++   +
Sbjct: 424 FRKMEDDGFLPDSCSYNVIIQGF 446



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 153/316 (48%), Gaps = 1/316 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  EA  +FN +      P  +T+T LV  L ++        +   + + G+
Sbjct: 163 INGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGV 222

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+   +NA++N       +++A K+F+ M   GC P+  +Y+ LI GY    + +E+  
Sbjct: 223 EPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKA 282

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  MS+ K + PN  TYN L++  C  +S+ EA  +  KM +SG+ P+  TY+ L    
Sbjct: 283 LLTQMSE-KELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGL 341

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            ++G    A ++L  MQ  ++ P+     I++ G    G +E A     ++    + P++
Sbjct: 342 CKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSV 401

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +N +IKG L    SD   K    ME+ G  PD  +++ I+  +          ++ D+
Sbjct: 402 RTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDE 461

Query: 301 MVKAGIEPDIHVFSIL 316
           MV      D   F +L
Sbjct: 462 MVGRRFSADSSTFKML 477



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 131/249 (52%), Gaps = 5/249 (2%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           ++A  +F  ++ +G  P++ +Y+ L+    + +R     +L++++ +  + P+++ +N +
Sbjct: 243 NDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTL 302

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           +     + ++ EA ++F+KM  SG  P   TY+ L+ G    G  EE+LKLL  M Q++ 
Sbjct: 303 MQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSM-QERK 361

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           ++P+   YNIL++       +E A  +  K+ A+GI+P   TYN + +   + G +  A 
Sbjct: 362 LEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAY 421

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           ++  +M+++   P+  +  +I+ G+ +  +   A++ +  M    V       +S  K  
Sbjct: 422 KLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEM----VGRRFSADSSTFKML 477

Query: 251 LDIKDSDGV 259
           LD++  D +
Sbjct: 478 LDLESHDEI 486



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 102/242 (42%), Gaps = 1/242 (0%)

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
           G  VS    +  ++DAM   YRM  +   P+ V     +      K    V      M+ 
Sbjct: 55  GGFVSNNSNDIGIDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDL 114

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
           FGV  +  T + ++++      +     +   M K GI+PD   F+ L  G    G  ++
Sbjct: 115 FGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKE 174

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  +   M      PN V FT ++   C    +  A  ++E M E G+ PN+ TY  L+ 
Sbjct: 175 AVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMN 234

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSM 448
           GY    +   A ++ ++M  KG  P   +  ++ + +       EAK +L    E ++ +
Sbjct: 235 GYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSE-KELI 293

Query: 449 PN 450
           PN
Sbjct: 294 PN 295



 Score = 45.4 bits (106), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 47/99 (47%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK   A  +F+ L   G RP++ TY  ++  L ++        L  K+E DG  PDS  +
Sbjct: 380 GKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSY 439

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLI 106
           N +I    ++ +   A+++  +M        +ST+  L+
Sbjct: 440 NVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/416 (24%), Positives = 198/416 (47%), Gaps = 1/416 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P L T + L+     Q       S+ + + K G  P++I  N +I      G + +A
Sbjct: 87  GITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKA 146

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +    ++   G +    +Y TLI G    G+ +   +LL+ + +  +VKP+   YN ++ 
Sbjct: 147 LYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKL-EGHSVKPDVVMYNTIIN 205

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C    + +A +V  +M+  GI PD VTY TL   +   G    A  +L EM+   + P
Sbjct: 206 SLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINP 265

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  T  I++    KEG M++A   L  M +  + P++  +NSLI G+  + +        
Sbjct: 266 NVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVF 325

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M + GV PDV  ++ +++      ++ +   +F++M    + PDI  ++ L  G  + 
Sbjct: 326 YSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKN 385

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
              ++A ++   M++ G+ P+V  +T ++ G C + +++ A  I++++   G + N+  Y
Sbjct: 386 HHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAY 445

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             L+    +A     A +L   ME+KG  P   T  ++  +        +A+++L+
Sbjct: 446 TVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILR 501



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 196/376 (52%), Gaps = 7/376 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  +A Y  + L+ +G +   ++Y TL+  L +    K++  L+ K+E   +KPD
Sbjct: 137 LCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPD 196

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++N +IN+  ++  + +A  ++ +M   G  P   TY TLI G+  +G  +E+  LL 
Sbjct: 197 VVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLN 256

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   KN+ PN  T+NIL+ A   +  ++EA  ++  M+ + I+PD  TYN+L   Y   
Sbjct: 257 EMKL-KNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLV 315

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E   A+ + + M    V P+ +    +++G CK   +++AM     MK   + P++V +
Sbjct: 316 DEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTY 375

Query: 244 NSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           NSLI G   +  +  +++A+ L   M+E G++PDV +++ ++D    +G +   +EIF  
Sbjct: 376 NSLIDG---LCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQR 432

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           ++  G   ++H +++L     +AG   +A  + + M   G  P+ V F  +I       +
Sbjct: 433 LLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDE 492

Query: 361 MQRAMSIYEKMCEIGI 376
             +A  I  +M   G+
Sbjct: 493 NDKAEKILREMIARGL 508



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 201/426 (47%), Gaps = 42/426 (9%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           FN ++     P    +  ++++L   K + +++SL  + E +G+ PD    + +IN    
Sbjct: 45  FNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCH 104

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
             ++  A  +F               N L +G+                       PN  
Sbjct: 105 QAHITLAFSVFA--------------NILKRGF----------------------HPNAI 128

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           T N L++  C +  I++A     ++VA G Q D V+Y TL     + GET    ++L ++
Sbjct: 129 TLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKL 188

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
           + + V+P+      I++  CK   + DA      M    + P++V + +LI GF  +   
Sbjct: 189 EGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGH- 247

Query: 257 DGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
             + +A +L+ E  +K   P+V TF+ ++DA S  G M + + +   M+KA I+PD+  +
Sbjct: 248 --LKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTY 305

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           + L  GY    E + A+ +  SM + GV P+V  +T +I+G C    +  AMS++E+M  
Sbjct: 306 NSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKH 365

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
             + P++ TY +L+ G  +     RA  L + M+E+G++P   +  ++ D     G   +
Sbjct: 366 KNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLED 425

Query: 434 AKRVLK 439
           AK + +
Sbjct: 426 AKEIFQ 431



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 116/280 (41%), Gaps = 35/280 (12%)

Query: 164 SGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED 223
           +GI PD  T + L   +        A  +   +      PN  T   ++ G C  G ++ 
Sbjct: 86  NGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKK 145

Query: 224 AMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD 283
           A+ F  ++       + V + +LI G     ++  V + L  +E   VKPDVV ++TI++
Sbjct: 146 ALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIN 205

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
           +     L+G   +++ +M+  GI PD                                  
Sbjct: 206 SLCKNKLLGDACDVYSEMIVKGISPD---------------------------------- 231

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
            VV +TT+I G+C    ++ A S+  +M    INPN+ T+  L+    +  +   A+ LL
Sbjct: 232 -VVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILL 290

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            VM +  ++P   T   + D +  +   + AK V  S  +
Sbjct: 291 AVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQ 330



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 107/235 (45%), Gaps = 5/235 (2%)

Query: 1   MNILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
            NIL+     +GK  EA  +   +++   +P + TY +L+         K    +   + 
Sbjct: 270 FNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMA 329

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           + G+ PD   +  MIN   ++  VDEAM +F++MK     P   TYN+LI G       E
Sbjct: 330 QRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLE 389

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
            ++ L + M +++ ++P+  +Y IL+   C    +E+A  +  +++A G   +   Y  L
Sbjct: 390 RAIALCKRM-KEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVL 448

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
                + G    A  +  +M++    P+  T  II+    ++   + A + L  M
Sbjct: 449 INRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREM 503


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 194/368 (52%), Gaps = 1/368 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G RP+++T  +L+    +  RF+  +SL+  ++  G  P+ +++N +IN   ++ +
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           ++ A+++F  M+  G +    TYNTLI G  N G+  ++ +LL+ M + K + PN   + 
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK-IDPNVIFFT 258

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+  +  + ++ EA N+  +M+   + P+  TYN+L   +  +G    A+ M   M + 
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+  T   +++G+CK   +ED M+    M    +  +   +N+LI G+      +  
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            K    M + GV PD+VT++ ++D   + G + K   + +D+ K+ ++ DI  ++I+ +G
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             R  + ++A  +  S+ + GV P+ + + T+ISG C     + A  +  +M E G  P+
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498

Query: 380 LKTYETLL 387
            + Y+  L
Sbjct: 499 ERIYDETL 506



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 196/442 (44%), Gaps = 36/442 (8%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  +A  +F  +++    P+++ +T ++  + +  +F  ++ L  K+E  G+  D   F 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I+       +  A+ +  KM   G +P+  T  +L+ G+    + +E++ L+  M   
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG---- 184
             V PN   YN ++   C    +  A  V Y M   GI+ DAVTYNTL    +  G    
Sbjct: 179 GFV-PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237

Query: 185 ------------------------ETYRAEQMLFEMQN-------NQVRPNERTCGIIVS 213
                                   +T+  E  L E +N         V PN  T   +++
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
           G+C  G + DA      M      P++V +N+LI GF   K  +   K    M   G+  
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           D  T++T++  +  AG +   Q++F+ MV  G+ PDI  ++IL       G+ +KA  ++
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             ++K  +  +++ +  +I G C   K++ A  ++  +   G+ P+   Y T++ G    
Sbjct: 418 EDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 477

Query: 394 KQPWRAEELLQVMEEKGVRPKK 415
                A++L + M+E G  P +
Sbjct: 478 GLQREADKLCRRMKEDGFMPSE 499



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 75/343 (21%), Positives = 165/343 (48%), Gaps = 1/343 (0%)

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           D+A  +F +M  S   P+   +  ++     + K +  + L   M ++  +  +  ++ I
Sbjct: 61  DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKM-ENLGISHDLYSFTI 119

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+  +C  + +  A  ++ KM+  G +P  VT  +L   + Q      A  ++  M    
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
             PN      +++G CK  ++ +A+   Y M++  +  + V +N+LI G  +        
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           + L  M +  + P+V+ F+ ++D +   G + + + ++ +M++  + P++  ++ L  G+
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
              G    A+ +   M   G  P+VV + T+I+G+C + +++  M ++ +M   G+  + 
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
            TY TL+ GY +A +   A+++   M + GV P   T  ++ D
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLD 402



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 107/195 (54%), Gaps = 1/195 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A Y+F+ ++ +G  P ++TY TL+    + KR +  + L  ++   G+  D+  +N +I
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   ++G ++ A K+F +M D G  P   TYN L+    N GK E++L +++ + Q   +
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL-QKSEM 425

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
             +  TYNI+++  C  + ++EAW +   +   G++PDA+ Y T+     + G    A++
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485

Query: 192 MLFEMQNNQVRPNER 206
           +   M+ +   P+ER
Sbjct: 486 LCRRMKEDGFMPSER 500



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 135/308 (43%), Gaps = 37/308 (12%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F C+ ++G R   +TY TL++ L+   R+     L+  + K  + P+ I F A+I+   
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 265

Query: 76  ESGNVDEAMKIFQKM-----------------------------------KDSGCKPTTS 100
           + GN+ EA  ++++M                                      GC P   
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 325

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
           TYNTLI G+    + E+ +KL   M+  + +  +  TYN L+  +C    +  A  V  +
Sbjct: 326 TYNTLITGFCKSKRVEDGMKLFCEMTY-QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           MV  G+ PD VTYN L       G+  +A  M+ ++Q +++  +  T  II+ G C+   
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS- 279
           +++A      +    V P+ + + ++I G          DK    M+E G  P    +  
Sbjct: 445 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 504

Query: 280 TIMDAWSS 287
           T+ D ++S
Sbjct: 505 TLRDHYTS 512



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 113/248 (45%), Gaps = 1/248 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++  V +G   EA  ++  +I     P + TY +L+              +   +   G 
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + +N +I    +S  V++ MK+F +M   G      TYNTLI GY   GK   + K
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 380

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M  D  V P+  TYNIL+   C+   IE+A  +V  +  S +  D +TYN + +  
Sbjct: 381 VFNRMV-DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +   A  +   +    V+P+      ++SG C++G   +A +   RMKE    P+ 
Sbjct: 440 CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499

Query: 241 VVFNSLIK 248
            +++  ++
Sbjct: 500 RIYDETLR 507



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 52/109 (47%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   GK  +A  +   L +      +ITY  ++  L R  + K    L   + + G+
Sbjct: 401 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY 109
           KPD+I +  MI+     G   EA K+ ++MK+ G  P+   Y+  ++ +
Sbjct: 461 KPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 509


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 126/486 (25%), Positives = 214/486 (44%), Gaps = 62/486 (12%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI-------- 71
           +I EG  P+ + + +LV A  R   +     L+ K+   G +P  +++N +I        
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 72  ---------------------------NACSES------GNVDEAMKIFQKMKDSGCKPT 98
                                      N C+ +      G  ++A  + ++M   G  P 
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 99  TSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVV 158
           +STY+ +I    N  K E++ +L Q M ++  + P+  TY  L+  +C    IE+A N  
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRN-GITPDVYTYTTLLDRFCKVGLIEQARNWF 180

Query: 159 YKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
            +M   G  P+ VTY  L  AY +  +  RA ++   M +N   PN  T   ++ G+CK 
Sbjct: 181 DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKA 240

Query: 219 GNMEDAMRFLYRMKELEV-----------------HPNLVVFNSLIKGFLDIKDSDGVDK 261
           G  E A +   RMK  +V                  PN+V + +L+ G            
Sbjct: 241 GETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARD 300

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            L  M   G +P+ + +  ++D +   G + + QE+F  M+  G  P+++ +S L     
Sbjct: 301 LLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLF 360

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           +      A  +LT M +    PNVV++T ++ G C   K   A  +   M E G  PN+ 
Sbjct: 361 KDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVV 420

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY  ++ G+G+A +  R  ELLQ+M  KG  P   T +++ +   A GL  +A ++L   
Sbjct: 421 TYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLL--- 477

Query: 442 EEDRQS 447
           EE +Q+
Sbjct: 478 EEMKQT 483



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/421 (24%), Positives = 202/421 (47%), Gaps = 21/421 (4%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L    K  +A  +F  +   G  P + TYTTL+    +    +   +   ++++DG  P+
Sbjct: 132 LCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPN 191

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + + A+I+A  ++  +  A +IF+ M  +GC P   TY  LI G+   G+ E++ ++  
Sbjct: 192 VVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYA 251

Query: 124 LMSQDK----NV------------KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ 167
            M  DK    +V            +PN  TY  LV   C  + ++EA +++  M   G +
Sbjct: 252 RMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCE 311

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
           P+ + Y+ L   + + G+   A+++  +M  +   PN  T   ++    K+  ++ A++ 
Sbjct: 312 PNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKV 371

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
           L +M E    PN+V++  ++ G   +  +D   + + +MEE G  P+VVT++ ++D +  
Sbjct: 372 LTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGK 431

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
           AG + +C E+   M   G  P+   + +L      AG    A  +L  M++     ++ M
Sbjct: 432 AGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGM 491

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           +  VI G+ +  +   ++ +  ++ E G  P L  Y+ L+  + +A    R E  L++ E
Sbjct: 492 YRKVIEGFSH--EFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAG---RLEMALELHE 546

Query: 408 E 408
           E
Sbjct: 547 E 547



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/403 (23%), Positives = 185/403 (45%), Gaps = 23/403 (5%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A+ +   ++ +G  P   TY+ ++  L    + +    L  +++++G+ PD   +
Sbjct: 101 GKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTY 160

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +++   + G +++A   F +M+  GC P   TY  LI  Y    K   + ++ ++M  
Sbjct: 161 TTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLS 220

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ-PDAVTYNTLARAYAQYGET 186
           +  V PN  TY  L+   C     E+A  +  +M    +  PD   Y             
Sbjct: 221 NGCV-PNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIY------------- 266

Query: 187 YRAEQMLFEMQNNQVR-PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
                  F + +++++ PN  T G +V G CK   +++A   L  M      PN +++++
Sbjct: 267 -------FRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDA 319

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           LI GF  +   D   +  T M   G  P+V T+S+++D       +    ++   M++  
Sbjct: 320 LIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENS 379

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
             P++ +++ +  G  + G+  +A  ++  M + G +PNVV +T +I G+  A ++ R +
Sbjct: 380 CAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCL 439

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
            + + M   G  PN  TY  L+     A     A +LL+ M++
Sbjct: 440 ELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQ 482



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 86/358 (24%), Positives = 165/358 (46%), Gaps = 33/358 (9%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           F  +  E   P ++TY  LV  L +  + K    L+  +  +G +P+ I+++A+I+   +
Sbjct: 267 FRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCK 326

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
            G +DEA ++F KM   GC P   TY++LI       + + +LK+L  M ++ +  PN  
Sbjct: 327 VGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLEN-SCAPNVV 385

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
            Y  +V   C     +EA+ ++  M   G  P+ VTY  +   + + G   R  ++L  M
Sbjct: 386 IYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLM 445

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF------ 250
            +    PN  T  ++++  C  G ++DA + L  MK+     ++ ++  +I+GF      
Sbjct: 446 TSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVA 505

Query: 251 ----LDIKDSDG--------------------VDKALTLMEEFGVKPDVV--TFSTIMDA 284
               L     DG                    ++ AL L EE          T+ +++++
Sbjct: 506 SLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQNTYVSLIES 565

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
            + A  + K  +++ DM + G  P++ +   L KG +R G+ ++A  +  S+ +  +H
Sbjct: 566 LTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSICQMDIH 623



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 6/246 (2%)

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD------KALT 264
           +V  YC+ G+   A + L +M      P  VV+N LI G    +D   ++      +A  
Sbjct: 17  LVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIGLAERAYN 76

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M E GV  + V            G   K   +  +M+  G  PD   +S +      A 
Sbjct: 77  EMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNAS 136

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           + +KA  +   M++ G+ P+V  +TT++  +C    +++A + +++M + G  PN+ TY 
Sbjct: 137 KVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYT 196

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
            L+  Y + ++  RA E+ ++M   G  P   T   + D     G   +A ++    + D
Sbjct: 197 ALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKND 256

Query: 445 RQSMPN 450
           +  +P+
Sbjct: 257 KVDIPD 262


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/444 (24%), Positives = 202/444 (45%), Gaps = 67/444 (15%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ LV K     A  ++N +++    P ++TY  L+  L +  + +  L L  ++   G+
Sbjct: 170 LHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGI 229

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I+++ +++   ++  + +A ++F KM+ SGC     TYN L+ G+   G  +++  
Sbjct: 230 LPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFT 289

Query: 121 LLQLMSQD----------------------------------KNVKPNDRTYNILVRAWC 146
           LLQL+++D                                  +N+KP+   Y I++R   
Sbjct: 290 LLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLS 349

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            +  + EA  ++ +M   G++PD + YN L + +   G    AE +  E+  +   PN  
Sbjct: 350 QEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNH 409

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF---------------- 250
           T  I++ G CK G +  A      M++L   P++V FNSLI G                 
Sbjct: 410 TYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM 469

Query: 251 -------LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
                  L ++ S G DK            D+ +   +M+    +G++ K  ++   +V 
Sbjct: 470 EIVRKPSLFLRLSQGTDKVF----------DIASLQVMMERLCESGMILKAYKLLMQLVD 519

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           +G+ PDI  ++IL  G+ + G    A  +   M+  G  P+ V + T+I G   A + + 
Sbjct: 520 SGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNED 579

Query: 364 AMSIYEKMCEIGINPNLKTYETLL 387
           A+ I+E+M + G  P   TY+T++
Sbjct: 580 ALEIFEQMVKKGCVPESSTYKTIM 603



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 199/426 (46%), Gaps = 25/426 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N     G   +A  +   L ++GH   +I Y  L+  L R +R++       K+ ++ +
Sbjct: 275 LNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENI 334

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD +L+  MI   S+ G V EA+ +  +M + G +P T  YN LIKG+ ++G  +E+ +
Sbjct: 335 KPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEA-E 393

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L+L     +  PN+ TY+IL+   C    I +A ++  +M   G  P  VT+N+L    
Sbjct: 394 SLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGL 453

Query: 181 AQYGETYRAEQMLFEMQNNQ-----VRPNERT--------CGIIVSGYCKEGNMEDAMRF 227
            +      A  + ++M+  +     +R ++ T          +++   C+ G +  A + 
Sbjct: 454 CKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKL 513

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
           L ++ +  V P++  +N LI GF    + +G  K    M+  G  PD VT+ T++D    
Sbjct: 514 LMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYR 573

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI-LTSMRKY-GVHPNV 345
           AG      EIF+ MVK G  P+   +  +     R      A S+ +  +R + G     
Sbjct: 574 AGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEK 633

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGI---NPNLKTYETLLWGYGEAKQPWRAEEL 402
           V    V++   +  ++Q A+    ++ E+ I   N +L  Y   L G  +AK+   A  +
Sbjct: 634 V---RVVAESFDNEELQTAI---RRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAI 687

Query: 403 LQVMEE 408
             V+++
Sbjct: 688 FSVLKD 693



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 172/362 (47%), Gaps = 1/362 (0%)

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
           K+ Q++K+S  K ++  ++ LI+ Y   G  E++++   LM +D + KP+   +N+++  
Sbjct: 114 KVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLM-RDFDCKPDLFAFNLILHF 172

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
              K +   A  V  +M+   + PD VTY  L     +  +T  A  +  EM +  + PN
Sbjct: 173 LVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPN 232

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
           +    I++SG C+   + DA R   +M+    + +L+ +N L+ GF      D     L 
Sbjct: 233 QIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQ 292

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
           L+ + G    V+ +  +++    A    +    +  M++  I+PD+ +++I+ +G  + G
Sbjct: 293 LLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEG 352

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              +A ++L  M + G+ P+ + +  +I G+C+   +  A S+  ++ +    PN  TY 
Sbjct: 353 RVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYS 412

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
            L+ G  +     +A+ + + ME+ G  P   T   + +         EA+ +    E  
Sbjct: 413 ILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIV 472

Query: 445 RQ 446
           R+
Sbjct: 473 RK 474



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/375 (22%), Positives = 182/375 (48%), Gaps = 5/375 (1%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           ++  L ++  F+    ++ +++   +K  S  F+ +I A SE+G  ++A++ F  M+D  
Sbjct: 99  IIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFD 158

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ--DKNVKPNDRTYNILVRAWCSKNSIE 152
           CKP    +N ++     + + E  L  L + +Q    N+ P+  TY IL+   C     +
Sbjct: 159 CKPDLFAFNLILHF---LVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQ 215

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           +A  +  +M   GI P+ + Y+ +     Q  + + A+++  +M+ +    +  T  +++
Sbjct: 216 DALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLL 275

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           +G+CK G ++DA   L  + +      ++ +  LI G    +  +        M    +K
Sbjct: 276 NGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIK 335

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           PDV+ ++ ++   S  G + +   +  +M + G+ PD   ++ L KG+   G   +AES+
Sbjct: 336 PDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESL 395

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              + K+   PN   ++ +I G C    + +A  I+++M ++G  P++ T+ +L+ G  +
Sbjct: 396 RLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCK 455

Query: 393 AKQPWRAEELLQVME 407
           A +   A  L   ME
Sbjct: 456 ANRLEEARLLFYQME 470



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 64/302 (21%), Positives = 139/302 (46%), Gaps = 6/302 (1%)

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           ++++     +N+ E  W V+ ++  S I+  +  ++ L  AY++ G   +A +    M++
Sbjct: 97  DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRD 156

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
              +P+     +I+    ++     A+    +M +  ++P++V +  LI G   +  +  
Sbjct: 157 FDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHG---LCKTCK 213

Query: 259 VDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
              AL L +E    G+ P+ + +S ++     A  +   Q +F  M  +G   D+  +++
Sbjct: 214 TQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNV 273

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  G+ ++G    A ++L  + K G    V+ +  +I+G   A + + A   Y+KM    
Sbjct: 274 LLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLREN 333

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           I P++  Y  ++ G  +  +   A  LL  M E+G+RP       +   +  +G   EA+
Sbjct: 334 IKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAE 393

Query: 436 RV 437
            +
Sbjct: 394 SL 395


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/453 (25%), Positives = 212/453 (46%), Gaps = 42/453 (9%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +P++ T   ++A++ + KR + + SL  ++   G+ P+   FN +IN     GN+ +A
Sbjct: 193 GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 252

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
             + ++M+++G  PT  TYNTL+  Y   G+ + +++L+  M   K ++ +  TYN+ + 
Sbjct: 253 GNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMIC-KGIEADVCTYNVFID 311

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C+ +   +A+ ++ KM    I P+ VTYNTL   + + G+   A Q+  EM    + P
Sbjct: 312 NLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSP 371

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  T   ++ G+C  G+ E+A+R L  M+   +  N V + +L+ G   +   +  + A 
Sbjct: 372 NCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNG---LCKHEKFELAK 428

Query: 264 TLMEEFGVKPDVV---TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
            L+E   V   VV    ++ ++D     G++ +  ++  +M K G+ PD+  +S L  G+
Sbjct: 429 RLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGF 488

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE----------- 369
            R G  + A+ I+  M + G+  N ++++T+I  +C    +  AM +Y            
Sbjct: 489 CRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADH 548

Query: 370 ------------------------KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
                                    M  IG+ PN  TY+ ++ GYG    P  A      
Sbjct: 549 FTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDD 608

Query: 406 MEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           M + G  P   T   +       G   EAK+ L
Sbjct: 609 MIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFL 641



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 200/404 (49%), Gaps = 1/404 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G   +A  +   + E G  PT++TY TL+    ++ R+K+ + LI  +   G+
Sbjct: 240 INGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGI 299

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + D   +N  I+    +    +A  + +KM+     P   TYNTLI G+   GK   + +
Sbjct: 300 EADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQ 359

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   MS+  ++ PN  TYN L+   C     EEA  ++  M A+G++ + VTY TL    
Sbjct: 360 VFNEMSK-FDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGL 418

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            ++ +   A+++L  M+ N +        +++ G CK G +++A++ +  M +  V+P++
Sbjct: 419 CKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDV 478

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + ++SLI GF  + +     + +  M   G+  + + +ST++  +   G + +  +++  
Sbjct: 479 ITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAV 538

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G   D    ++L     R G+  +AE  L  M + G+ PN + +  +I+G+ +   
Sbjct: 539 MNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGD 598

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
              A S ++ M + G +P+  TY +LL G  +      A++ L 
Sbjct: 599 PLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLN 642



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/441 (24%), Positives = 197/441 (44%), Gaps = 37/441 (8%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           I YT L+  L +       + L+  + KDG+ PD I ++++IN     GN+  A +I  +
Sbjct: 444 IAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICR 503

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M  SG       Y+TLI  +   G   E++K+  +M+ + +   +  T N+LV + C   
Sbjct: 504 MYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGH-GADHFTCNVLVSSLCRDG 562

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            + EA   +  M   G+ P+++TY+ +   Y   G+   A     +M      P+  T G
Sbjct: 563 KLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYG 622

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK------------GFLDIKDSD 257
            ++ G CK GN+ +A +FL R+  +    + V++N+L+                D    +
Sbjct: 623 SLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQN 682

Query: 258 GV-----------------DKALTLMEEFGVK-------PDVVTFSTIMDAWSSAGLMGK 293
            V                  KA+T +  FG         P+ V ++ ++D  S AG    
Sbjct: 683 NVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKA 742

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
               F++M+K G  PD   F+ +     R G+  KA    ++MR +GV PN+  +  ++ 
Sbjct: 743 AFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLH 802

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G+     + R +S+Y  M   GI P+  T+ +L+ G  ++  P    +LL  M  +G   
Sbjct: 803 GFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLA 862

Query: 414 KKSTIQLVADSWRAIGLAREA 434
            + T  ++ + +   G  R+A
Sbjct: 863 DQFTFNILINKYSESGKMRKA 883



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/424 (23%), Positives = 188/424 (44%), Gaps = 36/424 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    KG+   A  + + +I +G    + TY   +  L    R      L+ K+ K+ +
Sbjct: 275 LNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMI 334

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +N +IN   + G +  A ++F +M      P   TYN LI G+ +VG  EE+L+
Sbjct: 335 SPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALR 394

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M +   ++ N+ TY  L+   C     E A  ++ +M  + +    + Y  L    
Sbjct: 395 LLDHM-EAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGL 453

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A Q++  M  + V P+  T   +++G+C+ GN++ A   + RM    +  N 
Sbjct: 454 CKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNK 513

Query: 241 VVFNSLIKGFLD------------IKDSDG-----------------------VDKALTL 265
           +++++LI  F              + + +G                        +K L  
Sbjct: 514 IIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCH 573

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M   G+ P+ +T+  I++ + S G        FDDM+K G  P    +  L KG  + G 
Sbjct: 574 MSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGN 633

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A+  L  +       + VM+ T+++  C +  +  A+++++KM +  + P+  TY +
Sbjct: 634 LVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSS 693

Query: 386 LLWG 389
           LL G
Sbjct: 694 LLTG 697



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/490 (22%), Positives = 196/490 (40%), Gaps = 72/490 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N  V +GK   A  +FN + +    P  +TY  L+        F+  L L+  +E  G+
Sbjct: 345 INGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGL 404

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + + + +  ++N   +    + A ++ ++M+ +        Y  LI G    G  +E+++
Sbjct: 405 RLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQ 464

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L+  M +D  V P+  TY+ L+  +C   +I+ A  ++ +M  SG+  + + Y+TL   +
Sbjct: 465 LVGNMYKD-GVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNF 523

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q+G    A ++   M  N    +  TC ++VS  C++G + +A +FL  M  + + PN 
Sbjct: 524 CQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNS 583

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG----------- 289
           + ++ +I G+  I D          M + G  P   T+ +++      G           
Sbjct: 584 ITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNR 643

Query: 290 ----------------LMGKCQE--------IFDDMVKAGIEPDIHVFSILAKGYVR--- 322
                           L   C+         +FD MV+  + PD + +S L  G  R   
Sbjct: 644 LHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGK 703

Query: 323 ---------------------------------AGEPQKAESILTSMRKYGVHPNVVMFT 349
                                            AG P+ A      M K G  P+ V F 
Sbjct: 704 AVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFN 763

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
            +I       +M +A   +  M   G+ PNL TY  LL G+ + +   R   L   M  +
Sbjct: 764 AIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMRE 823

Query: 410 GVRPKKSTIQ 419
           G+ P K T  
Sbjct: 824 GIFPDKLTFH 833



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 115/480 (23%), Positives = 208/480 (43%), Gaps = 43/480 (8%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA  +   + ++G  P +ITY++L+    R    KS   +I ++ + G+  +
Sbjct: 453 LCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLN 512

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSG---------------CK------------ 96
            I+++ +I    + GNV EAMK++  M  +G               C+            
Sbjct: 513 KIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLC 572

Query: 97  --------PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
                   P + TY+ +I GYG++G P  +      M +     P+  TY  L++  C  
Sbjct: 573 HMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQ-HPSFFTYGSLLKGLCKG 631

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
            ++ EA   + ++       D+V YNTL     + G  + A  +  +M  N V P+  T 
Sbjct: 632 GNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTY 691

Query: 209 GIIVSGYCKEGNMEDAM-RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
             +++G C++G    A+  F   M    + PN V++  L+ G   +  +     A    E
Sbjct: 692 SSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDG---LSKAGHPKAAFYFFE 748

Query: 268 EF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
           E    G  PD V F+ I+D+ S  G M K  + F  M   G+ P++  ++IL  G+ +  
Sbjct: 749 EMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQ 808

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              +  S+ ++M + G+ P+ + F ++I G   +      + +  KM   G   +  T+ 
Sbjct: 809 ALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFN 868

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
            L+  Y E+ +  +A +L+  M   GV P + T   + +        RE+  VL    E+
Sbjct: 869 ILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLEN 928



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 180/411 (43%), Gaps = 6/411 (1%)

Query: 4    LVGKGKPHEAHYIFNCLIEEGHR-PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
            L  KGK   A  +F   +  G   P  + YT LV  L++    K+      ++ K G  P
Sbjct: 698  LCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCP 757

Query: 63   DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
            D++ FNA+I++CS  G + +A   F  M+  G  P  +TYN L+ G+    K +  L+ L
Sbjct: 758  DTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFS---KKQALLRYL 814

Query: 123  QLMS--QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             L S    + + P+  T++ L+         +    ++ KM+  G   D  T+N L   Y
Sbjct: 815  SLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKY 874

Query: 181  AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            ++ G+  +A  ++  M    V P+  T   I +G  K+    ++   L+ M E  V P  
Sbjct: 875  SESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKH 934

Query: 241  VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
              + +LI G   + D  G  K    ME  G     V  S ++      G       + D 
Sbjct: 935  AQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDH 994

Query: 301  MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
            M++  + P I  F+ L   + R  +  +A  +   M   G+  +VV +  +I G C    
Sbjct: 995  MLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGD 1054

Query: 361  MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
               A  +YE+M    + PN+ TY  L+     A    + E+LL  ++E+G+
Sbjct: 1055 SAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL 1105



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 175/410 (42%), Gaps = 2/410 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA  ++  +   GH     T   LV++L R  +       +  + + G+ P+SI +
Sbjct: 527 GNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITY 586

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +IN     G+   A   F  M   G  P+  TY +L+KG    G   E+ K L  +  
Sbjct: 587 DCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHY 646

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                 +   YN L+   C   ++ EA  +  KMV + + PD+ TY++L     + G+  
Sbjct: 647 IPGA-VDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAV 705

Query: 188 RAEQML-FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            A  +    M    + PN      +V G  K G+ + A  F   M +    P+ V FN++
Sbjct: 706 TAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAI 765

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I            +   + M  +GV P++ T++ ++  +S    + +   ++  M++ GI
Sbjct: 766 IDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGI 825

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD   F  L  G  ++G P     +L  M   G   +   F  +I+ +  + KM++A  
Sbjct: 826 FPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFD 885

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
           +   M  +G+ P+  TY  +  G  +      +  +L  M E GV PK +
Sbjct: 886 LVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHA 935



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 167/372 (44%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G P  A   F+ +I+ G  P+  TY +L+  L +          ++++       DS+++
Sbjct: 597 GDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMY 656

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++    +SGN+ EA+ +F KM  +   P + TY++L+ G    GK   ++ L      
Sbjct: 657 NTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMG 716

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              + PN   Y  LV         + A+    +M+  G  PD V +N +  + ++ G+  
Sbjct: 717 RGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMM 776

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A      M+   V PN  T  I++ G+ K+  +   +     M    + P+ + F+SLI
Sbjct: 777 KANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLI 836

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G       D   K L  M   G   D  TF+ +++ +S +G M K  ++ + M   G+ 
Sbjct: 837 LGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVF 896

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD   ++ +  G  +    +++  +L  M + GV P    + T+I+G C    +Q A  +
Sbjct: 897 PDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKL 956

Query: 368 YEKMCEIGINPN 379
            ++M  +G   +
Sbjct: 957 KDEMEALGFGSH 968



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/358 (22%), Positives = 161/358 (44%), Gaps = 9/358 (2%)

Query: 86  IFQKMKDSG--CKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           IF  + D+   C    S ++ LI+ Y   G +    E+ +L+ L+      KP+  T N+
Sbjct: 148 IFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVG----FKPSVYTCNM 203

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           ++ +       E  W++  +M   GI P+  T+N L       G   +A  +L +M+ N 
Sbjct: 204 ILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENG 263

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
             P   T   +++ YCK+G  + A+  +  M    +  ++  +N  I        S    
Sbjct: 264 FVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAY 323

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
             L  M +  + P+ VT++T+++ +   G +G   ++F++M K  + P+   ++ L  G+
Sbjct: 324 LLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGH 383

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
              G+ ++A  +L  M   G+  N V + T+++G C   K + A  + E+M    +    
Sbjct: 384 CHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGH 443

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             Y  L+ G  +      A +L+  M + GV P   T   + + +  +G  + AK ++
Sbjct: 444 IAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEII 501



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 102/233 (43%)

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
           +++  Y KEG ++ A+     +  +   P++   N ++   +  K ++ V      M + 
Sbjct: 168 LLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDK 227

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G+ P+V TF+ +++     G + K   +   M + G  P I  ++ L   Y + G  + A
Sbjct: 228 GICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAA 287

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             ++  M   G+  +V  +   I   C   +  +A  + +KM +  I+PN  TY TL+ G
Sbjct: 288 IELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLING 347

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           + +  +   A ++   M +  + P   T   +      +G   EA R+L   E
Sbjct: 348 FVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHME 400



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 1/197 (0%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
             N L  K    E+  + + ++E G  P    Y TL+  + R    +    L  ++E  G 
Sbjct: 906  FNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 965

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
                +  +AM+      G  ++AM +   M      PT +T+ TL+  +    K  E+LK
Sbjct: 966  GSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK 1025

Query: 121  LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L  +M +   +K +   YN+L+   C+      A+ +  +M    + P+  TY  L  A 
Sbjct: 1026 LKGVM-ELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAI 1084

Query: 181  AQYGETYRAEQMLFEMQ 197
            +      + E++L ++Q
Sbjct: 1085 SAANNLIQGEKLLTDLQ 1101



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 1/175 (0%)

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
            F  ++  +   G++    E F+ +   G +P ++  +++    V+    +   S+   M
Sbjct: 165 VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 224

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
              G+ PNV  F  +I+G C    +++A ++ ++M E G  P + TY TLL  Y +  + 
Sbjct: 225 SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 284

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
             A EL+  M  KG+     T  +  D+      + +A  +LK   ++  S PN+
Sbjct: 285 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMIS-PNE 338


>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
 gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
          Length = 538

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/452 (23%), Positives = 226/452 (50%), Gaps = 11/452 (2%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++E G +     +T L   L R+ +F  ++ L + +   G+      +  +++    +G 
Sbjct: 10  VVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGM 69

Query: 80  VDEAMKIFQKMKDSGC-KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
            ++A+++ +++  SG   PT   YN +I G     +  ++ K+L+ M ++ ++ PN  TY
Sbjct: 70  ANQALELVREL--SGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEE-SIVPNVFTY 126

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
            IL+   C  N  + A  V  +M  +G +P+ +TY TL +  ++ GE   A +++ E ++
Sbjct: 127 TILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRS 186

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
            ++  +  TC  IV G CK   ++DA++F+  M+++ V PN V +++L+ GF   +    
Sbjct: 187 LELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGF---RQHGE 243

Query: 259 VDKALTLMEE----FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           +D+ +   EE     G   +   +   +DA   AG + + ++  +++ ++G+ PD+  +S
Sbjct: 244 LDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYS 303

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
           +L   + RAG+   +  +L  MR+ GV P+VV ++T+I+  C   K Q A  + E M   
Sbjct: 304 MLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAA 363

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G  PN+ TY +++ G  ++ +      + ++M +    P   T  ++ +     G+   A
Sbjct: 364 GSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSA 423

Query: 435 KRVLKSAEEDRQSMPNKKDEIAVESIHRKQNL 466
            ++ +  +  R+        + + S+ R   L
Sbjct: 424 VKLFELIKSSREGPDAAAYSMVITSLCRAGKL 455



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 188/402 (46%), Gaps = 40/402 (9%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A+ +   ++EE   P + TYT L+  L R  + K    +  +++++G KP+ I +  +I
Sbjct: 106 DAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLI 165

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
              S +G +DEA+++  + +         T  T++ G     + +++LK ++ M Q   V
Sbjct: 166 QHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQ-MGV 224

Query: 132 KPNDRTYNILVR------------------------------------AWCSKNSIEEAW 155
           +PN+ TY+ LV                                     A C    ++ A 
Sbjct: 225 RPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRAR 284

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
             V ++  SG+ PD VTY+ L   +A+ G+   + ++L +M+ N V+P+  T   +++  
Sbjct: 285 KSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVL 344

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           CKE   +DA R L  M+     PN+V +NS++ G       D V +   +M +    PDV
Sbjct: 345 CKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDV 404

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE-PDIHVFSILAKGYVRAGEPQKAESILT 334
           VT+S IM+  S AG++    ++F +++K+  E PD   +S++     RAG+ ++A  +  
Sbjct: 405 VTYSIIMNGLSKAGMLDSAVKLF-ELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYH 463

Query: 335 SMRKYGVHPNVV-MFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
            M       N+      +++  C+A +   A  I E   E G
Sbjct: 464 GMEVTVAGDNICRALAGLVAALCDAKRTDSARRIVEVARERG 505


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/412 (24%), Positives = 198/412 (48%), Gaps = 4/412 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P ++ Y  +VA      +  +   L++ +    ++PD+  +N +I      G    A+ +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAV 188

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            + M   GC P   TY  L++        ++++KLL  M  DK   P+  TYN+++   C
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEM-HDKGCAPDIVTYNVVLNGIC 247

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            +  +E+A   +  + + G +P+ V+YN + +          AE+++ EM +    PN  
Sbjct: 248 QEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVV 307

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T  +++S  C+ G +E AM  L +M +    PN + +N L+  F   K      + + LM
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELM 367

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              G  PD+V+++T++ A    G +    E+   +   G  P +  ++ +  G  +AG+ 
Sbjct: 368 VSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKT 427

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           ++A  +L  M   G+ P+++ ++T+ SG C   +++ A+  + K+ ++GI P    Y  +
Sbjct: 428 KEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAI 487

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           L G  + ++   A +L   M   G  P +ST  ++ +     GL +EA+ + 
Sbjct: 488 LLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELF 539



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 190/376 (50%), Gaps = 7/376 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G+G+   A  +   +   G  P ++TYT L+ A  ++  +K  + L+ ++   G  PD
Sbjct: 176 LCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPD 235

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N ++N   + G V++AM+  + +   GC+P T +YN ++KG     + E++ KL++
Sbjct: 236 IVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLME 295

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M+  K   PN  T+N+L+   C +  +E A  V+ +M   G  P++++YN L  A+ + 
Sbjct: 296 EMAH-KGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQ 354

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            + ++A + +  M +    P+  +   +++  C+ G ++ A+  L+++K+    P L+ +
Sbjct: 355 KKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISY 414

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N++I G   +  +    +AL L++E    G++PD++T+STI         + +    F  
Sbjct: 415 NTVIDG---LTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCK 471

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +   GI P   +++ +  G  +  E   A  +   M   G  PN   +T ++ G      
Sbjct: 472 VQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGL 531

Query: 361 MQRAMSIYEKMCEIGI 376
           ++ A  ++ ++C  G+
Sbjct: 532 VKEARELFAQLCSRGV 547



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 187/401 (46%), Gaps = 20/401 (4%)

Query: 39  LTRQKRFKSILSLISKVEKDGMKPDSIL----FNAMINACSESGNVDEAMKIFQKMKDSG 94
           L R+      L L+  +   G+ P S        A+I     SG   +A ++      SG
Sbjct: 77  LVRRGELDDALRLVDSLA--GLNPPSPAAVGPCAALIKKLCASGRTADARRVLAA---SG 131

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
             P    YN ++ GY   G+ + + +L+     D  V+P+  TYN L+R  C +     A
Sbjct: 132 --PDVMVYNAMVAGYCGAGQLDAARRLVA----DMPVEPDAYTYNTLIRGLCGRGRTSNA 185

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
             V+  M   G  PD VTY  L  A  +     +A ++L EM +    P+  T  ++++G
Sbjct: 186 LAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNG 245

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
            C+EG +EDAM FL  +      PN V +N ++KG    +  +  +K +  M   G  P+
Sbjct: 246 ICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPN 305

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           VVTF+ ++      GL+    E+ + M + G  P+   ++ L   + +  +  KA   + 
Sbjct: 306 VVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVE 365

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            M   G +P++V + T+++  C   ++  A+ +  ++ + G +P L +Y T++ G  +A 
Sbjct: 366 LMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAG 425

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           +   A ELL  M  KG++P   T   +A      GL RE +
Sbjct: 426 KTKEALELLDEMTSKGLQPDIITYSTIAS-----GLCREDR 461



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 69/306 (22%), Positives = 156/306 (50%), Gaps = 1/306 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  +G+  +A      L   G  P  ++Y  ++  L   +R++    L+ ++   G 
Sbjct: 243 LNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGC 302

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + FN +I+     G V+ AM++ ++M   GC P + +YN L+  +    K  ++++
Sbjct: 303 PPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAME 362

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            ++LM   +   P+  +YN L+ A C    ++ A  +++++   G  P  ++YNT+    
Sbjct: 363 FVELMVS-RGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGL 421

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+T  A ++L EM +  ++P+  T   I SG C+E  +E+A+R   +++++ + P  
Sbjct: 422 TKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTA 481

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            ++N+++ G    +++         M   G  P+  T++ +++  +  GL+ + +E+F  
Sbjct: 482 ALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQ 541

Query: 301 MVKAGI 306
           +   G+
Sbjct: 542 LCSRGV 547


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 210/418 (50%), Gaps = 7/418 (1%)

Query: 7    KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
            + +  E+  +F+ ++ +G    + TY+ ++  L +       L +  +++++GM+P    
Sbjct: 611  RDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGN 670

Query: 67   FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            +  ++++  +   +D A++IF ++++S   P T  YN ++ G     + +E+ KL+  M 
Sbjct: 671  YKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSM- 729

Query: 127  QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +++N+ P+  TY  L+        +EEA+N+  KM   G +PD V Y +L     + G+ 
Sbjct: 730  KNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKL 789

Query: 187  YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
              A  +   M   +  P+  T   ++    KEG +E+A  F          PN+ V++SL
Sbjct: 790  SHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSL 849

Query: 247  IKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            I  F        VD+AL L EE   +   P++VT++ ++   + AG +   +++ ++M K
Sbjct: 850  IDSF---GKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEK 906

Query: 304  AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
             G  PD+  ++IL  G  + G   +AES    M++ G+ P+V+ FT++I       K+  
Sbjct: 907  VGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLE 966

Query: 364  AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            A  +++ M E G NP++ TY  L+   G A +   A  +   M+ KG  P   TI ++
Sbjct: 967  ACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 212/435 (48%), Gaps = 9/435 (2%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            G+  EA  +   + ++G  P+++TY++L+A+  ++ + +  LSL  ++ + G   D   +
Sbjct: 577  GRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTY 636

Query: 68   NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            + +IN   +S +VD+A+ +F +MK+ G +P    Y TL+       K + +L++   + Q
Sbjct: 637  SLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNEL-Q 695

Query: 128  DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + ++ P+   YNI+V      N ++EA  +V  M    I PD  TY +L     + G   
Sbjct: 696  ESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLE 755

Query: 188  RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
             A  M  +M      P+      ++    K G +  A+     M +    P++V ++SLI
Sbjct: 756  EAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLI 815

Query: 248  KGFLDIKDSDG-VDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
                D    +G V++A    E     G  P+V  +S+++D++   G++ +  E+F++M +
Sbjct: 816  ----DSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQR 871

Query: 304  AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
                P+I  ++ L  G  +AG    AE +L  M K G  P++V +  +I G      +  
Sbjct: 872  RQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDE 931

Query: 364  AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
            A S +++M E GI P++ T+ +L+   G+  +   A EL   MEE+G  P   T  ++ D
Sbjct: 932  AESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLID 991

Query: 424  SWRAIGLAREAKRVL 438
                 G   EA  + 
Sbjct: 992  ILGRAGKVHEAAMIF 1006



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 214/448 (47%), Gaps = 9/448 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+  +  G   EA  +   + +    PT++TYTTLV  L +  R    +SL+ ++EK G 
Sbjct: 535 MSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGC 594

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P  + +++++ +  +    +E++ +F +M   GC    STY+ +I         +++L 
Sbjct: 595 EPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALD 654

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M +++ ++P    Y  L+ +      I+ A  +  ++  S + PD   YN +    
Sbjct: 655 VFGRM-KEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGL 713

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A +++  M+N  + P+  T   ++ G  K G +E+A     +M E    P++
Sbjct: 714 VKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDV 773

Query: 241 VVFNSLIKGFLDIKDSDG-VDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQE 296
           V + SL    +D+    G +  AL +      K   PDVVT+S+++D+    G + +   
Sbjct: 774 VAYTSL----MDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYY 829

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
            F++ +  G  P++ V+S L   + + G   +A  +   M++    PN+V +  ++SG  
Sbjct: 830 FFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLA 889

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
            A ++  A  + E+M ++G  P+L TY  L+ G G+      AE   + M+EKG+ P   
Sbjct: 890 KAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVI 949

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEED 444
           T   + +S   +    EA  +  S EE+
Sbjct: 950 TFTSLIESLGKVDKLLEACELFDSMEEE 977



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 122/509 (23%), Positives = 233/509 (45%), Gaps = 67/509 (13%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISK-VEKDG 59
           +++L   G+  EA  +F+ L E+G  P + TY TL+  L +  +   +L++I + VEK G
Sbjct: 434 ISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGG 493

Query: 60  ---MKPDS---------------------------ILFNAMINACSESGNVDEAMKIFQK 89
              +  DS                           I +N +++A   +G+VDEA+K+ + 
Sbjct: 494 ECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEV 553

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           MK   C PT  TY TL+ G G  G+ +E++ LL+ M + +  +P+  TY+ L+ ++  ++
Sbjct: 554 MKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEK-QGCEPSVVTYSSLMASFYKRD 612

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
             EE+ ++  +MV  G   D  TY+ +     +  +  +A  +   M+   + P      
Sbjct: 613 QEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYK 672

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            ++S   K+  ++ A++    ++E  + P+  V+N ++ G +     D   K +  M+  
Sbjct: 673 TLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQ 732

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
            + PD+ T+++++D    +G + +   +F  M + G EPD+  ++ L     + G+   A
Sbjct: 733 NILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHA 792

Query: 330 ESILTSMRK-----------------------------------YGVHPNVVMFTTVISG 354
             I  +M K                                    G  PNV +++++I  
Sbjct: 793 LIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDS 852

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
           +     + RA+ ++E+M      PN+ TY  LL G  +A +   AE+LL+ ME+ G  P 
Sbjct: 853 FGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPD 912

Query: 415 KSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             T  ++ D    +G+  EA+   K  +E
Sbjct: 913 LVTYNILIDGVGKMGMVDEAESYFKRMKE 941



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 119/500 (23%), Positives = 227/500 (45%), Gaps = 67/500 (13%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ LV  G   EA   FN +      P ++TYTTLV  L +  R +    +  +++++  
Sbjct: 329 IDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNC 388

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD+I +N +I+   ++G  D A  +F++MKD G  P   TYN +I   G  G+  E+ +
Sbjct: 389 SPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQ 448

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG----IQPDA------ 170
           L   + +   V P+  TYN L+        +++   ++ +MV  G    I  D+      
Sbjct: 449 LFHDLKEQGAV-PDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEG 507

Query: 171 ---------------------VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
                                +TYNTL  A+   G    A ++L  M+ ++  P   T  
Sbjct: 508 TIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYT 567

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF---------LDIKD----- 255
            +V G  K G +++A+  L  M++    P++V ++SL+  F         L + D     
Sbjct: 568 TLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRK 627

Query: 256 ------------------SDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
                             SD VD+AL +   M+E G++P +  + T++ +      +   
Sbjct: 628 GCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFA 687

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
            +IF+++ ++ + PD  V++I+  G V++    +A  ++ SM+   + P++  +T+++ G
Sbjct: 688 LQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDG 747

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
              + +++ A +++ KM E G  P++  Y +L+   G+  +   A  + + M +K   P 
Sbjct: 748 LGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPD 807

Query: 415 KSTIQLVADSWRAIGLAREA 434
             T   + DS    G   EA
Sbjct: 808 VVTYSSLIDSLGKEGRVEEA 827



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 187/382 (48%), Gaps = 7/382 (1%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            +N L       +A  +F  + EEG  P L  Y TL+++L + ++    L + +++++  +
Sbjct: 640  INCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSL 699

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             PD+ ++N M+N   +S  VDEA K+   MK+    P   TY +L+ G G  G+ EE+  
Sbjct: 700  VPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFN 759

Query: 121  LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            +   M+++ + +P+   Y  L+        +  A  +   M      PD VTY++L  + 
Sbjct: 760  MFTKMTEEGH-EPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSL 818

Query: 181  AQYGETYRAEQMLFEMQNNQVR---PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
             + G   R E+  +  +N+  +   PN      ++  + K+G ++ A+     M+  +  
Sbjct: 819  GKEG---RVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCP 875

Query: 238  PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
            PN+V +N+L+ G       +  +K L  ME+ G  PD+VT++ ++D     G++ + +  
Sbjct: 876  PNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESY 935

Query: 298  FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            F  M + GI PD+  F+ L +   +  +  +A  +  SM + G +P+VV +  +I     
Sbjct: 936  FKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGR 995

Query: 358  AVKMQRAMSIYEKMCEIGINPN 379
            A K+  A  I+ +M   G  P+
Sbjct: 996  AGKVHEAAMIFHEMKVKGCMPD 1017



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/512 (22%), Positives = 219/512 (42%), Gaps = 71/512 (13%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +LV  G  H A  +F  L +   +P   T+   V +  R  R       I ++ K G+
Sbjct: 259 LELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGI 318

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P    F  +I+A  +SGN+DEA K F  MK+  C P   TY TL+ G    G+ EE+ +
Sbjct: 319 DPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACE 378

Query: 121 LLQLMSQ----------------------------------DKNVKPNDRTYNILVRAWC 146
           +   M +                                  D+ + PN RTYNI++    
Sbjct: 379 VFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLG 438

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM---------- 196
                 EAW + + +   G  PD  TYNTL     + G+  +   ++ EM          
Sbjct: 439 KAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIIS 498

Query: 197 ------QNNQVRPNERTC---------------GIIVSGYCKEGNMEDAMRFLYRMKELE 235
                     +   +RT                  ++S +   G++++A++ L  MK+ E
Sbjct: 499 RDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHE 558

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMG 292
             P +V + +L+ G   +  +  +D+A++L   ME+ G +P VVT+S++M ++       
Sbjct: 559 CIPTVVTYTTLVDG---LGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEE 615

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           +   +FD+MV+ G   D+  +S++     ++ +  +A  +   M++ G+ P +  + T++
Sbjct: 616 ESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLL 675

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
           S      K+  A+ I+ ++ E  + P+   Y  ++ G  ++ +   A +L+  M+ + + 
Sbjct: 676 SSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNIL 735

Query: 413 PKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           P   T   + D     G   EA  +     E+
Sbjct: 736 PDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEE 767



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 110/466 (23%), Positives = 202/466 (43%), Gaps = 67/466 (14%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           ++G+  T+ TYT ++  L   +   +++ +++ + K+G +    L  +++     + NV 
Sbjct: 175 QDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVS 234

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
            A++IF +MK  GC P+T+ YN +++     G    ++ +   + Q + ++P+ +T+ I 
Sbjct: 235 GALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFR-IQPDAQTFRIF 293

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           V ++     ++ A   + +M+ SGI P   T+  L  A  + G    A +    M+N + 
Sbjct: 294 VHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRC 353

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG------------ 249
            PN  T   +V+G  K G +E+A      MKE    P+ + +N+LI G            
Sbjct: 354 SPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACG 413

Query: 250 -FLDIKDSDGVDKALTL----------------------MEEFGVKPDVVTFSTIMDAWS 286
            F ++KD   V    T                       ++E G  PDV T++T++D   
Sbjct: 414 LFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLG 473

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIH-------------------------------VFSI 315
             G M K   I  +MV+ G E  I                                 ++ 
Sbjct: 474 KGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNT 533

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L   ++  G   +A  +L  M+K+   P VV +TT++ G   A ++  A+S+  +M + G
Sbjct: 534 LMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQG 593

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             P++ TY +L+  + +  Q   +  L   M  KG     ST  LV
Sbjct: 594 CEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLV 639



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 147/320 (45%), Gaps = 1/320 (0%)

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
           +  G   T  TY  +IK      + +  +++L  M ++ + + +      L+R + S N+
Sbjct: 174 QQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGH-RISMHLLTSLLRTFGSTNN 232

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           +  A  +  +M + G  P    YN +     + G  + A  +  ++   +++P+ +T  I
Sbjct: 233 VSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRI 292

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
            V  + + G ++ A   +  M +  + P +  F  LI   +   + D   K    M+   
Sbjct: 293 FVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLR 352

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
             P+VVT++T+++  + AG + +  E+F +M +    PD   ++ L  G  +AGE   A 
Sbjct: 353 CSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMAC 412

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +   M+  G+ PN+  +  +IS    A +   A  ++  + E G  P++ TY TL+   
Sbjct: 413 GLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVL 472

Query: 391 GEAKQPWRAEELLQVMEEKG 410
           G+  Q  +   +++ M EKG
Sbjct: 473 GKGGQMDKVLAIIKEMVEKG 492



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 126/272 (46%)

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
           TY  + +  A   ET    Q+L  M     R +      ++  +    N+  A+    +M
Sbjct: 184 TYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQM 243

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
           K    +P+  ++N +++  +              + +F ++PD  TF   + +++ +G +
Sbjct: 244 KSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRL 303

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
               E   +M+K+GI+P +H F++L    V++G   +A      M+     PNVV +TT+
Sbjct: 304 DPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTL 363

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           ++G   A +++ A  ++ +M E   +P+   Y TL+ G G+A +   A  L + M+++G+
Sbjct: 364 VNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGL 423

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            P   T  ++       G   EA ++    +E
Sbjct: 424 VPNLRTYNIMISVLGKAGRQPEAWQLFHDLKE 455



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 5/174 (2%)

Query: 20   LIEEGHR----PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
            L EE  R    P ++TY  L++ L +  R      L+ ++EK G  PD + +N +I+   
Sbjct: 865  LFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVG 924

Query: 76   ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
            + G VDEA   F++MK+ G  P   T+ +LI+  G V K  E+ +L   M +++   P+ 
Sbjct: 925  KMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSM-EEEGYNPSV 983

Query: 136  RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
             TYN+L+        + EA  + ++M   G  PD +T   + R  +   + + A
Sbjct: 984  VTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSVREQQFHA 1037


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 201/402 (50%), Gaps = 1/402 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +   + + G  PT++T T L+  L  Q      + L+  +EK     D   +  +IN   
Sbjct: 134 VLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLC 193

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           ++G+   A++  +KM++   KP    Y+T++ G    G   E+L L   MS  K V+PN 
Sbjct: 194 KTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMS-GKGVRPNL 252

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY  L++  C+    +E  +++ +M+  G++ D  T N L  A+ + G+  +A+ ++  
Sbjct: 253 VTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGF 312

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M      P+  T   ++  YC +  M +AMR  + M      P++VVF SLI G+   K+
Sbjct: 313 MILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKN 372

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            + V   L  M + G  PDVVT++T++  +  AG     +E+F +M K G  P++   ++
Sbjct: 373 INKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAV 432

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           +  G  +     +A S+  +M K  +  N+V+++ ++ G C+A K+  A  ++  +   G
Sbjct: 433 ILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKG 492

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           +  N+ TY  ++ G  +     +AE+LL  MEE G  P   T
Sbjct: 493 LQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCT 534



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 208/455 (45%), Gaps = 4/455 (0%)

Query: 15  YIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINAC 74
           +IF+ L   G     IT   ++  L R K      S++  + K G++P  +   A+IN  
Sbjct: 101 HIFSSL---GIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGL 157

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
              GNV +A+ +   M+         TY  LI G    G    +++ L+ M +++N KPN
Sbjct: 158 CVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKM-EERNWKPN 216

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
              Y+ ++   C    + EA N+  +M   G++P+ VTY  L +    +G       +L 
Sbjct: 217 VVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLD 276

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           EM    +R + +T  I+V  +CKEG +  A   +  M      P++  +NSLI  +    
Sbjct: 277 EMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQN 336

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
             +   +   LM   G  PD+V F++++  W     + K   + ++M K G  PD+  ++
Sbjct: 337 KMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWT 396

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            L  G+ +AG P  A+ +  +M KYG  PN+     ++ G C    +  A+S+ E M + 
Sbjct: 397 TLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKS 456

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
            ++ N+  Y  LL G   A +   A EL   +  KG++    T  ++       G   +A
Sbjct: 457 NLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKA 516

Query: 435 KRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSAS 469
           + +L + EE+     N    + V+ +  K+ ++ S
Sbjct: 517 EDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARS 551



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 192/393 (48%), Gaps = 1/393 (0%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           TY  L+  L +     + +  + K+E+   KP+ ++++ +++   + G V EA+ +  +M
Sbjct: 184 TYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEM 243

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
              G +P   TY  LI+G  N G+ +E+  LL  M +   ++ + +T NILV A+C +  
Sbjct: 244 SGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIK-MGMRLDLQTLNILVDAFCKEGK 302

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           + +A +V+  M+ +G  PD  TYN+L   Y    +   A ++   M +    P+      
Sbjct: 303 VMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTS 362

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++ G+CK+ N+   M  L  M ++   P++V + +LI GF          +    M ++G
Sbjct: 363 LIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYG 422

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
             P++ T + I+D      L+ +   + + M K+ ++ +I ++SIL  G   AG+   A 
Sbjct: 423 QVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAW 482

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            + +S+   G+  NV  +T +I G C    + +A  +   M E G  P+  TY   + G 
Sbjct: 483 ELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGL 542

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
              K+  R+ + L +M +KG     +T ++  +
Sbjct: 543 LTKKEIARSIKYLTIMRDKGFSVDAATTEITIN 575



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 106/452 (23%), Positives = 211/452 (46%), Gaps = 47/452 (10%)

Query: 69  AMINACSESG---NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
           +M N C +SG   N+DEA+ +FQ M      P+   +  L+     +     ++ L++ +
Sbjct: 44  SMRNLC-KSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHI 102

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
                ++ +  T NI++   C    +   ++V+  M   G++P  +T   L       G 
Sbjct: 103 FSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGN 162

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
             +A  ++  M+  +   +  T G++++G CK G+   A+ +L +M+E    PN+VV+++
Sbjct: 163 VAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYST 222

Query: 246 LIKGFLDIKDSDG-VDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
           ++ G       DG V +AL L  E    GV+P++VT++ ++    + G   +   + D+M
Sbjct: 223 IMDGLC----KDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEM 278

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESIL---------------------------- 333
           +K G+  D+   +IL   + + G+  +A+S++                            
Sbjct: 279 IKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKM 338

Query: 334 -TSMRKY------GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             +MR +      G  P++V+FT++I GWC    + + M + E+M ++G  P++ T+ TL
Sbjct: 339 NEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTL 398

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
           + G+ +A +P  A+EL   M + G  P   T  ++ D      L  EA  + ++ E+   
Sbjct: 399 IGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNL 458

Query: 447 SMPNKKDEIAVESIHRKQNLSASNSTFLQIPG 478
            +      I ++ +     L+A+   F  +PG
Sbjct: 459 DLNIVIYSILLDGMCSAGKLNAAWELFSSLPG 490



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/384 (24%), Positives = 171/384 (44%), Gaps = 36/384 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   G   EA  + + +  +G RP L+TY  L+  L    R+K   SL+ ++ K GM
Sbjct: 224 MDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGM 283

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + D    N +++A  + G V +A  +   M  +G  P   TYN+LI  Y    K  E+++
Sbjct: 284 RLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMR 343

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +  LM   +   P+   +  L+  WC   +I +  +++ +M   G  PD VT+ TL   +
Sbjct: 344 VFHLMVS-RGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGF 402

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G    A+++   M      PN +TC +I+ G CK   + +A+     M++  +  N+
Sbjct: 403 CQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNI 462

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V+                                   +S ++D   SAG +    E+F  
Sbjct: 463 VI-----------------------------------YSILLDGMCSAGKLNAAWELFSS 487

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +   G++ +++ ++I+ KG  + G   KAE +L +M + G  P+   +   + G     +
Sbjct: 488 LPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKE 547

Query: 361 MQRAMSIYEKMCEIGINPNLKTYE 384
           + R++     M + G + +  T E
Sbjct: 548 IARSIKYLTIMRDKGFSVDAATTE 571



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/248 (20%), Positives = 103/248 (41%), Gaps = 36/248 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++I   + K +EA  +F+ ++  G  P ++ +T+L+    + K    ++ L+ ++ K G 
Sbjct: 329 IHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGF 388

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTST------------------- 101
            PD + +  +I    ++G    A ++F  M   G  P   T                   
Sbjct: 389 VPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVS 448

Query: 102 ----------------YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
                           Y+ L+ G  + GK   + +L   +   K ++ N  TY I+++  
Sbjct: 449 LAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLP-GKGLQINVYTYTIMIKGL 507

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C + S+++A +++  M  +G  PD  TYN   +      E  R+ + L  M++     + 
Sbjct: 508 CKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDA 567

Query: 206 RTCGIIVS 213
            T  I ++
Sbjct: 568 ATTEITIN 575


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 214/462 (46%), Gaps = 18/462 (3%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  E   +   + E G RP+   Y  +V     +++ K    ++ ++ + G+ P 
Sbjct: 122 LCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPC 181

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +   A+INA  + G + +A+++ + MK  GCKP   TYN L++G+ N GK  +++ LL 
Sbjct: 182 VVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLN 241

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +   V P+  TYN+L+R  C    IE A+ ++  M   G+  D  TYN L  A  + 
Sbjct: 242 KM-RVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKD 300

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G T +A  +   ++   ++PN  T   +++G CK G ++ A +FL +M      P+   +
Sbjct: 301 GRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTY 360

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           +S I+    +K S      +  M +  VKP  V ++ ++         G     + +MV 
Sbjct: 361 SSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVS 420

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           +G  PD+  ++   + Y   G   +AE++L  M K GV  + + + T++ G  +  +   
Sbjct: 421 SGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDH 480

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAK--------QP---WRAEE------LLQVM 406
           A+SI ++M  +   PN  TY  LL      +         P   W+A E      L  VM
Sbjct: 481 AVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVM 540

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSM 448
           ++    P   T   + + +   G   EA  ++   +ED  S+
Sbjct: 541 KKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISL 582



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 181/394 (45%), Gaps = 11/394 (2%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           TY  ++ +L R+    S L  +S + + G +PD+  FN++I     +  VD A  +F KM
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
              G      +Y  LI+G+   G+ +E+++L   M Q     P+   Y  LV+  C    
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ-----PDMHMYAALVKGLCKAGR 127

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
            EE   ++ +M   G +P    Y  +        +   AE+ML EM    + P   TC  
Sbjct: 128 GEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTA 187

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF- 269
           +++ YCKEG M DA+R L  MK     PN+  +N+L++GF    +   V KA+ L+ +  
Sbjct: 188 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFC---NEGKVHKAMALLNKMR 244

Query: 270 --GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
             GV PD VT++ ++      G +     +   M   G+  D + ++ L     + G   
Sbjct: 245 VCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 304

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           +A S+  S+   G+ PN V F ++I+G C + K+  A    EKM   G  P+  TY + +
Sbjct: 305 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFI 364

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
               + K        +  M +K V+P      +V
Sbjct: 365 EHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIV 398



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 206/467 (44%), Gaps = 41/467 (8%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G RP   T+ +L+    R  +      L  K+   G   D + + A+I    E+G 
Sbjct: 37  MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGR 96

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +DEA+++F +M     +P    Y  L+KG    G+ EE L +L+ M ++   +P+ R Y 
Sbjct: 97  IDEAVELFGEMD----QPDMHMYAALVKGLCKAGRGEEGLLMLRRM-KELGWRPSTRAYA 151

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            +V   C +   +EA  ++ +M   G+ P  VT   +  AY + G    A ++L  M+  
Sbjct: 152 AVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLR 211

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG---------- 249
             +PN  T   +V G+C EG +  AM  L +M+   V+P+ V +N LI+G          
Sbjct: 212 GCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESA 271

Query: 250 --FLDIKDSDGV--------------------DKALTL---MEEFGVKPDVVTFSTIMDA 284
              L + + DG+                    D+A +L   +E  G+KP+ VTF+++++ 
Sbjct: 272 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLING 331

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
              +G +    +  + MV AG  PD + +S   +   +    Q+  S +  M +  V P+
Sbjct: 332 LCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPS 391

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
            V +T VI               + +M   G NP++ TY T +  Y    +   AE +L 
Sbjct: 392 TVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLM 451

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
            M + GV         + D   +IG    A  +LK       S+PN+
Sbjct: 452 EMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTS-VASVPNQ 497



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/428 (21%), Positives = 182/428 (42%), Gaps = 53/428 (12%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G+  +A  +   +   G +P + TY  LV     + +    ++L++K+   G+
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD++ +N +I      G+++ A ++ + M+  G      TYN LI      G+ +++  
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   + + + +KPN  T+N L+   C    ++ AW  + KMV++G  PD  TY++     
Sbjct: 309 LFDSL-ETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSF---- 363

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                                          +   CK    ++ + F+  M + +V P+ 
Sbjct: 364 -------------------------------IEHLCKMKGSQEGLSFIGEMLQKDVKPST 392

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +  +I   L  ++   V +    M   G  PDVVT++T M A+   G + + + +  +
Sbjct: 393 VNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLME 452

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI-------- 352
           M K G+  D   ++ L  G+   G+   A SIL  M      PN   +  ++        
Sbjct: 453 MSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRL 512

Query: 353 ---------SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
                    +G   A+++     +++ M +    PN  TY ++L G+ E  +   A  L+
Sbjct: 513 VEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLV 572

Query: 404 QVMEEKGV 411
            +M+E  +
Sbjct: 573 SLMKEDSI 580



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 112/462 (24%), Positives = 196/462 (42%), Gaps = 74/462 (16%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK H+A  + N +   G  P  +TY  L+         +S   L+  +E DG+  D   
Sbjct: 230 EGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYT 289

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM- 125
           +NA+INA  + G  D+A  +F  ++  G KP   T+N+LI G    GK + + K L+ M 
Sbjct: 290 YNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMV 349

Query: 126 -----------------------SQD----------KNVKPNDRTYNILVRAWCSKNS-- 150
                                  SQ+          K+VKP+   Y I++     + +  
Sbjct: 350 SAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYG 409

Query: 151 -IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            +   W    +MV+SG  PD VTY T  RAY   G    AE +L EM  N V  +     
Sbjct: 410 LVARTWG---EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYN 466

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD--------GVDK 261
            ++ G+   G  + A+  L +M  +   PN   +  L++  + ++  +        GV K
Sbjct: 467 TLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWK 526

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           A+ L + FG                          +FD M K    P+   +S + +G+ 
Sbjct: 527 AIELTDVFG--------------------------LFDVMKKNEFLPNSGTYSSILEGFS 560

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
             G  ++A S+++ M++  +  N  ++T +++ +C + +   A  +   M + G  P+L 
Sbjct: 561 EDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLM 620

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           +Y+ LL G     Q  +A+E+      K   P +   +++ D
Sbjct: 621 SYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIID 662



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/401 (23%), Positives = 162/401 (40%), Gaps = 88/401 (21%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           TY  L+ AL +  R     SL   +E  G+KP+++ FN++IN   +SG VD A K  +KM
Sbjct: 289 TYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKM 348

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV-------- 142
             +GC P T TY++ I+    +   +E L  +  M Q K+VKP+   Y I++        
Sbjct: 349 VSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQ-KDVKPSTVNYTIVIHKLLKERN 407

Query: 143 ---------------------------RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
                                      RA+C +  + EA NV+ +M  +G+  D + YNT
Sbjct: 408 YGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNT 467

Query: 176 LARAYAQYGETYRA----EQM--------------------------------------- 192
           L   +A  G+T  A    +QM                                       
Sbjct: 468 LMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKA 527

Query: 193 --------LFE-MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                   LF+ M+ N+  PN  T   I+ G+ ++G  E+A   +  MKE  +  N  ++
Sbjct: 528 IELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIY 587

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            +L+  F   K        +  M + G  P ++++  ++      G   K +EIF +   
Sbjct: 588 TALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRW 647

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
               PD  V+ ++  G ++ G    +  ++  + +    P+
Sbjct: 648 KDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPS 688



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 113/269 (42%), Gaps = 39/269 (14%)

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++   C+  ++  A+R+L  M      P+   FNSLI G+      D        M   G
Sbjct: 17  VIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRG 76

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG------ 324
              DVV+++ +++ +   G + +  E+F +M     +PD+H+++ L KG  +AG      
Sbjct: 77  FAQDVVSYAALIEGFCETGRIDEAVELFGEM----DQPDMHMYAALVKGLCKAGRGEEGL 132

Query: 325 -----------------------------EPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
                                        + ++AE +L  M + G+ P VV  T VI+ +
Sbjct: 133 LMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAY 192

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C   +M  A+ + E M   G  PN+ TY  L+ G+    +  +A  LL  M   GV P  
Sbjct: 193 CKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDA 252

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEED 444
            T  L+       G    A R+L+  E D
Sbjct: 253 VTYNLLIRGQCIDGHIESAFRLLRLMEGD 281



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/281 (19%), Positives = 119/281 (42%), Gaps = 18/281 (6%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G  P ++TYTT + A   + R     +++ ++ K+G+  D++ +N +++  +  G 
Sbjct: 418 MVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQ 477

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL-----------------L 122
            D A+ I ++M      P   TY  L++    +   E+ L L                  
Sbjct: 478 TDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLF 537

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
            +M +++ + PN  TY+ ++  +      EEA ++V  M    I  +   Y  L   + +
Sbjct: 538 DVMKKNEFL-PNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCK 596

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                 A  ++  M  +   P+  +   ++SG   EG  + A       +  +  P+ +V
Sbjct: 597 SKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIV 656

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD 283
           +  +I G +    SD   + + ++E    +P   T++ + +
Sbjct: 657 WKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTE 697



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 29/134 (21%), Positives = 59/134 (44%), Gaps = 1/134 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  + + + E+        YT LV    + KR+     L+  + + G  P  + +
Sbjct: 563 GRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSY 622

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +++     G  D+A +IF   +     P    +  +I G    G  + S +++ +M +
Sbjct: 623 QHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMI-IMLE 681

Query: 128 DKNVKPNDRTYNIL 141
             N +P+ +TY +L
Sbjct: 682 RMNCRPSHQTYAML 695


>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
          Length = 547

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 197/418 (47%), Gaps = 9/418 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKV-EKDGMKPDSILFNAMINACSESGNVDEAMK 85
           P+  +Y  ++A L R  R +  L L  ++ ++ G  P++  F+ +  +C+ +G +D A  
Sbjct: 106 PSEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLDAAST 165

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +  K    GC      YN L+      G+ ++++ L +   QD    P+  ++N++++  
Sbjct: 166 LLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGV 225

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV-RPN 204
           C   + ++A  +V +M   G  PD +T+N L     +  +  +  ++L  +Q + V  PN
Sbjct: 226 CRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPN 285

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF---LDIKDSDGVDK 261
             T   ++SGYCK G MEDAM     M E    PN V +N LI G+   LD++ +  + +
Sbjct: 286 AVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYR 345

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            L L       PDVVTFS+++D +   G +   + I+ +M    I+P+++ FSI+     
Sbjct: 346 QLILRH---CPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLC 402

Query: 322 RAGEPQKAESILTSMR-KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
           +     +A  IL  +  +  + P   ++  VI   C   K+  A  I   M E G +P+ 
Sbjct: 403 KQNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDK 462

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            TY  L+ G+    +   A  L   M E G RP   T+          G+  E  +++
Sbjct: 463 YTYTILIIGHCMKGRIPEAITLFHKMVEAGCRPDNITVNSFVSCVLKAGMPNEVDQIM 520



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/378 (22%), Positives = 172/378 (45%), Gaps = 14/378 (3%)

Query: 83  AMKIFQKMKDS--GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           A++IF  +        P+  +Y  +I      G+  ++LKL   M       P    ++ 
Sbjct: 90  ALRIFSALHSPPLSVPPSEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSF 149

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE--MQN 198
           +  +  +   ++ A  ++ K    G   +   YN L  +   +G    A   LFE  +Q+
Sbjct: 150 VAGSCTNAGLLDAASTLLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVA-LFESWIQD 208

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
               P+  +  +++ G C+ GN + A+  + RM E    P+ +  N L+ G    K  + 
Sbjct: 209 GLYSPDVWSFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNK 268

Query: 259 VDKALTLMEEFGV-KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
             + L  ++  GV  P+ VT+++++  +  AG M     +++DM+++G  P+   +++L 
Sbjct: 269 GHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLI 328

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            GY +A + + A  +   +      P+VV F+++I G+C   ++  A  I+++M    I 
Sbjct: 329 NGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQ 388

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR----PKKSTIQLVADSWRAIGLARE 433
           PN+ T+  ++  +   KQ  R+ E L ++ E  +R    P+      V D     G   E
Sbjct: 389 PNVYTFSIII--HSLCKQN-RSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDE 445

Query: 434 AKRVLKSAEEDRQSMPNK 451
           A  ++   +E +   P+K
Sbjct: 446 ANLIVTDMKE-KGCHPDK 462



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 96/212 (45%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  ++N ++E G RP  +TY  L+    +    +S + +  ++      PD + F
Sbjct: 300 GKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTF 359

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +++I+     G +D+A +I+++M     +P   T++ +I       +  E+L +L+ ++ 
Sbjct: 360 SSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNM 419

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
             ++ P    YN ++   C    ++EA  +V  M   G  PD  TY  L   +   G   
Sbjct: 420 RTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIP 479

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEG 219
            A  +  +M     RP+  T    VS   K G
Sbjct: 480 EAITLFHKMVEAGCRPDNITVNSFVSCVLKAG 511



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 3/89 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++IL   GK  EA+ I   + E+G  P   TYT L+     + R    ++L  K+ + G 
Sbjct: 434 IDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVEAGC 493

Query: 61  KPDSILFNAMINACSESG---NVDEAMKI 86
           +PD+I  N+ ++   ++G    VD+ M I
Sbjct: 494 RPDNITVNSFVSCVLKAGMPNEVDQIMLI 522


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 211/450 (46%), Gaps = 43/450 (9%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  E   + + +  +   P   TY+ L   L+R    K++LSL  K  K+G+   
Sbjct: 276 LCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIG 335

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
               + ++N   + G V  A ++ Q + ++G  PT   YNTLI GY   G+ E +     
Sbjct: 336 DYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFG 395

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + +++KP+  TYN L+   C    I  A +++ +M  +G+ P   T+NTL  AY + 
Sbjct: 396 QM-KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 454

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+  +   +L EMQ N ++PN  + G IV+ +CK G + +A+  L  M   +V PN  V+
Sbjct: 455 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 514

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N++I  +++   +D     +  M+  G+ P +VT+                         
Sbjct: 515 NAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTY------------------------- 549

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
                     ++L KG     +  +AE I+ S+  + + P+ V + T+IS  C    + +
Sbjct: 550 ----------NLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDK 599

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+ + ++M + GI   ++TY  L+ G G A +    E L Q M +  V P  +   ++ +
Sbjct: 600 ALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVE 659

Query: 424 SWRAIGLAREAKRVLKSAEEDRQSMPNKKD 453
           ++   G   E K     AE+ R+ M  K++
Sbjct: 660 AYSKYG--NEIK-----AEDLRKEMLQKRN 682



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/439 (24%), Positives = 203/439 (46%), Gaps = 2/439 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP-DSIL 66
           G+  +    F  L   G RP    +   V A          + ++ ++ +DG  P ++  
Sbjct: 139 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 198

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I     +G   +A+++F +M +    P   TYNT+I G+   G  E    L   M 
Sbjct: 199 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMV 258

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
               +KPN  TYN+L+   C    + E   ++ +M +  + PD  TY+ L    ++ G++
Sbjct: 259 C-HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 317

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
                +  +   N V   + TC I+++G CK+G +  A   L  +    + P  V++N+L
Sbjct: 318 KAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 377

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G+    + +G       M+   +KPD +T++ +++    A  +   Q++  +M   G+
Sbjct: 378 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV 437

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P +  F+ L   Y R G+ +K   +L+ M++ G+ PNVV + ++++ +C   K+  A++
Sbjct: 438 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVA 497

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           I + M    + PN + Y  ++  Y E     +A  L++ M+  G+ P   T  L+     
Sbjct: 498 ILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLC 557

Query: 427 AIGLAREAKRVLKSAEEDR 445
                 EA+ ++ S    R
Sbjct: 558 NQSQISEAEEIINSLSNHR 576



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 182/387 (47%), Gaps = 1/387 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   +Y  ++A + R  R    + +  ++ +  + P+ I +N MI+   + G+++    +
Sbjct: 194 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSL 253

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M   G KP   TYN L+ G    G+  E+  LL  M+  K V P+  TY+IL     
Sbjct: 254 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMV-PDGFTYSILFDGLS 312

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                +   ++  K + +G+     T + L     + G+   AE++L  + N  + P   
Sbjct: 313 RNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 372

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               +++GYC+ G +E A     +MK   + P+ + +N+LI G    +        L  M
Sbjct: 373 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 432

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           ++ GV P V TF+T++DA+   G + KC  +  +M + G++P++  +  +   + + G+ 
Sbjct: 433 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 492

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +A +IL  M    V PN  ++  +I  +       +A  + EKM   GI+P++ TY  L
Sbjct: 493 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLL 552

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRP 413
           + G     Q   AEE++  +    + P
Sbjct: 553 IKGLCNQSQISEAEEIINSLSNHRLIP 579



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 90/395 (22%), Positives = 180/395 (45%), Gaps = 38/395 (9%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEE 117
           G +PD+  +N  + AC  +G++ EA+ + ++M +D    P   +YN +I G    G+  +
Sbjct: 155 GARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGD 214

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           ++++   M++ + V PN  TYN ++        +E  +++  +MV  G++P+A+TYN   
Sbjct: 215 AVEVFDEMTE-RAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYN--- 270

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
                                           +++SG C+ G M +    L  M   ++ 
Sbjct: 271 --------------------------------VLLSGLCRAGRMGETSALLDEMASQKMV 298

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P+   ++ L  G     DS  +        + GV     T S +++     G +   +E+
Sbjct: 299 PDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV 358

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
              +V AG+ P   +++ L  GY + GE + A S    M+   + P+ + +  +I+G C 
Sbjct: 359 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 418

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           A ++  A  +  +M + G+NP ++T+ TL+  YG   Q  +   +L  M+E G++P   +
Sbjct: 419 AERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVS 478

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK 452
              + +++   G   EA  +L      +  +PN +
Sbjct: 479 YGSIVNAFCKNGKIPEAVAILDDMFH-KDVLPNAQ 512



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 1/196 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N     GK  EA  I + +  +   P    Y  ++ A            L+ K++ +G+
Sbjct: 483 VNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGI 542

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + +N +I        + EA +I   + +    P   +YNTLI      G  +++L 
Sbjct: 543 SPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD 602

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L Q M +   +K   RTY+ L+        + E   +  KM+ + + P    +N +  AY
Sbjct: 603 LQQRMHK-YGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAY 661

Query: 181 AQYGETYRAEQMLFEM 196
           ++YG   +AE +  EM
Sbjct: 662 SKYGNEIKAEDLRKEM 677


>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
 gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
          Length = 440

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 179/341 (52%), Gaps = 2/341 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA-CSESGNVDEAMK 85
           PTL TY  L+    R  R     + +  V K G + + I+F  ++ + C+E    +    
Sbjct: 96  PTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNI 155

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK-NVKPNDRTYNILVRA 144
           + ++M + GC P   +YN L+KG  +  + +E+L+LL +M+ D  +  P+  +Y+ ++  
Sbjct: 156 VLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDG 215

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
              +   ++A++  ++M+  GI PD VTYNT+  A  +     +A  +L  M  N V P+
Sbjct: 216 LFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPD 275

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   IV GYC  G  ++A+  L +M    V P+ V + SL+             K L 
Sbjct: 276 CITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILD 335

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M + G+KP+V+T+ST++  +++ G + + +++ D MV+ GI+PD HVFSIL     +  
Sbjct: 336 SMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQ 395

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
               A  + + MR+  + P+VV + T+I G C + ++  AM
Sbjct: 396 NVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDAM 436



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 143/299 (47%), Gaps = 3/299 (1%)

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           S D  V P   TY IL+   C    ++  +  +  ++  G + + + +  L ++      
Sbjct: 89  SSDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKR 148

Query: 186 TYRAEQMLFE-MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE--LEVHPNLVV 242
           T  A  ++   M      P+  +  I++ G C E   ++A+  L+ M +   +  P++V 
Sbjct: 149 TSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVS 208

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           ++++I G     DSD        M E G+ PDVVT++TI+ A   A  M K  ++ + MV
Sbjct: 209 YSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMV 268

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           K G+ PD   ++ +  GY  +G+ ++A  IL  M   GV P+ V +T+++   C   +  
Sbjct: 269 KNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCI 328

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            A  I + M + G+ PN+ TY TLL GY          +LL +M   G++P +    ++
Sbjct: 329 EARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSIL 387



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 133/272 (48%), Gaps = 3/272 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG--MKPDSILFNAMINACSES 77
           + E G  P + +Y  L+  L  + R +  L L+  +  DG    PD + ++ +I+   + 
Sbjct: 160 MTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKE 219

Query: 78  GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT 137
           G+ D+A   + +M + G  P   TYNT++         ++++ +L  M ++  V P+  T
Sbjct: 220 GDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKN-GVMPDCIT 278

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           YN +V  +CS    +EA  ++ KM + G++PDAVTY +L     + G    A ++L  M 
Sbjct: 279 YNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMI 338

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
              ++PN  T   ++ GY  +G + +    L  M    + P+  VF+ LI      ++ D
Sbjct: 339 KRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVD 398

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
                 + M +  + PDVVT+ T++D    +G
Sbjct: 399 VAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSG 430



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 125/222 (56%), Gaps = 1/222 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G   +A+  ++ ++E G  P ++TY T+VAAL + +     + +++++ K+G+ PD
Sbjct: 216 LFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPD 275

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I +N++++    SG   EA+ I +KM   G +P   TY +L+      G+  E+ K+L 
Sbjct: 276 CITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILD 335

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + + +KPN  TY+ L+  + +K ++ E  +++  MV +GIQPD   ++ L  A  ++
Sbjct: 336 SMIK-RGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKH 394

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
                A  +  +M+  ++ P+  T G ++ G CK G ++DAM
Sbjct: 395 QNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDAM 436



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 124/276 (44%), Gaps = 14/276 (5%)

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
           AV  ++ A A + +    R+        +  V P   T GI++   C+ G ++     L 
Sbjct: 70  AVARDSPAAAVSGFNRMARS-------SDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLG 122

Query: 230 RM--KELEVHPNLVVFNSLIKGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
            +  K   V P  ++F  L+K    + + S+ ++  L  M E G  P V +++ ++    
Sbjct: 123 NVIKKGYRVEP--IIFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLC 180

Query: 287 SAGLMGKCQEIFDDMVKAG--IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
                 +  E+   M   G    PD+  +S +  G  + G+  KA S    M + G+ P+
Sbjct: 181 HESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPD 240

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
           VV + T+++  C A  M +AM +  +M + G+ P+  TY +++ GY  + Q   A  +L+
Sbjct: 241 VVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILE 300

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            M   GV P   T   + D     G   EA+++L S
Sbjct: 301 KMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDS 336



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 67/119 (56%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   G+  EA  I + +I+ G +P +ITY+TL+     +     +  L+  + ++G+
Sbjct: 318 MDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGI 377

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +PD  +F+ +I AC++  NVD AM +F KM+     P   TY TLI G    G+ ++++
Sbjct: 378 QPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDAM 436


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 208/444 (46%), Gaps = 18/444 (4%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E G RP+   Y  +V    R+++ K    ++ ++ + G+ P  +   A+INA  + G + 
Sbjct: 282 ELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMS 341

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +A+++ + MK  GCKP   TYN L++G+ N GK  +++ LL  M +   V P+  TYN+L
Sbjct: 342 DALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM-RACGVNPDAVTYNLL 400

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +R  C    IE A+ ++  M   G+  D  TYN L  A  + G T +A  +   ++   +
Sbjct: 401 IRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGI 460

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           +PN  T   +++G CK G  + A +FL +M      P+   ++S I+    +K S     
Sbjct: 461 KPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLS 520

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            +  M +  VKP  V ++ ++         G     + +MV +G  PD+  ++   + Y 
Sbjct: 521 FIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYC 580

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
             G   +AE++L  M K GV  + + + T++ G  +  +   A+SI ++M  +   PN  
Sbjct: 581 IEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQF 640

Query: 382 TYETLLWGYGEAK--------QP---WRAEE------LLQVMEEKGVRPKKSTIQLVADS 424
           TY  LL      +         P   W+A E      L  VM++    P   T   + + 
Sbjct: 641 TYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEG 700

Query: 425 WRAIGLAREAKRVLKSAEEDRQSM 448
           +   G   EA  ++   +ED  S+
Sbjct: 701 FSEDGRTEEATSLVSLMKEDSISL 724



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 183/398 (45%), Gaps = 11/398 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT  TY  ++ +L R+      L  +S + + G +PD+  FN++I     +  VD A  +
Sbjct: 151 PTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDL 210

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F KM   G      +Y TLI+G    G+ +E+++L   M Q     P+   Y  LV+  C
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ-----PDMHMYAALVKGLC 265

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           +    EE   ++ +M   G +P    Y  +     +  +   AE+ML EM    + P   
Sbjct: 266 NAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVV 325

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL- 265
           TC  +++ YCKEG M DA+R L  MK     PN+  +N+L++GF    +   V KA+TL 
Sbjct: 326 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFC---NEGKVHKAMTLL 382

Query: 266 --MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M   GV PD VT++ ++      G +     +   M   G+  D + ++ L     + 
Sbjct: 383 NKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKD 442

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G   +A S+  S+   G+ PN V F ++I+G C + K   A    EKM   G  P+  TY
Sbjct: 443 GRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTY 502

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            + +    + K        +  M +K V+P      +V
Sbjct: 503 SSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIV 540



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 194/420 (46%), Gaps = 18/420 (4%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  +   + E+G  P ++T T ++ A  ++ R    L ++  ++  G KP+   +N
Sbjct: 304 KAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYN 363

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           A++      G V +AM +  KM+  G  P   TYN LI+G    G  E + +LL+LM  D
Sbjct: 364 ALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGD 423

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
             +  +  TYN L+ A C     ++A ++   +   GI+P+AVT+N+L     + G+   
Sbjct: 424 GLIA-DQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADI 482

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A + L +M +    P+  T    +   CK    ++ + F+  M + +V P+ V +  +I 
Sbjct: 483 AWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIH 542

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
             L  ++   V +    M   G  PDVVT++T M A+   G + + + +  +M K G+  
Sbjct: 543 KLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTV 602

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI---------------- 352
           D   ++ L  G+   G+   A SIL  M      PN   +  ++                
Sbjct: 603 DTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLT 662

Query: 353 -SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
            +G   A+++     +++ M +    PN  TY ++L G+ E  +   A  L+ +M+E  +
Sbjct: 663 PAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSI 722



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 205/470 (43%), Gaps = 41/470 (8%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
            + ++  G RP   T+ +L+    R  +      L  K+   G   D + +  +I    E
Sbjct: 176 LSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCE 235

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
           +G +DEA+++F +M     +P    Y  L+KG  N  + EE L +L+ M ++   +P+ R
Sbjct: 236 AGRIDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRM-KELGWRPSTR 290

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
            Y  +V   C +   +EA  ++ +M   G+ P  VT   +  AY + G    A ++L  M
Sbjct: 291 AYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELM 350

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG------- 249
           +    +PN  T   +V G+C EG +  AM  L +M+   V+P+ V +N LI+G       
Sbjct: 351 KLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHI 410

Query: 250 -----FLDIKDSDGV--------------------DKALTL---MEEFGVKPDVVTFSTI 281
                 L + + DG+                    D+A +L   +E  G+KP+ VTF+++
Sbjct: 411 ESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSL 470

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           ++    +G      +  + MV AG  PD + +S   +   +    Q+  S +  M +  V
Sbjct: 471 INGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDV 530

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
            P+ V +T VI               + +M   G NP++ TY T +  Y    +   AE 
Sbjct: 531 KPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAEN 590

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
           +L  M + GV         + D   +IG    A  +LK       S+PN+
Sbjct: 591 VLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTS-VASVPNQ 639



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 112/462 (24%), Positives = 194/462 (41%), Gaps = 74/462 (16%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK H+A  + N +   G  P  +TY  L+         +S   L+  +E DG+  D   
Sbjct: 372 EGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYT 431

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM- 125
           +NA+INA  + G  D+A  +F  ++  G KP   T+N+LI G    GK + + K L+ M 
Sbjct: 432 YNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMV 491

Query: 126 -----------------------SQD----------KNVKPNDRTYNILVRAWCSKNS-- 150
                                  SQ+          K+VKP+   Y I++     + +  
Sbjct: 492 SAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYG 551

Query: 151 -IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            +   W    +MV+SG  PD VTY T  RAY   G    AE +L EM  N V  +     
Sbjct: 552 LVARTWG---EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYN 608

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK--------DSDGVDK 261
            ++ G+   G  + A+  L +M  +   PN   +  L++  + ++           GV K
Sbjct: 609 TLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWK 668

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           A+ L + FG                          +FD M K    P+   +S + +G+ 
Sbjct: 669 AIELTDVFG--------------------------LFDVMKKNEFLPNSGTYSSILEGFS 702

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
             G  ++A S+++ M++  +  N  ++T +++ +C + +   A  +   M + G  P L 
Sbjct: 703 EDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLM 762

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           +Y+ LL G     Q  +A+E+      K   P +   +++ D
Sbjct: 763 SYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIID 804



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 162/353 (45%), Gaps = 6/353 (1%)

Query: 67  FNAMINACSESGNVDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
           F +++   S       A+++F  M + +   PT  TYN +I+          +L+ L LM
Sbjct: 120 FASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLM 179

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
            +    +P+  T+N L+  +C  N ++ A ++  KM   G   D V+Y TL     + G 
Sbjct: 180 VR-SGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 238

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A ++  EM     +P+      +V G C     E+ +  L RMKEL   P+   + +
Sbjct: 239 IDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 294

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           ++      + +   ++ L  M E G+ P VVT + +++A+   G M     + + M   G
Sbjct: 295 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 354

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
            +P++  ++ L +G+   G+  KA ++L  MR  GV+P+ V +  +I G C    ++ A 
Sbjct: 355 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 414

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            +   M   G+  +  TY  L+    +  +  +A  L   +E +G++P   T 
Sbjct: 415 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTF 467



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/401 (23%), Positives = 161/401 (40%), Gaps = 88/401 (21%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           TY  L+ AL +  R     SL   +E  G+KP+++ FN++IN   +SG  D A K  +KM
Sbjct: 431 TYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKM 490

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV-------- 142
             +GC P T TY++ I+    +   +E L  +  M Q K+VKP+   Y I++        
Sbjct: 491 VSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQ-KDVKPSTVNYTIVIHKLLKERN 549

Query: 143 ---------------------------RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
                                      RA+C +  + EA NV+ +M  +G+  D + YNT
Sbjct: 550 YGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNT 609

Query: 176 LARAYAQYGETYRA----EQM--------------------------------------- 192
           L   +A  G+T  A    +QM                                       
Sbjct: 610 LMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKA 669

Query: 193 --------LFE-MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                   LF+ M+ N+  PN  T   I+ G+ ++G  E+A   +  MKE  +  N  ++
Sbjct: 670 IELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIY 729

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            +L+  F   K        +  M + G  P ++++  ++      G   K +EIF +   
Sbjct: 730 TALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRW 789

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
               PD  V+ ++  G ++ G    +  ++  + +    P+
Sbjct: 790 KDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPS 830



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 115/277 (41%), Gaps = 39/277 (14%)

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P   T   ++   C+  ++  A+R+L  M      P+   FNSLI G+      D     
Sbjct: 151 PTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDL 210

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              M   G   DVV+++T+++    AG + +  E+F +M     +PD+H+++ L KG   
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEM----DQPDMHMYAALVKGLCN 266

Query: 323 A--GE---------------------------------PQKAESILTSMRKYGVHPNVVM 347
           A  GE                                  ++AE +L  M + G+ P VV 
Sbjct: 267 AERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVT 326

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
            T VI+ +C   +M  A+ + E M   G  PN+ TY  L+ G+    +  +A  LL  M 
Sbjct: 327 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMR 386

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
             GV P   T  L+       G    A R+L+  E D
Sbjct: 387 ACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGD 423



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/281 (19%), Positives = 118/281 (41%), Gaps = 18/281 (6%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G  P ++TYTT + A   + R     +++ ++ K+G+  D++ +N +++  +  G 
Sbjct: 560 MVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQ 619

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL-----------------L 122
            D A+ I ++M      P   TY  L++    +   E+ L L                  
Sbjct: 620 TDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLF 679

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
            +M +++ + PN  TY+ ++  +      EEA ++V  M    I  +   Y  L   + +
Sbjct: 680 DVMKKNEFL-PNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCK 738

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                 A  ++  M  +   P   +   ++SG   EG  + A       +  +  P+ +V
Sbjct: 739 SKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIV 798

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD 283
           +  +I G +    SD   + + ++E    +P   T++ + +
Sbjct: 799 WKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTE 839



 Score = 42.0 bits (97), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 29/134 (21%), Positives = 59/134 (44%), Gaps = 1/134 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  + + + E+        YT LV    + KR+     L+  + + G  P  + +
Sbjct: 705 GRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSY 764

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +++     G  D+A +IF   +     P    +  +I G    G  + S +++ +M +
Sbjct: 765 QHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMI-IMLE 823

Query: 128 DKNVKPNDRTYNIL 141
             N +P+ +TY +L
Sbjct: 824 RMNCRPSHQTYAML 837


>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
          Length = 581

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 189/425 (44%), Gaps = 3/425 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKD-GMKPDSILFNAMINACSESGNVDEAMK 85
           P+  +   ++  L R  R    L L  ++    G  PD+   + ++++C+ +  +D +  
Sbjct: 140 PSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASAT 199

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +  K  + GC+     YN L+      G+  + + L +   QD+   P+  ++N++++  
Sbjct: 200 LLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGV 259

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV-RPN 204
           C    +++A  +V +M   G  PD VT+N +     +  E  R  ++L  +Q + V  PN
Sbjct: 260 CRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPN 319

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   ++SGYCK G +EDAM     M    + PN V +N LI G+  + D     +   
Sbjct: 320 VVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQ 379

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M      PDVVTFS+++D +   G +     I+ DM +  I+P+++ FSI+     +  
Sbjct: 380 QMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQN 439

Query: 325 EPQKAESILTSMR-KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
              +A  +L  +  +  + P   ++  VI   C   K+  A  I + M E G  P+  TY
Sbjct: 440 RSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTY 499

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             L+ GY    +   A      M E G  P   T+          G+  E   V++ A  
Sbjct: 500 TILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVMRLASG 559

Query: 444 DRQSM 448
              S+
Sbjct: 560 GASSI 564



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 160/337 (47%), Gaps = 8/337 (2%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM-KPDSILFNAMINACSESGNV 80
           E G R     Y  L+++L  + R   +++L  +  +D +  PD   FN +I      G V
Sbjct: 206 EFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQV 265

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
            +A+++ ++M + GC P T T+N ++ G     +     ++L+ + +D    PN  T+  
Sbjct: 266 QKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTS 325

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           ++  +C    +E+A  V   MVASGI P+ VTYN L   Y + G+   A ++  +M   +
Sbjct: 326 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 385

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
             P+  T   ++ GYC+ G ++DA+R    M +  + PN+  F+ +I        S   D
Sbjct: 386 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRS---D 442

Query: 261 KALTLMEEFGVKPDVV----TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           +A+ L+ E  ++PD+      ++ ++D     G + +   I   M + G  PD + ++IL
Sbjct: 443 EAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTIL 502

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
             GY       +A      M + G  P+ +     IS
Sbjct: 503 IIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFIS 539



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 113/283 (39%), Gaps = 38/283 (13%)

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRM-KELEVHPNLVVFNSLIKGFLDIKDSDGV 259
           + P+  +C  I+   C+ G   DA++   +M       P+    + L+         D  
Sbjct: 138 ITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDAS 197

Query: 260 DKALTLMEEFGVK------------------------------------PDVVTFSTIMD 283
              L+   EFG +                                    PDV +F+ ++ 
Sbjct: 198 ATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIK 257

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV-H 342
                G + K  E+ + M + G  PD    +I+  G  R  E  +   +L  +++ GV  
Sbjct: 258 GVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCM 317

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           PNVV FT+VISG+C A K++ AM++Y  M   GI PN  TY  L+ GYG+      A E+
Sbjct: 318 PNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEV 377

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
            Q M      P   T   + D +   G   +A R+     + R
Sbjct: 378 YQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHR 420



 Score = 43.9 bits (102), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 3/89 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L   GK  EA+ I   + E+G RP   TYT L+     + R    +    ++ + G 
Sbjct: 468 IDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGC 527

Query: 61  KPDSILFNAMINACSESG---NVDEAMKI 86
            PDSI  N  I+   ++G    VD  M++
Sbjct: 528 SPDSITVNCFISCLLKAGMPNEVDHVMRL 556


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/422 (23%), Positives = 211/422 (50%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV KG+   A  +F+ ++  G  P +   + +V A  +  R    + ++ K+ K+G++P+
Sbjct: 201 LVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPN 260

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N ++N     G+ +   ++ + M + G      T   L++GY   GK +E+ KLL+
Sbjct: 261 VVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLR 320

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            + +D+ +  ++R Y +LV  +C    +E+A  +  +M+  G++ + V  NTL + Y + 
Sbjct: 321 EVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKL 380

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   AE++   M +  ++P+  +   ++ GYC+EG +  A      M    + P +V +
Sbjct: 381 GQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTY 440

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N++IKG +D+   D       LM E GV P+ ++  T++D +   G   +   ++ +++ 
Sbjct: 441 NTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILG 500

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G       F+ +  G  + G+  +A ++   M++ G+ P+ + + T+  G+C    +Q 
Sbjct: 501 RGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQE 560

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  I   M    ++ +++ Y +L+ G  + ++     +LL  M+ +G+ P   T   +  
Sbjct: 561 AFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLIS 620

Query: 424 SW 425
            W
Sbjct: 621 GW 622



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 199/447 (44%), Gaps = 72/447 (16%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M     +G    A Y+F+ +   G  P L + + L+  L ++   +  + +  ++   G+
Sbjct: 163 MKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGI 222

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD  + + ++NA  + G VD AM++ +KM   G                          
Sbjct: 223 VPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEG-------------------------- 256

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
                     ++PN  TYN LV  +  +   E    V+  M   G+  + VT   L R Y
Sbjct: 257 ----------LEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGY 306

Query: 181 AQYGETYRAEQMLFEMQNNQVRP-NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
            + G+   AE++L E++ +++   +ER  G++V GYC+ G MEDA+R    M  + +  N
Sbjct: 307 CKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVN 366

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +V+ N+LIKG+  +      ++    M ++ +KPD  +++T++D +   G + K   + +
Sbjct: 367 MVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCE 426

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN--------------- 344
           +M+  GI P +  ++ + KG V  G    A  +   M + GV PN               
Sbjct: 427 EMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMG 486

Query: 345 --------------------VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
                                V F T+ISG C   K+  A +++++M E+G++P+  TY 
Sbjct: 487 DSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYR 546

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGV 411
           TL  GY +      A ++  VME + +
Sbjct: 547 TLSDGYCKNGNVQEAFQIKGVMERQAM 573



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/441 (22%), Positives = 204/441 (46%), Gaps = 7/441 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  +A  +   ++ +G  PT++TY T++  L     +   L L   + + G+ P+ I 
Sbjct: 415 EGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEIS 474

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
              M++   + G+ D AM +++++   G   +T  +NT+I G   +GK  E+  +   M 
Sbjct: 475 CCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRM- 533

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++  + P++ TY  L   +C   +++EA+ +   M    +      YN+L     +  + 
Sbjct: 534 KELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKL 593

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
                +L EMQ   + PN  T G ++SG+C E  ++ A    + M E    PN+VV + +
Sbjct: 594 NDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKI 653

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +     +   D + +A  ++++      +   +   D      L  + Q+I D + K+ I
Sbjct: 654 VSS---LYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDI 710

Query: 307 EPDIH---VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
              +    V++I   G  ++G+  +A S+L+ +   G  P+   + T+I     +  +  
Sbjct: 711 CNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDE 770

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  + ++M E G+ PN+  Y  L+ G  +     RA+ L   + +KG+ P   T  ++  
Sbjct: 771 AFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIG 830

Query: 424 SWRAIGLAREAKRVLKSAEED 444
            +  IG   +A R+ +   E+
Sbjct: 831 CYCRIGDLDKASRLREKMTEE 851



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/414 (23%), Positives = 180/414 (43%), Gaps = 36/414 (8%)

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +KPD   +N +++     G V +A  + ++M   G  PT  TYNT+IKG  +VG  +++L
Sbjct: 398 LKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDAL 457

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            L  LM + + V PN+ +   ++  +      + A  +  +++  G     V +NT+   
Sbjct: 458 HLWHLMVE-RGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISG 516

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G+   A  +   M+   + P+E T   +  GYCK GN+++A +    M+   +  +
Sbjct: 517 LCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSAS 576

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           + ++NSLI G   I+  + V   L  M+  G+ P+VVT+ T++  W     + K   ++ 
Sbjct: 577 IEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYF 636

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY---GVH-------------- 342
           +M++ G  P++ V S +     R     +A  IL  M  +    VH              
Sbjct: 637 EMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTL 696

Query: 343 ------------------PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
                              N +++   I G C + K+  A S+   +   G  P+  TY 
Sbjct: 697 EAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYC 756

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           TL+     +     A +L   M EKG+ P  +    + +    +G    A+R+ 
Sbjct: 757 TLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLF 810



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/412 (23%), Positives = 182/412 (44%), Gaps = 36/412 (8%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV  G   +A ++++ ++E G  P  I+  T++    +       + L  ++   G    
Sbjct: 447 LVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKS 506

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ FN MI+   + G + EA  +F +MK+ G  P   TY TL  GY   G  +E+ ++  
Sbjct: 507 TVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKG 566

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           +M + + +  +   YN L+        + +  +++ +M   G+ P+ VTY TL   +   
Sbjct: 567 VMER-QAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDE 625

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE---LEVH--- 237
            +  +A  + FEM      PN   C  IVS   ++  + +A   L +M +   L VH   
Sbjct: 626 QKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKC 685

Query: 238 -----------------------------PNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
                                         N +V+N  I G       D     L+++  
Sbjct: 686 SDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMS 745

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G  PD  T+ T++ A S +G + +  ++ D+M++ G+ P+I +++ L  G  + G   +
Sbjct: 746 RGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDR 805

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
           A+ +   + + G+ PN V +  +I  +C    + +A  + EKM E GI+  +
Sbjct: 806 AQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTRI 857



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 120/258 (46%), Gaps = 11/258 (4%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P ++TY TL++    +++      L  ++ + G  P+ ++ + ++++      + EA
Sbjct: 607 GLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEA 666

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM-SQDK----NVKPNDRTY 138
             I  KM D       + +N   K    + K + +L+  ++  S DK    N   N+  Y
Sbjct: 667 TVILDKMLDF---DILAVHN---KCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVY 720

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           NI +   C    ++EA +V+  +++ G  PD  TY TL  A +  G    A ++  EM  
Sbjct: 721 NIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLE 780

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
             + PN      +++G CK GN++ A R  Y++ +  + PN V +N LI  +  I D D 
Sbjct: 781 KGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDK 840

Query: 259 VDKALTLMEEFGVKPDVV 276
             +    M E G+   ++
Sbjct: 841 ASRLREKMTEEGISTRII 858


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 206/440 (46%), Gaps = 1/440 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  EA  +F      G     + YTTL+  L +     +      ++    M
Sbjct: 491 VNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD++++N  IN     G   EA  I  +M++ G KP  STYNT+I  +   G+  ++LK
Sbjct: 551 LPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M    ++KPN  TYN LV       ++E+A  ++ +MV++G  P ++T+  + +A 
Sbjct: 611 LLHEMKM-SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQAC 669

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           +Q         +   M N  +  +      ++   C  G    A   L  M    + P+ 
Sbjct: 670 SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDT 729

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + FN+LI G       D        M    + P++ TF+T++    S G +G+   +  +
Sbjct: 730 ITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE 789

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M K+G+EP+   + IL  G+ +     +A  +   M   G  P V  +  +IS +  A  
Sbjct: 790 MEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGM 849

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M +A  +++ M + G++P   TY+ L+ G+   +     ++ L+ M+EKG  P K T+  
Sbjct: 850 MTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSF 909

Query: 421 VADSWRAIGLAREAKRVLKS 440
           +  ++   G+  +A+R+LK+
Sbjct: 910 ICRAFSKPGMTWQAQRLLKN 929



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 213/461 (46%), Gaps = 44/461 (9%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E G  P ++TY TL+    + +   + L +   +  +G++ +  + ++++N   ++G ++
Sbjct: 442 ERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIE 501

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           EAM +F+    SG       Y TLI G    G    + K  Q +  D+N+ P+   YN+ 
Sbjct: 502 EAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQEL-MDRNMLPDAVVYNVF 560

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +   C     +EA +++ +M   G++PD  TYNT+  ++ + GET +A ++L EM+ + +
Sbjct: 561 INCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRM----------------------KELEV--- 236
           +PN  T   +V+G    G +E A   L  M                      + L+V   
Sbjct: 621 KPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILD 680

Query: 237 ----------HPNLVVFNSLIKGFLDIKDSDGVD-KALTLMEEF---GVKPDVVTFSTIM 282
                     H ++ V+N+L    L +    G+  KA  ++EE    G+ PD +TF+ ++
Sbjct: 681 IHEWMMNAGLHADITVYNTL----LQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALI 736

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
                +  +      +  M+   I P+I  F+ L  G    G   +A ++L  M K G+ 
Sbjct: 737 LGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLE 796

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           PN + +  +++G         AM +Y +M   G  P + TY  L+  + +A    +A+EL
Sbjct: 797 PNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL 856

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            + M+++GV P   T  ++   W  I    E K+ LK  +E
Sbjct: 857 FKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKE 897



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 203/459 (44%), Gaps = 42/459 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L  +GK  E        + +      +TYT L+ AL +         ++ ++E+  +
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI 410

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + F+++IN   + G +D+A +  + MK+ G  P   TY TLI G+      + +L+
Sbjct: 411 SPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALE 470

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ------------- 167
           +   M  +  V+ N    + LV        IEEA  +      SG+              
Sbjct: 471 VYHDMLCE-GVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGL 529

Query: 168 ----------------------PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                                 PDAV YN         G+   A+ +L EM+N  ++P++
Sbjct: 530 FKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQ 589

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   ++  +C++G    A++ L+ MK   + PNL+ +N+L+ G      +  V+KA  L
Sbjct: 590 STYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLF---GTGAVEKAKYL 646

Query: 266 MEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           + E    G  P  +T   ++ A S +  +    +I + M+ AG+  DI V++ L +    
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G  +KA  +L  M   G+ P+ + F  +I G C +  +  A + Y +M    I+PN+ T
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           + TLL G     +   A  +L  ME+ G+ P   T  ++
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDIL 805



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 193/445 (43%), Gaps = 36/445 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+   A  + + + E G  P + TYT  +    R K  +    L   + ++G+  D +  
Sbjct: 218 GQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTL 277

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +A++      G   EA  +F++M   G  P   TY TLI      G+ +E L LL  M  
Sbjct: 278 SALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVS 337

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + V  +  TY  L+     +   +E  + +   ++  +  + VTY  L  A  +     
Sbjct: 338 -RGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVD 396

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            AEQ+L EM+   + PN  T   +++G+ K G ++ A  +   MKE  ++PN+V + +LI
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 248 KGFLDIKDSDG--------------------------------VDKALTLMEEF---GVK 272
            GF   +  D                                 +++A+ L ++    G+ 
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            D V ++T++D    AG M    +   +++   + PD  V+++        G+ ++A+SI
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSI 576

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           LT MR  G+ P+   + T+I   C   +  +A+ +  +M    I PNL TY TL+ G   
Sbjct: 577 LTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFG 636

Query: 393 AKQPWRAEELLQVMEEKGVRPKKST 417
                +A+ LL  M   G  P   T
Sbjct: 637 TGAVEKAKYLLNEMVSAGFSPSSLT 661



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 197/445 (44%), Gaps = 13/445 (2%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           RPT + Y  L+AAL+      ++L+   ++ K G+  D +  N ++     +G VD A  
Sbjct: 100 RPTTVAYNILLAALSDHAHAPAVLA---EMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +  +            +NTLI GY  VG    +L +   M+  + +  +   YN LV  +
Sbjct: 157 LADRGGGIHALDVIG-WNTLIAGYCRVGDTPAALSVADRMTA-QGLPMDVVGYNTLVAGF 214

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C    ++ A  V+  M  +G+ P+  TY      Y +      A  +   M  N V  + 
Sbjct: 215 CRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDV 274

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   +V+G C++G   +A      M ++   PN V + +LI           +   L  
Sbjct: 275 VTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGE 334

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV----FSILAKGYV 321
           M   GV  D+VT++ +MD W   G  GK  E+  D ++  +  ++ +    +++L     
Sbjct: 335 MVSRGVVMDLVTYTALMD-W--LGKQGKTDEV-KDTLRFALSDNLSLNGVTYTVLIDALC 390

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           +A    +AE +L  M +  + PNVV F++VI+G+     + +A      M E GINPN+ 
Sbjct: 391 KAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVV 450

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY TL+ G+ + +    A E+   M  +GV   K  +  + +  R  G   EA  + K A
Sbjct: 451 TYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDA 510

Query: 442 EEDRQSMPNKKDEIAVESIHRKQNL 466
                S+ +      ++ + +  ++
Sbjct: 511 SGSGLSLDHVNYTTLIDGLFKAGDM 535



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 111/484 (22%), Positives = 200/484 (41%), Gaps = 71/484 (14%)

Query: 25  HRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAM 84
           H   +I + TL+A   R     + LS+  ++   G+  D + +N ++     +G VD A 
Sbjct: 165 HALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAAR 224

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
            +   MK++G  P  +TY   I  Y      EE+  L + M ++  V  +  T + LV  
Sbjct: 225 GVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRN-GVLLDVVTLSALVAG 283

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM-------- 196
            C      EA+ +  +M   G  P+ VTY TL  + A+ G       +L EM        
Sbjct: 284 LCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMD 343

Query: 197 ---------------QNNQVRPNER------------TCGIIVSGYCKEGNMEDAMRFLY 229
                          + ++V+   R            T  +++   CK  N+++A + L 
Sbjct: 344 LVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLL 403

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            M+E  + PN+V F+S+I GF+     D   +   +M+E G+ P+VVT+ T++D +    
Sbjct: 404 EMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQ 463

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
                 E++ DM+  G+E +  +   L  G  + G+ ++A ++       G+  + V +T
Sbjct: 464 GQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYT 523

Query: 350 TVISG-----------------------------------WCNAVKMQRAMSIYEKMCEI 374
           T+I G                                    C   K + A SI  +M  +
Sbjct: 524 TLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNM 583

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G+ P+  TY T++  +    +  +A +LL  M+   ++P   T   +       G   +A
Sbjct: 584 GLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA 643

Query: 435 KRVL 438
           K +L
Sbjct: 644 KYLL 647



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 1/300 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G G   +A Y+ N ++  G  P+ +T+  ++ A ++ +R   IL +   +   G+  D
Sbjct: 634 LFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHAD 693

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             ++N ++      G   +A  + ++M  SG  P T T+N LI G+      + +     
Sbjct: 694 ITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYA 753

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   +N+ PN  T+N L+    S   I EA  V+ +M  SG++P+ +TY+ L   + + 
Sbjct: 754 QMLH-QNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQ 812

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                A ++  EM      P   T   ++S + K G M  A      M++  VHP    +
Sbjct: 813 SNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTY 872

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           + L+ G+  I++   V K L  M+E G  P   T S I  A+S  G+  + Q +  ++ +
Sbjct: 873 DILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYR 932



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 140/310 (45%), Gaps = 4/310 (1%)

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR 226
           +P  V YN L  A + +     A  +L EM    V  +  T   +++G C+ G ++ A  
Sbjct: 100 RPTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
              R   +    +++ +N+LI G+  + D+         M   G+  DVV ++T++  + 
Sbjct: 157 LADRGGGIHA-LDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFC 215

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
            AG +   + + D M +AG++P++  ++     Y R    ++A  +   M + GV  +VV
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVV 275

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
             + +++G C   +   A +++ +M ++G  PN  TY TL+    +A +      LL  M
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNL 466
             +GV     T   + D     G   E K  L+ A  D  S+      + ++++ +  N+
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNV 395

Query: 467 SASNSTFLQI 476
             +    L++
Sbjct: 396 DEAEQVLLEM 405


>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Cucumis sativus]
          Length = 576

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 181/368 (49%), Gaps = 1/368 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L+E    PT  TY  L+ A  +    +   ++ +++ K G+ P +I++NA I+   + GN
Sbjct: 181 LLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGN 240

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             +A++IF +MK  GC+PTT TY  LI  YG   K   +  +   M + +  KPN  T+ 
Sbjct: 241 NVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEM-RTQRCKPNICTFT 299

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            LV A   +   E+A  +  +M  +G +PD   YN L  +Y++ G  Y A ++   MQ+ 
Sbjct: 300 ALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHM 359

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+  +  I+V  Y + G  EDA      MK + + P +     L+  +    +    
Sbjct: 360 GCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKC 419

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
           +  +  M + G+KPD    +++++ +   G  GK +++F  M K     DI  ++IL   
Sbjct: 420 EDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINV 479

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y RAG  ++ E +   +    + P+VV +T+ I  +      +R + ++EKM + G  P+
Sbjct: 480 YGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPD 539

Query: 380 LKTYETLL 387
             T + LL
Sbjct: 540 GGTAKVLL 547



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 171/359 (47%), Gaps = 1/359 (0%)

Query: 55  VEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK 114
           + K   +PD I++N +++A  +     +    + ++ +S C PT  TY  L+K Y   G 
Sbjct: 146 MNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 205

Query: 115 PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYN 174
            E++  +   M +   + P+   YN  +       +  +A  + ++M   G QP   TY 
Sbjct: 206 LEKAEAVFAEMRK-YGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYT 264

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
            L   Y +  +++ A+ +  EM+  + +PN  T   +V+   +EG  E A     +M+E 
Sbjct: 265 MLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEA 324

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
              P++  +N+L++ +       G  +  +LM+  G +PD  +++ ++DA+  AGL    
Sbjct: 325 GYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDA 384

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
           Q +F++M + GI P +    +L   Y  AG   K E I+  M K G+ P+  +  ++++ 
Sbjct: 385 QAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNL 444

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           +    +  +   ++  M +     ++ TY  L+  YG A    R EEL Q++  K + P
Sbjct: 445 YGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEP 503



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 168/367 (45%), Gaps = 12/367 (3%)

Query: 90  MKDSGCKPTTSTYNTLIKGYG--NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
           M  S  +P    YN L+  YG  ++ K  ES  L  L S   +  P + TY +L++A+C 
Sbjct: 146 MNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLES---HCIPTEDTYALLLKAYCK 202

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
              +E+A  V  +M   G+ P A+ YN       + G   +A ++   M+ +  +P   T
Sbjct: 203 SGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDT 262

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
             ++++ Y KE     A      M+     PN+  F +L+         +  ++    M+
Sbjct: 263 YTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQ 322

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
           E G +PDV  ++ +M+++S AG      EIF  M   G EPD   ++I+   Y RAG  +
Sbjct: 323 EAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHE 382

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            A+++   M++ G+ P +     ++S + +A  + +   I  +M + G+ P+     ++L
Sbjct: 383 DAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSML 442

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS 447
             YG   Q  + E+L   M++   R   ST  ++ + +   G        ++  EE  Q 
Sbjct: 443 NLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGF-------VERMEELFQL 495

Query: 448 MPNKKDE 454
           +P K  E
Sbjct: 496 LPAKNLE 502



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 163/338 (48%), Gaps = 36/338 (10%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+   + K H A  IF+ +  +  +P + T+T LV AL R+   +    +  ++++ G 
Sbjct: 267 INVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGY 326

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD   +NA++ + S +G    A +IF  M+  GC+P  ++YN ++  YG  G  E++  
Sbjct: 327 EPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQA 386

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M +   + P  +++ +L+ A+ S  ++ +  +++ +M  SG++PD    N++   Y
Sbjct: 387 VFEEMKR-IGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLY 445

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+  + E +   MQ    R +  T  I+++ Y + G       F+ RM+EL      
Sbjct: 446 GRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAG-------FVERMEEL------ 492

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
                                   L+    ++PDVVT+++ + A+S   L  +C E+F+ 
Sbjct: 493 ----------------------FQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEK 530

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           M+ AG  PD     +L        + ++  +++ +M K
Sbjct: 531 MIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHK 568



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 89/179 (49%)

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
           +M +   +PDV+ ++ +MDA+    L    +  + +++++   P    +++L K Y ++G
Sbjct: 145 IMNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSG 204

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
             +KAE++   MRKYG+ P+ +++   I G        +A+ I+ +M   G  P   TY 
Sbjct: 205 LLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYT 264

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            L+  YG+  +   A+ +   M  +  +P   T   + ++    GL  +A+ + +  +E
Sbjct: 265 MLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQE 323



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/113 (21%), Positives = 51/113 (45%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F+ + +   R  + TY  L+    R    + +  L   +    ++PD + + + I A S
Sbjct: 457 LFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYS 516

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
                   +++F+KM D+GC P   T   L+    +  + E+   +++ M +D
Sbjct: 517 RKKLYKRCLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHKD 569


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 197/390 (50%), Gaps = 6/390 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L  KG+  EA  +++  + +G     + Y TL+  L +  + +  + L+ K+EK G+
Sbjct: 133 MKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGV 192

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ I++N +++   + G V EA  +  +M   G      TYN+LI G+   G+ + +++
Sbjct: 193 RPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVR 252

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M   ++V+P+  T+NILV A C    + EA NV   M+  G++PD V+ N L   +
Sbjct: 253 LLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGW 312

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A+++   M      PN  +   +++GYCK   +++A+R L  M +  + P+ 
Sbjct: 313 CLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDT 372

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +N L+ G   +  S  V     L+E     G  PD++T++ ++D +     + K   +
Sbjct: 373 VTYNCLLDG---LSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALAL 429

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F  +V  GI P+I  ++IL  G  + G  + A+ I   +   G  PN+  +  +I+G   
Sbjct: 430 FQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRR 489

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
              +  A ++  +M + G  PN  T++ L+
Sbjct: 490 EGLLDEAEALLLEMVDDGFPPNAVTFDPLV 519



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 197/405 (48%), Gaps = 2/405 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P+L+T +  + +LT   +     S+++K+ K G   D      ++      G   EA+ 
Sbjct: 88  KPSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALN 147

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           ++      G       Y TLI G   +GK  ++++LL+ M +   V+PN   YN++V   
Sbjct: 148 LYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKG-GVRPNLIMYNMVVDGL 206

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM-QNNQVRPN 204
           C +  + EA  +  +MV  GI  D  TYN+L   +   G+   A ++L EM     VRP+
Sbjct: 207 CKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPD 266

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T  I+V   CK G + +A      M +  + P++V  N+L+ G+          +   
Sbjct: 267 VYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFD 326

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M E G  P+V+++ST+++ +    ++ +   +  +M +  + PD   ++ L  G  ++G
Sbjct: 327 RMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSG 386

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
                  ++ +MR  G  P+++ +  ++  +     + +A+++++ + + GI+PN++TY 
Sbjct: 387 RVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYN 446

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
            L+ G  +  +   A+E+ Q++  KG RP   T  ++ +  R  G
Sbjct: 447 ILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREG 491



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 193/420 (45%), Gaps = 2/420 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+   A  +   +++ G      T TTL+  L  + R    L+L       G 
Sbjct: 98  INSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGF 157

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D + +  +IN   + G   +A+++ +KM+  G +P    YN ++ G    G   E+  
Sbjct: 158 SFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACG 217

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVA-SGIQPDAVTYNTLARA 179
           L   M   K +  +  TYN L+  +C     + A  ++ +MV    ++PD  T+N L  A
Sbjct: 218 LCSEMV-GKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDA 276

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G    A  +   M    + P+  +C  +++G+C  G M +A     RM E    PN
Sbjct: 277 LCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPN 336

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           ++ +++LI G+  +K  D   + LT M +  + PD VT++ ++D  S +G +    ++ +
Sbjct: 337 VISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVE 396

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            M  +G  PD+  +++L   Y++     KA ++   +   G+ PN+  +  +I G C   
Sbjct: 397 AMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGG 456

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           +M+ A  I++ +   G  PN++TY  ++ G         AE LL  M + G  P   T  
Sbjct: 457 RMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFD 516



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 184/402 (45%), Gaps = 40/402 (9%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGM-KPDSILFNAMINACSESGNVDEAMK 85
           P++++   L++++ + K + +++SL S ++  G  KP  +  +  IN+ +  G +  A  
Sbjct: 53  PSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFS 112

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +  K+   G      T  TL+KG                                     
Sbjct: 113 VMAKIVKRGFGVDPFTLTTLMKG------------------------------------L 136

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C K    EA N+    V+ G   D V Y TL     + G+T  A ++L +M+   VRPN 
Sbjct: 137 CLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNL 196

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT- 264
               ++V G CKEG + +A      M    +  ++  +NSLI GF       G  + L  
Sbjct: 197 IMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNE 256

Query: 265 -LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            +M+E  V+PDV TF+ ++DA    G++ + + +F  M+K G+EPD+   + L  G+   
Sbjct: 257 MVMKE-DVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLR 315

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G   +A+ +   M + G  PNV+ ++T+I+G+C    +  A+ +  +M +  + P+  TY
Sbjct: 316 GCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTY 375

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
             LL G  ++ +     +L++ M   G  P   T  ++ D +
Sbjct: 376 NCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDY 417



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 136/281 (48%), Gaps = 2/281 (0%)

Query: 6   GKGKPHEAHYIFNCLI-EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           G G+   A  + N ++ +E  RP + T+  LV AL +        ++   + K G++PD 
Sbjct: 243 GAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDV 302

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           +  NA++N     G + EA ++F +M + G  P   +Y+TLI GY  V   +E+L+LL  
Sbjct: 303 VSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTE 362

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M Q +N+ P+  TYN L+        +   W++V  M ASG  PD +TYN L   Y +  
Sbjct: 363 MHQ-RNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRE 421

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
              +A  +   + +  + PN RT  I++ G CK G M+ A      +      PN+  +N
Sbjct: 422 CLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYN 481

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
            +I G       D  +  L  M + G  P+ VTF  ++ A 
Sbjct: 482 IMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRAL 522



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 138/294 (46%), Gaps = 2/294 (0%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISK-VEKDGMKPDSILFNAMINACSESGNVDEAMKIF 87
           + TY +L+       +F+  + L+++ V K+ ++PD   FN +++A  + G V EA  +F
Sbjct: 231 VFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVF 290

Query: 88  QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
             M   G +P   + N L+ G+   G   E+ ++   M +   + PN  +Y+ L+  +C 
Sbjct: 291 GLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKL-PNVISYSTLINGYCK 349

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
              ++EA  ++ +M    + PD VTYN L    ++ G       ++  M+ +   P+  T
Sbjct: 350 VKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLIT 409

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
             +++  Y K   ++ A+     + +  + PN+  +N LI G           +   L+ 
Sbjct: 410 YNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLS 469

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
             G +P++ T++ +++     GL+ + + +  +MV  G  P+   F  L +  +
Sbjct: 470 VKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRALL 523



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 108/262 (41%), Gaps = 43/262 (16%)

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK------------DSDGVDK--- 261
           K    +DA+   +RM  L   P++V  N L+   +  K            DS G  K   
Sbjct: 32  KTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSL 91

Query: 262 ------------------ALTLMEE-----FGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
                             A ++M +     FGV P   T +T+M      G   +   ++
Sbjct: 92  VTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDP--FTLTTLMKGLCLKGRTFEALNLY 149

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           D  V  G   D   +  L  G  + G+ + A  +L  M K GV PN++M+  V+ G C  
Sbjct: 150 DHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKE 209

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ--VMEEKGVRPKKS 416
             +  A  +  +M   GI  ++ TY +L+ G+  A Q   A  LL   VM+E  VRP   
Sbjct: 210 GLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKED-VRPDVY 268

Query: 417 TIQLVADSWRAIGLAREAKRVL 438
           T  ++ D+   +G+  EA+ V 
Sbjct: 269 TFNILVDALCKLGMVAEARNVF 290


>gi|303276340|ref|XP_003057464.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226461816|gb|EEH59109.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 691

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/453 (24%), Positives = 193/453 (42%), Gaps = 77/453 (16%)

Query: 10  PHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNA 69
           P       + L  +GHRPT  TYT L+  +      +    ++ ++   G  PD+  FNA
Sbjct: 129 PEAPWAAIDGLRADGHRPTFKTYTALITCVGELGTPRDAEVVLDRMRDAGESPDARAFNA 188

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK 129
           + +A   + +   A ++ ++M   G +P  +TY  ++  Y   G       ++  +  D 
Sbjct: 189 VAHAWCAADDPRSAERVVERMLGEGVRPNDATYPEIVHAYAKAGATSRVEAVISRIESDA 248

Query: 130 N-VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
             +   ++ Y+  VR  C     E+A  V+                          E +R
Sbjct: 249 GELALGEKVYHAFVRGCCDGGRPEDAERVI--------------------------ERWR 282

Query: 189 AEQMLFEMQNNQ----VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
            EQ   E   ++     +P   + G+I+  Y ++G M DA R L +M+   V P++ VFN
Sbjct: 283 YEQFDMERVADKKGAICKPVAASYGMIIDHYARDGRMGDARRLLNQMQWDNVAPSIDVFN 342

Query: 245 SLIKGFLDIKDSDGVDKALTL--------MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            L++G+L I +                  ME  G++PDVV++++++D W++ G     ++
Sbjct: 343 MLLRGYLAIGNVGAAQDVFRELEGGGTWDMESLGIEPDVVSYTSLLDHWAAVGDAELAEK 402

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV--------------- 341
           +   M+  G+ PD+  F  L K + RAG+P+ AE +L  MR++                 
Sbjct: 403 VLSKMIAKGVTPDLRTFGALVKAHARAGDPESAEDVLRRMREFDAPAEKRRGGGGRGGGA 462

Query: 342 -----------------------HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
                                   PNVV+++TV+S + +  +M+ A  +  +M   G+ P
Sbjct: 463 GGKKKAPPANANAKTAAAARKKLKPNVVLYSTVVSAYASRGEMREAKRVIAQMPADGVKP 522

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           N +TY  L+WGYG            + M E GV
Sbjct: 523 NDRTYGHLVWGYGSLGDVAGITASARAMAEDGV 555


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 205/453 (45%), Gaps = 44/453 (9%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P +++Y TL+  L + K+ K  + L+ ++E  G  P+S+    +++   + G +DEAM++
Sbjct: 31  PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 90

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            + MK  G       Y TLI G+ N G  +   +L   M   K +  N  TY+ LV   C
Sbjct: 91  LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM-LGKGISANVVTYSCLVHGLC 149

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                +EA  V+  M   GI PD VTY  L     + G    A  +L  M      P+  
Sbjct: 150 RLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNV 209

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T  +++SG CKEG + DA + L  M E     ++V +N+L+KG     D   VD+AL L 
Sbjct: 210 TYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLC---DKGKVDEALKLF 266

Query: 267 -----EEFGVKPDVVTFSTIMDAWSSAG--------------------------LMGKC- 294
                 E  ++P+V TF+ ++      G                          L+G C 
Sbjct: 267 NSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCL 326

Query: 295 --------QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
                    E++  ++  G  P+   +SIL  G+ +      A+ +   MR +G++P + 
Sbjct: 327 KAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALF 386

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            + T+++  C    +++A S++++M      P++ ++ T++ G  +A      +EL   M
Sbjct: 387 DYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKM 446

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            E G+RP   T   + +    +G   EAK  L+
Sbjct: 447 VEMGLRPDALTFSTLINRLSKLGELDEAKSALE 479



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 201/400 (50%), Gaps = 7/400 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA+ + N + E G  P ++TYT L+  L +  R    + L++ + + G +P ++ +
Sbjct: 152 GQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTY 211

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +++   + G V +A KI + M + G K    TYNTL+KG  + GK +E+LKL   M  
Sbjct: 212 NVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFD 271

Query: 128 DKN-VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++N ++PN  T+N+L+   C +  + +A  +  KMV  G   + VTYN L     + G+ 
Sbjct: 272 NENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKI 331

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++  ++ +    PN  T  I++ G+CK   +  A      M+   ++P L  +N+L
Sbjct: 332 KEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTL 391

Query: 247 IKGFLDIKDSDGVDKALTLMEEFG---VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           +     +     +++A +L +E G    +PD+++F+T++D    AG     +E+   MV+
Sbjct: 392 MA---SLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVE 448

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ PD   FS L     + GE  +A+S L  M   G  P+ +++ +++ G  +      
Sbjct: 449 MGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTE 508

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
            +++  +M   G   + K   T+L     + Q     ELL
Sbjct: 509 IINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 548



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 191/383 (49%), Gaps = 7/383 (1%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           ++  L R       + LI ++ +  + PD + +N +IN   ++  + EA+ +  +M+ +G
Sbjct: 4   VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
           C P + T  TL+ G    G+ +E+++LL+ M + K    +   Y  L+  +C+  +++  
Sbjct: 64  CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKK-KGFDADVVLYGTLISGFCNNGNLDRG 122

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
             +  +M+  GI  + VTY+ L     + G+   A  +L  M  + + P+  T   ++ G
Sbjct: 123 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 182

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD--KALTLMEEFGVK 272
            CK+G    AM  L  M E    P+ V +N L+ G    K+   +D  K L +M E G K
Sbjct: 183 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGL--CKEGLVIDAFKILRMMIEKGKK 240

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMV--KAGIEPDIHVFSILAKGYVRAGEPQKAE 330
            DVVT++T+M      G + +  ++F+ M   +  +EP++  F++L  G  + G   KA 
Sbjct: 241 ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAV 300

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            I   M K G   N+V +  ++ G   A K++ AM +++++ ++G  PN  TY  L+ G+
Sbjct: 301 KIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 360

Query: 391 GEAKQPWRAEELLQVMEEKGVRP 413
            + +    A+ L   M   G+ P
Sbjct: 361 CKMRMLNIAKGLFCEMRTHGLNP 383



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 198/442 (44%), Gaps = 48/442 (10%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD-- 81
           G  P  +T TTL+  L +  R    + L+  ++K G   D +L+  +I+    +GN+D  
Sbjct: 63  GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRG 122

Query: 82  ---------------------------------EAMKIFQKMKDSGCKPTTSTYNTLIKG 108
                                            EA  +   M + G  P   TY  LI G
Sbjct: 123 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 182

Query: 109 YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP 168
               G+   ++ LL LM + K  +P++ TYN+L+   C +  + +A+ ++  M+  G + 
Sbjct: 183 LCKDGRATHAMDLLNLMVE-KGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ--VRPNERTCGIIVSGYCKEGNMEDAMR 226
           D VTYNTL +     G+   A ++   M +N+  + PN  T  +++ G CKEG +  A++
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMD 283
              +M +     NLV +N L+ G L    +  + +A+ L   + + G  P+  T+S ++D
Sbjct: 302 IHRKMVKKGSCGNLVTYNMLLGGCLK---AGKIKEAMELWKQVLDLGFVPNSFTYSILID 358

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
            +    ++   + +F +M   G+ P +  ++ L     + G  ++A+S+   M      P
Sbjct: 359 GFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEP 418

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           +++ F T+I G   A   Q    +  KM E+G+ P+  T+ TL+    +  +   A+  L
Sbjct: 419 DIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSAL 478

Query: 404 QVMEEKGVRPKKSTIQLVADSW 425
           + M   G  P      LV DS 
Sbjct: 479 ERMVASGFTPD----ALVYDSL 496



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 194/405 (47%), Gaps = 3/405 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G       +F+ ++ +G    ++TY+ LV  L R  ++K   ++++ + + G+ PD + +
Sbjct: 117 GNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTY 176

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+   + G    AM +   M + G +P+  TYN L+ G    G   ++ K+L++M +
Sbjct: 177 TGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIE 236

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV--ASGIQPDAVTYNTLARAYAQYGE 185
            K  K +  TYN L++  C K  ++EA  +   M    + ++P+  T+N L     + G 
Sbjct: 237 -KGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGR 295

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
             +A ++  +M       N  T  +++ G  K G +++AM    ++ +L   PN   ++ 
Sbjct: 296 LTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSI 355

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           LI GF  ++  +        M   G+ P +  ++T+M +    G + + + +F +M  A 
Sbjct: 356 LIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNAN 415

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
            EPDI  F+ +  G ++AG+ Q  + +   M + G+ P+ + F+T+I+      ++  A 
Sbjct: 416 CEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAK 475

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           S  E+M   G  P+   Y++LL G            LL  M  KG
Sbjct: 476 SALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 520



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 173/371 (46%), Gaps = 8/371 (2%)

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++     +G V EAM + ++M      P   +YNTLI G     K +E++ LL  M +
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM-E 60

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                PN  T   L+   C    ++EA  ++  M   G   D V Y TL   +   G   
Sbjct: 61  AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           R +++  EM    +  N  T   +V G C+ G  ++A   L  M E  +HP++V +  LI
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180

Query: 248 KGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
            G   D + +  +D  L LM E G +P  VT++ ++      GL+    +I   M++ G 
Sbjct: 181 DGLCKDGRATHAMD-LLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK 239

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSM--RKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           + D+  ++ L KG    G+  +A  +  SM   +  + PNV  F  +I G C   ++ +A
Sbjct: 240 KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKA 299

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           + I+ KM + G   NL TY  LL G  +A +   A EL + + + G  P   T  ++ D 
Sbjct: 300 VKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDG 359

Query: 425 W---RAIGLAR 432
           +   R + +A+
Sbjct: 360 FCKMRMLNIAK 370



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 175/377 (46%), Gaps = 5/377 (1%)

Query: 103 NTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV 162
           N ++KG    G   E++ L++ M + K+V P+  +YN L+   C    ++EA  ++ +M 
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGR-KSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60

Query: 163 ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNME 222
           A+G  P++VT  TL     + G    A ++L  M+      +    G ++SG+C  GN++
Sbjct: 61  AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120

Query: 223 DAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIM 282
                   M    +  N+V ++ L+ G   +      +  L  M E G+ PDVVT++ ++
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
           D     G      ++ + MV+ G EP    +++L  G  + G    A  IL  M + G  
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK 240

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMC--EIGINPNLKTYETLLWGYGEAKQPWRAE 400
            +VV + T++ G C+  K+  A+ ++  M   E  + PN+ T+  L+ G  +  +  +A 
Sbjct: 241 ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAV 300

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKD-EIAVES 459
           ++ + M +KG      T  ++       G  +EA  + K    D   +PN     I ++ 
Sbjct: 301 KIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQV-LDLGFVPNSFTYSILIDG 359

Query: 460 IHRKQNLSASNSTFLQI 476
             + + L+ +   F ++
Sbjct: 360 FCKMRMLNIAKGLFCEM 376



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 113/231 (48%), Gaps = 5/231 (2%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N+L+G     GK  EA  ++  +++ G  P   TY+ L+    + +       L  ++  
Sbjct: 319 NMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRT 378

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+ P    +N ++ +  + G++++A  +FQ+M ++ C+P   ++NT+I G    G  + 
Sbjct: 379 HGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQ- 437

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
            +K LQ+   +  ++P+  T++ L+        ++EA + + +MVASG  PDA+ Y++L 
Sbjct: 438 FVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLL 497

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           +  +  G+T     +L +M       + +    I++  C      D M  L
Sbjct: 498 KGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 548



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L  +G   +A  +F  +      P +I++ T++    +   F+ +  L  K+ + G+
Sbjct: 392 MASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGL 451

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD++ F+ +IN  S+ G +DEA    ++M  SG  P    Y++L+KG  + G   E + 
Sbjct: 452 RPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIIN 511

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
           LL  M+    V        IL    C  +SI+E
Sbjct: 512 LLHQMAAKGTVLDRKIVSTILT---CLCHSIQE 541


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 210/426 (49%), Gaps = 11/426 (2%)

Query: 2   NILV-GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           N+L+ G  K  E       L   G  P   TY  ++ +L  + + K  + ++ +  +   
Sbjct: 153 NVLISGYCKSGEIEEALRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKC 212

Query: 61  KPDSILFNAMINA-CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
            PD +    +I+A C ESG V +AMK+F +M++ GCKP   TYN LIKG+   G+ +E++
Sbjct: 213 YPDVVTCTVLIDATCKESG-VGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAI 271

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           + L+ +      +P+  ++N+++R+ CS     +A  ++  M+  G  P  VT+N L   
Sbjct: 272 RFLKKLPS-YGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINF 330

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             Q G   +A  +L  M  +   PN R+   ++ G+C    ++ A+ +L  M     +P+
Sbjct: 331 LCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPD 390

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           +V +N L+      KD   VD A+ ++ +    G  P +++++T++D     G      E
Sbjct: 391 IVTYNILLTAL--CKDGK-VDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVE 447

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           + ++M   G++PD+   + +  G  R G+ ++A      ++++ + PN  ++ ++I+G C
Sbjct: 448 LLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLC 507

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
            + +   A+     M   G  P   TY TL+ G         A +L   +  +G+  K+S
Sbjct: 508 KSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGL-VKRS 566

Query: 417 TIQLVA 422
            ++ V+
Sbjct: 567 LVEKVS 572



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 205/430 (47%), Gaps = 4/430 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+   A  I   L E G    + +Y  L++   +    +  L ++ ++   G+ P++  +
Sbjct: 128 GRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATY 184

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +A++ +  + G + +AM++  +   S C P   T   LI          +++KL   M +
Sbjct: 185 DAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEM-R 243

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +K  KP+  TYN+L++ +C    ++EA   + K+ + G QPD +++N + R+    G   
Sbjct: 244 NKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWM 303

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++L  M      P+  T  I+++  C++G +  A+  L  M +    PN   FN LI
Sbjct: 304 DAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLI 363

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           +GF + K  D   + L +M   G  PD+VT++ ++ A    G +     I   +   G  
Sbjct: 364 QGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCS 423

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P +  ++ +  G ++ G+ + A  +L  M   G+ P+++  T+V+ G     K++ AM  
Sbjct: 424 PSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKF 483

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           +  +    I PN   Y +++ G  +++Q   A + L  M  KG +P ++T   +      
Sbjct: 484 FHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITY 543

Query: 428 IGLAREAKRV 437
            GLA +A ++
Sbjct: 544 EGLAEDASKL 553



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 184/378 (48%), Gaps = 4/378 (1%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G  PD I   A+I    + G    A +I   +++SG     ++YN LI GY   G+ EE+
Sbjct: 109 GKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEA 168

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           L++L  M     V PN  TY+ ++ + C +  +++A  V+ + + S   PD VT   L  
Sbjct: 169 LRVLDRM----GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLID 224

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           A  +     +A ++  EM+N   +P+  T  +++ G+CK G +++A+RFL ++      P
Sbjct: 225 ATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQP 284

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           +++  N +++            K L  M   G  P VVTF+ +++     GL+GK   + 
Sbjct: 285 DVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVL 344

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           + M K G  P+   F+ L +G+       +A   L  M   G +P++V +  +++  C  
Sbjct: 345 EMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKD 404

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            K+  A+ I  ++   G +P+L +Y T++ G  +  +   A ELL+ M  KG++P   T 
Sbjct: 405 GKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITC 464

Query: 419 QLVADSWRAIGLAREAKR 436
             V       G  REA +
Sbjct: 465 TSVVGGLSREGKVREAMK 482



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/332 (23%), Positives = 143/332 (43%), Gaps = 38/332 (11%)

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +R       +EE    +  M   G  PD +    L R + + G T  A Q++  ++ +  
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
             +  +  +++SGYCK G +E+A+R L RM    V PN   +++++    D        +
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRMG---VSPNAATYDAVLCSLCDRGKLKQAMQ 202

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            L    +    PDVVT + ++DA      +G+  ++F++M   G +PD+  +++L KG+ 
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFC 262

Query: 322 RAGEPQKAESILTSMRKYGVHPN-----------------------------------VV 346
           + G   +A   L  +  YG  P+                                   VV
Sbjct: 263 KGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVV 322

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            F  +I+  C    + +A+++ E M + G  PN +++  L+ G+   K   RA E L++M
Sbjct: 323 TFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIM 382

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             +G  P   T  ++  +    G   +A  +L
Sbjct: 383 VSRGCYPDIVTYNILLTALCKDGKVDDAVVIL 414



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 1/227 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  KG   +A  +   + + GH P   ++  L+      K     +  +  +   G 
Sbjct: 328 INFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGC 387

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + +N ++ A  + G VD+A+ I  ++   GC P+  +YNT+I G   VGK E +++
Sbjct: 388 YPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVE 447

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M   K +KP+  T   +V     +  + EA    + +    I+P+A  YN++    
Sbjct: 448 LLEEMCY-KGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGL 506

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
            +  +T  A   L +M     +P E T   ++ G   EG  EDA + 
Sbjct: 507 CKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKL 553



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 117/262 (44%), Gaps = 3/262 (1%)

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
           R   + GE     + L  M N    P+   C  ++  +CK G  ++A + +  ++E    
Sbjct: 87  RRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAV 146

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
            ++  +N LI G+     S  +++AL +++  GV P+  T+  ++ +    G + +  ++
Sbjct: 147 IDVTSYNVLISGYCK---SGEIEEALRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQV 203

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
               +++   PD+   ++L     +     +A  +   MR  G  P+VV +  +I G+C 
Sbjct: 204 LGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCK 263

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             ++  A+   +K+   G  P++ ++  +L       +   A +LL  M  KG  P   T
Sbjct: 264 GGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVT 323

Query: 418 IQLVADSWRAIGLAREAKRVLK 439
             ++ +     GL  +A  VL+
Sbjct: 324 FNILINFLCQKGLLGKALNVLE 345


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 205/430 (47%), Gaps = 6/430 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A   F  + E G +P++  Y  ++ AL  + +F+ I  + + +++DG++ +   +
Sbjct: 122 GLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTY 181

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++ A  ++  VD A K+  +M   GC P   +Y T++     +GK EE+ +L      
Sbjct: 182 NMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAREL------ 235

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              +K     YN L+  +C ++ +EE + +  +M   GI PD +TY+T+    ++ G   
Sbjct: 236 SMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVE 295

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +L +M      PN  T   ++ GY   G + +A+    RM +    PN V +N+LI
Sbjct: 296 MALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLI 355

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G                ME  GV P+  T+ST++D ++ AG +    EI++ M+  G  
Sbjct: 356 HGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCL 415

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P++ V++ +     R      A  ++ +M      PN + F T I G C + K + AM +
Sbjct: 416 PNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKV 475

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
             +M + G  PN+ TY  +L G   AK+   A +++  +EE  ++    T   +   +  
Sbjct: 476 LNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCH 535

Query: 428 IGLAREAKRV 437
            G+ + A ++
Sbjct: 536 AGMFKGALQI 545



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 189/394 (47%), Gaps = 37/394 (9%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           Y  L+    R+ + + +  L +++  +G+ PD I ++ +IN  SE GNV+ A+ +  KM 
Sbjct: 246 YNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMF 305

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
             GC P   T+ +L+KGY   G+  E+L L   M Q+ + +PN   YN L+   CS   +
Sbjct: 306 LRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGS-EPNTVAYNTLIHGLCSYGKM 364

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ-------------------- 191
            EA +V  KM  +G+ P+  TY+TL   +A+ G+   A +                    
Sbjct: 365 VEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCM 424

Query: 192 ---------------MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
                          ++  M N    PN  T    + G C  G  E AM+ L +M++   
Sbjct: 425 VDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGC 484

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            PN+  +N ++ G  + K +    + +  +EE  +K ++VT++TI+  +  AG+     +
Sbjct: 485 APNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQ 544

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV-HPNVVMFTTVISGW 355
           I   ++  G +PD   ++ +   Y + GE + A  ++  + K G  +P+V  +T+++ G 
Sbjct: 545 IAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGV 604

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           CN + +  A+   +KM   GI PN  T+  L+ G
Sbjct: 605 CNWIGVDEAVVHLDKMINEGICPNRATWNALVRG 638



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 184/399 (46%), Gaps = 43/399 (10%)

Query: 25  HRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAM 84
           H P  +TYTT++  L  ++    I  L+  ++ +G+  +  LF  +INA   +G  ++A+
Sbjct: 71  HTP--LTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQAL 128

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
           K F ++ + GCKP+   YN ++    +  K +    +   M +D  ++ N  TYN+L++A
Sbjct: 129 KTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRD-GIELNVYTYNMLLKA 187

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
            C  + ++ A  ++ +M   G  PDAV+Y T                             
Sbjct: 188 LCKNDRVDAARKLLAEMSYKGCIPDAVSYTT----------------------------- 218

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
                 +VS  C+ G +E+A     R+K       + V+N+LI GF      + V +   
Sbjct: 219 ------VVSSMCRLGKVEEARELSMRIKSF-----VPVYNALINGFCREHKMEEVFELFN 267

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M   G+ PDV+T+ST+++  S  G +     +   M   G  P++H F+ L KGY   G
Sbjct: 268 EMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGG 327

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              +A  +   M + G  PN V + T+I G C+  KM  A+S+ +KM   G+ PN  TY 
Sbjct: 328 RLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYS 387

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           TL+ G+ +A     A E+   M   G  P       + D
Sbjct: 388 TLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVD 426



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/391 (22%), Positives = 153/391 (39%), Gaps = 67/391 (17%)

Query: 70  MINACSESGNVDEAMKIFQKMKDSGC-KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           ++N      N+  A+  F+ + +S   K T  TY T+IK  G     +    LLQLM  +
Sbjct: 43  VLNKLKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLE 102

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
             +  N+  + I++ A+      E+A    Y++   G +P    YN +  A     +   
Sbjct: 103 -GISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKF-- 159

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
             QM+  + NN                               MK   +  N+  +N L+K
Sbjct: 160 --QMINGIYNN-------------------------------MKRDGIELNVYTYNMLLK 186

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG------------------- 289
                   D   K L  M   G  PD V+++T++ +    G                   
Sbjct: 187 ALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVY 246

Query: 290 ---LMGKCQ--------EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
              + G C+        E+F++M   GI+PD+  +S +       G  + A ++L  M  
Sbjct: 247 NALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFL 306

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            G  PNV  FT+++ G+    ++  A+ ++ +M + G  PN   Y TL+ G     +   
Sbjct: 307 RGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVE 366

Query: 399 AEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           A  + Q ME  GV P ++T   + D +   G
Sbjct: 367 AVSVSQKMERNGVFPNETTYSTLIDGFAKAG 397



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 90/176 (51%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK   A  + N + + G  P + TY  ++  L   KR +  L ++ ++E+  +K +
Sbjct: 463 LCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSN 522

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +++    +G    A++I  K+   G KP + TYNT+I  Y   G+ + +++L+ 
Sbjct: 523 LVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVD 582

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            +++     P+  TY  L+   C+   ++EA   + KM+  GI P+  T+N L R 
Sbjct: 583 RLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRG 638



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 6/217 (2%)

Query: 223 DAMRFLYRMKELE-VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
           D +++L ++ +LE +  N  +F  +I  +     ++   K    + EFG KP V  ++ +
Sbjct: 90  DGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHV 149

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +DA  S         I+++M + GIE +++ +++L K   +      A  +L  M   G 
Sbjct: 150 LDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGC 209

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
            P+ V +TTV+S  C   K++ A  +      + I   +  Y  L+ G+    +     E
Sbjct: 210 IPDAVSYTTVVSSMCRLGKVEEAREL-----SMRIKSFVPVYNALINGFCREHKMEEVFE 264

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           L   M  +G+ P   T   V ++   +G    A  VL
Sbjct: 265 LFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVL 301



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 4/142 (2%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +  L+TY T+++       FK  L +  K+   G KPDSI +N +I A  + G V  A++
Sbjct: 520 KSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQ 579

Query: 86  IFQKMKDSG-CKPTTSTYNTLIKGYGN-VGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +  ++   G   P   TY +L+ G  N +G  E  + L +++++   + PN  T+N LVR
Sbjct: 580 LVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINE--GICPNRATWNALVR 637

Query: 144 AWCSKNSIEEAWNVVYKMVASG 165
              SK       ++V  ++A+G
Sbjct: 638 GLFSKLGHLGPIHIVDNILANG 659


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 184/363 (50%), Gaps = 6/363 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P +  Y  L+ AL R+    +++ +   + K G+ P+   +N +I A  ++  VD A K+
Sbjct: 120 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 179

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M   GC P   ++ T++ G   +G+ EE+   L          P   +YN +V A C
Sbjct: 180 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFL------AETVPVQASYNAVVHALC 233

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            +  + E ++VV +MV  G+QP+ VTY T+  A+ +  E   A  +L  M +    PN  
Sbjct: 234 GEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVL 293

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   +V G+ ++G + DA+   + M +    P+ + +N LI+G   I D  G       M
Sbjct: 294 TFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSM 353

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           +   + P+  T+ST++D +S+AG +     I+++M  +G +P++ V++ +     +    
Sbjct: 354 KRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMF 413

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +AES++  M      PN V F T+I   C+  ++ RA++++  M   G +PN +TY  L
Sbjct: 414 DQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNEL 473

Query: 387 LWG 389
           L G
Sbjct: 474 LHG 476



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 181/384 (47%), Gaps = 1/384 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G+ +  E   + N +++ G +P ++TYTT+V A  + +  +   ++++++   G  P+
Sbjct: 232 LCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPN 291

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + F A++    E G V +A+ ++  M D G  P+T +YN LI+G   +G  + +L    
Sbjct: 292 VLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFN 351

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M ++  + PN  TY+ LV  + +   ++ A  +  +M +SG +P+ V Y  +     + 
Sbjct: 352 SMKRNA-LLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKK 410

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
               +AE ++ +M  +   PN  T   ++   C  G +  A+   + M+    HPN   +
Sbjct: 411 MMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTY 470

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N L+ G     +       +  M   G +  +VT++T+++      +      +   M+ 
Sbjct: 471 NELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMV 530

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GI+PD   F+ +   Y + G+   A  +L  M       NVV +T +IS  CN  K+  
Sbjct: 531 QGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSN 590

Query: 364 AMSIYEKMCEIGINPNLKTYETLL 387
           AM    KM   GI PN  T+  L+
Sbjct: 591 AMVYLLKMLYEGICPNEATWNVLV 614



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 151/345 (43%), Gaps = 5/345 (1%)

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           A +   + +G+VD      Q+M+  G   T       I  +   G  + +LK     S  
Sbjct: 56  ATVRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDL 115

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
               P  R YN L+ A   +N +     V   M  +G+ P+  TYN L RA  Q      
Sbjct: 116 GCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDA 175

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A +ML EM      P+E + G IVSG CK G +E+A  FL      E  P    +N+++ 
Sbjct: 176 ARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFL-----AETVPVQASYNAVVH 230

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
                     V   +  M + G++P+VVT++TI+DA+  A  +     I   MV  G  P
Sbjct: 231 ALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTP 290

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           ++  F+ L KG+   G+   A S+   M   G  P+ + +  +I G C    ++ A+  +
Sbjct: 291 NVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFF 350

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             M    + PN  TY TL+ G+  A     A  +   M+  G +P
Sbjct: 351 NSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKP 395



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 119/244 (48%), Gaps = 1/244 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A  I+N +   G +P ++ YT ++  L ++  F    SLI K+  D   P+++ F
Sbjct: 376 GDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTF 435

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I    + G V  A+ +F  M+ +GC P   TYN L+ G    G  +++  ++  M  
Sbjct: 436 NTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEM-L 494

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +   + +  TYN ++   C     + A  ++ +M+  GIQPDA T+N +  AY + G+  
Sbjct: 495 NNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVS 554

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +L +M       N     I++S  C +G + +AM +L +M    + PN   +N L+
Sbjct: 555 IAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLV 614

Query: 248 KGFL 251
           +   
Sbjct: 615 RAIF 618



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/304 (21%), Positives = 124/304 (40%), Gaps = 32/304 (10%)

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
           R  A  G+    +  L EM+   V   E      +  + + G+ + A++  YR  +L   
Sbjct: 59  RRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCR 118

Query: 238 -PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P + V+N L+   L       V      M + GV P+V T++ ++ A      +   ++
Sbjct: 119 DPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARK 178

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE-------------------------- 330
           + D+M + G  PD      +  G  + G  ++A                           
Sbjct: 179 MLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRM 238

Query: 331 ----SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
               S++  M + G+ PNVV +TT++  +C A +++ A +I  +M  +G  PN+ T+  L
Sbjct: 239 WEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTAL 298

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
           + G+ E  +   A  +   M ++G  P   +  ++      IG  + A     S + +  
Sbjct: 299 VKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRN-A 357

Query: 447 SMPN 450
            +PN
Sbjct: 358 LLPN 361



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 5/182 (2%)

Query: 2   NILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N L+G+    G+   A  +F+ +   G  P   TY  L+  L R+   K   +++ ++  
Sbjct: 436 NTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLN 495

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
           +G +   + +N +IN   +      AM +  +M   G +P   T+N +I  Y   GK   
Sbjct: 496 NGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSI 555

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +  LL  M+   N   N   Y IL+   C++  +  A   + KM+  GI P+  T+N L 
Sbjct: 556 AACLLGQMNA-VNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLV 614

Query: 178 RA 179
           RA
Sbjct: 615 RA 616


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 198/393 (50%), Gaps = 4/393 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ ++    P      ++ ++E G  P +  Y  L+    ++   +    + +++ K G+
Sbjct: 195 LDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGL 254

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P ++ FN +IN   +S N+DE  ++ + M+++   P   TY+ LI G    G+ + + +
Sbjct: 255 RPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQ 314

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M Q + ++PN  T+  L+   C    I+ A N  ++M+  G++PD V YNTL    
Sbjct: 315 LFDEMQQ-RGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGL 373

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+  +A +++ EM+   ++P++ T   ++ GYCKEG++E AM     M E  V  + 
Sbjct: 374 CKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDN 433

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V F +LI GF         ++ L  M E G+KPD  T++ ++D +   G +    ++  +
Sbjct: 434 VAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKE 493

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G +P +  +++L  G  + G+ + A  +L +M   GV P+ + +  ++ G C   K
Sbjct: 494 MQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGK 553

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
            +  + +     E G+  +   Y +L+  Y ++
Sbjct: 554 AEDLLKLRN---EKGLIVDYAYYTSLVSEYNKS 583



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 201/450 (44%), Gaps = 53/450 (11%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILS----LISKVEKD-------------GMKPDSILFN 68
           R T  +Y  +   L+  + F+   S    L+S+  KD             G +  + +F+
Sbjct: 98  RHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFD 157

Query: 69  AMINACSESGNVDEAMKIFQKMKDS-------GC-------------------------- 95
           A++ A  +SG V +A++ F+ +++S       GC                          
Sbjct: 158 ALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEY 217

Query: 96  --KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
              P    YN LI  +   G   ++ KL+    + + ++P   ++N L+   C   +++E
Sbjct: 218 GFPPKVQYYNILINKFCKEGSIRDA-KLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDE 276

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
            + +   M  + I PD  TY+ L     + G    AEQ+  EMQ   +RPN  T   ++ 
Sbjct: 277 GFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALID 336

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
           G C+   ++ AM   ++M  + V P+LV++N+L+ G   + D +   K +  M   G+KP
Sbjct: 337 GQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKP 396

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           D +T++T++D +   G +    EI   M + G+  D   F+ L  G+ R G  + AE  L
Sbjct: 397 DKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTL 456

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M + G+ P+   +T VI G+C    ++    + ++M   G  P + TY  L+ G  + 
Sbjct: 457 REMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQ 516

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
            Q   A  LL+ M   GV P   T  ++ +
Sbjct: 517 GQMKNANMLLEAMLNLGVTPDDITYNILLE 546



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 81/363 (22%), Positives = 175/363 (48%), Gaps = 2/363 (0%)

Query: 81  DEAMKIFQKMKDS-GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           D A  +F  + D+ G + +   ++ L+  Y + G   ++++  +L+ ++ N +       
Sbjct: 134 DSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLV-RNSNFQIPFHGCG 192

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+    + NS    W    +++  G  P    YN L   + + G    A+ +  E++  
Sbjct: 193 YLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKR 252

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            +RP   +   +++G CK  N+++  R    M+E  ++P++  ++ LI G       D  
Sbjct: 253 GLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVA 312

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
           ++    M++ G++P+ +TF+ ++D    +  +      +  M+  G++PD+ +++ L  G
Sbjct: 313 EQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNG 372

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             + G+  KA  ++  MR  G+ P+ + +TT+I G+C    ++ AM I + M E G+  +
Sbjct: 373 LCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLD 432

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
              +  L+ G+    +   AE  L+ M E G++P  +T  +V D +   G  +   ++LK
Sbjct: 433 NVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLK 492

Query: 440 SAE 442
             +
Sbjct: 493 EMQ 495



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 136/307 (44%), Gaps = 5/307 (1%)

Query: 141 LVRAWCSKNSIEEAWNVVYKMV-ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           ++R   S+   + A +V   ++  +G +     ++ L  AY   G    A Q    ++N+
Sbjct: 123 IIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNS 182

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
             +     CG ++       +      F   + E    P +  +N LI  F   K+    
Sbjct: 183 NFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKF--CKEGSIR 240

Query: 260 DKALTLME--EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
           D  L   E  + G++P  V+F+T+++    +  + +   +   M +  I PD+  +S+L 
Sbjct: 241 DAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLI 300

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            G  + G    AE +   M++ G+ PN + FT +I G C + ++  AM+ Y +M  +G+ 
Sbjct: 301 HGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVK 360

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           P+L  Y TLL G  +     +A +L+  M   G++P K T   + D +   G    A  +
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420

Query: 438 LKSAEED 444
            K   E+
Sbjct: 421 RKGMNEE 427


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 193/398 (48%), Gaps = 13/398 (3%)

Query: 44  RFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYN 103
           R +  +    +++  G++PD   ++ +++A S+SG + EA  +F  M    C P   TYN
Sbjct: 156 RLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYN 212

Query: 104 TLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVA 163
            L+ GY  +G+  E+  L++ + +    +PN  TY+I++  +C  + +EEAW V  KM+ 
Sbjct: 213 VLMDGYCKIGQTYEAQSLMKEILK-AGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIE 271

Query: 164 SGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE-GNME 222
           S   P+AVT+NTL   + + G    A ++  EM+    +    T   ++   CK+ G + 
Sbjct: 272 SNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVY 331

Query: 223 DAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK--PDVVTFST 280
            A+    +++   + P +V +NSLI+GF D +    + +A+   +E   K  P+V+T+S 
Sbjct: 332 TAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARR---LSEAMQYFDEMEGKCAPNVITYSI 388

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++D       M +  +  +DM   G  P +  +  L  G+ + GE + A      M+  G
Sbjct: 389 LIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAG 448

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
             PN V+F T+I G C A +    + +   M   G  P++ TY  L+ G   A    R E
Sbjct: 449 CAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSAN---RVE 505

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           +  ++ +     P  +T   +     A     EA+ +L
Sbjct: 506 DAQRLFDGMACAPNVTTFNFLIRGLCAQKKVEEARNIL 543



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 222/507 (43%), Gaps = 74/507 (14%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV   K  +A  +F  ++     P   TY  L+    +  +    +S+ S ++  G+ P+
Sbjct: 7   LVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPN 66

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +   N ++    E G +  A+K+F++M+     PT++++N L++G+   G+  ++L  LQ
Sbjct: 67  ASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQ 126

Query: 124 LMSQDKNVKPNDRTYNILVRAWC----SKNSIEEAWNVVYKMVASGIQPDA--------- 170
            M +  +      TYN++++  C    S N +E+A     +M ASG++PD          
Sbjct: 127 DMRKSSSSVATG-TYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSA 185

Query: 171 -----------------------VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
                                  +TYN L   Y + G+TY A+ ++ E+      PN  T
Sbjct: 186 LSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFT 245

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
             II++ YCK   +E+A     +M E    PN V FN+LI GF      +   K    ME
Sbjct: 246 YSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEME 305

Query: 268 EFGVKPDVVTFSTIMDAWS-----------------SAGL-------------------M 291
           + G K  +VT++T++D+                    AGL                   +
Sbjct: 306 KIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRL 365

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            +  + FD+M +    P++  +SIL  G  +    ++A   L  M+ +G  P VV +  +
Sbjct: 366 SEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGL 424

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I+G+C   +++ A+  +EKM   G  PN   + TL+ G  +A++      LL  M  +G 
Sbjct: 425 INGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGC 484

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVL 438
           +P   T   +     +     +A+R+ 
Sbjct: 485 KPDVITYNCLISGLCSANRVEDAQRLF 511



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 174/373 (46%), Gaps = 15/373 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  EAH +F+ +      P ++TY  L+    +  +     SL+ ++ K G 
Sbjct: 183 LSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGY 239

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+   ++ +IN   +   V+EA ++F KM +S C P   T+NTLI G+   G  E+++K
Sbjct: 240 EPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIK 299

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSK-NSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           L   M +    K    TYN L+ + C K   +  A ++  K+  +G+ P  VTYN+L + 
Sbjct: 300 LFAEM-EKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQG 358

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           +        A Q   EM+  +  PN  T  I++ G CK   M++A + L  MK     P 
Sbjct: 359 FCDARRLSEAMQYFDEMEG-KCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPT 417

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           +V +  LI GF    +   +  AL   E+    G  P+ V F+T++D    A        
Sbjct: 418 VVTYGGLINGFCKCGE---LKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLR 474

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +   M   G +PD+  ++ L  G   A   + A+ +   M      PNV  F  +I G C
Sbjct: 475 LLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLC 531

Query: 357 NAVKMQRAMSIYE 369
              K++ A +I +
Sbjct: 532 AQKKVEEARNILD 544



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 166/326 (50%), Gaps = 8/326 (2%)

Query: 103 NTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV 162
           N L+ G  +  K +++L+L + +       PN  TYN+L+R +C    + +A +V   M 
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGL-FAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMK 59

Query: 163 ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNME 222
           +SG+ P+A T NTL     + G+   A ++  EMQ     P   +  I++ G+   G + 
Sbjct: 60  SSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVR 119

Query: 223 DAMRFLYRMKELEVHPNLVVFNSLIKGFL-DIKDSDGVDKALTLMEEF---GVKPDVVTF 278
           DA+  L  M++         +N ++KG   + K ++ +++A+   +E    GV+PD+ ++
Sbjct: 120 DALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESY 179

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
             ++ A S +G M +   +F  M      PDI  +++L  GY + G+  +A+S++  + K
Sbjct: 180 HILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILK 236

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            G  PNV  ++ +I+ +C   K++ A  ++ KM E    PN  T+ TL+ G+ +A     
Sbjct: 237 AGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLED 296

Query: 399 AEELLQVMEEKGVRPKKSTIQLVADS 424
           A +L   ME+ G +    T   + DS
Sbjct: 297 AIKLFAEMEKIGCKATIVTYNTLIDS 322



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 175/368 (47%), Gaps = 13/368 (3%)

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           NA+++    +   D+A+++F+++      P   TYN LI+G+   G+  +++ +   M +
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDM-K 59

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              + PN  T N L+   C    +  A  +  +M A    P + ++N L R +   G   
Sbjct: 60  SSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVR 119

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN----MEDAMRFLYRMKELEVHPNLVVF 243
            A   L +M+ +       T  +++ G C E      +E AM F   MK   V P+L  +
Sbjct: 120 DALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESY 179

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           + L+     + DS  + +A  L       PD++T++ +MD +   G   + Q +  +++K
Sbjct: 180 HILLSA---LSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILK 236

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           AG EP++  +SI+   Y +  + ++A  +   M +    PN V F T+I+G+C A  ++ 
Sbjct: 237 AGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLED 296

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP-WRAEELLQVMEEKGVRPK----KSTI 418
           A+ ++ +M +IG    + TY TL+    + +   + A +L   +E  G+ P      S I
Sbjct: 297 AIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLI 356

Query: 419 QLVADSWR 426
           Q   D+ R
Sbjct: 357 QGFCDARR 364



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 58/133 (43%)

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  G V A +  +A  +   +      PN   +  +I G+C   +M +A+S++  M   G
Sbjct: 3   LLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSG 62

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           + PN  T  TLL G  E  Q   A +L + M+     P  ++  ++   +   G  R+A 
Sbjct: 63  LLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDAL 122

Query: 436 RVLKSAEEDRQSM 448
             L+   +   S+
Sbjct: 123 AHLQDMRKSSSSV 135


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 208/426 (48%), Gaps = 7/426 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G    A   F+ ++  G +P++ T   ++A++ +  R   +     ++    + P+   
Sbjct: 118 QGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQMLTSRVCPNVSS 177

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           FN +I+     G + +A+ I   M+ +G  PT  +YNTL+      G+ + +L L+  M 
Sbjct: 178 FNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHM- 236

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + K ++ +  TYN+ + + C  +   + + V+ KM    I P+ V+YNTL   + + G+ 
Sbjct: 237 ECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKI 296

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++  EM    + PN  T  I+++GYC  GN E+A+R L  M+  +V PN V   +L
Sbjct: 297 GVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTL 356

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKP---DVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           + G   +  S   D A  ++E + +     + ++ + ++D     GL+ +  ++  +M K
Sbjct: 357 LNG---LYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCK 413

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ PDI  FS+L  G+ + G   KA+ +++ + + G  PN V+F+T+I   C    +  
Sbjct: 414 DGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYE 473

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
            M  Y  M   G N +  T  +L+    E  +   AEE L  +   G+ P   T   + +
Sbjct: 474 GMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIIN 533

Query: 424 SWRAIG 429
            +  +G
Sbjct: 534 GYANVG 539



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 201/404 (49%), Gaps = 1/404 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L  +GK  +A  I   +   G+ PT+++Y TL++   ++ RFK  L LI  +E  G+
Sbjct: 182 ISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGI 241

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + D   +N  I++   +    +   + +KM++    P   +YNTLI G+   GK   + +
Sbjct: 242 QADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATR 301

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M +  N+ PN  TYNIL+  +C   + EEA  ++  M A+ ++P+ VT  TL    
Sbjct: 302 VFNEMIE-LNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGL 360

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +   A  +L     N+   N  +  +++ G C+ G +++A + L  M +  V+P++
Sbjct: 361 YKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDI 420

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + F+ LI GF  + + +   + ++ +   G  P+ V FST++      G + +  + +  
Sbjct: 421 ITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAA 480

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G   D    + L       G+  +AE  L  + + G+ PN V F  +I+G+ N   
Sbjct: 481 MNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGD 540

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
              A S+++KM   G +P+  TY +LL    + +  W A +LL+
Sbjct: 541 GSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLK 584



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/488 (21%), Positives = 202/488 (41%), Gaps = 72/488 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N  V +GK   A  +FN +IE    P LITY  L+        F+  L L+  +E + +
Sbjct: 287 INGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDV 346

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ +    ++N   +S   D A  I ++   +       ++  +I G    G  +E+ +
Sbjct: 347 RPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQ 406

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M +D  V P+  T+++L+  +C   ++ +A  V+ K+   G  P+ V ++TL    
Sbjct: 407 LLIEMCKD-GVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNS 465

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G  Y   +    M  N    +  TC  +V+  C+ G + +A  FL+ +  + + PN 
Sbjct: 466 CKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNS 525

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP--------------------------- 273
           V F+ +I G+ ++ D  G       M   G  P                           
Sbjct: 526 VTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKK 585

Query: 274 --------DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
                   D ++++T++   S +G + +   +F++M++  I PD + ++ +  G +R G 
Sbjct: 586 LHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGR 645

Query: 326 PQKAESILTS-MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN------- 377
              A   L   M+K  +  N +++T  I G   A + + A+ ++++M E G++       
Sbjct: 646 LVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALN 705

Query: 378 ----------------------------PNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
                                       PNL T+  LL GY   +      +L  +M   
Sbjct: 706 SITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRS 765

Query: 410 GVRPKKST 417
           G  P + T
Sbjct: 766 GFFPNRLT 773



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 180/408 (44%), Gaps = 1/408 (0%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
            +  L+    RQ      ++  S +   G KP     N ++ +  ++         F++M
Sbjct: 107 VFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQM 166

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
             S   P  S++N LI      GK ++++ +L +M ++  V P   +YN L+   C K  
Sbjct: 167 LTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYV-PTIVSYNTLLSWCCKKGR 225

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
            + A  +++ M   GIQ D  TYN    +  +   + +   +L +M+N  + PNE +   
Sbjct: 226 FKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNT 285

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           +++G+ KEG +  A R    M EL + PNL+ +N LI G+    + +   + L +ME   
Sbjct: 286 LINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEAND 345

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           V+P+ VT  T+++    +      + I +         +    +++  G  R G   +A 
Sbjct: 346 VRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAF 405

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +L  M K GV+P+++ F+ +I+G+C    + +A  +  K+   G  PN   + TL++  
Sbjct: 406 QLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNS 465

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            +    +   +    M   G      T   +  S    G   EA+  L
Sbjct: 466 CKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFL 513



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/399 (23%), Positives = 173/399 (43%), Gaps = 43/399 (10%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           I++T ++  L R         L+ ++ KDG+ PD I F+ +IN   + GN+++A ++  K
Sbjct: 386 ISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSK 445

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           +   G  P    ++TLI     VG   E +K    M+ +     ++ T N LV + C   
Sbjct: 446 IYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQ-NADNFTCNSLVASLCENG 504

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            + EA   ++ +   G+ P++VT++ +   YA  G+   A  +  +M +    P+  T G
Sbjct: 505 KLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYG 564

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            ++   CK  N  +A + L ++  + +  + + +N+LI   ++I  S  + +A+ L EE 
Sbjct: 565 SLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLI---VEISKSGNLLEAVRLFEEM 621

Query: 270 ---GVKPDVVTFSTIM------------------------------------DAWSSAGL 290
               + PD  T++ I+                                    D    AG 
Sbjct: 622 IQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQ 681

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
                 +F +M + G+  D+   + +  GY R G+   A S+++  R   V PN+  F  
Sbjct: 682 SKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNI 741

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           ++ G+     +     +Y  M   G  PN  TY +L+ G
Sbjct: 742 LLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILG 780



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 119/533 (22%), Positives = 214/533 (40%), Gaps = 45/533 (8%)

Query: 5    VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
            VG G    A  +F+ +I  GH P+  TY +L+  L + + F     L+ K+    +  D+
Sbjct: 538  VGDGSG--AFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDT 595

Query: 65   ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
            I +N +I   S+SGN+ EA+++F++M  +   P + TY  ++ G    G+   +   L  
Sbjct: 596  ISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGR 655

Query: 125  MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
            + Q + +  N   Y   +         + A  +  +M   G+  D +  N++   Y++ G
Sbjct: 656  LMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMG 715

Query: 185  ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
            + + A  ++ + +N  V PN  T  I++ GY +  ++    +    M+     PN + ++
Sbjct: 716  KVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYH 775

Query: 245  SLIKGF-------LDIK-------------------------DSDGVDKALTL---MEEF 269
            SLI G        L IK                         + + +DK + L   ME F
Sbjct: 776  SLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVF 835

Query: 270  GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
             V  D  T   + D      +         +M+K G  P    +  + K   R G+ Q A
Sbjct: 836  RVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGA 895

Query: 330  ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
              +   M   G+  +      ++ G     K++ AM I ++M  +   P   T+ TL+  
Sbjct: 896  FKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHV 955

Query: 390  YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS-- 447
            + +      A  L  +ME   V+       ++  +  A G   +    L   EE +Q   
Sbjct: 956  FCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANG---DVITALDFYEEIKQKGL 1012

Query: 448  MPNKKD-EIAVESIHRKQNLSASNSTF--LQIPGVVSSEHNGSSAAKIRSQIV 497
            +PN     + V +I  K  +S        L   G+VS   +G S    R  +V
Sbjct: 1013 LPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYLDGKSQKSCRDFVV 1065



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 95/246 (38%), Gaps = 45/246 (18%)

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE-- 296
           N  VF+ LI+ +L            + M   G KP V T + IM     A ++  C+   
Sbjct: 104 NPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIM-----ASMVKNCRAHL 158

Query: 297 ---IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
               F  M+ + + P++  F+IL       G+ +KA +ILT M + G  P +V + T++S
Sbjct: 159 VWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLS 218

Query: 354 GWCNAVKMQRAMSIYEKM---------CEIG--------------------------INP 378
             C   + + A+ +   M         C                             I P
Sbjct: 219 WCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITP 278

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           N  +Y TL+ G+ +  +   A  +   M E  + P   T  ++ + +   G   EA R+L
Sbjct: 279 NEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLL 338

Query: 439 KSAEED 444
              E +
Sbjct: 339 DVMEAN 344


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/437 (24%), Positives = 211/437 (48%), Gaps = 3/437 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A   F  +++ G  P   +Y  L+  L         L L + +E  G++PD + +N +  
Sbjct: 300 AKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAK 359

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-QLMSQDKNV 131
                G ++ A  I QKM   G  P   TY  LI G+  +G  EE+LKL  +++S    +
Sbjct: 360 GFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQL 419

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
                T  +L+ + C    ++ A+ +  +M A+G++PD +TY+TL     + GE  +A  
Sbjct: 420 SIISST--VLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAIL 477

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  +M +N++ PN    G I+ G C++G +  A  +   +    +  +++++N +I G++
Sbjct: 478 LYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYI 537

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
              ++    K    + E G+ P +VTF+++M  +     + + + + D +   G+EP+  
Sbjct: 538 KRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAV 597

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++ L   Y   G  Q    +L+ M+   + P  + +T VI G C   K+Q +  + E M
Sbjct: 598 TYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDM 657

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
             +G+ P+  +Y T++  + +A+   +A +L   M    + P   T  ++ + +   G  
Sbjct: 658 DAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDL 717

Query: 432 REAKRVLKSAEEDRQSM 448
           ++A  +L S +  + ++
Sbjct: 718 KDADNLLVSLQNRKVNL 734



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 96/422 (22%), Positives = 208/422 (49%), Gaps = 1/422 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA  ++  +I  G + ++I+ T L+ +L + ++      L  ++E +G++PD I +
Sbjct: 400 GNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITY 459

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +I+   + G V +A+ +++KM  +   P +  +  ++ G    GK  ++      +  
Sbjct: 460 STLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLIT 519

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
             N+  +   YNI++  +  + +  EA  +  ++   GI P  VT+N+L   +    +  
Sbjct: 520 -SNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLS 578

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A ++L  ++ + + PN  T   +++ YC+EGNM+  +  L  MK   + P  + +  +I
Sbjct: 579 QARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVI 638

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           KG           + L  M+  G+ PD V+++TI+ A+  A  M K  +++D M+   +E
Sbjct: 639 KGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLE 698

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P    ++IL  G+   G+ + A+++L S++   V+ N   +TT+I   C    + +A+  
Sbjct: 699 PTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVY 758

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           + +M E G   +++ Y  ++    +      A+    +M   GV P +   +++ +++  
Sbjct: 759 FRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQ 818

Query: 428 IG 429
            G
Sbjct: 819 CG 820



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 188/394 (47%), Gaps = 7/394 (1%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           T + +V  L RQ RF+  +      E    +P  + FN +++   + G VD A   F  M
Sbjct: 248 TSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMM 307

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
              G  P   +YN LI G    G   E+L L   M ++  ++P+  TYNIL + +     
Sbjct: 308 LKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDM-ENHGLEPDMVTYNILAKGFRLLGL 366

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           I  AWN++ KM+  G  P+ VTY  L   + Q G    A ++  EM ++  + +  +  +
Sbjct: 367 INGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTV 426

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++   CK   ++ A +    M+   + P+L+ +++LI G   +     V +A+ L E+  
Sbjct: 427 LLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHG---LCKQGEVQQAILLYEKMC 483

Query: 271 ---VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
              + P+ +    I+      G + + +  FD ++ + +  DI +++I+  GY++ G  +
Sbjct: 484 SNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTR 543

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           +A  +   + + G+ P +V F +++ G+C   K+ +A  + + +   G+ PN  TY TL+
Sbjct: 544 EAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLM 603

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             Y E        ELL  M+ K + P   T  +V
Sbjct: 604 NVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVV 637



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/421 (23%), Positives = 200/421 (47%), Gaps = 11/421 (2%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NIL+      G   EA  + N +   G  P ++TY  L              ++I K+  
Sbjct: 320 NILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLI 379

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G  P+ + +  +I    + GNV+EA+K++++M   G + +  +   L+       + + 
Sbjct: 380 KGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDV 439

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           + KL   M  +  ++P+  TY+ L+   C +  +++A  +  KM ++ I P+++ +  + 
Sbjct: 440 AFKLFCEMEAN-GLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAIL 498

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               + G+  +A      +  + +  +     I++ GY K GN  +A++   ++ E  + 
Sbjct: 499 MGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGIS 558

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P +V FNSL+ GF   +      + L  ++  G++P+ VT++T+M+ +   G M    E+
Sbjct: 559 PTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLEL 618

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
             +M    I P    ++++ KG  +  + Q++  +L  M   G+ P+ V + T+I  +C 
Sbjct: 619 LSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCK 678

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWG---YGEAKQPWRAEELLQVMEEKGVRPK 414
           A  M++A  +Y+KM    + P   TY  L+ G   YG+ K    A+ LL  ++ + V   
Sbjct: 679 ARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKD---ADNLLVSLQNRKVNLN 735

Query: 415 K 415
           K
Sbjct: 736 K 736



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 152/301 (50%), Gaps = 1/301 (0%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           + +G   EA  ++  L E+G  PT++T+ +L+      ++      L+  ++  G++P++
Sbjct: 537 IKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNA 596

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           + +  ++N   E GN+   +++  +MK     PT  TY  +IKG     K +ES +LL+ 
Sbjct: 597 VTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLED 656

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M     + P+  +YN +++A+C    + +A+ +  KM+   ++P +VTYN L   +  YG
Sbjct: 657 MDA-VGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYG 715

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +   A+ +L  +QN +V  N+     I+  +C +G+++ A+ +  +M E     ++  ++
Sbjct: 716 DLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYS 775

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           ++I                 +M   GV PD   F  +++A+   G +    E+  +M+K+
Sbjct: 776 AVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKS 835

Query: 305 G 305
           G
Sbjct: 836 G 836



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 163/341 (47%), Gaps = 4/341 (1%)

Query: 3   ILVG---KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG 59
           IL+G   KGK  +A   F+ LI       +I Y  ++    ++   +  + L  ++ + G
Sbjct: 497 ILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKG 556

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + P  + FN+++     +  + +A ++   +K  G +P   TY TL+  Y   G  +  L
Sbjct: 557 ISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLL 616

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +LL  M + K + P   TY ++++  C +  ++E+  ++  M A G+ PD V+YNT+ +A
Sbjct: 617 ELLSEM-KAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQA 675

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + +  +  +A Q+  +M  + + P   T  I+++G+C  G+++DA   L  ++  +V+ N
Sbjct: 676 FCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLN 735

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
              + ++IK      D D        M E G +  +  +S ++       L+ + +  F 
Sbjct: 736 KYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFC 795

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
            M+  G+ PD  +F +L   + + G       +L  M K G
Sbjct: 796 MMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/380 (21%), Positives = 172/380 (45%), Gaps = 4/380 (1%)

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +++++ +  A S S  V +A+ +  KMKD     +  TYN+L+    +     +    ++
Sbjct: 179 NVVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYNEIK 238

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           +         ++ T +I+V   C ++  ++A            QP  V++NT+   Y + 
Sbjct: 239 V----SGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKL 294

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A+     M  + + P+  +  I++ G C  G+M +A+     M+   + P++V +
Sbjct: 295 GFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTY 354

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N L KGF  +   +G    +  M   G  P++VT++ ++      G + +  +++ +M+ 
Sbjct: 355 NILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMIS 414

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G +  I   ++L     ++ +   A  +   M   G+ P+++ ++T+I G C   ++Q+
Sbjct: 415 HGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQ 474

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+ +YEKMC   I PN   +  +L G  E  +  +A      +    +        ++ D
Sbjct: 475 AILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMID 534

Query: 424 SWRAIGLAREAKRVLKSAEE 443
            +   G  REA ++ K   E
Sbjct: 535 GYIKRGNTREAVKLYKQLGE 554


>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
 gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
          Length = 495

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 182/373 (48%), Gaps = 8/373 (2%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +NA +NA  + G+  +A KIF  M    C P   TY  +++G  +  K + +L+LLQ M 
Sbjct: 40  YNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDM- 98

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + K + P     N+LV   C    ++ A+ + YK ++     D ++YN L     +  + 
Sbjct: 99  ESKMLTPTTFIVNMLVSCLCKNGKVDAAYEL-YKRLSDECSLDRISYNMLTYGLCKADQI 157

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM----KELEVHPNLVV 242
            RA  +  EM+ N V P+  T   ++ GYC+ G ME AM  L  M    K  +V P++  
Sbjct: 158 DRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYS 217

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +N++I GF   +        L  M + G  P+VVTF+T++D     G + +   +F+ MV
Sbjct: 218 YNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMV 277

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           +   EP    +++L  G+ RA    KA      M + GV PNV  +T +I G C+A K++
Sbjct: 278 ERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVE 337

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A+ I ++M   G  PN+ TY  ++    +  Q  RA +L    +  G R  K      A
Sbjct: 338 DALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFN--DAMGSRTAKCKPDSYA 395

Query: 423 DSWRAIGLAREAK 435
            S     L R++K
Sbjct: 396 YSTIVYWLCRQSK 408



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 161/356 (45%), Gaps = 40/356 (11%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N LV  G   +A  IF+ ++ +   P + TY  ++  L    +  + L L+  +E   +
Sbjct: 44  LNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKML 103

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSG--------------CK---------- 96
            P + + N +++   ++G VD A ++++++ D                CK          
Sbjct: 104 TPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAV 163

Query: 97  ----------PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK---NVKPNDRTYNILVR 143
                     P+  TYN L+ GY   G+ E+++ LL+ M + K   +V P+  +YN ++ 
Sbjct: 164 FGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVIS 223

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +C    +  A  V+ +M+ SG  P+ VT+NTL       G+   A  M   M      P
Sbjct: 224 GFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEP 283

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
              T  ++++G+ +   ++ A  +   M    V PN+  + +LI G  D    +   + L
Sbjct: 284 TAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEIL 343

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV---KAGIEPDIHVFSIL 316
             M   G +P+VVT++ ++ A    G + +  ++F+D +    A  +PD + +S +
Sbjct: 344 KRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTI 399



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 154/325 (47%), Gaps = 11/325 (3%)

Query: 100 STYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVY 159
           +T + +I    N+  P+ + ++ +  ++ ++ +    TYN  + A        +A  +  
Sbjct: 2   ATEDDVIHVLENIKSPKLASRVFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFD 61

Query: 160 KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEG 219
            M+     P+  TY  + R      +T  A ++L +M++  + P      ++VS  CK G
Sbjct: 62  DMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNG 121

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVV 276
            + DA   LY+    E   + + +N L  G      +D +D+AL +   MEE  V P ++
Sbjct: 122 KV-DAAYELYKRLSDECSLDRISYNMLTYGLC---KADQIDRALAVFGEMEENAVVPSLL 177

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVK----AGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           T++ ++  +  AG M +   + ++M++    + + PD++ ++ +  G+ +A +   A  +
Sbjct: 178 TYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYV 237

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           L  M K G  PNVV F T++ G C   K+  A +++E M E    P   TY  L+ G+  
Sbjct: 238 LRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHAR 297

Query: 393 AKQPWRAEELLQVMEEKGVRPKKST 417
           A +  +A +    M  +GV P   T
Sbjct: 298 ALRIDKANDYFVDMLRRGVEPNVYT 322



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 125/249 (50%), Gaps = 4/249 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P + +Y T+++   + ++  +   ++ ++ K G  P+ + FN +++    +G +DEA  +
Sbjct: 213 PDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAM 272

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F+ M +  C+PT  TY  LI G+    + +++      M + + V+PN  TY  L+   C
Sbjct: 273 FEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLR-RGVEPNVYTYTALIGGLC 331

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV---RP 203
             N +E+A  ++ +M ++G +P+ VTY  +  A  + G+  RA ++  +   ++    +P
Sbjct: 332 DANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKP 391

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +      IV   C++    +A  +  RM E ++     ++ ++  G   +++++ V++  
Sbjct: 392 DSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGLELVQETEKVERVC 451

Query: 264 TLMEEFGVK 272
                 G++
Sbjct: 452 LEASAHGIE 460



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 88/190 (46%), Gaps = 2/190 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA+ +F  ++E    PT +TYT L+    R  R          + + G++P+   +
Sbjct: 264 GKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTY 323

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ--LM 125
            A+I    ++  V++A++I ++M  +G +P   TY  +I      G+ E + KL    + 
Sbjct: 324 TALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMG 383

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           S+    KP+   Y+ +V   C ++   EA+    +MV S +      Y  +A       E
Sbjct: 384 SRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGLELVQE 443

Query: 186 TYRAEQMLFE 195
           T + E++  E
Sbjct: 444 TEKVERVCLE 453


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 93/410 (22%), Positives = 208/410 (50%), Gaps = 1/410 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+ +EA  ++  +++ G  P+++TY++L+    +    +S  +L   + K G  PD
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++  +++  S+ G +  AM+   KM     +     +N+LI G+  + + +E+LK+ +
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           LM     +KP+  T+  ++R    +  +EEA  + ++M   G++PDA+ Y TL  A+ ++
Sbjct: 521 LMGI-YGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH 579

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +     Q+   MQ N++  +   C +++    K   +EDA +F   + E ++ P++V +
Sbjct: 580 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 639

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N++I G+  ++  D  ++   L++     P+ VT + ++        M     +F  M +
Sbjct: 640 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 699

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G +P+   +  L   + ++ + + +  +   M++ G+ P++V ++ +I G C   ++  
Sbjct: 700 KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDE 759

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           A +I+ +  +  + P++  Y  L+ GY +  +   A  L + M   GV+P
Sbjct: 760 ATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 100/410 (24%), Positives = 195/410 (47%), Gaps = 3/410 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  + + +++ G  P ++T+ TL+    ++        L   +E+ G++PD I ++ +I+
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK-PEESLKLLQLMSQDKNV 131
              ++G +    K+F +    G K     +++ I  Y   G     S+   +++ Q   +
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ--GI 387

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PN  TY IL++  C    I EA+ +  +++  G++P  VTY++L   + + G       
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  +M      P+    G++V G  K+G M  AMRF  +M    +  N+VVFNSLI G+ 
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
            +   D   K   LM  +G+KPDV TF+T+M      G + +   +F  M K G+EPD  
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDAL 567

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            +  L   + +  +P     +   M++  +  ++ +   VI       +++ A   +  +
Sbjct: 568 AYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL 627

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            E  + P++ TY T++ GY   ++   AE + ++++     P   T+ ++
Sbjct: 628 IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 677



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 152/325 (46%), Gaps = 1/325 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++ +  R  ++ + +L+    R  RF   L +   +   G+KPD   F  ++      G 
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           ++EA+ +F +M   G +P    Y TLI  +    KP   L+L  LM ++K +  +    N
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNK-ISADIAVCN 605

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           +++      + IE+A      ++   ++PD VTYNT+   Y        AE++   ++  
Sbjct: 606 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVT 665

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              PN  T  I++   CK  +M+ A+R    M E    PN V +  L+  F    D +G 
Sbjct: 666 PFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGS 725

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            K    M+E G+ P +V++S I+D     G + +   IF   + A + PD+  ++IL +G
Sbjct: 726 FKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 785

Query: 320 YVRAGEPQKAESILTSMRKYGVHPN 344
           Y + G   +A  +   M + GV P+
Sbjct: 786 YCKVGRLVEAALLYEHMLRNGVKPD 810



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 152/325 (46%), Gaps = 3/325 (0%)

Query: 113 GKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT 172
           G  +++L++    +Q   V P D  Y +L  +    + ++   +   K+   GI+P  V+
Sbjct: 160 GMVDKALEIFVYSTQLGVVIPQDSVYRML-NSLIGSDRVDLIADHFDKLCRGGIEPSGVS 218

Query: 173 -YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
            +  +  A    GE  +A      +     R    +C  ++ G   +  +E A R L  +
Sbjct: 219 AHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLV 277

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
            +    PN+V F +LI GF    + D       +ME+ G++PD++ +ST++D +  AG++
Sbjct: 278 LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML 337

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
           G   ++F   +  G++ D+ VFS     YV++G+   A  +   M   G+ PNVV +T +
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL 397

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I G C   ++  A  +Y ++ + G+ P++ TY +L+ G+ +         L + M + G 
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457

Query: 412 RPKKSTIQLVADSWRAIGLAREAKR 436
            P      ++ D     GL   A R
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMR 482



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 140/276 (50%), Gaps = 5/276 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M + + +G+  EA ++F  + + G  P  + Y TL+ A  +  +    L L   ++++ +
Sbjct: 538 MRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKI 597

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D  + N +I+   +   +++A K F  + +   +P   TYNT+I GY ++ + +E+ +
Sbjct: 598 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAER 657

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + +L+ +     PN  T  IL+   C  N ++ A  +   M   G +P+AVTY  L   +
Sbjct: 658 IFELL-KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 716

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++  +   + ++  EMQ   + P+  +  II+ G CK G +++A    ++  + ++ P++
Sbjct: 717 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 776

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL--MEEFGVKPD 274
           V +  LI+G+   K    V+ AL    M   GVKPD
Sbjct: 777 VAYAILIRGY--CKVGRLVEAALLYEHMLRNGVKPD 810



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 85/375 (22%), Positives = 168/375 (44%), Gaps = 11/375 (2%)

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCK-PTTSTY---NTLIKGYGNVGKPEESLKLLQLM 125
           ++  C   G VD+A++IF      G   P  S Y   N+LI G   V    +    L   
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLI-GSDRVDLIADHFDKLC-- 208

Query: 126 SQDKNVKPND-RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
                ++P+    +  ++ A   K  + +A +    ++  G +   V+ N + +  +   
Sbjct: 209 --RGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VD 265

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +   A ++L  + +    PN  T   +++G+CK G M+ A      M++  + P+L+ ++
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +LI G+          K  +     GVK DVV FS+ +D +  +G +     ++  M+  
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           GI P++  ++IL KG  + G   +A  +   + K G+ P++V ++++I G+C    ++  
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
            ++YE M ++G  P++  Y  L+ G  +      A      M  + +R        + D 
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505

Query: 425 WRAIGLAREAKRVLK 439
           W  +    EA +V +
Sbjct: 506 WCRLNRFDEALKVFR 520



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 101/205 (49%), Gaps = 1/205 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L    +  +A   FN LIE    P ++TY T++      +R      +   ++    
Sbjct: 608 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 667

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+++    +I+   ++ ++D A+++F  M + G KP   TY  L+  +      E S K
Sbjct: 668 GPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFK 727

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M Q+K + P+  +Y+I++   C +  ++EA N+ ++ + + + PD V Y  L R Y
Sbjct: 728 LFEEM-QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 786

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNE 205
            + G    A  +   M  N V+P++
Sbjct: 787 CKVGRLVEAALLYEHMLRNGVKPDD 811



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 89/172 (51%), Gaps = 5/172 (2%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  IF  L      P  +T T L+  L +       + + S + + G KP+++ +  ++
Sbjct: 654 EAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 713

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +  S+S +++ + K+F++M++ G  P+  +Y+ +I G    G+ +E+  +    + D  +
Sbjct: 714 DWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFH-QAIDAKL 772

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            P+   Y IL+R +C    + EA  +   M+ +G++PD    + L RA ++Y
Sbjct: 773 LPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD----DLLQRALSEY 820



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 10/149 (6%)

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVR-----AGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           FD + + GIEP      + A G+V       GE  KA      + + G    +V    V+
Sbjct: 204 FDKLCRGGIEPS----GVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVL 259

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
            G  +  +++ A  +   + + G  PN+ T+ TL+ G+ +  +  RA +L +VME++G+ 
Sbjct: 260 KGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE 318

Query: 413 PKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           P       + D +   G+     ++   A
Sbjct: 319 PDLIAYSTLIDGYFKAGMLGMGHKLFSQA 347


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 214/415 (51%), Gaps = 6/415 (1%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           H A+  F    + G + +L +   L++AL ++ +   +  +  ++ K  +  +   FN  
Sbjct: 147 HCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIF 206

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQ 127
           IN    +G +++A    + MK  G  P   TYNTL+ GY   G+ GK  ++   ++ M  
Sbjct: 207 INGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLA 266

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +K + PN+ T+N L+  +C   ++  A     +M   G++P+ VTYN+L       G+  
Sbjct: 267 NK-ICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLE 325

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +  +M    ++PN  T   +++G+CK+  M++A +    + + E+ PN++ FN++I
Sbjct: 326 EAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMI 385

Query: 248 KGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
             +  +    +G     ++++E G+ P+V T++ ++        +   +E+ ++M   G+
Sbjct: 386 DAYCKEGMMEEGFSLCSSMLDE-GILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGL 444

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           + D+  ++IL  G  +  + + AE +L  M   G+ PN V + T++ G+C   K++ A++
Sbjct: 445 KGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALN 504

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           +  +M +    PN+ TY  L+ GY +  +   A  LL  M EKG+ P ++T  +V
Sbjct: 505 VRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 189/387 (48%), Gaps = 4/387 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ LV + K  +  Y++  +I+      L T+   +  L R  +       I  ++  G+
Sbjct: 172 LSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGI 231

Query: 61  KPDSILFNAMINACSESGNVDEAMK---IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            P+ + +N +++   + G+  +  K     ++M  +   P   T+NTLI G+        
Sbjct: 232 SPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAA 291

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           + K  + M Q + +KPN  TYN L+   C+   +EEA ++  KMV  G++P+ VTYN L 
Sbjct: 292 AKKAFEEM-QKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALI 350

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
             + +      A ++  ++   ++ PN  T   ++  YCKEG ME+       M +  + 
Sbjct: 351 NGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGIL 410

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           PN+  +N LI G    +D     + L  ME  G+K DVVT++ ++D           +++
Sbjct: 411 PNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKL 470

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            ++M   G++P+   ++ L  GY   G+ + A ++ T M K    PNVV +  +I G+C 
Sbjct: 471 LNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCK 530

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYE 384
             K++ A  +  +M E G+NPN  TY+
Sbjct: 531 INKLEAANGLLNEMLEKGLNPNRTTYD 557



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 211/412 (51%), Gaps = 13/412 (3%)

Query: 47  SILSLISKVEKDGMKP--DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNT 104
           ++ S+   +  DG +P   +++ + ++ A  ++  +  A + F + KD G K + ++ N 
Sbjct: 111 TVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNP 170

Query: 105 LIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS 164
           L+       K  +   + + M + + +  N  T+NI +   C    + +A + +  M A 
Sbjct: 171 LLSALVKENKIGDVEYVYKEMIK-RRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAW 229

Query: 165 GIQPDAVTYNTLARAYAQYG---ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM 221
           GI P+ VTYNTL   Y + G   + Y+AE  + EM  N++ PNE T   ++ G+CK+ N+
Sbjct: 230 GISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENV 289

Query: 222 EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTF 278
             A +    M++  + PN+V +NSLI G  +   +  +++A+ L   M   G+KP++VT+
Sbjct: 290 AAAKKAFEEMQKQGLKPNIVTYNSLINGLCN---NGKLEEAIDLWDKMVGLGLKPNIVTY 346

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           + +++ +    +M +  ++FDD+ K  + P++  F+ +   Y + G  ++  S+ +SM  
Sbjct: 347 NALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLD 406

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            G+ PNV  +  +I+G C    +Q A  +  +M   G+  ++ TY  L+ G  +  +   
Sbjct: 407 EGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRN 466

Query: 399 AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           AE+LL  M   G++P   T   + D +   G  + A  V    E++R+  PN
Sbjct: 467 AEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQ-PN 517



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 178/355 (50%), Gaps = 6/355 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQ----KRFKSILSLISKVE 56
           +N L   GK ++A      +   G  P ++TY TLV    ++    K +K+  + + ++ 
Sbjct: 207 INGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAE-AFMKEML 265

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
            + + P+ + FN +I+   +  NV  A K F++M+  G KP   TYN+LI G  N GK E
Sbjct: 266 ANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLE 325

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           E++ L   M     +KPN  TYN L+  +C K  ++EA  V   +    + P+ +T+NT+
Sbjct: 326 EAIDLWDKMV-GLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTM 384

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
             AY + G       +   M +  + PN  T   +++G C++ +++ A   L  M+   +
Sbjct: 385 IDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGL 444

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
             ++V +N LI G      S   +K L  M   G+KP+ VT++T+MD +   G +     
Sbjct: 445 KGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALN 504

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
           +   M K   +P++  +++L KGY +  + + A  +L  M + G++PN   +  V
Sbjct: 505 VRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 34/268 (12%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  EA  +++ ++  G +P ++TY  L+    ++K  K    +   V K  +
Sbjct: 315 INGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQEL 374

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I FN MI+A  + G ++E   +   M D G  P  STYN LI G       + + +
Sbjct: 375 VPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKE 434

Query: 121 LLQ--------------------LMSQDKN--------------VKPNDRTYNILVRAWC 146
           LL                     L   DK+              +KPN  TYN L+  +C
Sbjct: 435 LLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYC 494

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            +  ++ A NV  +M     QP+ VTYN L + Y +  +   A  +L EM    + PN  
Sbjct: 495 MEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRT 554

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           T  I+     ++G   D    LY +  +
Sbjct: 555 TYDIVRLEMLEKGFSPDIEGHLYNISSM 582


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 206/453 (45%), Gaps = 44/453 (9%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P +++Y TL+  L + K+ K  + L+ ++E  G  P+S+    +++   + G +DEAM++
Sbjct: 177 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 236

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            + MK  G       Y TLI G+ N G  +   +L   M   K +  N  TY+ LV   C
Sbjct: 237 LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM-LGKGISANVVTYSCLVHGLC 295

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                +EA  V+  M   GI PD VTY  L     + G    A  +L  M      P+  
Sbjct: 296 RLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNV 355

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T  +++SG CKEG + DA + L  M E     ++V +N+L+KG   + D   VD+AL L 
Sbjct: 356 TYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKG---LCDKGKVDEALKLF 412

Query: 267 -----EEFGVKPDVVTFSTIMDAWSSAG--------------------------LMGKC- 294
                 E  ++P+V TF+ ++      G                          L+G C 
Sbjct: 413 NSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCL 472

Query: 295 --------QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
                    E++  ++  G  P+   +SIL  G+ +      A+ +   MR +G++P + 
Sbjct: 473 KAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALF 532

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            + T+++  C    +++A S++++M      P++ ++ T++ G  +A      +EL   M
Sbjct: 533 DYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKM 592

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            E G+RP   T   + +    +G   EAK  L+
Sbjct: 593 VEMGLRPDALTFSTLINRLSKLGELDEAKSALE 625



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 201/400 (50%), Gaps = 7/400 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA+ + N + E G  P ++TYT L+  L +  R    + L++ + + G +P ++ +
Sbjct: 298 GQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTY 357

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +++   + G V +A KI + M + G K    TYNTL+KG  + GK +E+LKL   M  
Sbjct: 358 NVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFD 417

Query: 128 DKN-VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++N ++PN  T+N+L+   C +  + +A  +  KMV  G   + VTYN L     + G+ 
Sbjct: 418 NENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKI 477

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++  ++ +    PN  T  I++ G+CK   +  A      M+   ++P L  +N+L
Sbjct: 478 KEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTL 537

Query: 247 IKGFLDIKDSDGVDKALTLMEEFG---VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           +     +     +++A +L +E G    +PD+++F+T++D    AG     +E+   MV+
Sbjct: 538 MA---SLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVE 594

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ PD   FS L     + GE  +A+S L  M   G  P+ +++ +++ G  +      
Sbjct: 595 MGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTE 654

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
            +++  +M   G   + K   T+L     + Q     ELL
Sbjct: 655 IINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 694



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 199/409 (48%), Gaps = 7/409 (1%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           KP     +   +++ G    +     ++  L R       + LI ++ +  + PD + +N
Sbjct: 124 KPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYN 183

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +IN   ++  + EA+ +  +M+ +GC P + T  TL+ G    G+ +E+++LL+ M + 
Sbjct: 184 TLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKK- 242

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K    +   Y  L+  +C+  +++    +  +M+  GI  + VTY+ L     + G+   
Sbjct: 243 KGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKE 302

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  +L  M  + + P+  T   ++ G CK+G    AM  L  M E    P+ V +N L+ 
Sbjct: 303 ANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLS 362

Query: 249 GFLDIKDSDGVD--KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV--KA 304
           G    K+   +D  K L +M E G K DVVT++T+M      G + +  ++F+ M   + 
Sbjct: 363 GL--CKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNEN 420

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
            +EP++  F++L  G  + G   KA  I   M K G   N+V +  ++ G   A K++ A
Sbjct: 421 CLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEA 480

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           M +++++ ++G  PN  TY  L+ G+ + +    A+ L   M   G+ P
Sbjct: 481 MELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNP 529



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 193/397 (48%), Gaps = 3/397 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F+ ++ +G    ++TY+ LV  L R  ++K   ++++ + + G+ PD + +  +I+   
Sbjct: 271 LFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLC 330

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G    AM +   M + G +P+  TYN L+ G    G   ++ K+L++M + K  K + 
Sbjct: 331 KDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIE-KGKKADV 389

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMV--ASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
            TYN L++  C K  ++EA  +   M    + ++P+  T+N L     + G   +A ++ 
Sbjct: 390 VTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH 449

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
            +M       N  T  +++ G  K G +++AM    ++ +L   PN   ++ LI GF  +
Sbjct: 450 RKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKM 509

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
           +  +        M   G+ P +  ++T+M +    G + + + +F +M  A  EPDI  F
Sbjct: 510 RMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISF 569

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           + +  G ++AG+ Q  + +   M + G+ P+ + F+T+I+      ++  A S  E+M  
Sbjct: 570 NTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVA 629

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
            G  P+   Y++LL G            LL  M  KG
Sbjct: 630 SGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 666



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 198/442 (44%), Gaps = 48/442 (10%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD-- 81
           G  P  +T TTL+  L +  R    + L+  ++K G   D +L+  +I+    +GN+D  
Sbjct: 209 GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRG 268

Query: 82  ---------------------------------EAMKIFQKMKDSGCKPTTSTYNTLIKG 108
                                            EA  +   M + G  P   TY  LI G
Sbjct: 269 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 328

Query: 109 YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP 168
               G+   ++ LL LM + K  +P++ TYN+L+   C +  + +A+ ++  M+  G + 
Sbjct: 329 LCKDGRATHAMDLLNLMVE-KGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 387

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ--VRPNERTCGIIVSGYCKEGNMEDAMR 226
           D VTYNTL +     G+   A ++   M +N+  + PN  T  +++ G CKEG +  A++
Sbjct: 388 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 447

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMD 283
              +M +     NLV +N L+ G L    +  + +A+ L   + + G  P+  T+S ++D
Sbjct: 448 IHRKMVKKGSCGNLVTYNMLLGGCLK---AGKIKEAMELWKQVLDLGFVPNSFTYSILID 504

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
            +    ++   + +F +M   G+ P +  ++ L     + G  ++A+S+   M      P
Sbjct: 505 GFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEP 564

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           +++ F T+I G   A   Q    +  KM E+G+ P+  T+ TL+    +  +   A+  L
Sbjct: 565 DIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSAL 624

Query: 404 QVMEEKGVRPKKSTIQLVADSW 425
           + M   G  P      LV DS 
Sbjct: 625 ERMVASGFTPD----ALVYDSL 642



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 186/408 (45%), Gaps = 37/408 (9%)

Query: 44  RFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYN 103
           +F   +SL        + P     N +++A + S N   A  ++++M      P+  + +
Sbjct: 54  QFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLS 113

Query: 104 TLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVA 163
            LI+ + +  KP+    ++ L+ + +    N    NI+++  C    + EA  ++ +M  
Sbjct: 114 ALIECFADAQKPQLGFGVVGLVLK-RGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGR 172

Query: 164 SGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED 223
             + PD V+YNTL     +  +   A  +L EM+     PN  TC  ++ G CK+G M++
Sbjct: 173 KSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDE 232

Query: 224 AMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD 283
           AM  L  MK+              KGF                       DVV + T++ 
Sbjct: 233 AMELLEAMKK--------------KGF---------------------DADVVLYGTLIS 257

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
            + + G + + +E+FD+M+  GI  ++  +S L  G  R G+ ++A ++L +M ++G+HP
Sbjct: 258 GFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHP 317

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           +VV +T +I G C   +   AM +   M E G  P+  TY  LL G  +      A ++L
Sbjct: 318 DVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKIL 377

Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSM-PN 450
           ++M EKG +    T   +       G   EA ++  S  ++   + PN
Sbjct: 378 RMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPN 425



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 188/412 (45%), Gaps = 5/412 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P+  + + L+      ++ +    ++  V K G   +  + N ++     +G V EAM +
Sbjct: 107 PSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGL 166

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            ++M      P   +YNTLI G     K +E++ LL  M +     PN  T   L+   C
Sbjct: 167 IREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM-EAAGCFPNSVTCTTLMDGLC 225

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               ++EA  ++  M   G   D V Y TL   +   G   R +++  EM    +  N  
Sbjct: 226 KDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVV 285

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL-DIKDSDGVDKALTL 265
           T   +V G C+ G  ++A   L  M E  +HP++V +  LI G   D + +  +D  L L
Sbjct: 286 TYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMD-LLNL 344

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M E G +P  VT++ ++      GL+    +I   M++ G + D+  ++ L KG    G+
Sbjct: 345 MVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGK 404

Query: 326 PQKAESILTSM--RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
             +A  +  SM   +  + PNV  F  +I G C   ++ +A+ I+ KM + G   NL TY
Sbjct: 405 VDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTY 464

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
             LL G  +A +   A EL + + + G  P   T  ++ D +  + +   AK
Sbjct: 465 NMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAK 516



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 113/231 (48%), Gaps = 5/231 (2%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N+L+G     GK  EA  ++  +++ G  P   TY+ L+    + +       L  ++  
Sbjct: 465 NMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRT 524

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+ P    +N ++ +  + G++++A  +FQ+M ++ C+P   ++NT+I G    G   +
Sbjct: 525 HGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD-FQ 583

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
            +K LQ+   +  ++P+  T++ L+        ++EA + + +MVASG  PDA+ Y++L 
Sbjct: 584 FVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLL 643

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           +  +  G+T     +L +M       + +    I++  C      D M  L
Sbjct: 644 KGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 694



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L  +G   +A  +F  +      P +I++ T++    +   F+ +  L  K+ + G+
Sbjct: 538 MASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGL 597

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD++ F+ +IN  S+ G +DEA    ++M  SG  P    Y++L+KG  + G   E + 
Sbjct: 598 RPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIIN 657

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
           LL  M+    V        IL    C  +SI+E
Sbjct: 658 LLHQMAAKGTVLDRKIVSTILT---CLCHSIQE 687


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/507 (25%), Positives = 228/507 (44%), Gaps = 40/507 (7%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+  G+  EA+ +F     +   P  ITY  L+  L    + K   SL  ++   G++P 
Sbjct: 100 LIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPV 159

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCK--------------------------- 96
            +    ++NA  +SGN++ A++ F+KM    C                            
Sbjct: 160 VLTCKFLLNALCKSGNLELALRYFEKMSSIPCAATWTILIDGLFRAIRVDEACYYFEEMK 219

Query: 97  ----PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIE 152
               P   TY  +I G    GK  E+ ++LQ M       P    Y  ++   C    + 
Sbjct: 220 HTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPV-----PTLANYTSVIGGHCKAGDMG 274

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           +A++++  M   G Q D +TYNTL   + +  E  RA ++L EM++N   P+  T  I++
Sbjct: 275 KAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILI 334

Query: 213 SGYCKEGNMEDAMRFLYRMK-ELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           +G C+   + +A   L  ++ E +  PN+V +N+LI GF      +   +    M   G 
Sbjct: 335 AGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQ 394

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            PDVVT+ST++    +AG   +     ++MV   I P + V+S +  G  RAGE   A +
Sbjct: 395 HPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAAST 454

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +  SM   G  PN+ ++ ++I G C   ++  A    ++M E G +P+  TY TL+ G  
Sbjct: 455 VFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLC 514

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
              +   A +L     E+G+   +++  +V  S R +    +A+RVL+       S    
Sbjct: 515 RWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCL---EQAQRVLRVVLATGNSPTAF 571

Query: 452 KDEIAVESIHRKQNLSASNSTFLQIPG 478
                +ES+ ++ NL+ +      + G
Sbjct: 572 FYATVIESLCKENNLAEARQLLEDMIG 598



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 194/453 (42%), Gaps = 11/453 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N LV  GK  EA  +    ++E   PTL  YT+++    +         L+  +++ G 
Sbjct: 233 INGLVKAGKVAEAERV----LQEMPVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGY 288

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + D++ +N +I+       +D A ++ ++MK +   P   TY+ LI G     +  E+  
Sbjct: 289 QGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARD 348

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  +  + +  PN  +YN L+  +     + +A+ +  +MV +G  PD VTY+TL R  
Sbjct: 349 LLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGL 408

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A   L EM   ++ P       ++SG C+ G ++ A      M      PNL
Sbjct: 409 CNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNL 468

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL--MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
            V+NSLI G    K     D  L +  M E G  PD VT+ T++          +  +++
Sbjct: 469 AVYNSLIYGL--CKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLY 526

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
              ++ GIE      +++    +R  E  +A+ +L  +   G  P    + TVI   C  
Sbjct: 527 VRSLEQGIEISETSCNVVIAS-LRCLE--QAQRVLRVVLATGNSPTAFFYATVIESLCKE 583

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
             +  A  + E M   GI P+  T + L+       +   A   L+ M   G +P   T 
Sbjct: 584 NNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTY 643

Query: 419 QLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
             + ++    G   EA  VL+         P++
Sbjct: 644 STLLNALFKAGKPSEAHVVLRRLISHTSCFPDE 676



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/450 (22%), Positives = 198/450 (44%), Gaps = 43/450 (9%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVE-KDGMKPDSILFNAMINACSESGNVDEAMK 85
           P + TY  L+A L R KR      L+  +  +D   P+ + +N +I+  S++  V++A +
Sbjct: 325 PDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQ 384

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +F +M  +G  P   TY+TLI+G  N G+  E+   L+ M   K + P    Y+ ++   
Sbjct: 385 LFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMV-GKKILPKVPVYSSVISGL 443

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C    ++ A  V   MVA+G QP+   YN+L     + G    A+  + EM      P+ 
Sbjct: 444 CRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDG 503

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T G ++ G C+    ++A     R  E  +  +    N +I     ++ +    + L +
Sbjct: 504 VTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQ---RVLRV 560

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD---------------- 309
           +   G  P    ++T++++      + + +++ +DM+ AGI+PD                
Sbjct: 561 VLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDK 620

Query: 310 -------------------IHVFSILAKGYVRAGEPQKAESILTSMRKY-GVHPNVVMFT 349
                              +  +S L     +AG+P +A  +L  +  +    P+ + + 
Sbjct: 621 AVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYV 680

Query: 350 TVISGWCNAVKMQRAMSIYEKM-CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
            +I+ + N  +++ A ++ +++  + GI  ++  Y TLL G    +      ELL+ M+ 
Sbjct: 681 GLIAAYSNQDQVEEARNVLQELKSKWGIQ-SIVAYNTLLKGLFRTRNLQMVYELLREMKR 739

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
                 ++T  ++   +  +G    A RVL
Sbjct: 740 NEFVVNEATFNILIQGFCRLGQTDRAVRVL 769



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 120/238 (50%), Gaps = 3/238 (1%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
            +A  +   ++  G+ PT   Y T++ +L ++        L+  +   G+KPD    +A+
Sbjct: 552 EQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDAL 611

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           + A         AM   ++M   G KP+  TY+TL+      GKP E+  +L+ +    +
Sbjct: 612 VGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTS 671

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS-GIQPDAVTYNTLARAYAQYGETYRA 189
             P++  Y  L+ A+ +++ +EEA NV+ ++ +  GIQ   V YNTL +   +       
Sbjct: 672 CFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQ-SIVAYNTLLKGLFRTRNLQMV 730

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            ++L EM+ N+   NE T  I++ G+C+ G  + A+R L  MK++ + P+  +   L+
Sbjct: 731 YELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMKKV-LTPSAAIIKFLV 787



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 130/273 (47%), Gaps = 14/273 (5%)

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           TYN    A       EEA+ +  +     + PD++TY  L R    +G+   A  +  EM
Sbjct: 92  TYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEM 151

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG-FLDIKD 255
            +  +RP   TC  +++  CK GN+E A+R+  +M  +   P    +  LI G F  I+ 
Sbjct: 152 VDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSI---PCAATWTILIDGLFRAIR- 207

Query: 256 SDGVDKALTLMEEF--GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
              VD+A    EE      P+  T++ +++    AG + + + +  +M      P +  +
Sbjct: 208 ---VDEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPV----PTLANY 260

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           + +  G+ +AG+  KA  +L  M++ G   + + + T+I G C   ++ RA  + E+M  
Sbjct: 261 TSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKS 320

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
               P++ TY+ L+ G   AK+   A +LL  +
Sbjct: 321 NDFVPDIFTYDILIAGLCRAKRLSEARDLLGTL 353



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/403 (19%), Positives = 176/403 (43%), Gaps = 41/403 (10%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  EAH     ++ +   P +  Y+++++ L R     +  ++   +  +G +P+
Sbjct: 408 LCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPN 467

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             ++N++I    ++G + +A    ++M + GC P   TY TLI G     + +E+  L  
Sbjct: 468 LAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLY- 526

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           + S ++ ++ ++ + N+++    S   +E+A  V+  ++A+G  P A  Y T+  +  + 
Sbjct: 527 VRSLEQGIEISETSCNVVI---ASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKE 583

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                A Q+L +M    ++P+  T   +V   C++     AM FL  M  L   P++  +
Sbjct: 584 NNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTY 643

Query: 244 NSLIKGFLD---------------------------------IKDSDGVDKALTLMEEFG 270
           ++L+                                        + D V++A  +++E  
Sbjct: 644 STLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELK 703

Query: 271 VK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
            K     +V ++T++        +    E+  +M +     +   F+IL +G+ R G+  
Sbjct: 704 SKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTD 763

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
           +A  +L+ M+K  + P+  +   ++     A + Q +  + ++
Sbjct: 764 RAVRVLSEMKKV-LTPSAAIIKFLVDELARAEREQESKDLVKR 805



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 20/78 (25%), Positives = 42/78 (53%)

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
           +H ++   +  +R G+ ++A  +        + P+ + +  +I G CN  K++ A S+YE
Sbjct: 90  VHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYE 149

Query: 370 KMCEIGINPNLKTYETLL 387
           +M + G+ P + T + LL
Sbjct: 150 EMVDRGLRPVVLTCKFLL 167


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 184/363 (50%), Gaps = 6/363 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P +  Y  L+ AL R+    +++ +   + K G+ P+   +N +I A  ++  VD A K+
Sbjct: 67  PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 126

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M   GC P   ++ T++ G   +G+ EE+   L          P   +YN +V A C
Sbjct: 127 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFL------AETVPVQASYNAVVHALC 180

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            +  + E ++VV +MV  G+QP+ VTY T+  A+ +  E   A  +L  M +    PN  
Sbjct: 181 GEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVL 240

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   +V G+ ++G + DA+   + M +    P+ + +N LI+G   I D  G       M
Sbjct: 241 TFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSM 300

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           +   + P+  T+ST++D +S+AG +     I+++M  +G +P++ V++ +     +    
Sbjct: 301 KRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMF 360

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +AES++  M      PN V F T+I   C+  ++ RA++++  M   G +PN +TY  L
Sbjct: 361 DQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNEL 420

Query: 387 LWG 389
           L G
Sbjct: 421 LHG 423



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 181/384 (47%), Gaps = 1/384 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G+ +  E   + N +++ G +P ++TYTT+V A  + +  +   ++++++   G  P+
Sbjct: 179 LCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPN 238

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + F A++    E G V +A+ ++  M D G  P+T +YN LI+G   +G  + +L    
Sbjct: 239 VLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFN 298

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M ++  + PN  TY+ LV  + +   ++ A  +  +M +SG +P+ V Y  +     + 
Sbjct: 299 SMKRNA-LLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKK 357

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
               +AE ++ +M  +   PN  T   ++   C  G +  A+   + M+    HPN   +
Sbjct: 358 MMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTY 417

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N L+ G     +       +  M   G +  +VT++T+++      +      +   M+ 
Sbjct: 418 NELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMV 477

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GI+PD   F+ +   Y + G+   A  +L  M       NVV +T +IS  CN  K+  
Sbjct: 478 QGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSN 537

Query: 364 AMSIYEKMCEIGINPNLKTYETLL 387
           AM    KM   GI PN  T+  L+
Sbjct: 538 AMVYLLKMLYEGICPNEATWNVLV 561



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 162/384 (42%), Gaps = 40/384 (10%)

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCK-PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           A I A + +G+ D A+K F +  D GC+ P    YN L+            + +   M +
Sbjct: 38  AAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRK 97

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              V PN  TYN+L+RA C  + ++ A  ++ +M   G  PD V++ T+     + G   
Sbjct: 98  -AGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVE 156

Query: 188 RAEQMLF------------------------------EMQNNQVRPNERTCGIIVSGYCK 217
            A   L                               EM    ++PN  T   IV  +CK
Sbjct: 157 EARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCK 216

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG-VDKALTL---MEEFGVKP 273
              +  A   L RM  +   PN++ F +L+KGF +    DG V  AL++   M + G  P
Sbjct: 217 ARELRMACAILARMVSMGCTPNVLTFTALVKGFFE----DGKVHDALSMWHWMVDEGWAP 272

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
             ++++ ++      G +    + F+ M +  + P+   +S L  G+  AG+   A  I 
Sbjct: 273 STISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIW 332

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M+  G  PNVV++T +I   C  +   +A S+ +KM      PN  T+ TL+    + 
Sbjct: 333 NEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDC 392

Query: 394 KQPWRAEELLQVMEEKGVRPKKST 417
            +  RA  +   M   G  P   T
Sbjct: 393 GRVGRALNVFHGMRRNGCHPNDRT 416



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 148/338 (43%), Gaps = 5/338 (1%)

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
           +G+VD      Q+M+  G   T       I  +   G  + +LK     S      P  R
Sbjct: 11  AGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVR 70

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
            YN L+ A   +N +     V   M  +G+ P+  TYN L RA  Q      A +ML EM
Sbjct: 71  VYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEM 130

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
                 P+E + G IVSG CK G +E+A  FL      E  P    +N+++         
Sbjct: 131 SRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLA-----ETVPVQASYNAVVHALCGEFRM 185

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
             V   +  M + G++P+VVT++TI+DA+  A  +     I   MV  G  P++  F+ L
Sbjct: 186 WEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTAL 245

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
            KG+   G+   A S+   M   G  P+ + +  +I G C    ++ A+  +  M    +
Sbjct: 246 VKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNAL 305

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            PN  TY TL+ G+  A     A  +   M+  G +P 
Sbjct: 306 LPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPN 343



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 119/244 (48%), Gaps = 1/244 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A  I+N +   G +P ++ YT ++  L ++  F    SLI K+  D   P+++ F
Sbjct: 323 GDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTF 382

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I    + G V  A+ +F  M+ +GC P   TYN L+ G    G  +++  ++  M  
Sbjct: 383 NTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEM-L 441

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +   + +  TYN ++   C     + A  ++ +M+  GIQPDA T+N +  AY + G+  
Sbjct: 442 NNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVS 501

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +L +M       N     I++S  C +G + +AM +L +M    + PN   +N L+
Sbjct: 502 IAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLV 561

Query: 248 KGFL 251
           +   
Sbjct: 562 RAIF 565



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/298 (21%), Positives = 122/298 (40%), Gaps = 32/298 (10%)

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH-PNLVV 242
           G+    +  L EM+   V   E      +  + + G+ + A++  YR  +L    P + V
Sbjct: 12  GDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRV 71

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +N L+   L       V      M + GV P+V T++ ++ A      +   +++ D+M 
Sbjct: 72  YNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMS 131

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAE------------------------------SI 332
           + G  PD      +  G  + G  ++A                               S+
Sbjct: 132 RKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSV 191

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           +  M + G+ PNVV +TT++  +C A +++ A +I  +M  +G  PN+ T+  L+ G+ E
Sbjct: 192 VNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFE 251

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
             +   A  +   M ++G  P   +  ++      IG  + A     S + +   +PN
Sbjct: 252 DGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRN-ALLPN 308



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 5/182 (2%)

Query: 2   NILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N L+G+    G+   A  +F+ +   G  P   TY  L+  L R+   K   +++ ++  
Sbjct: 383 NTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLN 442

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
           +G +   + +N +IN   +      AM +  +M   G +P   T+N +I  Y   GK   
Sbjct: 443 NGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSI 502

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +  LL  M+   N   N   Y IL+   C++  +  A   + KM+  GI P+  T+N L 
Sbjct: 503 AACLLGQMNA-VNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLV 561

Query: 178 RA 179
           RA
Sbjct: 562 RA 563


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 205/408 (50%), Gaps = 1/408 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA    + ++ +G R + I+Y  L+  + +    ++ + L+ ++E+  ++P+
Sbjct: 138 LCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPN 197

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            ++++ +I+   +   VDEA  ++ +M   G  P   TY+ L+ G+  VG+   ++ LL 
Sbjct: 198 VVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLN 257

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  + N+ P+  TY ILV A C +  ++EA NV+  MV + +  D V Y+TL   Y   
Sbjct: 258 EMVLE-NINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLV 316

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E   A+++ + M    V P+     I+++G CK   +++A+     + +  + P+ V +
Sbjct: 317 NEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTY 376

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            SLI           V      M + G  PDV+T++ ++DA    G + +   +F+ M  
Sbjct: 377 TSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKD 436

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
             I P+++ F+IL  G  + G  + A      +   G   NV  +T +I+G C    +  
Sbjct: 437 QAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDE 496

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           A+++  +M + G   +  T+E ++  + +  +  +AE+L++ M  +G+
Sbjct: 497 ALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/437 (24%), Positives = 201/437 (45%), Gaps = 42/437 (9%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   T   ++       +     S +SK+ K G +P++I  N ++      G V EA++ 
Sbjct: 91  PDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRF 150

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             K+   G + +  +Y  LI G   +G+   +++LL+ + +  +++PN   Y++++   C
Sbjct: 151 HDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIER-WSIRPNVVIYSMIIDRLC 209

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               ++EA+++  +MV  GI PD VTY+ L   +   G+  RA  +L EM    + P+  
Sbjct: 210 KDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIY 269

Query: 207 TCGIIVSGYCKEGNMED-----------------------------------AMRFLYRM 231
           T  I+V   CKEG +++                                   A R  Y M
Sbjct: 270 TYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTM 329

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSA 288
            ++ V P++  ++ +I G   IK    VD+AL L EE   K   PD VT+++++D    +
Sbjct: 330 TQMGVTPDVHCYSIMINGLCKIKR---VDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKS 386

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
           G +    ++FD+M+  G  PD+  ++ L     + G   +A ++   M+   + PNV  F
Sbjct: 387 GRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTF 446

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           T ++ G C   +++ A+  ++ +   G   N++TY  ++ G  +      A  L   ME+
Sbjct: 447 TILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMED 506

Query: 409 KGVRPKKSTIQLVADSW 425
            G      T +++  ++
Sbjct: 507 NGCISDAVTFEIMIRAF 523



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 35/254 (13%)

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
           N +DA+     M  +   P+   FN ++   +++K           ME   V+PD  T +
Sbjct: 38  NADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLN 97

Query: 280 TIMDAWSSAG--------------------------------LMGKCQE---IFDDMVKA 304
            I++ +   G                                L GK +E     D ++  
Sbjct: 98  IIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQ 157

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G       + IL  G  + GE + A  +L  + ++ + PNVV+++ +I   C    +  A
Sbjct: 158 GFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEA 217

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             +Y +M   GI+P++ TY  L+ G+    Q  RA +LL  M  + + P   T  ++ D+
Sbjct: 218 YDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDA 277

Query: 425 WRAIGLAREAKRVL 438
               G  +EA+ VL
Sbjct: 278 LCKEGKVKEAENVL 291



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 63/125 (50%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G    A  +FN + ++  RP + T+T L+  L +  R K+ L     +   G 
Sbjct: 415 IDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGY 474

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             +   +  MIN   + G +DEA+ +  +M+D+GC     T+  +I+ + +  + +++ K
Sbjct: 475 CLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEK 534

Query: 121 LLQLM 125
           L++ M
Sbjct: 535 LVREM 539


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 220/471 (46%), Gaps = 39/471 (8%)

Query: 15  YIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINAC 74
           Y F CL   G  P +  ++T++ A  +  R    + L SK+EK G+ P+ + +N +I+  
Sbjct: 244 YDFICL--GGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGL 301

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
            +SG +DEA +  +KM      P+  TY+  I G   + K +E+  +L+ MS+   V PN
Sbjct: 302 CKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFV-PN 360

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
           +  YN L+  +C   +I EA  +   M++ GI P++VT N+L + + +  +  +AE +L 
Sbjct: 361 EVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLE 420

Query: 195 EMQN-----NQ------------------------------VRPNERTCGIIVSGYCKEG 219
           EM       NQ                              +RPN+     +VSG CK G
Sbjct: 421 EMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAG 480

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
              +A+    R+      PN+V  N+LI G     +     K L  M E G+  D +T++
Sbjct: 481 KQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYN 540

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
           T++      G + +  E+ ++MVK GI+PDI+ F++L  G   A +  +A  +    +K 
Sbjct: 541 TLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKN 600

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
           G  PNV  +  +I G+C A K++   ++  ++    +  N   Y +L+  Y        A
Sbjct: 601 GYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAA 660

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
             L   M+ +GV    +T   +      IGL  +AK +L    ++   +PN
Sbjct: 661 FRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGL-LPN 710



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 188/386 (48%), Gaps = 5/386 (1%)

Query: 14  HYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA 73
           H+I   L+    RP     TTLV+ L +  +    + L  ++   G  P+ +  NA+I+ 
Sbjct: 452 HFIREMLLRN-LRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHG 510

Query: 74  CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP 133
             ++GN+ E +K+ + M + G      TYNTLI G    GK +E  +L + M + K ++P
Sbjct: 511 LCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVK-KGIQP 569

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           +  T+N+L+   C+ + I+EA  + ++   +G  P+  TY  +   Y +  +    E +L
Sbjct: 570 DIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLL 629

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
            E+ + ++  N      ++  YC  GNM  A R    MK   V  +   ++SL+ G  +I
Sbjct: 630 NELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNI 689

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
              D     L  M + G+ P+VV ++TI+  +S  G M K   +  +M    I P+   +
Sbjct: 690 GLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTY 749

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           +I+  G+ + G+ ++A  +L  M + G+ P+ V +    +G C   K++ A  + ++M  
Sbjct: 750 TIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSS 809

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRA 399
             +  +  TY TL+ G     QP  A
Sbjct: 810 GAVCLDEITYTTLIDG---CHQPSTA 832



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/477 (23%), Positives = 217/477 (45%), Gaps = 40/477 (8%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  EA+     +++E   P+LITY+  +  L + ++      ++ ++ + G  P+
Sbjct: 301 LCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPN 360

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLK 120
            +++N +I+   + GN+ EA+KI   M   G  P + T N+LI+G+     +G+ E  L+
Sbjct: 361 EVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLE 420

Query: 121 -----------------------------LLQLMSQD--KNVKPNDRTYNILVRAWCSKN 149
                                         L  + +   +N++PND     LV   C   
Sbjct: 421 EMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAG 480

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
              EA  +  +++  G  P+ VT N L     + G      ++L +M    +  +  T  
Sbjct: 481 KQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYN 540

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            ++SG CKEG +++       M +  + P++  FN L+ G     ++D +D+A  L  E 
Sbjct: 541 TLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLC---NADKIDEASRLWHEC 597

Query: 270 ---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              G  P+V T+  ++D +  A  + + + + +++V   +E +  V++ L + Y   G  
Sbjct: 598 KKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNM 657

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             A  +   M+  GV  +   +++++ G CN   +  A  + ++M + G+ PN+  Y T+
Sbjct: 658 NAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTI 717

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           + GY +  Q  +   +LQ M    + P K T  ++ D +  +G  +EA ++L    E
Sbjct: 718 IGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTE 774



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 183/407 (44%), Gaps = 36/407 (8%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           +++ ++  L  + RF + L  I ++    ++P+  L   +++   ++G   EA++++ ++
Sbjct: 433 SFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRL 492

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
              G  P   T N LI G    G  +E+LKLL+ M  ++ +  +  TYN L+   C +  
Sbjct: 493 LGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDM-LERGLVFDRITYNTLISGCCKEGK 551

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           ++E + +  +MV  GIQPD  T+N L        +   A ++  E + N   PN  T G+
Sbjct: 552 VKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGV 611

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++ GYCK   +E+    L  +   ++  N VV+NSLI+                      
Sbjct: 612 MIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIR---------------------- 649

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
                        A+   G M     + DDM   G+      +S L  G    G    A+
Sbjct: 650 -------------AYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAK 696

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +L  MRK G+ PNVV +TT+I G+    +M +   + ++M    I+PN  TY  ++ G+
Sbjct: 697 HLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGF 756

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
            +  +   A +LL  M EKG+ P   T     +     G   EA +V
Sbjct: 757 CKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKV 803



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 150/315 (47%)

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K + P+ +T   L+ +    N +++++ V   +   GI PD   ++T+  A+ +      
Sbjct: 215 KGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDD 274

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  +  +M+   V PN  T   I+ G CK G +++A RF  +M + +V P+L+ ++  I 
Sbjct: 275 AIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFIN 334

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G + ++  D  +  L  M E G  P+ V ++T++D +   G + +  +I DDM+  GI P
Sbjct: 335 GLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISP 394

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           +    + L +G+ ++ +  +AE++L  M   G+  N   F+ VI+  C   +   A+   
Sbjct: 395 NSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFI 454

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            +M    + PN     TL+ G  +A +   A EL   +  KG  P   T   +       
Sbjct: 455 REMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKA 514

Query: 429 GLAREAKRVLKSAEE 443
           G  +E  ++L+   E
Sbjct: 515 GNMQETLKLLRDMLE 529



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 8/208 (3%)

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
           ++ +L VH     F  L  GF             +L+ + G+ P + T + ++ +   A 
Sbjct: 184 KIADLLVHVYSTQFKHLGFGF--------AADVFSLLAKKGLFPSLKTCTFLLSSLVKAN 235

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
            + K  E++D +   GI PD+H+FS +   + +      A  + + M K GV PNVV + 
Sbjct: 236 ELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYN 295

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
            +I G C + ++  A    EKM +  ++P+L TY   + G  + ++   A  +L+ M E 
Sbjct: 296 NIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSEL 355

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRV 437
           G  P +     + D +  +G   EA ++
Sbjct: 356 GFVPNEVVYNTLIDGYCKMGNISEALKI 383



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 74/153 (48%)

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
            G   ++F  + K G+ P +   + L    V+A E +K+  +   +   G+ P+V +F+T
Sbjct: 202 FGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFST 261

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I+ +C   +   A+ ++ KM ++G+ PN+ TY  ++ G  ++ +   A    + M ++ 
Sbjct: 262 MINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEK 321

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           V P   T  +  +    +    EA  VLK   E
Sbjct: 322 VSPSLITYSVFINGLIKLEKIDEANCVLKEMSE 354



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 1/142 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   G   +A ++ + + +EG  P ++ YTT++   ++  +   +  ++ ++    +
Sbjct: 683 MHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNI 742

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   +  MI+   + G   EA K+  +M + G  P   TYN    G    GK EE+ K
Sbjct: 743 HPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFK 802

Query: 121 LLQLMSQDKNVKPNDRTYNILV 142
           +   MS    V  ++ TY  L+
Sbjct: 803 VCDEMSSGA-VCLDEITYTTLI 823



 Score = 42.4 bits (98), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 34/157 (21%), Positives = 70/157 (44%), Gaps = 13/157 (8%)

Query: 285 WSSAGLMGKCQEIFDDMVKAGI-EPDIHVFSI----LAKGYVRAGEPQKAESILTSMRKY 339
           +  A +M     +F+ ++   I +  +HV+S     L  G+        A  + + + K 
Sbjct: 164 FEIAQIMADFNLVFEPVIGVKIADLLVHVYSTQFKHLGFGF--------AADVFSLLAKK 215

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
           G+ P++   T ++S    A +++++  +Y+ +C  GI P++  + T++  + +  +   A
Sbjct: 216 GLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDA 275

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
             L   ME+ GV P   T   +       G   EA R
Sbjct: 276 IGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYR 312


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 199/400 (49%), Gaps = 8/400 (2%)

Query: 14  HYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA 73
           H++  C I  GH   L +Y  ++  L R  RF   LS++ K+ K G +PD +  +++IN 
Sbjct: 93  HHMEVCGI--GH--DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLING 148

Query: 74  CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP 133
             +   V +A+ +  KM++ G +P    YNT+I G   +G   ++++L   M +D  V+ 
Sbjct: 149 FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD-GVRA 207

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           +  TYN LV   C      +A  ++  MV   I P+ +T+  +   + + G+   A ++ 
Sbjct: 208 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 267

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
            EM    V P+  T   +++G C  G +++A + L  M      P++V +N+LI GF   
Sbjct: 268 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 327

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
           K  D   K    M + G+  D +T++TI+  +  AG     QEIF  M      P+I  +
Sbjct: 328 KRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTY 384

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           SIL  G       +KA  +  +M+K  +  ++  +  VI G C    ++ A  ++  +  
Sbjct: 385 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 444

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            G+ P++ +Y T++ G+   +Q  +++ L + M+E G+ P
Sbjct: 445 KGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/433 (23%), Positives = 202/433 (46%), Gaps = 22/433 (5%)

Query: 19  CLIEEGHRPTLITYTTLVAALTRQKRFKSI-----LSLISKVEKDGMKPDSILFNAMINA 73
           CL+++G+ P ++ + +     T   +  S+     + L  K+ +    P  + F+ +++ 
Sbjct: 20  CLLQKGN-PVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSK 78

Query: 74  CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP 133
            ++S N D  + +F  M+  G      +YN +I       +   +L ++  M +    +P
Sbjct: 79  IAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMK-FGYEP 137

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           +  T + L+  +C  N + +A ++V KM   G +PD V YNT+     + G    A ++ 
Sbjct: 138 DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELF 197

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
             M+ + VR +  T   +V+G C  G   DA R +  M   ++ PN++ F ++I  F+  
Sbjct: 198 DRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVK- 256

Query: 254 KDSDGVDKALTLMEEFG---VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
                  +A+ L EE     V PDV T++++++     G + + +++ D MV  G  PD+
Sbjct: 257 --EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             ++ L  G+ ++    +   +   M + G+  + + + T+I G+  A +   A  I+ +
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 374

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEE---LLQVMEEKGVRPKKSTIQLVADSWRA 427
           M      PN++TY  LL+G       WR E+   L + M++  +    +T  +V      
Sbjct: 375 M---DSRPNIRTYSILLYGLC---MNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428

Query: 428 IGLAREAKRVLKS 440
           IG   +A  + +S
Sbjct: 429 IGNVEDAWDLFRS 441



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 149/301 (49%), Gaps = 4/301 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G  ++A  +F+ +  +G R   +TY +LVA L    R+     L+  +    + P+ I F
Sbjct: 188 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF 247

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            A+I+   + G   EAMK++++M      P   TYN+LI G    G+ +E+ ++L LM  
Sbjct: 248 TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT 307

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K   P+  TYN L+  +C    ++E   +  +M   G+  D +TYNT+ + Y Q G   
Sbjct: 308 -KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A+++   M +   RPN RT  I++ G C    +E A+     M++ E+  ++  +N +I
Sbjct: 367 AAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G   I + +        +   G+KPDVV+++T++  +       K   ++  M + G+ 
Sbjct: 424 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483

Query: 308 P 308
           P
Sbjct: 484 P 484



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 39/273 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++ V +GK  EA  ++  +      P + TY +L+  L    R      ++  +   G 
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + +N +IN   +S  VDE  K+F++M   G    T TYNT+I+GY   G+P+ + +
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE 370

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M      +PN RTY+IL+   C    +E+A  +   M  S I+ D  TYN      
Sbjct: 371 IFSRMDS----RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN------ 420

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                                        I++ G CK GN+EDA      +    + P++
Sbjct: 421 -----------------------------IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDV 451

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
           V + ++I GF   +  D  D     M+E G+ P
Sbjct: 452 VSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 67/149 (44%)

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           ++F  M+++   P I  FS +     ++       S+   M   G+  ++  +  VI+  
Sbjct: 55  DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C   +   A+S+  KM + G  P++ T  +L+ G+ +  + + A +L+  MEE G RP  
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEED 444
                + D    IGL  +A  +    E D
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERD 203


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/436 (23%), Positives = 211/436 (48%), Gaps = 1/436 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A   F  +I+ G  P + +Y  L+  L      +  L   + +E  G++PD + +
Sbjct: 284 GSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTY 343

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N + N     G +  A K+ Q+M  +G  P   TY  LI G+  +G  EES KL + M  
Sbjct: 344 NILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKM-L 402

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + +K +  TY +L+ + C    I+EA  ++++M   G++PD +TY+ L     + G   
Sbjct: 403 SQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVE 462

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++  EM + ++ PN   C  I+SG  ++G + +A  +   + + +V   ++++N +I
Sbjct: 463 EAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMI 522

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G+  + +     ++   + E G+ P +VTF++++  +   G + +  ++ D +   G+ 
Sbjct: 523 DGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLV 582

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P    ++ L  GY   G+      +L  M    + P  + +T V+ G C   ++  ++ +
Sbjct: 583 PTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQL 642

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
            + M   G+ P+  TY T++  + +A    +A +L   M +  ++P   T  ++ +    
Sbjct: 643 LKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCV 702

Query: 428 IGLAREAKRVLKSAEE 443
            G  ++A R+L + ++
Sbjct: 703 YGNLKDADRLLVTLQD 718



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/413 (23%), Positives = 188/413 (45%), Gaps = 7/413 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  EA  + + +   G +P L+TY+ L+  L ++   +  + L  ++    + P+
Sbjct: 420 LCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPN 479

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLK 120
           S + +A+I+   E G + EA   F  +  S        YN +I GY   GN+G+   S K
Sbjct: 480 SFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYK 539

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             Q++  +K + P   T+N L+  +C K  + EA  ++  +   G+ P +VTY TL   Y
Sbjct: 540 --QII--EKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGY 595

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+ +    ML EM+   ++P + T  ++V G CKEG + ++++ L  M    + P+ 
Sbjct: 596 CEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQ 655

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +N++I+ F    D     +    M +  ++P  VT++ +++     G +     +   
Sbjct: 656 ITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVT 715

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           +    I      ++ + K +   G+ Q A      M + G   ++  ++ VI+  C    
Sbjct: 716 LQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNL 775

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           +  A   +  M   GI P+      +L  +  +  P    E+  +M + G+ P
Sbjct: 776 ITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 145/301 (48%), Gaps = 3/301 (0%)

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           N+  +++L  A+     + +A  V+ KM    +Q    TYN+L          +      
Sbjct: 167 NNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYN-- 224

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
            E++ + V  NE T  I++ G C++  ++DA+ FL      E  P++V FN+L+ GF  +
Sbjct: 225 -EIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKM 283

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
              D       +M ++G+ PDV +++ ++     AG M +  E  +DM   G+EPDI  +
Sbjct: 284 GSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTY 343

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           +ILA G+   G    A  ++  M   G++P++V +T +I G C    ++ +  + EKM  
Sbjct: 344 NILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLS 403

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
            G+  ++ TY  LL    ++ +   A  LL  ME  G++P   T  ++       G   E
Sbjct: 404 QGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEE 463

Query: 434 A 434
           A
Sbjct: 464 A 464



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/469 (20%), Positives = 206/469 (43%), Gaps = 57/469 (12%)

Query: 2   NILVGKGKPHEAHYIFNCLIEE---GHRPTL---------------ITYTTLVAALTRQK 43
           +++  KG+  E   + N ++EE   G  P+L               + +  L  A +R +
Sbjct: 123 HVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNVVWDMLACAYSRAE 182

Query: 44  RFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYN 103
                L +++K++   ++     +N+++     +   D    ++ ++K SG      T  
Sbjct: 183 MVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHT---DIMWDVYNEIKASGVPQNEYTNP 239

Query: 104 TLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVA 163
            LI G     + ++++  L+  +  +   P+  ++N L+  +C   S++ A +    M+ 
Sbjct: 240 ILIDGLCRQSRLQDAVTFLR-ETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIK 298

Query: 164 SGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED 223
            G+ PD  +YN L       G    A +   +M+N+ V P+  T  I+ +G+   G +  
Sbjct: 299 YGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISG 358

Query: 224 AMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD---------------------------- 255
           A + + RM    ++P+LV +  LI G   + +                            
Sbjct: 359 AWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLS 418

Query: 256 ----SDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
               S  +D+A+ L   ME  G+KPD++T+S ++      G + +  E++++M    I P
Sbjct: 419 SLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYP 478

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           +  V S +  G    G   +A+    S+ K  V   ++++  +I G+     +  A+  Y
Sbjct: 479 NSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSY 538

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           +++ E GI+P + T+ +L++G+ +  +   A +LL  ++  G+ P   T
Sbjct: 539 KQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVT 587



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/456 (21%), Positives = 204/456 (44%), Gaps = 35/456 (7%)

Query: 13  AHYIFNCLIEE-GHRPTLITY---TTLVAALTRQKRFKSILSLISKVEKDGMKP------ 62
           A ++F+ L  E G R + +++   + +VA   + K  + +L+ + + E  G  P      
Sbjct: 98  ALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELL 157

Query: 63  ---------DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVG 113
                    ++++++ +  A S +  V +A+ +  KMK    + + +TYN+L+       
Sbjct: 158 CNSFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLY------ 211

Query: 114 KPEESLKLLQLMSQDKN------VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ 167
               +L+   +M    N      V  N+ T  IL+   C ++ +++A   + +       
Sbjct: 212 ----NLRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFG 267

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
           P  V++N L   + + G    A+     M    + P+  +  I++ G C  G+ME+A+ F
Sbjct: 268 PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEF 327

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
              M+   V P++V +N L  GF  +    G  K +  M   G+ PD+VT++ ++     
Sbjct: 328 TNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQ 387

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
            G + +  ++ + M+  G++  I  +++L     ++G   +A  +L  M   G+ P+++ 
Sbjct: 388 MGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLT 447

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           ++ +I G C    ++ A+ +YE+MC   I PN      ++ G  E      A+     + 
Sbjct: 448 YSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVT 507

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           +  V  +     ++ D +  +G   EA R  K   E
Sbjct: 508 KSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIE 543


>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
 gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
          Length = 538

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/452 (23%), Positives = 226/452 (50%), Gaps = 11/452 (2%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++E G +     +T L   L R+ +F  ++ L + +   G+      +  +++    +G 
Sbjct: 10  VVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGM 69

Query: 80  VDEAMKIFQKMKDSGC-KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
            ++A+++ +++  SG   PT   YN +I G     +  ++ K+L+ M ++ ++ PN  TY
Sbjct: 70  ANQALELVREL--SGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEE-SIVPNVFTY 126

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
            IL+   C  N  + A  V  +M  +G +P+ +TY TL +  ++ GE   A +++ E ++
Sbjct: 127 TILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRS 186

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
            ++  +  TC  IV G CK   ++DA++F+  M+++ V PN V +++L+ GF   +    
Sbjct: 187 LELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGF---RQHGE 243

Query: 259 VDKALTLMEE----FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           +D+ +   EE     G   +   +   +DA   AG + + ++  +++ ++G+ PD+  +S
Sbjct: 244 LDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYS 303

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
           +L   + RAG+   +  +L  MR+ GV P+VV ++T+I+  C   K Q A  + E M   
Sbjct: 304 MLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAA 363

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G  PN+ TY +++ G  ++ +      + ++M +    P   T  ++ +     G+   A
Sbjct: 364 GSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSA 423

Query: 435 KRVLKSAEEDRQSMPNKKDEIAVESIHRKQNL 466
            ++ +  +  R+        + + S+ R   L
Sbjct: 424 VKLFELIKSSREGPDAAAYSMVITSLCRAGKL 455



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 188/402 (46%), Gaps = 40/402 (9%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A+ +   ++EE   P + TYT L+  L R  + K    +  +++++G KP+ I +  +I
Sbjct: 106 DAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLI 165

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
              S +G +DEA+++  + +         T  T++ G     + +++LK ++ M Q   V
Sbjct: 166 QHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQ-MGV 224

Query: 132 KPNDRTYNILVR------------------------------------AWCSKNSIEEAW 155
           +PN+ TY+ LV                                     A C    ++ A 
Sbjct: 225 RPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRAR 284

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
             V ++  SG+ PD VTY+ L   +A+ G+   + ++L +M+ N V+P+  T   +++  
Sbjct: 285 KSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVL 344

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           CKE   +DA R L  M+     PN+V +NS++ G       D V +   +M +    PDV
Sbjct: 345 CKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDV 404

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE-PDIHVFSILAKGYVRAGEPQKAESILT 334
           VT+S IM+  S AG++    ++F +++K+  E PD   +S++     RAG+ ++A  +  
Sbjct: 405 VTYSIIMNGLSKAGMLDSAVKLF-ELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYH 463

Query: 335 SMRKYGVHPNVV-MFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
            M       N+      +++  C+A +   A  I E   E G
Sbjct: 464 GMEVTVAGDNICRALAGLVAALCDAERTDSARRIVEVASERG 505


>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
 gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
          Length = 495

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 182/373 (48%), Gaps = 8/373 (2%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +NA +NA  + G+  +A KIF  M    C P   TY  +++G  +  K + +L+LLQ M 
Sbjct: 40  YNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDM- 98

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + K + P     N+LV   C    ++ A+ + YK ++     D ++YN L     +  + 
Sbjct: 99  ESKMLTPTTFIVNMLVSCLCKNGKVDAAYEL-YKRLSDECSLDRISYNMLTYGLCKADQI 157

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM----KELEVHPNLVV 242
            RA  +  EM+ N V P+  T   ++ GYC+ G ME AM  L  M    K  +V P++  
Sbjct: 158 DRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYS 217

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +N++I GF   +        L  M + G  P+VVTF+T++D     G + +   +F+ MV
Sbjct: 218 YNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMV 277

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           +   EP    +++L  G+ RA    KA      M + GV PNV  +T +I G C+A K++
Sbjct: 278 ERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVE 337

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A+ I ++M   G  PN+ TY  ++    +  Q  RA +L    +  G R  K      A
Sbjct: 338 DALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFN--DAMGSRTAKCKPDSYA 395

Query: 423 DSWRAIGLAREAK 435
            S     L R++K
Sbjct: 396 YSTIIYWLCRQSK 408



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 161/356 (45%), Gaps = 40/356 (11%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N LV  G   +A  IF+ ++ +   P + TY  ++  L    +  + L L+  +E   +
Sbjct: 44  LNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKML 103

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSG--------------CK---------- 96
            P + + N +++   ++G VD A ++++++ D                CK          
Sbjct: 104 TPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAV 163

Query: 97  ----------PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK---NVKPNDRTYNILVR 143
                     P+  TYN L+ GY   G+ E+++ LL+ M + K   +V P+  +YN ++ 
Sbjct: 164 FGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVIS 223

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +C    +  A  V+ +M+ SG  P+ VT+NTL       G+   A  M   M      P
Sbjct: 224 GFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEP 283

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
              T  ++++G+ +   ++ A  +   M    V PN+  + +LI G  D    +   + L
Sbjct: 284 TAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEIL 343

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV---KAGIEPDIHVFSIL 316
             M   G +P+VVT++ ++ A    G + +  ++F+D +    A  +PD + +S +
Sbjct: 344 KRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTI 399



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 154/325 (47%), Gaps = 11/325 (3%)

Query: 100 STYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVY 159
           +T + +I    N+  P+ + ++ +  ++ ++ +    TYN  + A        +A  +  
Sbjct: 2   ATEDDVIHVLENIKSPKLASRVFKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFD 61

Query: 160 KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEG 219
            M+     P+  TY  + R      +T  A ++L +M++  + P      ++VS  CK G
Sbjct: 62  DMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNG 121

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVV 276
            + DA   LY+    E   + + +N L  G      +D +D+AL +   MEE  V P ++
Sbjct: 122 KV-DAAYELYKRLSDECSLDRISYNMLTYGLC---KADQIDRALAVFGEMEENAVVPSLL 177

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVK----AGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           T++ ++  +  AG M +   + ++M++    + + PD++ ++ +  G+ +A +   A  +
Sbjct: 178 TYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYV 237

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           L  M K G  PNVV F T++ G C   K+  A +++E M E    P   TY  L+ G+  
Sbjct: 238 LRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHAR 297

Query: 393 AKQPWRAEELLQVMEEKGVRPKKST 417
           A +  +A +    M  +GV P   T
Sbjct: 298 ALRIDKANDYFVDMLRRGVEPNVYT 322



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/249 (21%), Positives = 125/249 (50%), Gaps = 4/249 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P + +Y T+++   + ++  +   ++ ++ K G  P+ + FN +++    +G +DEA  +
Sbjct: 213 PDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAM 272

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F+ M +  C+PT  TY  LI G+    + +++      M + + V+PN  TY  L+   C
Sbjct: 273 FEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLR-RGVEPNVYTYTALIGGLC 331

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV---RP 203
             N +E+A  ++ +M ++G +P+ VTY  +  A  + G+  RA ++  +   ++    +P
Sbjct: 332 DANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKP 391

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +      I+   C++    +A  +  RM E ++     ++ ++  G   +++++ V++  
Sbjct: 392 DSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGLELVQETEKVERVC 451

Query: 264 TLMEEFGVK 272
                 G++
Sbjct: 452 LEASAHGIE 460



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 88/190 (46%), Gaps = 2/190 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA+ +F  ++E    PT +TYT L+    R  R          + + G++P+   +
Sbjct: 264 GKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTY 323

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ--LM 125
            A+I    ++  V++A++I ++M  +G +P   TY  +I      G+ E + KL    + 
Sbjct: 324 TALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMG 383

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           S+    KP+   Y+ ++   C ++   EA+    +MV S +      Y  +A       E
Sbjct: 384 SRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGLELVQE 443

Query: 186 TYRAEQMLFE 195
           T + E++  E
Sbjct: 444 TEKVERVCLE 453


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 199/401 (49%), Gaps = 11/401 (2%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G KP    +N MI+   + G+V+ A  +F++MK  G  P T TYN++I G+G VG+ +++
Sbjct: 90  GAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDT 149

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           +   + M +D   +P+  TYN L+  +C    + +      +M  +G++P+ V+Y+TL  
Sbjct: 150 VCFFEEM-KDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVD 208

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           A+ + G   +A +   +M+   + PNE T   ++  YCK GN+ DA R    M ++ V  
Sbjct: 209 AFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEW 268

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           N+V + +LI G    ++       L  M E  +K  VVTF  ++D      L+ K  + F
Sbjct: 269 NVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYF 328

Query: 299 DDMVKA-GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
             +    G++ +  +++ +  G  +  + + A ++   M + G+ P+   +T+++ G   
Sbjct: 329 GRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFK 388

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              +  A+++ +KM E G+  +L  Y +L+WG     Q  +A   L+ M  +G+ P +  
Sbjct: 389 QGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVL 448

Query: 418 IQLVADSWRAIGLAREA--------KRVLKSAEEDRQSMPN 450
              V      +G   EA        K  L +++ D  ++PN
Sbjct: 449 CISVLKKHYELGCINEAVELQSYLMKHQLLTSDND-NALPN 488



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 172/356 (48%), Gaps = 8/356 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ +  +G    A  +F  +   G  P  +TY +++    +  R    +    +++    
Sbjct: 102 IDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCC 161

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD I +NA+IN   + G + + ++ F++MK +G KP   +Y+TL+  +   G  ++++K
Sbjct: 162 EPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIK 221

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M +   + PN+ TY  L+ A+C   ++ +A+ +  +M+  G++ + VTY  L    
Sbjct: 222 FYVDMRR-VGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGL 280

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM-KELEVHPN 239
             +        +L EM    ++    T  +++ G CK   +  A+ +  R+  +  +  N
Sbjct: 281 CGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQAN 340

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
             ++ ++I G       + V+ A TL E+    G+ PD   ++++MD     G + +   
Sbjct: 341 AAIYTAMIDGLC---KGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALA 397

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           + D MV+ G++ D+  ++ L  G     + QKA S L  M   G+HP+ V+  +V+
Sbjct: 398 LRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVL 453



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 141/298 (47%), Gaps = 7/298 (2%)

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
           C P    ++ L     ++G  EE+++    M + + V P  R+ N L+  +      +  
Sbjct: 21  CVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFR-VFPKTRSCNGLLHKFAKLGKTDGV 79

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
                 M+ +G +P   TYN +     + G+   A  +  EM+   + P+  T   ++ G
Sbjct: 80  KRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDG 139

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GV 271
           + K G ++D + F   MK++   P+++ +N+LI  F        + K L    E    G+
Sbjct: 140 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK---LPKGLEFFREMKRNGL 196

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           KP+VV++ST++DA+   G+M +  + + DM + G+ P+ + ++ L   Y + G    A  
Sbjct: 197 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFR 256

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           +   M + GV  NVV +T +I G C        + + ++M E+ I   + T+  L+ G
Sbjct: 257 LANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDG 314



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 134/291 (46%)

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P    ++ L         +EEA     KM    + P   + N L   +A+ G+T   ++ 
Sbjct: 23  PGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 82

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             +M     +P   T  I++   CKEG++E A      MK   + P+ V +NS+I GF  
Sbjct: 83  FKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGK 142

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +   D        M++   +PDV+T++ +++ +   G + K  E F +M + G++P++  
Sbjct: 143 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVS 202

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           +S L   + + G  Q+A      MR+ G+ PN   +T++I  +C    +  A  +  +M 
Sbjct: 203 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEML 262

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           ++G+  N+ TY  L+ G    + P     LL  M E  ++    T  ++ D
Sbjct: 263 QVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLID 313



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/387 (20%), Positives = 159/387 (41%), Gaps = 77/387 (19%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK       F  +I  G +PT+ TY  ++  + ++   ++   L  +++  G+ PD++ +
Sbjct: 74  GKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTY 133

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N+MI+   + G +D+ +  F++MKD  C+P   TYN LI  +   GK  + L+  + M +
Sbjct: 134 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKR 193

Query: 128 DK----------------------------------NVKPNDRTYNILVRAWCSKNSIEE 153
           +                                    + PN+ TY  L+ A+C   ++ +
Sbjct: 194 NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSD 253

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A+ +  +M+  G++ + VTY  L      +        +L EM    ++    T  +++ 
Sbjct: 254 AFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLID 313

Query: 214 GYCKEGNMEDAMRFLYRM-KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF--- 269
           G CK   +  A+ +  R+  +  +  N  ++ ++I G       + V+ A TL E+    
Sbjct: 314 GLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCK---GNQVEAATTLFEQMAQK 370

Query: 270 GVKPDVVTFSTIMDA---------------------------------W--SSAGLMGKC 294
           G+ PD   ++++MD                                  W  S    + K 
Sbjct: 371 GLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKA 430

Query: 295 QEIFDDMVKAGIEPD-IHVFSILAKGY 320
           +   ++M+  GI PD +   S+L K Y
Sbjct: 431 RSFLEEMIGEGIHPDEVLCISVLKKHY 457



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 102/219 (46%)

Query: 219 GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTF 278
           G +E+A++   +MK   V P     N L+  F  +  +DGV +    M   G KP V T+
Sbjct: 39  GMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTY 98

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           + ++D     G +   + +F++M   G+ PD   ++ +  G+ + G           M+ 
Sbjct: 99  NIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 158

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
               P+V+ +  +I+ +C   K+ + +  + +M   G+ PN+ +Y TL+  + +     +
Sbjct: 159 MCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQ 218

Query: 399 AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           A +    M   G+ P + T   + D++  IG   +A R+
Sbjct: 219 AIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRL 257



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/301 (21%), Positives = 135/301 (44%), Gaps = 8/301 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N     GK  +    F  +   G +P +++Y+TLV A  ++   +  +     + + G+
Sbjct: 172 INCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 231

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   + ++I+A  + GN+ +A ++  +M   G +    TY  LI G      P E L 
Sbjct: 232 VPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLH 291

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS-GIQPDAVTYNTLARA 179
           LL  M +  ++K    T+ +L+   C    + +A +   ++    G+Q +A  Y  +   
Sbjct: 292 LLDEMVE-LDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDG 350

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             +  +   A  +  +M    + P+      ++ G  K+GN+ +A+    +M E  +  +
Sbjct: 351 LCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLD 410

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           L+ + SL+ G   +   + + KA + +EE    G+ PD V   +++      G + +  E
Sbjct: 411 LLAYTSLVWG---LSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVE 467

Query: 297 I 297
           +
Sbjct: 468 L 468


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 101/421 (23%), Positives = 203/421 (48%), Gaps = 1/421 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++E    P +  Y  +++   +  + ++   ++++++  G  PD + +N MI +      
Sbjct: 138 ILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRK 197

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +  A+ +  ++    C PT  TY  LI+     G   E++KLL+ M   + + P+  TYN
Sbjct: 198 LGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLA-RGLLPDMYTYN 256

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++R  C +  +E A  ++  + + G +PD ++YN L RA+   G+    E+++ EM + 
Sbjct: 257 AIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 316

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              PN+ T  I++S  C+ G +++A+  L  M E E+ P+   ++ LI         D  
Sbjct: 317 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 376

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
              +  M   G  PD+V ++TI+ A    G   +  EIF+ +   G  P++  ++ +   
Sbjct: 377 IGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISA 436

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
               G+  +A  ++ +M   G+ P+ + + ++IS  C    ++ A+ + + M + G  P 
Sbjct: 437 LWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPT 496

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + +Y  +L G  + ++   A  +   M EKG RP ++T  L+ +     G   EA  +  
Sbjct: 497 VISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELAN 556

Query: 440 S 440
           S
Sbjct: 557 S 557



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 195/390 (50%), Gaps = 3/390 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  + N +   G  P ++TY  ++ +L  +++    L+++ ++  D   P  I +  +I 
Sbjct: 166 ATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIE 225

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
           A    G ++EAMK+ ++M   G  P   TYN +I+G    G  E + +L+  ++  K  +
Sbjct: 226 ATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTS-KGCE 284

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+  +YNIL+RA+ ++   +E   +V +M + G +P+ VTY+ L  +  ++G    A  +
Sbjct: 285 PDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISV 344

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           L  M   ++ P+  +   ++S  CKEG ++ A+  +  M      P++V +N+++     
Sbjct: 345 LKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCK 404

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
             +++   +    +   G  P+V +++T++ A  S G   +   +   M+  GI+PD   
Sbjct: 405 NGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEIT 464

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++ L     R G  ++A  +L  M + G  P V+ +  V+ G C   ++  A+ ++ +M 
Sbjct: 465 YNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMI 524

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           E G  PN  TY  L+ G G A   WR E +
Sbjct: 525 EKGCRPNETTYILLIEGIGFAG--WRTEAM 552



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 193/439 (43%), Gaps = 43/439 (9%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK +E+ Y   CL+ +G+ P +I  T L+      K  +   S + ++ +   +PD   +
Sbjct: 92  GKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKA-SRVMEILESHTEPDVFAY 150

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           NA+I+   +   ++ A ++  +MK  G  P   TYN +I    N  K   +L +L  +  
Sbjct: 151 NAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLL 210

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D N  P   TY IL+ A   +  I EA  ++ +M+A G+ PD  TYN             
Sbjct: 211 D-NCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNA------------ 257

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
                                  I+ G CKEG +E A   +  +      P+++ +N L+
Sbjct: 258 -----------------------IIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILL 294

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           + FL+    D  +K +  M   G +P+ VT+S ++ +    G + +   +   M++  + 
Sbjct: 295 RAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELT 354

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD + +  L     + G    A  I+  M   G  P++V + T+++  C      +A+ I
Sbjct: 355 PDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEI 414

Query: 368 YEKMCEIGINPNLKTYETL---LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           + K+  +G  PN+ +Y T+   LW  G+     RA  ++  M  KG+ P + T   +   
Sbjct: 415 FNKLRGMGCPPNVSSYNTMISALWSCGDRS---RALGMVPAMISKGIDPDEITYNSLISC 471

Query: 425 WRAIGLAREAKRVLKSAEE 443
               GL  EA  +L   E+
Sbjct: 472 LCRDGLVEEAIGLLDDMEQ 490



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/348 (22%), Positives = 154/348 (44%), Gaps = 36/348 (10%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  +EA  +   ++  G  P + TY  ++  + ++   +    LI+ +   G +PD I 
Sbjct: 230 EGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVIS 289

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N ++ A    G  DE  K+  +M   GC+P   TY+ LI      G+ +E++ +L++M 
Sbjct: 290 YNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMI 349

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + K + P+  +Y+ L+ A C +  ++ A  ++  M+++G  PD V YNT           
Sbjct: 350 E-KELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNT----------- 397

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
                                   I++  CK GN   A+    +++ +   PN+  +N++
Sbjct: 398 ------------------------ILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTM 433

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I       D       +  M   G+ PD +T+++++      GL+ +   + DDM ++G 
Sbjct: 434 ISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGF 493

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
            P +  ++I+  G  +      A  +   M + G  PN   +  +I G
Sbjct: 494 RPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEG 541



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 110/220 (50%), Gaps = 1/220 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +   +IE+   P   +Y  L++AL ++ R    + ++  +  +G  PD + +
Sbjct: 336 GRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNY 395

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++ A  ++GN ++A++IF K++  GC P  S+YNT+I    + G    +L ++  M  
Sbjct: 396 NTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMIS 455

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K + P++ TYN L+   C    +EEA  ++  M  SG +P  ++YN +     +     
Sbjct: 456 -KGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRID 514

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
            A  M  EM     RPNE T  +++ G    G   +AM  
Sbjct: 515 DAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMEL 554



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 118/247 (47%), Gaps = 1/247 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            + +GK  E   +   +   G  P  +TY+ L+++L R  R    +S++  + +  + PD
Sbjct: 297 FLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPD 356

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +  ++ +I+A  + G +D A+ I   M  +GC P    YNT++      G   ++L++  
Sbjct: 357 TYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFN 416

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            + +     PN  +YN ++ A  S      A  +V  M++ GI PD +TYN+L     + 
Sbjct: 417 KL-RGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRD 475

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A  +L +M+ +  RP   +  I++ G CK   ++DA+     M E    PN   +
Sbjct: 476 GLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTY 535

Query: 244 NSLIKGF 250
             LI+G 
Sbjct: 536 ILLIEGI 542



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/258 (20%), Positives = 105/258 (40%), Gaps = 34/258 (13%)

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF------ 269
           CK G   +++ FL  +      P++++   LIKGF + K+ +   + + ++E        
Sbjct: 89  CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVF 148

Query: 270 ----------------------------GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
                                       G  PD+VT++ ++ +  +   +G    + D +
Sbjct: 149 AYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQL 208

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           +     P +  ++IL +  +  G   +A  +L  M   G+ P++  +  +I G C    +
Sbjct: 209 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 268

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           +RA  +   +   G  P++ +Y  LL  +    +    E+L+  M  +G  P K T  ++
Sbjct: 269 ERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 328

Query: 422 ADSWRAIGLAREAKRVLK 439
             S    G   EA  VLK
Sbjct: 329 ISSLCRFGRIDEAISVLK 346


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 199/400 (49%), Gaps = 8/400 (2%)

Query: 14  HYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA 73
           H++  C I  GH   L +Y  ++  L R  RF   LS++ K+ K G +PD +  +++IN 
Sbjct: 34  HHMEVCGI--GH--DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLING 89

Query: 74  CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP 133
             +   V +A+ +  KM++ G +P    YNT+I G   +G   ++++L   M +D  V+ 
Sbjct: 90  FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD-GVRA 148

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           +  TYN LV   C      +A  ++  MV   I P+ +T+  +   + + G+   A ++ 
Sbjct: 149 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 208

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
            EM    V P+  T   +++G C  G +++A + L  M      P++V +N+LI GF   
Sbjct: 209 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 268

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
           K  D   K    M + G+  D +T++TI+  +  AG     QEIF  M      P+I  +
Sbjct: 269 KRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTY 325

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           SIL  G       +KA  +  +M+K  +  ++  +  VI G C    ++ A  ++  +  
Sbjct: 326 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 385

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            G+ P++ +Y T++ G+   +Q  +++ L + M+E G+ P
Sbjct: 386 KGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 195/394 (49%), Gaps = 4/394 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +I+    P+++ ++ +++ + + K +  ++SL   +E  G+  D   +N +IN       
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
              A+ +  KM   G +P   T ++LI G+    +  +++ L+  M ++   +P+   YN
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM-EEMGFRPDVVIYN 119

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++   C    + +A  +  +M   G++ DAVTYN+L       G    A +++ +M   
Sbjct: 120 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 179

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            + PN  T   ++  + KEG   +AM+    M    V P++  +NSLI G       D  
Sbjct: 180 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 239

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            + L LM   G  PDVVT++T+++ +  +  + +  ++F +M + G+  D   ++ + +G
Sbjct: 240 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 299

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y +AG P  A+ I + M      PN+  ++ ++ G C   ++++A+ ++E M +  I  +
Sbjct: 300 YFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 356

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           + TY  ++ G  +      A +L + +  KG++P
Sbjct: 357 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 390



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 149/301 (49%), Gaps = 4/301 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G  ++A  +F+ +  +G R   +TY +LVA L    R+     L+  +    + P+ I F
Sbjct: 129 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF 188

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            A+I+   + G   EAMK++++M      P   TYN+LI G    G+ +E+ ++L LM  
Sbjct: 189 TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT 248

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K   P+  TYN L+  +C    ++E   +  +M   G+  D +TYNT+ + Y Q G   
Sbjct: 249 -KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 307

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A+++   M +   RPN RT  I++ G C    +E A+     M++ E+  ++  +N +I
Sbjct: 308 AAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 364

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G   I + +        +   G+KPDVV+++T++  +       K   ++  M + G+ 
Sbjct: 365 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 424

Query: 308 P 308
           P
Sbjct: 425 P 425



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 39/273 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++ V +GK  EA  ++  +      P + TY +L+  L    R      ++  +   G 
Sbjct: 192 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 251

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + +N +IN   +S  VDE  K+F++M   G    T TYNT+I+GY   G+P+ + +
Sbjct: 252 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE 311

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M      +PN RTY+IL+   C    +E+A  +   M  S I+ D  TYN      
Sbjct: 312 IFSRMDS----RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN------ 361

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                                        I++ G CK GN+EDA      +    + P++
Sbjct: 362 -----------------------------IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDV 392

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
           V + ++I GF   +  D  D     M+E G+ P
Sbjct: 393 VSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/308 (21%), Positives = 144/308 (46%), Gaps = 36/308 (11%)

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
           ++ + M   GI  D  +YN +     +      A  ++ +M      P+  T   +++G+
Sbjct: 31  SLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGF 90

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG------------FLDIKDSDGV---- 259
           C+   + DA+  + +M+E+   P++V++N++I G              D  + DGV    
Sbjct: 91  CQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADA 150

Query: 260 ----------------DKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
                             A  LM +  ++   P+V+TF+ ++D +   G   +  +++++
Sbjct: 151 VTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEE 210

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M +  ++PD+  ++ L  G    G   +A+ +L  M   G  P+VV + T+I+G+C + +
Sbjct: 211 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 270

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK-GVRPKKSTIQ 419
           +     ++ +M + G+  +  TY T++ GY +A +P  A+E+   M+ +  +R     + 
Sbjct: 271 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLY 330

Query: 420 LVADSWRA 427
            +  +WR 
Sbjct: 331 GLCMNWRV 338



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 64/144 (44%)

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+++   P I  FS +     ++       S+   M   G+  ++  +  VI+  C   +
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
              A+S+  KM + G  P++ T  +L+ G+ +  + + A +L+  MEE G RP       
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 421 VADSWRAIGLAREAKRVLKSAEED 444
           + D    IGL  +A  +    E D
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERD 144


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 204/401 (50%), Gaps = 9/401 (2%)

Query: 11  HEAHYIFNCLIEEGHR--PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           HEA  +   +I  G R  P ++TY+TL++   +  + +    L+ +V   G++PD++++ 
Sbjct: 62  HEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYT 121

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            ++ +  +S  + EA+++ ++M  +GC PT  T+NTLI G       E +  LLQ M+  
Sbjct: 122 KVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA- 180

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
             VK +  TYN L+   C    ++EA  ++ +M ASG  PD V Y++      + G+   
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHPNLVVFNSLI 247
           A Q+L +M+++   PN  T   I+ G CK G ++ A+  + +M   +    N+V +++++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G   +  +      +  M   G +PDVVT+S++++    AG + +  E   +M   G +
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSM-----RKYGVHPNVVMFTTVISGWCNAVKMQ 362
           P+   +  L  G    G   +AE ++  M       +   P+V  +  +I G C A ++ 
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRID 420

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
            A+  +++M   G +P+  +Y T++ G   + +  +AE +L
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMIL 461



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 217/443 (48%), Gaps = 15/443 (3%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK--PDS 64
           +G+P +   +   +     +P +++Y  L+  L + +R+     L+  +   G +  PD 
Sbjct: 23  QGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDM 82

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           + ++ +++   ++G V+E+ ++ +++   G +P    Y  ++       +  E+L+LL+ 
Sbjct: 83  VTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEE 142

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M +     P   T+N L+   C + ++E A +++ KM ASG++ D VTYNTL     + G
Sbjct: 143 MIR-AGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAG 201

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
               AEQ+L  M+ +   P+       V G CK G + DA + L +M++    PN+V +N
Sbjct: 202 RLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYN 261

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEF----GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +++ G      S  +D AL +ME+     G   +VV +ST++D     G   + + + + 
Sbjct: 262 TILDGLC---KSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEA 318

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M +AG  PD+  +S L  G  +AG+ ++A   +  M   G  PN V + +++ G C+  +
Sbjct: 319 MARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGR 378

Query: 361 MQRAMSIYEKMCEIGIN-----PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           +  A  + E+M   G       P++ TY  L+ G  +A +   A +  Q M  +G  P  
Sbjct: 379 LAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDG 438

Query: 416 STIQLVADSWRAIGLAREAKRVL 438
            +   + +     G A +A+ +L
Sbjct: 439 VSYSTIVEGLARSGRALQAEMIL 461



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 175/348 (50%), Gaps = 4/348 (1%)

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M  +GC P + T+N L+ G+   G+P +  +LL+ M+  ++++PN  +YN L+   C   
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAA-RDIQPNVVSYNGLLEGLCKLE 59

Query: 150 SIEEAWNVVYKMVASGIQ--PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
              EA  +V  M++ G +  PD VTY+TL   Y + G+   + ++L E+ +  +RP+   
Sbjct: 60  RWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALM 119

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
              +V+  CK   + +A+  L  M      P L+ FN+LI G    K+ +  D  L  M 
Sbjct: 120 YTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMA 179

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
             GVK DVVT++T+MD    AG + + +++ + M  +G  PD+  +S    G  ++G+  
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVL 239

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI-GINPNLKTYETL 386
            A  +L  MR     PNVV + T++ G C + K+  A+ + E+M    G   N+  Y T+
Sbjct: 240 DAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTV 299

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           + G  +  +   A  +++ M   G RP   T   + +     G   EA
Sbjct: 300 VDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEA 347



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 192/386 (49%), Gaps = 4/386 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P  +T+  LV   ++Q R      L+  +    ++P+ + +N ++    +     EA
Sbjct: 5   GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEA 64

Query: 84  MKIFQKMKDSGCK--PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
            ++ + M   G +  P   TY+TL+ GY   GK EES +LL+ +   + ++P+   Y  +
Sbjct: 65  EELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVIS-RGLRPDALMYTKV 123

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           V + C    + EA  ++ +M+ +G  P  +T+NTL     +      A+ +L +M  + V
Sbjct: 124 VASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGV 183

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           + +  T   ++ G CK G +++A + L RMK     P++V ++S + G           +
Sbjct: 184 KADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQ 243

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA-GIEPDIHVFSILAKGY 320
            L  M +    P+VVT++TI+D    +G +    E+ + M  + G   ++  +S +  G 
Sbjct: 244 VLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGL 303

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            + G  Q+A S++ +M + G  P+VV ++++++G C A K++ A+    +M   G  PN 
Sbjct: 304 CKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNA 363

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVM 406
            TY +L+ G     +   AE +++ M
Sbjct: 364 VTYCSLVHGLCSCGRLAEAERMVEEM 389



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 162/327 (49%), Gaps = 13/327 (3%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +I  G  PTLIT+ TL++   R+K  +   SL+ K+   G+K D + +N +++   ++G 
Sbjct: 143 MIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGR 202

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           + EA ++ ++MK SGC P    Y++ + G    GK  ++ ++L+ M +D +  PN  TYN
Sbjct: 203 LQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQM-RDSHHDPNVVTYN 261

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVAS-GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
            ++   C    I+ A  ++ +M +S G   + V Y+T+     + G T  A  ++  M  
Sbjct: 262 TILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMAR 321

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
              RP+  T   +V+G CK G +E+A+  +  M      PN V + SL+ G         
Sbjct: 322 AGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGR--- 378

Query: 259 VDKALTLMEEFG--------VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
           + +A  ++EE            P V T++ ++     AG +    + F  M   G +PD 
Sbjct: 379 LAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDG 438

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMR 337
             +S + +G  R+G   +AE IL+ +R
Sbjct: 439 VSYSTIVEGLARSGRALQAEMILSEVR 465



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 107/234 (45%), Gaps = 40/234 (17%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSIL-------------- 49
           L   GK  +AH +   + +  H P ++TY T++  L +  +  + L              
Sbjct: 232 LCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGL 291

Query: 50  ----------------------SLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIF 87
                                 S++  + + G +PD + +++++N   ++G ++EA++  
Sbjct: 292 NVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAV 351

Query: 88  QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM----SQDKNVKPNDRTYNILVR 143
           ++M   GCKP   TY +L+ G  + G+  E+ ++++ M        +  P+  TYN L+ 
Sbjct: 352 REMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIG 411

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
             C    I++A     +M + G  PD V+Y+T+    A+ G   +AE +L E++
Sbjct: 412 GLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465


>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
 gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
          Length = 690

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 189/402 (47%), Gaps = 7/402 (1%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM--KPDSILFNAMINACSESGNVDEA 83
           RP ++TY  LV  L +  R    L ++  + +  +  +PD +  N +++   +SG V EA
Sbjct: 169 RPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEA 228

Query: 84  MKIFQKMKDS--GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +   ++   S  GC P T TYN LI  +  VG    + +L++ M +++ V  N  T N +
Sbjct: 229 LAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKM-ENEGVPQNIVTLNTI 287

Query: 142 VRAWCSKNSIEEAWNVVY--KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           V   C       A       + V    + +AVTY+TL  A         A ++  E  + 
Sbjct: 288 VGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSE 347

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+      ++SG  + G +EDA      MKE     +   +N LI GF   K     
Sbjct: 348 GHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEA 407

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            + L  M+E G++PDV T++T++     AG      E+   M+  G +P +  F  L  G
Sbjct: 408 YELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHG 467

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y + G+  +A  IL SM + G+HPN V++ T+I   C    +  A+ ++++M E  +  N
Sbjct: 468 YCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPAN 527

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           + T+  LL G  +   P +A EL+  M E+   P   T+ ++
Sbjct: 528 VTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVL 569



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 183/387 (47%), Gaps = 41/387 (10%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGC---KPTTSTYNTLIKGYGNVGKPEESL 119
           D   FN+++ A +   +V    +I+  M+  GC   +P   TY  L+ G    G+  ++L
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQ--GCASVRPDVVTYGILVNGLCKAGRVGDAL 192

Query: 120 KLLQLMS-QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS--GIQPDAVTYNTL 176
           ++L  MS QD +++P+  T N +V   C    ++EA   V + ++S  G  P+ VTYN L
Sbjct: 193 RVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCL 252

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
             A+ + G    A +++ +M+N  V  N  T   IV G C+ G    A+ F +R K    
Sbjct: 253 IDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEF-FREKR--- 308

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
                                      T+  E   K + VT+ST++ A      +G   E
Sbjct: 309 ---------------------------TVWPEG--KGNAVTYSTLVGALLHTNNVGMAME 339

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F + +  G  PD  ++  +  G  +AG  + A S+ +SM++ G   +   +  +I+G+C
Sbjct: 340 LFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFC 399

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
              ++  A  + ++M E+GI P++ TY TLL G  +A      +ELL  M + G +P   
Sbjct: 400 RKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVI 459

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEE 443
           T   +   +  +G   EA R+L+S +E
Sbjct: 460 TFGTLVHGYCKVGKIDEALRILRSMDE 486



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 148/331 (44%), Gaps = 38/331 (11%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM---------------------- 60
            G  P  +TY  L+ A  R         L+ K+E +G+                      
Sbjct: 240 HGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGA 299

Query: 61  ---------------KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTL 105
                          K +++ ++ ++ A   + NV  AM++F +    G  P    Y T+
Sbjct: 300 ALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTM 359

Query: 106 IKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
           I G    G+ E++  +   M ++   K + + YNIL+  +C K  + EA+ ++ +M   G
Sbjct: 360 ISGLTQAGRLEDACSMASSM-KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           I+PD  TYNTL     + G+    +++L +M ++  +P+  T G +V GYCK G +++A+
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           R L  M E  +HPN V++N+LI       D D   +    M+E  V  +V TF+ ++   
Sbjct: 479 RILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
               +  K  E+ D M +    PD     +L
Sbjct: 539 RDKNMPEKAFELMDQMREERCFPDYVTVDVL 569



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 116/236 (49%), Gaps = 1/236 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F+  + EGH P  I Y T+++ LT+  R +   S+ S +++ G K D+  +N +I 
Sbjct: 337 AMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIA 396

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
                  + EA ++ Q+MK+ G +P   TYNTL+ G    G      +LL  M  D   +
Sbjct: 397 GFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDD-GCQ 455

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+  T+  LV  +C    I+EA  ++  M  SGI P+ V YNTL     + G+   A ++
Sbjct: 456 PSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIEL 515

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
             EM+   V  N  T   ++ G   +   E A   + +M+E    P+ V  + L++
Sbjct: 516 FDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLME 571



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 107/209 (51%), Gaps = 1/209 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  +A  + + + E G +     Y  L+A   R+KR      L+ ++++ G++PD
Sbjct: 363 LTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPD 422

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +N +++   ++G+     ++  KM D GC+P+  T+ TL+ GY  VGK +E+L++L+
Sbjct: 423 VCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILR 482

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +   + PN+  YN L+   C +  ++ A  +  +M    +  +  T+N L +     
Sbjct: 483 SMDE-SGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDK 541

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIV 212
               +A +++ +M+  +  P+  T  +++
Sbjct: 542 NMPEKAFELMDQMREERCFPDYVTVDVLM 570


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 213/421 (50%), Gaps = 14/421 (3%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E G  P++  Y  ++ AL  Q  FK I +L + ++ +G++P+   +N ++ A  ++G VD
Sbjct: 137 EFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVD 196

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
            A K+  +M + GC P   +Y T+I     +G  +++ +L          +P    YN L
Sbjct: 197 GACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAM------KFEPVVPVYNAL 250

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +   C +   +EA++++ +MV  G+ P+ ++Y+T+    +  G    +  +   M     
Sbjct: 251 IHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGC 310

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG-VD 260
           RPN +T   ++ G+   G + DA+     M    V PN+V +N+LI G      SDG +D
Sbjct: 311 RPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLC----SDGNMD 366

Query: 261 KALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
           +A+++   ME+  ++P+V T+STI+  ++ +G +    E ++ M+  G  P++ V++ + 
Sbjct: 367 EAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMV 426

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
               +     +A  ++ +M   G  P V+ F   I G C A +++ AM++ ++M +    
Sbjct: 427 DVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECL 486

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           PN++TY  LL G   A     A  L++ +EE+ V     T   +   +   G+ ++  ++
Sbjct: 487 PNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQL 546

Query: 438 L 438
           L
Sbjct: 547 L 547



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 111/446 (24%), Positives = 203/446 (45%), Gaps = 22/446 (4%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG-MK 61
           +L     P +A+ +  C + E H         +V  L ++    S L     +   G  K
Sbjct: 21  VLATNPNPEKANSLNVCPVSESH---------VVKVLRQEHDIVSSLEYFKSLSNSGTFK 71

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
              + +  MI+    +  +D    + Q+MK      +   +  +IK Y      E+ LK+
Sbjct: 72  HTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKM 131

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
              + ++   +P+ + YN+++ A  S+N  +    +   M + G++P+  TYN L +A  
Sbjct: 132 FYRI-REFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALC 190

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           Q G+   A ++L EM N    P++ +   ++S  CK G+++ A     R   ++  P + 
Sbjct: 191 QNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKA-----RELAMKFEPVVP 245

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           V+N+LI G   +       +A  LM E    GV P+V+++ST++   S  G +     +F
Sbjct: 246 VYNALIHG---VCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVF 302

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
             M   G  P++  F+ L KG+   G    A  +   M + GV PNVV + T+I G C+ 
Sbjct: 303 GRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSD 362

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
             M  A+S++ +M +  I PN+ TY T+++G+ ++     A E    M   G RP     
Sbjct: 363 GNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVY 422

Query: 419 QLVADSWRAIGLAREAKRVLKSAEED 444
             + D    + +  +A  ++ +   D
Sbjct: 423 TCMVDVLCQMSMFDQAFDLIDNMISD 448



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 105/456 (23%), Positives = 200/456 (43%), Gaps = 43/456 (9%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           + T +TY T++  L R      +  L+ +++ + +     LF  +I     S   ++ +K
Sbjct: 71  KHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLK 130

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD---KNVKPNDRTYNILV 142
           +F ++++ GC+P+   YN ++         +   K++  +  +   + ++PN  TYN+L+
Sbjct: 131 MFYRIREFGCEPSVKIYNLVLDAL----LSQNLFKMINALYNNMKSEGLEPNVFTYNVLL 186

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ----------- 191
           +A C    ++ A  ++ +M   G  PD V+Y T+  +  + G+  +A +           
Sbjct: 187 KALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVPV 246

Query: 192 -------------------MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMK 232
                              ++ EM +  V PN  +   ++S     GN+E ++    RM 
Sbjct: 247 YNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMF 306

Query: 233 ELEVHPNLVVFNSLIKGFL---DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
                PN+  F SLIKGF     + D+ G+     LM   GV P+VV ++T++    S G
Sbjct: 307 VRGCRPNVQTFTSLIKGFFVRGRVGDAVGL---WNLMIREGVSPNVVAYNTLIHGLCSDG 363

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
            M +   +++ M K  I P++  +S +  G+ ++G+   A      M   G  PNVV++T
Sbjct: 364 NMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYT 423

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
            ++   C      +A  + + M   G  P + T+   + G   A +   A  +L  ME+ 
Sbjct: 424 CMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKY 483

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
              P   T   + D        REA  +++  EE +
Sbjct: 484 ECLPNIRTYNELLDGLFRANAFREACGLIRELEERK 519



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 187/383 (48%), Gaps = 8/383 (2%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  + N +++ G  P +I+Y+T+++ L+     +  L++  ++   G +P+   F ++I
Sbjct: 262 EAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLI 321

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                 G V +A+ ++  M   G  P    YNTLI G  + G  +E++ +   M +D ++
Sbjct: 322 KGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKD-SI 380

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +PN  TY+ ++  +     +  A     KM+  G +P+ V Y  +     Q     +A  
Sbjct: 381 RPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFD 440

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           ++  M ++   P   T    + G C+ G +E AM  L +M++ E  PN+  +N L+ G  
Sbjct: 441 LIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLF 500

Query: 252 D---IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
                +++ G+ + L   EE  V+ D VT++TIM  +S  G+  +  ++   M+  GI+ 
Sbjct: 501 RANAFREACGLIREL---EERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKL 557

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMR-KYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           D    +     Y + G+ + A  +L ++  +     +++  T ++ G CN +  + A+  
Sbjct: 558 DTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVY 617

Query: 368 YEKMCEIGINPNLKTYETLLWGY 390
             +M + GI PN+ T+  L+ G+
Sbjct: 618 LHEMLKRGIFPNIATWNVLVRGF 640



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 151/304 (49%), Gaps = 10/304 (3%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA  ++N + ++  RP + TY+T++    +     S     +K+   G +P+
Sbjct: 359 LCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPN 418

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++  M++   +    D+A  +   M   GC PT  T+N  IKG    G+ E ++ +L 
Sbjct: 419 VVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLD 478

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + + + PN RTYN L+      N+  EA  ++ ++    ++ D VTYNT+   ++  
Sbjct: 479 QMEKYECL-PNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFN 537

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMK-ELEVHPNLVV 242
           G   +  Q+L +M  N ++ +  T    V+ YCK G ++ A++ L  +  E E   +++ 
Sbjct: 538 GMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIIT 597

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDA-WSSAGLMGKCQEIF 298
              ++ G   I +  G ++A+  + E    G+ P++ T++ ++   +S  G MG  + I 
Sbjct: 598 HTIILWG---ICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFSKLGHMGPIR-IL 653

Query: 299 DDMV 302
           DD++
Sbjct: 654 DDII 657


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 203/415 (48%), Gaps = 19/415 (4%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   TY  L+    +  +    +S+ S ++  G+ P++   N ++    E G +  A+K+
Sbjct: 23  PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 82

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F++M+     PT++++N L++G+   G+  E  K ++       V+P+  +Y+IL+ A  
Sbjct: 83  FREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMK----ASGVEPDLESYHILLSALS 138

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               + EA  +   M  S   PD +TYN L   Y + G+TY A+ ++ E+      PN  
Sbjct: 139 DSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVF 195

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T  II++ YCK   +E+A     +M E    PN V FN+LI GF      +   K    M
Sbjct: 196 TYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEM 255

Query: 267 EEFGVKPDVVTFSTIMDAWSSA-GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV-RAG 324
           E+ G K  +VT++T++D+     G +    ++F+ +  AG+ P I  ++ L +G+  RA 
Sbjct: 256 EKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERAN 315

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           +  +   +L  M   G  P+V+ +  +ISG C+A +++ A  ++  M      PN+ T+ 
Sbjct: 316 DGLR---LLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFN 369

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            L+ G    K+   A  +L  M      P  +T   +  ++   G   +A+ V+K
Sbjct: 370 FLIRGLCAQKKVEEARNILDRM----TAPDMTTFNTIILAFCKAGAMHDAREVMK 420



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 186/366 (50%), Gaps = 19/366 (5%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT  ++  L+       R    +    +++  G++PD   ++ +++A S+SG + EA  +
Sbjct: 93  PTSASHNILLRGFFMAGR---AIEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHAL 149

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F  M    C P   TYN L+ GY  +G+  E+  L++ + +    +PN  TY+I++  +C
Sbjct: 150 FSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILK-AGYEPNVFTYSIIINCYC 205

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
             + +EEAW V  KM+ S   P+AVT+NTL   + + G    A ++  EM+    +    
Sbjct: 206 KLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIV 265

Query: 207 TCGIIVSGYCKE-GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
           T   ++   CK+ G +  A+    +++   + P +V +NSLI+GF + + +DG+ + L  
Sbjct: 266 TYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSE-RANDGL-RLLCH 323

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M   G KPDV+T++ ++    SA  +   Q +F+ M  A   P++  F+ L +G     +
Sbjct: 324 MHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMACA---PNVTTFNFLIRGLCAQKK 380

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            ++A +IL  M      P++  F T+I  +C A  M  A  + + M + G  PN  TY T
Sbjct: 381 VEEARNILDRMTA----PDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPN--TYTT 434

Query: 386 LLWGYG 391
               +G
Sbjct: 435 YALAHG 440



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 160/320 (50%), Gaps = 14/320 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  EAH +F+ +      P ++TY  L+    +  +     SL+ ++ K G 
Sbjct: 134 LSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGY 190

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+   ++ +IN   +   V+EA ++F KM +S C P   T+NTLI G+   G  E+++K
Sbjct: 191 EPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIK 250

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSK-NSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           L   M +    K    TYN L+ + C K   +  A ++  K+  +G+ P  VTYN+L + 
Sbjct: 251 LFAEM-EKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQG 309

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           +++        ++L  M     +P+  T   ++SG C    +EDA R    M      PN
Sbjct: 310 FSERAND--GLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMA---CAPN 364

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +  FN LI+G    K    V++A  +++     PD+ TF+TI+ A+  AG M   +E+  
Sbjct: 365 VTTFNFLIRGLCAQKK---VEEARNILDRM-TAPDMTTFNTIILAFCKAGAMHDAREVMK 420

Query: 300 DMVKAGIEPDIHVFSILAKG 319
           DM+K G  P+ +    LA G
Sbjct: 421 DMLKHGFYPNTYTTYALAHG 440


>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Cucumis sativus]
          Length = 637

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 205/410 (50%), Gaps = 3/410 (0%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGH-RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK 61
           +L+ +G   + H ++N +  EG+  P  ITY+ L++A  + +R+     L  +++++G+ 
Sbjct: 203 MLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLH 262

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P   ++  ++    +   V+ A+++ ++MK  GC PT  TY  LIKG G VG+ +++  L
Sbjct: 263 PTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSL 322

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
              M +D   KP+    N L+        +E+A  +  KM +    P+ VTYNT+ +A  
Sbjct: 323 FFNMLKD-GCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIF 381

Query: 182 QYGETYRAEQMLFE-MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           +         + FE M+ N + P+  T  I++ G+CK   +E A+  L  M E    P  
Sbjct: 382 ESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCP 441

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             + SLI      K  +  ++    ++E   +     ++ ++  + + G +    ++F +
Sbjct: 442 AAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCE 501

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M K G  PD++ ++ L  G +RAG   +A S++ +MR+ G  P++     +++G      
Sbjct: 502 MKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGG 561

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
            +RA+ ++ KM E  I P+  +Y T+L     A     A +L++ M+ KG
Sbjct: 562 PKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKG 611



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/418 (24%), Positives = 196/418 (46%), Gaps = 9/418 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDG-MKPDSILFNAMINACSESGNVDEAMK 85
           PT   Y TL+  L  +   + I  L +++  +G   PD+I ++A+I+A  +    D A +
Sbjct: 192 PTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFR 251

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +F +MK++G  PT   Y T++  Y  + K E +L+L++ M + K   P   TY  L++  
Sbjct: 252 LFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEM-KGKGCAPTVFTYTELIKGL 310

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                +++A+++ + M+  G +PD V  N L     + G    A ++  +M + Q  PN 
Sbjct: 311 GKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNV 370

Query: 206 RTCGIIVSG-YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
            T   ++   +  +    +A  +  +MK   + P+   +  LI GF     ++ V+KAL 
Sbjct: 371 VTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCK---TNRVEKALL 427

Query: 265 LMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           L+EE    G  P    + +++D+   A       E+F ++ +        V++++ K + 
Sbjct: 428 LLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFG 487

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
             G    A  +   M+K G  P+V  +  ++SG   A  +  A S+   M E G  P++K
Sbjct: 488 NCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIK 547

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           ++  +L G  +   P RA E+   M+E  + P   +   +       G+   A ++++
Sbjct: 548 SHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMR 605



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 159/339 (46%), Gaps = 4/339 (1%)

Query: 20  LIEE----GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           L+EE    G  PT+ TYT L+  L +  R     SL   + KDG KPD +L N +IN   
Sbjct: 287 LVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILG 346

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
            +G +++A+K+F KM    C P   TYNT+IK       P     L     +   + P+ 
Sbjct: 347 RAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSS 406

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY IL+  +C  N +E+A  ++ +M   G  P    Y +L  +  +      A ++  E
Sbjct: 407 FTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQE 466

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           ++ N  R + R   +++  +   G + DA+     MK+L   P++  +N+L+ G +    
Sbjct: 467 LKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGM 526

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D     +  M E G  PD+ + + I++  +  G   +  E+F  M ++ I PD   ++ 
Sbjct: 527 IDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNT 586

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
           +     RAG  + A  ++  M+  G   + + +++++  
Sbjct: 587 ILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEA 625



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/422 (20%), Positives = 193/422 (45%), Gaps = 6/422 (1%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           ++ ++  L + K     LS+  +++     P + ++N +I      G+ ++  +++ ++ 
Sbjct: 162 WSEILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEIC 221

Query: 92  DSG-CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
             G C P T TY+ LI  +G + + + + +L   M ++  + P ++ Y  ++  +   N 
Sbjct: 222 SEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKEN-GLHPTEKIYTTILAMYFKLNK 280

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           +E A  +V +M   G  P   TY  L +   + G    A  + F M  +  +P+      
Sbjct: 281 VEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINN 340

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL--MEE 268
           +++   + G +EDA++   +M  L+  PN+V +N++IK   + K +   + AL    M+ 
Sbjct: 341 LINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESK-APASEAALWFEKMKA 399

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G+ P   T++ ++D +     + K   + ++M + G  P    +  L     RA   + 
Sbjct: 400 NGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEA 459

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  +   +++     +  ++  +I  + N  ++  A+ ++ +M ++G +P++ TY  L+ 
Sbjct: 460 ANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMS 519

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSM 448
           G   A     A  L++ M E G  P   +  ++ +     G  + A  +    +E  + M
Sbjct: 520 GMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKES-EIM 578

Query: 449 PN 450
           P+
Sbjct: 579 PD 580



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 157/348 (45%), Gaps = 3/348 (0%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           DS  + A+I    ESG VDE  +  Q M  S C    + ++ ++K  G      ++L + 
Sbjct: 123 DSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVF 182

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG-IQPDAVTYNTLARAYA 181
             + + +   P    YN L+     +   E+   +  ++ + G   PD +TY+ L  A+ 
Sbjct: 183 YQI-KGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFG 241

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           +      A ++  EM+ N + P E+    I++ Y K   +E A+R +  MK     P + 
Sbjct: 242 KLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVF 301

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            +  LIKG   +   D        M + G KPDVV  + +++    AG +    ++F  M
Sbjct: 302 TYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM 361

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESI-LTSMRKYGVHPNVVMFTTVISGWCNAVK 360
                 P++  ++ + K    +  P    ++    M+  G+ P+   +  +I G+C   +
Sbjct: 362 DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNR 421

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           +++A+ + E+M E G  P    Y +L+   G AK+   A EL Q ++E
Sbjct: 422 VEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKE 469



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 145/288 (50%), Gaps = 8/288 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSL-ISKVEKDG 59
           +NIL   G+  +A  +F  +      P ++TY T++ A+   K   S  +L   K++ +G
Sbjct: 342 INILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANG 401

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + P S  +  +I+   ++  V++A+ + ++M + G  P  + Y +LI   G   + E + 
Sbjct: 402 IAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAAN 461

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +L Q + ++   + + R Y ++++ + +   + +A ++  +M   G  PD  TYN L   
Sbjct: 462 ELFQELKENCG-RSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSG 520

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G    A  ++  M+ N   P+ ++  II++G  K G  + A+    +MKE E+ P+
Sbjct: 521 MIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPD 580

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDA 284
            V +N+++     +  +   + A  LM E    G + D +T+S+I++A
Sbjct: 581 AVSYNTILSC---LSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEA 625



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/112 (22%), Positives = 61/112 (54%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ ++  G   EAH +   + E G  P + ++  ++  L +    K  + + +K+++  +
Sbjct: 518 MSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEI 577

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNV 112
            PD++ +N +++  S +G  + A K+ ++MK  G +  + TY+++++  G V
Sbjct: 578 MPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAVGKV 629


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 193/397 (48%), Gaps = 8/397 (2%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G  P + T+ TL+A L R   F+ +   +S++ + G  PD  ++  +I+   + G+
Sbjct: 239 MVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGH 298

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
            + A  I  +M   G KP    YNT++KG  +  + EE+  LL  M Q+ +   +D T+N
Sbjct: 299 HEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQE-DCPLDDVTFN 357

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           ILV  +C    ++    ++ +M+  G  PD +TY T+   + + G    A  +L  M   
Sbjct: 358 ILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSAC 417

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
             +PN  +  I++ G C+     DA   +  M +    PN V FN+LI  F+  K    V
Sbjct: 418 GCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLIN-FMCKKGL--V 474

Query: 260 DKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           ++A+ L+++    G  PD++++ST++D    AG   +  E+ + M+  GI P+  ++S +
Sbjct: 475 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSM 534

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
           A    R G   K   +  S++   V  +  ++  VIS  C   +  RA+  +  M   G 
Sbjct: 535 ASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGC 594

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELL-QVMEEKGVR 412
            PN  TY  L+ G         A++LL ++   + VR
Sbjct: 595 MPNESTYTILIRGLASEGLVREAQDLLSELCSRRAVR 631



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 203/432 (46%), Gaps = 6/432 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G   +A  + + +   G   T      ++ A  R   F+S +  +  +   G   D
Sbjct: 118 LCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLD 177

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           S   N +++A  E G VDE +++ +K+   GC+P   +YN ++KG     + ++  +L+ 
Sbjct: 178 SGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMV 237

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +     PN  T+N L+   C     E+    + +M   G  PD   Y T+     + 
Sbjct: 238 EMVR-VGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKD 296

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A  +L  M +  ++PN      ++ G C     E+A   L  M + +   + V F
Sbjct: 297 GHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTF 356

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N L+  F      D V + L  M E G  PDV+T++T+++ +   GL+ +   +  +M  
Sbjct: 357 NILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSA 416

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G +P+   ++I+ KG  RA     A+ +++ M + G  PN V F T+I+  C    +++
Sbjct: 417 CGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQ 476

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+ + ++M   G +P+L +Y T++ G G+A +   A ELL VM  KG+ P       +  
Sbjct: 477 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNT-----IIY 531

Query: 424 SWRAIGLAREAK 435
           S  A  L+RE +
Sbjct: 532 SSMASALSREGR 543



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 99/415 (23%), Positives = 198/415 (47%), Gaps = 1/415 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P +++Y  ++  L   KR+  +  L+ ++ + G  P+   FN +I     +G  ++ 
Sbjct: 208 GCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQV 267

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            +   +M + GC P    Y T+I G    G  E +  +L  M     +KPN   YN +++
Sbjct: 268 HEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPS-YGLKPNVVCYNTVLK 326

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             CS    EEA +++ +M       D VT+N L   + Q G   R  ++L +M  +   P
Sbjct: 327 GLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIP 386

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   +++G+CKEG +++A+  L  M      PN + +  ++KG    +      + +
Sbjct: 387 DVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELI 446

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           + M + G  P+ VTF+T+++     GL+ +  E+   M+  G  PD+  +S +  G  +A
Sbjct: 447 SHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 506

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+ ++A  +L  M   G+ PN ++++++ S      +  + + +++ + +  +  +   Y
Sbjct: 507 GKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALY 566

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             ++    +  +  RA +    M   G  P +ST  ++     + GL REA+ +L
Sbjct: 567 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLL 621



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/416 (22%), Positives = 192/416 (46%), Gaps = 4/416 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G    ++ Y  ++A   R  +  +   L + V    + P++  +  ++ +    G + +A
Sbjct: 71  GDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP---VPPNAYTYFPIVRSLCARGLIADA 127

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +  +M   GC  T    + +++     G    +++ LQ++   K    +    N++V 
Sbjct: 128 LTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVL-HAKGCTLDSGNCNLVVS 186

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           A C +  ++E   ++ K+ + G +PD V+YN + +           E+++ EM      P
Sbjct: 187 AICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPP 246

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  T   +++  C+ G  E     L +M E    P+L ++ ++I G       +  +  L
Sbjct: 247 NVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDIL 306

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           + M  +G+KP+VV ++T++    SA    + +++  +M +     D   F+IL   + + 
Sbjct: 307 SRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQN 366

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G   +   +L  M ++G  P+V+ +TTVI+G+C    +  A+ + + M   G  PN  +Y
Sbjct: 367 GLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISY 426

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             +L G   A++   A+EL+  M ++G  P   T   + +     GL  +A  +LK
Sbjct: 427 TIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLK 482



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/377 (21%), Positives = 154/377 (40%), Gaps = 42/377 (11%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            +A+I +   +G   +A +      D+        YN +I GY   G+    +   + ++
Sbjct: 47  LSALIRSLCAAGRTADAARALDTAGDAA---GVVAYNAMIAGYCRAGQ----VAAARRLA 99

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
               V PN  TY  +VR+ C++  I +A  V+ +M   G        + +  A  + G  
Sbjct: 100 AAVPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGF 159

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A + L  +       +   C ++VS  C++G +++ +  L ++               
Sbjct: 160 RSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPS------------- 206

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
                                 FG +PD+V+++ ++     A      +E+  +MV+ G 
Sbjct: 207 ----------------------FGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGC 244

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P++  F+ L     R G  ++    L+ M ++G  P++ M+ T+I G C     + A  
Sbjct: 245 PPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVAND 304

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           I  +M   G+ PN+  Y T+L G   A++   AE+LL  M ++       T  ++ D + 
Sbjct: 305 ILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFC 364

Query: 427 AIGLAREAKRVLKSAEE 443
             GL      +L+   E
Sbjct: 365 QNGLVDRVIELLEQMLE 381



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 67/125 (53%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA  + N +I +G  P  I Y+++ +AL+R+ R   I+ +   ++   ++ D+ L+
Sbjct: 507 GKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALY 566

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           NA+I++  +    D A+  F  M  +GC P  STY  LI+G  + G   E+  LL  +  
Sbjct: 567 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCS 626

Query: 128 DKNVK 132
            + V+
Sbjct: 627 RRAVR 631


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 225/515 (43%), Gaps = 23/515 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ LV      +AH ++  ++  G  P   T+T  + +     R    L L+  + + G 
Sbjct: 17  MDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLPERGC 76

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
               + +  ++      G+  +A  +F +M      P  +T+N ++      G   ES  
Sbjct: 77  DVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGA 136

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  + + + +  N  T NI +R  C    +EEA  +V  M A  I PD VTYNTL R  
Sbjct: 137 LLAKVLK-RGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVTYNTLMRGL 194

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +   A Q L  M N    P++ T   I+ GYCK   +++A   L         P+ 
Sbjct: 195 CKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDR 254

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V + SLI G     D   V++AL L  E     +KPD+V +++++      GL+    ++
Sbjct: 255 VTYCSLINGLCAEGD---VERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQV 311

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            ++MV+ G  PDI  ++I+  G  + G    A  ++      G  P+V  F T+I G+C 
Sbjct: 312 MNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCK 371

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            +K+  A+ + E+M   GI P+  TY ++L G  +A +     E  + M  KG RP   T
Sbjct: 372 RLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAIT 431

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNL----------- 466
             ++ +++  I    EA  V+    +D            +    R  +L           
Sbjct: 432 YNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLD 491

Query: 467 ----SASNSTFLQIPGVVSSEHNGSSAAKIRSQIV 497
               SA+  TF  + G  SS+ N   A KI  +++
Sbjct: 492 EKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMI 526



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 209/428 (48%), Gaps = 12/428 (2%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +    I +G  P  +TY +L+  L  +   +  L L ++ +   +KPD +++N+++
Sbjct: 237 EATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLV 296

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                 G +  A+++  +M + GC P   TYN +I G   +G   ++     ++  D  V
Sbjct: 297 KGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDA----AVVMNDAIV 352

Query: 132 K---PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           K   P+  T+N ++  +C +  ++ A  +V +M   GI PDA+TYN++     + G+   
Sbjct: 353 KGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKE 412

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
             +   EM     RPN  T  I++  +CK   +E+A   + RM +  + P+ + FN+LI 
Sbjct: 413 VNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIH 472

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           GF    D DG       ++E G      TF+ ++ A+SS   M   ++IF +M+  G +P
Sbjct: 473 GFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKP 532

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D++ + +L  G  +A    +A   L  M   G  P++  F  V++      ++  A++I 
Sbjct: 533 DLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAII 592

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
             M  +G+ P  +  +T+L    + K+    + L++ + +KG      T +++ +  R  
Sbjct: 593 HIMVRMGVVP--EVVDTIL--STDKKEIAAPKILVEELMKKG-HISYPTYEVLHEGVRDN 647

Query: 429 GLAREAKR 436
            L R+A++
Sbjct: 648 KLTRKARK 655



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 181/398 (45%), Gaps = 1/398 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P ++TY TL+  L +  + +     + ++   G  PD   +N +I+   +   + EA ++
Sbjct: 182 PDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATEL 241

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            +     G  P   TY +LI G    G  E +L+L    +Q K++KP+   YN LV+  C
Sbjct: 242 LKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFN-EAQAKDLKPDLVVYNSLVKGLC 300

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            +  I  A  V+ +MV  G  PD  TYN +     + G    A  ++ +       P+  
Sbjct: 301 RQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVF 360

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   ++ GYCK   ++ A++ + RM    + P+ + +NS++ G      +  V++    M
Sbjct: 361 TFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEM 420

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              G +P+ +T++ +++ +     + +   +   M + G+ PD   F+ L  G+ R G+ 
Sbjct: 421 ILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDL 480

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             A  +   + + G       F  +I  + + + MQ A  I+ +M   G  P+L TY  L
Sbjct: 481 DGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVL 540

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           + G  +A    RA   L  M  KG  P  +T   V +S
Sbjct: 541 VDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNS 578



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/414 (23%), Positives = 180/414 (43%), Gaps = 1/414 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L    K  EA      ++ +G  P   TY T++    ++   +    L+      G 
Sbjct: 191 MRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGF 250

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + + ++IN     G+V+ A+++F + +    KP    YN+L+KG    G    +L+
Sbjct: 251 VPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQ 310

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           ++  M +D    P+  TYNI++   C   +I +A  V+   +  G  PD  T+NT+   Y
Sbjct: 311 VMNEMVED-GCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGY 369

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +   A Q++  M    + P+  T   +++G CK G  ++       M      PN 
Sbjct: 370 CKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNA 429

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +N LI+ F  I   +     +  M + G+ PD ++F+T++  +   G +     +F  
Sbjct: 430 ITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQK 489

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           + + G       F+IL   Y      Q AE I   M   G  P++  +  ++ G C A  
Sbjct: 490 LDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAAN 549

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
           + RA     +M   G  P++ T+  +L       +   A  ++ +M   GV P+
Sbjct: 550 VDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPE 603



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/245 (20%), Positives = 86/245 (35%), Gaps = 69/245 (28%)

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M+ FG  P    ++ IMDA  +     +  +++  M+ AG+ PD    ++  K +   G 
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 326 PQKAESILTSMRKYG-----------------------------------VHPNVVMFTT 350
           P  A  +L S+ + G                                   V P+V  F  
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 351 VISGWCN-----------AVKMQRAMSIYEKMCEIGIN---------------------- 377
           V+   C            A  ++R MS+ +  C I I                       
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYI 180

Query: 378 -PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            P++ TY TL+ G  +  +   A + L+ M  +G  P   T   + D +    + +EA  
Sbjct: 181 APDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATE 240

Query: 437 VLKSA 441
           +LK A
Sbjct: 241 LLKDA 245


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/441 (24%), Positives = 214/441 (48%), Gaps = 1/441 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K ++A  +F  + E    P+++ ++ L+ A+ + K++++++SL   +E  G+  D   F+
Sbjct: 53  KFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFS 112

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I+       +  A+    KM   G +P+  T+ +L+ G+ +V + +E++ L+  +   
Sbjct: 113 TLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIV-G 171

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
              +PN   YN ++ + C    ++ A +V+  M   GI+PD +TYN+L       G+   
Sbjct: 172 LGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGV 231

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           + ++L +M    + P+  T   ++  + KEG + +A +    M +  V PN+V +NSLI 
Sbjct: 232 SARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLIN 291

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G       D   K L  M   G  P+ VT++T+++ +  +  +    +I   M   G++ 
Sbjct: 292 GLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDG 351

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D   ++ L +GY +AG+   AE +L  M   GV P++  F  ++ G C   K+++A+   
Sbjct: 352 DTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKL 411

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           E + +      + TY  ++ G  +A +   A  L   +  KGV P   T   +    R  
Sbjct: 412 EDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRK 471

Query: 429 GLAREAKRVLKSAEEDRQSMP 449
            L  EA  + +  ++D   MP
Sbjct: 472 RLWLEAHELYRKMKKDDGLMP 492



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 121/247 (48%), Gaps = 1/247 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK   +  I + ++  G  P +IT++ ++    ++ +         ++ +  + P+
Sbjct: 223 LFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPN 282

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N++IN     G +DEA K+   M   G  P   TYNTL+ GY    + ++++K+L 
Sbjct: 283 IVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILC 342

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           +MS D  V  +  TYN L + +C       A  V+ +MV+ G+ PD  T+N L     ++
Sbjct: 343 VMSHD-GVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEH 401

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+  +A   L ++Q ++      T  II+ G CK   +EDA      +    V P+++ +
Sbjct: 402 GKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITY 461

Query: 244 NSLIKGF 250
            +++ G 
Sbjct: 462 TTMMIGL 468



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 94/194 (48%), Gaps = 7/194 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G   EA  + N ++ +G  P  +TY TLV    + KR    + ++  +  DG+
Sbjct: 290 INGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGV 349

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D+  +N +     ++G  + A K+  +M   G  P   T+N L+ G    GK E++L 
Sbjct: 350 DGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALV 409

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA--- 177
            L+ + + + V     TYNI+++  C  N +E+AW +   +   G+ PD +TY T+    
Sbjct: 410 KLEDLQKSETV-VGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGL 468

Query: 178 ---RAYAQYGETYR 188
              R + +  E YR
Sbjct: 469 RRKRLWLEAHELYR 482


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 210/446 (47%), Gaps = 43/446 (9%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A ++F  +   G +    +YT L+  L   K  +  L L   +++DG  P+   F
Sbjct: 232 GELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAF 291

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+   +SG V +A  +F  M  +G  P+  TYN +I GY  +G+  ++LK+ +LM +
Sbjct: 292 TFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEK 351

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA---QYG 184
           +    P+D TYN L+   C + + EEA  ++   V  G  P  VT+  L   Y    ++ 
Sbjct: 352 N-GCHPDDWTYNTLIYGLCDQKT-EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFD 409

Query: 185 ETYR--------------------------------AEQMLFEMQNNQVRPNERTCGIIV 212
           +  R                                A+++L E+  N + PN  T   I+
Sbjct: 410 DALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSII 469

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
            GYCK G ++ A+  L  M+     PN   +NSL+ G +  K        LT M++ G+ 
Sbjct: 470 DGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGII 529

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           P+V+T++T++              +F+ M + G++PD H +++L     +AG  ++A S 
Sbjct: 530 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 589

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           +  +RK GV    V +TT+I G+  A     A ++ E+M + G  P+  TY  LL    +
Sbjct: 590 I--VRK-GVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCK 646

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTI 418
            K   R  E L ++++  +R  K TI
Sbjct: 647 QK---RLNEALPILDQMSLRGIKCTI 669



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 193/413 (46%), Gaps = 4/413 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  + N  ++EG  PT++T+T L+      ++F   L + +K+     K D  +F 
Sbjct: 372 KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFG 431

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +IN+  +   + EA ++  ++  +G  P   TY ++I GY   GK + +L++L++M +D
Sbjct: 432 KLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 491

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
              +PN  TYN L+        + +A  ++ KM   GI P+ +TY TL +      +   
Sbjct: 492 -GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDN 550

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A ++   M+ N ++P+E    ++    CK G  E+A  F+ R     V    V + +LI 
Sbjct: 551 AFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKG---VALTKVYYTTLID 607

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           GF    ++D     +  M + G  PD  T+S ++ A      + +   I D M   GI+ 
Sbjct: 608 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 667

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
            I  ++IL    +R G+   A+ +   M   G  P+   +T  I+ +C   +++ A  + 
Sbjct: 668 TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 727

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            KM   G+ P++ TY  L+ G G      RA   L+ M      P   T  L+
Sbjct: 728 LKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLL 780



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 189/402 (47%), Gaps = 20/402 (4%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV   K H+A  +   + ++G  P +ITYTTL+     +  F +   L   +E++G+KPD
Sbjct: 507 LVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPD 566

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +  + +A  ++G  +EA     +    G   T   Y TLI G+   G  + +  L++
Sbjct: 567 EHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDFAATLIE 623

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D+   P+  TY++L+ A C +  + EA  ++ +M   GI+     Y  L     + 
Sbjct: 624 RMI-DEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLRE 682

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A++M  EM ++  +P+  T  + ++ YCKEG +EDA   + +M+   V P++V +
Sbjct: 683 GKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTY 742

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL------------- 290
           N LI G   +   D     L  M     +P+  T+  ++       L             
Sbjct: 743 NILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWN 802

Query: 291 ---MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
              +    ++ + MVK G+ P +  +S L  G+ +AG  ++A  +L  M   G+ PN  +
Sbjct: 803 LIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDI 862

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           +T +I   C+    ++A+S    M E G  P L++Y  L+ G
Sbjct: 863 YTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVG 904



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 188/382 (49%), Gaps = 2/382 (0%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           Y   + +L R    + +  + S++ +DG+ PD++ +N MI +  + G++  A + F+ + 
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLL 210

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
           + G +P T T N L+ GY   G+  ++  L  LM      + N+ +Y IL++  C    +
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLF-LMMPLMGCQRNEYSYTILIQGLCEAKCV 269

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
            EA  +   M   G  P+   +  L     + G    A  +   M  N V P+  T   +
Sbjct: 270 REALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAM 329

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           + GY K G M DA++    M++   HP+   +N+LI G  D K  +  +     ++E G 
Sbjct: 330 IVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKE-GF 388

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            P VVTF+ +++ +  A        + + M+ +  + D+ VF  L    ++    ++A+ 
Sbjct: 389 TPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKE 448

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +L  +   G+ PNV+ +T++I G+C + K+  A+ + + M   G  PN  TY +L++G  
Sbjct: 449 LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 508

Query: 392 EAKQPWRAEELLQVMEEKGVRP 413
           + K+  +A  LL  M++ G+ P
Sbjct: 509 KDKKLHKAMALLTKMQKDGIIP 530



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/508 (23%), Positives = 223/508 (43%), Gaps = 61/508 (12%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L+ K +  EA  + N +   G  P +ITYT+++    +  +    L ++  +E+DG 
Sbjct: 434 INSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGC 493

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P++  +N+++    +   + +AM +  KM+  G  P   TY TL++G  +    + + +
Sbjct: 494 QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFR 553

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L ++M Q+  +KP++  Y +L  A C     EEA++ +   V  G+    V Y TL   +
Sbjct: 554 LFEMMEQN-GLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDGF 609

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++ G T  A  ++  M +    P+  T  +++   CK+  + +A+  L +M    +   +
Sbjct: 610 SKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTI 669

Query: 241 VVFNSLIKGFLDIKDSD-----------------------------------GVDKALTL 265
             +  LI   L     D                                     +  +  
Sbjct: 670 FAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILK 729

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK------- 318
           ME  GV PDVVT++ ++D     G + +       MV A  EP+   + +L K       
Sbjct: 730 MEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNL 789

Query: 319 GYVRAG---------EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
            YVR+          E      +L  M K+G++P V  ++++I+G+C A +++ A  + +
Sbjct: 790 AYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLD 849

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
            MC  G++PN   Y  L+    + K   +A   + +M E G +P+  + +L+      +G
Sbjct: 850 HMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLL-----VVG 904

Query: 430 LAREAK-RVLKSAEEDRQSMPNKKDEIA 456
           L  E     +KS   D   +    DE+A
Sbjct: 905 LCNEGDFEKVKSLFCDLLELGYNHDEVA 932



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/468 (23%), Positives = 210/468 (44%), Gaps = 34/468 (7%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  +A  +F+ + + G  P+++TY  ++   ++  R    L +   +EK+G  PD
Sbjct: 298 LCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 357

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +N +I    +    +EA ++       G  PT  T+  LI GY    K +++L++  
Sbjct: 358 DWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKN 416

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K  K + + +  L+ +   K+ ++EA  ++ ++ A+G+ P+ +TY ++   Y + 
Sbjct: 417 KMMSSK-CKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKS 475

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A ++L  M+ +  +PN  T   ++ G  K+  +  AM  L +M++  + PN++ +
Sbjct: 476 GKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITY 535

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPD----------------------------- 274
            +L++G  D  D D   +   +ME+ G+KPD                             
Sbjct: 536 TTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGV 595

Query: 275 ---VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
               V ++T++D +S AG       + + M+  G  PD + +S+L     +     +A  
Sbjct: 596 ALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALP 655

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           IL  M   G+   +  +T +I       K   A  +Y +M   G  P+  TY   +  Y 
Sbjct: 656 ILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYC 715

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           +  +   AE+L+  ME +GV P   T  ++ D    +G    A   LK
Sbjct: 716 KEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLK 763



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 159/335 (47%), Gaps = 17/335 (5%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +I+EG  P   TY+ L+ AL +QKR    L ++ ++   G+K     +  +I+     G 
Sbjct: 625 MIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGK 684

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
            D A +++ +M  SG KP+ +TY   I  Y   G+ E++  L+  M ++  V P+  TYN
Sbjct: 685 HDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMERE-GVAPDVVTYN 743

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR-------AYAQYGETYR---- 188
           IL+        I+ A++ + +MV +  +P+  TY  L +       AY +  +T      
Sbjct: 744 ILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNL 803

Query: 189 -----AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                  Q+L  M  + + P   T   +++G+CK G +E+A   L  M    + PN  ++
Sbjct: 804 IELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIY 863

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
             LIK   D K  +     +++M E G +P + ++  ++    + G   K + +F D+++
Sbjct: 864 TLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLE 923

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
            G   D   + IL  G ++AG       +L+ M K
Sbjct: 924 LGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEK 958



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 150/343 (43%), Gaps = 2/343 (0%)

Query: 102 YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
           YN  ++        E   ++   + QD  + P+  TYN +++++C +  +  A      +
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQD-GLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLL 209

Query: 162 VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM 221
           +  G++P+  T N L   Y + GE  +A  +   M     + NE +  I++ G C+   +
Sbjct: 210 LEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCV 269

Query: 222 EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
            +A+     MK     PN+  F  LI G                M + GV P V+T++ +
Sbjct: 270 REALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAM 329

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +  +S  G M    +I + M K G  PD   ++ L  G     + ++AE +L +  K G 
Sbjct: 330 IVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGF 388

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
            P VV FT +I+G+C A K   A+ +  KM       +L+ +  L+    +  +   A+E
Sbjct: 389 TPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKE 448

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           LL  +   G+ P   T   + D +   G    A  VLK  E D
Sbjct: 449 LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 491


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 201/410 (49%), Gaps = 22/410 (5%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           H+A    + L+  G     ++Y TL+  L +    ++ L L+ +V+   ++ +++++N +
Sbjct: 142 HQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTV 201

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           I    +  +V++A  ++ +M   G  P   TY+ LI G+  VGK ++++ L   +  + N
Sbjct: 202 IYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILE-N 260

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           +KP+  T+NILV  +C    ++E   V   M+  GI PD VTYN+L   Y    E   A+
Sbjct: 261 IKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAK 320

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            +   M    V P+ R+  I+++G+CK   ++ AM     M    + PN+V +NSLI G 
Sbjct: 321 SIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDG- 379

Query: 251 LDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             +  S  +  AL L   M + GV P+++T+++I+DA      + K   +       GI+
Sbjct: 380 --LSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQ 437

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P ++ ++IL  G             L  +  Y +  N   +  +I G+C       A+S+
Sbjct: 438 PSMYTYTILIDG-------------LCKVEGYDITVNT--YNVMIHGFCKKGLFDEALSL 482

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             KM +    PN  TYE  +    +  +  +AE+L + M  +G+  + ++
Sbjct: 483 LSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSAS 532



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/454 (24%), Positives = 216/454 (47%), Gaps = 22/454 (4%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +FN L+ +   P    +  ++ +L + K + ++LSL  K+E  G+KP+    N +I
Sbjct: 69  DAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILI 128

Query: 72  NACSESG----NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
               + G     + +A     K+   G      +Y TLI G   VG+   +L LLQ +  
Sbjct: 129 YCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRV-D 187

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K V+ N   YN ++   C    + +A+++  +MV+ GI P+ VTY+ L   +   G+  
Sbjct: 188 GKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLK 247

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +  ++    ++P+  T  I+V G+CK+  M++       M +  + P++V +NSL+
Sbjct: 248 DAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLM 307

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G+  +K+ +        M + GV PD+ +++ +++ +     + K   +F++M    I 
Sbjct: 308 DGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNII 367

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P++  ++ L  G  ++G    A  ++  M   GV PN++ + ++I       ++ +A+++
Sbjct: 368 PNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIAL 427

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
             K  + GI P++ TY  L+ G               + + +G     +T  ++   +  
Sbjct: 428 ITKFKDQGIQPSMYTYTILIDG---------------LCKVEGYDITVNTYNVMIHGFCK 472

Query: 428 IGLAREAKRVLKSAEEDRQSMPNKKD-EIAVESI 460
            GL  EA  +L S  +D   +PN    EI + S+
Sbjct: 473 KGLFDEALSLL-SKMKDSSCIPNAVTYEITIRSL 505



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 193/401 (48%), Gaps = 21/401 (5%)

Query: 47  SILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLI 106
           S L L++K+        S  F++       + +VD+A+ +F ++      P    +N ++
Sbjct: 41  SFLILLTKINFISYSSTSTTFHS-------NNDVDDAVSLFNRLLRQNPTPPAFEFNKIL 93

Query: 107 KGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN----SIEEAWNVVYKMV 162
                       L L Q M + + +KPN    NIL+  +C        I +A+    K+V
Sbjct: 94  GSLVKSKHYHTVLSLSQKM-EFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLV 152

Query: 163 ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNME 222
           A G   D V+Y TL     + GET  A  +L  +    V+ N      ++ G CK+ ++ 
Sbjct: 153 ALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVN 212

Query: 223 DAMRFLYRMKELEVHPNLVVFNSLIKGFLDI-KDSDGVDKALTLMEEFGVKPDVVTFSTI 281
           DA      M    + PN+V +++LI GF  + K  D +D    ++ E  +KPD  TF+ +
Sbjct: 213 DAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILE-NIKPDGYTFNIL 271

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +D +     M + + +F  M+K GI PD+  ++ L  GY    E   A+SI  +M + GV
Sbjct: 272 VDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGV 331

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
           +P++  +  +I+G+C   K+ +AM+++ +M    I PN+ TY +L+ G  ++ +   A +
Sbjct: 332 NPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQ 391

Query: 402 LLQVMEEKGVRPKKSTIQLVADSW-------RAIGLAREAK 435
           L+  M ++GV P   T   + D+        +AI L  + K
Sbjct: 392 LVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFK 432



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 161/363 (44%), Gaps = 27/363 (7%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           ++A  +++ ++ +G  P ++TY+ L++      + K  + L +K+  + +KPD   FN +
Sbjct: 212 NDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNIL 271

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           ++   +   + E   +F  M   G  P   TYN+L+ GY  V +   +  +   M+Q   
Sbjct: 272 VDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQG-G 330

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           V P+ R+YNIL+  +C    +++A N+  +M    I P+ VTYN+L    ++ G    A 
Sbjct: 331 VNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYAL 390

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           Q++ +M +  V PN  T   I+    K   ++ A+  + + K+  + P++  +  LI G 
Sbjct: 391 QLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGL 450

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
             ++               G    V T++ ++  +   GL  +   +   M  +   P+ 
Sbjct: 451 CKVE---------------GYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNA 495

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGV------HPNVVM-----FTTVISGWCNAV 359
             + I  +  +   E  KAE +   M   G+      +P   M      T V   WC++ 
Sbjct: 496 VTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSASYPCSSMKIHQSLTMVQHTWCDSC 555

Query: 360 KMQ 362
             Q
Sbjct: 556 SHQ 558



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 130/275 (47%), Gaps = 20/275 (7%)

Query: 1   MNILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
            NILV       K  E   +F  ++++G  P ++TY +L+      K   +  S+ + + 
Sbjct: 268 FNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMA 327

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           + G+ PD   +N +IN   +   VD+AM +F +M      P   TYN+LI G    G+  
Sbjct: 328 QGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRIS 387

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
            +L+L+  M  D+ V PN  TYN ++ A    + +++A  ++ K    GIQP   TY  L
Sbjct: 388 YALQLVDQM-HDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTIL 446

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
                           L +++   +  N  T  +++ G+CK+G  ++A+  L +MK+   
Sbjct: 447 IDG-------------LCKVEGYDITVN--TYNVMIHGFCKKGLFDEALSLLSKMKDSSC 491

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
            PN V +   I+  LD  ++D  +K    M   G+
Sbjct: 492 IPNAVTYEITIRSLLDNNENDKAEKLFREMITRGL 526



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 6/224 (2%)

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
           +++DA+    R+      P    FN ++   +  K    V      ME  G+KP++   +
Sbjct: 66  DVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCN 125

Query: 280 TIMDAWSSAGLMGKCQ-----EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
            ++  +   GL+  CQ        D +V  G   D   +  L  G  + GE + A  +L 
Sbjct: 126 ILIYCFCQLGLI-PCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQ 184

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            +    V  N VM+ TVI G C    +  A  +Y +M   GI+PN+ TY  L+ G+    
Sbjct: 185 RVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVG 244

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           +   A +L   +  + ++P   T  ++ D +      +E K V 
Sbjct: 245 KLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVF 288



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/316 (18%), Positives = 133/316 (42%), Gaps = 39/316 (12%)

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           K N  +Y+     + S N +++A ++  +++     P A  +N +  +  +    +    
Sbjct: 48  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLS 107

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEG----NMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +  +M+   ++PN   C I++  +C+ G     +  A  F  ++  L  H + V + +LI
Sbjct: 108 LSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLI 167

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G   + ++      L  ++   V+ + V ++T+        + G C+            
Sbjct: 168 HGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTV--------IYGMCK------------ 207

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
            D HV                A  + + M   G+ PNVV ++ +ISG+    K++ A+ +
Sbjct: 208 -DKHV--------------NDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDL 252

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           + K+    I P+  T+  L+ G+ + ++    + +  +M ++G+ P   T   + D +  
Sbjct: 253 FNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCL 312

Query: 428 IGLAREAKRVLKSAEE 443
           +     AK +  +  +
Sbjct: 313 VKEVNTAKSIFNTMAQ 328


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 190/388 (48%), Gaps = 4/388 (1%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           T+  ++  L ++ + K     +  +E  G+KP  + +N ++   S  G ++ A  I  +M
Sbjct: 228 TFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEM 287

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
           K  G +P   TYN ++    N G+  E L+ ++ +     + P+  +YNIL+R   +   
Sbjct: 288 KSKGFQPDLQTYNPILSWMCNEGRASEVLREMKGIG----LVPDSVSYNILIRGCSNNGD 343

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           +E A+    +MV  G+ P   TYNTL        +   AE ++ E++   +  +  T  I
Sbjct: 344 LETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 403

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           +++GYC+ G+ + A      M    + P    + SLI        +   D+    +   G
Sbjct: 404 VINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKG 463

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           +KPD+V  +T+MD   + G M +   +  +M +  I+PD   ++ L +G    G+ ++A 
Sbjct: 464 MKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEAR 523

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            ++  M++ G+ P+ + + T+ISG+      + A  + ++M  +G NP L TY  LL G 
Sbjct: 524 ELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGL 583

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            + +    AEELL+ M+ +G+ P  S+ 
Sbjct: 584 SKNQDGELAEELLREMKSEGIVPNDSSF 611



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 182/383 (47%), Gaps = 4/383 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+L  +GK  +A      +   G +PT++TY TLV   + + R +    +IS+++  G 
Sbjct: 233 INVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGF 292

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD   +N +++     G   E   + ++MK  G  P + +YN LI+G  N G  E +  
Sbjct: 293 QPDLQTYNPILSWMCNEGRASE---VLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFA 349

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M +   V P   TYN L+     +N IE A  ++ ++   GI  D+VTYN +   Y
Sbjct: 350 YRDEMVKQGMV-PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGY 408

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q+G+  +A  +  EM  + ++P + T   ++   C+     +A     ++    + P+L
Sbjct: 409 CQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDL 468

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V+ N+L+ G     + D     L  M+   + PD VT++ +M      G   + +E+  +
Sbjct: 469 VMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGE 528

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M + GI+PD   ++ L  GY + G+ + A  +   M   G +P ++ +  ++ G      
Sbjct: 529 MKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQD 588

Query: 361 MQRAMSIYEKMCEIGINPNLKTY 383
            + A  +  +M   GI PN  ++
Sbjct: 589 GELAEELLREMKSEGIVPNDSSF 611



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/403 (24%), Positives = 183/403 (45%), Gaps = 33/403 (8%)

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +ILF+ M+    +   VDEA++ F  MK+ G  P T T N ++     + + E +     
Sbjct: 156 TILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYA 215

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +   +K N  T+NI++   C +  +++A   +  M + GI+P  VTYNTL + Y+  
Sbjct: 216 DMYR-MEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLR 274

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR----------------- 226
           G    A  ++ EM++   +P+ +T   I+S  C EG   + +R                 
Sbjct: 275 GRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLREMKGIGLVPDSVSYNIL 334

Query: 227 -------------FLYR--MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
                        F YR  M +  + P    +N+LI G       +  +  +  + E G+
Sbjct: 335 IRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 394

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
             D VT++ +++ +   G   K   + D+M+  GI+P    ++ L     R  + ++A+ 
Sbjct: 395 VLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADE 454

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +   +   G+ P++VM  T++ G C    M RA S+ ++M  + I+P+  TY  L+ G  
Sbjct: 455 LFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLC 514

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
              +   A EL+  M+ +G++P   +   +   +   G  + A
Sbjct: 515 GEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA 557



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 144/269 (53%), Gaps = 1/269 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++++G  PT  TY TL+  L  + + ++   LI ++ + G+  DS+ +N +IN   + G+
Sbjct: 354 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGD 413

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             +A  +  +M   G KPT  TY +LI       K  E+ +L + +   K +KP+    N
Sbjct: 414 AKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVV-GKGMKPDLVMMN 472

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+   C+  +++ A++++ +M    I PD VTYN L R     G+   A +++ EM+  
Sbjct: 473 TLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRR 532

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            ++P+  +   ++SGY K+G+ + A      M  L  +P L+ +N+L+KG    +D +  
Sbjct: 533 GIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELA 592

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
           ++ L  M+  G+ P+  +F ++++A S +
Sbjct: 593 EELLREMKSEGIVPNDSSFCSVIEAMSKS 621



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 114/213 (53%), Gaps = 1/213 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  + + ++ +G +PT  TYT+L+  L R+ + +    L  KV   GMKPD ++ 
Sbjct: 412 GDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMM 471

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +++    +GN+D A  + ++M      P   TYN L++G    GK EE+ +L+  M +
Sbjct: 472 NTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKR 531

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + +KP+  +YN L+  +  K   + A+ V  +M++ G  P  +TYN L +  ++  +  
Sbjct: 532 -RGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGE 590

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
            AE++L EM++  + PN+ +   ++    K  N
Sbjct: 591 LAEELLREMKSEGIVPNDSSFCSVIEAMSKSDN 623



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/358 (22%), Positives = 162/358 (45%), Gaps = 36/358 (10%)

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           +++ D+    +   ++ +VR +C    ++EA    Y M   G  P   T N +    ++ 
Sbjct: 145 VLAHDRLQTKSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRL 204

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                A     +M   +++ N  T  I+++  CKEG ++ A  FL  M+   + P +V +
Sbjct: 205 NRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTY 264

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW--------------SSAG 289
           N+L++G+      +G    ++ M+  G +PD+ T++ I+ +W                 G
Sbjct: 265 NTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPIL-SWMCNEGRASEVLREMKGIG 323

Query: 290 LM----------------GKCQEIF---DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           L+                G  +  F   D+MVK G+ P  + ++ L  G     + + AE
Sbjct: 324 LVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAE 383

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            ++  +R+ G+  + V +  VI+G+C     ++A +++++M   GI P   TY +L++  
Sbjct: 384 ILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVL 443

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSM 448
               +   A+EL + +  KG++P    +  + D   A G    A  +LK  E DR ++
Sbjct: 444 CRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLK--EMDRMNI 499



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 26/108 (24%), Positives = 56/108 (51%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L G+GK  EA  +   +   G +P  I+Y TL++  +++   K    +  ++   G 
Sbjct: 510 MRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGF 569

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
            P  + +NA++   S++ + + A ++ ++MK  G  P  S++ ++I+ 
Sbjct: 570 NPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEA 617


>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
          Length = 618

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 193/412 (46%), Gaps = 7/412 (1%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F+ ++  G  P+++TY TL+ A   Q        +  ++    + P+ + +  MI A  
Sbjct: 160 LFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALC 219

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           E   + +A  +F +MK++G +P   TYN L+  +      + +L     + +   V PND
Sbjct: 220 EEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLV-PND 278

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
             +  L+   C  N I EA N+   M    + P    YN+L     + G    A     E
Sbjct: 279 VIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQE 338

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           +   ++RP+E TC I+V G C  G M+ A RFL  M++  +  N   +N LI  +    +
Sbjct: 339 IIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGN 398

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D      T M E GV+P+VVT+S+++D  S  G M     I+ +MV  G+EP++  ++ 
Sbjct: 399 LDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTA 458

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI---YEKMC 372
           L  G+ + G+   A  +   M + G++ N +  + ++ G C   ++Q A+     Y    
Sbjct: 459 LIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQK 518

Query: 373 EIGINPNLK---TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           +   NP++    TY TL++G     Q   A      M + G+ P + T  LV
Sbjct: 519 KSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLV 570



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 190/405 (46%), Gaps = 15/405 (3%)

Query: 34  TLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS 93
            LV AL++       LS+  ++ +    P     NA+++   ++  +    ++F +M   
Sbjct: 111 VLVIALSQMALPDEALSVFGRLRELPALPAC---NAILDGLVKAHMLARVWELFDEMLGR 167

Query: 94  GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
           G  P+  TYNTLI    + G   ++ ++   M   + + PN  TY  ++ A C ++ I +
Sbjct: 168 GMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVA-RRIDPNVVTYTTMIYALCEEDCIGD 226

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A  +  +M  +G++P+  TYN L  ++ +      A    +++    + PN+     ++ 
Sbjct: 227 AEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLID 286

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---G 270
           G CK   + +A      M   EV P + V+NSLI G      S    +AL   +E     
Sbjct: 287 GLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFR---SGYAQEALAFFQEIIRKE 343

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           ++PD  T S ++      G M       + M ++GI  +   +++L   Y ++G   +A 
Sbjct: 344 LRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEAL 403

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
              T M + GV PNVV ++++I G     +M+ AM+IY +M   G+ PN+ TY  L+ G+
Sbjct: 404 VTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGH 463

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
            +      A  L + MEEKG+     T+ ++ D     GL RE +
Sbjct: 464 AKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVD-----GLCRENR 503



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 168/382 (43%), Gaps = 23/382 (6%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F  + E G RP L TY  L+++  ++   K  L     + K G+ P+ ++F  +I
Sbjct: 226 DAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLI 285

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   ++  + EA  IF  M      PT   YN+LI G    G  +E+L   Q + + K +
Sbjct: 286 DGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIR-KEL 344

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +P++ T +I+VR  C    ++ A   +  M  SGI  +A  YN L   Y + G    A  
Sbjct: 345 RPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALV 404

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
               M    V PN  T   ++ G+ K G ME AM     M    V PN+V + +LI G  
Sbjct: 405 TCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHA 464

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE-IFDDMVKAGIE--- 307
              D D        MEE G+  + +T S ++D        G C+E    D V+  +E   
Sbjct: 465 KNGDMDAAFWLQKEMEEKGIYSNAITVSVLVD--------GLCRENRVQDAVRFIMEYSG 516

Query: 308 -------PDIH---VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
                  P I     +  L  G    G+  +A    + MR  G+ P+   +T VI G C 
Sbjct: 517 QKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCM 576

Query: 358 AVKMQRAMSIYEKMCEIGINPN 379
              +  AM +Y  M ++G+ P 
Sbjct: 577 LGYVLNAMMLYADMVKVGVKPT 598



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 134/307 (43%), Gaps = 42/307 (13%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA   F  +I +  RP   T + +V  L    + +     +  +++ G+  ++  +
Sbjct: 327 GYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAY 386

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I+   +SGN+DEA+    +M + G +P   TY++LI G+   G+ E ++ +   M  
Sbjct: 387 NVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVA 446

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K V+PN  TY  L+        ++ A+ +  +M   GI  +A+T +             
Sbjct: 447 -KGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVS------------- 492

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR---MKELEVHP---NLV 241
                                 ++V G C+E  ++DA+RF+      K+ E +P   N V
Sbjct: 493 ----------------------VLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSV 530

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            + +LI G       +      + M + G+ PD  T++ ++      G +     ++ DM
Sbjct: 531 TYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADM 590

Query: 302 VKAGIEP 308
           VK G++P
Sbjct: 591 VKVGVKP 597



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 118/267 (44%), Gaps = 6/267 (2%)

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P    C  I+ G  K   +         M    + P++V +N+LI      +    V KA
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINA---CRHQGDVAKA 192

Query: 263 LTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
             + ++     + P+VVT++T++ A      +G  + +F +M +AG+ P+++ ++ L   
Sbjct: 193 WEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSS 252

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           + +    + A      + K G+ PN V+FTT+I G C A ++  A +I+  M    + P 
Sbjct: 253 HFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPT 312

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           +  Y +L+ G   +     A    Q +  K +RP + T  +V       G  + A R L+
Sbjct: 313 VPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLE 372

Query: 440 SAEEDRQSMPNKKDEIAVESIHRKQNL 466
             ++   ++      + ++   +  NL
Sbjct: 373 VMQQSGIALNAAAYNVLIDEYCKSGNL 399


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 195/388 (50%), Gaps = 12/388 (3%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+ HEA  + + ++  G     +TY  L+  L R  +     +L++K+      P+
Sbjct: 285 LCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----PN 340

Query: 64  SILFNAMINACSESGNVDEAMKI-FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           ++L+N +I+    SG  +EA  + +  M  +G +P   T+N +I G    G    +L+LL
Sbjct: 341 TVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELL 400

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             M   K  +PN  TY IL+  +C +  +EEA  +V  M A G+  + V YN L  A  +
Sbjct: 401 NEMVA-KRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCK 459

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G    A Q+  EM     +P+  T   +++G CK   ME+A+   + M    V  N V 
Sbjct: 460 DGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVT 519

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +N+L+  FL ++DS  + +A  L++E    G   D +T++ ++ A    G + K   +F+
Sbjct: 520 YNTLVHAFL-MRDS--IQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFE 576

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M+  GI P I   +IL  G  R G+   A   L  M   G+ P++V + ++I+G C   
Sbjct: 577 EMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMG 636

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLL 387
            +Q A +++ K+   GI P+  TY TL+
Sbjct: 637 HVQEASNLFNKLQSEGIRPDAITYNTLI 664



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 127/520 (24%), Positives = 226/520 (43%), Gaps = 73/520 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ILV    P  A  +F  ++  G  PT+ T+  ++ AL       S  SL+  + K G 
Sbjct: 177 LDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGC 236

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+S+++  +I+A  E+  V EA+++ + M    C+P   T+N +I G    G+  E+ K
Sbjct: 237 VPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAK 296

Query: 121 LLQLM-----SQD-------------------------KNVKPNDRTYNILVRAWCSKNS 150
           LL  M     S D                         K   PN   YN L+  + +   
Sbjct: 297 LLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGR 356

Query: 151 IEEAWNVVYK-MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            EEA +++Y  MV +G +PDA T+N +     + G    A ++L EM   +  PN  T  
Sbjct: 357 FEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYT 416

Query: 210 IIVSGYCK-----------------------------------EGNMEDAMRFLYRMKEL 234
           I+++G+CK                                   +GN+E+A++    M   
Sbjct: 417 ILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGK 476

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLM 291
              P++  FNSLI G   +  +  +++AL+L  +    GV  + VT++T++ A+     +
Sbjct: 477 GCKPDIYTFNSLING---LCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSI 533

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            +  ++ D+M+  G   D   ++ L K   + G  +K   +   M   G+ P ++    +
Sbjct: 534 QQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNIL 593

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           ISG C   K+  A+   + M   G+ P++ TY +L+ G  +      A  L   ++ +G+
Sbjct: 594 ISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGI 653

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
           RP   T   +       G+  +A  +L     D   +PN+
Sbjct: 654 RPDAITYNTLISRHCHEGMFNDACLLLYKG-VDSGFIPNE 692



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 165/319 (51%), Gaps = 1/319 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV KG    A  + N ++ +   P +ITYT L+    +Q R +    +++ +   G+  +
Sbjct: 387 LVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLN 446

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ +N +I A  + GN++EA+++F +M   GCKP   T+N+LI G     K EE+L L  
Sbjct: 447 TVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYH 506

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  +  V  N  TYN LV A+  ++SI++A+ +V +M+  G   D +TYN L +A  + 
Sbjct: 507 DMFLE-GVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKT 565

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G   +   +  EM    + P   +C I++SG C+ G + DA++FL  M    + P++V +
Sbjct: 566 GAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTY 625

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           NSLI G   +            ++  G++PD +T++T++      G+      +    V 
Sbjct: 626 NSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVD 685

Query: 304 AGIEPDIHVFSILAKGYVR 322
           +G  P+   +SIL    V+
Sbjct: 686 SGFIPNEVTWSILINYIVK 704



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/386 (23%), Positives = 170/386 (44%), Gaps = 40/386 (10%)

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ------ 123
           +I+     G+     K+ ++MKD G     S +  ++K YG  G P ++ +LL       
Sbjct: 105 LIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVY 164

Query: 124 ---------------LMSQD--------------KNVKPNDRTYNILVRAWCSKNSIEEA 154
                          L+  D              + V P   T+ ++++A C  + ++ A
Sbjct: 165 SCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSA 224

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
            +++  M   G  P++V Y TL  A  +      A Q+L +M      P+ +T   ++ G
Sbjct: 225 CSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHG 284

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
            C+ G + +A + L RM       + + +  L+ G   +     VD+A  L+ +    P+
Sbjct: 285 LCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQ---VDEARALLNKIP-NPN 340

Query: 275 VVTFSTIMDAWSSAGLMGKCQE-IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
            V ++T++  + ++G   + ++ ++++MV AG EPD + F+I+  G V+ G    A  +L
Sbjct: 341 TVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELL 400

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M      PNV+ +T +I+G+C   +++ A  I   M   G++ N   Y  L+    + 
Sbjct: 401 NEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKD 460

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQ 419
                A +L   M  KG +P   T  
Sbjct: 461 GNIEEALQLFGEMSGKGCKPDIYTFN 486



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 3/177 (1%)

Query: 265 LMEEFGV---KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           L++ +GV    P   +++ ++D             +F DM+  G+ P ++ F ++ K   
Sbjct: 157 LLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALC 216

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
              E   A S+L  M K+G  PN V++ T+I   C   ++  A+ + E M  +   P+++
Sbjct: 217 MVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQ 276

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           T+  ++ G   A +   A +LL  M  +G      T   +      +G   EA+ +L
Sbjct: 277 TFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALL 333


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 182/374 (48%), Gaps = 2/374 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKV-EKDGMKPDSIL 66
           G+   A  + + L  +G  P ++TYT LV    ++ R +    ++ ++ E + +  D + 
Sbjct: 213 GQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVA 272

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           + A+IN   + G +++A ++  +M D+G +     YNT+I GY  +G+  E  KLLQ  +
Sbjct: 273 YGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQ-AN 331

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + + V  ++ +YN LV  +C K  + +A+     MV +G     +TYNTL   +   G  
Sbjct: 332 EYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAI 391

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++ F M    V PNE +C  ++ G+ K G  E A+          +  N+V  N++
Sbjct: 392 DDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTV 451

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G    +     ++    M+E+    D +T+ T++D +   G +G+  +I  +M   G 
Sbjct: 452 INGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGF 511

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P + +F+    G   A +  K   I   M   G+ PN V +  +I+GWC    +  A  
Sbjct: 512 VPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACI 571

Query: 367 IYEKMCEIGINPNL 380
           +Y +M E G+ PNL
Sbjct: 572 LYFEMVEKGLKPNL 585



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/425 (22%), Positives = 196/425 (46%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N LV  G    A  +F  +   G  P   T   +  A  R  R       + ++E+ G+
Sbjct: 136 LNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGL 195

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             + + ++A+++     G  + A K+   ++  G  P   TY  L+KGY   G+ EE+ K
Sbjct: 196 DVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEK 255

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +++ + +++ +  ++  Y  L+  +C +  +E+A  V  +M+ +G+Q +   YNT+   Y
Sbjct: 256 VVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGY 315

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G     E++L   +   V  +E +   +V GYC++G M  A      M         
Sbjct: 316 CKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTT 375

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +N+L+ GF      D   K   LM + GV P+ ++ ST++D +  AG   +   ++ +
Sbjct: 376 LTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKE 435

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
            +  G+  ++   + +  G  +     +AE +   M+++    + + + T+I G+C    
Sbjct: 436 TLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGD 495

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           + RA  I  +M  +G  P+++ + + + G   AKQ  +  ++   M  KG+ P   T   
Sbjct: 496 LGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGA 555

Query: 421 VADSW 425
           +   W
Sbjct: 556 LIAGW 560



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 204/431 (47%), Gaps = 5/431 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A Y+F+ + + G R TL +   L+  L +     + +++  ++   G  PD    
Sbjct: 108 GQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTV 167

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             M  A    G V  A    ++M++ G       Y+ ++ GY  +G+ E + KLL  + Q
Sbjct: 168 AIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSL-Q 226

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS-GIQPDAVTYNTLARAYAQYGET 186
            K + PN  TY +LV+ +C +  +EEA  VV ++  +  I  D V Y  L   Y Q G  
Sbjct: 227 VKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRM 286

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++  EM +  V+ N      +++GYCK G M +  + L   +   V+ +   +N+L
Sbjct: 287 EDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTL 346

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + G+          +   +M   G     +T++T+++ + S G +    +++  M+K G+
Sbjct: 347 VDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGV 406

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+    S L  G+ +AG+ ++A ++       G+  NVV   TVI+G C   +M  A  
Sbjct: 407 VPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEE 466

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           ++ +M E     +  TY TL+ GY +     RA ++   ME  G  P   ++++      
Sbjct: 467 LFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVP---SVEMFNSFIT 523

Query: 427 AIGLAREAKRV 437
            + +A+++ +V
Sbjct: 524 GLFIAKQSGKV 534



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/475 (23%), Positives = 203/475 (42%), Gaps = 62/475 (13%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           +Y TLV    R+            + ++G    ++ +N ++N     G +D+A+K++  M
Sbjct: 342 SYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLM 401

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
              G  P   + +TL+ G+   GK E++L L +  +  + +  N  T N ++   C    
Sbjct: 402 LKRGVVPNEISCSTLLDGFFKAGKTEQALNLWK-ETLARGLARNVVTINTVINGLCKNRR 460

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN------------ 198
           + EA  + ++M       D++TY TL   Y + G+  RA Q+  EM+N            
Sbjct: 461 MTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNS 520

Query: 199 --------------NQVR---------PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
                         N +R         PN  T G +++G+CKEGN+ DA    + M E  
Sbjct: 521 FITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKG 580

Query: 236 VHPNLVVFNSLIKGFL-------------DIKDSD----------GVDKALTLMEEFG-- 270
           + PNL + + L+  F               + D+D           + K   ++E     
Sbjct: 581 LKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGG 640

Query: 271 -VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
             +   + ++ ++      G +   + +F+D+   G  PD   +S L  G   +G    A
Sbjct: 641 NHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLA 700

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             +   M    + PN+V + ++I G C +  + RA+S++ K+   GI+PN  TY TL+ G
Sbjct: 701 FGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDG 760

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           + +      A +L Q M ++G++P   T  ++       G   EA ++L    E+
Sbjct: 761 HCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIEN 815



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 199/442 (45%), Gaps = 33/442 (7%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   +A  ++  +++ G  P  I+ +TL+    +  + +  L+L  +    G+
Sbjct: 382 LNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGL 441

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEE 117
             + +  N +IN   ++  + EA ++F +MK+  C   + TY TLI GY   G++G+  +
Sbjct: 442 ARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQ 501

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
               +++  ++    P+   +N  +          +  ++  +M A G+ P+ VTY  L 
Sbjct: 502 ----IRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALI 557

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE---- 233
             + + G  + A  + FEM    ++PN   C ++VS + +EG +++A   L ++ +    
Sbjct: 558 AGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMI 617

Query: 234 -------LEVHPNLVVFNSLIKG------------FLDIKDSDGVDKALTLMEEFGVK-- 272
                  L +     +  SL  G             L +     V  A  L E+  VK  
Sbjct: 618 QDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGF 677

Query: 273 -PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            PD  T+S+++   S++G +     + D+M+ A + P+I  ++ L  G  ++    +A S
Sbjct: 678 IPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVS 737

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +   ++  G+ PN + + T+I G C       A  + +KM + GI P + TY  L+ G  
Sbjct: 738 LFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLC 797

Query: 392 EAKQPWRAEELLQVMEEKGVRP 413
                  A +LL  M E  V P
Sbjct: 798 TQGYMEEAIKLLDQMIENNVDP 819



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/439 (21%), Positives = 194/439 (44%), Gaps = 33/439 (7%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  ++   +  G    ++T  T++  L + +R      L  ++++     DS+ +
Sbjct: 424 GKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTY 483

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+   + G++  A +I  +M++ G  P+   +N+ I G   + K    +  +++   
Sbjct: 484 RTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGL-FIAKQSGKVNDIRVEMS 542

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K + PN  TY  L+  WC + ++ +A  + ++MV  G++P+    + L   + + G+  
Sbjct: 543 AKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVD 602

Query: 188 RAEQMLFEMQNNQVRPN---------------ERTCG-----------IIVSGYCKEGNM 221
            A  +L ++ +  +  +               E   G           I++ G CK G +
Sbjct: 603 EANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRV 662

Query: 222 EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTF 278
            DA      +K     P+   ++SLI G      S  +D A  L +E     + P++VT+
Sbjct: 663 ADARNLFEDLKVKGFIPDNFTYSSLIHG---CSASGSIDLAFGLRDEMLSARLTPNIVTY 719

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           ++++     +  + +   +F+ +   GI P+   ++ L  G+ + G   +A  +   M K
Sbjct: 720 NSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIK 779

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            G+ P V  +T +I G C    M+ A+ + ++M E  ++PN  TY TL+ GY        
Sbjct: 780 EGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKA 839

Query: 399 AEELLQVMEEKGVRPKKST 417
             +L   M   G+ P   T
Sbjct: 840 ITKLYNEMHICGLLPANWT 858



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/346 (23%), Positives = 162/346 (46%), Gaps = 8/346 (2%)

Query: 98  TTSTYNTLIKGYGNVGKPEESLKLLQLMSQ---DKNVKPNDRTYNILVRAWCSKNSIEEA 154
           + ++++ L++ + + G+ +++L +   M +    + ++  +R  N LV+A      I  A
Sbjct: 93  SAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQA----GDIGTA 148

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
             V  +M  +G  PD  T   +A+AY + G    A   L EM+   +  N      ++ G
Sbjct: 149 VAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDG 208

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT-LMEEFGVKP 273
           YC+ G  E A + L+ ++   + PN+V +  L+KG+      +  +K +  + E   +  
Sbjct: 209 YCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVI 268

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           D V +  +++ +   G M     + D+M+ AG++ ++ V++ +  GY + G   + E +L
Sbjct: 269 DEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLL 328

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
            +    GV+ +   + T++ G+C    M +A    + M   G      TY TLL G+   
Sbjct: 329 QANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSR 388

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
                A +L  +M ++GV P + +   + D +   G   +A  + K
Sbjct: 389 GAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWK 434



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 3/184 (1%)

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           +F  ++ A + AG +     +FD+M KAG    +   + L    V+AG+   A ++   M
Sbjct: 96  SFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQM 155

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
           R  G  P+      +   +C   ++  A    ++M E+G++ NL  Y  ++ GY    Q 
Sbjct: 156 RCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQT 215

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIA 456
             A +LL  ++ KG+ P   T  L+   +   G   EA++V+K  +E+ + +    DE+A
Sbjct: 216 EVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVI---DEVA 272

Query: 457 VESI 460
             ++
Sbjct: 273 YGAL 276


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 215/465 (46%), Gaps = 40/465 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A ++F  +   G +    +YT L+  L   K  +  L L   +++DG  P+   F
Sbjct: 117 GELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAF 176

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+   +SG V +A  +F  M  +G  P+  TYN +I GY  +G+  ++LK+ +LM +
Sbjct: 177 TFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEK 236

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA---QYG 184
           +    P+D TYN L+   C + + EEA  ++   V  G  P  VT+  L   Y    ++ 
Sbjct: 237 N-GCHPDDWTYNTLIYGLCDQKT-EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFD 294

Query: 185 ETYR--------------------------------AEQMLFEMQNNQVRPNERTCGIIV 212
           +  R                                A+++L E+  N + PN  T   I+
Sbjct: 295 DALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSII 354

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
            GYCK G ++ A+  L  M+     PN   +NSL+ G +  K        LT M++ G+ 
Sbjct: 355 DGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGII 414

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           P+V+T++T++              +F+ M + G++PD H +++L     +AG  ++A S 
Sbjct: 415 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 474

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           +  +RK GV    V +TT+I G+  A     A ++ E+M + G  P+  TY  LL    +
Sbjct: 475 I--VRK-GVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCK 531

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
            K+   A  +L  M  +G++       ++ D     G    AKR+
Sbjct: 532 QKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRM 576



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 193/413 (46%), Gaps = 4/413 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  + N  ++EG  PT++T+T L+      ++F   L + +K+     K D  +F 
Sbjct: 257 KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFG 316

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +IN+  +   + EA ++  ++  +G  P   TY ++I GY   GK + +L++L++M +D
Sbjct: 317 KLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 376

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
              +PN  TYN L+        + +A  ++ KM   GI P+ +TY TL +      +   
Sbjct: 377 -GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDN 435

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A ++   M+ N ++P+E    ++    CK G  E+A  F+ R     V    V + +LI 
Sbjct: 436 AFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKG---VALTKVYYTTLID 492

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           GF    ++D     +  M + G  PD  T+S ++ A      + +   I D M   GI+ 
Sbjct: 493 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 552

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
            I  ++IL    +R G+   A+ +   M   G  P+   +T  I+ +C   +++ A  + 
Sbjct: 553 TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 612

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            KM   G+ P++ TY  L+ G G      RA   L+ M      P   T  L+
Sbjct: 613 LKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLL 665



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 114/474 (24%), Positives = 212/474 (44%), Gaps = 20/474 (4%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV   K H+A  +   + ++G  P +ITYTTL+     +  F +   L   +E++G+KPD
Sbjct: 392 LVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPD 451

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +  + +A  ++G  +EA     +    G   T   Y TLI G+   G  + +  L++
Sbjct: 452 EHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDFAATLIE 508

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D+   P+  TY++L+ A C +  + EA  ++ +M   GI+     Y  L     + 
Sbjct: 509 RMI-DEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLRE 567

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A++M  EM ++  +P+  T  + ++ YCKEG +EDA   + +M+   V P++V +
Sbjct: 568 GKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTY 627

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL------------- 290
           N LI G   +   D     L  M     +P+  T+  ++       L             
Sbjct: 628 NILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWN 687

Query: 291 ---MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
              +    ++ + MVK G+ P +  +S L  G+ +AG  ++A  +L  M   G+ PN  +
Sbjct: 688 LIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDI 747

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           +T +I   C+    ++A+S    M E G  P L++Y  L+ G        + + L   + 
Sbjct: 748 YTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLL 807

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIH 461
           E G    +   +++ D     G      ++L   E+    + ++   +    +H
Sbjct: 808 ELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTNKMH 861



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/508 (23%), Positives = 223/508 (43%), Gaps = 61/508 (12%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L+ K +  EA  + N +   G  P +ITYT+++    +  +    L ++  +E+DG 
Sbjct: 319 INSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGC 378

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P++  +N+++    +   + +AM +  KM+  G  P   TY TL++G  +    + + +
Sbjct: 379 QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFR 438

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L ++M Q+  +KP++  Y +L  A C     EEA++ +   V  G+    V Y TL   +
Sbjct: 439 LFEMMEQN-GLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDGF 494

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++ G T  A  ++  M +    P+  T  +++   CK+  + +A+  L +M    +   +
Sbjct: 495 SKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTI 554

Query: 241 VVFNSLIKGFLDIKDSD-----------------------------------GVDKALTL 265
             +  LI   L     D                                     +  +  
Sbjct: 555 FAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILK 614

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK------- 318
           ME  GV PDVVT++ ++D     G + +       MV A  EP+   + +L K       
Sbjct: 615 MEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNL 674

Query: 319 GYVRAG---------EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
            YVR+          E      +L  M K+G++P V  ++++I+G+C A +++ A  + +
Sbjct: 675 AYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLD 734

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
            MC  G++PN   Y  L+    + K   +A   + +M E G +P+  + +L+      +G
Sbjct: 735 HMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLL-----VVG 789

Query: 430 LAREAK-RVLKSAEEDRQSMPNKKDEIA 456
           L  E     +KS   D   +    DE+A
Sbjct: 790 LCNEGDFEKVKSLFCDLLELGYNHDEVA 817



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/468 (23%), Positives = 210/468 (44%), Gaps = 34/468 (7%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  +A  +F+ + + G  P+++TY  ++   ++  R    L +   +EK+G  PD
Sbjct: 183 LCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 242

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +N +I    +    +EA ++       G  PT  T+  LI GY    K +++L++  
Sbjct: 243 DWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKN 301

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K  K + + +  L+ +   K+ ++EA  ++ ++ A+G+ P+ +TY ++   Y + 
Sbjct: 302 KMMSSK-CKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKS 360

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A ++L  M+ +  +PN  T   ++ G  K+  +  AM  L +M++  + PN++ +
Sbjct: 361 GKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITY 420

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPD----------------------------- 274
            +L++G  D  D D   +   +ME+ G+KPD                             
Sbjct: 421 TTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGV 480

Query: 275 ---VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
               V ++T++D +S AG       + + M+  G  PD + +S+L     +     +A  
Sbjct: 481 ALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALP 540

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           IL  M   G+   +  +T +I       K   A  +Y +M   G  P+  TY   +  Y 
Sbjct: 541 ILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYC 600

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           +  +   AE+L+  ME +GV P   T  ++ D    +G    A   LK
Sbjct: 601 KEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLK 648



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 188/382 (49%), Gaps = 2/382 (0%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           Y   + +L R    + +  + S++ +DG+ PD++ +N MI +  + G++  A + F+ + 
Sbjct: 36  YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 95

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
           + G +P T T N L+ GY   G+  ++  L  LM      + N+ +Y IL++  C    +
Sbjct: 96  EGGLEPETFTCNALVLGYCRTGELRKACWLF-LMMPLMGCQRNEYSYTILIQGLCDAKCV 154

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
            +A  +   M   G  P+   +  L     + G    A  +   M  N V P+  T   +
Sbjct: 155 RKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAM 214

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           + GY K G M DA++    M++   HP+   +N+LI G  D K  +  +     ++E G 
Sbjct: 215 IVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKE-GF 273

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            P VVTF+ +++ +  A        + + M+ +  + D+ VF  L    ++    ++A+ 
Sbjct: 274 TPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKE 333

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +L  +   G+ PNV+ +T++I G+C + K+  A+ + + M   G  PN  TY +L++G  
Sbjct: 334 LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 393

Query: 392 EAKQPWRAEELLQVMEEKGVRP 413
           + K+  +A  LL  M++ G+ P
Sbjct: 394 KDKKLHKAMALLTKMQKDGIIP 415



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/419 (23%), Positives = 200/419 (47%), Gaps = 2/419 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +++ L+++G  P  +TY T++ +  ++    +       + + G++P++   NA++    
Sbjct: 55  VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYC 114

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
            +G + +A  +F  M   GC+    +Y  LI+G  +     ++L L  +M +D    PN 
Sbjct: 115 RTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRD-GCSPNV 173

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           R +  L+   C    + +A  +   M  +G+ P  +TYN +   Y++ G    A ++   
Sbjct: 174 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL 233

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M+ N   P++ T   ++ G C +   E+A   L    +    P +V F +LI G+   + 
Sbjct: 234 MEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEK 292

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D   +    M     K D+  F  ++++      + + +E+ +++   G+ P++  ++ 
Sbjct: 293 FDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTS 352

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           +  GY ++G+   A  +L  M + G  PN   + +++ G     K+ +AM++  KM + G
Sbjct: 353 IIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDG 412

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           I PN+ TY TLL G  +      A  L ++ME+ G++P +    ++ D+    G A EA
Sbjct: 413 IIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA 471



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 146/346 (42%), Gaps = 40/346 (11%)

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           + YN  +R+    +  E    V  ++V  G+ PD VTYNT+ ++Y + G+   A +    
Sbjct: 34  KCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRL 93

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           +    + P   TC  +V GYC+ G +  A      M  +    N   +  LI+G  D K 
Sbjct: 94  LLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAK- 152

Query: 256 SDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
              V KAL L   M+  G  P+V  F+ ++     +G +G  + +FD M + G+ P +  
Sbjct: 153 --CVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMT 210

Query: 313 FSILAKGYVRAG----------------------------------EPQKAESILTSMRK 338
           ++ +  GY + G                                  + ++AE +L +  K
Sbjct: 211 YNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVK 270

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            G  P VV FT +I+G+C A K   A+ +  KM       +L+ +  L+    +  +   
Sbjct: 271 EGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKE 330

Query: 399 AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           A+ELL  +   G+ P   T   + D +   G    A  VLK  E D
Sbjct: 331 AKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 376


>gi|297846140|ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297336793|gb|EFH67210.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 689

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 99/409 (24%), Positives = 193/409 (47%), Gaps = 1/409 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  + + +++ G  P ++T+ TL+    ++        L   +E+ G+ PD I ++ +I+
Sbjct: 162 ASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLID 221

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              ++G +    K+F +    G K     +++ I  Y   G    +  + + M   + + 
Sbjct: 222 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLC-QGIS 280

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           PN  TY IL++  C    I EA+ +  +++  G++P  VTY++L   + +YG       +
Sbjct: 281 PNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFAL 340

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             +M      P+    G++V G CK+G M  A+RF  +     + PN+VVFNSLI G+  
Sbjct: 341 YEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCR 400

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +   D   K   LM  +G+KPDV T +T+M      G + +   +F  M K G+EPD   
Sbjct: 401 LNRCDEALKVFRLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVA 460

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           F  L   + +  +P     +   M++  +  ++ +   VI+       ++ A   +  + 
Sbjct: 461 FCTLMDAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLL 520

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           E  + P++ TY T++ GY   ++   A  + ++++     P   T+ ++
Sbjct: 521 EGKMEPDIVTYNTMICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTIL 569



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/376 (22%), Positives = 183/376 (48%), Gaps = 9/376 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+ +EA  I+  +++ G  P+++TY++L+    +    +S  +L   + K G  PD
Sbjct: 293 LCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPD 352

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++  +++   + G +  A++   K      +P    +N+LI G+  + + +E+LK+ +
Sbjct: 353 VVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFR 412

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           LM     +KP+  T   L+R    +  ++E   + ++M   G++PDAV + TL  A+ + 
Sbjct: 413 LMGI-YGIKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKN 471

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +     Q+   MQ N++  +   C ++++   K  ++E+A +F   + E ++ P++V +
Sbjct: 472 MKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTY 531

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N++I G+  ++  D   +   +++     P+ VT + ++           C+    D   
Sbjct: 532 NTMICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTL--------CKNSDMDGAL 583

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
             I P I  +SI+  G  + G   +A +I        + P+VV +  +I G C   ++  
Sbjct: 584 RIISPSIISYSIIIDGLCKRGRVDEATNIFHQAIDAKILPDVVAYAILIRGCCKVGRLVE 643

Query: 364 AMSIYEKMCEIGINPN 379
           A  +YE M   G+ P+
Sbjct: 644 AALLYEHMLRNGVKPD 659



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 151/336 (44%), Gaps = 16/336 (4%)

Query: 102 YNTLIKGYG-NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
           +N L   YG N+ + E +L LL L S+     PN        +   S + +     V + 
Sbjct: 54  FNLLDSVYGSNLQRNETNLVLLSLESE-----PNSALDTFDGQRSDSFDKLCRGGTVPFG 108

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           + A G   DA+          + GE  +A      +     R +  +C  I+ G   +  
Sbjct: 109 VSAHGFVLDALF---------RKGEVTKALDFHRLVMERGFRVDIVSCNKILKGLSVD-Q 158

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           +E A R L  + +    PN+V F +LI GF    + D   +   +ME+ G+ PD++ +ST
Sbjct: 159 IEVASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYST 218

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++D +  AG++G   ++F   +  G++ D+ VFS     YV+ G    A  +   M   G
Sbjct: 219 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQG 278

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
           + PNVV +T +I G C   ++  A  IY ++ + G+ P++ TY +L+ G+ +        
Sbjct: 279 ISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGF 338

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
            L + M + G  P      ++ D     GL   A R
Sbjct: 339 ALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALR 374



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 105/233 (45%), Gaps = 30/233 (12%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M + V +G+  E  ++F  + + G  P  + + TL+ A  +  +    L L   ++++ +
Sbjct: 430 MRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKI 489

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D  + N +IN   +  +V+EA K F  + +   +P   TYNT+I GY ++ + +E+ +
Sbjct: 490 PADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAAR 549

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNS----------------------------IE 152
           + +++ +     PN  T  IL+   C KNS                            ++
Sbjct: 550 IFEML-KFTPFGPNAVTLTILIHTLC-KNSDMDGALRIISPSIISYSIIIDGLCKRGRVD 607

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           EA N+ ++ + + I PD V Y  L R   + G    A  +   M  N V+P++
Sbjct: 608 EATNIFHQAIDAKILPDVVAYAILIRGCCKVGRLVEAALLYEHMLRNGVKPDD 660



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 83/183 (45%), Gaps = 13/183 (7%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+L       EA   FN L+E    P ++TY T++      +R      +   ++    
Sbjct: 500 INLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARIFEMLKFTPF 559

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+++    +I+   ++ ++D A++I           +  +Y+ +I G    G+ +E+  
Sbjct: 560 GPNAVTLTILIHTLCKNSDMDGALRIISP--------SIISYSIIIDGLCKRGRVDEATN 611

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +    + D  + P+   Y IL+R  C    + EA  +   M+ +G++PD    + L RA 
Sbjct: 612 IFH-QAIDAKILPDVVAYAILIRGCCKVGRLVEAALLYEHMLRNGVKPD----DLLQRAL 666

Query: 181 AQY 183
           ++Y
Sbjct: 667 SEY 669



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 10/155 (6%)

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYV-----RAGEPQKAESILTSMRKYGVHPNVV 346
           G+  + FD + + G  P    F + A G+V     R GE  KA      + + G   ++V
Sbjct: 90  GQRSDSFDKLCRGGTVP----FGVSAHGFVLDALFRKGEVTKALDFHRLVMERGFRVDIV 145

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
               ++ G  +  +++ A  +   + + G  PN+ T+ TL+ G+ +  +  RA EL +VM
Sbjct: 146 SCNKILKGL-SVDQIEVASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVM 204

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           E++G+ P       + D +   G+     ++   A
Sbjct: 205 EQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 239


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 209/412 (50%), Gaps = 4/412 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM-KPDSILFNAMINACSESGNVDE 82
           G  P L TY  L A L +  +      L  ++E   +  PD + +N +++AC +     +
Sbjct: 310 GFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSD 369

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+ + ++M+D G K +  T+N ++KG    G+ EE+L  L++M+++  + P+  TYN L+
Sbjct: 370 ALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEE-GLAPDVITYNTLI 428

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
            A+C   ++ +A+ ++ +MV SG++ D  T NTL     +      AE++L         
Sbjct: 429 DAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFV 488

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI-KDSDGVDK 261
           P+E + G +++ Y KE   E A+     M + ++ P++  +N+LIKG   I K ++ +DK
Sbjct: 489 PDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDK 548

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
              LM++ G+ PD  T++ I+ A+   G + K  +  + M++   +PD+   + L  G  
Sbjct: 549 LNELMKK-GLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLC 607

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
             G+ +KA  +  S  + G   +V+ + T+I   C    +  A+  +  M   G+ P+  
Sbjct: 608 LHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAF 667

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
           TY  +L    EA +   A+ +L  ++E G   ++ +  L+  S   +   ++
Sbjct: 668 TYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKD 719



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 215/441 (48%), Gaps = 8/441 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG   EA  +   + +EG  PT  TY TLV+A  R    K   +++  +   G +PD   
Sbjct: 258 KGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWT 317

Query: 67  FNAMINACSESGNVDEAMKIFQKMKD-SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
           +N +     ++G VDEA K+  +M+  S   P   TYNTL+       +  ++L LL+ M
Sbjct: 318 YNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEM 377

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
            +DK VK +  T+NI+V+  C +  +EEA   +  M   G+ PD +TYNTL  AY +   
Sbjct: 378 -RDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARN 436

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
             +A  ++ EM  + ++ +  T   ++   CKE   E+A   L    +    P+ V + +
Sbjct: 437 VAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGT 496

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFG---VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           ++  +      +  + AL L +E     + P + T++T++    + G + +  +  ++++
Sbjct: 497 VMAAYF---KENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELM 553

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           K G+ PD   ++I+   Y + G+ +KA      M +    P+VV   T+++G C   K++
Sbjct: 554 KKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLE 613

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
           +A+ ++E   E G   ++ TY TL+    +      A      ME +G++P   T  +V 
Sbjct: 614 KAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVL 673

Query: 423 DSWRAIGLAREAKRVLKSAEE 443
            +    G + EA+ +L   +E
Sbjct: 674 SALSEAGRSEEAQNMLHKLDE 694



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 208/438 (47%), Gaps = 8/438 (1%)

Query: 10  PHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNA 69
           P  +  +F  LI     P   T+  LV     +      LS +S ++  G+ PD + +N 
Sbjct: 191 PQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNT 250

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK 129
           ++ A    G + EA  +  +MK  G  PT +TYNTL+  Y  +G  +++  +++ M+   
Sbjct: 251 LLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTA-F 309

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVA-SGIQPDAVTYNTLARAYAQYGETYR 188
             +P+  TYN+L    C    ++EA+ +  +M   S + PD VTYNTL  A  +Y  +  
Sbjct: 310 GFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSD 369

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  +L EM++  V+ +  T  I+V G C+EG +E+A+  L  M E  + P+++ +N+LI 
Sbjct: 370 ALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLID 429

Query: 249 GFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
            +   ++   V KA  LM+E    G+K D  T +T++          + +E+     + G
Sbjct: 430 AYCKARN---VAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRG 486

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
             PD   +  +   Y +  +P+ A  +   M K  + P++  + T+I G C   K+  A+
Sbjct: 487 FVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAI 546

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
               ++ + G+ P+  TY  ++  Y +     +A +    M E   +P   T   + +  
Sbjct: 547 DKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGL 606

Query: 426 RAIGLAREAKRVLKSAEE 443
              G   +A ++ +S  E
Sbjct: 607 CLHGKLEKAIKLFESWAE 624



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 193/394 (48%), Gaps = 16/394 (4%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  EA      + EEG  P +ITY TL+ A  + +       L+ ++ + G+K D
Sbjct: 396 LCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMD 455

Query: 64  SILFNAMI-NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           +   N ++ N C E    +EA ++ +     G  P   +Y T++  Y    KPE +L L 
Sbjct: 456 TFTLNTLLYNLCKEK-RYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLW 514

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             MS+ K + P+  TYN L++  C+   + EA + + +++  G+ PD  TYN +  AY +
Sbjct: 515 DEMSKRK-LTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCK 573

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+  +A Q   +M  N  +P+  TC  +++G C  G +E A++      E     +++ 
Sbjct: 574 EGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVIT 633

Query: 243 FNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +N+LI+     KD D VD AL     ME  G++PD  T++ ++ A S AG   + Q +  
Sbjct: 634 YNTLIQAL--CKDGD-VDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLH 690

Query: 300 DMVKAGIEPDIHVFSILAKGY--VRAGEPQKAESILTS--MRKYGVHPNVVMFTTVISGW 355
            + ++G   +   + ++      V+ G+  + +S   S    K G   +   +   +   
Sbjct: 691 KLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQES---YNKSVKEL 747

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           C   +++ A ++ ++M + G++ +  TY TL+ G
Sbjct: 748 CVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEG 781



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 155/339 (45%), Gaps = 43/339 (12%)

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           + PN  T+N+LV   CSK ++ +A + +  M   G+ PD VTYNTL +A+          
Sbjct: 206 LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAH---------- 255

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
                                    C++G + +A   L RMK+  + P    +N+L+  +
Sbjct: 256 -------------------------CRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAY 290

Query: 251 LD---IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI- 306
                IK +  V +A+T    FG +PD+ T++ +      AG + +  ++ D+M    I 
Sbjct: 291 ARLGWIKQATNVVEAMT---AFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIV 347

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD+  ++ L     +      A ++L  MR  GV  ++V    V+ G C   +++ A+ 
Sbjct: 348 SPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALG 407

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
             + M E G+ P++ TY TL+  Y +A+   +A  L+  M   G++    T+  +  +  
Sbjct: 408 RLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLC 467

Query: 427 AIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQN 465
                 EA+ +L+S  + R  +P++     V + + K+N
Sbjct: 468 KEKRYEEAEELLRSPPQ-RGFVPDEVSYGTVMAAYFKEN 505



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 89/177 (50%), Gaps = 2/177 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L   GK  +A  +F    E+G +  +ITY TL+ AL +     + L   + +E  G+
Sbjct: 603 MNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGL 662

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD+  +N +++A SE+G  +EA  +  K+ +SG      +Y  LIK      K  +  +
Sbjct: 663 QPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSY-PLIKSSAEEVKTGKDPE 721

Query: 121 LLQLMSQDKNVKPNDR-TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           +        N K  D+ +YN  V+  C    ++EA  V+ +M+  G+  D+ TY TL
Sbjct: 722 VKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITL 778


>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
 gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
          Length = 646

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 201/393 (51%), Gaps = 2/393 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV- 80
           +E +   +  YT+L++ L+R +RF   ++L   ++++G + +++ +N M++   + G+  
Sbjct: 67  DESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSW 126

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           D    +FQ+MKD    P   TYNT+I         +E+L+L Q M ++    PN  TYN 
Sbjct: 127 DRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEM-KEAGCCPNRVTYNA 185

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+  +      +EA  ++ +M A+GI P+ VTYN L  AYA+ G    A  +   + +  
Sbjct: 186 LLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKG 245

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           + P+E T   ++S + +    E A+     M++    PN+V +N LI  +  ++  D + 
Sbjct: 246 LCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMM 305

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           K    M+E    PD+VT+++++ ++ + G++ +   +F +M +AG  P +  F+IL + Y
Sbjct: 306 KVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECY 365

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            R G    +  I   + + G+ P V  F  +++      + Q+   + ++M E G+  + 
Sbjct: 366 GRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSD 425

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             +  L+  Y  + Q ++  + +  +E+   +P
Sbjct: 426 ACHAGLIHSYANSGQFFQLRKYIDELEKSAKQP 458



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/419 (21%), Positives = 200/419 (47%), Gaps = 2/419 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA  +   L+ +G  P   TY TL++A  R +R++  L   +++ K    P+ + +
Sbjct: 229 GLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTY 288

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I+       +D+ MK+F+ M++  C P   T+N+L+K +GN G   E   + + M +
Sbjct: 289 NILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKR 348

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                P   T+NIL+  +     ++ + ++   ++ +G+QP   T+  L  + A+ G   
Sbjct: 349 -AGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQ 407

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP-NLVVFNSL 246
           + E++  EM    ++ ++     ++  Y   G      +++  +++    P + ++  + 
Sbjct: 408 QCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTF 467

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +  +      +    AL  + + G  PD+  F+ ++   +  G + +  ++ +++ KA +
Sbjct: 468 VLAYCKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQL 527

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           +PD   ++ L   Y R G   KAE +++ MR+ G  PN++ + T++  +    +M  A  
Sbjct: 528 KPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAAR 587

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           ++  M    + P+  T+ TL+  Y        A  +++ M E G +P + T + + D +
Sbjct: 588 VFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGY 646



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/440 (24%), Positives = 199/440 (45%), Gaps = 3/440 (0%)

Query: 6   GKGKPH-EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           GKG  H EA  +   +   G  P ++TY  L+AA  R        +L   +   G+ PD 
Sbjct: 191 GKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDE 250

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
             +  +I+A + +   ++A++ F +M+ + C P   TYN LI  YG + K ++ +K+ + 
Sbjct: 251 FTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKF 310

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M Q+KN  P+  T+N L++++ +   + E  NV  +M  +G  P   T+N L   Y + G
Sbjct: 311 M-QEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCG 369

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
               +  +   +    ++P   T   +++   +EG  +   +    M E  +  +     
Sbjct: 370 YVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHA 429

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKP-DVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            LI  + +      + K +  +E+   +P   +   T + A+    +  + Q   + +  
Sbjct: 430 GLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQLALNQLYD 489

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G  PDI VF+ +     + G  ++A  +L  +RK  + P+ V +  ++S +       +
Sbjct: 490 NGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHK 549

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  +  +M   G  PNL TY TLL+ Y +  +   A  +   M    VRP   T   +  
Sbjct: 550 AEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVG 609

Query: 424 SWRAIGLAREAKRVLKSAEE 443
           S+ ++GL +EA  V++   E
Sbjct: 610 SYSSLGLYKEALSVIEYMTE 629



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 56/109 (51%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M++   +G  H+A  + + +   G  P LITY TL+ + T+  R      +   +    +
Sbjct: 538 MSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARV 597

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY 109
           +PD+  FN ++ + S  G   EA+ + + M + GC+PT  T+  L+ GY
Sbjct: 598 RPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGY 646


>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 695

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 209/425 (49%), Gaps = 3/425 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKS--ILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++G+    + Y+ ++ +L R  R  S  +  L S+++ D ++ D  L N +I   +++G+
Sbjct: 212 QDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAKAGD 271

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
            ++AM+    ++ SG  P T+T   +I   G+ G+  E+  + + M +D  +KP  R YN
Sbjct: 272 PNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEM-KDNGLKPKTRAYN 330

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L++ +     +++A  +V +M  SG+ PD  TY+ L  AY+  G    A  +L EM+ N
Sbjct: 331 GLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEAN 390

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            + PN      I++ Y   G  + + + L  MK   V P+   +N +I  F      D  
Sbjct: 391 NIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHA 450

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
                 M   G++PD VT++T++D    A L  + +E+F++M++ G  P +  F+I+   
Sbjct: 451 MDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINS 510

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           +         ++++ +MR  G+ PNVV +TT+I  +  + +   A+   E M   G+ P+
Sbjct: 511 FGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPS 570

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
              Y  L+  Y +     +A    ++M    ++P    +  + +++       EA  VLK
Sbjct: 571 STMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLK 630

Query: 440 SAEED 444
             +E+
Sbjct: 631 YMKEN 635



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 188/365 (51%), Gaps = 1/365 (0%)

Query: 49  LSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
           +  +  V+  G+ P +    A+I+A  +SG + EA  IF++MKD+G KP T  YN L+KG
Sbjct: 276 MEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKG 335

Query: 109 YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP 168
           Y   G  +++  ++  M +   V P++ TY++L+ A+ +    E A  V+ +M A+ I P
Sbjct: 336 YVKAGMLKDAEFIVSEMER-SGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMP 394

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           ++  ++ +  +Y   GE  ++ Q+L EM+N+ VRP+     +++  + K   ++ AM   
Sbjct: 395 NSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTF 454

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
            +M    + P+ V +N+LI      +  +  ++    M E G  P V TF+ +++++   
Sbjct: 455 DKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQ 514

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
                 + +  +M   G+ P++  ++ L   Y ++G    A   L  M+  G+ P+  M+
Sbjct: 515 ERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMY 574

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
             +I+ +      ++A++ +  M    + P+L    +L+  +GE ++   A  +L+ M+E
Sbjct: 575 NALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKE 634

Query: 409 KGVRP 413
             ++P
Sbjct: 635 NDLKP 639



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 190/389 (48%), Gaps = 4/389 (1%)

Query: 2   NILVG---KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           +I+VG    G P++A      +   G  P   T   +++AL    R     ++  +++ +
Sbjct: 261 DIIVGFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDN 320

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+KP +  +N ++    ++G + +A  I  +M+ SG  P   TY+ LI  Y N G+ E +
Sbjct: 321 GLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESA 380

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
             +L+ M  + N+ PN   ++ ++ ++  +   ++++ V+ +M  SG++PD   YN +  
Sbjct: 381 RIVLKEMEAN-NIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMID 439

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            + ++     A     +M +  ++P+  T   ++  +CK    E A      M E    P
Sbjct: 440 TFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSP 499

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
            +  FN +I  F + +  D V   +  M   G+ P+VVT++T++D +  +G      E  
Sbjct: 500 CVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECL 559

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           +DM  AG++P   +++ L   Y + G  ++A +    MR   + P+++   ++I+ +   
Sbjct: 560 EDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSLINAFGED 619

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            +   A S+ + M E  + P++ TY TL+
Sbjct: 620 RRDAEAFSVLKYMKENDLKPDVVTYTTLM 648



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 192/384 (50%), Gaps = 11/384 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  IF  + + G +P    Y  L+    +    K    ++S++E+ G+ PD   +
Sbjct: 305 GRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTY 364

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +I+A S +G  + A  + ++M+ +   P +  ++ ++  Y + G+ ++S ++L+ M +
Sbjct: 365 SLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEM-K 423

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  V+P+   YN+++  +   + ++ A +   KM++ GIQPD VT+NTL   + +     
Sbjct: 424 NSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHE 483

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           RAE++  EM      P   T  I+++ + ++   +D    +  M+ L + PN+V + +LI
Sbjct: 484 RAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLI 543

Query: 248 KGFLDI-----KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
               DI     + SD ++  L  M+  G+KP    ++ +++A++  GL  +    F  M 
Sbjct: 544 ----DIYGKSGRFSDAIE-CLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMR 598

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
              ++P +   + L   +       +A S+L  M++  + P+VV +TT++       K  
Sbjct: 599 ADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFN 658

Query: 363 RAMSIYEKMCEIGINPNLKTYETL 386
           +  S+YE+M   G  P+ K    L
Sbjct: 659 KVPSVYEEMILAGCTPDRKARAML 682


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 191/385 (49%), Gaps = 8/385 (2%)

Query: 10  PHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNA 69
           P  +  +F  LIE    P   T+  LV     +      L+ +S ++  G+ PD++ +N 
Sbjct: 189 PQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNT 248

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK 129
           ++NA    G + EA  +  +MK  G  PT  TYNTL+  +  +G  +++ K+++ M+   
Sbjct: 249 LLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTA-Y 307

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ-PDAVTYNTLARAYAQYGETYR 188
             +P+ RTYN+L    C    ++EA+ +  +M   G   PD VTYNTL  A  ++  +  
Sbjct: 308 GFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSD 367

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A ++L EM++  V+P   T  I+V   CKEG +E+A+  L ++ E  + P+++ +N+LI 
Sbjct: 368 ALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427

Query: 249 GFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
            +     +  V KA TLM+E    G+K D  T +T++            +E+     + G
Sbjct: 428 AYC---KAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRG 484

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
             PD   +  +   Y +   P+ A  +   M +  + P++  + T+I G C   +++ A+
Sbjct: 485 FVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAI 544

Query: 366 SIYEKMCEIGINPNLKTYETLLWGY 390
               +  E G+ P+  TY  ++  Y
Sbjct: 545 DKLNEFVEKGLVPDETTYNIIIHAY 569



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 207/447 (46%), Gaps = 39/447 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    KG   EA  +   +  +G  PT  TY TLV+A  R    K    ++  +   G 
Sbjct: 250 LNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGF 309

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCK-PTTSTYNTLIKGYGNVGKPEESL 119
           +PD   +N +     ++G VDEA ++  +M+  G   P   TYNTL+          ++L
Sbjct: 310 EPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDAL 369

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +LL+ M +DK VKP   T+NI+V++ C +  +EEA   + K+   G+ PD +TYNTL  A
Sbjct: 370 RLLEEM-RDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDA 428

Query: 180 YAQYGETYRAEQMLFEMQNNQVR-----------------------------------PN 204
           Y + G   +A  ++ EM    ++                                   P+
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD-SDGVDKAL 263
           E + G +++ Y KE N E A+R   +M E ++ P++  +N+LIKG   ++   + +DK  
Sbjct: 489 EVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLN 548

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             +E+ G+ PD  T++ I+ A+   G +       + MV+   +PD+   + L  G    
Sbjct: 549 EFVEK-GLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLH 607

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+  KA  +  S  + G   +V+ + T+I   C    +  A+  ++ M   G+ P+  TY
Sbjct: 608 GKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTY 667

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKG 410
             +L    EA +   A  +L  + + G
Sbjct: 668 NVVLSALSEAGRSEEAHNMLHKLADSG 694



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 175/387 (45%), Gaps = 2/387 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA      + EEG  P +ITY TL+ A  +        +L+ ++   G+K D
Sbjct: 394 LCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMD 453

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +   N ++    +    ++A ++       G  P   +Y T++  Y     PE +L+L  
Sbjct: 454 TFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWD 513

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + K + P+  TYN L++  C    ++EA + + + V  G+ PD  TYN +  AY + 
Sbjct: 514 QMIERKLI-PSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKE 572

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A +   +M  N  +P+  TC  +++G C  G ++ A++      E     +++ +
Sbjct: 573 GDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITY 632

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+LI+    + D D        ME  G++PD  T++ ++ A S AG   +   +   +  
Sbjct: 633 NTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLAD 692

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV-MFTTVISGWCNAVKMQ 362
           +G         +L        + ++ E    +        N +  +   ++G C   +++
Sbjct: 693 SGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLK 752

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWG 389
            A ++ ++M + G+  +  TY TL+ G
Sbjct: 753 EAKAVLDEMMQKGMPVDCSTYITLMEG 779



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 163/360 (45%), Gaps = 44/360 (12%)

Query: 97  PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN---------------------- 134
           PT+   +  +  Y  +  P  + +LL  + + + V+P+                      
Sbjct: 133 PTSPLADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQAS 192

Query: 135 ---------------DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
                            T+N+LV   CSK ++ +A   +  M   G+ PDAVTYNTL  A
Sbjct: 193 LDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNA 252

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + + G    A  +L  M+ + + P + T   +VS + + G ++ A + +  M      P+
Sbjct: 253 HCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPD 312

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVK-PDVVTFSTIMDAWSSAGLMGKCQ 295
           L  +N L  G      +  VD+A  L   ME  G   PDVVT++T++DA           
Sbjct: 313 LRTYNVLAMGLC---QAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDAL 369

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
            + ++M   G++P +   +I+ K   + G+ ++A   L  + + G+ P+V+ + T+I  +
Sbjct: 370 RLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAY 429

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C A  + +A ++ ++M   G+  +  T  T+L+   + K+   AEELL    ++G  P +
Sbjct: 430 CKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDE 489



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 16/184 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L   GK  +A  +F   +E+G +  +ITY TL+ ++ +     + L     +E  G+
Sbjct: 601 MNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGL 660

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG--------NV 112
           +PD+  +N +++A SE+G  +EA  +  K+ DSG K + S    L+K           + 
Sbjct: 661 QPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG-KLSQSFACPLLKPSSADEADVKEHE 719

Query: 113 GKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT 172
           GKPE         S +K       TY   +   C+   ++EA  V+ +M+  G+  D  T
Sbjct: 720 GKPEAE-------SSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCST 772

Query: 173 YNTL 176
           Y TL
Sbjct: 773 YITL 776


>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
           thaliana]
          Length = 949

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 192/385 (49%), Gaps = 4/385 (1%)

Query: 50  SLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY 109
           +L+ ++E++G+     +++ M++  +   +  + + +F+++K+ G  PT  TY  LI  Y
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 494

Query: 110 GNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
             VGK  ++L++ ++M +++ VK N +TY++++  +        A+ V   MV  G++PD
Sbjct: 495 TKVGKISKALEVSRVM-KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 553

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
            + YN +  A+   G   RA Q + EMQ  + RP  RT   I+ GY K G+M  ++    
Sbjct: 554 VILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFD 613

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            M+     P +  FN LI G ++ + +  +   +TL    GV  +  T++ IM  ++S G
Sbjct: 614 MMRRCGCVPTVHTFNGLINGLVEKRQAVEILDEMTLA---GVSANEHTYTKIMQGYASVG 670

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
             GK  E F  +   G++ DI  +  L K   ++G  Q A ++   M    +  N  ++ 
Sbjct: 671 DTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYN 730

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
            +I GW     +  A  + ++M + G+ P++ TY + +    +A    RA + ++ ME  
Sbjct: 731 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 790

Query: 410 GVRPKKSTIQLVADSWRAIGLAREA 434
           GV+P   T   +   W    L  +A
Sbjct: 791 GVKPNIKTYTTLIKGWARASLPEKA 815



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 196/388 (50%), Gaps = 10/388 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+    GK  +A  +   + EEG +  L TY+ ++    + K + +  ++   + K+GM
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD IL+N +I+A    GN+D A++  ++M+    +PTT T+  +I GY   G    SL+
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +  +M +   V P   T+N L+     K    +A  ++ +M  +G+  +  TY  + + Y
Sbjct: 611 VFDMMRRCGCV-PTVHTFNGLINGLVEKR---QAVEILDEMTLAGVSANEHTYTKIMQGY 666

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A  G+T +A +    +QN  +  +  T   ++   CK G M+ A+     M    +  N 
Sbjct: 667 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 726

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            V+N LI G+    D       +  M++ GVKPD+ T+++ + A S AG M +  +  ++
Sbjct: 727 FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 786

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G++P+I  ++ L KG+ RA  P+KA S    M+  G+ P+  ++  +++   +   
Sbjct: 787 MEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRAS 846

Query: 361 MQRA------MSIYEKMCEIGINPNLKT 382
           +  A      M+I ++M E G+  ++ T
Sbjct: 847 IAEAYIYSGVMTICKEMVEAGLIVDMGT 874



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/523 (23%), Positives = 222/523 (42%), Gaps = 109/523 (20%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  H A   F  +   G  PT   YT+L+ A    +     LS + K++++G++   + 
Sbjct: 322 RGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVT 381

Query: 67  FNAMINACSESGNV-------DEAMKIFQ----------------------------KMK 91
           ++ ++   S++G+        DEA +I +                            +M+
Sbjct: 382 YSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREME 441

Query: 92  DSGCKPTTSTYNTLIKG-----------------------------------YGNVGKPE 116
           + G     + Y+T++ G                                   Y  VGK  
Sbjct: 442 EEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKIS 501

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           ++L++ ++M +++ VK N +TY++++  +        A+ V   MV  G++PD + YN +
Sbjct: 502 KALEVSRVM-KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNI 560

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
             A+   G   RA Q + EMQ  + RP  RT   I+ GY K G+M  ++     M+    
Sbjct: 561 ISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGC 620

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P +  FN LI G ++ + +  +   +TL    GV  +  T++ IM  ++S G  GK  E
Sbjct: 621 VPTVHTFNGLINGLVEKRQAVEILDEMTLA---GVSANEHTYTKIMQGYASVGDTGKAFE 677

Query: 297 IFDDMVKAGIEPDI-----------------------------------HVFSILAKGYV 321
            F  +   G++ DI                                    V++IL  G+ 
Sbjct: 678 YFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA 737

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           R G+  +A  ++  M+K GV P++  +T+ IS    A  M RA    E+M  +G+ PN+K
Sbjct: 738 RRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIK 797

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           TY TL+ G+  A  P +A    + M+  G++P K+    +  S
Sbjct: 798 TYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTS 840



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 179/393 (45%), Gaps = 8/393 (2%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
            E+  +P+   +  +V    R+           ++   G+ P S ++ ++I+A +   ++
Sbjct: 301 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDM 360

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP--NDRTY 138
           DEA+   +KMK+ G + +  TY+ ++ G+   G  E +        + K +    N   Y
Sbjct: 361 DEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFD---EAKRIHKTLNASIY 417

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
             ++ A C   ++E A  +V +M   GI      Y+T+   Y    +  +   +   ++ 
Sbjct: 418 GKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKE 477

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
               P   T G +++ Y K G +  A+     MKE  V  NL  ++ +I GF+ +KD   
Sbjct: 478 CGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWAN 537

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
                  M + G+KPDV+ ++ I+ A+   G M +  +   +M K    P    F  +  
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIH 597

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           GY ++G+ +++  +   MR+ G  P V  F  +I+G    V+ ++A+ I ++M   G++ 
Sbjct: 598 GYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGL---VEKRQAVEILDEMTLAGVSA 654

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           N  TY  ++ GY       +A E    ++ +G+
Sbjct: 655 NEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 687



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 157/323 (48%), Gaps = 1/323 (0%)

Query: 96  KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
           KP+ + +  ++K YG  G    + +  + M + + + P  R Y  L+ A+     ++EA 
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERM-RARGITPTSRIYTSLIHAYAVGRDMDEAL 364

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
           + V KM   GI+   VTY+ +   +++ G    A+    E +      N    G I+  +
Sbjct: 365 SCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAH 424

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C+  NME A   +  M+E  +   + ++++++ G+  + D          ++E G  P V
Sbjct: 425 CQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTV 484

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           VT+  +++ ++  G + K  E+   M + G++ ++  +S++  G+V+  +   A ++   
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M K G+ P+V+++  +IS +C    M RA+   ++M ++   P  +T+  ++ GY ++  
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604

Query: 396 PWRAEELLQVMEEKGVRPKKSTI 418
             R+ E+  +M   G  P   T 
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTF 627



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 52/259 (20%), Positives = 116/259 (44%)

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
           W  V        +P    +  + + Y + G+ +RA +    M+   + P  R    ++  
Sbjct: 294 WQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHA 353

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           Y    +M++A+  + +MKE  +  +LV ++ ++ GF     ++  D      +      +
Sbjct: 354 YAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLN 413

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
              +  I+ A      M + + +  +M + GI+  I ++  +  GY    + +K   +  
Sbjct: 414 ASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFK 473

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            +++ G  P VV +  +I+ +    K+ +A+ +   M E G+  NLKTY  ++ G+ + K
Sbjct: 474 RLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLK 533

Query: 395 QPWRAEELLQVMEEKGVRP 413
               A  + + M ++G++P
Sbjct: 534 DWANAFAVFEDMVKEGMKP 552



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/268 (20%), Positives = 110/268 (41%), Gaps = 41/268 (15%)

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           +L R     G+ ++A    FE  +   +P+    G++V  Y + G+M  A     RM+  
Sbjct: 282 SLQRILDTNGDNWQAVISAFEKIS---KPSRTEFGLMVKFYGRRGDMHRARETFERMRAR 338

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            + P   ++ SLI  +   +D   +D+AL+ + +                          
Sbjct: 339 GITPTSRIYTSLIHAYAVGRD---MDEALSCVRK-------------------------- 369

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
                 M + GIE  +  +S++  G+ +AG  + A+      ++     N  ++  +I  
Sbjct: 370 ------MKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYA 423

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C    M+RA ++  +M E GI+  +  Y T++ GY       +   + + ++E G  P 
Sbjct: 424 HCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPT 483

Query: 415 KSTIQLVADSWRAIG---LAREAKRVLK 439
             T   + + +  +G    A E  RV+K
Sbjct: 484 VVTYGCLINLYTKVGKISKALEVSRVMK 511



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 78/172 (45%)

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           KP    F  ++  +   G M + +E F+ M   GI P   +++ L   Y    +  +A S
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
            +  M++ G+  ++V ++ ++ G+  A   + A   +++   I    N   Y  +++ + 
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           +     RAE L++ MEE+G+    +    + D +  +   ++   V K  +E
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKE 477


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 198/398 (49%), Gaps = 11/398 (2%)

Query: 20  LIEEGHR----PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           L+EE  R    P ++T+ TL++ L R   F+ +  +++++ + G  PD  ++  +I+   
Sbjct: 249 LMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGIC 308

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G+++ A +I  +M   G KP    YNTL+KG  +  + EE+ +LL  M  DK+   +D
Sbjct: 309 KEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMF-DKDCPLDD 367

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            T+NILV  +C    ++    ++ +M+  G  PD +TY T+   + + G    A  +L  
Sbjct: 368 VTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 427

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M     +PN  +  I++ G C      DA   + +M +     N + FN+LI  FL  K 
Sbjct: 428 MTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLIN-FLCKKG 486

Query: 256 SDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
              V++A+ L+++    G  PD++++ST++D    AG   +  E+ + MV  G+ P+  +
Sbjct: 487 L--VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTII 544

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           +S +A    R G   K   +  +++   +  + V++  VIS  C   + +RA+     M 
Sbjct: 545 YSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMV 604

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
             G  PN  TY  L+ G         A+E+L  +  KG
Sbjct: 605 SSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 207/444 (46%), Gaps = 41/444 (9%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   TY  +V AL  + R    L+++ ++ + G  P   +++ ++ A    G    A+++
Sbjct: 120 PNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRV 179

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            + +   GC       N ++    + G  +E+L LL+ +      +P+  +YN +++  C
Sbjct: 180 LEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPS-FGCEPDVVSYNAVLKGLC 238

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                     ++ +MV     P+ VT+NTL     + G   R  ++L +M  +   P+ R
Sbjct: 239 MAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIR 298

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL-------------DI 253
               I+ G CKEG++E A   L RM    + PN+V +N+L+KG               ++
Sbjct: 299 MYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 358

Query: 254 KDSDG-------------------VDKALTLME---EFGVKPDVVTFSTIMDAWSSAGLM 291
            D D                    VD+ + L+E   E G  PDV+T++T+++ +   GL+
Sbjct: 359 FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLI 418

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            +   +   M   G +P+   ++I+ KG   A     AE +++ M + G   N + F T+
Sbjct: 419 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 478

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I+  C    +++A+ + ++M   G +P+L +Y T++ G G+A +   A ELL VM  KG+
Sbjct: 479 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 538

Query: 412 RPKKSTIQLVADSWRAIGLAREAK 435
            P       +A +     L+RE +
Sbjct: 539 SPNTIIYSSIASA-----LSREGR 557



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/438 (23%), Positives = 206/438 (47%), Gaps = 1/438 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  +G   EA ++   L   G  P +++Y  ++  L   KR+  +  L+ ++ +   
Sbjct: 199 LNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMAC 258

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + FN +I+    +G  +   ++  +M + GC P    Y T+I G    G  E + +
Sbjct: 259 PPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHE 318

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M     +KPN   YN L++  CS    EE   ++ +M       D VT+N L   +
Sbjct: 319 ILNRMPS-YGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFF 377

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G   R  ++L +M      P+  T   +++G+CKEG +++A+  L  M      PN 
Sbjct: 378 CQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNT 437

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +  ++KG    +     +  ++ M + G   + +TF+T+++     GL+ +  E+   
Sbjct: 438 ISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQ 497

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  G  PD+  +S +  G  +AG+  +A  +L  M   G+ PN ++++++ S      +
Sbjct: 498 MLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGR 557

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           + + + +++ + +  I  +   Y  ++    +  +  RA E L  M   G  P +ST  +
Sbjct: 558 INKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTI 617

Query: 421 VADSWRAIGLAREAKRVL 438
           +     + G  +EA+ +L
Sbjct: 618 LIRGLASEGFVKEAQEML 635



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 163/339 (48%), Gaps = 4/339 (1%)

Query: 102 YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
           YN ++ GY   G+ E + +L   +     V PN  TY  +VRA C++  I +A  V+ +M
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP----VPPNAYTYFPVVRALCARGRIADALAVLDEM 148

Query: 162 VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM 221
              G  P    Y+ +  A  + G    A ++L ++       +   C ++++  C +G++
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 208

Query: 222 EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
           ++A+  L  +      P++V +N+++KG    K    V + +  M      P++VTF+T+
Sbjct: 209 DEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 268

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +      GL  +  E+   MV+ G  PDI +++ +  G  + G  + A  IL  M  YG+
Sbjct: 269 ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGL 328

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
            PNVV + T++ G C+A + +    +  +M +     +  T+  L+  + +     R  E
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 388

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
           LL+ M E+G  P   T   V + +   GL  EA  +LKS
Sbjct: 389 LLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 427



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/408 (22%), Positives = 189/408 (46%), Gaps = 4/408 (0%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           Y  +VA   R  + +S   L + V    + P++  +  ++ A    G + +A+ +  +M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
             GC P    Y+ +++     G    ++++L+ +   +    +    N+++ A C + S+
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDL-HARGCALDVGNCNLVLNAICDQGSV 208

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           +EA +++  + + G +PD V+YN + +           ++++ EM      PN  T   +
Sbjct: 209 DEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 268

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           +S  C+ G  E     L +M E    P++ ++ ++I G       +   + L  M  +G+
Sbjct: 269 ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGL 328

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           KP+VV ++T++    SA    + +E+  +M       D   F+IL   + + G   +   
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 388

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +L  M + G  P+V+ +TTVI+G+C    +  A+ + + M   G  PN  +Y  +L G  
Sbjct: 389 LLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 448

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            A++   AE+L+  M ++G      T   + +     GL  +A  +LK
Sbjct: 449 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLK 496



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 144/320 (45%), Gaps = 18/320 (5%)

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           YN +V  +C    +E A  +     A  + P+A TY  + RA    G    A  +L EM 
Sbjct: 93  YNAMVAGYCRAGQLESARRLA---AAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFL----YRMKELEVHPNLVVFNSLIKGFLDI 253
                P      +I+   C+ G    A+R L     R   L+V    +V N+       I
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNA-------I 202

Query: 254 KDSDGVDKALTLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
            D   VD+AL L+ +   FG +PDVV+++ ++     A   G  QE+ ++MV+    P+I
Sbjct: 203 CDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNI 262

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             F+ L     R G  ++   +L  M ++G  P++ M+ T+I G C    ++ A  I  +
Sbjct: 263 VTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNR 322

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M   G+ PN+  Y TLL G   A++    EELL  M +K       T  ++ D +   GL
Sbjct: 323 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGL 382

Query: 431 AREAKRVLKSAEEDRQSMPN 450
                 +L+   E R  MP+
Sbjct: 383 VDRVIELLEQMLE-RGCMPD 401


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 131/511 (25%), Positives = 237/511 (46%), Gaps = 16/511 (3%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           F  +++ G      +Y  L+  L         L     +EK G++PD + +N +      
Sbjct: 294 FCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLL 353

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
            G +  A K+ QKM   G  P   TY TLI G+  +G  EE+LKL Q  +  +  K N  
Sbjct: 354 LGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQ-ETLSRGFKLNVI 412

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
            YN+L+   C    IEEA  +  +M    ++PD + Y+ L     + G   RA Q+  +M
Sbjct: 413 FYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQM 472

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
           +  +  P+      ++ G  K GN+ +A  +      +++  ++V++N +I G++ +   
Sbjct: 473 RLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRL--- 529

Query: 257 DGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
           DG+ +A+ L   M E G+ P VVTF+T+++ +   G + + +++ + +   G+ P +  +
Sbjct: 530 DGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTY 589

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           + L   Y   G  Q+    L  M    V P  V +T +I G C   KM  ++ + E M  
Sbjct: 590 TTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYA 649

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
            G+ P+  TY T++  + + K+  +A +L  +M      P + T +++ ++    G  ++
Sbjct: 650 KGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKD 709

Query: 434 AKRVLKSAEEDRQSMPNKKDEIAVESIH-RKQNLSASNSTFLQI--PGVVSSEHNGSSAA 490
             R++ S  EDR     K   + +   H  K  +S +   F Q+   G V S  + S+  
Sbjct: 710 VDRMVVSI-EDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSA-- 766

Query: 491 KIRSQIVLRSDTVWTATKSLFVNTYGSGVQP 521
            + +++  R   + T  K  FV     GV P
Sbjct: 767 -VINRLCKRG--LITEAKYFFVMMLSEGVTP 794



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 119/525 (22%), Positives = 219/525 (41%), Gaps = 94/525 (17%)

Query: 9   KPHEAHYIFNCLIEE-GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD-GMKPDSIL 66
           KP  A   F  LI E G R ++ +   +   L  + RFK + S+I  +  D G+   SI+
Sbjct: 96  KPDVAVAFFYFLINEYGFRHSIFSQFVVSHILAGKGRFKELDSVIKNLIVDQGLGSASII 155

Query: 67  FNAMIN-----------------ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY 109
            + ++                  A S    + +A+ +  KMKD   + +  TYN+L+   
Sbjct: 156 CDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNM 215

Query: 110 GNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
            +     +    +++         ++ T +IL+   C ++ +E+A + ++      + P 
Sbjct: 216 RHTDIMWDVYNEIKV----SGAPQSECTTSILIHGLCEQSKLEDAISFLHD-SNKVVGPS 270

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
            V+ NT+   + + G    A      M  N +  +  +  I++ G C  G+M++A+ F  
Sbjct: 271 IVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTD 330

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            M++  V P++V +N+L KGFL +    G  K +  M   G+ PD+VT++T++      G
Sbjct: 331 DMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMG 390

Query: 290 --------------------------------LMGKCQE---IFDDMVKAGIEPDIHVFS 314
                                            +G+ +E   +FD+M    +EPD  V+S
Sbjct: 391 NIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYS 450

Query: 315 ILAKGYVRAGEPQKAESILTSM---RKYGVH----------------------------- 342
           IL  G  + G  Q+A  +   M   RK+  H                             
Sbjct: 451 ILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRM 510

Query: 343 ---PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
               +VV++  +I G+     +  AM +Y KM E GI P++ T+ TL+ G+        A
Sbjct: 511 DLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEA 570

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
            ++L+V+  KG+ P   T   + +++  +G  +E    L   E +
Sbjct: 571 RKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEAN 615



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 150/340 (44%), Gaps = 7/340 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA   F+          ++ Y  ++    R       + L  K+ + G+ P 
Sbjct: 491 LFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPS 550

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + FN +IN     G++ EA K+ + ++  G  P+  TY TL+  Y  VG  +E    L 
Sbjct: 551 VVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLH 610

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  +  V P   TY +L++  C +N + E+  ++  M A G+ PD+VTYNT+ + + + 
Sbjct: 611 EMEANA-VVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKG 669

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E  +A Q+   M  +   P + T  ++++  C  G+++D  R +  +++  +      +
Sbjct: 670 KEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTY 729

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT---FSTIMDAWSSAGLMGKCQEIFDD 300
            ++IK          V KAL    +   K  V++   +S +++     GL+ + +  F  
Sbjct: 730 MTIIKAHC---AKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVM 786

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           M+  G+ PD  +   +   + + G        L  + K G
Sbjct: 787 MLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSG 826



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 144/297 (48%), Gaps = 3/297 (1%)

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +  D +L+N MI+       + EAM+++ KM + G  P+  T+NTLI G+   G   E+ 
Sbjct: 512 LMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEAR 571

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K+L+++ + K + P+  TY  L+ A+C   +++E ++ +++M A+ + P  VTY  L + 
Sbjct: 572 KMLEVI-RLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKG 630

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHP 238
             +  + + + Q+L  M    + P+  T   I+  +CK   +  A++ LY M  L    P
Sbjct: 631 LCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQ-LYNMMLLHNCDP 689

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
             V +  LI       D   VD+ +  +E+  +     T+ TI+ A  + G + K    F
Sbjct: 690 TQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYF 749

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           + M+  G    I  +S +     + G   +A+     M   GV P+  +  TV++ +
Sbjct: 750 NQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAF 806



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/425 (20%), Positives = 173/425 (40%), Gaps = 36/425 (8%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA-CSE--- 76
           +  G +  +I Y  L++ L +  R +  L+L  ++E   ++PD I+++ +I+  C E   
Sbjct: 403 LSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFV 462

Query: 77  -------------------------------SGNVDEAMKIFQKMKDSGCKPTTSTYNTL 105
                                          +GN+ EA   F              YN +
Sbjct: 463 QRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIM 522

Query: 106 IKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
           I GY  +    E+++L   M + + + P+  T+N L+  +C +  + EA  ++  +   G
Sbjct: 523 IDGYVRLDGIAEAMQLYYKMIE-RGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKG 581

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           + P  VTY TL  AY + G        L EM+ N V P   T  +++ G C++  M +++
Sbjct: 582 LVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESL 641

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           + L  M    + P+ V +N++I+ F   K+     +   +M      P  VT+  +++A 
Sbjct: 642 QLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINAL 701

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
              G +     +   +    I      +  + K +   G+  KA      M   G   ++
Sbjct: 702 CIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISI 761

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
             ++ VI+  C    +  A   +  M   G+ P+ +  +T+L  + +        E L +
Sbjct: 762 RDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAM 821

Query: 406 MEEKG 410
           + + G
Sbjct: 822 VVKSG 826



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 99/443 (22%), Positives = 190/443 (42%), Gaps = 25/443 (5%)

Query: 45  FKSILSLISKVEKDG-------MKPDSI--LFNAMINACSESGNVDEAMKIFQKMKDSG- 94
           F++++S +S+   DG       +KPD     F  +IN      ++     +   +   G 
Sbjct: 73  FRTVVSTLSETVVDGVLDRLRTLKPDVAVAFFYFLINEYGFRHSIFSQFVVSHILAGKGR 132

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
            K   S    LI   G +G       LL  + + +N   N   +++L  A+     I +A
Sbjct: 133 FKELDSVIKNLIVDQG-LGSASIICDLL--LEKFRNWDSNGLVWDMLAFAYSRHEMIHDA 189

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN----NQVRPNERTCGI 210
             V+ KM     Q    TYN+L           R   +++++ N    +    +E T  I
Sbjct: 190 LFVIAKMKDLNFQASVPTYNSLL-------HNMRHTDIMWDVYNEIKVSGAPQSECTTSI 242

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++ G C++  +EDA+ FL+   ++ V P++V  N+++  F  +   D       LM + G
Sbjct: 243 LIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNG 301

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           +  D  +++ ++     AG M +     DDM K G+EPD+  ++ LAKG++  G    A 
Sbjct: 302 LLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGAR 361

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            ++  M   G++P++V +TT+I G C    ++ A+ + ++    G   N+  Y  LL   
Sbjct: 362 KVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCL 421

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            +  +   A  L   ME   + P      ++       G  + A ++ +     R+   +
Sbjct: 422 CKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHH 481

Query: 451 KKDEIAVESIHRKQNLSASNSTF 473
                 +  + +  N+S + + F
Sbjct: 482 FAQRAVLLGLFKNGNISEARNYF 504


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 214/437 (48%), Gaps = 7/437 (1%)

Query: 8   GKPHEAHYIFNCLIEEGH---RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           G   +A  +   +  E H   RP  ++YT ++  L   +R    ++L+  ++  G++ D 
Sbjct: 91  GDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADV 150

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           + +  +I    ++  +D A+++  +M  SG  P    Y+ L++GY   G+ ++  K+ + 
Sbjct: 151 VTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEE 210

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           MS+   V+P+   +   +   C K  I +A  V   MV  G++P+ VTYN L     + G
Sbjct: 211 MSR-LGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEG 269

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE--VHPNLVV 242
               A  +  EM +  V P+  T   +++G      M+ AM  L  M + +  V P++V 
Sbjct: 270 SVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVT 329

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           FNS+I G   I           +M E G   ++VT++ ++  +     +     +  +++
Sbjct: 330 FNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELI 389

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
            +G+EPD   +SIL  G+ +  E  +AE  L +M + G+   +  +  +++  C    M+
Sbjct: 390 SSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMME 449

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
           +AM ++ +M ++    +   Y T+++G  ++     A++LLQ M ++G+ P   T  ++ 
Sbjct: 450 QAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILI 508

Query: 423 DSWRAIGLAREAKRVLK 439
           + +  +G   EA+RVLK
Sbjct: 509 NMFAKLGDLEEAERVLK 525



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 181/367 (49%), Gaps = 6/367 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +   +F  +   G  P +I +T  +  L ++ R    + +   + + G++P+ + +
Sbjct: 199 GRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTY 258

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +IN   + G+V EA+ +  +M D G  P   TYNTLI G   V + + ++ LL+ M Q
Sbjct: 259 NVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQ 318

Query: 128 -DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            D  V+P+  T+N ++   C    + +A +V   M   G   + VTYN L   + +  + 
Sbjct: 319 GDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKV 378

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A  ++ E+ ++ + P+  T  I+++G+ K   ++ A  FL  M +  +   L  +  L
Sbjct: 379 NMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPL 438

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKP--DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +     +     +++A+ L  E  +    D V +ST+M     +G +   +++  DM+  
Sbjct: 439 LAALCQLG---MMEQAMVLFNEMDMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDE 495

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+ PD   +SIL   + + G+ ++AE +L  M   G  P+V +F ++I G+    ++ + 
Sbjct: 496 GLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKI 555

Query: 365 MSIYEKM 371
           + +  +M
Sbjct: 556 LDLIHEM 562



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 175/365 (47%), Gaps = 14/365 (3%)

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKP-EESLKLLQLMSQ 127
           A++N    +  V EA  +   + D        +YN ++      G    ++L LL  MS+
Sbjct: 49  ALLNRRLRAAPVTEACSLLSALPDV---RDAVSYNIVLAALCRRGGDLRQALSLLADMSR 105

Query: 128 DKN--VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           + +   +PN  +Y +++R  C+    +EA  ++  M ASG++ D VTY TL R      E
Sbjct: 106 EAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAE 165

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A ++L EM  + V PN      ++ GYC+ G  +D  +    M  L V P++++F  
Sbjct: 166 LDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTG 225

Query: 246 LIKGFLDIKDSDGVDKAL---TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
            I    D+     + KA+    +M + G++P+VVT++ +++     G + +   + ++M 
Sbjct: 226 FID---DLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMD 282

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG--VHPNVVMFTTVISGWCNAVK 360
             G+ PD+  ++ L  G     E   A  +L  M +    V P+VV F +VI G C   +
Sbjct: 283 DKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGR 342

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M++A+S+ E M E G   NL TY  L+ G+    +   A  L+  +   G+ P   T  +
Sbjct: 343 MRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSI 402

Query: 421 VADSW 425
           + + +
Sbjct: 403 LINGF 407



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/391 (23%), Positives = 185/391 (47%), Gaps = 6/391 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P +I Y+ L+    R  R++ +  +  ++ + G++PD I+F   I+   + G + +A
Sbjct: 180 GVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKA 239

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +K+   M   G +P   TYN LI      G   E+L L   M  DK V P+  TYN L+ 
Sbjct: 240 VKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEM-DDKGVAPDVVTYNTLIA 298

Query: 144 AWCSKNSIEEAWNVVYKMVASG--IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
                  ++ A  ++ +M+     ++PD VT+N++     + G   +A  +   M     
Sbjct: 299 GLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGC 358

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
             N  T   ++ G+ +   +  AM  +  +    + P+   ++ LI GF  + + D  + 
Sbjct: 359 MCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEM 418

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM-VKAGIEPDIHVFSILAKGY 320
            L  M + G++ ++  +  ++ A    G+M +   +F++M +  G+  D   +S +  G 
Sbjct: 419 FLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGL--DAVAYSTMMYGA 476

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            ++G+ + A+ +L  M   G+ P+ V ++ +I+ +     ++ A  + ++M   G  P++
Sbjct: 477 CKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDV 536

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
             +++L+ GY    Q  +  +L+  M  K V
Sbjct: 537 AVFDSLIKGYSAEGQINKILDLIHEMRAKNV 567


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 192/400 (48%), Gaps = 4/400 (1%)

Query: 25  HRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAM 84
           HRP+  +   L+A L   KR            +  + PD   FN +I+     G + +A 
Sbjct: 152 HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
            + + +K  G  P+ +TYN+LI GY   G  G       LL+ M +   + P   T+ +L
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVE-AGISPTAVTFGVL 270

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +  +C  ++   A  V  +M   GI    VTYN+L       G+     +++ EM++  +
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            PNE T G ++ G+CK+G M DA  ++  M E  V P++V++  LI G+  +   +    
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMA 390

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
               M + G+ P+V T++ ++  +S +G       + D+M + GIE D+  +++L     
Sbjct: 391 VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALC 450

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
             GE +KA  +L  M + G+ PN + + T+I G+C+   ++ A  I  +M +     N+ 
Sbjct: 451 CKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVV 510

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           TY   +  + +  +   A +LL  M +K + P   T + +
Sbjct: 511 TYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI 550



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 194/393 (49%), Gaps = 5/393 (1%)

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P +   NA++     +  VD A K F+        P   T+NT+I G   +G+  ++  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV---VYKMVASGIQPDAVTYNTLA 177
           + + + +   + P+  TYN L+  +C K      ++V   + +MV +GI P AVT+  L 
Sbjct: 213 VAKDI-KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
             Y +   T  A ++  EM+   +  +  T   ++SG C EG +E+ ++ +  M++L + 
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           PN + F  ++KGF         +  +  M E  V+PDVV ++ ++D +   G M     +
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAV 391

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            + M K GI P++  ++ L  G+ R+G+ + A  +L  M++ G+  +VV +  +I   C 
Sbjct: 392 KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCC 451

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             ++++A+ + ++M E+G+ PN  TY T++ G+ +      A E+   ME+   R    T
Sbjct: 452 KGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVT 511

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
             +    +  IG   EA  +L     D+  +PN
Sbjct: 512 YNVFIKYFCQIGKMDEANDLLNEM-LDKCLVPN 543



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 187/392 (47%), Gaps = 4/392 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LVG  +   A   F   +     P + T+ T+++ L R  + +    +   ++  G+ P 
Sbjct: 166 LVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPS 225

Query: 64  SILFNAMINA-CSE--SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
              +N++I+  C +  +GN+     + ++M ++G  PT  T+  LI GY        +++
Sbjct: 226 VATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVR 285

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M Q + +  +  TYN L+   CS+  +EE   ++ +M   G+ P+ +T+  + + +
Sbjct: 286 VFEEMKQ-QGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGF 344

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A   +  M    V P+     I++ GY + G MEDAM     M +  + PN+
Sbjct: 345 CKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNV 404

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +N LI GF    D       L  M+E G++ DVVT++ ++ A    G + K  ++ D+
Sbjct: 405 TTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDE 464

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M + G+EP+   ++ + +G+   G  + A  I T M K     NVV +   I  +C   K
Sbjct: 465 MSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGK 524

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           M  A  +  +M +  + PN  TYET+  G  E
Sbjct: 525 MDEANDLLNEMLDKCLVPNGITYETIKEGMME 556



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 72/319 (22%), Positives = 159/319 (49%), Gaps = 1/319 (0%)

Query: 6   GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
           G G  +    +   ++E G  PT +T+  L+    +     + + +  ++++ G+    +
Sbjct: 241 GAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVV 300

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            +N++I+     G V+E +K+ ++M+D G  P   T+  ++KG+   G   ++   +  M
Sbjct: 301 TYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGM 360

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           ++ +NV+P+   Y IL+  +     +E+A  V   M   GI P+  TYN L   +++ G+
Sbjct: 361 TE-RNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGD 419

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A  +L EM+   +  +  T  +++   C +G +  A++ L  M E+ + PN + +N+
Sbjct: 420 WRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNT 479

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           +I+GF D  +     +  T ME+   + +VVT++  +  +   G M +  ++ ++M+   
Sbjct: 480 IIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKC 539

Query: 306 IEPDIHVFSILAKGYVRAG 324
           + P+   +  + +G +  G
Sbjct: 540 LVPNGITYETIKEGMMEKG 558



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 1/217 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG   +A+   + + E    P ++ YT L+    R  + +  +++   + K G+ P+   
Sbjct: 347 KGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTT 406

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I   S SG+   A  +  +MK+ G +    TYN LI      G+  +++KLL  MS
Sbjct: 407 YNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMS 466

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +   ++PN  TYN +++ +C K +I+ A+ +  +M     + + VTYN   + + Q G+ 
Sbjct: 467 E-VGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKM 525

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED 223
             A  +L EM +  + PN  T   I  G  ++G   D
Sbjct: 526 DEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 201/429 (46%), Gaps = 2/429 (0%)

Query: 6   GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
            +G   E + +   +IE+G  P+   +  ++  L R KR+K  + L+  V   G+ PD  
Sbjct: 338 AEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVF 396

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            +  +I+   +   + EA+ ++ KMK++G KP+  TY++L+ GY   G+ +E+LKL   M
Sbjct: 397 TYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEM 456

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
             DK   PN+ TY  L++ +  K + + A+ ++ +M  +G+     TYN L         
Sbjct: 457 P-DKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNR 515

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
               ++ML    +    P   T   I++G+ K G M  A     +M++  + PN+V + S
Sbjct: 516 VCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTS 575

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
            I G+      D   K L  +   G++PD+  ++  +D +   G M +       ++K G
Sbjct: 576 FIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDG 635

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + PD+ V++    GY       +A     SM K  V  +  ++TT+I G+     +  A+
Sbjct: 636 LTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFAL 695

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            +Y +M    + P+ KT+  L  G   +     A+ LL  M    V P   T  ++ ++ 
Sbjct: 696 ELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINAC 755

Query: 426 RAIGLAREA 434
              G  +EA
Sbjct: 756 VRDGKLQEA 764



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 190/402 (47%), Gaps = 36/402 (8%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L+ +   P + TY  L+  L + ++    ++L  K+++ G+KP  + +++++    E G 
Sbjct: 386 LVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGR 445

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +DEA+K++ +M D G  P   TY TL+KGY      + +  LL  M Q+  V   D TYN
Sbjct: 446 MDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQN-GVSCGDYTYN 504

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           IL+      N + E   ++ + ++ G  P  +TYN++   + + G    A  M  +M+  
Sbjct: 505 ILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKK 564

Query: 200 QVRPNERTCGIIVSGYC-----------------------------------KEGNMEDA 224
            + PN  T    + GYC                                   K+GNM  A
Sbjct: 565 GITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRA 624

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
           + FL  + +  + P++ V+NS + G+ ++K      K    M +  V  D   ++T++D 
Sbjct: 625 LHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDG 684

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           +S  G +    E++ +M+   + PD   F+ L  G  R+G+   A+ +L  MR+  V PN
Sbjct: 685 FSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPN 744

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           +V +  +I+      K+Q A  ++++M   G+ P+  TY+ L
Sbjct: 745 IVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 189/410 (46%), Gaps = 2/410 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L+  G +  ++  T L+            L L  +V  DG+ P ++ +  +I  C   G 
Sbjct: 282 LLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGM 341

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
            DE  K+ ++M + G  P+T  +N +IKG     + ++++ LL+L+  D  V P+  TY 
Sbjct: 342 TDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVV-DTGV-PDVFTYG 399

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+   C    + EA N+  KM  +G++P  VTY++L   Y + G    A ++  EM + 
Sbjct: 400 CLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDK 459

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              PNE T   ++ GY K+   ++A   L  M++  V      +N LI G   +     V
Sbjct: 460 GFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEV 519

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
           D+ L      G  P  +T+++I++ +  AG+MG    ++  M K GI P+I  ++    G
Sbjct: 520 DEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDG 579

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y R      A  +L  +R+ G+ P++  +   I  +C    M RA+     + + G+ P+
Sbjct: 580 YCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPD 639

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           +  Y + + GY   K    A +    M ++ V         + D +  +G
Sbjct: 640 VTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVG 689



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/427 (23%), Positives = 202/427 (47%), Gaps = 7/427 (1%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISK-VEKDGMKPDSILFNAMINACSESGNV 80
           E G  P  +TY+++V  L + +R    L L  + +   G K D +L   +++    +G V
Sbjct: 248 EAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEV 307

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
            +A+ +F ++   G  PT  TY  LIKG    G  +E+ KL + M + + + P+   +N+
Sbjct: 308 GKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIE-QGLLPSTYEFNL 366

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           +++        ++A  ++  +V +G+ PD  TY  L     ++ + + A  +  +M+   
Sbjct: 367 VIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAG 425

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           V+P+  T   ++ GYC++G M++A++    M +    PN V + +L+KG++  K  D   
Sbjct: 426 VKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAY 485

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
             L  M + GV     T++ +++       + +  E+    +  G  P    ++ +  G+
Sbjct: 486 ALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGF 545

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC--NAVKMQRAMSIYEKMCEIGINP 378
           V+AG    A  +   MRK G+ PN+V +T+ I G+C  N   +   + IY +    GI P
Sbjct: 546 VKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVR--RDGIQP 603

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           ++  Y   +  + +     RA   L ++ + G+ P  +        ++ + +  EA +  
Sbjct: 604 DIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFY 663

Query: 439 KSAEEDR 445
            S  + R
Sbjct: 664 YSMIKQR 670



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/479 (22%), Positives = 203/479 (42%), Gaps = 71/479 (14%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           ++ ++  G  P   + T L+            L+L  ++   G   D+ +++ +I AC  
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
            G   +A+++F +M  +G KP    Y   I G   +   + +L++L  M ++   +P + 
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKM-REAGFEPWEL 256

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKM-VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           TY+ +V        ++EA  +  +M +A+G + D V    L   Y   GE  +A  +  E
Sbjct: 257 TYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDE 316

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI-- 253
           + ++ V P   T G+++ G   EG  ++  +   +M E  + P+   FN +IKG L    
Sbjct: 317 VVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKR 376

Query: 254 -KDSDGVDK----------------------------ALTL---MEEFGVKPDVVTFSTI 281
            KD+ G+ K                            A+ L   M+E GVKP +VT+ ++
Sbjct: 377 WKDAIGLLKLVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSL 436

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +  +   G M +  +++ +M   G  P+   ++ L KGY++      A ++L  MR+ GV
Sbjct: 437 LLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGV 496

Query: 342 H-----------------------------------PNVVMFTTVISGWCNAVKMQRAMS 366
                                               P  + + ++I+G+  A  M  A  
Sbjct: 497 SCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFG 556

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           +Y +M + GI PN+ TY + + GY        A +LL  +   G++P  +      D++
Sbjct: 557 MYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTF 615



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/355 (21%), Positives = 163/355 (45%), Gaps = 39/355 (10%)

Query: 2   NILVG---KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           ++L+G   KG+  EA  +++ + ++G  P  +TYTTL+    ++K F +  +L++++ ++
Sbjct: 435 SLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQN 494

Query: 59  GMK-----------------------------------PDSILFNAMINACSESGNVDEA 83
           G+                                    P ++ +N++IN   ++G +  A
Sbjct: 495 GVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSA 554

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
             ++++M+  G  P   TY + I GY      + ++KLL  + +D  ++P+   YN  + 
Sbjct: 555 FGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRD-GIQPDIAAYNAFID 613

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +C + ++  A + +  ++  G+ PD   YN+    Y        A +  + M   +V  
Sbjct: 614 TFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVA 673

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +      ++ G+ K GN+  A+     M    V P+   F +L  G     D DG  + L
Sbjct: 674 DTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLL 733

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
             M    V P++VT++ +++A    G + +  ++ D+M+ +G+ PD   + IL +
Sbjct: 734 DDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDILPR 788



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 124/285 (43%), Gaps = 44/285 (15%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N  V  G    A  ++  + ++G  P ++TYT+ +    R       + L+  V +DG+
Sbjct: 542 INGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGI 601

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD   +NA I+   + GN+  A+     +   G  P  + YN+ + GY N         
Sbjct: 602 QPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKN--------- 652

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L++M+                          EA    Y M+   +  D   Y TL   +
Sbjct: 653 -LKMMA--------------------------EASKFYYSMIKQRVVADTEIYTTLIDGF 685

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++ G    A ++  EM  N V P+++T   +  G C+ G+++ A R L  M+ L+V PN+
Sbjct: 686 SKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNI 745

Query: 241 VVFNSLIKGFLDIKDSDG-VDKALTLMEEF---GVKPDVVTFSTI 281
           V +N LI   +     DG + +A  L +E    GV PD  T+  +
Sbjct: 746 VTYNMLINACV----RDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 132/515 (25%), Positives = 238/515 (46%), Gaps = 16/515 (3%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A   F  +++ G      +Y  L+  L         L     +EK G++PD + +N +  
Sbjct: 290 ARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAK 349

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
                G +  A K+ QKM   G  P   TY TLI G+  +G  EE+LKL Q  +  +  K
Sbjct: 350 GFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQ-ETLSRGFK 408

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
            N   YN+L+   C    IEEA  +  +M    ++PD + Y+ L     + G   RA Q+
Sbjct: 409 LNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQL 468

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             +M+  +  P+      ++ G  K GN+ +A  +      +++  ++V++N +I G++ 
Sbjct: 469 YEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVR 528

Query: 253 IKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
           +   DG+ +A+ L   M E G+ P VVTF+T+++ +   G + + +++ + +   G+ P 
Sbjct: 529 L---DGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPS 585

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
           +  ++ L   Y   G  Q+    L  M    V P  V +T +I G C   KM  ++ + E
Sbjct: 586 VVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLE 645

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
            M   G+ P+  TY T++  + + K+  +A +L  +M      P + T +++ ++    G
Sbjct: 646 YMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFG 705

Query: 430 LAREAKRVLKSAEEDRQSMPNKKDEIAVESIH-RKQNLSASNSTFLQI--PGVVSSEHNG 486
             ++  R++ S  EDR     K   + +   H  K  +S +   F Q+   G V S  + 
Sbjct: 706 DLKDVDRMVVSI-EDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDY 764

Query: 487 SSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQP 521
           S+   + +++  R   + T  K  FV     GV P
Sbjct: 765 SA---VINRLCKRG--LITEAKYFFVMMLSEGVTP 794



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 119/525 (22%), Positives = 219/525 (41%), Gaps = 94/525 (17%)

Query: 9   KPHEAHYIFNCLIEE-GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD-GMKPDSIL 66
           KP  A   F  LI E G R ++ +   +   L  + RFK + S+I  +  D G+   SI+
Sbjct: 96  KPDVAVAFFYFLINEYGFRHSIFSQFVVSHILAGKGRFKELDSVIKNLIVDQGLGSASII 155

Query: 67  FNAMIN-----------------ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY 109
            + ++                  A S    + +A+ +  KMKD   + +  TYN+L+   
Sbjct: 156 CDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNM 215

Query: 110 GNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
            +     +    +++         ++ T +IL+   C ++ +E+A + ++      + P 
Sbjct: 216 RHTDIMWDVYNEIKV----SGAPQSECTTSILIHGLCEQSKLEDAISFLHD-SNKVVGPS 270

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
            V+ NT+   + + G    A      M  N +  +  +  I++ G C  G+M++A+ F  
Sbjct: 271 IVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTD 330

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            M++  V P++V +N+L KGFL +    G  K +  M   G+ PD+VT++T++      G
Sbjct: 331 DMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMG 390

Query: 290 --------------------------------LMGKCQE---IFDDMVKAGIEPDIHVFS 314
                                            +G+ +E   +FD+M    +EPD  V+S
Sbjct: 391 NIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYS 450

Query: 315 ILAKGYVRAGEPQKAESILTSM---RKYGVH----------------------------- 342
           IL  G  + G  Q+A  +   M   RK+  H                             
Sbjct: 451 ILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRM 510

Query: 343 ---PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
               +VV++  +I G+     +  AM +Y KM E GI P++ T+ TL+ G+        A
Sbjct: 511 DLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEA 570

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
            ++L+V+  KG+ P   T   + +++  +G  +E    L   E +
Sbjct: 571 RKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEAN 615



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 80/340 (23%), Positives = 151/340 (44%), Gaps = 7/340 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA   F+          ++ Y  ++    R       + L  K+ + G+ P 
Sbjct: 491 LFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPS 550

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + FN +IN     G++ EA K+ + ++  G  P+  TY TL+  Y  VG  +E    L 
Sbjct: 551 VVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLH 610

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  +  V P   TY +L++  C +N + E+  ++  M A G+ PD+VTYNT+ + + + 
Sbjct: 611 EMEANA-VVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKG 669

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E  +A Q+   M  +   P + T  ++++  C  G+++D  R +  +++  +    V +
Sbjct: 670 KEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTY 729

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT---FSTIMDAWSSAGLMGKCQEIFDD 300
            ++IK          V KAL    +   K  V++   +S +++     GL+ + +  F  
Sbjct: 730 MTIIKAHC---AKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVM 786

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           M+  G+ PD  +   +   + + G        L  + K G
Sbjct: 787 MLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSG 826



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 145/297 (48%), Gaps = 3/297 (1%)

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +  D +L+N MI+       + EAM+++ KM + G  P+  T+NTLI G+   G   E+ 
Sbjct: 512 LMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEAR 571

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K+L+++ + K + P+  TY  L+ A+C   +++E ++ +++M A+ + P  VTY  L + 
Sbjct: 572 KMLEVI-RLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKG 630

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHP 238
             +  + + + Q+L  M    + P+  T   I+  +CK   +  A++ LY M  L    P
Sbjct: 631 LCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQ-LYNMMLLHNCDP 689

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
             V +  LI       D   VD+ +  +E+  +    VT+ TI+ A  + G + K    F
Sbjct: 690 TQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYF 749

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           + M+  G    I  +S +     + G   +A+     M   GV P+  +  TV++ +
Sbjct: 750 NQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAF 806



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/429 (21%), Positives = 181/429 (42%), Gaps = 44/429 (10%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA-CSE--- 76
           +  G +  +I Y  L++ L +  R +  L+L  ++E   ++PD I+++ +I+  C E   
Sbjct: 403 LSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFV 462

Query: 77  -------------------------------SGNVDEAMKIFQKMKDSGCKPTTSTYNTL 105
                                          +GN+ EA   F              YN +
Sbjct: 463 QRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIM 522

Query: 106 IKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
           I GY  +    E+++L   M + + + P+  T+N L+  +C +  + EA  ++  +   G
Sbjct: 523 IDGYVRLDGIAEAMQLYYKMIE-RGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKG 581

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           + P  VTY TL  AY + G        L EM+ N V P   T  +++ G C++  M +++
Sbjct: 582 LVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESL 641

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           + L  M    + P+ V +N++I+ F   K+     +   +M      P  VT+  +++A 
Sbjct: 642 QLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINAL 701

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHV----FSILAKGYVRAGEPQKAESILTSMRKYGV 341
               + G  +++ D MV +  + +I +    +  + K +   G+  KA      M   G 
Sbjct: 702 C---IFGDLKDV-DRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGF 757

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
             ++  ++ VI+  C    +  A   +  M   G+ P+ +  +T+L  + +        E
Sbjct: 758 VISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFE 817

Query: 402 LLQVMEEKG 410
            L ++ + G
Sbjct: 818 FLAMVVKSG 826



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 99/443 (22%), Positives = 190/443 (42%), Gaps = 25/443 (5%)

Query: 45  FKSILSLISKVEKDG-------MKPDSI--LFNAMINACSESGNVDEAMKIFQKMKDSG- 94
           F++++S +S+   DG       +KPD     F  +IN      ++     +   +   G 
Sbjct: 73  FRTVVSTLSETVVDGVLDRLRTLKPDVAVAFFYFLINEYGFRHSIFSQFVVSHILAGKGR 132

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
            K   S    LI   G +G       LL  + + +N   N   +++L  A+     I +A
Sbjct: 133 FKELDSVIKNLIVDQG-LGSASIICDLL--LEKFRNWDSNGLVWDMLAFAYSRHEMIHDA 189

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN----NQVRPNERTCGI 210
             V+ KM     Q    TYN+L           R   +++++ N    +    +E T  I
Sbjct: 190 LFVIAKMKDLNFQASVPTYNSLL-------HNMRHTDIMWDVYNEIKVSGAPQSECTTSI 242

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++ G C++  +EDA+ FL+   ++ V P++V  N+++  F  +   D       LM + G
Sbjct: 243 LIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNG 301

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           +  D  +++ ++     AG M +     DDM K G+EPD+  ++ LAKG++  G    A 
Sbjct: 302 LLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGAR 361

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            ++  M   G++P++V +TT+I G C    ++ A+ + ++    G   N+  Y  LL   
Sbjct: 362 KVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCL 421

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            +  +   A  L   ME   + P      ++       G  + A ++ +     R+   +
Sbjct: 422 CKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHH 481

Query: 451 KKDEIAVESIHRKQNLSASNSTF 473
                 +  + +  N+S + + F
Sbjct: 482 FAQRAVLLGLFKNGNISEARNYF 504


>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Cucumis sativus]
 gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Cucumis sativus]
          Length = 720

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 195/394 (49%), Gaps = 3/394 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSIL--SLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++G +   I Y+ ++ +LTR  +    L   L  ++E D ++ D +L N +I   +++G+
Sbjct: 237 QDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGD 296

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
            + A+     ++ SG  P TST+  +I   GN G+ EE+  + + M ++  +KP  + +N
Sbjct: 297 PNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEM-KEGGLKPRIKAFN 355

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L++ +  K S++EA +++ +M  SG+ PD  TY  L  AYA  G    A  +L +M+  
Sbjct: 356 ALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEAR 415

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            V+PN      I++ Y   G  +     L  MK   V P+   +N +I  F      D  
Sbjct: 416 NVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHA 475

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            +    M   G++PDVVT++T++D     G   +  E+F++M + G  P    ++I+   
Sbjct: 476 METYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINS 535

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
                +  + + +L  M+  G+ PNVV +TT++  + ++ +   A+   E M   G+ P+
Sbjct: 536 LGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPS 595

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
              Y  L+  + +     +A    +VM   G+RP
Sbjct: 596 ATMYNALINAFAQRGLSEQAVNAYRVMISDGLRP 629



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 196/409 (47%), Gaps = 3/409 (0%)

Query: 28  TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAM--K 85
           T +TY  L+ A  R    +  L+L+S++ +DG + D I ++ +I + + +  +D  +  K
Sbjct: 208 TPLTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFINYSLIIQSLTRTNKIDIPLLQK 267

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           ++++++    +      N +I G+   G P  +L  L  M Q   + P   T+  ++ A 
Sbjct: 268 LYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLS-MVQASGLNPKTSTFVAVISAL 326

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
            +    EEA  +  +M   G++P    +N L + YA+ G    AE ++ EM+ + + P+E
Sbjct: 327 GNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDE 386

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T G++V  Y   G  E A   L +M+   V PN  +F+ ++  + D  +     + L  
Sbjct: 387 HTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLRE 446

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M+   VKPD   ++ ++D +     +    E +D M+  GIEPD+  ++ L   + + G 
Sbjct: 447 MKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGY 506

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A  +   M++ G  P    +  +I+      K      +  KM   G+ PN+ TY T
Sbjct: 507 HDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTT 566

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           L+  YG + +   A + L+ M+  G++P  +    + +++   GL+ +A
Sbjct: 567 LVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQA 615



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 197/386 (51%), Gaps = 11/386 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  EA  IF  + E G +P +  +  L+    R+   K   S+IS++EK G+
Sbjct: 323 ISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGL 382

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +  +++A +  G  + A  + ++M+    +P T  ++ ++  Y + G+ +++ +
Sbjct: 383 SPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFE 442

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+ M ++ NVKP+   YN+++  +   N ++ A     +M++ GI+PD VT+NTL   +
Sbjct: 443 VLREM-KNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCH 501

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            ++G   RA ++  EMQ     P   T  I+++   ++   ++    L +M+   + PN+
Sbjct: 502 RKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNV 561

Query: 241 VVFNSLIKGFLDI-----KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           V + +L+    DI     + +D +D  L  M+  G+KP    ++ +++A++  GL  +  
Sbjct: 562 VTYTTLV----DIYGHSGRFNDAID-CLEAMKSAGLKPSATMYNALINAFAQRGLSEQAV 616

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
             +  M+  G+ P +   + L   +       +A SIL  M++  V P+VV +TT++   
Sbjct: 617 NAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKAL 676

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLK 381
               K  +  ++YE+M   G  P+ K
Sbjct: 677 IRVDKFDKVPAVYEEMILSGCTPDGK 702



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 191/389 (49%), Gaps = 4/389 (1%)

Query: 2   NILVG---KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           +I++G    G P+ A Y  + +   G  P   T+  +++AL    R +   ++  ++++ 
Sbjct: 286 DIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEG 345

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+KP    FNA++   +  G++ EA  I  +M+ SG  P   TY  L+  Y NVG+ E +
Sbjct: 346 GLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESA 405

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
             LL+ M + +NV+PN   ++ ++ ++  +   ++ + V+ +M  S ++PD   YN +  
Sbjct: 406 RHLLKQM-EARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMID 464

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            + ++     A +    M +  + P+  T   ++  + K G  + A      M+E    P
Sbjct: 465 TFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLP 524

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
               +N +I    + +  D V   L  M+  G+ P+VVT++T++D +  +G      +  
Sbjct: 525 CPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCL 584

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           + M  AG++P   +++ L   + + G  ++A +    M   G+ P+++   ++I+ +   
Sbjct: 585 EAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGED 644

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            +   A SI + M E  + P++ TY TL+
Sbjct: 645 RRDIEAFSILQYMKENDVKPDVVTYTTLM 673


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 197/420 (46%), Gaps = 8/420 (1%)

Query: 1   MNILVGKGKPHEA----HYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
           +N+++ +G  H       Y+ N  +     P  +++  ++ AL +       + +   + 
Sbjct: 155 LNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMP 214

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           +    PD   +  +++   +   +DEA+ +  +M+  GC P+   YN LI G    G   
Sbjct: 215 EKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLS 274

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
              KL+  M   K   PN+ TYN L+   C K  +++A +++ +MV+S   P+ VTY TL
Sbjct: 275 RVTKLVDNMFL-KGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTL 333

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
                +        ++L  M+    R N+    +++SG  KEG  E+AM    +M E   
Sbjct: 334 INGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGC 393

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            PN+VV++++I G       +   + L  M   G  P+V T+S++M  +   GL  +  +
Sbjct: 394 RPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQ 453

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           ++ +M + G   +   +S+L  G    G  ++A  + + M   G+ P+ V ++++I G C
Sbjct: 454 VWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLC 513

Query: 357 NAVKMQRAMSIYEKMC---EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
               M  A+ +Y +M    E    P++ TY  LL G    K   RA +LL  M ++G  P
Sbjct: 514 GIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDP 573



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 170/375 (45%), Gaps = 4/375 (1%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  + E+   P   TY TL+  L +++R    + L+ +++ +G  P  +++N +I+   
Sbjct: 209 VFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLC 268

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G++    K+   M   GC P   TYNTLI G    GK ++++ LL+ M   K + PND
Sbjct: 269 KKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI-PND 327

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY  L+     +    +   ++  M   G + +   Y+ L     + G+   A  +  +
Sbjct: 328 VTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKK 387

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M     RPN      ++ G C+EG   +A   L  M      PN+  ++SL+KGF     
Sbjct: 388 MAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGL 447

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
           S+   +    M+E G   +   +S ++D     G + +   ++  M+  GI+PD   +S 
Sbjct: 448 SEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSS 507

Query: 316 LAKGYVRAGEPQKAESILTSM---RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           + KG    G    A  +   M    +    P+VV +  ++ G C    + RA+ +   M 
Sbjct: 508 MIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCML 567

Query: 373 EIGINPNLKTYETLL 387
           + G +P++ T  T L
Sbjct: 568 DRGCDPDVITCNTFL 582



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 189/420 (45%), Gaps = 22/420 (5%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           T ++++        F S+  L+S++  +        F  +  A  ++   ++A+ +F +M
Sbjct: 79  TLSSMIENYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPEKAVDLFHRM 138

Query: 91  KDS-GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM---SQDKNVKPNDRTYNILVRAWC 146
            D   CK +  ++N+++    N G     L+    +   + + N+ PN  ++N++++A C
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               ++ A  V   M      PD  TY TL     +      A  +L EMQ+    P+  
Sbjct: 199 KLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
              +++ G CK+G++    + +  M      PN V +N+LI G L +K    +DKA++L+
Sbjct: 259 IYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHG-LCLKGK--LDKAVSLL 315

Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           E        P+ VT+ T+++             +   M + G   + H++S+L  G  + 
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKE 375

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+ ++A ++   M + G  PN+V+++ VI G C   K   A  I   M   G  PN+ TY
Sbjct: 376 GKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTY 435

Query: 384 ETLLWGY------GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
            +L+ G+       EA Q WR       M+E G    +    ++ D    +G  +EA  V
Sbjct: 436 SSLMKGFFKTGLSEEAIQVWRE------MDETGCSRNEFCYSVLIDGLCGVGRVKEAMMV 489



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 163/356 (45%), Gaps = 4/356 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L  + +  EA  + + +  EG  P+ + Y  L+  L ++     +  L+  +   G 
Sbjct: 229 MDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGC 288

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +N +I+     G +D+A+ + ++M  S C P   TY TLI G     +  +  +
Sbjct: 289 FPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGAR 348

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M +++  + N   Y++L+     +   EEA  +  KM   G +P+ V Y+ +    
Sbjct: 349 LLISM-EERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGL 407

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A+++L  M ++   PN  T   ++ G+ K G  E+A++    M E     N 
Sbjct: 408 CREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNE 467

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             ++ LI G   +          + M   G+KPD V +S+++      G M    +++ +
Sbjct: 468 FCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHE 527

Query: 301 MV---KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
           M+   +   +PD+  ++IL  G     +  +A  +L  M   G  P+V+   T ++
Sbjct: 528 MLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLN 583



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 92/385 (23%), Positives = 173/385 (44%), Gaps = 5/385 (1%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           DS L ++MI   +  G+     K+  +++         ++  + + YG    PE+++ L 
Sbjct: 77  DSTL-SSMIENYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPEKAVDLF 135

Query: 123 QLMSQD----KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
             M  +    ++VK  +   N+++        +E    VV   +   I P+ +++N + +
Sbjct: 136 HRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIK 195

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           A  + G   RA ++   M   +  P+  T   ++ G CKE  +++A+  L  M+     P
Sbjct: 196 ALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSP 255

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           + V++N LI G     D   V K +  M   G  P+ VT++T++      G + K   + 
Sbjct: 256 SPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLL 315

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           + MV +   P+   +  L  G V+         +L SM + G   N  +++ +ISG    
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKE 375

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            K + AM++++KM E G  PN+  Y  ++ G     +P  A+E+L  M   G  P   T 
Sbjct: 376 GKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTY 435

Query: 419 QLVADSWRAIGLAREAKRVLKSAEE 443
             +   +   GL+ EA +V +  +E
Sbjct: 436 SSLMKGFFKTGLSEEAIQVWREMDE 460



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 137/286 (47%), Gaps = 4/286 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  KGK  +A  +   ++     P  +TY TL+  L +Q+R      L+  +E+ G + +
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLN 361

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             +++ +I+   + G  +EAM +++KM + GC+P    Y+ +I G    GKP E+ ++L 
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILN 421

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M     + PN  TY+ L++ +      EEA  V  +M  +G   +   Y+ L       
Sbjct: 422 GMISSGCL-PNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGV 480

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM---KELEVHPNL 240
           G    A  +  +M    ++P+      ++ G C  G+M+ A++  + M   +E +  P++
Sbjct: 481 GRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDV 540

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
           V +N L+ G    KD       L  M + G  PDV+T +T ++  S
Sbjct: 541 VTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLS 586



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 7/216 (3%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GKP+EA  I N +I  G  P + TY++L+    +    +  + +  ++++ G   +
Sbjct: 407 LCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRN 466

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              ++ +I+     G V EAM ++ KM   G KP T  Y+++IKG   +G  + +LKL  
Sbjct: 467 EFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYH 526

Query: 124 --LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
             L  ++   +P+  TYNIL+   C +  +  A +++  M+  G  PD +T NT     +
Sbjct: 527 EMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLS 586

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
           +  ++    +   E    ++   +R     VSG CK
Sbjct: 587 EKSDSCEEGRSFLEELVARLLKRQR-----VSGACK 617


>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
          Length = 880

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 192/385 (49%), Gaps = 4/385 (1%)

Query: 50  SLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY 109
           +L+ ++E++G+     +++ M++  +   +  + + +F+++K+ G  PT  TY  LI  Y
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 494

Query: 110 GNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
             VGK  ++L++ ++M +++ VK N +TY++++  +        A+ V   MV  G++PD
Sbjct: 495 TKVGKISKALEVSRVM-KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 553

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
            + YN +  A+   G   RA Q + EMQ  + RP  RT   I+ GY K G+M  ++    
Sbjct: 554 VILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFD 613

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            M+     P +  FN LI G ++ + +  +   +TL    GV  +  T++ IM  ++S G
Sbjct: 614 MMRRCGCVPTVHTFNGLINGLVEKRQAVEILDEMTLA---GVSANEHTYTKIMQGYASVG 670

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
             GK  E F  +   G++ DI  +  L K   ++G  Q A ++   M    +  N  ++ 
Sbjct: 671 DTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYN 730

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
            +I GW     +  A  + ++M + G+ P++ TY + +    +A    RA + ++ ME  
Sbjct: 731 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 790

Query: 410 GVRPKKSTIQLVADSWRAIGLAREA 434
           GV+P   T   +   W    L  +A
Sbjct: 791 GVKPNIKTYTTLIKGWARASLPEKA 815



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 196/388 (50%), Gaps = 10/388 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+    GK  +A  +   + EEG +  L TY+ ++    + K + +  ++   + K+GM
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD IL+N +I+A    GN+D A++  ++M+    +PTT T+  +I GY   G    SL+
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +  +M +   V P   T+N L+     K    +A  ++ +M  +G+  +  TY  + + Y
Sbjct: 611 VFDMMRRCGCV-PTVHTFNGLINGLVEKR---QAVEILDEMTLAGVSANEHTYTKIMQGY 666

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A  G+T +A +    +QN  +  +  T   ++   CK G M+ A+     M    +  N 
Sbjct: 667 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 726

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            V+N LI G+    D       +  M++ GVKPD+ T+++ + A S AG M +  +  ++
Sbjct: 727 FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 786

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G++P+I  ++ L KG+ RA  P+KA S    M+  G+ P+  ++  +++   +   
Sbjct: 787 MEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRAS 846

Query: 361 MQRA------MSIYEKMCEIGINPNLKT 382
           +  A      M+I ++M E G+  ++ T
Sbjct: 847 IAEAYIYSGVMTICKEMVEAGLIVDMGT 874



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/523 (23%), Positives = 222/523 (42%), Gaps = 109/523 (20%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  H A   F  +   G  PT   YT+L+ A    +     LS + K++++G++   + 
Sbjct: 322 RGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVT 381

Query: 67  FNAMINACSESGNV-------DEAMKIFQ----------------------------KMK 91
           ++ ++   S++G+        DEA +I +                            +M+
Sbjct: 382 YSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREME 441

Query: 92  DSGCKPTTSTYNTLIKG-----------------------------------YGNVGKPE 116
           + G     + Y+T++ G                                   Y  VGK  
Sbjct: 442 EEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKIS 501

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           ++L++ ++M +++ VK N +TY++++  +        A+ V   MV  G++PD + YN +
Sbjct: 502 KALEVSRVM-KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNI 560

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
             A+   G   RA Q + EMQ  + RP  RT   I+ GY K G+M  ++     M+    
Sbjct: 561 ISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGC 620

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P +  FN LI G ++ + +  +   +TL    GV  +  T++ IM  ++S G  GK  E
Sbjct: 621 VPTVHTFNGLINGLVEKRQAVEILDEMTLA---GVSANEHTYTKIMQGYASVGDTGKAFE 677

Query: 297 IFDDMVKAGIEPDI-----------------------------------HVFSILAKGYV 321
            F  +   G++ DI                                    V++IL  G+ 
Sbjct: 678 YFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA 737

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           R G+  +A  ++  M+K GV P++  +T+ IS    A  M RA    E+M  +G+ PN+K
Sbjct: 738 RRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIK 797

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           TY TL+ G+  A  P +A    + M+  G++P K+    +  S
Sbjct: 798 TYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTS 840



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 179/393 (45%), Gaps = 8/393 (2%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
            E+  +P+   +  +V    R+           ++   G+ P S ++ ++I+A +   ++
Sbjct: 301 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDM 360

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP--NDRTY 138
           DEA+   +KMK+ G + +  TY+ ++ G+   G  E +        + K +    N   Y
Sbjct: 361 DEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFD---EAKRIHKTLNASIY 417

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
             ++ A C   ++E A  +V +M   GI      Y+T+   Y    +  +   +   ++ 
Sbjct: 418 GKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKE 477

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
               P   T G +++ Y K G +  A+     MKE  V  NL  ++ +I GF+ +KD   
Sbjct: 478 CGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWAN 537

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
                  M + G+KPDV+ ++ I+ A+   G M +  +   +M K    P    F  +  
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIH 597

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           GY ++G+ +++  +   MR+ G  P V  F  +I+G    V+ ++A+ I ++M   G++ 
Sbjct: 598 GYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGL---VEKRQAVEILDEMTLAGVSA 654

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           N  TY  ++ GY       +A E    ++ +G+
Sbjct: 655 NEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 687



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 157/323 (48%), Gaps = 1/323 (0%)

Query: 96  KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
           KP+ + +  ++K YG  G    + +  + M + + + P  R Y  L+ A+     ++EA 
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERM-RARGITPTSRIYTSLIHAYAVGRDMDEAL 364

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
           + V KM   GI+   VTY+ +   +++ G    A+    E +      N    G I+  +
Sbjct: 365 SCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAH 424

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           C+  NME A   +  M+E  +   + ++++++ G+  + D          ++E G  P V
Sbjct: 425 CQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTV 484

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
           VT+  +++ ++  G + K  E+   M + G++ ++  +S++  G+V+  +   A ++   
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M K G+ P+V+++  +IS +C    M RA+   ++M ++   P  +T+  ++ GY ++  
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604

Query: 396 PWRAEELLQVMEEKGVRPKKSTI 418
             R+ E+  +M   G  P   T 
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTF 627



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/259 (20%), Positives = 116/259 (44%)

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
           W  V        +P    +  + + Y + G+ +RA +    M+   + P  R    ++  
Sbjct: 294 WQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHA 353

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           Y    +M++A+  + +MKE  +  +LV ++ ++ GF     ++  D      +      +
Sbjct: 354 YAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLN 413

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
              +  I+ A      M + + +  +M + GI+  I ++  +  GY    + +K   +  
Sbjct: 414 ASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFK 473

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            +++ G  P VV +  +I+ +    K+ +A+ +   M E G+  NLKTY  ++ G+ + K
Sbjct: 474 RLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLK 533

Query: 395 QPWRAEELLQVMEEKGVRP 413
               A  + + M ++G++P
Sbjct: 534 DWANAFAVFEDMVKEGMKP 552



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/268 (20%), Positives = 110/268 (41%), Gaps = 41/268 (15%)

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           +L R     G+ ++A    FE  +   +P+    G++V  Y + G+M  A     RM+  
Sbjct: 282 SLQRILDTNGDNWQAVISAFEKIS---KPSRTEFGLMVKFYGRRGDMHRARETFERMRAR 338

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            + P   ++ SLI  +   +D   +D+AL+ + +                          
Sbjct: 339 GITPTSRIYTSLIHAYAVGRD---MDEALSCVRK-------------------------- 369

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
                 M + GIE  +  +S++  G+ +AG  + A+      ++     N  ++  +I  
Sbjct: 370 ------MKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYA 423

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C    M+RA ++  +M E GI+  +  Y T++ GY       +   + + ++E G  P 
Sbjct: 424 HCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPT 483

Query: 415 KSTIQLVADSWRAIG---LAREAKRVLK 439
             T   + + +  +G    A E  RV+K
Sbjct: 484 VVTYGCLINLYTKVGKISKALEVSRVMK 511



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 78/172 (45%)

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           KP    F  ++  +   G M + +E F+ M   GI P   +++ L   Y    +  +A S
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
            +  M++ G+  ++V ++ ++ G+  A   + A   +++   I    N   Y  +++ + 
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           +     RAE L++ MEE+G+    +    + D +  +   ++   V K  +E
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKE 477


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 218/468 (46%), Gaps = 26/468 (5%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +  Y++N +   G  P   T   L+  L    R    L++++ + + G  PD + +  +I
Sbjct: 114 QVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLI 173

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK-- 129
                   + +A  +F +M+  GC P   TY TL+KG    G    +LKL Q M  D   
Sbjct: 174 KGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSL 233

Query: 130 ---NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
              N KP   +Y+I++ A C     +EA ++  +M   G+ P  ++Y +L          
Sbjct: 234 YGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWE------- 286

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+++  EM N  V+PN  T  +++   CKEG + +A   L  M +  + PNL+ +NSL
Sbjct: 287 -EAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSL 345

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I+GF  + D +   +    M   G +PDV+ ++ +++ +     + +  ++++ M++ G 
Sbjct: 346 IEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGK 405

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD+  +  L  G  + G+   A+ +   M+ YG+  ++ ++   ++G C    +  AM 
Sbjct: 406 RPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAME 465

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           ++ K+    I  +++ +  L+ G  +A +   A EL + + ++ ++P   T  ++   + 
Sbjct: 466 LFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFC 525

Query: 427 AIGLAREAKRVLKSAEED-------------RQSMPNKKDEIAVESIH 461
             G   +A  + +  E++             R    +KK E  VE +H
Sbjct: 526 RGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLH 573



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/443 (23%), Positives = 210/443 (47%), Gaps = 32/443 (7%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L    +  E   +   ++  G+ P ++TYTTL+  L  + R      L ++++K G 
Sbjct: 138 LNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGC 197

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKM-KDSGC-----KPTTSTYNTLIKGYGNVGK 114
            P++I +  ++     +GN+  A+K+ Q+M  DS       KP   +Y+ +I       +
Sbjct: 198 TPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRR 257

Query: 115 PEESLKLLQLMSQ--------------------------DKNVKPNDRTYNILVRAWCSK 148
            +E+  L + M                            ++ V+PN  T+N+L+   C +
Sbjct: 258 EDEARDLFEEMKVQGMTPTVISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKE 317

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
             + EA +++  M+  GI P+ +TYN+L   +   G+   A ++   M +    P+    
Sbjct: 318 GKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICY 377

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
            ++++GYCK   +E+AM+    M ++   P++  + +L+ G           K   +M+ 
Sbjct: 378 TVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKV 437

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
           +G+  D+  +   ++     G + +  E+F+ +    I+ DI  F+ L  G  +AG+ + 
Sbjct: 438 YGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLET 497

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  +   + +  + P+VV +  +I  +C   ++ +A  +++KM + G  P+  TY TL+ 
Sbjct: 498 AWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIR 557

Query: 389 GYGEAKQPWRAEELLQVMEEKGV 411
           G+ E+K+  +  ELL +M ++ V
Sbjct: 558 GFFESKKLEKVVELLHMMVQRDV 580



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 143/302 (47%), Gaps = 1/302 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +FN ++ +G +P ++T+  L+  L ++ +      L+  + + G+ P+ + +N++I
Sbjct: 287 EAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLI 346

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                 G+++ A ++F  M   GC+P    Y  LI GY    K EE++KL   M Q    
Sbjct: 347 EGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGK- 405

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +P+ +TY  L+        + +A  +   M   GI  D   Y        + G  + A +
Sbjct: 406 RPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAME 465

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  ++++  ++ +      ++ G CK G +E A     ++ + E+ P++V +N +I  F 
Sbjct: 466 LFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFC 525

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                   +     ME+ G  PD +T++T++  +  +  + K  E+   MV+  +  D++
Sbjct: 526 RGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVN 585

Query: 312 VF 313
           + 
Sbjct: 586 IL 587



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 130/275 (47%), Gaps = 1/275 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L  +GK  EA  +   +I+ G  P L+TY +L+          S   L   +   G 
Sbjct: 311 IDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGC 370

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD I +  +IN   ++  V+EAMK++  M   G +P   TY  L+ G    GK  ++ K
Sbjct: 371 EPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKK 430

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L  +M +   +  +   Y I +   C    + EA  +  K+ +  I+ D   +N L    
Sbjct: 431 LFGVM-KVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGL 489

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A ++  ++   +++P+  T  I++  +C+ G +  A     +M++    P+ 
Sbjct: 490 CKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDK 549

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           + + +LI+GF + K  + V + L +M +  V  DV
Sbjct: 550 ITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 584



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 16/231 (6%)

Query: 216 CKEGNME--DAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
           CK GN+    A +F + M      P L  F  L+ G   IK    V      M   G+ P
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           D  T + +++   +   +G+   +   +++ G  PDI  ++ L KG        KA  + 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE----IGIN--PNLKTYETLL 387
           T M+K G  PN + + T++ G C    +  A+ ++++M       GIN  P + +Y  ++
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
               + ++   A +L + M+ +G+ P  + I   +  W       EAKR+ 
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTP--TVISYTSLMW------EEAKRLF 292



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 5/143 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G   EA  +FN L     +  +  +  L+  L +  + ++   L  K+ ++ +
Sbjct: 451 LNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEEL 510

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD + +N MI+     G V +A  +FQKM+ +GC P   TY TLI+G+    K E+ ++
Sbjct: 511 QPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVE 570

Query: 121 LLQLMSQ-----DKNVKPNDRTY 138
           LL +M Q     D N+  ++R +
Sbjct: 571 LLHMMVQRDVSLDVNILRHNRRH 593


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 210/446 (47%), Gaps = 43/446 (9%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A ++F  +   G +    +YT L+  L   K  +  L L   +++DG  P+   F
Sbjct: 232 GELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAF 291

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+   +SG V +A  +F  M  +G  P+  TYN +I GY  +G+  ++LK+ +LM +
Sbjct: 292 TFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEK 351

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA---QYG 184
           +    P+D TYN L+   C + + EEA  ++   V  G  P  VT+  L   Y    ++ 
Sbjct: 352 N-GCHPDDWTYNTLIYGLCDQKT-EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFD 409

Query: 185 ETYR--------------------------------AEQMLFEMQNNQVRPNERTCGIIV 212
           +  R                                A+++L E+  N + PN  T   I+
Sbjct: 410 DALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSII 469

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
            GYCK G ++ A+  L  M+     PN   +NSL+ G +  K        LT M++ G+ 
Sbjct: 470 DGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGII 529

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           P+V+T++T++              +F+ M + G++PD H +++L     +AG  ++A S 
Sbjct: 530 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 589

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           +  +RK GV    V +TT+I G+  A     A ++ E+M + G  P+  TY  LL    +
Sbjct: 590 I--VRK-GVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCK 646

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTI 418
            K   R  E L ++++  +R  K TI
Sbjct: 647 QK---RLNEALPILDQMSLRGIKCTI 669



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 193/413 (46%), Gaps = 4/413 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  + N  ++EG  PT++T+T L+      ++F   L + +K+     K D  +F 
Sbjct: 372 KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFG 431

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +IN+  +   + EA ++  ++  +G  P   TY ++I GY   GK + +L++L++M +D
Sbjct: 432 KLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 491

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
              +PN  TYN L+        + +A  ++ KM   GI P+ +TY TL +      +   
Sbjct: 492 -GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDN 550

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A ++   M+ N ++P+E    ++    CK G  E+A  F+ R     V    V + +LI 
Sbjct: 551 AFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKG---VALTKVYYTTLID 607

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           GF    ++D     +  M + G  PD  T+S ++ A      + +   I D M   GI+ 
Sbjct: 608 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 667

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
            I  ++IL    +R G+   A+ +   M   G  P+   +T  I+ +C   +++ A  + 
Sbjct: 668 TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 727

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            KM   G+ P++ TY  L+ G G      RA   L+ M      P   T  L+
Sbjct: 728 LKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLL 780



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 189/402 (47%), Gaps = 20/402 (4%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV   K H+A  +   + ++G  P +ITYTTL+     +  F +   L   +E++G+KPD
Sbjct: 507 LVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPD 566

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +  + +A  ++G  +EA     +    G   T   Y TLI G+   G  + +  L++
Sbjct: 567 EHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDFAATLIE 623

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D+   P+  TY++L+ A C +  + EA  ++ +M   GI+     Y  L     + 
Sbjct: 624 RMI-DEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLRE 682

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A++M  EM ++  +P+  T  + ++ YCKEG +EDA   + +M+   V P++V +
Sbjct: 683 GKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTY 742

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL------------- 290
           N LI G   +   D     L  M     +P+  T+  ++       L             
Sbjct: 743 NILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWN 802

Query: 291 ---MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
              +    ++ + MVK G+ P +  +S L  G+ +AG  ++A  +L  M   G+ PN  +
Sbjct: 803 LIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDI 862

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           +T +I   C+    ++A+S    M E G  P L++Y  L+ G
Sbjct: 863 YTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVG 904



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/508 (23%), Positives = 223/508 (43%), Gaps = 61/508 (12%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L+ K +  EA  + N +   G  P +ITYT+++    +  +    L ++  +E+DG 
Sbjct: 434 INSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGC 493

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P++  +N+++    +   + +AM +  KM+  G  P   TY TL++G  +    + + +
Sbjct: 494 QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFR 553

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L ++M Q+  +KP++  Y +L  A C     EEA++ +   V  G+    V Y TL   +
Sbjct: 554 LFEMMEQN-GLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDGF 609

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++ G T  A  ++  M +    P+  T  +++   CK+  + +A+  L +M    +   +
Sbjct: 610 SKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTI 669

Query: 241 VVFNSLIKGFLDIKDSD-----------------------------------GVDKALTL 265
             +  LI   L     D                                     +  +  
Sbjct: 670 FAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILK 729

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK------- 318
           ME  GV PDVVT++ ++D     G + +       MV A  EP+   + +L K       
Sbjct: 730 MEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNL 789

Query: 319 GYVRAG---------EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
            YVR+          E      +L  M K+G++P V  ++++I+G+C A +++ A  + +
Sbjct: 790 AYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLD 849

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
            MC  G++PN   Y  L+    + K   +A   + +M E G +P+  + +L+      +G
Sbjct: 850 HMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLL-----VVG 904

Query: 430 LAREAK-RVLKSAEEDRQSMPNKKDEIA 456
           L  E     +KS   D   +    DE+A
Sbjct: 905 LCNEGDFEKVKSLFCDLLELGYNHDEVA 932



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/468 (23%), Positives = 210/468 (44%), Gaps = 34/468 (7%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  +A  +F+ + + G  P+++TY  ++   ++  R    L +   +EK+G  PD
Sbjct: 298 LCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 357

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +N +I    +    +EA ++       G  PT  T+  LI GY    K +++L++  
Sbjct: 358 DWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKN 416

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K  K + + +  L+ +   K+ ++EA  ++ ++ A+G+ P+ +TY ++   Y + 
Sbjct: 417 KMMSSK-CKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKS 475

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A ++L  M+ +  +PN  T   ++ G  K+  +  AM  L +M++  + PN++ +
Sbjct: 476 GKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITY 535

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPD----------------------------- 274
            +L++G  D  D D   +   +ME+ G+KPD                             
Sbjct: 536 TTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGV 595

Query: 275 ---VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
               V ++T++D +S AG       + + M+  G  PD + +S+L     +     +A  
Sbjct: 596 ALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALP 655

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           IL  M   G+   +  +T +I       K   A  +Y +M   G  P+  TY   +  Y 
Sbjct: 656 ILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYC 715

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           +  +   AE+L+  ME +GV P   T  ++ D    +G    A   LK
Sbjct: 716 KEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLK 763



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 188/382 (49%), Gaps = 2/382 (0%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           Y   + +L R    + +  + S++ +DG+ PD++ +N MI +  + G++  A + F+ + 
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 210

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
           + G +P T T N L+ GY   G+  ++  L  LM      + N+ +Y IL++  C    +
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLF-LMMPLMGCQRNEYSYTILIQGLCDAKCV 269

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
            +A  +   M   G  P+   +  L     + G    A  +   M  N V P+  T   +
Sbjct: 270 RKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAM 329

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           + GY K G M DA++    M++   HP+   +N+LI G  D K  +  +     ++E G 
Sbjct: 330 IVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKE-GF 388

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            P VVTF+ +++ +  A        + + M+ +  + D+ VF  L    ++    ++A+ 
Sbjct: 389 TPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKE 448

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +L  +   G+ PNV+ +T++I G+C + K+  A+ + + M   G  PN  TY +L++G  
Sbjct: 449 LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 508

Query: 392 EAKQPWRAEELLQVMEEKGVRP 413
           + K+  +A  LL  M++ G+ P
Sbjct: 509 KDKKLHKAMALLTKMQKDGIIP 530



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 98/419 (23%), Positives = 200/419 (47%), Gaps = 2/419 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +++ L+++G  P  +TY T++ +  ++    +       + + G++P++   NA++    
Sbjct: 170 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYC 229

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
            +G + +A  +F  M   GC+    +Y  LI+G  +     ++L L  +M +D    PN 
Sbjct: 230 RTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRD-GCSPNV 288

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           R +  L+   C    + +A  +   M  +G+ P  +TYN +   Y++ G    A ++   
Sbjct: 289 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL 348

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M+ N   P++ T   ++ G C +   E+A   L    +    P +V F +LI G+   + 
Sbjct: 349 MEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEK 407

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D   +    M     K D+  F  ++++      + + +E+ +++   G+ P++  ++ 
Sbjct: 408 FDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTS 467

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           +  GY ++G+   A  +L  M + G  PN   + +++ G     K+ +AM++  KM + G
Sbjct: 468 IIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDG 527

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           I PN+ TY TLL G  +      A  L ++ME+ G++P +    ++ D+    G A EA
Sbjct: 528 IIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA 586



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 159/335 (47%), Gaps = 17/335 (5%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +I+EG  P   TY+ L+ AL +QKR    L ++ ++   G+K     +  +I+     G 
Sbjct: 625 MIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGK 684

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
            D A +++ +M  SG KP+ +TY   I  Y   G+ E++  L+  M ++  V P+  TYN
Sbjct: 685 HDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMERE-GVAPDVVTYN 743

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR-------AYAQYGETYR---- 188
           IL+        I+ A++ + +MV +  +P+  TY  L +       AY +  +T      
Sbjct: 744 ILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNL 803

Query: 189 -----AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                  Q+L  M  + + P   T   +++G+CK G +E+A   L  M    + PN  ++
Sbjct: 804 IELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIY 863

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
             LIK   D K  +     +++M E G +P + ++  ++    + G   K + +F D+++
Sbjct: 864 TLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLE 923

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
            G   D   + IL  G ++AG       +L+ M K
Sbjct: 924 LGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEK 958



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 146/346 (42%), Gaps = 40/346 (11%)

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           + YN  +R+    +  E    V  ++V  G+ PD VTYNT+ ++Y + G+   A +    
Sbjct: 149 KCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRL 208

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           +    + P   TC  +V GYC+ G +  A      M  +    N   +  LI+G  D K 
Sbjct: 209 LLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAK- 267

Query: 256 SDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
              V KAL L   M+  G  P+V  F+ ++     +G +G  + +FD M + G+ P +  
Sbjct: 268 --CVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMT 325

Query: 313 FSILAKGYVRAG----------------------------------EPQKAESILTSMRK 338
           ++ +  GY + G                                  + ++AE +L +  K
Sbjct: 326 YNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVK 385

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            G  P VV FT +I+G+C A K   A+ +  KM       +L+ +  L+    +  +   
Sbjct: 386 EGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKE 445

Query: 399 AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           A+ELL  +   G+ P   T   + D +   G    A  VLK  E D
Sbjct: 446 AKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 491


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 203/423 (47%), Gaps = 13/423 (3%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
           + + H P  +TYT LV  L++  R +  + ++ ++      PD+     ++ +      V
Sbjct: 141 MNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRV 200

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           D+A ++ ++M   G      TY+ L+ G     + +E++ LL      +   P+  TY+ 
Sbjct: 201 DDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYST 260

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           ++   C    + +A ++  +M  +   P A+TYN+L   Y + G+   A ++L +M ++ 
Sbjct: 261 VIDGLCKAGRLRDAVDIFEEMSCA---PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDN 317

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG-V 259
             P+  T   ++S +CK G ++DA     +M   ++ P++V F SL+ G       +G +
Sbjct: 318 CAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLC----GEGRM 373

Query: 260 DKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           + AL L+EE    G  P + T++ ++D +  +  + K +E+  D    G  P+   ++IL
Sbjct: 374 EDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNIL 433

Query: 317 AKGYVRAGEPQKAESILTSMRKYG--VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
             G  RAG   +A   L  +   G     +V M+  ++   C   +   A+  YE+M + 
Sbjct: 434 VAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQR 493

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G  P   T+ T+++   +A QP +A ELL+ M + G  P   T   V  ++   G+ ++A
Sbjct: 494 GYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 553

Query: 435 KRV 437
             +
Sbjct: 554 DEL 556



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 191/393 (48%), Gaps = 7/393 (1%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           TY  L+  L + +     + L+  ++  GM P ++L N +I     +G +  A+ ++++M
Sbjct: 82  TYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM 141

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
            D+   P   TY  L+ G    G+  +++++LQ M   ++V P++ T  ++V++ C  + 
Sbjct: 142 NDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHV-PDNTTLTVVVQSLCLGDR 199

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF-EMQNNQVRPNERTCG 209
           +++A  +V +M+  G+  +A+TY+ L     +      A  +L  E+      P+  T  
Sbjct: 200 VDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYS 259

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            ++ G CK G + DA+      +E+   P  + +NSLI G+    D D   + L  M + 
Sbjct: 260 TVIDGLCKAGRLRDAVDIF---EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDD 316

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
              PDV+T++T+M A+   G +    E+F  MV   + PD+  F+ L  G    G  + A
Sbjct: 317 NCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDA 376

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             +L  + + G  P +  +  V+ G+C + ++++A  +       G  PN  TY  L+ G
Sbjct: 377 LELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAG 436

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
              A +  +A + L  +  +G  P  +++ + A
Sbjct: 437 CCRAGRTDQALQYLDQLNSEG-GPCPTSVAMYA 468



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 171/348 (49%), Gaps = 7/348 (2%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRF-KSILSLISKVEKDGMKPDSILFNAMINACSESG 78
           ++  G     ITY+ LV  L + +R  +++  L+ +V + G  PD + ++ +I+   ++G
Sbjct: 210 MLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAG 269

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
            + +A+ IF++M    C PT  TYN+LI GY   G  +E+++LL  M  D N  P+  TY
Sbjct: 270 RLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDD-NCAPDVITY 325

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
             L+ A+C    +++A+ +  +MVA+ + PD VT+ +L       G    A ++L E+  
Sbjct: 326 TTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITR 385

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
               P   T   +V GYCK   +  A   +   +     PN V +N L+ G      +D 
Sbjct: 386 RGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQ 445

Query: 259 VDKALT-LMEEFGVKP-DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
             + L  L  E G  P  V  ++ I+DA    G      + +++M++ G  P    F+ +
Sbjct: 446 ALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATV 505

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
                +A +PQ+A  +L  M KYG  P       V+S +C A  +Q+A
Sbjct: 506 VFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 553



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 184/401 (45%), Gaps = 13/401 (3%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A  +   ++   H P   T T +V +L    R      L+ ++   GM  ++I +
Sbjct: 163 GRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITY 222

Query: 68  NAMINACSESGNVDEAMKIF-QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +A+++   +   +DEA+ +   ++   G  P   TY+T+I G    G+  +++ + + MS
Sbjct: 223 SALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS 282

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
                 P   TYN L+  +C    ++EA  ++ KMV     PD +TY TL  A+ + G  
Sbjct: 283 ----CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRL 338

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++  +M  N++ P+  T   +V G C EG MEDA+  L  +      P +  +N +
Sbjct: 339 DDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCV 398

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           + G+     S+ V KA  L+ +F   G  P+ VT++ ++     AG   +  +  D +  
Sbjct: 399 VDGYCK---SNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNS 455

Query: 304 AG--IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
            G      + +++I+     R G    A      M + G  P    F TV+   C A + 
Sbjct: 456 EGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQP 515

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           Q+A  + E+M + G  P   T + ++  Y  A    +A+EL
Sbjct: 516 QQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 556



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 103/436 (23%), Positives = 204/436 (46%), Gaps = 15/436 (3%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLI-SKVEKDGMKPDSILFNAMINACSESG 78
           +++ G+     T+  ++  L    + + +  L+  ++   G+ PD +  N ++    ++ 
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
           +   AM +F KM + G    T+ YN LI         +E++ LL  M + + + P    +
Sbjct: 61  DTTTAMALFDKMAELGAVNHTTYYN-LIHPLCKARLLDEAMGLLLDM-KSRGMNPGTLLH 118

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           N+++   C    +  A  V Y+ +     PD +TY  L    ++ G    A Q+L EM +
Sbjct: 119 NVVIGGLCRAGRLRHALGV-YRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVS 177

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
            +  P+  T  ++V   C    ++DA   +  M    +  N + +++L+ G    +    
Sbjct: 178 ARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCER--- 234

Query: 259 VDKALTLM----EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           +D+A+ L+       G  PD+VT+ST++D    AG +    +IF++M  A   P    ++
Sbjct: 235 LDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA---PTAITYN 291

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            L  GY RAG+  +A  +L  M      P+V+ +TT++S +C   ++  A  ++++M   
Sbjct: 292 SLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVAN 351

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
            ++P++ T+ +L+ G     +   A ELL+ +  +G  P   T   V D +      R+A
Sbjct: 352 KLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKA 411

Query: 435 KRVLKSAEEDRQSMPN 450
           + ++      R  +PN
Sbjct: 412 EELVADFRS-RGFVPN 426



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 109/225 (48%), Gaps = 1/225 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+     G+  +A+ +F  ++     P ++T+T+LV  L  + R +  L L+ ++ + G 
Sbjct: 329 MSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGC 388

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P    +N +++   +S  V +A ++    +  G  P T TYN L+ G    G+ +++L+
Sbjct: 389 PPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQ 448

Query: 121 LL-QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            L QL S+      +   Y I++ A C     ++A     +M+  G  P A T+ T+  A
Sbjct: 449 YLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFA 508

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
             +  +  +A ++L EM      P   TC  +VS YC+ G ++ A
Sbjct: 509 LCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 553


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 197/398 (49%), Gaps = 11/398 (2%)

Query: 20  LIEEGHR----PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           L+EE  R    P ++T+ TL++ L R   F+ +  +++++ + G  PD  ++  +I+   
Sbjct: 249 LMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGIC 308

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G++  A +I  +M   G KP    YNTL+KG  +  + EE+ +LL  M  DK+   +D
Sbjct: 309 KEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMF-DKDCPLDD 367

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            T+NILV  +C    ++    ++ +M+  G  PD +TY T+   + + G    A  +L  
Sbjct: 368 VTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 427

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M     +PN  +  I++ G C      DA   + +M +     N + FN+LI  FL  K 
Sbjct: 428 MTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLIN-FLCKKG 486

Query: 256 SDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
              V++A+ L+++    G  PD++++ST++D    AG   +  E+ + MV  G+ P+  +
Sbjct: 487 L--VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTII 544

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           +S +A    R G   K   +  +++   +  + V++  VIS  C   + +RA+     M 
Sbjct: 545 YSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMV 604

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
             G  PN  TY  L+ G         A+E+L  +  KG
Sbjct: 605 SSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 207/444 (46%), Gaps = 41/444 (9%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   TY  +V AL  + R    L+++ ++ + G  P   +++ ++ A    G    A+++
Sbjct: 120 PNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRV 179

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            + +   GC       N ++    + G  +++L LL+ +      +P+  +YN +++  C
Sbjct: 180 LEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPS-FGCEPDVVSYNAVLKGLC 238

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                     ++ +MV     P+ VT+NTL     + G   R  ++L +M  +   P+ R
Sbjct: 239 MAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIR 298

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL-------------DI 253
               I+ G CKEG+++ A   L RM    + PN+V +N+L+KG               ++
Sbjct: 299 MYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 358

Query: 254 KDSDG-------------------VDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLM 291
            D D                    VD+ + L+E+    G  PDV+T++T+++ +   GL+
Sbjct: 359 FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLI 418

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            +   +   M   G +P+   ++I+ KG   A     AE +++ M + G   N + F T+
Sbjct: 419 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 478

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I+  C    +++A+ + ++M   G +P+L +Y T++ G G+A +   A ELL VM  KG+
Sbjct: 479 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 538

Query: 412 RPKKSTIQLVADSWRAIGLAREAK 435
            P       +A +     L+RE +
Sbjct: 539 SPNTIIYSSIASA-----LSREGR 557



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/438 (22%), Positives = 207/438 (47%), Gaps = 1/438 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  +G   +A ++   L   G  P +++Y  ++  L   KR+  +  L+ ++ +   
Sbjct: 199 LNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMAC 258

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + FN +I+    +G  +   ++  +M + GC P    Y T+I G    G  + + +
Sbjct: 259 PPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHE 318

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M     +KPN   YN L++  CS    EE   ++ +M       D VT+N L   +
Sbjct: 319 ILNRMPS-YGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFF 377

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G   R  ++L +M  +   P+  T   +++G+CKEG +++A+  L  M      PN 
Sbjct: 378 CQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNT 437

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +  ++KG    +     +  ++ M + G   + +TF+T+++     GL+ +  E+   
Sbjct: 438 ISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQ 497

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  G  PD+  +S +  G  +AG+  +A  +L  M   G+ PN ++++++ S      +
Sbjct: 498 MLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGR 557

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           + + + +++ + +  I  +   Y  ++    +  +  RA E L  M   G  P +ST  +
Sbjct: 558 INKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTI 617

Query: 421 VADSWRAIGLAREAKRVL 438
           +     + G  +EA+ +L
Sbjct: 618 LIRGLASEGFVKEAQEML 635



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/408 (22%), Positives = 188/408 (46%), Gaps = 4/408 (0%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           Y  +VA   R  + +S   L + V    + P++  +  ++ A    G + +A+ +  +M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
             GC P    Y+ +++     G    ++++L+ +   +    +    N+++ A C + S+
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDL-HARGCALDVGNCNLVLNAICDQGSV 208

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           ++A +++  + + G +PD V+YN + +           ++++ EM      PN  T   +
Sbjct: 209 DKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 268

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           +S  C+ G  E     L +M E    P++ ++ ++I G           + L  M  +G+
Sbjct: 269 ISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGL 328

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           KP+VV ++T++    SA    + +E+  +M       D   F+IL   + + G   +   
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 388

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +L  M  +G  P+V+ +TTVI+G+C    +  A+ + + M   G  PN  +Y  +L G  
Sbjct: 389 LLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 448

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            A++   AE+L+  M ++G      T   + +     GL  +A  +LK
Sbjct: 449 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLK 496



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 159/339 (46%), Gaps = 4/339 (1%)

Query: 102 YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
           YN ++ GY   G+ E + +L   +     V PN  TY  +VRA C++  I +A  V+ +M
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP----VPPNAYTYFPVVRALCARGRIADALAVLDEM 148

Query: 162 VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM 221
              G  P    Y+ +  A  + G    A ++L ++       +   C ++++  C +G++
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 208

Query: 222 EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
           + A+  L  +      P++V +N+++KG    K    V + +  M      P++VTF+T+
Sbjct: 209 DKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 268

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +      GL  +  E+   M + G  PDI +++ +  G  + G  + A  IL  M  YG+
Sbjct: 269 ISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGL 328

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
            PNVV + T++ G C+A + +    +  +M +     +  T+  L+  + +     R  E
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 388

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
           LL+ M   G  P   T   V + +   GL  EA  +LKS
Sbjct: 389 LLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 427



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/235 (17%), Positives = 96/235 (40%), Gaps = 3/235 (1%)

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +N+++ G+     +  ++ A  L     V P+  T+  ++ A  + G +     + D+M 
Sbjct: 93  YNAMVAGYCR---AGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           + G  P   ++ ++ +   R G  + A  +L  +   G   +V     V++  C+   + 
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
           +A+ +   +   G  P++ +Y  +L G   AK+    +EL++ M      P   T   + 
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 423 DSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIP 477
                 GL      VL    E   +   +     ++ I ++ +L  ++    ++P
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMP 324


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 203/444 (45%), Gaps = 6/444 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK      +   L   G +PT++TY  L+ AL +  R +    L  ++E+ GM P 
Sbjct: 231 LCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPS 290

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + F  +IN  +      E   + Q+M+  G  P    YN LI  +   G   ++L+L  
Sbjct: 291 VVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFD 350

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K +KP   TYN++ +A C +  +E A  ++  M++ G+      +NT+     Q 
Sbjct: 351 EMVL-KKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQ- 408

Query: 184 GETYRAEQMLF---EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
             T R E ++    EM    +RPN+      +   CK G  ++A+   ++     +  NL
Sbjct: 409 -RTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNL 467

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
              N+LI G  + K      K +  M   G++ D +T++ ++        M +  ++  D
Sbjct: 468 ATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGD 527

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M + G +PD+  F+ L   Y   G+ ++   +L  M+  G+ P++V + T+I G C A  
Sbjct: 528 MTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKD 587

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +++A     ++ + G+ PN+  Y  L+ GYG       A + ++ M+  G++P   T   
Sbjct: 588 IRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGS 647

Query: 421 VADSWRAIGLAREAKRVLKSAEED 444
           +       GL  EAK +   A E+
Sbjct: 648 LMYWMCHAGLVEEAKTIFSQAREN 671



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 199/385 (51%), Gaps = 2/385 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVA-ALTRQKRFKSILSLISKVEKDGMKP 62
           L  +G+   A  I   ++  G       + T+VA  L R +R +S++S+ +++   GM+P
Sbjct: 371 LCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRP 430

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           +  L  A +    + G   EA+ I+ K  + G     +T N LI G       +E+ K++
Sbjct: 431 NDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVI 490

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           Q M  +K ++ +  TYNI++R  C  + +EEA  +   M   G +PD  T+NTL  AY  
Sbjct: 491 QTM-LNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCN 549

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+      +L +M+   ++P+  + G I+ G+CK  ++  A  +L  + +  + PN+ +
Sbjct: 550 LGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFI 609

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +N+LI G+    D  G   A+  M+  G++P  VT+ ++M     AGL+ + + IF    
Sbjct: 610 YNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQAR 669

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           +  ++  +  ++I+ +GY + G+  +A +    MR  G+ PN + +TT++  +  +   +
Sbjct: 670 ENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSE 729

Query: 363 RAMSIYEKMCEIGINPNLKTYETLL 387
            A  ++++M   G+ P+  TY TL+
Sbjct: 730 EASKLFDEMVGSGVIPDNITYGTLI 754



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/487 (22%), Positives = 213/487 (43%), Gaps = 70/487 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   G+  EA  +   + + G  P+++T+  L+  L R +RF  +  ++ ++E+ G+
Sbjct: 263 MDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGV 322

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ +++N +I      G+  +A+++F +M     KPT  TYN + K     G+ E + +
Sbjct: 323 SPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAER 382

Query: 121 LLQLMSQ-----------------------------------DKNVKPNDRTYNILVRAW 145
           +L+ M                                      + ++PND      +R  
Sbjct: 383 ILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMREL 442

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C     +EA  + +K +  G+  +  T N L     +      A +++  M N  +  + 
Sbjct: 443 CKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDS 502

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T  I++ G CK+  ME+A++    M      P+L  FN+L+  + ++   +     L  
Sbjct: 503 ITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQ 562

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M+  G++PD+V++ TI+D    A  + K +E   +++  G++P++ +++ L  GY R G+
Sbjct: 563 MKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGD 622

Query: 326 PQKAESILTSMRKYGVHP-----------------------------------NVVMFTT 350
              A   + +M+  G+ P                                    V+ +T 
Sbjct: 623 ISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTI 682

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I G+C   KM  A++ +E+M   GI+PN  TY TL++ Y ++     A +L   M   G
Sbjct: 683 MIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSG 742

Query: 411 VRPKKST 417
           V P   T
Sbjct: 743 VIPDNIT 749



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 159/338 (47%), Gaps = 7/338 (2%)

Query: 78  GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT 137
           G++  A   F+ +   G  P+  T N  ++     G+ + + ++   M + +NV  N+ +
Sbjct: 164 GSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYS 223

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           Y  +++A C    ++  + ++ ++  +G+QP  VTYN L  A  + G    A ++   M+
Sbjct: 224 YTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRME 283

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
              + P+  T GI+++G  +     +    L  M++L V PN V++N LI G+   K   
Sbjct: 284 QGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELI-GWHCRKGH- 341

Query: 258 GVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF- 313
              +AL L +E     +KP  VT++ I  A    G M + + I +DM+  G+     +F 
Sbjct: 342 -CSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFN 400

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           +++A    R    +   SI   M   G+ PN  + T  +   C   K Q A+ I+ K   
Sbjct: 401 TVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLN 460

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
            G+  NL T   L+ G  E K    A +++Q M  KG+
Sbjct: 461 KGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGI 498



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 149/353 (42%), Gaps = 34/353 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L   GK  EA  I+   + +G    L T   L+  L   K  K    +I  +   G+
Sbjct: 439 MRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGI 498

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + DSI +N MI  C +   ++EA+K+   M   G KP   T+NTL+  Y N+GK EE+  
Sbjct: 499 ELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFH 558

Query: 121 LLQLMS----------------------------------QDKNVKPNDRTYNILVRAWC 146
           LL  M                                    D+ +KPN   YN L+  + 
Sbjct: 559 LLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYG 618

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               I  A + V  M ++GIQP  VTY +L       G    A+ +  + + N V     
Sbjct: 619 RNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVI 678

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
              I++ GYCK G M +A+ +   M+   + PN + + +L+  +    +S+   K    M
Sbjct: 679 GYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEM 738

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
              GV PD +T+ T++   S    + K      ++    +  D  +++IL+ G
Sbjct: 739 VGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYNILSNG 791



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/203 (20%), Positives = 94/203 (46%), Gaps = 1/203 (0%)

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF-GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           P++   N+ ++  +     D   +    M E   V  +  +++ ++ A   AG +    E
Sbjct: 183 PSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFE 242

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +  ++ +AG++P +  +++L     ++G  ++A  +   M + G+ P+VV F  +I+G  
Sbjct: 243 MLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLA 302

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
              +      + ++M ++G++PN   Y  L+  +       +A  L   M  K ++P   
Sbjct: 303 RGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAV 362

Query: 417 TIQLVADSWRAIGLAREAKRVLK 439
           T  L+A +    G    A+R+L+
Sbjct: 363 TYNLIAKALCKEGEMERAERILE 385



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 5/147 (3%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA  IF+   E      +I YT ++    +  +    ++   ++   G+ P+ + +
Sbjct: 656 GLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTY 715

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             ++ A S+SGN +EA K+F +M  SG  P   TY TLI     V   ++ +     +S 
Sbjct: 716 TTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSS 775

Query: 128 DKNVKPNDRTYNILVRA----WCSKNS 150
               K +DR YNIL       WC K +
Sbjct: 776 GALTK-DDRMYNILSNGINAPWCQKEA 801


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 189/394 (47%), Gaps = 7/394 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G  P ++T++TL+  L R   F+ +  + +++ + G  PD  ++  +I+   +   
Sbjct: 243 MVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEER 302

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           ++ A  I  +M   G  P    YNTL+KG  +  + EE+  LL  M  DK+   +D T+N
Sbjct: 303 LEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMF-DKDCPLDDVTFN 361

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           ILV   C    ++    V+ +M+  G  PD +TY T+   + + G    A  +L  M   
Sbjct: 362 ILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAAC 421

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
             RPN  +  I++ G C      DA   + +M +    PN V FN+LI  FL  K    V
Sbjct: 422 GCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLIN-FLCKKGL--V 478

Query: 260 DKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           ++A+ L+++    G  PD++++ST++D    AG   +  E+ + MVK G+ P+  ++S +
Sbjct: 479 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSI 538

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
           A      G   K   +  +++   V  + V++  VIS  C   +  RA+     M   G 
Sbjct: 539 ASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGC 598

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
            PN  TY  L+ G         A+E+L  +  KG
Sbjct: 599 VPNESTYTILIRGLASEGFVKEAQEILTELCSKG 632



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/438 (24%), Positives = 203/438 (46%), Gaps = 35/438 (7%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   TY  LV AL  + R    L+++  + + G  P   +++  + A   +     A+ +
Sbjct: 109 PNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGV 168

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            + +   GC       N +++   + G  +E+++LL+ +      +P+  +YN ++R  C
Sbjct: 169 LRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLC 228

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                    +++ +MVA+G  P+ VT++TL     + G   R  ++  +M  +   P+ R
Sbjct: 229 MARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVR 288

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG----------------- 249
               I+ G CKE  +E A   L RM    + PN+V +N+L+KG                 
Sbjct: 289 MYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEM 348

Query: 250 --------------FLDIKDSDG-VDKALTLME---EFGVKPDVVTFSTIMDAWSSAGLM 291
                          +D    +G VD+ + ++E   E G  PDV+T++T+++ +   GL+
Sbjct: 349 FDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLI 408

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            +   +   M   G  P+   ++I+ KG   A     AE +++ M + G  PN V F T+
Sbjct: 409 DEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTL 468

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I+  C    +++A+ + ++M   G +P+L +Y T++ G G+A     A ELL VM +KG+
Sbjct: 469 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGM 528

Query: 412 RPKKSTIQLVADSWRAIG 429
            P       +A +    G
Sbjct: 529 SPNTIIYSSIASALSGEG 546



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/415 (23%), Positives = 197/415 (47%), Gaps = 1/415 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P +++Y  ++  L   +R+  +  L+ ++   G  P+ + F+ +I     +G  +  
Sbjct: 212 GCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERV 271

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            ++  +M + GC P    Y T+I G     + E +  +L  M     + PN   YN L++
Sbjct: 272 HEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPS-YGLSPNVVCYNTLLK 330

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             CS +  EEA  ++ +M       D VT+N L     Q G   R  ++L +M  +   P
Sbjct: 331 GLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMP 390

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   +++G+CKEG +++A+  L  M      PN V +  ++KG    +     ++ +
Sbjct: 391 DVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELM 450

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           + M + G  P+ VTF+T+++     GL+ +  E+   M+  G  PD+  +S +  G  +A
Sbjct: 451 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 510

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G   +A  +L  M K G+ PN ++++++ S      ++ + + ++E + +  +  +   Y
Sbjct: 511 GNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLY 570

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             ++    +  +  RA E L  M   G  P +ST  ++     + G  +EA+ +L
Sbjct: 571 NAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEIL 625



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 90/165 (54%), Gaps = 1/165 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  KG   +A  +   ++  G  P LI+Y+T++  L +       L L++ + K GM
Sbjct: 469 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGM 528

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P++I+++++ +A S  G +++ +++F+ ++D+  +     YN +I      G+ + +++
Sbjct: 529 SPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIE 588

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
            L  M     V PN+ TY IL+R   S+  ++EA  ++ ++ + G
Sbjct: 589 FLAYMVSSGCV-PNESTYTILIRGLASEGFVKEAQEILTELCSKG 632


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 200/415 (48%), Gaps = 2/415 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L E+G +  L+TY TLV  L R + F+  + ++ ++ + G  P     + +I    + G+
Sbjct: 286 LGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGS 345

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           ++ A ++  K+   G  P    YN++I      GK EE+  L  +M++ + + PND TY 
Sbjct: 346 IEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAE-RGLNPNDVTYT 404

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           IL+  +  +  ++ A+    KM+  GI     +YN++     ++G+   AE +  EM + 
Sbjct: 405 ILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDK 464

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            ++P   T   ++SGYCK+G +  A +  + M    + PN V F +LI G   I      
Sbjct: 465 GLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEA 524

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            K    M E  + P+ VT++ +++     G   +  E+ D+M+K G+ PD + +  L  G
Sbjct: 525 SKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAG 584

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
               G   +A+  +  +       + + +T ++ G+C   +++ A+   ++M   G+  +
Sbjct: 585 LCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMD 644

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           L +Y  L+ G    +      ELL+ M  KG++P      ++ D +   G  ++A
Sbjct: 645 LVSYAVLISG-ALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKA 698



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 199/433 (45%), Gaps = 1/433 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           + N + + G  P + T + L+ AL R ++F+ +L L   +   G+KPD  ++  ++    
Sbjct: 177 VVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLC 236

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           E  + ++A +I  + + +GC  +  TYN  I G     +  E++++ + + + K +K + 
Sbjct: 237 ELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGE-KGLKADL 295

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY  LV   C     E    ++ +M+  G  P     + L     + G    A ++L +
Sbjct: 296 VTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNK 355

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           +    V PN      +++  CK G +E+A      M E  ++PN V +  LI GF     
Sbjct: 356 VGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAK 415

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D        M E G+   V +++++++     G M   + +F +MV  G++P +  ++ 
Sbjct: 416 LDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTS 475

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  GY + G   KA  +   M   G+ PN V FT +I G C   KM  A  ++++M E+ 
Sbjct: 476 LISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELK 535

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           I PN  TY  L+ G+       RA ELL  M +KG+ P   T + +     + G   EAK
Sbjct: 536 ILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAK 595

Query: 436 RVLKSAEEDRQSM 448
             +       Q +
Sbjct: 596 EFINDLHHKHQRL 608



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 213/445 (47%), Gaps = 17/445 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  EA  +F+ + E G  P  +TYT L+    R+ +        +K+ + G+
Sbjct: 372 INSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGI 431

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
                 +N+MIN   + G +  A  +F++M D G KPT +TY +LI GY   G   ++ K
Sbjct: 432 SATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFK 491

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M+  K + PN  T+  L+   C  N + EA  +  +MV   I P+ VTYN L   +
Sbjct: 492 LYHEMT-GKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGH 550

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G T RA ++L EM    + P+  T   +++G C  G + +A  F+  +       + 
Sbjct: 551 CREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDE 610

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           + + +L++GF        + +AL   +E    G++ D+V+++ ++     +G + +   I
Sbjct: 611 LCYTALLQGFC---KEGRIKEALVARQEMVGRGLQMDLVSYAVLI-----SGALNQNDRI 662

Query: 298 FDDMVK----AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
             ++++     G++PD  +++IL  G++++G  +KA      M   G  PN V +T +++
Sbjct: 663 LFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVN 722

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G   A  +  A  ++++M      PN  TY   L    +      A +L   M + G   
Sbjct: 723 GLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFA 781

Query: 414 KKSTIQLVADSWRAIGLAREAKRVL 438
              T  ++   +  IG  +EA ++L
Sbjct: 782 NTVTYNILIRGYCQIGKFQEAAKLL 806



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/403 (23%), Positives = 183/403 (45%), Gaps = 2/403 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+  G    A  + N + + G  P L  Y +++ +L +  + +    L S + + G+ P+
Sbjct: 340 LIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPN 399

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +  +I+       +D A   F KM + G   T  +YN++I      GK + +  L +
Sbjct: 400 DVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFK 459

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  DK +KP   TY  L+  +C    + +A+ + ++M   GI P+ VT+  L     Q 
Sbjct: 460 EMV-DKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQI 518

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +   A ++  EM   ++ PNE T  +++ G+C+EGN   A   L  M +  + P+   +
Sbjct: 519 NKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTY 578

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
             LI G           + +  +     + D + ++ ++  +   G + +      +MV 
Sbjct: 579 RPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVG 638

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G++ D+  +++L  G +   +    E +L  M   G+ P+ V++T +I G+  +  +++
Sbjct: 639 RGLQMDLVSYAVLISGALNQNDRILFE-LLREMHGKGMQPDNVIYTILIDGFIKSGNLKK 697

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
           A   +  M   G  PN  TY  L+ G  +A     A+ L + M
Sbjct: 698 AFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRM 740



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/449 (23%), Positives = 182/449 (40%), Gaps = 71/449 (15%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK   A  +F  ++++G +PT+ TYT+L++   +         L  ++   G+ P+++ F
Sbjct: 449 GKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTF 508

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            A+I    +   + EA K+F +M +    P   TYN LI+G+   G    + +LL  M +
Sbjct: 509 TALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIK 568

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVV----------------------------- 158
            K + P+  TY  L+   CS   + EA   +                             
Sbjct: 569 -KGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIK 627

Query: 159 ------YKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
                  +MV  G+Q D V+Y  L        +    E +L EM    ++P+     I++
Sbjct: 628 EALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFE-LLREMHGKGMQPDNVIYTILI 686

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG----------------------- 249
            G+ K GN++ A  F Y M      PN V + +L+ G                       
Sbjct: 687 DGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAI 746

Query: 250 --------FLDIKDSDG-VDKALTLMEEF--GVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
                   FLD    +G ++ AL L      G   + VT++ ++  +   G   +  ++ 
Sbjct: 747 PNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLL 806

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           D M+  G+ PD   +S     Y + G    A  +   M + G+ P+ V+F  +I   C  
Sbjct: 807 DVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLN 866

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            ++ RA+ +   M   G+ P   TY +L+
Sbjct: 867 GELDRALQLRNDMMLRGLKPTQSTYHSLM 895



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 155/339 (45%), Gaps = 7/339 (2%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G    A  + + +I++G  P   TY  L+A L    R       I+ +     + D + 
Sbjct: 553 EGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELC 612

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           + A++    + G + EA+   Q+M   G +    +Y  LI G  N    +    L +L+ 
Sbjct: 613 YTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALN----QNDRILFELLR 668

Query: 127 Q--DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           +   K ++P++  Y IL+  +    ++++A+   Y M+  G  P++VTY  L     + G
Sbjct: 669 EMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAG 728

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
               A+ +   M   +  PN  T G  +    KEGNME+A++    M +     N V +N
Sbjct: 729 YVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYN 787

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            LI+G+  I       K L +M   G+ PD +T+ST +  +   G +    ++++ M++ 
Sbjct: 788 ILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQR 847

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
           G++PD  VF+ L       GE  +A  +   M   G+ P
Sbjct: 848 GLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKP 886



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/385 (21%), Positives = 172/385 (44%), Gaps = 2/385 (0%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F+ +I    ++  V + + +   M+D G  P   T + L+     + K  + L+L   + 
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +  VKP+   Y ++V+  C      +A  ++ +   +G     VTYN       +    
Sbjct: 218 -NAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRV 276

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
           + A ++   +    ++ +  T   +V G C+    E  M  +  M EL   P+    + L
Sbjct: 277 WEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGL 336

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I+G + +   +G  + L  + + GV P++  +++++++    G + + + +F  M + G+
Sbjct: 337 IEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGL 396

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+   ++IL  G+ R  +   A      M + G+   V  + ++I+  C   KM+ A  
Sbjct: 397 NPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAEL 456

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           ++++M + G+ P + TY +L+ GY +     +A +L   M  KG+ P   T   +     
Sbjct: 457 LFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLC 516

Query: 427 AIGLAREAKRVLKSAEEDRQSMPNK 451
            I    EA ++     E  + +PN+
Sbjct: 517 QINKMAEASKLFDEMVE-LKILPNE 540



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 35/213 (16%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            +  G   +A   +  +I EG+ P  +TYT LV  L +         L  ++      P+
Sbjct: 689 FIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPN 748

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I +   ++  ++ GN++ A+++   M   G    T TYN LI+GY  +GK +E+ KLL 
Sbjct: 749 HITYGCFLDHLTKEGNMENALQLHNAML-QGSFANTVTYNILIRGYCQIGKFQEAAKLLD 807

Query: 124 LM---------------------------SQD-------KNVKPNDRTYNILVRAWCSKN 149
           +M                           + D       + +KP+   +N L+ A C   
Sbjct: 808 VMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNG 867

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
            ++ A  +   M+  G++P   TY++L    AQ
Sbjct: 868 ELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQ 900



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/265 (19%), Positives = 110/265 (41%), Gaps = 2/265 (0%)

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
           +++  Y +   + D +  +  M++  + P +   ++L+     I+    V +    +   
Sbjct: 160 MLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNA 219

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           GVKPD   ++ ++          K +EI +     G    I  +++   G  ++    +A
Sbjct: 220 GVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEA 279

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             +  S+ + G+  ++V + T++ G C   + +  M + ++M E+G  P+      L+ G
Sbjct: 280 VEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEG 339

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMP 449
             +      A ELL  + + GV P       + +S    G   EA+ +L S   +R   P
Sbjct: 340 LIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAE-LLFSVMAERGLNP 398

Query: 450 NKKD-EIAVESIHRKQNLSASNSTF 473
           N     I ++   R+  L  +   F
Sbjct: 399 NDVTYTILIDGFGRRAKLDVAFYYF 423


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 205/428 (47%), Gaps = 11/428 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +  L+  G+  +A   F+   E    P ++TY T+V     +   ++ + L+ ++   G+
Sbjct: 262 LKALLSAGRLKDACQHFD---EMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGL 318

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + ++ ++ ++I      G V +A+++ + M   G       + T+I G+ + G    + +
Sbjct: 319 ESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARR 378

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M Q + +  +  T+  L+   C    ++EA  V+ +MV  G+  D VTY  L   Y
Sbjct: 379 LFEEM-QKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGY 437

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A ++  EM   +V PN  T   +  G CK+G++  A   L+ M    +  N+
Sbjct: 438 CKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNV 497

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +NSLI G     + +   + +T ME  G + DV T++T++D    +G   +   +  +
Sbjct: 498 YTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQE 557

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  GI+P I  +++L  G+  +G  +  + +L  M +  V PNVV + +++  +C    
Sbjct: 558 MLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKN 617

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+    IY+ M    + PN  TY  L+ G+ +A+    A    Q M EKG+R       L
Sbjct: 618 MKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLR-------L 670

Query: 421 VADSWRAI 428
            A S+ A+
Sbjct: 671 TASSYSAL 678



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 159/352 (45%), Gaps = 3/352 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
              KG    A  +F  + + G     +T+T L+  L R    K    ++ ++   G+  D
Sbjct: 367 FCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVD 426

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +  +I+   + GN+ EA ++  +M      P   TY  L  G    G    + +LL 
Sbjct: 427 VVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLH 486

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  +K ++ N  TYN L+   C   ++E+A  ++ +M A+G + D  TY TL     + 
Sbjct: 487 EMC-NKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKS 545

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           GE  RA  ML EM +  ++P+  T  ++++G+C  G +E   + L  M E  V PN+V +
Sbjct: 546 GEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTY 605

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           NSL+K +   K+     +    M    V P+  T++ ++     A  M +      +M++
Sbjct: 606 NSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIE 665

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV--HPNVVMFTTVIS 353
            G+      +S L +   +  +  +A      MR  G+   P+V  F   IS
Sbjct: 666 KGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDIS 717


>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
 gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
          Length = 709

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 201/394 (51%), Gaps = 3/394 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKS-ILSLISK-VEKDGMKPDSILFNAMINACSESGN 79
           E+G+   L+ Y+ ++ +L +  R  S IL  I + +++D ++ D  L+N +I   +++G+
Sbjct: 227 EDGYPSDLVNYSLIIRSLMKNNRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKAGD 286

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +D+A++    ++ SG    T+T  T+I G GN G+ EE+  + + M +D  ++P  R YN
Sbjct: 287 LDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEM-RDNGLQPRTRAYN 345

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+R +     + +A  VV +M  SG+ P+  TY+ L  AY        A  +L EM+ +
Sbjct: 346 ALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEAS 405

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            V+PN      I++ Y  +G  +   + L  M++  V P+ + +N LI  F      D  
Sbjct: 406 NVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHA 465

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
                 M   G++PD +T++T++D    AG   + +E+F++M++ G  P    F+I+   
Sbjct: 466 MATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINS 525

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           +         +++LT+MR  G+ PN V +TT+I  +  + +   A+   + M   G+ P+
Sbjct: 526 FGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPS 585

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
              Y  LL  Y +     +A      M + G++P
Sbjct: 586 STMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKP 619



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/427 (24%), Positives = 203/427 (47%), Gaps = 3/427 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L+ +    T +TY  L++A  R    +  L+LI ++ +DG   D + ++ +I +  ++  
Sbjct: 190 LLSQKQNLTPLTYNALISACARNNDIEKALNLICRMREDGYPSDLVNYSLIIRSLMKNNR 249

Query: 80  VDEAM--KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT 137
            + ++  KI++++     +     +N +I G+   G  +++L+ L ++ Q   +     T
Sbjct: 250 ANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKAGDLDKALEFLGVV-QGSGLSVKTAT 308

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
              ++    +    EEA  +  +M  +G+QP    YN L R Y + G    AE ++ EM+
Sbjct: 309 LVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEME 368

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
            + V PNE+T  +++  Y      E A   L  M+   V PN  VF+ ++  + D  +  
Sbjct: 369 RSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQ 428

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
              + L  ME+ GV+PD + ++ ++D +     +      FD M+  GIEPD   ++ L 
Sbjct: 429 KTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLV 488

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
             + +AG+  +AE +   M + G  P    F  +I+ + +  +     ++   M   G+ 
Sbjct: 489 DCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLL 548

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           PN  TY TL+  YG++ +   A E L  M+  G++P  +    + +++   GL+ +A   
Sbjct: 549 PNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSA 608

Query: 438 LKSAEED 444
             +  +D
Sbjct: 609 FWAMRDD 615



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 176/357 (49%), Gaps = 1/357 (0%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           T  T++  L    R +   ++  ++  +G++P +  +NA++    ++G + +A  +  +M
Sbjct: 308 TLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEM 367

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
           + SG  P   TY+ LI  YGN  + E +  +L+ M +  NV+PN   ++ ++ ++  K  
Sbjct: 368 ERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEM-EASNVQPNAYVFSRILASYRDKGE 426

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
            ++ + V+ +M  SG++PD + YN L   + ++     A      M +  + P+  T   
Sbjct: 427 WQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNT 486

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           +V  +CK G  + A      M E    P    FN +I  F D +  D V   LT M   G
Sbjct: 487 LVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQG 546

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           + P+ VT++T++D +  +G      E  DDM  AG++P   +++ L   Y + G   +A 
Sbjct: 547 LLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAV 606

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           S   +MR  G+ P+++   ++I+ +    +   A  + + M E  + P++ TY TL+
Sbjct: 607 SAFWAMRDDGLKPSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDVVTYTTLM 663



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/379 (23%), Positives = 185/379 (48%), Gaps = 1/379 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  IF  + + G +P    Y  L+    +    +    ++S++E+ G+ P+   +
Sbjct: 320 GRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTY 379

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +I+A   +   + A  + ++M+ S  +P    ++ ++  Y + G+ +++ ++L+ M +
Sbjct: 380 SLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREM-E 438

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D  V+P+   YN+L+  +   N ++ A     +M++ GI+PD +T+NTL   + + G+  
Sbjct: 439 DSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHD 498

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           RAE++  EM      P   T  I+++ +  +   +D    L  M+   + PN V + +LI
Sbjct: 499 RAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLI 558

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             +      D   + L  M+  G+KP    ++ +++A++  GL  +    F  M   G++
Sbjct: 559 DIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLK 618

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P +   + L   + +     +A  +L  M++  + P+VV +TT++       K  +  S+
Sbjct: 619 PSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDVVTYTTLMKALILVEKFDKVPSV 678

Query: 368 YEKMCEIGINPNLKTYETL 386
           YE+M   G  P+ K    L
Sbjct: 679 YEEMILSGCTPDRKARAML 697



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/405 (23%), Positives = 189/405 (46%), Gaps = 50/405 (12%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           P  +  + + + C+ S ++  A  +   + K + C      Y+ LI   G   K  E+  
Sbjct: 131 PGPLWHSLLKSLCTSSSSIPLAYAVVSWLQKHNLCFSYELLYSILIHALGQSEKLYEAF- 189

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
              L+SQ +N+ P   TYN L+ A    N IE+A N++ +M   G   D V Y+ + R+ 
Sbjct: 190 ---LLSQKQNLTP--LTYNALISACARNNDIEKALNLICRMREDGYPSDLVNYSLIIRSL 244

Query: 181 AQYGETYRA--EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL---------- 228
            +      +  +++  E+  +++  + +    I+ G+ K G+++ A+ FL          
Sbjct: 245 MKNNRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKAGDLDKALEFLGVVQGSGLSV 304

Query: 229 -------------------------YRMKELEVHPNLVVFNSLIKGFLD---IKDSDGVD 260
                                      M++  + P    +N+L++G++    ++D++ V 
Sbjct: 305 KTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFV- 363

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
             ++ ME  GV P+  T+S ++DA+ +A      + +  +M  + ++P+ +VFS +   Y
Sbjct: 364 --VSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASY 421

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
              GE QK   +L  M   GV P+ + +  +I  +     +  AM+ +++M   GI P+ 
Sbjct: 422 RDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDT 481

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            T+ TL+  + +A +  RAEEL + M EKG  P  +T  ++ +S+
Sbjct: 482 ITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSF 526



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 164/342 (47%), Gaps = 40/342 (11%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           V  G   +A ++ + +   G  P   TY+ L+ A    +R++S   ++ ++E   ++P++
Sbjct: 352 VKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNA 411

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG-------------- 110
            +F+ ++ +  + G   +  ++ ++M+DSG +P    YN LI  +G              
Sbjct: 412 YVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDR 471

Query: 111 ---------------------NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
                                  GK + + +L + M  +K   P + T+NI++ ++  + 
Sbjct: 472 MLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEM-MEKGYLPCNTTFNIMINSFGDQE 530

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
             ++  N++  M + G+ P+AVTY TL   Y + G    A + L +M+   ++P+     
Sbjct: 531 RWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYN 590

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL--ME 267
            +++ Y + G  + A+   + M++  + P+L+  NSLI  F   KD   V+  + L  M+
Sbjct: 591 ALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAF--GKDRRDVEAFVVLQYMK 648

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
           E  +KPDVVT++T+M A        K   ++++M+ +G  PD
Sbjct: 649 ENDLKPDVVTYTTLMKALILVEKFDKVPSVYEEMILSGCTPD 690



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 20/97 (20%), Positives = 49/97 (50%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   +A   F  + ++G +P+L+   +L+ A  + +R      ++  ++++ +
Sbjct: 593 LNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGKDRRDVEAFVVLQYMKENDL 652

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKP 97
           KPD + +  ++ A       D+   ++++M  SGC P
Sbjct: 653 KPDVVTYTTLMKALILVEKFDKVPSVYEEMILSGCTP 689


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 222/452 (49%), Gaps = 7/452 (1%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           ++A  ++  ++  G  PT+IT+ T++ +  +    + +  +  ++++  ++   + +N +
Sbjct: 256 NKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 315

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           IN  S+SG ++EA +    M+ SG   T  ++N LI+GY   G  +E+  +   M  +  
Sbjct: 316 INGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEM-LNAG 374

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           + P   TYNI +RA C    I++A  ++  M A    PD V+YNTL   Y +  +   A 
Sbjct: 375 IYPTTSTYNIYIRALCEFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMRKFVEAS 430

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            +  +++   + P+  T   ++ G C+ GN+E A R    M    ++P+++ + +L+KGF
Sbjct: 431 LLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGF 490

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE-PD 309
           +   +     +    M   G+KPD   ++T        G   K   + ++MV      PD
Sbjct: 491 VKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPD 550

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
           + ++++   G  + G  +KA      + + G+ P+ V +TTVI G+    + + A  +Y+
Sbjct: 551 LTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYD 610

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           +M    ++P++ TY  L+ G+ +A +  +A +    M+++GVRP   T   +       G
Sbjct: 611 EMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAG 670

Query: 430 LAREAKRVLKSAEEDRQSMPNKKDEIAVESIH 461
              EA R L   EE+  S PNK     + S H
Sbjct: 671 NIDEAYRYLCKMEEEGIS-PNKYSYTILISKH 701



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 194/398 (48%), Gaps = 6/398 (1%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           F  +I +G  P++     ++  L   +       +   +   G+ P  I FN M+++C +
Sbjct: 227 FEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFK 286

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
           +G+++   KI+ +MK    + +  TYN LI G+   GK EE+ +    M Q         
Sbjct: 287 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDM-QRSGFPVTPY 345

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           ++N L+  +C +   +EAW V  +M+ +GI P   TYN   RA  ++G    A ++L  M
Sbjct: 346 SFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM 405

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
                 P+  +   ++ GY K     +A      +K   ++P++V +N+LI G  +  + 
Sbjct: 406 ----AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNL 461

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           +G  +    M    + PDV+T++T++  +   G +    EI+D+M++ GI+PD + ++  
Sbjct: 462 EGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTR 521

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVH-PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
             G +R G+ +KA  +   M     H P++ ++   I G C    +++A+    K+  +G
Sbjct: 522 TVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVG 581

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           + P+  TY T++ GY E  +   A +L   M  K + P
Sbjct: 582 LVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSP 619



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 114/455 (25%), Positives = 204/455 (44%), Gaps = 32/455 (7%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NIL+      GK  EA      +   G   T  ++  L+    +Q  F     +  ++  
Sbjct: 313 NILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLN 372

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+ P +  +N  I A  E G +D+A ++   M      P   +YNTL+ GY  + K  E
Sbjct: 373 AGIYPTTSTYNIYIRALCEFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMRKFVE 428

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +  L   + +  N+ P+  TYN L+   C   ++E A  +  +M +  I PD +TY TL 
Sbjct: 429 ASLLFDDL-KAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLL 487

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
           + + + G    A ++  EM    ++P+         G  + G+ E A R    M   + H
Sbjct: 488 KGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHH 547

Query: 238 -PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGK 293
            P+L ++N  I G   + +   ++KA+    +    G+ PD VT++T++  +   G    
Sbjct: 548 APDLTIYNVRIDGLCKVGN---LEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKM 604

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
            ++++D+M+   + P +  + +L  G+ +AG  ++A    T M+K GV PNV+    ++ 
Sbjct: 605 ARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLH 664

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G C A  +  A     KM E GI+PN  +Y  L+  + +  +     +L + M +K + P
Sbjct: 665 GMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEP 724

Query: 414 KKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSM 448
              T                 + + K  E+D +SM
Sbjct: 725 DGYT----------------HRALFKHLEKDHESM 743



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 151/320 (47%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +F+ L      P+++TY TL+  L      +    L  ++    + PD I +  ++
Sbjct: 428 EASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLL 487

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
               ++GN+  A +I+ +M   G KP    Y T   G   +G  E++ +L + M  + + 
Sbjct: 488 KGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHH 547

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+   YN+ +   C   ++E+A     K+   G+ PD VTY T+ R Y + G    A  
Sbjct: 548 APDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARD 607

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  EM + ++ P+  T  +++ G+ K G +E A ++   MK+  V PN++  N+L+ G  
Sbjct: 608 LYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMC 667

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
              + D   + L  MEE G+ P+  +++ ++          +  +++ +M+   IEPD +
Sbjct: 668 KAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGY 727

Query: 312 VFSILAKGYVRAGEPQKAES 331
               L K   +  E    +S
Sbjct: 728 THRALFKHLEKDHESMALDS 747



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/338 (19%), Positives = 136/338 (40%), Gaps = 18/338 (5%)

Query: 114 KPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ--PDAV 171
           KPE + +    + +  +VK + + +  ++      + + EA+ V  + +  G+    D +
Sbjct: 134 KPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSINLGMHEIDDLL 193

Query: 172 TYNTLARAYAQ---------YGETYRAEQMLF---EMQNNQVRPNERTCGIIVSGYCKEG 219
                 +  A          Y +   AE+ L    +M      P+ R C I++       
Sbjct: 194 IDGNFDKLVALKLLDLLLWVYTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSR 253

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
            M  A      M    + P ++ FN+++       D + VDK    M+   ++   VT++
Sbjct: 254 MMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYN 313

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
            +++ +S +G M + +    DM ++G     + F+ L +GY + G   +A  +   M   
Sbjct: 314 ILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNA 373

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
           G++P    +   I   C   ++  A  +   M      P++ +Y TL+ GY + ++   A
Sbjct: 374 GIYPTTSTYNIYIRALCEFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMRKFVEA 429

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
             L   ++   + P   T   + D     G    A+R+
Sbjct: 430 SLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRL 467


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 206/449 (45%), Gaps = 18/449 (4%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G +P L+TY  ++ AL +  +    +    ++      PD   ++ ++N   +   VDE
Sbjct: 168 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 227

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+ +  +M+  GC P   T+N LI      G    + KL+  M   K   PN+ TYN L+
Sbjct: 228 AVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFL-KGCVPNEVTYNTLI 286

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
              C K  +++A +++ KMV+S   P+ VTY T+     +         +L  M+    +
Sbjct: 287 HGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQK 346

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
            NE     ++SG  KEG  E+A+R    M E    PN+VV+ + I G    +  D  +  
Sbjct: 347 ANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDI 406

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           L  M   G  P+  T+S++M  +   G   K   ++ +M+   +  ++   S+L  G   
Sbjct: 407 LQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCE 466

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI-YEKMC-EIGINPNL 380
           +G  ++A ++ T M   G+ P+VV ++++I G C+   + + + + YE  C E    P++
Sbjct: 467 SGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDV 526

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA-IGLAREAKRVLK 439
            TY  L           RA +LL  M ++G  P   T  +  ++ R  I   ++ +  L 
Sbjct: 527 VTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFL- 585

Query: 440 SAEEDRQSMPNKKDEIAVESIHRKQNLSA 468
                        DE+ V  + R++ LSA
Sbjct: 586 -------------DELVVRLLKRERKLSA 601



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/498 (24%), Positives = 233/498 (46%), Gaps = 10/498 (2%)

Query: 10  PHEAHYIFNCLIEEGH-RPTLITYTTLVAALTRQKRFKSILSLISKV---EKDGMKPDSI 65
           P EA   F+ +  + H + T+ ++ +++  + ++  F         V      G +P+ +
Sbjct: 116 PGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLL 175

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            +N +I A  + G +D A+  F++M    C P   TY+TL+ G     + +E++ LL  M
Sbjct: 176 TYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEM 235

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
            Q +   PN  T+N+L+ A      +  A  +V  M   G  P+ VTYNTL       G+
Sbjct: 236 -QAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 294

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
             +A  +L +M +++  PN+ T G I++G  K+   ED +  L  M+E     N  +++S
Sbjct: 295 LDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSS 354

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           LI G      S+   +    M E G KP+VV +   +D         + ++I  +M+  G
Sbjct: 355 LISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKG 414

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
             P+   +S L KG+ + G+ QKA  +   M    +  NVV  + +++G C + +++ A+
Sbjct: 415 FLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREAL 474

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM--EEKGVRPKKSTIQLVAD 423
           +++  M   G+ P++  Y +++ G  +     +  +L   M  +E   RP   T  ++ +
Sbjct: 475 TVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFN 534

Query: 424 SW-RAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFL-QIPGVVS 481
           +  R   L R A  +L S  ++     +    I +E++  + N       FL ++   + 
Sbjct: 535 ALCRQDNLTR-AIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLL 593

Query: 482 SEHNGSSAAKIRSQIVLR 499
                 SA +I  +++LR
Sbjct: 594 KRERKLSALRIVEEMLLR 611



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 91/377 (24%), Positives = 173/377 (45%), Gaps = 45/377 (11%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L  + +  EA ++ + +  EG  P  +T+  L+ AL++         L+  +   G 
Sbjct: 216 MNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGC 275

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG------------ 108
            P+ + +N +I+     G +D+A+ + +KM  S C P   TY T+I G            
Sbjct: 276 VPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVH 335

Query: 109 ----------------YGNV-------GKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
                           Y ++       GK E +++L + M++ K  KPN   Y   +   
Sbjct: 336 ILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAE-KGCKPNVVVYGAFIDGL 394

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C     +EA +++ +M++ G  P+A TY++L + + + G++ +A  +  EM +  +R N 
Sbjct: 395 CRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNV 454

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
             C ++++G C+ G + +A+     M    + P++V ++S+IKG  D+     VDK L L
Sbjct: 455 VCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDV---GSVDKGLKL 511

Query: 266 MEEFGV-----KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
             E        +PDVVT++ + +A      + +  ++ + M+  G +PD    +I  +  
Sbjct: 512 FYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 571

Query: 321 V-RAGEPQKAESILTSM 336
             R   PQ     L  +
Sbjct: 572 RERINPPQDGRLFLDEL 588



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 161/358 (44%), Gaps = 3/358 (0%)

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
           ++  +MK  G   T + +  + K  G    P E++     M+ D + K   +++N ++  
Sbjct: 86  QVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNV 145

Query: 145 WCSKNSIEEAWNV---VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
              +     A+     V+   + G QP+ +TYN + +A  + G+  RA     EM     
Sbjct: 146 IIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNC 205

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            P+  T   +++G CKE  +++A+  L  M+     PN V FN LI       D     K
Sbjct: 206 NPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAK 265

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            +  M   G  P+ VT++T++      G + K   + + MV +   P+   +  +  G V
Sbjct: 266 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLV 325

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           +    +    IL SM + G   N  +++++ISG     K + A+ ++++M E G  PN+ 
Sbjct: 326 KQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVV 385

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            Y   + G    ++P  AE++LQ M  KG  P   T   +   +   G +++A  V K
Sbjct: 386 VYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWK 443


>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
          Length = 414

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 177/392 (45%), Gaps = 2/392 (0%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G  PD+   + ++++C+ +  +D +  +  K  + GC+     YN L+      G+  + 
Sbjct: 6   GYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDV 65

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           + L +   QD+   P+  ++N++++  C    +++A  +V +M   G  PD VT+N L  
Sbjct: 66  VALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVD 125

Query: 179 AYAQYGETYRAEQMLFEMQNNQV-RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
              +  E  R  ++L  +Q + V  PN  T   ++SGYCK G +EDAM     M    + 
Sbjct: 126 GLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIM 185

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           PN V +N LI G+  + D     +    M      PDVVTFS+++D +   G +     I
Sbjct: 186 PNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRI 245

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR-KYGVHPNVVMFTTVISGWC 356
           + DM +  I+P+++ FSI+     +     +A  +L  +  +  + P   ++  VI   C
Sbjct: 246 WSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLC 305

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
              K+  A  I + M E G  P+  TY  L+ GY    +   A      M E G  P   
Sbjct: 306 KCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSI 365

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEEDRQSM 448
           T+          G+  E   V++ A     S+
Sbjct: 366 TVNCFISCLLKAGMPNEVDHVMRLASGGASSI 397



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 160/337 (47%), Gaps = 8/337 (2%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM-KPDSILFNAMINACSESGNV 80
           E G R     Y  L+++L  + R   +++L  +  +D +  PD   FN +I      G V
Sbjct: 39  EFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQV 98

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
            +A+++ ++M + GC P T T+N L+ G     +     ++L+ + +D    PN  T+  
Sbjct: 99  QKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTS 158

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           ++  +C    +E+A  V   MVASGI P+ VTYN L   Y + G+   A ++  +M   +
Sbjct: 159 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 218

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
             P+  T   ++ GYC+ G ++DA+R    M +  + PN+  F+ +I        S   D
Sbjct: 219 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRS---D 275

Query: 261 KALTLMEEFGVKPDVV----TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           +A+ L+ E  ++PD+      ++ ++D     G + +   I   M + G  PD + ++IL
Sbjct: 276 EAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTIL 335

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
             GY       +A      M + G  P+ +     IS
Sbjct: 336 IIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFIS 372



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 158/334 (47%), Gaps = 12/334 (3%)

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M+      P+ R  + LV +    N ++ +  ++ K    G + +A  YN L  +    G
Sbjct: 1   MTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRG 60

Query: 185 ETYRAEQMLFE--MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
             +     LFE  +Q+    P+  +  +++ G C+ G ++ A+  + RM E    P+ V 
Sbjct: 61  RVHDVVA-LFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVT 119

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGV-KPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            N L+ G     +     + L  ++  GV  P+VVTF++++  +  AG +     +++DM
Sbjct: 120 HNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDM 179

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           V +GI P+   +++L  GY + G+   A  +   M +    P+VV F+++I G+C   ++
Sbjct: 180 VASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQL 239

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL- 420
             A+ I+  M +  I PN+ T+  ++  +   KQ  R++E + ++ E  +RP  +     
Sbjct: 240 DDALRIWSDMAQHRIQPNVYTFSIII--HSLCKQN-RSDEAIGLLNELNLRPDIAPQAFI 296

Query: 421 ---VADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
              V D     G   EA  + K  EE +   P+K
Sbjct: 297 YNPVIDVLCKCGKVDEANLIRKGMEE-KGCRPDK 329



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/275 (19%), Positives = 117/275 (42%), Gaps = 72/275 (26%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P ++T+T++++   +  + +  +++ + +   G+ P+++ +N +IN   + G++  A+++
Sbjct: 151 PNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEV 210

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           +Q+M    C P   T+++LI GY   G+ +++L++   M+Q + ++PN  T++I++ + C
Sbjct: 211 YQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHR-IQPNVYTFSIIIHSLC 269

Query: 147 SKNSIEEAW-----------------------------------NVVYK-MVASGIQPDA 170
            +N  +EA                                    N++ K M   G +PD 
Sbjct: 270 KQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDK 329

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
            TY                                    I++ GYC +  + +A+ F + 
Sbjct: 330 YTYT-----------------------------------ILIIGYCMKSRISEAIMFFHE 354

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
           M E    P+ +  N  I   L     + VD  + L
Sbjct: 355 MVEAGCSPDSITVNCFISCLLKAGMPNEVDHVMRL 389



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 3/89 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L   GK  EA+ I   + E+G RP   TYT L+     + R    +    ++ + G 
Sbjct: 301 IDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGC 360

Query: 61  KPDSILFNAMINACSESG---NVDEAMKI 86
            PDSI  N  I+   ++G    VD  M++
Sbjct: 361 SPDSITVNCFISCLLKAGMPNEVDHVMRL 389



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 23/100 (23%), Positives = 42/100 (42%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P    Y  ++  L +  +      +   +E+ G +PD   +  +I        + EA+  
Sbjct: 292 PQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMF 351

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F +M ++GC P + T N  I      G P E   +++L S
Sbjct: 352 FHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVMRLAS 391


>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
 gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
          Length = 823

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 201/393 (51%), Gaps = 2/393 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV- 80
           +E +   +  YT+L++ L+R +RF   ++L   ++++G + +++ +N M++   + G+  
Sbjct: 206 DESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSW 265

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           D    +FQ+MKD    P   TYNT+I         +E+L+L Q M ++    PN  TYN 
Sbjct: 266 DRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEM-KEAGCCPNRVTYNA 324

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+  +      +EA  ++ +M A+GI P+ VTYN L  AYA+ G    A  +   + +  
Sbjct: 325 LLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKG 384

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           + P+E T   ++S + +    E A+     M++    PN+V +N LI  +  ++  D + 
Sbjct: 385 LCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMM 444

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           K    M+E    PD+VT+++++ ++ + G++ +   +F +M +AG  P +  F+IL + Y
Sbjct: 445 KVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECY 504

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            R G    +  I   + + G+ P V  F  +++      + Q+   + ++M E G+  + 
Sbjct: 505 GRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSD 564

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             +  L+  Y  + Q ++  + +  +E+   +P
Sbjct: 565 ACHAGLIHSYANSGQFFQLRKYIDELEKSAKQP 597



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/422 (23%), Positives = 200/422 (47%), Gaps = 8/422 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA  +   L+ +G  P   TY TL++A  R +R++  L   +++ K    P+ + +
Sbjct: 368 GLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTY 427

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I+       +D+ MK+F+ M++  C P   T+N+L+K +GN G   E   + + M +
Sbjct: 428 NILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKR 487

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                P   T+NIL+  +     ++ + ++   ++ +G+QP   T+  L  + A+ G   
Sbjct: 488 -AGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQ 546

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           + E++  EM    ++ ++     ++  Y   G      +++    ELE      +   L 
Sbjct: 547 QCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYI---DELEKSAKQPLSGILC 603

Query: 248 KGFLDIKDSDGVDK----ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           K F+      G+D     AL  + + G  PD+  F+ ++   +  G + +  ++ +++ K
Sbjct: 604 KTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRK 663

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           A ++PD   ++ L   Y R G   KAE +++ MR+ G  PN++ + T++  +    +M  
Sbjct: 664 AQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDD 723

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  ++  M    + P+  T+ TL+  Y        A  +++ M E G +P + T + + D
Sbjct: 724 AARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLD 783

Query: 424 SW 425
            +
Sbjct: 784 GY 785



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 107/440 (24%), Positives = 200/440 (45%), Gaps = 3/440 (0%)

Query: 6   GKGKPH-EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           GKG  H EA  +   +   G  P ++TY  L+AA  R        +L   +   G+ PD 
Sbjct: 330 GKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDE 389

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
             +  +I+A + +   ++A++ F +M+ + C P   TYN LI  YG + K ++ +K+ + 
Sbjct: 390 FTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKF 449

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M Q+KN  P+  T+N L++++ +   + E  NV  +M  +G  P   T+N L   Y + G
Sbjct: 450 M-QEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCG 508

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
               +  +   +    ++P   T   +++   +EG  +   +    M E  +  +     
Sbjct: 509 YVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHA 568

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKP-DVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            LI  + +      + K +  +E+   +P   +   T + A+   G+  + Q   + +  
Sbjct: 569 GLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQLYD 628

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G  PDI VF+ +     + G  ++A  +L  +RK  + P+ V +  ++S +       +
Sbjct: 629 NGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYK 688

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  +  +M   G  PNL TY TLL+ Y +  +   A  +   M    VRP   T   +  
Sbjct: 689 AEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVG 748

Query: 424 SWRAIGLAREAKRVLKSAEE 443
           S+ ++GL +EA  V++   E
Sbjct: 749 SYSSLGLYKEALSVIEYMTE 768



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/432 (22%), Positives = 191/432 (44%), Gaps = 8/432 (1%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
            EA  +F  + E G  P  +TY  L+    +    K    L+ ++E  G+ P+ + +N +
Sbjct: 301 QEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNEL 360

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           I A + +G  DEA  + + +   G  P   TY TLI  +    + E++L+    M +  N
Sbjct: 361 IAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRK-TN 419

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
             PN  TYNIL+  +     +++   V   M      PD VT+N+L +++   G      
Sbjct: 420 CTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVS 479

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            +  EM+     P   T  I++  Y + G ++ ++     +    + P +  F +L+   
Sbjct: 480 NVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASL 539

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
                    +K    M E G++      + ++ +++++G   + ++  D++ K+  +P  
Sbjct: 540 AREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQP-- 597

Query: 311 HVFSILAK----GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            +  IL K     Y + G   +A+  L  +   G  P++ +F  +IS       ++RA+ 
Sbjct: 598 -LSGILCKTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVK 656

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           + E++ +  + P+  TY  L+  YG     ++AEE++  M   G  P   T   +  S+ 
Sbjct: 657 LLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYT 716

Query: 427 AIGLAREAKRVL 438
             G   +A RV 
Sbjct: 717 KHGRMDDAARVF 728



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 131/273 (47%), Gaps = 4/273 (1%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           I+  L+  G +PT+ T+  L+A+L R+ R++    +  ++ + G++        +I++ +
Sbjct: 516 IYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYA 575

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTY-NTLIKGYGNVGKPEES-LKLLQLMSQDKNVKP 133
            SG   +  K   +++ S  +P +     T +  Y   G   E+ L L QL   D    P
Sbjct: 576 NSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQLY--DNGHSP 633

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           + + +N ++     +  IE A  ++ ++  + ++PD VTYN L   Y + G  Y+AE+++
Sbjct: 634 DIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVM 693

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
            EM+     PN  T   ++  Y K G M+DA R    M    V P+   FN+L+  +  +
Sbjct: 694 SEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSL 753

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
                    +  M E G +P  +TF  ++D ++
Sbjct: 754 GLYKEALSVIEYMTEHGCQPTQITFKALLDGYN 786



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 141/317 (44%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           E   +F  +   G+ P + T+  L+    R       + +   + + G++P    F A++
Sbjct: 477 EVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALM 536

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
            + +  G   +  K+ Q+M ++G + + + +  LI  Y N G+  +  K +  + +    
Sbjct: 537 ASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQ 596

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
             +       V A+C      EA   + ++  +G  PD   +N +    A+ G   RA +
Sbjct: 597 PLSGILCKTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVK 656

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L E++  Q++P+  T   ++S Y +EG    A   +  M+     PNL+ +N+L+  + 
Sbjct: 657 LLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYT 716

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                D   +    M    V+PD  TF+T++ ++SS GL  +   + + M + G +P   
Sbjct: 717 KHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQI 776

Query: 312 VFSILAKGYVRAGEPQK 328
            F  L  GY R   P +
Sbjct: 777 TFKALLDGYNRNASPSR 793



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 57/115 (49%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M++   +G  ++A  + + +   G  P LITY TL+ + T+  R      +   +    +
Sbjct: 677 MSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARV 736

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKP 115
           +PD+  FN ++ + S  G   EA+ + + M + GC+PT  T+  L+ GY     P
Sbjct: 737 RPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGYNRNASP 791


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 192/385 (49%), Gaps = 8/385 (2%)

Query: 10  PHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNA 69
           P  +  +F  LIE    P   T+  LV     +      L+ +S ++  G+ PD++ +N 
Sbjct: 189 PQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNT 248

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK 129
           ++NA    G + EA  +  +MK  G  PT  TYNTL+  +  +G  +++ K+++ M+   
Sbjct: 249 LLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTA-Y 307

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM-VASGIQPDAVTYNTLARAYAQYGETYR 188
             +P+ RTYN+L    C    ++EA+ +  +M   S   PD VTYNTL  A  ++  +  
Sbjct: 308 GFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSD 367

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A ++L EM++  V+P   T  I+V   CKEG +E+A+  L ++ E  + P+++ +N+LI 
Sbjct: 368 ALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427

Query: 249 GFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
            +     +  V KA TLM+E    G+K D  T +T++            +E+     + G
Sbjct: 428 AYC---KAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRG 484

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
             PD   +  +   Y +   P+ A  +   M +  + P++  + T+I G C   +++ A+
Sbjct: 485 FVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAI 544

Query: 366 SIYEKMCEIGINPNLKTYETLLWGY 390
               ++ E G+ P+  TY  ++  Y
Sbjct: 545 DKLNELVEKGLVPDETTYNIIIHAY 569



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 208/447 (46%), Gaps = 39/447 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    KG   EA  +   +  +G  PT  TY TLV+A  R    K    ++  +   G 
Sbjct: 250 LNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGF 309

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKD-SGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +PD   +N +     ++G VDEA ++  +M+  S   P   TYNTL+          ++L
Sbjct: 310 EPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDAL 369

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +LL+ M +DK VKP   T+NI+V++ C +  +EEA   + K+   G+ PD +TYNTL  A
Sbjct: 370 RLLEEM-RDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDA 428

Query: 180 YAQYGETYRAEQMLFEMQNNQVR-----------------------------------PN 204
           Y + G   +A  ++ EM    ++                                   P+
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD-SDGVDKAL 263
           E + G +++ Y KE N E A+R   +M E ++ P++  +N+LIKG   ++   + +DK  
Sbjct: 489 EVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLN 548

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            L+E+ G+ PD  T++ I+ A+   G +       + MV+   +PD+   + L  G    
Sbjct: 549 ELVEK-GLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLH 607

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+  KA  +  S  + G   +V+ + T+I   C    +  A+  ++ M   G+ P+  TY
Sbjct: 608 GKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTY 667

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKG 410
             +L    EA +   A  +L  + + G
Sbjct: 668 NVVLSALSEAGRSEEAHNMLHKLADSG 694



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 176/387 (45%), Gaps = 2/387 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA      + EEG  P +ITY TL+ A  +        +L+ ++   G+K D
Sbjct: 394 LCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMD 453

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +   N ++    +    ++A ++       G  P   +Y T++  Y     PE +L+L  
Sbjct: 454 TFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWD 513

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + K + P+  TYN L++  C    ++EA + + ++V  G+ PD  TYN +  AY + 
Sbjct: 514 QMIERKLI-PSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKE 572

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A +   +M  N  +P+  TC  +++G C  G ++ A++      E     +++ +
Sbjct: 573 GDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITY 632

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+LI+    + D D        ME  G++PD  T++ ++ A S AG   +   +   +  
Sbjct: 633 NTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLAD 692

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV-MFTTVISGWCNAVKMQ 362
           +G         +L        + ++ E    +        N +  +   ++G C   +++
Sbjct: 693 SGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLK 752

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWG 389
            A ++ ++M + G+  +  TY TL+ G
Sbjct: 753 EAKAVLDEMMQKGMPVDSSTYITLMEG 779



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 86/360 (23%), Positives = 162/360 (45%), Gaps = 44/360 (12%)

Query: 97  PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN---------------------- 134
           PT+   +  +  Y  +  P  + +LL  + + + V+P+                      
Sbjct: 133 PTSPLADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQAS 192

Query: 135 ---------------DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
                            T+N+LV   CSK ++ +A   +  M   G+ PDAVTYNTL  A
Sbjct: 193 LDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNA 252

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + + G    A  +L  M+ + + P + T   +VS + + G ++ A + +  M      P+
Sbjct: 253 HCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPD 312

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF----GVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           L  +N L  G      +  VD+A  L +E        PDVVT++T++DA           
Sbjct: 313 LRTYNVLAVGLC---QAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDAL 369

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
            + ++M   G++P +   +I+ K   + G+ ++A   L  + + G+ P+V+ + T+I  +
Sbjct: 370 RLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAY 429

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C A  + +A ++ ++M   G+  +  T  T+L+   + K+   AEELL    ++G  P +
Sbjct: 430 CKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDE 489



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 16/184 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L   GK  +A  +F   +E+G +  +ITY TL+ ++ +     + L     +E  G+
Sbjct: 601 MNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGL 660

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG--------NV 112
           +PD+  +N +++A SE+G  +EA  +  K+ DSG K + S    L+K           + 
Sbjct: 661 QPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG-KLSQSFACPLLKPSSADEADVKEHE 719

Query: 113 GKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT 172
           GKPE         S +K       TY   +   C+   ++EA  V+ +M+  G+  D+ T
Sbjct: 720 GKPEAE-------SSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSST 772

Query: 173 YNTL 176
           Y TL
Sbjct: 773 YITL 776


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 219/471 (46%), Gaps = 50/471 (10%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTR----------------------- 41
           V   +PH A  IFN +    +RP L+T  TL+ +L R                       
Sbjct: 151 VQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVV 210

Query: 42  ---------------QKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
                          + + K  L  ++K+ + G  PD++ +N +++A  +   + EA  +
Sbjct: 211 PNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDL 270

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
              MK  G  P   TYN L+ GY  +G  +E+ K++++M+++ N+ P   TYN+LV  +C
Sbjct: 271 LLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRN-NLLPTVWTYNMLVNGFC 329

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           +   I+EA+ +  +M    + PD VTYNTL    +Q+ ++     ++ EM    V+ N  
Sbjct: 330 NDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAV 389

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T  II+   CK+GNM +A   L +M+E  + P+ V +N+LI  +     +  + KA  +M
Sbjct: 390 TYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYC---KAGKMGKAFRMM 446

Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           +E    G+K D  T +TI+        + +   +     K G   D   + IL  GY + 
Sbjct: 447 DEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKD 506

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
            +  +A ++   M++  + P+ + + +VI G C + K+ +A+    +M E G+ P+  TY
Sbjct: 507 EKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTY 566

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
             ++ G+       +A +    M E   +P   T  ++       GL RE 
Sbjct: 567 NIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLR-----GLCREG 612



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 113/438 (25%), Positives = 210/438 (47%), Gaps = 7/438 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L+ +    EA  +   +  +G  P   TY  LV    R    K    +I  + ++ +
Sbjct: 255 LDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNL 314

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P    +N ++N     G +DEA +I  +M+     P   TYNTLI G        E   
Sbjct: 315 LPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYS 374

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L++ M + K VK N  TYNI+++  C K ++ EA   + KM  +G+ PD VTYNTL  AY
Sbjct: 375 LIEEMDK-KGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAY 433

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+  +A +M+ EM +  ++ +  T   I+   C E  +++A   L    +     + 
Sbjct: 434 CKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDE 493

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +  LI G+   KD  G D+AL L   M+E  + P  +T+++++     +  + +  + 
Sbjct: 494 VSYGILILGYF--KDEKG-DRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDK 550

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            ++M++ G+ PD   ++I+  G+   G  +KA      M +    P+V     ++ G C 
Sbjct: 551 LNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCR 610

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              +++A+ ++  +   G + ++ TY T++    +  +   A +LL  ME K + P + T
Sbjct: 611 EGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYT 670

Query: 418 IQLVADSWRAIGLAREAK 435
            +++  +    G  +EA+
Sbjct: 671 YKVIIAALTDAGRIKEAE 688



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/404 (25%), Positives = 187/404 (46%), Gaps = 1/404 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA  +   +      PT+ TY  LV       +      +  ++EK  + PD + +
Sbjct: 297 GLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTY 356

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I+ CS+  +  E   + ++M   G K    TYN ++K     G   E+   L  M +
Sbjct: 357 NTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKM-E 415

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  + P+  TYN L+ A+C    + +A+ ++ +M + G++ D  T NT+        +  
Sbjct: 416 ENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLD 475

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +L          +E + GI++ GY K+   + A+     MKE ++ P+ + +NS+I
Sbjct: 476 EAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVI 535

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G    +  D     L  M E G+ PD  T++ I+  +   G + K  +  ++M++   +
Sbjct: 536 GGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFK 595

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD++  +IL +G  R G  +KA  +  ++   G   +VV + T+IS  C   K + A  +
Sbjct: 596 PDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDL 655

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
             +M    + P+  TY+ ++    +A +   AEE    M E G+
Sbjct: 656 LTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGI 699



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 188/385 (48%), Gaps = 14/385 (3%)

Query: 34  TLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS 93
           +L+ +     R   +  LI    +D  +P   L +  I A  +      A +IF KMK  
Sbjct: 110 SLLISFISSDRQHELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRL 169

Query: 94  GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK----PNDRTYNILVRAWCSKN 149
             +P   T NTL+     V  P  S  LL       ++K    PN  ++NIL+  +C ++
Sbjct: 170 NYRPNLLTCNTLMNSL--VRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLES 227

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            +++A + V KM   G  PD V+YNT+  A  +      A  +L +M++  + PN+ T  
Sbjct: 228 KVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYN 287

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG-VDKALTL--- 265
           ++V GYC+ G +++A + +  M    + P +  +N L+ GF +    DG +D+A  +   
Sbjct: 288 MLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCN----DGKIDEAFRIRDE 343

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           ME+  V PDVVT++T++D  S      +   + ++M K G++ +   ++I+ K   + G 
Sbjct: 344 MEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGN 403

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A + L  M + G+ P+ V + T+I  +C A KM +A  + ++M   G+  +  T  T
Sbjct: 404 MTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNT 463

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKG 410
           +L      K+   A  LL    ++G
Sbjct: 464 ILHCLCVEKKLDEAYNLLCSASKRG 488



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 189/386 (48%), Gaps = 9/386 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N     GK  EA  I + + +    P ++TY TL+   ++ +    + SLI +++K G+
Sbjct: 325 VNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGV 384

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K +++ +N ++    + GN+ EA     KM+++G  P   TYNTLI  Y   GK  ++ +
Sbjct: 385 KCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFR 444

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           ++  M+  K +K +  T N ++   C +  ++EA+N++      G   D V+Y  L   Y
Sbjct: 445 MMDEMTS-KGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGY 503

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +  RA  +  EM+  Q+ P+  T   ++ G C+   ++ A+  L  M E  + P+ 
Sbjct: 504 FKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDE 563

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             +N +I GF        V+KA      M E   KPDV T + ++      G++ K  ++
Sbjct: 564 TTYNIIIHGFC---LEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKL 620

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           F+ +V  G + D+  ++ +     + G+ + A  +LT M    + P+   +  +I+   +
Sbjct: 621 FNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTD 680

Query: 358 AVKMQRAMSIYEKMCEIGI--NPNLK 381
           A +++ A     KM E GI  + NLK
Sbjct: 681 AGRIKEAEEFTLKMVESGIVHDQNLK 706



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 176/383 (45%), Gaps = 13/383 (3%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG   EA    + + E G  P  +TY TL+ A  +  +      ++ ++   G+K D+  
Sbjct: 401 KGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWT 460

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            N +++       +DEA  +       G      +Y  LI GY    K + +L L   M 
Sbjct: 461 LNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEM- 519

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +++ + P+  TYN ++   C    +++A + + +M+ +G+ PD  TYN +   +   G  
Sbjct: 520 KERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNV 579

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A Q   EM  N  +P+  TC I++ G C+EG +E A++    +       ++V +N++
Sbjct: 580 EKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTI 639

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I         +     LT ME   + PD  T+  I+ A + AG + + +E    MV++GI
Sbjct: 640 ISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGI 699

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
             D +         ++ G   K +++LTS          + ++  I+  CN  K + AM 
Sbjct: 700 VHDQN---------LKLG---KGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMH 747

Query: 367 IYEKMCEIGINPNLKTYETLLWG 389
           ++ ++ + G+  N  TY  L+ G
Sbjct: 748 LFVEVTKEGVALNKYTYLNLMEG 770



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 142/282 (50%), Gaps = 5/282 (1%)

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG---YCKEGNMED 223
           +P     +T   AY Q  + + A Q+  +M+    RPN  TC  +++    Y    ++  
Sbjct: 137 EPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILL 196

Query: 224 AMRFLYRMKELEVHPNLVVFNSLIKGF-LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIM 282
           A + L    +L V PN   FN LI G+ L+ K  D +D  +  M EFG  PD V+++TI+
Sbjct: 197 ARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALD-WVNKMSEFGCVPDTVSYNTIL 255

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
           DA     L+ + +++  DM   G+ P+ H +++L  GY R G  ++A  ++  M +  + 
Sbjct: 256 DALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLL 315

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           P V  +  +++G+CN  K+  A  I ++M ++ + P++ TY TL+ G  + +       L
Sbjct: 316 PTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSL 375

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           ++ M++KGV+    T  ++       G   EA   L   EE+
Sbjct: 376 IEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEEN 417


>gi|356574876|ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Glycine max]
          Length = 589

 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 188/403 (46%), Gaps = 1/403 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            + KG   EA    N ++  G  P  ITY  ++  L +  R +S L L+  +   G  PD
Sbjct: 175 FIRKGLVDEACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPD 234

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +I +N++I    + GN ++A+  ++     GC P   TY  LI+          +L++L+
Sbjct: 235 AITYNSIIRCLFDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLE 294

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M+ +    P+  TYN LV     +   E+   V+  +++ G+QP+AVTYNTL  +   +
Sbjct: 295 DMAME-GCYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINH 353

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G     + +L  M      P   T  I+++G CK G ++ A+ F   M      P+++ +
Sbjct: 354 GYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITY 413

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+L+ G       D   + L L+      P +VT++ ++D  +  G M   +E++D+MV 
Sbjct: 414 NTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVD 473

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GI PD    S L  G+ RA + ++A  +L  M           +  VI G C   K+  
Sbjct: 474 KGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQKKVDI 533

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
           A+ + + M +   NP+ + Y  L+    +      A +L Q +
Sbjct: 534 AIQVLDLMVKGQCNPDERIYSALIKAVADGGMLKEANDLHQTL 576



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 163/358 (45%), Gaps = 6/358 (1%)

Query: 78  GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT 137
           G VDEA K   KM  SG  P T TYN +I G    G+   +L L++ MS      P+  T
Sbjct: 179 GLVDEACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSL-SGCSPDAIT 237

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           YN ++R    K +  +A N     +  G  P  +TY  L     +Y    RA ++L +M 
Sbjct: 238 YNSIIRCLFDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMA 297

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
                P+  T   +V+   K+G  ED    +  +    + PN V +N+LI   ++    D
Sbjct: 298 MEGCYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWD 357

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
            VD  L +M E    P  VT++ +++    +GL+ +    +  MV     PDI  ++ L 
Sbjct: 358 EVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLL 417

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            G  + G   +   +L  +      P +V +  VI G      M+ A  +Y++M + GI 
Sbjct: 418 SGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGII 477

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           P+  T+ +L WG+  A Q   A ELL+ M  K  R K +  + V      +GL R+ K
Sbjct: 478 PDEITHSSLTWGFCRADQLEEATELLKEMSMKEQRIKNTAYRCV-----ILGLCRQKK 530



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 158/353 (44%), Gaps = 17/353 (4%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  KG  ++A   +   + +G  P LITYT L+  + +       L ++  +  +G  PD
Sbjct: 245 LFDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPD 304

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N+++N  S+ G  ++   +   +   G +P   TYNTLI    N G  +E   +L+
Sbjct: 305 IVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILK 364

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           +M++  +  P   TYNIL+   C    ++ A +    MV     PD +TYNTL     + 
Sbjct: 365 IMNETSS-PPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKE 423

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G      Q+L  +      P   T  I++ G  + G+ME A      M +  + P+ +  
Sbjct: 424 GFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITH 483

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ-------- 295
           +SL  GF     +D +++A  L++E  +K        I +      ++G C+        
Sbjct: 484 SSLTWGFC---RADQLEEATELLKEMSMKE-----QRIKNTAYRCVILGLCRQKKVDIAI 535

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
           ++ D MVK    PD  ++S L K     G  ++A  +  ++ K+ +    +M 
Sbjct: 536 QVLDLMVKGQCNPDERIYSALIKAVADGGMLKEANDLHQTLIKWKILKKEIML 588



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 132/266 (49%), Gaps = 4/266 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+   +GK  +   +   L+  G +P  +TY TL+ +L     +  +  ++  + +   
Sbjct: 312 VNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSS 371

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  + +N ++N   +SG +D A+  +  M    C P   TYNTL+ G    G  +E ++
Sbjct: 372 PPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQ 431

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL L+    +  P   TYNI++       S+E A  +  +MV  GI PD +T+++L   +
Sbjct: 432 LLNLLV-GTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGF 490

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +   A ++L EM   + R        ++ G C++  ++ A++ L  M + + +P+ 
Sbjct: 491 CRADQLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDE 550

Query: 241 VVFNSLIKGFLD---IKDSDGVDKAL 263
            ++++LIK   D   +K+++ + + L
Sbjct: 551 RIYSALIKAVADGGMLKEANDLHQTL 576



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/398 (21%), Positives = 162/398 (40%), Gaps = 81/398 (20%)

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
           T N +++   + GK   + +L+ +M++   + P+  +   L+R +  K  ++EA   + K
Sbjct: 132 TNNEILQRLCSRGKLTVAARLIDVMARKSQI-PHFPSCTNLIRGFIRKGLVDEACKTLNK 190

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           MV SG  PD +TYN                                   +++ G CK G 
Sbjct: 191 MVMSGGVPDTITYN-----------------------------------MVIGGLCKNGR 215

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD----------------------- 257
           +  A+  +  M      P+ + +NS+I+   D  + +                       
Sbjct: 216 LRSALDLVEDMSLSGCSPDAITYNSIIRCLFDKGNFNQAVNFWRDQLRKGCPPYLITYTV 275

Query: 258 ---------GVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
                    G  +AL ++E+    G  PD+VT++++++  S  G       +  +++  G
Sbjct: 276 LIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHG 335

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           ++P+   ++ L    +  G   + + IL  M +    P  V +  +++G C +  + RA+
Sbjct: 336 MQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAI 395

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           S Y  M     +P++ TY TLL G  +        +LL ++      P   T  +V D  
Sbjct: 396 SFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVID-- 453

Query: 426 RAIGLAREAKRVLKSAEEDRQSMPNK---KDEIAVESI 460
              GLAR     ++SA+E    M +K    DEI   S+
Sbjct: 454 ---GLARLGS--MESAKELYDEMVDKGIIPDEITHSSL 486



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 103/249 (41%), Gaps = 7/249 (2%)

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           +QN+++  NE     I+   C  G +  A R +  M      P+     +LI+GF+    
Sbjct: 126 VQNDEMTNNE-----ILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGL 180

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D   K L  M   G  PD +T++ ++      G +    ++ +DM  +G  PD   ++ 
Sbjct: 181 VDEACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNS 240

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           + +     G   +A +      + G  P ++ +T +I   C      RA+ + E M   G
Sbjct: 241 IIRCLFDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEG 300

Query: 376 INPNLKTYETLL-WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
             P++ TY +L+     + K    A  +L ++   G++P   T   +  S    G   E 
Sbjct: 301 CYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSH-GMQPNAVTYNTLIHSLINHGYWDEV 359

Query: 435 KRVLKSAEE 443
             +LK   E
Sbjct: 360 DDILKIMNE 368


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/459 (24%), Positives = 202/459 (44%), Gaps = 22/459 (4%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG-MKP 62
           L   G+  +A  +   L E G +  +ITY+ ++    +  R    L +   +   G   P
Sbjct: 83  LCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVP 142

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D + FN+++        + EA  +F+ M  +GC+P   +Y+TL+ G    G+ +E+ +L 
Sbjct: 143 DVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLW 202

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           + M + K+  P+   Y   V   C  N + EA +   KMV  G + DAV ++T+     +
Sbjct: 203 EEMVE-KSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCK 261

Query: 183 YGETYRAEQMLFE-----------------MQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
            G    A+  + E                 M +    P+      ++   CK   + D +
Sbjct: 262 KGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGV 321

Query: 226 RFLYRMK---ELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIM 282
               RMK   E    PNL  +N ++      K  D   + +  M  +G+ PDVVT+S ++
Sbjct: 322 LLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALV 381

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
           D     G + +  ++ ++M K G+ PD    + +     +AG+   A S L +M+  G  
Sbjct: 382 DGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGST 441

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           P++V + T++ G C A ++  A++   KM      P++ +Y  ++     + Q   A  +
Sbjct: 442 PDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAI 501

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
            Q M ++GV P       + D     GL   A  +LK++
Sbjct: 502 FQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTS 540



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 122/431 (28%), Positives = 195/431 (45%), Gaps = 30/431 (6%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  EA  ++  ++E+   P L+ YT+ V  L +  R         K+   G 
Sbjct: 186 LDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGS 245

Query: 61  KPDSILF-----------------NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYN 103
           K D++ F                 N MI     SG +DEA K F++M      P+   +N
Sbjct: 246 KADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFN 305

Query: 104 TLIKGYGNVGKPEESLKLLQLMSQDKN--VKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
           TLI       +  + + L Q M   K     PN  TYNI+V   C    ++EA  +V +M
Sbjct: 306 TLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEM 365

Query: 162 VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM 221
              G+ PD VTY+ L     + G+  RA  +L EM    V P+  T   I++   K G +
Sbjct: 366 ANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKV 425

Query: 222 EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTF 278
           + A+  L  MK     P+LV +N+L+ G      +  +D+A+T + +       PDV ++
Sbjct: 426 DYALSHLETMKARGSTPDLVTYNTLLDGLC---KAGRIDEAITFLAKMVAAKCTPDVFSY 482

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG-EPQKAESILTSMR 337
           + I+ A   +G       IF +MVK G+ PD  ++  L  G  R G E    E + TS+ 
Sbjct: 483 TIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLC 542

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
           K    P+ VM   V+ G C A K + A  + E+M + G   +  TY  ++ G  +  +  
Sbjct: 543 K----PDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVD 598

Query: 398 RAEELLQVMEE 408
           +A +L+    E
Sbjct: 599 KARQLVDDASE 609



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/447 (23%), Positives = 196/447 (43%), Gaps = 55/447 (12%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           ++G++ ++ TY   + AL +    +       ++++ G  PD   ++ ++    ++G +D
Sbjct: 31  QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +A ++  ++++SG K    TY+ +I G     + +++L++ + MS      P+  T+N L
Sbjct: 91  KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSL 150

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           ++  CS   + EA+ +   M  +G +P+ ++Y+TL     + G    A ++  EM     
Sbjct: 151 LKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSC 210

Query: 202 RPNERTCGIIVSGYCK----------------EGNMEDAMRF------------------ 227
            P+       V+G CK                +G+  DA+ F                  
Sbjct: 211 VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQN 270

Query: 228 -----LYRMKELEVH-------------PNLVVFNSLIKGFLDIKD-SDGV--DKALTLM 266
                L R   L+               P+  +FN+LI      K   DGV   + +  M
Sbjct: 271 QMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSM 330

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           +EF   P++ T++ ++D    A  + + QE+ ++M   G+ PD+  +S L  G  + G+ 
Sbjct: 331 KEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKL 390

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +A  +L  M K GV P+     ++++    A K+  A+S  E M   G  P+L TY TL
Sbjct: 391 DRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTL 450

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRP 413
           L G  +A +   A   L  M      P
Sbjct: 451 LDGLCKAGRIDEAITFLAKMVAAKCTP 477



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/404 (24%), Positives = 176/404 (43%), Gaps = 26/404 (6%)

Query: 32  YTTLVAALTRQKRFKSILSLISKV-EKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           YT +   L    +  +I+ L   +  + G +     +N  ++A +++     A + FQ+M
Sbjct: 5   YTVVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
           +  G  P   TY+ +++G    G+ +++ +LL  + ++  VK N  TY++++   C  + 
Sbjct: 65  QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQL-RESGVKLNVITYSVVIDGCCKASR 123

Query: 151 IEEAWNVVYKMVASG-IQPDAVTYNTLARAYAQYGETYRAEQMLFE-MQNNQVRPNERTC 208
           +++A  +   M A G   PD VT+N+L +     GE      +LFE M      PN  + 
Sbjct: 124 VDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCS-GERMSEAFVLFEYMAKAGCEPNVISY 182

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             ++ G CK G +++A R    M E    P+LV + S + G                M  
Sbjct: 183 STLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVT 242

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G K D V FST++      G     +E  + M++       H+         R+G   +
Sbjct: 243 KGSKADAVAFSTVIGILCKKG---HAEEAQNQMIE-------HL--------CRSGMLDE 284

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC---EIGINPNLKTYET 385
           A      M      P+  +F T+I   C + ++   + ++++M    E    PNL+TY  
Sbjct: 285 ACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNI 344

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           ++    +AKQ   A+EL+  M   G+ P   T   + D    +G
Sbjct: 345 MVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLG 388


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/459 (24%), Positives = 202/459 (44%), Gaps = 22/459 (4%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG-MKP 62
           L   G+  +A  +   L E G +  +ITY+ ++    +  R    L +   +   G   P
Sbjct: 83  LCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVP 142

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D + FN+++        + EA  +F+ M  +GC+P   +Y+TL+ G    G+ +E+ +L 
Sbjct: 143 DVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLW 202

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           + M + K+  P+   Y   V   C  N + EA +   KMV  G + DAV ++T+     +
Sbjct: 203 EEMVE-KSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCK 261

Query: 183 YGETYRAEQMLFE-----------------MQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
            G    A+  + E                 M +    P+      ++   CK   + D +
Sbjct: 262 KGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGV 321

Query: 226 RFLYRMK---ELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIM 282
               RMK   E    PNL  +N ++      K  D   + +  M  +G+ PDVVT+S ++
Sbjct: 322 LLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALV 381

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
           D     G + +  ++ ++M K G+ PD    + +     +AG+   A S L +M+  G  
Sbjct: 382 DGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGST 441

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           P++V + T++ G C A ++  A++   KM      P++ +Y  ++     + Q   A  +
Sbjct: 442 PDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAI 501

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
            Q M ++GV P       + D     GL   A  +LK++
Sbjct: 502 FQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTS 540



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/431 (28%), Positives = 196/431 (45%), Gaps = 30/431 (6%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  EA  ++  ++E+   P L+ YT+ V  L +  R         K+   G 
Sbjct: 186 LDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGS 245

Query: 61  KPDSILF-----------------NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYN 103
           K D++ F                 N MI     SG +DEA K F++M      P+   +N
Sbjct: 246 KADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFN 305

Query: 104 TLIKGYGNVGKPEESLKLLQLMSQDKN--VKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
           TLI       +  + + L Q M   K     PN  TYNI+V   C    ++EA  +V +M
Sbjct: 306 TLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEM 365

Query: 162 VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM 221
              G+ PD VTY+ L     + G+  RA  +L EM    V P+  T   I++   K G +
Sbjct: 366 ANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKV 425

Query: 222 EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTF 278
           + A+  L  MK     P+LV +N+L+ G      +  +D+A+T + +       PDV ++
Sbjct: 426 DYALSHLETMKARGSTPDLVTYNTLLDGLC---KAGRIDEAITFLAKMVAAKCTPDVFSY 482

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG-EPQKAESILTSMR 337
           + I+ A   +G       IF +MVK G+ PD  ++  L  G  R G E    E + TS+ 
Sbjct: 483 TIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLC 542

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
           K    P+ VM   V+ G C A K + A  + E+M + G   +  TY +++ G  +  +  
Sbjct: 543 K----PDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVD 598

Query: 398 RAEELLQVMEE 408
           +A +L+    E
Sbjct: 599 KARQLVDDASE 609



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/447 (23%), Positives = 196/447 (43%), Gaps = 55/447 (12%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           ++G++ ++ TY   + AL +    +       ++++ G  PD   ++ ++    ++G +D
Sbjct: 31  QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +A ++  ++++SG K    TY+ +I G     + +++L++ + MS      P+  T+N L
Sbjct: 91  KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSL 150

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           ++  CS   + EA+ +   M  +G +P+ ++Y+TL     + G    A ++  EM     
Sbjct: 151 LKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSC 210

Query: 202 RPNERTCGIIVSGYCK----------------EGNMEDAMRF------------------ 227
            P+       V+G CK                +G+  DA+ F                  
Sbjct: 211 VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQN 270

Query: 228 -----LYRMKELEVH-------------PNLVVFNSLIKGFLDIKD-SDGV--DKALTLM 266
                L R   L+               P+  +FN+LI      K   DGV   + +  M
Sbjct: 271 QMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSM 330

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           +EF   P++ T++ ++D    A  + + QE+ ++M   G+ PD+  +S L  G  + G+ 
Sbjct: 331 KEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKL 390

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +A  +L  M K GV P+     ++++    A K+  A+S  E M   G  P+L TY TL
Sbjct: 391 DRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTL 450

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRP 413
           L G  +A +   A   L  M      P
Sbjct: 451 LDGLCKAGRIDEAITFLAKMVAAKCTP 477



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/404 (23%), Positives = 176/404 (43%), Gaps = 26/404 (6%)

Query: 32  YTTLVAALTRQKRFKSILSLISKV-EKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           YT +   L    +  +I+ L   +  + G +     +N  ++A +++     A + FQ+M
Sbjct: 5   YTVVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
           +  G  P   TY+ +++G    G+ +++ +LL  + ++  VK N  TY++++   C  + 
Sbjct: 65  QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQL-RESGVKLNVITYSVVIDGCCKASR 123

Query: 151 IEEAWNVVYKMVASG-IQPDAVTYNTLARAYAQYGETYRAEQMLFE-MQNNQVRPNERTC 208
           +++A  +   M + G   PD VT+N+L +     GE      +LFE M      PN  + 
Sbjct: 124 VDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCS-GERMSEAFVLFEYMAKAGCEPNVISY 182

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             ++ G CK G +++A R    M E    P+LV + S + G                M  
Sbjct: 183 STLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVT 242

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G K D V FST++      G     +E  + M++       H+         R+G   +
Sbjct: 243 KGSKADAVAFSTVIGILCKKG---HAEEAQNQMIE-------HL--------CRSGMLDE 284

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC---EIGINPNLKTYET 385
           A      M      P+  +F T+I   C + ++   + ++++M    E    PNL+TY  
Sbjct: 285 ACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNI 344

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           ++    +AKQ   A+EL+  M   G+ P   T   + D    +G
Sbjct: 345 MVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLG 388


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 206/449 (45%), Gaps = 18/449 (4%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G +P L+TY  ++ AL +  +    +    ++      PD   ++ ++N   +   VDE
Sbjct: 192 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 251

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+ +  +M+  GC P   T+N LI      G    + KL+  M   K   PN+ TYN L+
Sbjct: 252 AVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFL-KGCVPNEVTYNTLI 310

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
              C K  +++A +++ KMV+S   P+ VTY T+     +         +L  M+    +
Sbjct: 311 HGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQK 370

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
            NE     ++SG  KEG  E+A+R    M E    PN+VV+ + I G    +  D  +  
Sbjct: 371 ANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDI 430

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           L  M   G  P+  T+S++M  +   G   K   ++ +M+   +  ++   S+L  G   
Sbjct: 431 LQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCE 490

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI-YEKMC-EIGINPNL 380
           +G  ++A ++ T M   G+ P+VV ++++I G C+   + + + + YE  C E    P++
Sbjct: 491 SGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDV 550

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA-IGLAREAKRVLK 439
            TY  L           RA +LL  M ++G  P   T  +  ++ R  I   ++ +  L 
Sbjct: 551 VTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFL- 609

Query: 440 SAEEDRQSMPNKKDEIAVESIHRKQNLSA 468
                        DE+ V  + R++ LSA
Sbjct: 610 -------------DELVVRLLKRERKLSA 625



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 123/498 (24%), Positives = 233/498 (46%), Gaps = 10/498 (2%)

Query: 10  PHEAHYIFNCLIEEGH-RPTLITYTTLVAALTRQKRFKSILSLISKV---EKDGMKPDSI 65
           P EA   F+ +  + H + T+ ++ +++  + ++  F         V      G +P+ +
Sbjct: 140 PGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLL 199

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            +N +I A  + G +D A+  F++M    C P   TY+TL+ G     + +E++ LL  M
Sbjct: 200 TYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEM 259

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
            Q +   PN  T+N+L+ A      +  A  +V  M   G  P+ VTYNTL       G+
Sbjct: 260 -QAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 318

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
             +A  +L +M +++  PN+ T G I++G  K+   ED +  L  M+E     N  +++S
Sbjct: 319 LDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSS 378

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           LI G      S+   +    M E G KP+VV +   +D         + ++I  +M+  G
Sbjct: 379 LISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKG 438

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
             P+   +S L KG+ + G+ QKA  +   M    +  NVV  + +++G C + +++ A+
Sbjct: 439 FLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREAL 498

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM--EEKGVRPKKSTIQLVAD 423
           +++  M   G+ P++  Y +++ G  +     +  +L   M  +E   RP   T  ++ +
Sbjct: 499 TVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFN 558

Query: 424 SW-RAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFL-QIPGVVS 481
           +  R   L R A  +L S  ++     +    I +E++  + N       FL ++   + 
Sbjct: 559 ALCRQDNLTR-AIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLL 617

Query: 482 SEHNGSSAAKIRSQIVLR 499
                 SA +I  +++LR
Sbjct: 618 KRERKLSALRIVEEMLLR 635



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/377 (24%), Positives = 173/377 (45%), Gaps = 45/377 (11%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L  + +  EA ++ + +  EG  P  +T+  L+ AL++         L+  +   G 
Sbjct: 240 MNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGC 299

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG------------ 108
            P+ + +N +I+     G +D+A+ + +KM  S C P   TY T+I G            
Sbjct: 300 VPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVH 359

Query: 109 ----------------YGNV-------GKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
                           Y ++       GK E +++L + M++ K  KPN   Y   +   
Sbjct: 360 ILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAE-KGCKPNVVVYGAFIDGL 418

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C     +EA +++ +M++ G  P+A TY++L + + + G++ +A  +  EM +  +R N 
Sbjct: 419 CRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNV 478

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
             C ++++G C+ G + +A+     M    + P++V ++S+IKG  D+     VDK L L
Sbjct: 479 VCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDV---GSVDKGLKL 535

Query: 266 MEEFGV-----KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
             E        +PDVVT++ + +A      + +  ++ + M+  G +PD    +I  +  
Sbjct: 536 FYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 595

Query: 321 V-RAGEPQKAESILTSM 336
             R   PQ     L  +
Sbjct: 596 RERINPPQDGRLFLDEL 612



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 161/358 (44%), Gaps = 3/358 (0%)

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
           ++  +MK  G   T + +  + K  G    P E++     M+ D + K   +++N ++  
Sbjct: 110 QVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNV 169

Query: 145 WCSKNSIEEAWNV---VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
              +     A+     V+   + G QP+ +TYN + +A  + G+  RA     EM     
Sbjct: 170 IIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNC 229

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            P+  T   +++G CKE  +++A+  L  M+     PN V FN LI       D     K
Sbjct: 230 NPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAK 289

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            +  M   G  P+ VT++T++      G + K   + + MV +   P+   +  +  G V
Sbjct: 290 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLV 349

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           +    +    IL SM + G   N  +++++ISG     K + A+ ++++M E G  PN+ 
Sbjct: 350 KQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVV 409

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            Y   + G    ++P  AE++LQ M  KG  P   T   +   +   G +++A  V K
Sbjct: 410 VYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWK 467


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 198/398 (49%), Gaps = 11/398 (2%)

Query: 20  LIEEGHR----PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           L+EE  R    P ++T+ TL++ L R   F+ +  +++++ + G  PD  ++  +I+   
Sbjct: 286 LMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGIC 345

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G+++ A +I  +M   G KP    YNTL+KG  +  + EE+ +LL  M  DK+   +D
Sbjct: 346 KEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMF-DKDCPLDD 404

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            T+NILV  +C    ++    ++ +M+  G  PD +TY T+   + + G    A  +L  
Sbjct: 405 VTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 464

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M     +PN  +  I++ G C      DA   + +M +     N + FN+LI  FL  K 
Sbjct: 465 MTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLIN-FLCKKG 523

Query: 256 SDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
              V++A+ L+++    G  PD++++ST++D    AG   +  E+ + MV  G+ P+  +
Sbjct: 524 L--VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTII 581

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           +S +A    R G   K   +  +++   +  + V++  VIS  C   + +RA+     M 
Sbjct: 582 YSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMV 641

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
             G  PN  TY  L+ G         A+E+L  +  KG
Sbjct: 642 SSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 207/444 (46%), Gaps = 41/444 (9%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   TY  +V AL  + R    L+++ ++ + G  P   +++ ++ A    G    A+++
Sbjct: 157 PNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRV 216

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            + +   GC       N ++    + G  +E+L LL+ +      +P+  +YN +++  C
Sbjct: 217 LEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPS-FGCEPDVVSYNAVLKGLC 275

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                     ++ +MV     P+ VT+NTL     + G   R  ++L +M  +   P+ R
Sbjct: 276 MAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIR 335

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL-------------DI 253
               I+ G CKEG++E A   L RM    + PN+V +N+L+KG               ++
Sbjct: 336 MYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 395

Query: 254 KDSDG-------------------VDKALTLME---EFGVKPDVVTFSTIMDAWSSAGLM 291
            D D                    VD+ + L+E   E G  PDV+T++T+++ +   GL+
Sbjct: 396 FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLI 455

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            +   +   M   G +P+   ++I+ KG   A     AE +++ M + G   N + F T+
Sbjct: 456 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 515

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I+  C    +++A+ + ++M   G +P+L +Y T++ G G+A +   A ELL VM  KG+
Sbjct: 516 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 575

Query: 412 RPKKSTIQLVADSWRAIGLAREAK 435
            P       +A +     L+RE +
Sbjct: 576 SPNTIIYSSIASA-----LSREGR 594



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/438 (23%), Positives = 207/438 (47%), Gaps = 1/438 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N +  +G   EA ++   L   G  P +++Y  ++  L   KR+  +  L+ ++ +   
Sbjct: 236 LNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMAC 295

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + FN +I+    +G  +   ++  +M + GC P    Y T+I G    G  E + +
Sbjct: 296 PPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHE 355

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M     +KPN   YN L++  CS    EE   ++ +M       D VT+N L   +
Sbjct: 356 ILNRMPS-YGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFF 414

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G   R  ++L +M  +   P+  T   +++G+CKEG +++A+  L  M      PN 
Sbjct: 415 CQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNT 474

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +  ++KG    +     +  ++ M + G   + +TF+T+++     GL+ +  E+   
Sbjct: 475 ISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQ 534

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  G  PD+  +S +  G  +AG+  +A  +L  M   G+ PN ++++++ S      +
Sbjct: 535 MLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGR 594

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           + + + +++ + +  I  +   Y  ++    +  +  RA E L  M   G  P +ST  +
Sbjct: 595 INKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTI 654

Query: 421 VADSWRAIGLAREAKRVL 438
           +     + G  +EA+ +L
Sbjct: 655 LIRGLASEGFVKEAQEML 672



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 162/339 (47%), Gaps = 4/339 (1%)

Query: 102 YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKM 161
           YN ++ GY   G+ E + +L   +     V PN  TY  +VRA C++  I +A  V+ +M
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP----VPPNAYTYFPVVRALCARGRIADALAVLDEM 185

Query: 162 VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNM 221
              G  P    Y+ +  A  + G    A ++L ++       +   C ++++  C +G++
Sbjct: 186 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 245

Query: 222 EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTI 281
           ++A+  L  +      P++V +N+++KG    K    V + +  M      P++VTF+T+
Sbjct: 246 DEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 305

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +      GL  +  E+   MV+ G  PDI +++ +  G  + G  + A  IL  M  YG+
Sbjct: 306 ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGL 365

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
            PNVV + T++ G C+A + +    +  +M +     +  T+  L+  + +     R  E
Sbjct: 366 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 425

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
           LL+ M E G  P   T   V + +   GL  EA  +LKS
Sbjct: 426 LLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 464



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/408 (22%), Positives = 190/408 (46%), Gaps = 4/408 (0%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           Y  +VA   R  + +S   L + V    + P++  +  ++ A    G + +A+ +  +M 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
             GC P    Y+ +++     G    ++++L+ +   +    +    N+++ A C + S+
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDL-HARGCALDVGNCNLVLNAICDQGSV 245

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           +EA +++  + + G +PD V+YN + +           ++++ EM      PN  T   +
Sbjct: 246 DEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 305

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           +S  C+ G  E     L +M E    P++ ++ ++I G       +   + L  M  +G+
Sbjct: 306 ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGL 365

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           KP+VV ++T++    SA    + +E+  +M       D   F+IL   + + G   +   
Sbjct: 366 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 425

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +L  M ++G  P+V+ +TTVI+G+C    +  A+ + + M   G  PN  +Y  +L G  
Sbjct: 426 LLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 485

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            A++   AE+L+  M ++G      T   + +     GL  +A  +LK
Sbjct: 486 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLK 533



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 143/320 (44%), Gaps = 18/320 (5%)

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           YN +V  +C    +E A  +     A  + P+A TY  + RA    G    A  +L EM 
Sbjct: 130 YNAMVAGYCRAGQLESARRLA---AAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFL----YRMKELEVHPNLVVFNSLIKGFLDI 253
                P      +I+   C+ G    A+R L     R   L+V    +V N+       I
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNA-------I 239

Query: 254 KDSDGVDKALTLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
            D   VD+AL L+ +   FG +PDVV+++ ++     A   G  QE+ ++MV+    P+I
Sbjct: 240 CDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNI 299

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             F+ L     R G  ++   +L  M ++G  P++ M+ T+I G C    ++ A  I  +
Sbjct: 300 VTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNR 359

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M   G+ PN+  Y TLL G   A++    EELL  M +K       T  ++ D +   GL
Sbjct: 360 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGL 419

Query: 431 AREAKRVLKSAEEDRQSMPN 450
                 +L+   E    MP+
Sbjct: 420 VDRVIELLEQMLE-HGCMPD 438


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/529 (23%), Positives = 234/529 (44%), Gaps = 49/529 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHR---PTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           +  L  K +  EA  IF    EE  R   P + TY  L+  L R+ +  + L +   +E+
Sbjct: 132 LTCLGKKRRVEEALRIF----EEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMER 187

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+ P+ +  N MI+   ++  ++EA  IF+ M D  C P   T+++LI G G  G+ ++
Sbjct: 188 AGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDD 247

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +  L + M    +V P    Y  L+R++      E+   +  +MV +G  PD    NT  
Sbjct: 248 AYSLYEKMLDCGHV-PGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYM 306

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI--------------------------- 210
               + GET +   +  E+  +   P+ R+  I                           
Sbjct: 307 DCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCV 366

Query: 211 --------IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
                   ++ G+CK G +  A + L  MK     P +V + S+I G   I   D +D+A
Sbjct: 367 LDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKI---DRLDEA 423

Query: 263 LTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
             L EE    G+K +VV +S+++D +   G + +   I +++++ G+ P+++ ++ L   
Sbjct: 424 YMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 483

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
            V+A E  +A     SM+     PN + ++ +I+G C   K  +A   +++M ++G+ PN
Sbjct: 484 LVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPN 543

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             TY T++ G  +A     A  L    +  G  P  ++   + +   +   A +A  + +
Sbjct: 544 TITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFE 603

Query: 440 SAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSEHNGSS 488
                  ++  K   + ++++H+ + L  +      +     S+H   S
Sbjct: 604 ETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKETAKSQHASRS 652



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/441 (24%), Positives = 191/441 (43%), Gaps = 12/441 (2%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVA----------ALTRQKRFKSILSLISKVEKD 58
           K  EA  I   + +   RP    YT L+            L +  R    + L  ++E++
Sbjct: 25  KLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQLEQN 84

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
              P +  +N MI     +G  DEA  + ++ K  G  P+   YN ++   G   + EE+
Sbjct: 85  RKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEA 144

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           L++ + M +D    PN  TYNIL+   C +  +  A  +   M  +G+ P+ +T N +  
Sbjct: 145 LRIFEEMKRD--AVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMID 202

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
              +  +   A  +   M +    PN  T   ++ G  K G ++DA     +M +    P
Sbjct: 203 RLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVP 262

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
             +V+ SLI+ F      +   K    M   G  PD+   +T MD    AG   K + +F
Sbjct: 263 GAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALF 322

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
            ++   G  PD   +SIL  G V+AG   +   +  +M++ G   +   +  VI G+C +
Sbjct: 323 REINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKS 382

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            K+ +A  + E+M   G  P + TY +++ G  +  +   A  L +  +  G++      
Sbjct: 383 GKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVY 442

Query: 419 QLVADSWRAIGLAREAKRVLK 439
             + D +  +G   EA  +++
Sbjct: 443 SSLIDGFGKVGRIDEAYLIME 463



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 105/449 (23%), Positives = 195/449 (43%), Gaps = 3/449 (0%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           +L    +  EA  +F  L +    P    Y T++       +F     L+ + +  G  P
Sbjct: 64  VLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 123

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
             I +N ++    +   V+EA++IF++MK     P   TYN LI      GK   +L++ 
Sbjct: 124 SVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIR 182

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             M +   + PN  T NI++   C    +EEA ++   M      P+AVT+++L     +
Sbjct: 183 DDMER-AGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGK 241

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G    A  +  +M +    P       ++  + K G  ED  +    M      P+L +
Sbjct: 242 CGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTL 301

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
            N+ +       +++        +   G  PD  ++S ++     AGL  +  E+F  M 
Sbjct: 302 INTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMK 361

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           + G   D H ++ +  G+ ++G+  KA  +L  M+  G  P VV + +VI G     ++ 
Sbjct: 362 EQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLD 421

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A  ++E+    GI  N+  Y +L+ G+G+  +   A  +++ + +KG+ P   T   + 
Sbjct: 422 EAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL 481

Query: 423 DSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
           D+        EA    +S  +D +  PN+
Sbjct: 482 DALVKAEEINEALICFQSM-KDLKCPPNQ 509



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/434 (23%), Positives = 194/434 (44%), Gaps = 18/434 (4%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN----------A 73
           G  P+      LVA   + ++ +    +I  + K   +P    +  +I            
Sbjct: 5   GFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWV 64

Query: 74  CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP 133
             ++  +DEA+++F++++ +   P    YNT+I GYG+ GK +E+  LL+   + K   P
Sbjct: 65  LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLE-RQKAKGSIP 123

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           +   YN ++     K  +EEA  +  +M    + P+  TYN L     + G+   A ++ 
Sbjct: 124 SVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIR 182

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
            +M+   + PN  T  I++   CK   +E+A      M +    PN V F+SLI G   +
Sbjct: 183 DDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDG---L 239

Query: 254 KDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
                VD A +L E+    G  P  + +++++ ++   G      +I+ +MV  G  PD+
Sbjct: 240 GKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDL 299

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
            + +       +AGE +K  ++   +  +G  P+   ++ +I G   A        ++  
Sbjct: 300 TLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYA 359

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M E G   +   Y  ++ G+ ++ +  +A +LL+ M+ KG  P   T   V D    I  
Sbjct: 360 MKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDR 419

Query: 431 AREAKRVLKSAEED 444
             EA  + + A+ +
Sbjct: 420 LDEAYMLFEEAKSN 433


>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 576

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 220/474 (46%), Gaps = 47/474 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  EA Y    +++ G++P +I  T L+  L   KR +  + ++  +E+ G 
Sbjct: 84  LNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYG- 142

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PDS  +NA+I+    S   D A ++  +MK  G  P   TYN LI      GK + +LK
Sbjct: 143 DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALK 202

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           ++  + +D N  P   TY IL+ A     SI++A  ++ +M++ G+QPD  TYN + R  
Sbjct: 203 VMDQLLED-NCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGM 261

Query: 181 AQYGETYRA--------------------------------EQMLFEMQNNQVRPNERTC 208
            + G   RA                                E+++ +M      PN  T 
Sbjct: 262 CKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTY 321

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
            +++S  C++G   +A+  L  MKE  ++P+   ++ LI  F        VD A+  +++
Sbjct: 322 SVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCK---EGKVDLAIGFVDD 378

Query: 269 F---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
               G  PD+V ++TIM +    G   +   IF  + + G  P+   ++ +      +G+
Sbjct: 379 MISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGD 438

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A +++  M   GV P+ + + ++IS  C    +  A+ +   M      P + +Y  
Sbjct: 439 KIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNI 498

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD-----SWR--AIGLAR 432
           +L G  +A +   A E+L VM + G +P ++T  L+ +      WR  A+ LA+
Sbjct: 499 VLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVELAK 552



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 205/434 (47%), Gaps = 15/434 (3%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +P + HY F    +  H   L         L +  ++   L  + ++ K G KPD IL  
Sbjct: 67  RPQQQHYDFR---DTHHMKAL-------NRLCKTGKYTEALYFLEQMVKRGYKPDVILCT 116

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I     S   ++A+++ + ++  G  P +  YN +I G+    + + + +++  M   
Sbjct: 117 KLIKGLFTSKRTEKAVRVMEILEQYG-DPDSFAYNAVISGFCRSDRFDAANRVILRMKY- 174

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           +   P+  TYNIL+ + C++  ++ A  V+ +++     P  +TY  L  A   +G    
Sbjct: 175 RGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDD 234

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A ++L EM +  ++P+  T  +IV G CK G ++ A  F+     L   P+L ++N L+K
Sbjct: 235 AMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFV---SNLNTTPSLNLYNLLLK 291

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G L+    +  ++ ++ M   G +P++VT+S ++ +    G  G+  ++   M + G+ P
Sbjct: 292 GLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNP 351

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D + +  L   + + G+   A   +  M   G  P++V + T++   C   +   A++I+
Sbjct: 352 DAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIF 411

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           +K+ E+G  PN  +Y T+      +    RA  ++  M   GV P + T   +  S    
Sbjct: 412 KKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRD 471

Query: 429 GLAREAKRVLKSAE 442
           G+  EA  +L   E
Sbjct: 472 GMVDEAIGLLVDME 485


>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
 gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
          Length = 431

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 180/359 (50%), Gaps = 6/359 (1%)

Query: 3   ILVGKGKPHEAHYI---FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG 59
           ++   G+    H +   F  L + G +P   TY  ++ +L +       +  + K+ K G
Sbjct: 20  VIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLDKMIKTG 79

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           ++PD++L+N +++   ++  +DEA K+F  MK  GC     TY  LI+  G   + EE+ 
Sbjct: 80  LEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEAT 139

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            L   M +++   P+   Y  ++  +C    IE A  V+ KM+   + PD  T N+L  A
Sbjct: 140 LLFDEM-EERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITA 198

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
            ++ G T  A ++   M+ + V  N  +   ++    K G +  A +F+  M+   + PN
Sbjct: 199 VSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPN 258

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            + FN+LI      K +    K L  M   G+ PDV T++ +++A++ AG MGK  E+F 
Sbjct: 259 SITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFG 318

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV--ISGWC 356
           DM KAG   ++  +++L    V+AG  Q A  I   M+K G+ P+ +  T +  ++G C
Sbjct: 319 DMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQQLAGKC 377



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 162/353 (45%), Gaps = 1/353 (0%)

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           ++ NA+I A   S  + + M  FQ++   G KP   TY  +I+     G    ++  L  
Sbjct: 15  LVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLDK 74

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M +   ++P+   YN+++      N I+EA  +   M + G   D  TY  L R+  +  
Sbjct: 75  MIK-TGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCK 133

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
               A  +  EM+     P+      ++  YCK G +E AM  L +M +  + P+    N
Sbjct: 134 RDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLN 193

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           SLI        ++   +    M++ GV  + V+F+ ++D    AG +G   +  D+M   
Sbjct: 194 SLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEAR 253

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           GI+P+   F+ L     RA    +A  +L  MR  G+ P+V  +T +I  +  A  M +A
Sbjct: 254 GIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKA 313

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             ++  M + G + N+ TY  L+    +A +   A ++   M++KG+ P   T
Sbjct: 314 FEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAIT 366



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 111/219 (50%), Gaps = 3/219 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++I    G+   A  +   ++++   P   T  +L+ A++R  R +    +  +++K G+
Sbjct: 161 IDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGV 220

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             +++ FNAM++ C ++G V  A +   +M+  G KP + T+NTLI   G      E+ K
Sbjct: 221 AVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYK 280

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +LQ M +   + P+  TY  ++ A+    ++ +A+ +   M  +G   + VTYN L  A 
Sbjct: 281 VLQEM-RSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDAL 339

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGII--VSGYCK 217
            + G    A  + F+M+   + P+  T  ++  ++G CK
Sbjct: 340 VKAGRYQDARDIYFDMKKKGILPDAITATVLQQLAGKCK 378



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 126/303 (41%)

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           QD   + +    N ++ A+   + I +  +   ++   G +P+A TY  + ++  + G  
Sbjct: 6   QDTPCRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNV 65

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A   L +M    + P+     +++ G  K   +++A +    MK +    +   +  L
Sbjct: 66  VLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAIL 125

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I+     K  +        MEE G  P    ++ ++D +  AG +     +   M+   +
Sbjct: 126 IRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNL 185

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PD +  + L     R G  + A  I   M+K GV  N V F  ++     A K+  A  
Sbjct: 186 APDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQ 245

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
             ++M   GI PN  T+ TL+   G AK    A ++LQ M   G+ P   T   + +++ 
Sbjct: 246 FMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFA 305

Query: 427 AIG 429
             G
Sbjct: 306 KAG 308



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 128/287 (44%), Gaps = 17/287 (5%)

Query: 164 SGIQPDAVTYNTLAR--AYAQYGETYRAEQMLFEMQ---NNQVRPNERTCGIIVSGYCKE 218
           + IQ     Y+ L      A YG + R  +++ E Q    +  +PN  T   ++    K 
Sbjct: 3   AAIQDTPCRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKA 62

Query: 219 GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTF 278
           GN+  AM FL +M +  + P+ +++N ++ G       D   K    M+  G   D  T+
Sbjct: 63  GNVVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTY 122

Query: 279 STIMDAWSSAGLMGKCQE------IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           + ++ +      +G+C+       +FD+M + G  P    ++ +   Y +AG  + A  +
Sbjct: 123 AILIRS------LGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVV 176

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           L  M    + P+     ++I+      + + A  I+E+M + G+  N  ++  +L   G+
Sbjct: 177 LKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGK 236

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           A +   A + +  ME +G++P   T   + +       A EA +VL+
Sbjct: 237 AGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQ 283



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 78/177 (44%)

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           L  +++   +  V+  + ++ A+  +  + K  + F ++ K G +P+ + +  + +  V+
Sbjct: 2   LAAIQDTPCRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVK 61

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           AG    A   L  M K G+ P+ +++  V+ G   A  +  A  ++  M  +G   +  T
Sbjct: 62  AGNVVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYT 121

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           Y  L+   G  K+   A  L   MEE+G  P       V D +   G    A  VLK
Sbjct: 122 YAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLK 178



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 47/125 (37%)

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
            Y R+    K       + K+G  PN   +  VI     A  +  AM   +KM + G+ P
Sbjct: 23  AYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLDKMIKTGLEP 82

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           +   Y  +L G G+A     A +L   M+  G      T  ++  S        EA  + 
Sbjct: 83  DTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLF 142

Query: 439 KSAEE 443
              EE
Sbjct: 143 DEMEE 147


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 200/422 (47%), Gaps = 1/422 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E G  P ++TY TL+    + +   + L +   +  +G+K +  + ++++N   ++G ++
Sbjct: 442 ERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIE 501

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           EAM +F+    SG       Y TLI G    G    + K  Q +  D+N+ P+   YN+ 
Sbjct: 502 EAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQEL-MDRNMLPDAVVYNVF 560

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +   C     +EA + + +M   G++PD  TYNT+  ++ + GET +A ++L EM+ + +
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           +PN  T   +V+G    G +E A   L  M      P+ +    +++     +  D +  
Sbjct: 621 KPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILD 680

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
               M   G+  D+  ++T++      G+  K   + ++M+ +GI PD   F+ L  G+ 
Sbjct: 681 IHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHC 740

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           ++     A +    M    + PN+  F T++ G  +  ++  A ++  +M + G+ PN  
Sbjct: 741 KSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNL 800

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY+ L  G+G+      A  L   M  KG  PK ST   +   +   G+  +AK + K  
Sbjct: 801 TYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDM 860

Query: 442 EE 443
           ++
Sbjct: 861 QK 862



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 204/460 (44%), Gaps = 42/460 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L  +GK  E        + +   P  +TYT L+ AL +         ++ ++E+  +
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI 410

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + F+++IN   + G +D+A +  + MK+ G  P   TY TLI G+      + +L+
Sbjct: 411 SPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALE 470

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ------------- 167
           +   M  +  VK N    + LV        IEEA  +      SG+              
Sbjct: 471 VYHDMLCE-GVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGL 529

Query: 168 ----------------------PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                                 PDAV YN         G+   A+  L EM+N  ++P++
Sbjct: 530 FKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQ 589

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   ++  +C++G    A++ L+ MK   + PNL+ +N+L+ G      +  V+KA  L
Sbjct: 590 STYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLF---GTGAVEKAKYL 646

Query: 266 MEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           + E    G  P  +T   ++ A S +  +    +I + M+ AG+  DI V++ L +    
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G  +KA  +L  M   G+ P+ + F  +I G C +  +  A + Y +M    I+PN+ T
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
           + TLL G     +   A  +L  ME+ G+ P   T  ++A
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILA 806



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 181/403 (44%), Gaps = 36/403 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  EA  +F      G     + YTTL+  L +     +      ++    M
Sbjct: 491 VNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD++++N  IN     G   EA     +M++ G KP  STYNT+I  +   G+  ++LK
Sbjct: 551 LPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT-------- 172
           LL  M    ++KPN  TYN LV       ++E+A  ++ +MV++G  P ++T        
Sbjct: 611 LLHEMKM-SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQAC 669

Query: 173 ---------------------------YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                                      YNTL +    +G T +A  +L EM  + + P+ 
Sbjct: 670 SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDT 729

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   ++ G+CK  ++++A     +M    + PN+  FN+L+ G   +         L  
Sbjct: 730 ITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE 789

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           ME+ G++P+ +T+  +           +   ++ +MV  G  P +  ++ L   + +AG 
Sbjct: 790 MEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGM 849

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
             +A+ +   M+K GVHP    +  ++SGW +  + Q++ + Y
Sbjct: 850 MTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKSQNTY 892



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 193/445 (43%), Gaps = 36/445 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+   A  + + + E G  P + TYT  +    R K  +    L   + ++G+  D +  
Sbjct: 218 GQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTL 277

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +A++      G   EA  +F++M   G  P   TY TLI      G+ +E L LL  M  
Sbjct: 278 SALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVS 337

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + V  +  TY  L+     +   +E  + +   ++  + P+ VTY  L  A  +     
Sbjct: 338 -RGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD 396

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            AEQ+L EM+   + PN  T   +++G+ K G ++ A  +   MKE  ++PN+V + +LI
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 248 KGFLDIKDSDG--------------------------------VDKALTLMEEF---GVK 272
            GF   +  D                                 +++A+ L ++    G+ 
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            D V ++T++D    AG M    +   +++   + PD  V+++        G+ ++A+S 
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSF 576

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           LT MR  G+ P+   + T+I   C   +  +A+ +  +M    I PNL TY TL+ G   
Sbjct: 577 LTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFG 636

Query: 393 AKQPWRAEELLQVMEEKGVRPKKST 417
                +A+ LL  M   G  P   T
Sbjct: 637 TGAVEKAKYLLNEMVSAGFSPSSLT 661



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 196/445 (44%), Gaps = 13/445 (2%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           RPT + Y  L+AAL+      ++L+   ++ K G+  D +  N ++     +G VD A  
Sbjct: 100 RPTTVAYNILLAALSDHAHAPAVLA---EMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT-YNILVRA 144
           +  +            +NTLI GY  VG    +L +   M+      P D   YN LV  
Sbjct: 157 LADRGGGIHALDVIG-WNTLIAGYCRVGDTPAALSVADRMTAQG--LPMDVVGYNTLVAG 213

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +C    ++ A  V+  M  +G+ P+  TY      Y +      A  +   M  N V  +
Sbjct: 214 FCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLD 273

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T   +V+G C++G   +A      M ++   PN V + +LI           +   L 
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLG 333

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM---VKAGIEPDIHVFSILAKGYV 321
            M   GV  D+VT++ +MD W   G  GK  E+ D +   +   + P+   +++L     
Sbjct: 334 EMVSRGVVMDLVTYTALMD-W--LGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALC 390

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           +A    +AE +L  M +  + PNVV F++VI+G+     + +A      M E GINPN+ 
Sbjct: 391 KAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVV 450

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY TL+ G+ + +    A E+   M  +GV+  K  +  + +  R  G   EA  + K A
Sbjct: 451 TYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDA 510

Query: 442 EEDRQSMPNKKDEIAVESIHRKQNL 466
                S+ +      ++ + +  ++
Sbjct: 511 SGSGLSLDHVNYTTLIDGLFKAGDM 535



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/485 (22%), Positives = 201/485 (41%), Gaps = 73/485 (15%)

Query: 25  HRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAM 84
           H   +I + TL+A   R     + LS+  ++   G+  D + +N ++     +G VD A 
Sbjct: 165 HALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAAR 224

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
            +   MK++G  P  +TY   I  Y      EE+  L + M ++  V  +  T + LV  
Sbjct: 225 GVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRN-GVLLDVVTLSALVAG 283

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE------------------- 185
            C      EA+ +  +M   G  P+ VTY TL  + A+ G                    
Sbjct: 284 LCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMD 343

Query: 186 --TYRA---------------EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
             TY A               + + F + +N + PN  T  +++   CK  N+++A + L
Sbjct: 344 LVTYTALMDWLGKQGKTDEVKDTLRFALSDN-LSPNGVTYTVLIDALCKAHNVDEAEQVL 402

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
             M+E  + PN+V F+S+I GF+     D   +   +M+E G+ P+VVT+ T++D +   
Sbjct: 403 LEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
                  E++ DM+  G++ +  +   L  G  + G+ ++A ++       G+  + V +
Sbjct: 463 QGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522

Query: 349 TTVISG-----------------------------------WCNAVKMQRAMSIYEKMCE 373
           TT+I G                                    C   K + A S   +M  
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRN 582

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
           +G+ P+  TY T++  +    +  +A +LL  M+   ++P   T   +       G   +
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642

Query: 434 AKRVL 438
           AK +L
Sbjct: 643 AKYLL 647



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 145/332 (43%), Gaps = 25/332 (7%)

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           ++ +P    YNIL+ A         A  V+ +M   G+  D VT NTL     + G+   
Sbjct: 97  RSSRPTTVAYNILLAALSDH---AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDA 153

Query: 189 AEQMLFEMQNNQVRPNERTCGI----------IVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           A  +            +R  GI          +++GYC+ G+   A+    RM    +  
Sbjct: 154 AAAL-----------ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPM 202

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           ++V +N+L+ GF      D     L +M+E GV P+V T++  +  +     + +  +++
Sbjct: 203 DVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLY 262

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           + MV+ G+  D+   S L  G  R G   +A ++   M K G  PN V + T+I     A
Sbjct: 263 EGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKA 322

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            + +  +S+  +M   G+  +L TY  L+   G+  +    ++ L+      + P   T 
Sbjct: 323 GRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTY 382

Query: 419 QLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            ++ D+        EA++VL   EE   S PN
Sbjct: 383 TVLIDALCKAHNVDEAEQVLLEMEEKSIS-PN 413



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 139/310 (44%), Gaps = 4/310 (1%)

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR 226
           +P  V YN L  A + +     A  +L EM    V  +  T   +++G C+ G ++ A  
Sbjct: 100 RPTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
              R   +    +++ +N+LI G+  + D+         M   G+  DVV ++T++  + 
Sbjct: 157 LADRGGGIHA-LDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFC 215

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
            AG +   + + D M +AG++P++  ++     Y R    ++A  +   M + GV  +VV
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVV 275

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
             + +++G C   +   A +++ +M ++G  PN  TY TL+    +A +      LL  M
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNL 466
             +GV     T   + D     G   E K  L+ A  D  S       + ++++ +  N+
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNV 395

Query: 467 SASNSTFLQI 476
             +    L++
Sbjct: 396 DEAEQVLLEM 405



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/194 (20%), Positives = 80/194 (41%), Gaps = 1/194 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L   G   +A  +   ++  G  P  IT+  L+    +     +  +  +++    +
Sbjct: 701 LQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   FN ++      G + EA  +  +M+ SG +P   TY+ L  G+G      E+++
Sbjct: 761 SPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMR 820

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M   K   P   TYN L+  +     + +A  +   M   G+ P + TY+ L   +
Sbjct: 821 LYCEMV-GKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879

Query: 181 AQYGETYRAEQMLF 194
                  +++   F
Sbjct: 880 YDLAREQKSQNTYF 893


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 187/382 (48%), Gaps = 2/382 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           EG  PTL+TY  ++  L + ++ ++     +++   G+ PD I +N+M+N   ++GN+ E
Sbjct: 343 EGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKE 402

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+ +   ++ +G  PT  TYNTLI GY  +G  EE+ +L + M + +   P+  TY IL+
Sbjct: 403 ALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVE-QGCFPDVCTYTILM 461

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
                  ++  A     +M++ G+QPD   YNT   A    G+T++A Q+   M    + 
Sbjct: 462 NGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIY 521

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+  T  +I+ G CK GN++DA     +M    + P+ + +  LI    +        K 
Sbjct: 522 PDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKL 581

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           L  M   G++P VVT++ ++      G +      F  M+  GIEP+   +++L     R
Sbjct: 582 LNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCR 641

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G    A      M + G+ PN   +T +I G C       A+ +Y +M + GI P+  T
Sbjct: 642 TGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCT 701

Query: 383 YETLLWGYGEAKQPWRAEELLQ 404
           +  L  G+ +    + A E L+
Sbjct: 702 HNALFKGFDKGHM-YHAIEYLE 722



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 193/434 (44%), Gaps = 39/434 (8%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKD--GMKPDSILFNAMINACSESGNVDEAM 84
           PT++TY TL+ +  ++ R      L+ ++E    G   + + +N +I+  +  G+++ A 
Sbjct: 241 PTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAA 300

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
           K+   M+ S  K ++ TYN LI      G  ++ ++ LQ+  +++ + P   TYN ++  
Sbjct: 301 KLVDSMRLSK-KASSFTYNPLITALLERGFVQK-VEALQMEMENEGIMPTLVTYNAIIHG 358

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
                 +E A     +M A G+ PD +TYN++   Y + G    A  +L +++   + P 
Sbjct: 359 LLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPT 418

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG------------FLD 252
             T   ++ GYC+ G +E+A R    M E    P++  +  L+ G            F D
Sbjct: 419 VLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFD 478

Query: 253 IKDSDGVD--------------------KALTLMEEF---GVKPDVVTFSTIMDAWSSAG 289
              S G+                     KA  L E     G+ PD VT++ I+D     G
Sbjct: 479 EMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTG 538

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
            +   +++   MV  G++PD   ++ L   +   G   +A  +L  M   G+ P+VV +T
Sbjct: 539 NLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYT 598

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
            +I   C    +  A   + KM ++GI PN  TY  L+       +   A      M E+
Sbjct: 599 ILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLER 658

Query: 410 GVRPKKSTIQLVAD 423
           G+ P K T  L+ D
Sbjct: 659 GLAPNKYTYTLLID 672



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/410 (24%), Positives = 193/410 (47%), Gaps = 10/410 (2%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           F  +   G  P +     ++  L    R+  + ++  ++ +  ++P  + +N ++++  +
Sbjct: 196 FRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLK 255

Query: 77  SGNVDEAMKIFQKM--KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
            G  DEA  + ++M  +  GC     TYN +I      G  E + KL+  M   K  K +
Sbjct: 256 EGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSK--KAS 313

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
             TYN L+ A   +  +++   +  +M   GI P  VTYN +     +  +   A+    
Sbjct: 314 SFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFA 373

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           EM+   + P+  T   +++GYCK GN+++A+  L  ++   + P ++ +N+LI G+  + 
Sbjct: 374 EMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRL- 432

Query: 255 DSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
              G+++A  L EE    G  PDV T++ +M+       +   +E FD+M+  G++PD  
Sbjct: 433 --GGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCF 490

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++      +  G+  KA  +   M   G++P+ V +  +I G C    ++ A  +  KM
Sbjct: 491 AYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKM 550

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
              G+ P+  TY  L+  + E      A +LL  M   G++P   T  ++
Sbjct: 551 VSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTIL 600



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 193/429 (44%), Gaps = 8/429 (1%)

Query: 49  LSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
           L+    V   G+ PD    N ++    ++   D+   ++++M     +PT  TYNTL+  
Sbjct: 193 LAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDS 252

Query: 109 YGNVGKPEESLKLLQLM-SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ 167
           +   G+ +E+  LL+ M +Q      ND TYN+++     +  +E A  +V  M  S  +
Sbjct: 253 FLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSK-K 311

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
             + TYN L  A  + G   + E +  EM+N  + P   T   I+ G  K   +E A   
Sbjct: 312 ASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLK 371

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDA 284
              M+ + + P+L+ +NS++ G+     +  + +AL L+ +    G+ P V+T++T++D 
Sbjct: 372 FAEMRAMGLLPDLITYNSMLNGYCK---AGNLKEALWLLGDLRRAGLAPTVLTYNTLIDG 428

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           +   G + + + + ++MV+ G  PD+  ++IL  G  +      A      M   G+ P+
Sbjct: 429 YCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPD 488

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
              + T I          +A  + E M   GI P+  TY  ++ G  +      A++L  
Sbjct: 489 CFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKM 548

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQ 464
            M   G++P   T   +  +    GL  EA+++L     D          I + +  R+ 
Sbjct: 549 KMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRG 608

Query: 465 NLSASNSTF 473
           NL ++   F
Sbjct: 609 NLYSAYGWF 617



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 117/238 (49%), Gaps = 1/238 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A   F+ ++ +G +P    Y T + A            L   +   G+ PD++ +N +I+
Sbjct: 473 AREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIID 532

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              ++GN+ +A  +  KM   G +P   TY  LI  +   G   E+ KLL  M  D  ++
Sbjct: 533 GLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSD-GLQ 591

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+  TY IL+   C + ++  A+    KM+  GI+P+ +TYN L  A  + G T  A   
Sbjct: 592 PSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHH 651

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
             EM    + PN+ T  +++ G C+EGN  DA+R  + M +  + P+    N+L KGF
Sbjct: 652 FHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 709



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 105/221 (47%), Gaps = 2/221 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G  H+A  +   ++ +G  P  +TY  ++  L +    K    L  K+  DG++PD I +
Sbjct: 503 GDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITY 562

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I+A  E G + EA K+   M   G +P+  TY  LI      G    +    + M  
Sbjct: 563 TCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKM-L 621

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D  ++PN+ TYN+L+ A C       A++  ++M+  G+ P+  TY  L     + G   
Sbjct: 622 DVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWA 681

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
            A ++ FEM  N + P+  T   +  G+ K G+M  A+ +L
Sbjct: 682 DAIRLYFEMHQNGIPPDYCTHNALFKGFDK-GHMYHAIEYL 721



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 51/103 (49%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  + A+  F  +++ G  P  ITY  L+ AL R  R         ++ + G+ P+   
Sbjct: 607 RGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYT 666

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY 109
           +  +I+     GN  +A++++ +M  +G  P   T+N L KG+
Sbjct: 667 YTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 709


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 210/438 (47%), Gaps = 5/438 (1%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK--DGMKPDSILFNAMINA 73
           ++  +++ G  P+++TY TL+ +  R+ R      L+ ++E    G  P  + +N +IN 
Sbjct: 218 VYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVING 277

Query: 74  CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP 133
            +  G +++A ++  +M+ S  K +  T+N LI GY   G  E++   LQL  +++ + P
Sbjct: 278 LARKGELEKAAQLVDRMRMSK-KASAFTFNPLITGYFARGSVEKA-GALQLEMENEGIVP 335

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
              TYN ++       ++E A     +M A G+ PD +TYN+L   Y + G    A  + 
Sbjct: 336 TVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLF 395

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
            +++   + P+  T  I++ GYC+ G++E+A RF   M E    P++  +  L+ G   +
Sbjct: 396 GDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKV 455

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
           ++   V +    M   G++PD   ++T + A    G   +  ++ + M+  GI  D   +
Sbjct: 456 RNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTY 515

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           +I   G  ++G  + A  +   M   G+ P+ + +T +I   C   +++ A  I++ M  
Sbjct: 516 NIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLV 575

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
            G+ P+  TY   +  Y      + A    Q M E+GVRP + T  ++  +   +G    
Sbjct: 576 SGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNL 635

Query: 434 AKRVLKSAEEDRQSMPNK 451
           A +      E R   PNK
Sbjct: 636 AYQHFHEMLE-RGLSPNK 652



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 181/385 (47%), Gaps = 5/385 (1%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           EG  PT++TY T++  + R    ++      ++   G+ PD I +N++IN   ++GN+ E
Sbjct: 331 EGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKE 390

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+ +F  +K +G  P+  TYN L+ GY  +G  EE+ +  Q M + +  +P+  TY IL+
Sbjct: 391 ALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVE-QGCQPDVSTYTILM 449

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
                  ++        +M++ G+QPD   YNT   A    G T  A Q+   M +  + 
Sbjct: 450 NGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGIS 509

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
            +  T  I + G CK GN++DA     +M    + P+ + +  LI    +          
Sbjct: 510 SDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDI 569

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              M   G+ P  VT++  + A+   G +      F  M++ G+ P+   +++L     R
Sbjct: 570 FDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCR 629

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G    A      M + G+ PN   +T +I G C     + A+ +Y +M + GI+P+  T
Sbjct: 630 MGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCT 689

Query: 383 YETLLWGYGEAKQPWRAEELLQVME 407
           +  L  G+ E +    ++  +Q ME
Sbjct: 690 HNALFKGFDEGQ----SKHAIQYME 710



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 116/235 (49%), Gaps = 1/235 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
            F+ ++ +G +P    Y T ++A            L   +   G+  D++ +N  ++   
Sbjct: 464 FFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLC 523

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           +SGN+ +A  ++ KM   G +P   TY  LI  +   G+  E+  +   M     + P+ 
Sbjct: 524 KSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVS-GLPPSA 582

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY + + A+C + ++  A+    KM+  G++P+ VTYN L  A  + G T  A Q   E
Sbjct: 583 VTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHE 642

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           M    + PN+ T  +++ G CKEGN E+A+R    M +  +HP+    N+L KGF
Sbjct: 643 MLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 149/288 (51%), Gaps = 9/288 (3%)

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           V P  +  N+++RA   +   ++  +V  +M+  GI+P  VTYNTL  ++ + G   +A 
Sbjct: 192 VPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAA 251

Query: 191 QMLFEMQNNQ--VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           ++L EM+       P++ T  ++++G  ++G +E A + + RM+ +    +   FN LI 
Sbjct: 252 KLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMR-MSKKASAFTFNPLIT 310

Query: 249 GFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           G+        V+KA  L   ME  G+ P VVT++TI+     +G +   +  F +M   G
Sbjct: 311 GYF---ARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMG 367

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + PD+  ++ L  GY +AG  ++A  +   +++ G+ P+V+ +  ++ G+C    ++ A 
Sbjct: 368 LLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEAR 427

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
              ++M E G  P++ TY  L+ G  + +      E    M  KG++P
Sbjct: 428 RFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQP 475



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 63/117 (53%), Gaps = 1/117 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G  + A+  F  ++EEG RP  +TY  L+ AL R  R         ++ + G+ P+   
Sbjct: 595 RGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYT 654

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +  +I+   + GN +EA++++ +M   G  P   T+N L KG+ + G+ + +++ ++
Sbjct: 655 YTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF-DEGQSKHAIQYME 710


>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 727

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 206/419 (49%), Gaps = 5/419 (1%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE---KDGMKPDSILFNAMINACSESG 78
           E+G   TL  Y  L+    R       L++  K++     G+ P ++ +  +IN  ++ G
Sbjct: 256 EQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTYGCLINLYTKLG 315

Query: 79  NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
            + +A++  ++MK  G     +TY+ L+ GY  +G    +  + + MS +  ++P+  TY
Sbjct: 316 KMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMS-EAGIEPDWVTY 374

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           NIL++A+C    +  A  ++ +M   G  P   TY T+   + + G+   A + + EM+ 
Sbjct: 375 NILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKL 434

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
              RPN  T  +I+    + G ++ A   +  M+   V PN   + +L++GF  I +   
Sbjct: 435 AGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGL 494

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
             K L  + E   KP ++++++++ A   AG M     + ++M  AG+  + ++F+ L  
Sbjct: 495 AFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLD 554

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           G+ + G+  +A  I+  MR+ G  P++  +T+ ++  C A  MQ+A    E+M +  + P
Sbjct: 555 GWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATETIEEMKQQDLQP 614

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA-IGLAREAKR 436
           NL+TY  L+ G+     P +A      M+  G+ P K     +  S  +   +ARE  R
Sbjct: 615 NLQTYTILIHGWTSVSHPEKALICYDEMKAAGLIPDKPLYYCIVTSLLSKAAIARETVR 673



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/483 (23%), Positives = 214/483 (44%), Gaps = 42/483 (8%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G    A   F  +   G   ++  Y  L+ A    +  +  +S + ++E +G+ P++  
Sbjct: 136 RGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEMEIEGIFPNAAT 195

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F+A+I+    SGNV+ A K FQ+          + Y+++I  Y   G  E +  L+  M 
Sbjct: 196 FSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNMERAEALVADM- 254

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVA---SGIQPDAVTYNTLARAYAQY 183
           +++ ++     YNIL+  +   +   +  NV +K+ A   +G+ P AVTY  L   Y + 
Sbjct: 255 EEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTYGCLINLYTKL 314

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+  +A +   EM+   +  N  T  ++V GY + G+  +A      M E  + P+ V +
Sbjct: 315 GKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTY 374

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N L+K F   +      + L  M+  G  P + T+ TI+D +   G +    +   +M  
Sbjct: 375 NILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKL 434

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW-------- 355
           AG  P+   ++++    V+ G+  +A S++  M   GV PN   +TT++ G+        
Sbjct: 435 AGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGL 494

Query: 356 ---------------------------CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
                                      C A +MQ A+++ E+M   G+  N   + TLL 
Sbjct: 495 AFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLD 554

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPK-KSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS 447
           G+ +    W A  ++Q M ++G  P   S    V    +A  + +  + + +  ++D Q 
Sbjct: 555 GWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATETIEEMKQQDLQ- 613

Query: 448 MPN 450
            PN
Sbjct: 614 -PN 615



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 101/450 (22%), Positives = 198/450 (44%), Gaps = 34/450 (7%)

Query: 9   KPHE---AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
           +PHE   A   F  LIEE                 + K  + +++   +++K  ++ D  
Sbjct: 86  QPHEKEKASNTFKKLIEE-----------------QPKEVRKVVNAFKRIDK-AVERDYA 127

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
           L   +I+   + G+   A   F+KM+ +G   +   YN LI+ Y      + ++  ++ M
Sbjct: 128 L---LIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEM 184

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
            + + + PN  T++ ++  + S  ++E A     + V+     +   Y+++  AY + G 
Sbjct: 185 -EIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGN 243

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMK---ELEVHPNLVV 242
             RAE ++ +M+   +        I++ GY +       +   +++K   +  + P  V 
Sbjct: 244 MERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVT 303

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +  LI  +  +     + KAL   +E    G+  +  T+S ++D +   G       +F+
Sbjct: 304 YGCLINLYTKLGK---MMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFE 360

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           DM +AGIEPD   ++IL K + ++ +  +A  +L  M+  G  P +  + T+I G+    
Sbjct: 361 DMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTG 420

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
            ++ A     +M   G  PN  TY  ++    +  Q  RA  ++  ME  GV+P   +  
Sbjct: 421 DVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYT 480

Query: 420 LVADSWRAIGLAREAKRVLKSAEEDRQSMP 449
            +   + +IG    A + LK   E  Q  P
Sbjct: 481 TLMQGFASIGEIGLAFKCLKRVNEITQKPP 510



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 1/205 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ LV  G+   A  + + +   G +P   +YTTL+               + +V +   
Sbjct: 448 MHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQ 507

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP  I + +++ AC ++G +  A+ + ++M  +G       +NTL+ G+   G   E+  
Sbjct: 508 KPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYG 567

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           ++Q M Q+    P+  +Y   V A C    +++A   + +M    +QP+  TY  L   +
Sbjct: 568 IMQKMRQE-GFTPDIHSYTSFVNACCKAGDMQKATETIEEMKQQDLQPNLQTYTILIHGW 626

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNE 205
                  +A     EM+   + P++
Sbjct: 627 TSVSHPEKALICYDEMKAAGLIPDK 651



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 77/198 (38%), Gaps = 46/198 (23%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   EA+ I   + +EG  P + +YT+ V                              
Sbjct: 559 RGDMWEAYGIMQKMRQEGFTPDIHSYTSFV------------------------------ 588

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
                NAC ++G++ +A +  ++MK    +P   TY  LI G+ +V  PE++L     M 
Sbjct: 589 -----NACCKAGDMQKATETIEEMKQQDLQPNLQTYTILIHGWTSVSHPEKALICYDEM- 642

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEE------AWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   + P+   Y  +V +  SK +I           V  +MV  G+  D  T     R+ 
Sbjct: 643 KAAGLIPDKPLYYCIVTSLLSKAAIARETVRNGVLQVTSEMVDQGMCIDLATAKQWQRSL 702

Query: 181 AQY----GETYRAEQMLF 194
                  GE  RA + +F
Sbjct: 703 MNVERRPGELTRAVERIF 720


>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
 gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
           Group]
 gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
          Length = 618

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 192/412 (46%), Gaps = 7/412 (1%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F+ ++  G  P+++TY TL+ A   Q        +  ++    + P+ + +  MI A  
Sbjct: 160 LFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALC 219

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           E   + +A  +F +MK++G +P   TYN L+  +      + +L     + +   V PND
Sbjct: 220 EEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLV-PND 278

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
             +  L+   C  N I EA N+   M    + P    YN+L     + G    A     E
Sbjct: 279 VIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQE 338

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           +    +RP+E TC I+V G C  G M+ A RFL  M++  +  N   +N LI  +    +
Sbjct: 339 IIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGN 398

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D      T M E GV+P+VVT+S+++D  S  G M     I+ +MV  G+EP++  ++ 
Sbjct: 399 LDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTA 458

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI---YEKMC 372
           L  G+ + G+   A  +   M + G++ N +  + ++ G C   ++Q A+     Y    
Sbjct: 459 LIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQK 518

Query: 373 EIGINPNLK---TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           +   NP++    TY TL++G     Q   A      M + G+ P + T  LV
Sbjct: 519 KSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLV 570



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 191/405 (47%), Gaps = 15/405 (3%)

Query: 34  TLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS 93
            LV AL++       LS+  ++ +    P     NA+++   ++  +    ++F +M   
Sbjct: 111 VLVIALSQMALPDEALSVFGRLRELPALPAC---NAILDGLVKAHMLARVWELFDEMLGR 167

Query: 94  GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
           G  P+  TYNTLI    + G   ++ ++   M   + + PN  TY  ++ A C ++ I +
Sbjct: 168 GMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVA-RRIDPNVVTYTTMICALCEEDCIGD 226

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
           A  +  +M  +G++P+  TYN L  ++ +      A    +++    + PN+     ++ 
Sbjct: 227 AEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLID 286

Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---G 270
           G C+   + +A      M   EV P + V+NSLI G      S    +AL   +E    G
Sbjct: 287 GLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFR---SGYAQEALAFFQEIIRKG 343

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           ++PD  T S ++      G M       + M ++GI  +   +++L   Y ++G   +A 
Sbjct: 344 LRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEAL 403

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
              T M + GV PNVV ++++I G     +M+ AM+IY +M   G+ PN+ TY  L+ G+
Sbjct: 404 VTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGH 463

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
            +      A  L + MEEKG+     T+ ++ D     GL RE +
Sbjct: 464 AKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVD-----GLCRENR 503



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 168/382 (43%), Gaps = 23/382 (6%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F  + E G RP L TY  L+++  ++   K  L     + K G+ P+ ++F  +I
Sbjct: 226 DAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLI 285

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   ++  + EA  IF  M      PT   YN+LI G    G  +E+L   Q + + K +
Sbjct: 286 DGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIR-KGL 344

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +P++ T +I+VR  C    ++ A   +  M  SGI  +A  YN L   Y + G    A  
Sbjct: 345 RPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALV 404

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
               M    V PN  T   ++ G+ K G ME AM     M    V PN+V + +LI G  
Sbjct: 405 TCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHA 464

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE-IFDDMVKAGIE--- 307
              D D        MEE G+  + +T S ++D        G C+E    D V+  +E   
Sbjct: 465 KNGDMDAAFWLQKEMEEKGIYSNAITVSVLVD--------GLCRENRVQDAVRFIMEYSG 516

Query: 308 -------PDIH---VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
                  P I     +  L  G    G+  +A    + MR  G+ P+   +T VI G C 
Sbjct: 517 QKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCM 576

Query: 358 AVKMQRAMSIYEKMCEIGINPN 379
              +  AM +Y  M ++G+ P 
Sbjct: 577 LGYVLNAMMLYADMVKVGVKPT 598



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 181/405 (44%), Gaps = 8/405 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P ++TYTT++ AL  +        L  ++++ GM+P+   +NA++++  +  N+  A+  
Sbjct: 206 PNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVF 265

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           +  +   G  P    + TLI G     +  E+  +   M +   V P    YN L+    
Sbjct: 266 YYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPR-YEVAPTVPVYNSLIHGAF 324

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                +EA     +++  G++PD  T + + R     G+   A + L  MQ + +  N  
Sbjct: 325 RSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAA 384

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
              +++  YCK GN+++A+    RM E+ V PN+V ++SLI G     + +      T M
Sbjct: 385 AYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEM 444

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              GV+P+VVT++ ++   +  G M     +  +M + GI  +    S+L  G  R    
Sbjct: 445 VAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRV 504

Query: 327 QKAESIL---TSMRKYGVHP---NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
           Q A   +   +  +K   +P   N V + T+I G     +   A   +  M + G+ P+ 
Sbjct: 505 QDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDR 564

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            TY  ++ G         A  L   M + GV+P K  + +  D W
Sbjct: 565 FTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPTKCAM-VCPDIW 608



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 135/307 (43%), Gaps = 42/307 (13%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA   F  +I +G RP   T + +V  L    + +     +  +++ G+  ++  +
Sbjct: 327 GYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAY 386

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I+   +SGN+DEA+    +M + G +P   TY++LI G+   G+ E ++ +   M  
Sbjct: 387 NVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVA 446

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K V+PN  TY  L+        ++ A+ +  +M   GI  +A+T +             
Sbjct: 447 -KGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVS------------- 492

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR---MKELEVHP---NLV 241
                                 ++V G C+E  ++DA+RF+      K+ E +P   N V
Sbjct: 493 ----------------------VLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSV 530

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            + +LI G       +      + M + G+ PD  T++ ++      G +     ++ DM
Sbjct: 531 TYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADM 590

Query: 302 VKAGIEP 308
           VK G++P
Sbjct: 591 VKVGVKP 597



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 119/267 (44%), Gaps = 6/267 (2%)

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P    C  I+ G  K   +         M    + P++V +N+LI      +    V KA
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINA---CRHQGDVAKA 192

Query: 263 LTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
             + ++     + P+VVT++T++ A      +G  + +F +M +AG+ P+++ ++ L   
Sbjct: 193 WEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSS 252

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           + +    + A      + K G+ PN V+FTT+I G C A ++  A +I+  M    + P 
Sbjct: 253 HFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPT 312

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           +  Y +L+ G   +     A    Q +  KG+RP + T  +V       G  + A R L+
Sbjct: 313 VPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLE 372

Query: 440 SAEEDRQSMPNKKDEIAVESIHRKQNL 466
             ++   ++      + ++   +  NL
Sbjct: 373 VMQQSGIALNAAAYNVLIDEYCKSGNL 399


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/529 (23%), Positives = 234/529 (44%), Gaps = 49/529 (9%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHR---PTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           +  L  K +  EA  IF    EE  R   P + TY  L+  L R+ +  + L +   +E+
Sbjct: 377 LTCLGKKRRVEEALRIF----EEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMER 432

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+ P+ +  N MI+   ++  ++EA  IF+ M D  C P   T+++LI G G  G+ ++
Sbjct: 433 AGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDD 492

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +  L + M    +V P    Y  L+R++      E+   +  +MV +G  PD    NT  
Sbjct: 493 AYSLYEKMLDCGHV-PGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYM 551

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI--------------------------- 210
               + GET +   +  E+  +   P+ R+  I                           
Sbjct: 552 DCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCV 611

Query: 211 --------IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
                   ++ G+CK G +  A + L  MK     P +V + S+I G   I   D +D+A
Sbjct: 612 LDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKI---DRLDEA 668

Query: 263 LTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
             L EE    G+K +VV +S+++D +   G + +   I +++++ G+ P+++ ++ L   
Sbjct: 669 YMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 728

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
            V+A E  +A     SM+     PN + ++ +I+G C   K  +A   +++M ++G+ PN
Sbjct: 729 LVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPN 788

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
             TY T++ G  +A     A  L    +  G  P  ++   + +   +   A +A  + +
Sbjct: 789 TITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFE 848

Query: 440 SAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSEHNGSS 488
                  ++  K   + ++++H+ + L  +      +     S+H   S
Sbjct: 849 ETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKETAKSQHASRS 897



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/432 (24%), Positives = 194/432 (44%), Gaps = 2/432 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK   +   F+ +   G  P  +TYT+++  L +  R    + L  ++E++   P +  +
Sbjct: 279 GKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAY 338

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N MI     +G  DEA  + ++ K  G  P+   YN ++   G   + EE+L++ + M +
Sbjct: 339 NTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR 398

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D    PN  TYNIL+   C +  +  A  +   M  +G+ P+ +T N +     +  +  
Sbjct: 399 D--AVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLE 456

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +   M +    PN  T   ++ G  K G ++DA     +M +    P  +V+ SLI
Sbjct: 457 EACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLI 516

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           + F      +   K    M   G  PD+   +T MD    AG   K + +F ++   G  
Sbjct: 517 RSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFI 576

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD   +SIL  G V+AG   +   +  +M++ G   +   +  VI G+C + K+ +A  +
Sbjct: 577 PDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQL 636

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
            E+M   G  P + TY +++ G  +  +   A  L +  +  G++        + D +  
Sbjct: 637 LEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGK 696

Query: 428 IGLAREAKRVLK 439
           +G   EA  +++
Sbjct: 697 VGRIDEAYLIME 708



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 96/431 (22%), Positives = 198/431 (45%), Gaps = 2/431 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           +P     +F+ + E G+   +  +TTL+    R+ R  + LSL+ +++ + +  D +L+N
Sbjct: 210 EPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYN 269

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
             I+   ++G VD + K F +MK  G  P   TY ++I       + +E+++L + + Q+
Sbjct: 270 VCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQN 329

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           + V P    YN ++  + S    +EA+ ++ +  A G  P  + YN +     +      
Sbjct: 330 RKV-PCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEE 388

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A ++  EM+ + V PN  T  I++   C+EG +  A+     M+   + PN++  N +I 
Sbjct: 389 ALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMID 447

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
                +  +        M++    P+ VTFS+++D     G +     +++ M+  G  P
Sbjct: 448 RLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVP 507

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
              V++ L + + + G  +    I   M   G  P++ +  T +     A + ++  +++
Sbjct: 508 GAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALF 567

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
            ++   G  P+ ++Y  L+ G  +A       EL   M+E+G          V D +   
Sbjct: 568 REINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKS 627

Query: 429 GLAREAKRVLK 439
           G   +A ++L+
Sbjct: 628 GKVNKAYQLLE 638



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 105/451 (23%), Positives = 196/451 (43%), Gaps = 3/451 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L    +  EA  +F  L +    P    Y T++       +F     L+ + +  G 
Sbjct: 307 IGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGS 366

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  I +N ++    +   V+EA++IF++MK     P   TYN LI      GK   +L+
Sbjct: 367 IPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALE 425

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M +   + PN  T NI++   C    +EEA ++   M      P+AVT+++L    
Sbjct: 426 IRDDMER-AGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGL 484

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A  +  +M +    P       ++  + K G  ED  +    M      P+L
Sbjct: 485 GKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDL 544

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            + N+ +       +++        +   G  PD  ++S ++     AGL  +  E+F  
Sbjct: 545 TLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYA 604

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M + G   D H ++ +  G+ ++G+  KA  +L  M+  G  P VV + +VI G     +
Sbjct: 605 MKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDR 664

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++E+    GI  N+  Y +L+ G+G+  +   A  +++ + +KG+ P   T   
Sbjct: 665 LDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 724

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
           + D+        EA    +S  +D +  PN+
Sbjct: 725 LLDALVKAEEINEALICFQSM-KDLKCPPNQ 754



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/421 (22%), Positives = 191/421 (45%), Gaps = 10/421 (2%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E+ H P    Y +L+  + R   F  +  ++ ++   G  P S +   ++  C +S  + 
Sbjct: 120 EKVHCPE--AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLR 177

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           EA  I Q M+    +P  S Y  LI     V +P+  L L   M Q+   + N   +  L
Sbjct: 178 EAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQM-QELGYEVNVHLFTTL 236

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +R +  +  ++ A +++ +M ++ +  D V YN     + + G+   + +   EM+++ +
Sbjct: 237 IRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGL 296

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            P++ T   ++   CK   +++A+    ++++    P    +N++I G+     +   D+
Sbjct: 297 MPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGY---GSAGKFDE 353

Query: 262 ALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
           A  L+E    K   P V+ ++ I+        + +   IF++M +  + P++  ++IL  
Sbjct: 354 AYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILID 412

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
              R G+   A  I   M + G+ PNV+    +I   C A K++ A SI+E M +    P
Sbjct: 413 MLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTP 472

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           N  T+ +L+ G G+  +   A  L + M + G  P       +  S+   G   +  ++ 
Sbjct: 473 NAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIY 532

Query: 439 K 439
           K
Sbjct: 533 K 533



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/304 (22%), Positives = 142/304 (46%), Gaps = 7/304 (2%)

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
           P+A  YN+L    A+  E    E++L EM  +   P+      +V+   K   + +A   
Sbjct: 125 PEA--YNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDI 182

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
           +  M++ +  P    +  LI    ++++ D +      M+E G + +V  F+T++  ++ 
Sbjct: 183 IQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAR 242

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
            G +     + D+M    ++ DI ++++    + +AG+   +      M+ +G+ P+ V 
Sbjct: 243 EGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVT 302

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           +T++I   C A ++  A+ ++E++ +    P    Y T++ GYG A +   A  LL+  +
Sbjct: 303 YTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQK 362

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE-DRQSMPNKKD-EIAVESIHRKQN 465
            KG  P       +      +G  R  +  L+  EE  R ++PN     I ++ + R+  
Sbjct: 363 AKGSIPSVIAYNCI---LTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGK 419

Query: 466 LSAS 469
           L+A+
Sbjct: 420 LNAA 423


>gi|145524846|ref|XP_001448245.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415789|emb|CAK80848.1| unnamed protein product [Paramecium tetraurelia]
          Length = 967

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 189/348 (54%), Gaps = 6/348 (1%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           ITY TL+    R+KR    +SL  ++++ G+KP+ I FN+++++C +   ++ A + F++
Sbjct: 410 ITYNTLIKGCGRKKRLNEAISLFEEMKQIGIKPNRISFNSLLDSCVKCNKMNVAWRYFEE 469

Query: 90  M-KDSGCKPTTSTYNTLIKG----YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
           M K  G  P   TY+ L+ G    + N  +   ++ LL+ + +    KP++  YN L+ A
Sbjct: 470 MRKQYGIFPDNFTYSILVNGIKTNHSNRDELLRAITLLEQIQETGQFKPDEILYNSLIDA 529

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
               N I++   +  +M    I+P +VTY  L +AY +  +   A +M  EM+  ++  N
Sbjct: 530 CVKFNEIQKGMQLFKEMKNKSIEPSSVTYGILIKAYGKMNDLNGAFRMFEEMKQKKIPIN 589

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
           + T G +V    +   ++ A++F+ +MK   +  N V++ ++IKGF  +  ++   K  +
Sbjct: 590 DVTYGCLVDACVRNDRLDQALQFIEQMKSQNLPINTVLYTTIIKGFCKLNQTEEAMKYFS 649

Query: 265 LMEEFG-VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           LM++     P+++T+++++D     GLM +  ++F ++V++ I+PD+  FS L KG+ R 
Sbjct: 650 LMKQNQRTYPNLITYNSLLDGLVKNGLMNQADKLFQELVESTIKPDLITFSTLLKGHCRR 709

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
           G  ++    + +M  Y ++P+  +   ++    N  +    + IY++ 
Sbjct: 710 GNMKRLNETVQTMLHYQINPDESLLQLILESCLNQQQYHNGVQIYDQF 757



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/408 (24%), Positives = 197/408 (48%), Gaps = 10/408 (2%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSL-ISKVEKDGMKPDSILFNAMINACSESGNVDEAM 84
           +P   TYTTL+  L         L+  + +  K   +PD I++N +++AC  +G+++   
Sbjct: 334 KPDNFTYTTLINGLKNSDNMDLRLAFQLFEEYKQYNQPDQIIYNCLLDACINAGDLNRGF 393

Query: 85  KIFQKMKDS-GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           ++  +MK S   +    TYNTLIKG G   +  E++ L + M Q   +KPN  ++N L+ 
Sbjct: 394 QLLNEMKQSQSIQLDEITYNTLIKGCGRKKRLNEAISLFEEMKQ-IGIKPNRISFNSLLD 452

Query: 144 AWCSKNSIEEAWNVVYKMVAS-GIQPDAVTYNTLARA----YAQYGETYRAEQMLFEMQN 198
           +    N +  AW    +M    GI PD  TY+ L       ++   E  RA  +L ++Q 
Sbjct: 453 SCVKCNKMNVAWRYFEEMRKQYGIFPDNFTYSILVNGIKTNHSNRDELLRAITLLEQIQE 512

Query: 199 N-QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
             Q +P+E     ++    K   ++  M+    MK   + P+ V +  LIK +  + D +
Sbjct: 513 TGQFKPDEILYNSLIDACVKFNEIQKGMQLFKEMKNKSIEPSSVTYGILIKAYGKMNDLN 572

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
           G  +    M++  +  + VT+  ++DA      + +  +  + M    +  +  +++ + 
Sbjct: 573 GAFRMFEEMKQKKIPINDVTYGCLVDACVRNDRLDQALQFIEQMKSQNLPINTVLYTTII 632

Query: 318 KGYVRAGEPQKAESILTSMRK-YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
           KG+ +  + ++A    + M++    +PN++ + +++ G      M +A  +++++ E  I
Sbjct: 633 KGFCKLNQTEEAMKYFSLMKQNQRTYPNLITYNSLLDGLVKNGLMNQADKLFQELVESTI 692

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
            P+L T+ TLL G+       R  E +Q M    + P +S +QL+ +S
Sbjct: 693 KPDLITFSTLLKGHCRRGNMKRLNETVQTMLHYQINPDESLLQLILES 740



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 140/302 (46%), Gaps = 14/302 (4%)

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M  +  ++P   T N ++  +   N  ++AW     +  +  +PD  TY TL    
Sbjct: 288 LLTFMRDNAKIQPTIVTINTMIDQYFKNNQKDKAWKTFENLKLTSTKPDNFTYTTLINGL 347

Query: 181 AQYGE-TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHP 238
                   R    LFE      +P++     ++      G++    + L  MK+ + +  
Sbjct: 348 KNSDNMDLRLAFQLFEEYKQYNQPDQIIYNCLLDACINAGDLNRGFQLLNEMKQSQSIQL 407

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           + + +N+LIKG         +++A++L EE    G+KP+ ++F++++D+      M    
Sbjct: 408 DEITYNTLIKG---CGRKKRLNEAISLFEEMKQIGIKPNRISFNSLLDSCVKCNKMNVAW 464

Query: 296 EIFDDMVKA-GIEPDIHVFSILAKG----YVRAGEPQKAESILTSMRKYG-VHPNVVMFT 349
             F++M K  GI PD   +SIL  G    +    E  +A ++L  +++ G   P+ +++ 
Sbjct: 465 RYFEEMRKQYGIFPDNFTYSILVNGIKTNHSNRDELLRAITLLEQIQETGQFKPDEILYN 524

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
           ++I       ++Q+ M ++++M    I P+  TY  L+  YG+      A  + + M++K
Sbjct: 525 SLIDACVKFNEIQKGMQLFKEMKNKSIEPSSVTYGILIKAYGKMNDLNGAFRMFEEMKQK 584

Query: 410 GV 411
            +
Sbjct: 585 KI 586


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 181/371 (48%), Gaps = 6/371 (1%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           + G +  + TY  L+  L  +K +    ++  ++ K G+ P++  FN +I + + +   D
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +A+  F+ MK   CKP   T+  L+      G  E++ ++   M     V P+   +  +
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           VR       ++EA  V  +M   G  PDA+ YNT+    A+ G    A ++L  M     
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            P E T GI+V+  CK G +E A      M      PN V++ SLI GF     S  + +
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGF---AKSGRMKE 348

Query: 262 ALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
           A +L +E    G +PDV+T + ++D    +G   +  + F++M++ G +P++  ++ + +
Sbjct: 349 ACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQ 408

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           G  + G    A  I+  M  +G  P+ V +  ++ G+C   ++  A  + +++ +   +P
Sbjct: 409 GLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSP 468

Query: 379 NLKTYETLLWG 389
           NL+ Y +L+ G
Sbjct: 469 NLQLYSSLVKG 479



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 118/478 (24%), Positives = 216/478 (45%), Gaps = 49/478 (10%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F+ ++E G+RP +IT+T ++  L +   F+       ++ + G KP+ + +
Sbjct: 344 GRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTY 403

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I   S+ G V  A +I + M   GC P + TY  L+ G+  +G+ +E+ +LL  + +
Sbjct: 404 TTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDK 463

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIE----------------------------------- 152
             +  PN + Y+ LV+  C   S+E                                   
Sbjct: 464 CSS-SPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRL 522

Query: 153 -EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY--RAEQMLFEMQNNQVRPNERTCG 209
            EA  +  +MV+ G +PDA TYN L     +  E    RA  +L +++     P+  T  
Sbjct: 523 DEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYT 582

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            +  G CK G ++ A++ L        + ++V + +L  G         VD+A++L +E 
Sbjct: 583 PLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCY---QGQVDRAVSLFQEM 639

Query: 270 ---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              G  PD   +  I++       +    + FD+M+  G +P +  ++ L +    AG  
Sbjct: 640 VRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNV 699

Query: 327 QKAESILTSMRKYG-VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            +A      M   G +  +V+++  +I G+C A+K+  A+ ++E M   G  P   T  +
Sbjct: 700 DEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSAS 759

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           L  G   + +  +A+ELLQ M   G  P  +T   + D  R    + E+ ++LK  +E
Sbjct: 760 LFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRK---SDESGKLLKLVQE 814



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 160/353 (45%), Gaps = 43/353 (12%)

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML--F 194
           TYN L+    ++ +  + + +  +M+ +GI P+  ++N L R++A+   T RA+  +  F
Sbjct: 121 TYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFAR---TRRADDAVTCF 177

Query: 195 E-MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHPNLVVFNSLIKGFLD 252
           E M+  + +P+  T  I+V   CK G  E A    + M  +  V P+  +  ++++  L 
Sbjct: 178 EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLK 237

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG----------------------- 289
            K      +    ME+ G  PD + ++T++D  + AG                       
Sbjct: 238 AKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVT 297

Query: 290 ------------LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
                        + + +E+F  M  +G  P+  +++ L  G+ ++G  ++A S+   M 
Sbjct: 298 YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV 357

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
           + G  P+V+  T +I G C +   ++A   +E+M   G  PN+ TY T++ G  +  +  
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            A  +++ M   G  P   T   + D +  +G   EA ++L   ++   S PN
Sbjct: 418 NAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSS-PN 469



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 1/173 (0%)

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           E+ G + DV T++ +M+   +     +C  I ++M+KAGI P+   F+IL + + R    
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG-INPNLKTYET 385
             A +    M++    P++  F  ++   C A   ++A  ++ +M  +G + P+   +  
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           ++    +AK+   A E+   ME+ G  P       + D     G A+EA +VL
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL 283



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 76/146 (52%), Gaps = 8/146 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTR----QKRFKSILSLISKVE 56
           +N L+   K  +A   F+ +I +G +PT+ TYT LV AL       + F     ++++ E
Sbjct: 655 INGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGE 714

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
             G     ++++A+I+   ++  VD A+K+F+ M   G  PT  T  +L  G    GK E
Sbjct: 715 LVG---SVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTE 771

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILV 142
           ++ +LLQ M+   +  P+  T+  ++
Sbjct: 772 KAQELLQEMAAGGS-PPHAATFTAIL 796


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 171/322 (53%), Gaps = 3/322 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G  P+++T+TTL+  L  + +   ++ L   +   G++P+   +N +IN+ S+SG 
Sbjct: 123 ILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGK 182

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
            +EA+   ++M+  GC P    Y+TLI GY   G+ +E+  +  LM   K   PN  TY 
Sbjct: 183 ANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVS-KGCTPNVYTYT 241

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+  +C    IEEA  ++ + +  G+ PD VT+ T+     + G    A+Q+   +  +
Sbjct: 242 SLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAH 301

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI-KDSDG 258
              PN  T G+++ G CK GN+E+A      M+   V PNLV++  LI       K  DG
Sbjct: 302 GHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDG 361

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
            +    L++E G+KP+V T++ ++ A    GL+ +  ++F  M + G  PD   ++++ +
Sbjct: 362 KELFSRLIDE-GLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQ 420

Query: 319 GYVRAGEPQKAESILTSMRKYG 340
           G+++  +P  A  ++  M   G
Sbjct: 421 GFLQHKDPSMARQLVEEMVNRG 442



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/397 (22%), Positives = 189/397 (47%), Gaps = 1/397 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P ++ ++ L +++ R   +++++ L  ++E  G++ D    + +IN       VD  + +
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             K+   G +P+  T+ TL+ G    GK ++ + L   M   + ++PN  TYN+++ +  
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLV-RGLQPNVYTYNVIINSLS 178

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                 EA   + +M   G  P+ V Y+TL   Y   G+   A  +   M +    PN  
Sbjct: 179 KSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVY 238

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   +++GYCK   +E+A++ L       + P++V F ++I G           +    +
Sbjct: 239 TYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYI 298

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              G  P+++T+  ++D     G + +   +F +M ++ ++P++ +++IL     + G+ 
Sbjct: 299 CAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKI 358

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           +  + + + +   G+ PNV  +T ++   C    +  A  ++ KM E G  P+   Y  +
Sbjct: 359 KDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVI 418

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           + G+ + K P  A +L++ M  +G     +T  L+ D
Sbjct: 419 IQGFLQHKDPSMARQLVEEMVNRGFSADAATRALLND 455



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 82/367 (22%), Positives = 178/367 (48%), Gaps = 7/367 (1%)

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL---LQLMSQDKNVKPNDRT 137
           D+A+  F+ M      P    ++ L      +G  E  + L   ++ +  ++++     +
Sbjct: 44  DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDI----HS 99

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
            +IL+  +C  + ++   +V+ K++  G++P  VT+ TL       G+  +   +  +M 
Sbjct: 100 LSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDML 159

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
              ++PN  T  +I++   K G   +A+ FL +M+++   PN+V +++LI G+      D
Sbjct: 160 VRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMD 219

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
                  LM   G  P+V T++++M+ +     + +  ++ D+ ++ G+ PDI  F+ + 
Sbjct: 220 EARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTII 279

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            G  RAG P  A+ +   +  +G  PN++ +  ++ G C    ++ A +++++M    + 
Sbjct: 280 SGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVK 339

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           PNL  Y  L+    +  +    +EL   + ++G++P   T   +  +    GL  EA ++
Sbjct: 340 PNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKL 399

Query: 438 LKSAEED 444
            +  EED
Sbjct: 400 FRKMEED 406



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 142/309 (45%), Gaps = 1/309 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +GK  +   +++ ++  G +P + TY  ++ +L++  +    L  + ++EK G 
Sbjct: 139 LNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGC 198

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + ++ +I+     G +DEA  +F  M   GC P   TY +L+ GY  + + EE+++
Sbjct: 199 VPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQ 258

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL   +  K + P+  T+  ++   C       A  +   + A G  P+ +TY  L    
Sbjct: 259 LLD-ETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGL 317

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            ++G    A  +  EMQ + V+PN     I++   CK G ++D      R+ +  + PN+
Sbjct: 318 CKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNV 377

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             + +L+             K    MEE G  PD   ++ I+  +         +++ ++
Sbjct: 378 YTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEE 437

Query: 301 MVKAGIEPD 309
           MV  G   D
Sbjct: 438 MVNRGFSAD 446


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 185/403 (45%), Gaps = 10/403 (2%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ- 88
           +TY  L+          +  SL+ +++ +GM+ +    + ++      G V +A++ F  
Sbjct: 26  VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
            ++ +  +P   +Y TLI G   +G+ + +  L + M      +PN  TYN LV   C +
Sbjct: 86  SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 145

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
           + ++ A  V+ +       PD VTYNTL  A  Q G    A     +M      P   + 
Sbjct: 146 DRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSF 205

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             I++G C+   + DA+     M + + HPNLV ++ +I G      SD +D+A  L++ 
Sbjct: 206 NAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLC---KSDQLDEAQQLLDR 262

Query: 269 F---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
               G +PD+V ++ ++  +S+AG +     +   MV  G  PD+  ++++     + G 
Sbjct: 263 MVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGR 322

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
              A  I   +      PNVV ++ +I G+C A ++     +   M E+   PN+ TY T
Sbjct: 323 VDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV---MREMACRPNVVTYNT 379

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           ++WG     +   A  + + M E G  P   T + +  + R I
Sbjct: 380 MIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRMI 422



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 175/378 (46%), Gaps = 11/378 (2%)

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           S+ +N +I     + ++D A  + ++M   G +    T + +++G    G+  ++L+   
Sbjct: 25  SVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFD 84

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS-GIQPDAVTYNTLARAYAQ 182
              +  + +P+  +Y  L+   C    ++ A+++  KMVA+ G +P+A TYN L     +
Sbjct: 85  ASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCK 144

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                 A  ++ E +     P+  T   +++   + G +++A+    +M E    P LV 
Sbjct: 145 QDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVS 204

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           FN++I G    +      +    M +    P++VT+S ++D    +  + + Q++ D MV
Sbjct: 205 FNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMV 264

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G  PD+  ++ L  G+  AG    A  +L  M   G  P+VV +T VI   C   ++ 
Sbjct: 265 SEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVD 324

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST----- 417
            A  I+ ++     +PN+ TY  L+ GY  A    R +E  +VM E   RP   T     
Sbjct: 325 DAHEIFRELVANKCSPNVVTYSALIGGYCRAS---RVDEGGKVMREMACRPNVVTYNTMI 381

Query: 418 --IQLVADSWRAIGLARE 433
             + +V  +  A G+ RE
Sbjct: 382 WGLSMVDRNEEAYGMFRE 399



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 160/327 (48%), Gaps = 5/327 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGH-RPTLITYTTLVAALTRQKRFKSILSLISKVEKDG 59
           +N L   G+   A  +F  ++  G  RP   TY  LV  L +Q R  +  ++I++  K  
Sbjct: 103 INGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRD 162

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
             PD + +N ++ A  + G VDEA+  F +M + G  PT  ++N +I G     +  ++L
Sbjct: 163 FAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADAL 222

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           ++   M  D++  PN  TY++++   C  + ++EA  ++ +MV+ G +PD V Y  L   
Sbjct: 223 EVFNEMI-DRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLG 281

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           ++  G    A  +L  M +    P+  T  +++   CK G ++DA      +   +  PN
Sbjct: 282 FSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPN 341

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +V +++LI G+     +  VD+   +M E   +P+VVT++T++   S      +   +F 
Sbjct: 342 VVTYSALIGGYC---RASRVDEGGKVMREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFR 398

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEP 326
           +M + G  PD   +  L +      +P
Sbjct: 399 EMSECGFVPDARTYRGLKRALRMIDQP 425



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 165/378 (43%), Gaps = 44/378 (11%)

Query: 77  SGNVDEAMKIFQKMKDSGCK-PTTS-TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
           +G+ ++A+++F   +++ C+ P +S TYN LI+G+ N    + +  LL+ M  +  ++ N
Sbjct: 4   AGSHNQALQLF---RENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVE-GMQCN 59

Query: 135 DRTYNILVRAWCSKNSIEEAW-NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           DRT +I+++  C    + +A  +    +  +  QPD V+Y TL                 
Sbjct: 60  DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTL----------------- 102

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHPNLVVFNSLIKGFLD 252
                             ++G CK G ++ A     +M       PN   +N+L+ G   
Sbjct: 103 ------------------INGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCK 144

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
               D     +T   +    PDVVT++T+M A    G + +    F  M + G  P +  
Sbjct: 145 QDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVS 204

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           F+ +  G  RA     A  +   M     HPN+V ++ VI G C + ++  A  + ++M 
Sbjct: 205 FNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMV 264

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
             G  P+L  Y  L+ G+  A +   A  LL+ M  +G  P   T  +V D    +G   
Sbjct: 265 SEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVD 324

Query: 433 EAKRVLKSAEEDRQSMPN 450
           +A  + +    ++ S PN
Sbjct: 325 DAHEIFRELVANKCS-PN 341



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/272 (21%), Positives = 107/272 (39%), Gaps = 79/272 (29%)

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV----- 271
           + G+   A++ L+R    ++  + V +N LI+GF +  D   +D A +L+ E  V     
Sbjct: 3   RAGSHNQALQ-LFRENPCQLPASSVTYNVLIRGFCNASD---LDAAFSLLREMDVEGMQC 58

Query: 272 ----------------------------------KPDVVTFSTIMDAWSSAGLMGKCQEI 297
                                             +PDVV+++T+++     G +    ++
Sbjct: 59  NDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDL 118

Query: 298 FDDMVKAG------------------------------------IEPDIHVFSILAKGYV 321
           F  MV AG                                      PD+  ++ L     
Sbjct: 119 FRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALF 178

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           + G   +A +  T M + G  P +V F  +I+G C A ++  A+ ++ +M +   +PNL 
Sbjct: 179 QLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLV 238

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           TY  ++ G  ++ Q   A++LL  M  +G RP
Sbjct: 239 TYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRP 270



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 3/112 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +AH IF  L+     P ++TY+ L+    R  R      ++ ++     +P+ + +
Sbjct: 321 GRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTY 377

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           N MI   S     +EA  +F++M + G  P   TY  L +    + +P   L
Sbjct: 378 NTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRMIDQPPHVL 429


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 201/397 (50%), Gaps = 9/397 (2%)

Query: 11  HEAHYIFNCLIEEGHR--PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           HEA  +   +I  G R  P L+TY+TL++   +  + +    L+ +V   G++PD++++ 
Sbjct: 62  HEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYT 121

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            ++ +  +S  + EA+++ ++M  +GC PT  T+NTLI G       E +  LLQ M+  
Sbjct: 122 KVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA- 180

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
             VK +  TYN L+   C    ++EA  ++ +M ASG  PD V Y++      + G+   
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHPNLVVFNSLI 247
           A Q+L +M+++   PN  T   I+ G CK G ++ A+  + +M   +    N+V +++++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G   +  +      +  M   G +PDVVT+S++++    AG + +  E   +M   G +
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYG-----VHPNVVMFTTVISGWCNAVKMQ 362
           P+   +  L  G    G   +AE ++  M   G       P+V  +  +I G C A ++ 
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRID 420

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
            A+  +++M   G +P+  +Y T++ G   + +  +A
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 217/437 (49%), Gaps = 19/437 (4%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK--PDS 64
           +G+P +   +   +   G +P +++Y  L+  L + +R+     L+  +   G +  PD 
Sbjct: 23  QGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDL 82

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           + ++ +++   ++G V+E+ ++ +++   G +P    Y  ++       +  E+L+LL+ 
Sbjct: 83  VTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEE 142

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M +     P   T+N L+   C + ++E A +++  M ASG++ D VTYNTL     + G
Sbjct: 143 MIR-AGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAG 201

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
               AEQ+L  M+ +   P+       V G CK G + +A + L +M++ +  PN+V +N
Sbjct: 202 RLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYN 261

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEF----GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +++ G      S  +D AL +ME+     G   +VV +ST++D     G   + + + + 
Sbjct: 262 TILDGLC---KSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEA 318

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M +AG  PD+  +S L  G  +AG+ ++A   +  M   G  PN V + +++ G C+  +
Sbjct: 319 MARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGR 378

Query: 361 MQRAMSIYEKMCEIGIN-----PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK- 414
           +  A  + E+M   G       P++ TY  L+ G  +A +   A +  Q M  +G  P  
Sbjct: 379 LAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDG 438

Query: 415 ---KSTIQLVADSWRAI 428
               + ++ +A S RA+
Sbjct: 439 VSYSTIVEGLARSGRAL 455



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 176/353 (49%), Gaps = 4/353 (1%)

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M  +GC P + T+N L+ G+   G+P +  +LL+ M+  + ++PN  +YN L+   C   
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAA-RGIQPNVVSYNGLLEGLCKLE 59

Query: 150 SIEEAWNVVYKMVASGIQ--PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
              EA  +V  M++ G +  PD VTY+TL   Y + G+   + ++L E+ +  +RP+   
Sbjct: 60  RWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALM 119

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
              +++  CK   + +A+  L  M      P L+ FN+LI G    K+ +  D  L  M 
Sbjct: 120 YTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMA 179

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
             GVK DVVT++T+MD    AG + + +++ + M  +G  PD+  +S    G  ++G+  
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVL 239

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI-GINPNLKTYETL 386
            A  +L  MR     PNVV + T++ G C + K+  A+ + E+M    G   N+  Y T+
Sbjct: 240 NAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTV 299

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + G  +  +   A  +++ M   G RP   T   + +     G   EA   ++
Sbjct: 300 VDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVR 352



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 192/386 (49%), Gaps = 4/386 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P  +T+  LV   ++Q R      L+  +   G++P+ + +N ++    +     EA
Sbjct: 5   GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEA 64

Query: 84  MKIFQKMKDSGCK--PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
            ++ + M   G +  P   TY+TL+ GY   GK EES +LL+ +   + ++P+   Y  +
Sbjct: 65  EELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVIS-RGLRPDALMYTKV 123

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           + + C    + EA  ++ +M+ +G  P  +T+NTL     +      A+ +L  M  + V
Sbjct: 124 MASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGV 183

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           + +  T   ++ G CK G +++A + L RMK     P++V ++S + G           +
Sbjct: 184 KADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQ 243

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA-GIEPDIHVFSILAKGY 320
            L  M +    P+VVT++TI+D    +G +    E+ + M  + G   ++  +S +  G 
Sbjct: 244 VLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGL 303

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            + G  Q+A S++ +M + G  P+VV ++++++G C A K++ A+    +M   G  PN 
Sbjct: 304 CKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNA 363

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVM 406
            TY +L+ G     +   AE +++ M
Sbjct: 364 VTYCSLVHGLCSCGRLAEAERMVEEM 389



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 114/253 (45%), Gaps = 42/253 (16%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKV-EKDGMKP 62
           L   GK   AH +   + +  H P ++TY T++  L +  +  + L ++ ++   DG   
Sbjct: 232 LCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGL 291

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           + + ++ +++   + G   EA  + + M  +GC+P   TY++L+ G    GK EE+++ +
Sbjct: 292 NVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAV 351

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG-----IQPDAVTYNTLA 177
           + M+ +   KPN  TY  LV   CS   + EA  +V +M + G       P   TYN L 
Sbjct: 352 REMAME-GCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNAL- 409

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
                                             + G CK G ++DA++F  RM+     
Sbjct: 410 ----------------------------------IGGLCKAGRIDDALKFFQRMRSQGCD 435

Query: 238 PNLVVFNSLIKGF 250
           P+ V ++++++G 
Sbjct: 436 PDGVSYSTIVEGL 448


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/411 (24%), Positives = 200/411 (48%), Gaps = 2/411 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G+  +A  + + ++  G  P ++TY  L+ A  + + ++  L LI  +  +G 
Sbjct: 170 IHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGC 229

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+++ +N +I+A    G+VD+A ++   +   GCKP T  YNT++KG+ ++ +  ++ +
Sbjct: 230 EPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADE 289

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L  M ++ N  PN+ T N+++   C K  +++    + KM   G   + VTYN +    
Sbjct: 290 ILDEMVRE-NCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGM 348

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A ++L  MQ+   +P+  T   ++ G C     EDA   + +M + +  P+ 
Sbjct: 349 CEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDN 408

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             FN++I  +          +    M E G  P+  T+STI+   + AG M +  E+ ++
Sbjct: 409 STFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNE 468

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G   D  ++ +L +   +  + ++   ++  ++  G+ P  V++ TV+ G C   K
Sbjct: 469 MANKGFNTD-KMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGK 527

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
              A+ +   M   G  P+  TY  L+ G         A ELL  +  + V
Sbjct: 528 TDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDV 578



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/432 (24%), Positives = 204/432 (47%), Gaps = 10/432 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+P +A  +       G   T  TY  LV    R    +    ++  +        
Sbjct: 106 LCRRGRPADAARVVEAC---GPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASS 162

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +   N +I+A  E G V +A+ +   M   GC P   TYN L++         ++L+L+ 
Sbjct: 163 AYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELID 222

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + +  +PN+ TYN+++ A C +  +++A  ++  + + G +P+ V YNT+ + +   
Sbjct: 223 FM-RAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSI 281

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                A+++L EM      PNE T  +I++  C++G ++    +L +M +     N+V +
Sbjct: 282 ERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTY 341

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N++I G  +  + D   + L+ M+ FG KPD+VT++T++    SA      +E+   M +
Sbjct: 342 NAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQ 401

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
               PD   F+ +   + + G   +A  +   M + G +PN   ++T+I G   A KM++
Sbjct: 402 NDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQ 461

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+ +  +M   G N + K Y  L     +  +     +++  +++ G+ P     Q V  
Sbjct: 462 ALELLNEMANKGFNTD-KMYRVLTESLNKEDKIEEVVQVVHKLQDSGISP-----QTVLY 515

Query: 424 SWRAIGLAREAK 435
           +   +GL R  K
Sbjct: 516 NTVLLGLCRNGK 527



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 207/453 (45%), Gaps = 23/453 (5%)

Query: 36  VAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGC 95
           ++AL  +    + L L+    +    PD  L N ++      G   +A ++ +     G 
Sbjct: 71  LSALIHRGDLDAALRLVGSSPR---PPDVPLANRLVRDLCRRGRPADAARVVEA---CGP 124

Query: 96  KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
           + T +TY  L+ GY   G  E++ +++  M        +   +N L+ A C +  + +A 
Sbjct: 125 EATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQAS-SAYAHNPLIHALCERGRVADAL 183

Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYR-AEQMLFEMQNNQVRPNERTCGIIVSG 214
            V+  M+  G  PD VTYN L +A A  G  YR A +++  M+     PN  T  +I+  
Sbjct: 184 VVLDGMLCRGCAPDVVTYNILLQA-ACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDA 242

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
            C+EG+++ A   L  +      PN V +N+++KGF  I+     D+ L  M      P+
Sbjct: 243 MCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPN 302

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
             T + I++     GL+ K     + M K G   ++  ++ +  G    G    A  +L+
Sbjct: 303 EATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLS 362

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
           +M+ +G  P++V + TV+ G C+A + + A  +  KM +    P+  T+ T++  + +  
Sbjct: 363 NMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKG 422

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL-----KSAEEDR---- 445
              +A E+ + M EKG  P  +T   +       G   +A  +L     K    D+    
Sbjct: 423 LILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYRV 482

Query: 446 --QSMPNKKDEI--AVESIHRKQNLSASNSTFL 474
             +S+ NK+D+I   V+ +H+ Q+   S  T L
Sbjct: 483 LTESL-NKEDKIEEVVQVVHKLQDSGISPQTVL 514



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 124/225 (55%), Gaps = 7/225 (3%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +P ++TY T++  L    R++    L+ K+ ++   PD+  FN +I+   + G + +A
Sbjct: 368 GCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQA 427

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            ++F++M + GC P ++TY+T+I G    GK E++L+LL  M+ +K     D+ Y +L  
Sbjct: 428 FEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMA-NKGFN-TDKMYRVLTE 485

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           +   ++ IEE   VV+K+  SGI P  V YNT+     + G+T  A  +L +M +    P
Sbjct: 486 SLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMP 545

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           +E T  I++ G   EG  ++A   L R+   +     V+ NSLIK
Sbjct: 546 DESTYIILIEGLFYEGYSKEARELLSRLCSRD-----VLSNSLIK 585


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/473 (22%), Positives = 214/473 (45%), Gaps = 78/473 (16%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  +++ +++ G  P  + Y TL+  L +   F   L+L   +   G+      F
Sbjct: 291 GDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAF 350

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL-------- 119
           N MIN   + G +D A + F++M++ GCKP   TY TL  GY  VG  EE+         
Sbjct: 351 NTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEK 410

Query: 120 ------------------------KLLQLMSQ--DKNVKPNDRTYNILVRAWCSKNSIEE 153
                                   KL+ L+++   + + PN  TY  L+  WC +  +++
Sbjct: 411 EEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDK 470

Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM---------------QN 198
           A++  ++M+  G  P+ +  + +  +  + G    A  +L +M               QN
Sbjct: 471 AFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQN 530

Query: 199 NQVR--------------------PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
             +R                    PN     I ++G CK G + DA RF   +      P
Sbjct: 531 ADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTP 590

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           +   + +LI GF     +  V++A  L +E    G+ P++ T++ +++    +G + + +
Sbjct: 591 DNFTYCTLIHGF---SAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRAR 647

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
            +FD +   G+ P++  ++IL  GY ++G P++A  +   M K G+ P+++ ++++I+G+
Sbjct: 648 RLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGF 707

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG---YGEAKQPWRAEELLQV 405
           C    ++ AM +  +M    ++  + T+  L+ G   +G+ K+  +   ++ +
Sbjct: 708 CKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMMHM 760



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 101/422 (23%), Positives = 206/422 (48%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV +G+ + A  +++ +      P + T   +V A  +  + +  +  + ++EK G + +
Sbjct: 41  LVKRGESYSAVLVYDQMRRLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELN 100

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ +N++++     G+++ A  + + M + G      T   LIKGY    K EE+ K+L+
Sbjct: 101 AVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLR 160

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M ++  V  ++  Y  L+  +C    + +A  V  +M+  G++ +    N+L   Y + 
Sbjct: 161 EMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKN 220

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+ +  E++L  M+   ++P+  +   +V GYC++G    A     +M    + P +V +
Sbjct: 221 GQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTY 280

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+L+KG     D     +   LM + GV P+ V + T++D     G   +   ++DD++ 
Sbjct: 281 NTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILA 340

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GI   I+ F+ +  G  + GE   A+     M + G  P+ + + T+  G+C    ++ 
Sbjct: 341 RGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEE 400

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  I EKM +  I P+++ Y +L+ G   +K+  +  +LL  M+ +G+ P   T   +  
Sbjct: 401 AFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIA 460

Query: 424 SW 425
            W
Sbjct: 461 GW 462



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 193/390 (49%), Gaps = 2/390 (0%)

Query: 46  KSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTL 105
           K+ L +   + K G KP     N++++   + G    A+ ++ +M+     P   T   +
Sbjct: 13  KNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCAIM 72

Query: 106 IKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
           +  Y   GK E +++ ++ M +    + N  +YN LV  + S   IE A  V+  M   G
Sbjct: 73  VNAYCKAGKVERAVEFVREMEK-LGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKG 131

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN-NQVRPNERTCGIIVSGYCKEGNMEDA 224
           +  + VT   L + Y +  +   AE++L EM+  + V  +E   G ++ GYCK G M DA
Sbjct: 132 VMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDA 191

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
           +R    M ++ +  NL V NSLI G+         ++ L  M +  +KPD  ++ T++D 
Sbjct: 192 IRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDG 251

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           +   GL  K   + D M++ GIEP +  ++ L KG  R G+ + A  +   M + GV PN
Sbjct: 252 YCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPN 311

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
            V + T++ G        RA+++++ +   GIN ++  + T++ G  +  +   A+E  +
Sbjct: 312 EVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFK 371

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
            MEE G +P   T + ++D +  +G   EA
Sbjct: 372 RMEELGCKPDGITYRTLSDGYCKVGNVEEA 401



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 186/377 (49%), Gaps = 2/377 (0%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK-DGMKPD 63
           V  G    A  +   + E+G     +T T L+    +Q + +    ++ ++EK DG+  D
Sbjct: 112 VSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVD 171

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              + A+I+   + G + +A+++  +M   G K      N+LI GY   G+  E  +LL 
Sbjct: 172 EYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLM 231

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +  ++KP+  +Y  LV  +C      +A+NV  +M+  GI+P  VTYNTL +   ++
Sbjct: 232 CMRK-LDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRF 290

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A ++   M    V PNE     ++ G  K G+   A+     +    ++ ++  F
Sbjct: 291 GDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAF 350

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N++I G   + + DG  +    MEE G KPD +T+ T+ D +   G + +  +I + M K
Sbjct: 351 NTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEK 410

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
             I P I +++ L  G   + +  K   +L  M   G+ PNVV +  +I+GWC+  ++ +
Sbjct: 411 EEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDK 470

Query: 364 AMSIYEKMCEIGINPNL 380
           A S Y +M   G  PN+
Sbjct: 471 AFSAYFEMIGKGFAPNV 487



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 109/466 (23%), Positives = 198/466 (42%), Gaps = 36/466 (7%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  + + +++ G +  L    +L+    +  +      L+  + K  +KPDS  +
Sbjct: 186 GKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSY 245

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +++     G   +A  +  +M   G +PT  TYNTL+KG    G  +++L+L  LM Q
Sbjct: 246 CTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQ 305

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + V PN+  Y  L+           A  +   ++A GI      +NT+     + GE  
Sbjct: 306 -RGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMD 364

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A++    M+    +P+  T   +  GYCK GN+E+A +   +M++ E+ P++ ++NSLI
Sbjct: 365 GAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLI 424

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G    K    +   L  M+  G+ P+VVT+  ++  W   G + K    + +M+  G  
Sbjct: 425 VGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFA 484

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV---H---------------------- 342
           P++ + S +     R G   +A  +L  M  + +   H                      
Sbjct: 485 PNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADT 544

Query: 343 ----------PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
                     PN V++   ++G C + K+  A   +  +      P+  TY TL+ G+  
Sbjct: 545 LDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSA 604

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           A     A  L   M  KG+ P  +T   + +     G    A+R+ 
Sbjct: 605 AGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLF 650



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 153/329 (46%), Gaps = 42/329 (12%)

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           ++++ +  K  ++ A +V   M   G +P   + N+L     + GE+Y A  +  +M+  
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            + P+  TC I+V+ YCK G +E A+ F+  M++L    N V +NSL+ G++ + D +G 
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 260 DKALTLMEEFGVKPDVVT------------------------------------FSTIMD 283
              L  M E GV  + VT                                    +  ++D
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
            +   G MG    + D+M+K G++ ++ V + L  GY + G+  + E +L  MRK  + P
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKP 240

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG---YGEAKQPWRAE 400
           +   + T++ G+C      +A ++ ++M   GI P + TY TLL G   +G+ K   R  
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALR-- 298

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
            L  +M ++GV P +     + D    +G
Sbjct: 299 -LWHLMLQRGVTPNEVGYCTLLDGLFKMG 326



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 1/189 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK ++A   F  L      P   TY TL+   +         +L  ++   G+ P+
Sbjct: 567 LCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPN 626

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +NA++N   +SG +D A ++F K+   G  P   TYN LI GY   G P E+L L  
Sbjct: 627 ITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRG 686

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M ++  + P+  TY+ L+  +C ++ +EEA  ++ +M AS +     T++ L     Q+
Sbjct: 687 KMLKE-GISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQH 745

Query: 184 GETYRAEQM 192
           G+  +  ++
Sbjct: 746 GDVKKMSKL 754



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 83/164 (50%)

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           I+  ++  G++     +FD+M K G +P +   + L    V+ GE   A  +   MR+  
Sbjct: 2   ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLD 61

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
           + P+V     +++ +C A K++RA+    +M ++G   N  +Y +L+ GY        A+
Sbjct: 62  IVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAK 121

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
            +L+ M EKGV   K T+ L+   +       EA++VL+  E++
Sbjct: 122 GVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKE 165



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 65/125 (52%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G    A  +F+ L  +G  P ++TY  L+    +    +  L L  K+ K+G+
Sbjct: 634 LNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGI 693

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  I ++++IN   +  +V+EAMK+  +MK S    T +T++ L++G    G  ++  K
Sbjct: 694 SPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSK 753

Query: 121 LLQLM 125
           L  +M
Sbjct: 754 LHNMM 758



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 1/137 (0%)

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
           ++ K Y   G  + A  +  +M KYG  P++    +++S      +   A+ +Y++M  +
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
            I P++ T   ++  Y +A +  RA E ++ ME+ G      +   + D + ++G    A
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 435 KRVLKSAEEDRQSMPNK 451
           K VLK   E +  M NK
Sbjct: 121 KGVLKFMSE-KGVMRNK 136


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 181/371 (48%), Gaps = 6/371 (1%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           + G +  + TY  L+  L  +K +    ++  ++ K G+ P++  FN +I + + +   D
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +A+  F+ MK   CKP   T+  L+      G  E++ ++   M     V P+   +  +
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           VR       ++EA  V  +M   G  PDA+ YNT+    A+ G    A ++L  M     
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            P E T GI+V+  CK G +E A      M      PN V++ SLI GF     S  + +
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGF---AKSGRMKE 348

Query: 262 ALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
           A +L +E    G +PDV+T + ++D    +G   +  + F++M++ G +P++  ++ + +
Sbjct: 349 ACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQ 408

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           G  + G    A  I+  M  +G  P+ V +  ++ G+C   ++  A  + +++ +   +P
Sbjct: 409 GLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSP 468

Query: 379 NLKTYETLLWG 389
           NL+ Y +L+ G
Sbjct: 469 NLQLYSSLVNG 479



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/478 (24%), Positives = 216/478 (45%), Gaps = 49/478 (10%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F+ ++E G+RP +IT+T ++  L +   F+       ++ + G KP+ + +
Sbjct: 344 GRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTY 403

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I   S+ G V  A +I + M   GC P + TY  L+ G+  +G+ +E+ +LL  + +
Sbjct: 404 TTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDK 463

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIE----------------------------------- 152
             +  PN + Y+ LV   C   S+E                                   
Sbjct: 464 CSS-SPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRL 522

Query: 153 -EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY--RAEQMLFEMQNNQVRPNERTCG 209
            EA  +  +MV+ G +PDA TYN L     +  E    RA  +L +++     P+  T  
Sbjct: 523 DEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYT 582

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            +  G CK G ++ A++ L        + ++V + +L  G         VD+A++L +E 
Sbjct: 583 PLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCY---QGQVDRAVSLFQEM 639

Query: 270 ---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              G  PD   +  I++       +    + FD+M+  G +P +  ++ L +    AG  
Sbjct: 640 VRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNV 699

Query: 327 QKAESILTSMRKYG-VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            +A     SM   G +  +V+++  +I G+C A+K+  A+ ++E M   G  P   T  +
Sbjct: 700 DEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSAS 759

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           L  G   + +  +A+ELLQ M   G  P  +T   + D  R    + E+ ++LK  +E
Sbjct: 760 LFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRK---SDESGKLLKLVQE 814



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/419 (24%), Positives = 194/419 (46%), Gaps = 8/419 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA  + + ++ +   PT +TY  LV +L +    +    L   +   G +P+
Sbjct: 270 LAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPN 329

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           S+++ ++I+  ++SG + EA  +F +M ++G +P   T+  +I G    G  E++ K  +
Sbjct: 330 SVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFE 389

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +    KPN  TY  +++       +  A+ ++  M+A G  PD+VTY  L   + + 
Sbjct: 390 EMMRG-GCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKL 448

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE---VHPNL 240
           G    A Q+L E+      PN +    +V+G C  G++E  +  L+   +     + P L
Sbjct: 449 GRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGL 508

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW--SSAGLMGKCQEIF 298
               S+I G       D   +    M   G KPD  T++ +++    S    + +   + 
Sbjct: 509 CC--SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALL 566

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
            D+ K G  PD   ++ L  G  + GE  +A  +L      G + +VV +T + +G C  
Sbjct: 567 HDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQ 626

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            ++ RA+S++++M   G  P+   Y  ++ G  + K+   A +    M  KG +P  +T
Sbjct: 627 GQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVAT 685



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 160/353 (45%), Gaps = 43/353 (12%)

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML--F 194
           TYN L+    ++ +  + + +  +M+ +GI P+  ++N L R++A+   T RA+  +  F
Sbjct: 121 TYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFAR---TRRADDAVTCF 177

Query: 195 E-MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHPNLVVFNSLIKGFLD 252
           E M+  + +P+  T  I+V   CK G  E A    + M  +  V P+  +  ++++  L 
Sbjct: 178 EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLK 237

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG----------------------- 289
            K      +    ME+ G  PD + ++T++D  + AG                       
Sbjct: 238 AKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVT 297

Query: 290 ------------LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
                        + + +E+F  M  +G  P+  +++ L  G+ ++G  ++A S+   M 
Sbjct: 298 YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV 357

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
           + G  P+V+  T +I G C +   ++A   +E+M   G  PN+ TY T++ G  +  +  
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            A  +++ M   G  P   T   + D +  +G   EA ++L   ++   S PN
Sbjct: 418 NAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSS-PN 469



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 1/173 (0%)

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           E+ G + DV T++ +M+   +     +C  I ++M+KAGI P+   F+IL + + R    
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG-INPNLKTYET 385
             A +    M++    P++  F  ++   C A   ++A  ++ +M  +G + P+   +  
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           ++    +AK+   A E+   ME+ G  P       + D     G A+EA +VL
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL 283



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 77/146 (52%), Gaps = 8/146 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTR----QKRFKSILSLISKVE 56
           +N L+   K  +A   F+ +I +G +PT+ TYT LV AL       + F    S++++ E
Sbjct: 655 INGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGE 714

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
             G     ++++A+I+   ++  VD A+K+F+ M   G  PT  T  +L  G    GK E
Sbjct: 715 LVG---SVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTE 771

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILV 142
           ++ +LLQ M+   +  P+  T+  ++
Sbjct: 772 KAQELLQEMAAGGS-PPHAATFTAIL 796


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 192/400 (48%), Gaps = 4/400 (1%)

Query: 25  HRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAM 84
           HRP+  +   L+A L   KR            +  + PD   FN +I+     G + +A 
Sbjct: 152 HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
            + + +K  G  P+ +TYN+LI GY   G  G       LL+ M +   + P   T+ +L
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVE-AGISPTAVTFGVL 270

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +  +C  ++   A  V  +M   GI    VTYN+L       G+     +++ EM++  +
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            PNE T G ++ G+CK+G M DA  ++  M E  V P++V++N LI  +  +   +    
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMA 390

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
               M + G+ P+V T++ ++  +S +G       + D+M + GIE D+  +++L     
Sbjct: 391 VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALC 450

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
             GE +KA  +L  M + G+ PN + + T+I G+C+   ++ A  I  +M +     N+ 
Sbjct: 451 CKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVV 510

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           TY   +  + +  +   A +LL  M +K + P   T + +
Sbjct: 511 TYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI 550



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 194/393 (49%), Gaps = 5/393 (1%)

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P +   NA++     +  VD A K F+        P   T+NT+I G   +G+  ++  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV---VYKMVASGIQPDAVTYNTLA 177
           + + + +   + P+  TYN L+  +C K      ++V   + +MV +GI P AVT+  L 
Sbjct: 213 VAKDI-KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
             Y +   T  A ++  EM+   +  +  T   ++SG C EG +E+ ++ +  M++L + 
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           PN + F  ++KGF         +  +  M E  V+PDVV ++ ++D +   G M     +
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAV 391

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            + M K GI P++  ++ L  G+ R+G+ + A  +L  M++ G+  +VV +  +I   C 
Sbjct: 392 KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCC 451

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             ++++A+ + ++M E+G+ PN  TY T++ G+ +      A E+   ME+   R    T
Sbjct: 452 KGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVT 511

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
             +    +  IG   EA  +L     D+  +PN
Sbjct: 512 YNVFIKYFCQIGKMDEANDLLNEM-LDKCLVPN 543



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 160/319 (50%), Gaps = 1/319 (0%)

Query: 6   GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
           G G  +    +   ++E G  PT +T+  L+    +     + + +  ++++ G+    +
Sbjct: 241 GAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVV 300

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            +N++I+     G V+E +K+ ++M+D G  P   T+  ++KG+   G   ++   +  M
Sbjct: 301 TYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGM 360

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           ++ +NV+P+   YNIL+  +     +E+A  V   M   GI P+  TYN L   +++ G+
Sbjct: 361 TE-RNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGD 419

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A  +L EM+   +  +  T  +++   C +G +  A++ L  M E+ + PN + +N+
Sbjct: 420 WRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNT 479

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           +I+GF D  +     +  T ME+   + +VVT++  +  +   G M +  ++ ++M+   
Sbjct: 480 IIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKC 539

Query: 306 IEPDIHVFSILAKGYVRAG 324
           + P+   +  + +G +  G
Sbjct: 540 LVPNGITYETIKEGMMEKG 558



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 106/217 (48%), Gaps = 1/217 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG   +A+   + + E    P ++ Y  L+    R  + +  +++   + K G+ P+   
Sbjct: 347 KGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTT 406

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I   S SG+   A  +  +MK+ G +    TYN LI      G+  +++KLL  MS
Sbjct: 407 YNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMS 466

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +   ++PN  TYN +++ +C K +I+ A+ +  +M     + + VTYN   + + Q G+ 
Sbjct: 467 E-VGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKM 525

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED 223
             A  +L EM +  + PN  T   I  G  ++G   D
Sbjct: 526 DEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562


>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial [Vitis vinifera]
 gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 209/424 (49%), Gaps = 3/424 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKS--ILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
           +G     + Y+ ++ +LTR  +  S  +  + +++E D ++ D  L N +I   ++SG+V
Sbjct: 213 DGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDV 272

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           + AM     ++ +G  P T+T   +I   GN G+ EE+  + + + ++  + P  R YN 
Sbjct: 273 NRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEEL-KEGGLMPRTRAYNA 331

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L++ +    S+++A ++V +M  SG  PD  TY+ L  AYA  G    A  +L EM+ + 
Sbjct: 332 LLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASG 391

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           VRPN      I++ Y   G  + + + L  M+   V P+   +N +I  F      D   
Sbjct: 392 VRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHAL 451

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
                M   GV+PD VT++T++D    +G   K +E+F+ M ++G  P    ++I+   +
Sbjct: 452 ATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSF 511

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
                 +  +++L  M+  G+  NVV +TT++  +  + + + A+   E M  +G+ P+ 
Sbjct: 512 GEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSS 571

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
             Y  L+  Y +     +A    +VM   G++P    +  + +++       EA  VL+ 
Sbjct: 572 TMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQY 631

Query: 441 AEED 444
            +E+
Sbjct: 632 MKEN 635



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 187/365 (51%), Gaps = 1/365 (0%)

Query: 49  LSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
           +S ++ V+ +G+ P +    A+I A   +G  +EA  IF+++K+ G  P T  YN L+KG
Sbjct: 276 MSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKG 335

Query: 109 YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP 168
           Y   G  +++  ++  M +     P++ TY++L+ A+ +    E A  V+ +M ASG++P
Sbjct: 336 YVKTGSLKDAESIVSEMER-SGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRP 394

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           ++  ++ +  +Y   G+  ++ Q+L EM+N+ V P+     +++  + K   ++ A+   
Sbjct: 395 NSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATF 454

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
            RM+   V P+ V +N+LI         +  ++    M+E G  P   T++ +++++   
Sbjct: 455 DRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQ 514

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
                 + +   M   G+  ++  ++ L   Y ++G  + A   L  M+  G+ P+  M+
Sbjct: 515 ERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMY 574

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
             +I+ +      ++A++ +  M   G+ P++    +L+  +GE ++   A  +LQ M+E
Sbjct: 575 NALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKE 634

Query: 409 KGVRP 413
             ++P
Sbjct: 635 NDLKP 639



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/442 (22%), Positives = 207/442 (46%), Gaps = 10/442 (2%)

Query: 2   NILVGKGKPHEAHYIFNCLI---EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           +I+VG  K  + +   + L      G  P   T   ++ AL    R +   ++  ++++ 
Sbjct: 261 DIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEG 320

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+ P +  +NA++    ++G++ +A  I  +M+ SG  P   TY+ LI  Y N G+ E +
Sbjct: 321 GLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESA 380

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
             +L+ M +   V+PN   ++ ++ ++  +   ++++ V+ +M  SG+ PD   YN +  
Sbjct: 381 RIVLKEM-EASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMID 439

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            + +      A      M+   V+P+  T   ++  +CK G+   A      M+E    P
Sbjct: 440 TFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSP 499

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
               +N +I  F + +  + V   L  M+  G+  +VVT++T++D +  +G      E  
Sbjct: 500 CTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECL 559

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           + M   G++P   +++ L   Y + G  ++A +    MR  G+ P+V++  ++I+ +   
Sbjct: 560 EVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGED 619

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            +   A S+ + M E  + P++ TY TL+      ++  +   + + M   G  P +   
Sbjct: 620 RRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDRKAR 679

Query: 419 QLVADSWRAIGLAREAKRVLKS 440
            ++  + R +      +R LKS
Sbjct: 680 AMLRSALRYM------ERTLKS 695



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/235 (20%), Positives = 102/235 (43%), Gaps = 2/235 (0%)

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG--VDKALT 264
           T   ++    +  ++E A+  + RM+      + V ++ +I+       SD   + K   
Sbjct: 186 TYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYA 245

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            +E   ++ D    + I+  ++ +G + +       +   G+ P       +      AG
Sbjct: 246 EIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAG 305

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
             ++AE+I   +++ G+ P    +  ++ G+     ++ A SI  +M   G +P+  TY 
Sbjct: 306 RTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYS 365

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            L+  Y  A +   A  +L+ ME  GVRP       +  S+R  G  +++ +VL+
Sbjct: 366 LLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLR 420



 Score = 46.2 bits (108), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 20/97 (20%), Positives = 48/97 (49%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    +G   +A   F  +  +G +P+++   +L+ A    +R     S++  ++++ +
Sbjct: 578 INAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDL 637

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKP 97
           KPD + +  ++ A       D+   ++++M  SGC P
Sbjct: 638 KPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTP 674


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/486 (24%), Positives = 215/486 (44%), Gaps = 6/486 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N  V   +  EAH +    +E    P  I YTT++    +  +      L+ ++++ G+
Sbjct: 83  LNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGV 142

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K D +L + +I      G +DEA++ F+ M +  C P   TYNT++ G     + +E+L+
Sbjct: 143 KMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNTVVNGLCKANRIDEALE 201

Query: 121 LLQLMSQ----DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           L   M +        +P+  +Y+ ++ A C    +++A+    +M A G  P+ VTY++L
Sbjct: 202 LFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSL 261

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
                +        ++L  M+      N      ++    K    E A +F  R+ +   
Sbjct: 262 IDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGK 321

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            PN+V +N  + G       D   + L  M E  V PDV+T+S+I+D +  AG M K  +
Sbjct: 322 KPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADD 381

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F  M+     P    F  L  G+    + ++A  +   M   G  P +  +  ++   C
Sbjct: 382 VFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVC 441

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
            A  ++ A+ IY KM      P+  TY  L+     A++   A+E L VME   V P  +
Sbjct: 442 GADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGA 501

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQI 476
               + +     G   EA  VL +  E       +  +I VE ++ ++   A+ S  L+ 
Sbjct: 502 ICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAA-SKLLRS 560

Query: 477 PGVVSS 482
           PG V+ 
Sbjct: 561 PGFVAD 566



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 203/439 (46%), Gaps = 22/439 (5%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +    T   L+ A  + KR +    L+ +  +    P+ I++  +IN   ++G VD+A
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            ++  +MK+ G K     ++TLI+G    G+ +E+L+  Q  S  +   PN  TYN +V 
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALE--QFKSMGEECSPNVITYNTVVN 188

Query: 144 AWCSKNSIEEAWNVVYKM-----VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
             C  N I+EA  +   M      + G +PD ++Y+T+  A  +     +A +    M+ 
Sbjct: 189 GLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRA 248

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
               PN  T   ++ G CK     + +  L  MKE     N++ FN+++        +D 
Sbjct: 249 VGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALW---KNDE 305

Query: 259 VDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            +KA    E     G KP+VVT++  +     AG + +   I  +MV++ + PD+  +S 
Sbjct: 306 QEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSS 365

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           +  G+ +AG   KA+ + T M  +   P+ V F T++ G+    K + A  ++E M   G
Sbjct: 366 IIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAG 425

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST----IQLVADSWRAIGLA 431
             P L+TY  L+     A     A E+   M+ K  +P  +T    IQ +  + R     
Sbjct: 426 FIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARR----V 481

Query: 432 REAKRVLKSAEEDRQSMPN 450
            EAK  L   E D   +PN
Sbjct: 482 DEAKEFLDVMEAD-NVVPN 499



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/532 (23%), Positives = 216/532 (40%), Gaps = 107/532 (20%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK-----D 58
           L  KG+  EA   F  + EE   P +ITY T+V  L +  R    L L   +EK      
Sbjct: 156 LCRKGRIDEALEQFKSMGEECS-PNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASH 214

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G +PD I ++ +I+A  ++  VD+A + F++M+  GC P   TY++LI G   V +P E 
Sbjct: 215 GCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSEC 274

Query: 119 LKLLQLMSQ--------DKNV--------------------------KPNDRTYNILVRA 144
           L+LL  M +        D N                           KPN  TYN+ V  
Sbjct: 275 LELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHG 334

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
            C    ++EA+ ++ +MV S + PD +TY+++   + + G   +A+ +   M  ++  P+
Sbjct: 335 LCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPH 394

Query: 205 ERTCGIIVSGY-----------------------------------CKEGNMEDAMRFLY 229
             T   ++ G+                                   C   ++E A+   +
Sbjct: 395 PVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYH 454

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
           +MK  +  P+   +  LI+     +  D   + L +ME   V P+      +++     G
Sbjct: 455 KMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQG 514

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAK------------------GYV---------- 321
            + +   + D++V+ G +P    F IL +                  G+V          
Sbjct: 515 EVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCV 574

Query: 322 ----RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
               +AG+P +A  ++  M   GV P+   +  V+   C   +++ A++ +EKM   G  
Sbjct: 575 AEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCA 634

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           P L TY  L+     A     A  + + M   G  P+  T++ ++   R  G
Sbjct: 635 PGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 686



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 185/373 (49%), Gaps = 9/373 (2%)

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           K G + ++     ++NA  ++   +EA ++ ++  +  C P    Y T+I G+   G+ +
Sbjct: 69  KPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVD 128

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           ++ +LL  M +++ VK +   ++ L++  C K  I+EA    +K +     P+ +TYNT+
Sbjct: 129 QAFELLDEM-KERGVKMDVLLHSTLIQGLCRKGRIDEALE-QFKSMGEECSPNVITYNTV 186

Query: 177 ARAYAQYGETYRAEQMLFEMQ-----NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
                +      A ++  +M+     ++   P+  +   ++   CK   ++ A  +  RM
Sbjct: 187 VNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRM 246

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA-WSSAGL 290
           + +   PN+V ++SLI G   +       + L  M+E G   +++ F+ ++ A W +   
Sbjct: 247 RAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQ 306

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
              CQ  F+ ++K+G +P++  +++   G  +AG   +A  IL  M +  V P+V+ +++
Sbjct: 307 EKACQ-FFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSS 365

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I G+C A +M +A  ++ +M      P+  T+ TLL G+ E K+   A  + + M   G
Sbjct: 366 IIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAG 425

Query: 411 VRPKKSTIQLVAD 423
             P   T  ++ D
Sbjct: 426 FIPGLQTYNVLMD 438



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 166/355 (46%), Gaps = 27/355 (7%)

Query: 106 IKGYGNVGKPEESLKLLQLMSQDKNV----------KP----NDRTYNILVRAWCSKNSI 151
           + GY +   PE + ++LQ + +D +V          KP    N  T  +L+ A+      
Sbjct: 34  LAGYASTVTPEVAGRVLQQV-EDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRH 92

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           EEA  ++ + +     P+ + Y T+   + + G+  +A ++L EM+   V+ +      +
Sbjct: 93  EEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTL 152

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF-- 269
           + G C++G +++A+     M E E  PN++ +N+++ G      ++ +D+AL L ++   
Sbjct: 153 IQGLCRKGRIDEALEQFKSMGE-ECSPNVITYNTVVNGLC---KANRIDEALELFDDMEK 208

Query: 270 ------GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
                 G +PDV+++ST++DA   A  + K  E F  M   G  P++  +S L  G  + 
Sbjct: 209 RYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKV 268

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
             P +   +L  M++ G   N++ F  ++       + ++A   +E++ + G  PN+ TY
Sbjct: 269 DRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTY 328

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
              + G  +A +   A  +L  M E  V P   T   + D +   G   +A  V 
Sbjct: 329 NVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVF 383


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/467 (23%), Positives = 218/467 (46%), Gaps = 2/467 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A  I   ++E+G  P ++TY+ L+  + R  +      ++S+++K G+ P+ +L+
Sbjct: 378 GEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLY 437

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I    ++G V  A+K F  +   G       +N L++ +   G   E+    Q MS+
Sbjct: 438 TTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSR 497

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
             N+  N  ++N ++ ++C +  I EA++V   MV  G  P+  TY  L R   Q G   
Sbjct: 498 -MNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLV 556

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A+Q +F + +     +E+T   ++ G CK G +++A+    +M +    P++  +  L+
Sbjct: 557 QAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILL 616

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV-KAGI 306
            GF            L +M E GV PD V ++ +++   + G +     +F +++ K G+
Sbjct: 617 SGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGL 676

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
             D   ++ L  GY++ G     + +++ M +  V+PN   +  ++ G+    +  +++ 
Sbjct: 677 YADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLY 736

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           +Y+ M   GI P+  TY  L+ G  E      A + L+ M  +G+ P K    ++  S+ 
Sbjct: 737 LYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFS 796

Query: 427 AIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF 473
                  A R+    +    S  +K     +  + RK  L  S+   
Sbjct: 797 EKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVL 843



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 188/373 (50%), Gaps = 1/373 (0%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           TY T++    ++ RFK+ L ++  +E+D ++ D   +N MI+          A  + ++M
Sbjct: 191 TYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRM 250

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
           +     P   TYNTLI G+   GK   +  +   M + + + P+  TY  ++  +C    
Sbjct: 251 RKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLR-QTLVPSVATYTTMIDGYCRNRR 309

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           I++A +V+ +M  +G+ P  +TY+ L   Y +      A  ++ ++++  +  N+  C I
Sbjct: 310 IDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTI 369

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++ G+C+ G +  A + L  M E  + P++V +++LI G   +       + L+ M++ G
Sbjct: 370 LIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSG 429

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           + P+ V ++T++  +  AG +    + F D+ + G+  +  + + L + + R G   +AE
Sbjct: 430 ILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAE 489

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
                M +  +  N V F  +I  +C+  K+  A S+Y+ M   G +PN+ TY+ LL G 
Sbjct: 490 HFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGL 549

Query: 391 GEAKQPWRAEELL 403
            +     +A++ +
Sbjct: 550 CQGGHLVQAKQFM 562



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/434 (23%), Positives = 193/434 (44%), Gaps = 40/434 (9%)

Query: 19  CLIEEGHRPTL----ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINAC 74
           C++E+  R ++     TY  ++  L R KR      L+ ++ KD + PD   +N +IN  
Sbjct: 210 CVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGF 269

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
              G ++ A  +F  M      P+ +TY T+I GY    + +++L +L  M +   V P+
Sbjct: 270 FGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEM-EITGVMPS 328

Query: 135 DRTYN-----------------------------------ILVRAWCSKNSIEEAWNVVY 159
           + TY+                                   IL+  +C    I +A  ++ 
Sbjct: 329 ELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILK 388

Query: 160 KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEG 219
            M+  GI PD VTY+ L     +  + +  +++L  MQ + + PN+     ++  YCK G
Sbjct: 389 SMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAG 448

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
            ++ A++    +    +  N V+ N+L++ F         +     M    +  + V+F+
Sbjct: 449 YVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFN 508

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
            I+D++   G + +   ++DDMV+ G  P++  +  L +G  + G   +A+  +  +   
Sbjct: 509 CIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDI 568

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
               +   F  ++ G C    +  A+ I EKM +    P++ TY  LL G+    +   A
Sbjct: 569 PSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPA 628

Query: 400 EELLQVMEEKGVRP 413
             +LQ+M EKGV P
Sbjct: 629 LVMLQMMLEKGVVP 642



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/438 (23%), Positives = 216/438 (49%), Gaps = 12/438 (2%)

Query: 7    KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE-KDGMKPDSI 65
            KGK   A  +   ++E+G  P  + YT L+  L  + + K+   +  ++  K+G+  D I
Sbjct: 622  KGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCI 681

Query: 66   LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
             +N+++N   + GNV+   ++   M  +   P +++YN L+ GY   G+  +SL L + M
Sbjct: 682  AYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYM 741

Query: 126  SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
             + K ++P++ TY +L+        I+ A   + KMV  GI PD + ++ L  ++++  +
Sbjct: 742  VR-KGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSK 800

Query: 186  TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
             + A ++   M+   + P+ +T   +++G  ++  ++ +   L+ M ++ + PN   + +
Sbjct: 801  MHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIA 860

Query: 246  LIKGFLDIKDSDGVDKALTLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
            L+     + +   +D+A  L EE    G+ P  V  S+I+      G + +   +F +M+
Sbjct: 861  LVNAKCRVGE---IDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMM 917

Query: 303  KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
            ++G+ P +  F+ L     +  +   A  +   M    +  +VV +  +I+G C    + 
Sbjct: 918  RSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHIS 977

Query: 363  RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ--- 419
             A+ +Y +M   G+ PN+ TY TL        +    EELL+ +EE+G+ P    ++   
Sbjct: 978  DALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIPAFKQLENLE 1037

Query: 420  -LVADSWRAIGLAREAKR 436
              + D+ R + + R  ++
Sbjct: 1038 RRMEDAIRRLNMIRRCRK 1055



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 117/510 (22%), Positives = 213/510 (41%), Gaps = 72/510 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N   G+GK + A  +FN ++ +   P++ TYTT++    R +R    LS++S++E  G+
Sbjct: 266 INGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGV 325

Query: 61  KPDSILFNAMINA----------------------------CS-------ESGNVDEAMK 85
            P  + ++A++N                             C+       + G + +A +
Sbjct: 326 MPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQ 385

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           I + M + G  P   TY+ LI G   + K  E+ ++L  M Q   + PND  Y  L+  +
Sbjct: 386 ILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRM-QKSGILPNDVLYTTLICYY 444

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C    ++ A      +   G+  + V +N L RA+ + G    AE     M    +  N 
Sbjct: 445 CKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNS 504

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            +   I+  YC  G + +A      M      PN+  + +L++G           + +  
Sbjct: 505 VSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFC 564

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           + +     D  TF+ ++      G + +  +I + MVK    PDIH ++IL  G+ R G+
Sbjct: 565 LLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGK 624

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY-EKMCEIG--------- 375
              A  +L  M + GV P+ V +T +++G  N  +++ A  ++ E +C+ G         
Sbjct: 625 ILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYN 684

Query: 376 --------------------------INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
                                     + PN  +Y  L+ GY +  Q  ++  L + M  K
Sbjct: 685 SLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRK 744

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           G+RP   T +L+       GL   A + L+
Sbjct: 745 GIRPDNVTYRLLILGLSECGLIDIAVKFLE 774



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 217/457 (47%), Gaps = 6/457 (1%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            G   EA  I   +++    P + TYT L++   R+ +    L ++  + + G+ PD++ +
Sbjct: 588  GTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAY 647

Query: 68   NAMINACSESGNVDEAMKIFQKMK-DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
              ++N     G V  A  +FQ++    G       YN+L+ GY   G      +++  M 
Sbjct: 648  TCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMY 707

Query: 127  QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            Q++ V PN  +YNIL+  +  +    ++  +   MV  GI+PD VTY  L    ++ G  
Sbjct: 708  QNE-VYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLI 766

Query: 187  YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
              A + L +M    + P++    I+++ + ++  M +A+R    MK L + P+   F+++
Sbjct: 767  DIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAM 826

Query: 247  IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
            I G +     D   + L  M + G++P+   +  +++A    G + +   + ++M   GI
Sbjct: 827  INGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGI 886

Query: 307  EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
             P     S + +G  R G+ ++A  + ++M + G+ P V  FTT++   C   K+  A+ 
Sbjct: 887  VPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALH 946

Query: 367  IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
            +   M    +  ++ +Y  L+ G  + K    A +L   M+ KG+ P  +T   +  +  
Sbjct: 947  LKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMY 1006

Query: 427  AIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRK 463
            + G  +  + +L+  EE R  +P  K    +E++ R+
Sbjct: 1007 STGRMQNGEELLEDIEE-RGLIPAFKQ---LENLERR 1039



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/417 (23%), Positives = 195/417 (46%), Gaps = 8/417 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G + + +   +++ AL  +   K +   + +        D    N ++N+   +G   +A
Sbjct: 115 GFKASPVACNSILKALVEEGESKYVWLFLRESLARKFPLDVTTCNILLNSLCTNGEFRKA 174

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
             + QKMK S C   ++TYNT++  Y   G+ + +L +L+ M +D +++ +  TYNI++ 
Sbjct: 175 EDMLQKMK-SCCLSNSATYNTILHWYVKKGRFKAALCVLEDMERD-SIQADIYTYNIMID 232

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C       A+ ++ +M    + PD  TYNTL   +   G+   A  +   M    + P
Sbjct: 233 KLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVP 292

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   ++ GYC+   ++ A+  L  M+   V P+ + +++L+ G+  +     +  AL
Sbjct: 293 SVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKV---SMLGPAL 349

Query: 264 TLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
            LM +    G+  +    + ++D +   G + K ++I   M++ GI+PD+  +S L  G 
Sbjct: 350 DLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGM 409

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            R  +  + + IL+ M+K G+ PN V++TT+I  +C A  ++ A+  +  +   G+  N 
Sbjct: 410 CRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANP 469

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
             +  LL  +        AE   Q M    +     +   + DS+   G   EA  V
Sbjct: 470 VIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSV 526



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/444 (23%), Positives = 198/444 (44%), Gaps = 51/444 (11%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLV------AALTRQKRFK-SILSLISKVEKDG 59
           +GK  EA  +++ ++  GH P + TY  L+        L + K+F   +L + S V    
Sbjct: 517 RGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAV---- 572

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
              D   FNA++    + G +DEA+ I +KM  + C P   TY  L+ G+   GK   +L
Sbjct: 573 ---DEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPAL 629

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA------------------------- 154
            +LQ+M  +K V P+   Y  L+    ++  ++ A                         
Sbjct: 630 VMLQMM-LEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMN 688

Query: 155 -------WNVVYKMVASGIQ----PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
                   N + +M++   Q    P++ +YN L   Y + G+  ++  +   M    +RP
Sbjct: 689 GYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRP 748

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T  +++ G  + G ++ A++FL +M    + P+ +VF+ LI  F +        +  
Sbjct: 749 DNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLF 808

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M+   + P   TFS +++       + +  E+  +M++ G++P+   +  L     R 
Sbjct: 809 NCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRV 868

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           GE  +A  +   M+  G+ P  V  +++I G C   K++ A+ ++  M   G+ P + T+
Sbjct: 869 GEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATF 928

Query: 384 ETLLWGYGEAKQPWRAEELLQVME 407
            TL+    +  +   A  L ++ME
Sbjct: 929 TTLMHSLCKESKIADALHLKRLME 952



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 172/367 (46%), Gaps = 8/367 (2%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           + +  L+ A  ++++       +  ++  G K   +  N+++ A  E G   E+  ++  
Sbjct: 86  VVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEG---ESKYVWLF 142

Query: 90  MKDSGCKP---TTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           +++S  +      +T N L+      G+  ++  +LQ M        N  TYN ++  + 
Sbjct: 143 LRESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKS--CCLSNSATYNTILHWYV 200

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            K   + A  V+  M    IQ D  TYN +     +   + RA  +L  M+ + + P+E 
Sbjct: 201 KKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDEC 260

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   +++G+  EG +  A      M    + P++  + ++I G+   +  D     L+ M
Sbjct: 261 TYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEM 320

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           E  GV P  +T+S +++ +    ++G   ++  D+   GI  +  + +IL  G+ + GE 
Sbjct: 321 EITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEI 380

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            KA+ IL SM + G+ P+VV ++ +I+G C   KM     I  +M + GI PN   Y TL
Sbjct: 381 SKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTL 440

Query: 387 LWGYGEA 393
           +  Y +A
Sbjct: 441 ICYYCKA 447



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 152/309 (49%), Gaps = 3/309 (0%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            M+  V +G+  ++ Y++  ++ +G RP  +TY  L+  L+        +  + K+  +G+
Sbjct: 722  MHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGI 781

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             PD ++F+ +I + SE   +  A+++F  MK     P++ T++ +I G       ++S +
Sbjct: 782  FPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHE 841

Query: 121  LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            +L  M Q   ++PN   Y  LV A C    I+ A+ +  +M A GI P  V  +++ R  
Sbjct: 842  VLHEMLQ-VGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGL 900

Query: 181  AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
             + G+   A  +   M  + + P   T   ++   CKE  + DA+     M+   +  ++
Sbjct: 901  CRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDV 960

Query: 241  VVFNSLIKGFL-DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            V +N LI G   D   SD +D     M+  G+ P+V T+ T+  A  S G M   +E+ +
Sbjct: 961  VSYNVLITGLCKDKHISDALD-LYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLE 1019

Query: 300  DMVKAGIEP 308
            D+ + G+ P
Sbjct: 1020 DIEERGLIP 1028



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/324 (22%), Positives = 151/324 (46%), Gaps = 3/324 (0%)

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+++S+  +   N   + +L++A+  +  + +A   V+ M   G +   V  N++ +A 
Sbjct: 73  LLRIISRFDST--NHVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKAL 130

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + GE+      L E    +   +  TC I+++  C  G    A   L +MK   +  N 
Sbjct: 131 VEEGESKYVWLFLRESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSCCL-SNS 189

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +N+++  ++           L  ME   ++ D+ T++ ++D         +   +   
Sbjct: 190 ATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKR 249

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M K  + PD   ++ L  G+   G+   A  +   M +  + P+V  +TT+I G+C   +
Sbjct: 250 MRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRR 309

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           + +A+S+  +M   G+ P+  TY  LL GY +      A +L+  ++ +G+   K+   +
Sbjct: 310 IDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTI 369

Query: 421 VADSWRAIGLAREAKRVLKSAEED 444
           + D +  +G   +AK++LKS  ED
Sbjct: 370 LIDGFCQVGEISKAKQILKSMLED 393



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/350 (22%), Positives = 157/350 (44%), Gaps = 3/350 (0%)

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
            +  LIK Y    K  ++   +  M  D   K +    N +++A   +   +  W  + +
Sbjct: 87  VFELLIKAYVKERKVLDAAVAVFFM-DDCGFKASPVACNSILKALVEEGESKYVWLFLRE 145

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
            +A     D  T N L  +    GE  +AE ML +M++  +  N  T   I+  Y K+G 
Sbjct: 146 SLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSCCL-SNSATYNTILHWYVKKGR 204

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
            + A+  L  M+   +  ++  +N +I     IK S      L  M +  + PD  T++T
Sbjct: 205 FKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNT 264

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           +++ +   G +   + +F+ M++  + P +  ++ +  GY R     KA S+L+ M   G
Sbjct: 265 LINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITG 324

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
           V P+ + ++ +++G+C    +  A+ +   +   GI  N      L+ G+ +  +  +A+
Sbjct: 325 VMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAK 384

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           ++L+ M E G+ P   T   + +    +    E K +L S  +    +PN
Sbjct: 385 QILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEIL-SRMQKSGILPN 433


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 212/449 (47%), Gaps = 46/449 (10%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            V  G+  +AH +F  ++E+G  P ++   +++  L + K      S++ K+   G+ PD
Sbjct: 220 FVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPD 279

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              ++ +I+   +S  +D+A ++ ++M ++G +P + TYN+LI GY   G   ES+++ +
Sbjct: 280 LFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 339

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY---------- 173
            MS    V P     N  + A        EA  +   MV  G +PD ++Y          
Sbjct: 340 QMSS-CGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYW 398

Query: 174 ----------------------------NTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                                       N L  AYA+ G   +A  +  +MQN  + P+ 
Sbjct: 399 YVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 458

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   ++S  C+ G ++DA+     M ++ V P+  V+  LI+G  +  +   + KA  L
Sbjct: 459 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE---LVKAKEL 515

Query: 266 MEEFGVK----PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           + E   K    P V  FS+I++     G + + ++I D MV+ G  P++  F+ L +GY 
Sbjct: 516 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYC 575

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
             G  ++A ++L +M   G+ PN  ++ T++ G+C   ++  A++++  M   G+ P   
Sbjct: 576 LVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV 635

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKG 410
            Y  +L G  +A++   A+++   M E G
Sbjct: 636 LYSIILHGLFQARRTTAAKKMFHEMIESG 664



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 203/424 (47%), Gaps = 25/424 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTT----------LVAALTRQKRFKSILS 50
           ++ L   G+ +EA  IF+ ++ +G +P +I+Y+T           V  +     F  +L+
Sbjct: 357 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLT 416

Query: 51  LISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG 110
                   G+ P+  +FN +INA +  G +D+AM IF+ M++ G  P T T+ T+I    
Sbjct: 417 -------KGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 469

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
            +G+ +++L     M  D  V P++  Y  L++  C+   + +A  ++ +M+   I P  
Sbjct: 470 RIGRLDDALHKFNHMV-DIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG 528

Query: 171 VTY-NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
           V Y +++     + G     + ++  M     RPN  T   ++ GYC  GNME+A   L 
Sbjct: 529 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD 588

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWS 286
            M  + + PN  ++ +L+ G+     +  +D ALT+  +    GVKP  V +S I+    
Sbjct: 589 AMASIGIEPNCYIYGTLVDGYC---KNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLF 645

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
            A      +++F +M+++G    IH + ++  G  R     +A  +L  +    V  +++
Sbjct: 646 QARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII 705

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            F  VIS      + Q A  +++ +   G+ PN++TY  ++    + +    A+ L   +
Sbjct: 706 TFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISV 765

Query: 407 EEKG 410
           E+ G
Sbjct: 766 EKSG 769



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 94/427 (22%), Positives = 193/427 (45%)

Query: 14  HYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA 73
           H IFN ++ +G  P    +  L+ A  R       + +   ++  GM PD++ F  +I++
Sbjct: 408 HNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISS 467

Query: 74  CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP 133
               G +D+A+  F  M D G  P+ + Y  LI+G  N G+  ++ +L+  M       P
Sbjct: 468 LCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPP 527

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
             + ++ ++   C +  + E  +++  MV +G +P+ VT+N+L   Y   G    A  +L
Sbjct: 528 GVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALL 587

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
             M +  + PN    G +V GYCK G ++DA+     M    V P  V+++ ++ G    
Sbjct: 588 DAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQA 647

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
           + +    K    M E G    + T+  ++          +   + + +    ++ DI  F
Sbjct: 648 RRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITF 707

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           +I+     + G  Q+A+ +  ++  YG+ PN+  ++ +I+        + A +++  + +
Sbjct: 708 NIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEK 767

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
            G   + +    ++       +  +A   L ++ E  +  + STI L+A  +   G  RE
Sbjct: 768 SGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYRE 827

Query: 434 AKRVLKS 440
             ++L +
Sbjct: 828 HIKLLPA 834



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 181/390 (46%), Gaps = 40/390 (10%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT+ TY  L+    R  R    L+++ ++ K+G+ PD   + ++I    + G VD+A  +
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 232

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F +M + G  P     N++IK    + + +++  ++Q M  D  + P+  TY++++   C
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMV-DSGIAPDLFTYSLIIDGLC 291

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
              ++++A  V+ +MV +G +P+++TYN+L   Y+  G    + ++  +M +  V P   
Sbjct: 292 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 351

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
            C   +    K G   +A                 +F+S++                   
Sbjct: 352 NCNSFIHALFKHGRTNEAK---------------CIFDSMVLK----------------- 379

Query: 267 EEFGVKPDVVTFSTIMD---AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
              G KPD++++ST       W    +      IF+ M+  GI P+ HVF+IL   Y R 
Sbjct: 380 ---GPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARC 436

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G   KA  I   M+  G+ P+ V F TVIS  C   ++  A+  +  M +IG+ P+   Y
Sbjct: 437 GMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVY 496

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             L+ G     +  +A+EL+  M  K + P
Sbjct: 497 GCLIQGCCNHGELVKAKELISEMMNKDIPP 526



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/289 (19%), Positives = 137/289 (47%), Gaps = 1/289 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +G+  E   I + +++ G RP ++T+ +L+         +   +L+  +   G+
Sbjct: 536 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGI 595

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+  ++  +++   ++G +D+A+ +F+ M   G KPT+  Y+ ++ G     +   + K
Sbjct: 596 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKK 655

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M +      +  TY +++   C  N  +EA  ++ K+ A  ++ D +T+N +  A 
Sbjct: 656 MFHEMIE-SGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 714

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A+++   +    + PN +T  ++++   KE + E+A      +++     + 
Sbjct: 715 FKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDS 774

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
            + N +++  L+  +       L+++ E  +  +  T S +   +S  G
Sbjct: 775 RLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 823



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 128/298 (42%), Gaps = 12/298 (4%)

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
           P   TYN L   Y +         ++  +  N + P++ +  +I  G+ K+G ++ A   
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIY-GFVKDGEVDKAHCL 232

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
              M E  V P +++ NS+IK    +K+ D  +  +  M + G+ PD+ T+S I+D    
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
           +  M K + + + MV+AG  P+   ++ L  GY  +G   ++  +   M   GV P V  
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET-----LLWGYGEAKQPWRAEEL 402
             + I       +   A  I++ M   G  P++ +Y T       W        W    +
Sbjct: 353 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMW--HNI 410

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESI 460
             +M  KG+ P K    ++ +++   G+  +A  +     ED Q+     D +   ++
Sbjct: 411 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIF----EDMQNKGMIPDTVTFATV 464



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/313 (18%), Positives = 134/313 (42%), Gaps = 1/313 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P +  +++++  L ++ R      ++  + + G +P+ + FN+++      GN++EA  +
Sbjct: 527 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 586

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
              M   G +P    Y TL+ GY   G+ +++L + + M   K VKP    Y+I++    
Sbjct: 587 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLH-KGVKPTSVLYSIILHGLF 645

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                  A  + ++M+ SG      TY  +     +   T  A  +L ++    V+ +  
Sbjct: 646 QARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII 705

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T  I++S   K G  ++A      +    + PN+  ++ +I   +  +  +  D     +
Sbjct: 706 TFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISV 765

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           E+ G   D    + I+    +   + K       + +  +  +    S+LA  + R G+ 
Sbjct: 766 EKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKY 825

Query: 327 QKAESILTSMRKY 339
           ++   +L +  ++
Sbjct: 826 REHIKLLPAKYQF 838



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 52/115 (45%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F+ +   G  P + TY+ ++  L +++ ++   +L   VEK G   DS L 
Sbjct: 718 GRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLL 777

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           N ++        V +A      + ++      ST + L   +   GK  E +KLL
Sbjct: 778 NHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 832


>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 513

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 184/379 (48%), Gaps = 2/379 (0%)

Query: 36  VAALTRQKRFKSILSLISKVEKDGM-KPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           VA   RQ++++S + +   + +  M KPD   FN +++A   +    EA   F  MK   
Sbjct: 72  VAEFRRQRKWRSAIVIYEWILQGSMFKPDVGCFNMLMDAYGRTKQWTEAENTFHLMKKFQ 131

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
           C PT +++N L+  Y   G+ E + ++L  M ++ N  P   TYN  +       S + A
Sbjct: 132 CLPTETSFNVLMAAYSRGGQLERAERVLHEM-KESNCSPGLVTYNTYLEVLNKSGSWQLA 190

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
            +V  +M   G+ P   T+  +   Y +   + +AE +   M+     P+  T   +++ 
Sbjct: 191 EDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINA 250

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           + +EGN   A      ++ +   P++  +N+L++ +       G  +    M E GVK D
Sbjct: 251 HAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKAD 310

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
            V+++ ++DA+  AGL+   Q I+D M K G +P +    +L   +V+AG    AE+ + 
Sbjct: 311 HVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVR 370

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            +   GV P+  MF +++  + N+ +M +  S+YE M      P++ T  TL+  Y +  
Sbjct: 371 RLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIITLNTLINVYAQGG 430

Query: 395 QPWRAEELLQVMEEKGVRP 413
              RAEE+   +E KG  P
Sbjct: 431 YIERAEEIFNSLESKGFTP 449



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/393 (22%), Positives = 188/393 (47%), Gaps = 10/393 (2%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           F CL      PT  ++  L+AA +R  + +    ++ ++++    P  + +N  +   ++
Sbjct: 130 FQCL------PTETSFNVLMAAYSRGGQLERAERVLHEMKESNCSPGLVTYNTYLEVLNK 183

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
           SG+   A  +F++M++ G  P  +T+  +I  YG      ++  L Q M +     P+  
Sbjct: 184 SGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSM-RKALCPPSLF 242

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           TY  L+ A   + +   A  +  ++ + G  PD  TYN L  AY++ G    A+++   M
Sbjct: 243 TYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETM 302

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
               V+ +  +  I++  + + G + DA      MK++   P +     L+  F+     
Sbjct: 303 LEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRV 362

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
              +  +  +E  GV+PD   F++++ A+ ++G M K + +++ M  +  +PDI   + L
Sbjct: 363 TDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIITLNTL 422

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
              Y + G  ++AE I  S+   G  P+V+ +T+++  +      ++ +S+Y+KM   G 
Sbjct: 423 INVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAYSKRKLYRKCVSVYQKMLIAGC 482

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
            P+  T + LL      + P + +E+  ++E +
Sbjct: 483 IPDRATAKVLL---SSCRGPEQVKEVTDMIETQ 512



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 168/353 (47%), Gaps = 1/353 (0%)

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           ++ S  KP    +N L+  YG   +  E+     LM + + + P + ++N+L+ A+    
Sbjct: 92  LQGSMFKPDVGCFNMLMDAYGRTKQWTEAENTFHLMKKFQCL-PTETSFNVLMAAYSRGG 150

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            +E A  V+++M  S   P  VTYNT      + G    AE +  EMQN  V P   T  
Sbjct: 151 QLERAERVLHEMKESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFT 210

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
           ++++ Y K  +   A      M++    P+L  + +LI       +    ++    ++  
Sbjct: 211 LMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSV 270

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G  PD+ T++ +++A+S  G     +E+F+ M++AG++ D   ++IL   + RAG    A
Sbjct: 271 GFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDA 330

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           ++I  SM+K G  P +     ++S +  A ++  A +   ++  +G+ P+   + +LL  
Sbjct: 331 QAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFNSLLGA 390

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           YG + +  + E L + M+    +P   T+  + + +   G    A+ +  S E
Sbjct: 391 YGNSGRMDKMESLYESMQGSVCKPDIITLNTLINVYAQGGYIERAEEIFNSLE 443



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 166/349 (47%), Gaps = 7/349 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+   A  + + + E    P L+TY T +  L +   ++    +  +++  G+ P    F
Sbjct: 150 GQLERAERVLHEMKESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNTF 209

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQL 124
             MIN   ++ +  +A  +FQ M+ + C P+  TY  LI  +   GN  + EE    LQ 
Sbjct: 210 TLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQS 269

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           +       P+  TYN L+ A+        A  V   M+ +G++ D V+YN L  A+ + G
Sbjct: 270 V----GFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAG 325

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
               A+ +   M+    +P  ++  +++S + K G + DA  F+ R++ + V P+  +FN
Sbjct: 326 LISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFN 385

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           SL+  + +    D ++     M+    KPD++T +T+++ ++  G + + +EIF+ +   
Sbjct: 386 SLLGAYGNSGRMDKMESLYESMQGSVCKPDIITLNTLINVYAQGGYIERAEEIFNSLESK 445

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
           G  PD+  ++ L   Y +    +K  S+   M   G  P+      ++S
Sbjct: 446 GFTPDVMSWTSLMGAYSKRKLYRKCVSVYQKMLIAGCIPDRATAKVLLS 494



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 139/310 (44%), Gaps = 3/310 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L   G    A  +F  +   G  P + T+T ++    +         L   + K   
Sbjct: 178 LEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALC 237

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P    + A+INA +  GN   A +IF +++  G  P   TYN L++ Y   G P  + +
Sbjct: 238 PPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKE 297

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M  +  VK +  +YNIL+ A+     I +A  +   M   G +P   ++  L  A+
Sbjct: 298 VFETM-LEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAF 356

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR-MKELEVHPN 239
            + G    AE  +  +++  V P+      ++  Y   G M D M  LY  M+     P+
Sbjct: 357 VKAGRVTDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRM-DKMESLYESMQGSVCKPD 415

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           ++  N+LI  +      +  ++    +E  G  PDV++++++M A+S   L  KC  ++ 
Sbjct: 416 IITLNTLINVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAYSKRKLYRKCVSVYQ 475

Query: 300 DMVKAGIEPD 309
            M+ AG  PD
Sbjct: 476 KMLIAGCIPD 485



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/305 (21%), Positives = 144/305 (47%), Gaps = 11/305 (3%)

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAV-TYNTLARAYAQY--GETYRAEQMLFE-- 195
           L R+  ++ S ++ W+ +  +      P  V ++  L    A++     +R+  +++E  
Sbjct: 38  LTRSILTQKSPQDVWDALDAL------PRCVGSWEDLMETVAEFRRQRKWRSAIVIYEWI 91

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           +Q +  +P+     +++  Y +     +A    + MK+ +  P    FN L+  +     
Sbjct: 92  LQGSMFKPDVGCFNMLMDAYGRTKQWTEAENTFHLMKKFQCLPTETSFNVLMAAYSRGGQ 151

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            +  ++ L  M+E    P +VT++T ++  + +G     +++F +M   G+ P ++ F++
Sbjct: 152 LERAERVLHEMKESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTL 211

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           +   Y +A    KAE +  SMRK    P++  +T +I+         RA  I+ ++  +G
Sbjct: 212 MINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVG 271

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
             P++ TY  LL  Y     P  A+E+ + M E GV+    +  ++ D++   GL  +A+
Sbjct: 272 FVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQ 331

Query: 436 RVLKS 440
            +  S
Sbjct: 332 AIYDS 336



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/236 (21%), Positives = 105/236 (44%)

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P++  FN L+  +   K     +    LM++F   P   +F+ +M A+S  G + + + +
Sbjct: 99  PDVGCFNMLMDAYGRTKQWTEAENTFHLMKKFQCLPTETSFNVLMAAYSRGGQLERAERV 158

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
             +M ++   P +  ++   +   ++G  Q AE +   M+  GV P V  FT +I+ +  
Sbjct: 159 LHEMKESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGK 218

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           A    +A  +++ M +    P+L TY  L+  +       RAEE+   ++  G  P   T
Sbjct: 219 AHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYT 278

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF 473
              + +++   G    AK V ++  E      +    I +++  R   +S + + +
Sbjct: 279 YNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIY 334



 Score = 42.0 bits (97), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 21/91 (23%), Positives = 45/91 (49%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+    G    A  IFN L  +G  P ++++T+L+ A +++K ++  +S+  K+   G 
Sbjct: 423 INVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAYSKRKLYRKCVSVYQKMLIAGC 482

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMK 91
            PD      ++++C     V E   + +  +
Sbjct: 483 IPDRATAKVLLSSCRGPEQVKEVTDMIETQR 513


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/465 (23%), Positives = 223/465 (47%), Gaps = 42/465 (9%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P ++TY T +  L +   F     LI  + +     ++  FNA+I    + G +DEA
Sbjct: 240 GETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEA 299

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            ++F++MK+SG  P   +Y+ LI G+   G+ +++ ++ + M ++  + PN  +Y+IL+ 
Sbjct: 300 SEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEM-RNSGILPNIYSYSILID 358

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +C +  +++A  V  +M  SGI PD  +Y+ L   + + G+   A +   EM +N   P
Sbjct: 359 GFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSP 418

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +      ++ GY K     +A++    M++L + P+ +  N ++  +    D    +KAL
Sbjct: 419 SAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPD---FNKAL 475

Query: 264 TLMEEF--------------------------------------GVKPDVVTFSTIMDAW 285
            L E+F                                       V PDVV +ST++  +
Sbjct: 476 ALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCF 535

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
           +      K   +F  M K GI  ++  ++IL   ++   +   A  +   M++  V+P+ 
Sbjct: 536 AKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQ 595

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
           + +T++++G+CN  +M RA +++++M   G +PN+ TY   +  Y +  +  +A +L + 
Sbjct: 596 IAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEK 655

Query: 406 MEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           M+E+GV P +    ++  ++   G    A+ +    +++ +  PN
Sbjct: 656 MKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPN 700



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 98/420 (23%), Positives = 208/420 (49%), Gaps = 2/420 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG+  +A  +F  +   G  P + +Y+ L+    ++ R    L +  +++  G+ PD   
Sbjct: 328 KGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYS 387

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ +I+     G++D A+K +++M  +   P+   Y +LIKGY    +   +LK  ++M 
Sbjct: 388 YSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIM- 446

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           Q   + P+    N ++  +C K    +A  +  K   +G+  +  +YN       +    
Sbjct: 447 QKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVP 506

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A Q+L  M    V P+      ++S + K  N E A+    +M ++ +  N+  +  L
Sbjct: 507 EKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTIL 566

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I  F+     D   +    M+E  V PD + +++++  + + G M + + +FD+M + G 
Sbjct: 567 INLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGC 626

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P++  ++     Y++  +  +A  +   M++ GV+P+ +++T +I+ +CN  +M RA +
Sbjct: 627 SPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEA 686

Query: 367 IYEKMCEIG-INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           ++++M + G   PN+  Y  L+  Y +  +  +AE+L + M  KG+    S+   V++SW
Sbjct: 687 LFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSVSESW 746



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 199/419 (47%), Gaps = 5/419 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTR----QKRFKSILSLISKVE 56
           +  LV   +      +F  LI+ G RP + TYT ++    R        +    ++ K+ 
Sbjct: 178 LKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIY 237

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
             G  P+ + +   I    + G    A ++ Q +           +N +I G    G  +
Sbjct: 238 MSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILD 297

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           E+ ++ + M ++  + P+  +Y+IL+  +C K  +++A  V  +M  SGI P+  +Y+ L
Sbjct: 298 EASEVFKEM-KNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSIL 356

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
              + + G   +A ++  EM+N+ + P+  +  I++ G+C++G+M+ A++F   M     
Sbjct: 357 IDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNF 416

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P+   + SLIKG+   K      K   +M++ G+ PD +  + I+  +       K   
Sbjct: 417 SPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALA 476

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           + +   + G+  + + ++       R   P+KA  +L  M K  V P+VV ++T+IS + 
Sbjct: 477 LSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFA 536

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
             +  ++A+ ++ KM ++GI  N+KTY  L+  +    +   A  L + M+E  V P +
Sbjct: 537 KRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQ 595



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/407 (24%), Positives = 190/407 (46%), Gaps = 1/407 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA  +F  +   G  P + +Y+ L+    R+ R      +  ++   G+ P+
Sbjct: 290 LCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPN 349

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              ++ +I+   + G VD+A+++F++MK+SG  P   +Y+ LI G+   G  + ++K  +
Sbjct: 350 IYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWE 409

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M+ + N  P+   Y  L++ +        A      M   G+ PD +  N +   Y + 
Sbjct: 410 EMTSN-NFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRK 468

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +  +A  +  + Q N V  N  +    +   C+    E A++ L  M +  V P++V +
Sbjct: 469 PDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNY 528

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           ++LI  F    +S+        M + G+  +V T++ +++ + S   M     +F  M +
Sbjct: 529 STLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKE 588

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
           + + PD   ++ L  G+   GE  +A ++   M + G  PNVV +T  I+ +    K  +
Sbjct: 589 SRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQ 648

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           A  +YEKM E G+ P+   Y  L+  +    +  RAE L   M+++G
Sbjct: 649 AHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEG 695



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/331 (24%), Positives = 160/331 (48%), Gaps = 2/331 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P+   Y +L+    + K+F + L     ++K GM PD+I  N +++      + ++A+ +
Sbjct: 418 PSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALAL 477

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            +K +++G      +YN  I        PE++L+LL +M + +NV P+   Y+ L+  + 
Sbjct: 478 SEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLK-RNVLPDVVNYSTLISCFA 536

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            + + E+A  +  KM   GI  +  TY  L   +    +   A ++   M+ ++V P++ 
Sbjct: 537 KRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQI 596

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               +V+G+C  G M  A      M      PN+V +   I  +L +  ++   K    M
Sbjct: 597 AYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKM 656

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG-IEPDIHVFSILAKGYVRAGE 325
           +E GV PD + ++ ++ A+ + G M + + +FD+M + G   P++ +++ L   Y++  +
Sbjct: 657 KERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNK 716

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
             +AE +   MR  G+        +V   WC
Sbjct: 717 RDQAEKLYEEMRAKGLSRLCSSEGSVSESWC 747



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 97/409 (23%), Positives = 179/409 (43%), Gaps = 46/409 (11%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD----SILF 67
            A+Y+F    ++G    +++   L+  L    R   +  L   + K G +P+    +I+ 
Sbjct: 154 HANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMM 213

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N        S ++  A +I  K+  SG  P   TY T IKG   VG    + +L+Q + +
Sbjct: 214 NFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCR 273

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            KN   N+  +N ++   C    ++EA                              E +
Sbjct: 274 -KNQPLNNHCFNAVIYGLCQGGILDEA-----------------------------SEVF 303

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +      EM+N+ + P+  +  I++ G+C++G ++ A      M+   + PN+  ++ LI
Sbjct: 304 K------EMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILI 357

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            GF        VDKAL + EE    G+ PDV ++S ++D +   G M    + +++M   
Sbjct: 358 DGFC---KEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSN 414

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
              P    +  L KGY ++ +   A      M+K G+ P+ +    ++S +C      +A
Sbjct: 415 NFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKA 474

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           +++ EK  E G++ N  +Y   +        P +A +LL VM ++ V P
Sbjct: 475 LALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLP 523



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 75/166 (45%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+ +   K   A+ +F  + E    P  I YT+LVA            +L  ++ ++G 
Sbjct: 567 INLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGC 626

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +   IN   +    ++A K+++KMK+ G  P    Y  LI  + N G+   +  
Sbjct: 627 SPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEA 686

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGI 166
           L   M Q+    PN   Y  L+ ++   N  ++A  +  +M A G+
Sbjct: 687 LFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGL 732



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 9/223 (4%)

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
           L+V  + VVF+ LIK F      +  +      ++ G++ ++++ + ++        +  
Sbjct: 130 LDVEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDG 189

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVR----AGEPQKAESILTSMRKYGVHPNVVMFT 349
            + +F+ ++K G  P+IH ++I+   + R    + + ++A  IL  +   G  PNVV + 
Sbjct: 190 VRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYG 249

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
           T I G C       A  + + +C      N   +  +++G  +      A E+ + M+  
Sbjct: 250 TYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNS 309

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS--MPN 450
           G+ P   +  ++ D +   G   +A  V K   E R S  +PN
Sbjct: 310 GILPDVYSYSILIDGFCRKGRVDQASEVFK---EMRNSGILPN 349


>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
          Length = 625

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 187/389 (48%), Gaps = 1/389 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L+E    PT  TY  L+ A       +   ++ +++ K G  P ++++NA I+   + G+
Sbjct: 232 LLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGD 291

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             +A++IF++MK   C+P+T+TY  LI  YG   K   +LK+   M   K  KPN  T+ 
Sbjct: 292 TQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQK-CKPNICTFT 350

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            LV A+  +   E+A  +  ++  +G++PD   YN L  AY++ G  Y A ++   MQ+ 
Sbjct: 351 ALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM 410

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+  +  I+V  Y + G  EDA      MK L + P +     L+  +         
Sbjct: 411 GCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKC 470

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
           ++ +  M + G+KPD    +++++ +   G   K +E+   M K     DI  ++IL   
Sbjct: 471 EEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINI 530

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y RAG   + E +  S+    + P+VV +T+ I  +    +  R + ++E+M + G  P+
Sbjct: 531 YGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPD 590

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEE 408
             T + LL       Q      +++ M +
Sbjct: 591 GGTAKVLLSACSNGDQIQEVTTVIRTMHK 619



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 169/350 (48%), Gaps = 5/350 (1%)

Query: 93  SGCKPTTSTYNTLIKGYG--NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
           S   P    YN LI  YG  ++ K  ES  L  L   +    P + TY +L++A+C+   
Sbjct: 200 SSFHPDVICYNLLIDAYGQKSLYKKAESTYLELL---EARCVPTEDTYALLLKAYCTSGL 256

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           +E+A  V  +M   G  P AV YN       + G+T +A ++   M+ ++ +P+  T  +
Sbjct: 257 LEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTM 316

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           +++ Y K      A++  + M+  +  PN+  F +L+  F      +  ++    ++E G
Sbjct: 317 LINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAG 376

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           ++PDV  ++ +M+A+S AG      EIF  M   G EPD   ++I+   Y RAG  + A+
Sbjct: 377 LEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQ 436

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           ++   M++ G+ P +     ++S +  A K+ +   I  +M + GI P+     ++L  Y
Sbjct: 437 AVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLY 496

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
           G   Q  + EE+L  ME+       ST  ++ + +   G     + + +S
Sbjct: 497 GRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRS 546



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 171/358 (47%), Gaps = 3/358 (0%)

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           +    PD I +N +I+A  +     +A   + ++ ++ C PT  TY  L+K Y   G  E
Sbjct: 199 RSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLE 258

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           ++  +   M +     P+   YN  +         ++A  +  +M     QP   TY  L
Sbjct: 259 KAEAVFAEMRK-YGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTML 317

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
              Y +  ++Y A ++  EM++ + +PN  T   +V+ + +EG  E A     +++E  +
Sbjct: 318 INLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGL 377

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P++  +N+L++ +       G  +  +LM+  G +PD  +++ ++DA+  AGL    Q 
Sbjct: 378 EPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQA 437

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F+ M + GI P +    +L   Y RAG+  K E I+  M K G+ P+  +  ++++ + 
Sbjct: 438 VFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYG 497

Query: 357 NAVKMQRAMSIYEKMCEIGINP-NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
              + ++   +   M E G  P ++ TY  L+  YG A    R EEL + +  + + P
Sbjct: 498 RLGQFEKMEEVLTAM-EKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIP 554



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 153/311 (49%)

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+   YN+L+ A+  K+  ++A +   +++ +   P   TY  L +AY   G   +AE +
Sbjct: 204 PDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAV 263

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             EM+     P+       + G  K G+ + A+    RMK     P+   +  LI  +  
Sbjct: 264 FAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGK 323

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
              S    K    M     KP++ TF+ +++A++  GL  K +EIF+ + +AG+EPD++ 
Sbjct: 324 ASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYA 383

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++ L + Y RAG P  A  I + M+  G  P+   +  ++  +  A   + A +++E M 
Sbjct: 384 YNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMK 443

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
            +GI P +K++  LL  Y  A +  + EE++  M + G++P    +  + + +  +G   
Sbjct: 444 RLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFE 503

Query: 433 EAKRVLKSAEE 443
           + + VL + E+
Sbjct: 504 KMEEVLTAMEK 514



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 162/335 (48%), Gaps = 1/335 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+  G   +A  IF  +  +  +P+  TYT L+    +  +    L +  ++     KP+
Sbjct: 286 LMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPN 345

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              F A++NA +  G  ++A +IF++++++G +P    YN L++ Y   G P  + ++  
Sbjct: 346 ICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFS 405

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           LM Q    +P+  +YNI+V A+      E+A  V   M   GI P   ++  L  AY++ 
Sbjct: 406 LM-QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRA 464

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+  + E+++ +M  + ++P+      +++ Y + G  E     L  M++     ++  +
Sbjct: 465 GKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTY 524

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N LI  +        +++    +    + PDVVT+++ + A+S      +C E+F++M+ 
Sbjct: 525 NILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMID 584

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           AG  PD     +L        + Q+  +++ +M K
Sbjct: 585 AGCYPDGGTAKVLLSACSNGDQIQEVTTVIRTMHK 619



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/364 (19%), Positives = 166/364 (45%), Gaps = 1/364 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  +F  + + G  P+ + Y   +  L +    +  + +  ++++D  +P +  +
Sbjct: 255 GLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATY 314

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +IN   ++     A+K+F +M+   CKP   T+  L+  +   G  E++ ++ + + Q
Sbjct: 315 TMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQL-Q 373

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  ++P+   YN L+ A+        A  +   M   G +PD  +YN +  AY + G   
Sbjct: 374 EAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHE 433

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A+ +   M+   + P  ++  +++S Y + G +      + +M +  + P+  V NS++
Sbjct: 434 DAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSML 493

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             +  +   + +++ LT ME+     D+ T++ +++ +  AG   + +E+F  +    + 
Sbjct: 494 NLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLI 553

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+  ++     Y R  +  +   +   M   G +P+      ++S   N  ++Q   ++
Sbjct: 554 PDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQEVTTV 613

Query: 368 YEKM 371
              M
Sbjct: 614 IRTM 617


>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
          Length = 1443

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 197/392 (50%), Gaps = 7/392 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKS--ILSLISKVEKD 58
           M +    G+  +A  + + + ++   P L+++ TL+ A  +     +   L L+ +V + 
Sbjct: 228 MGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQA 287

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G++PD+I +N +I+ACS+  N+D+A+ +F++M  S C+P   TYN ++  +G  GK +E+
Sbjct: 288 GLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEA 347

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
             + + + + K  +P+  TYN L+ A+  +  +E    V  ++V +G + D +TYNT+  
Sbjct: 348 ELMFKELVE-KGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIH 406

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            Y + G    A  +  EM+     P+  T  ++V    K   + +A + L  M +  + P
Sbjct: 407 MYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKP 466

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
            LV F++LI  +      D  ++    M E GVKPD + +  ++D ++ +    K   ++
Sbjct: 467 TLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLY 526

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
             M+K G +PD  ++ +L     +  E  + E ++  M        +V+ + +I   C  
Sbjct: 527 RAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKAEC-- 584

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
             + +  S+ ++ C  G  P+ K+  ++L  Y
Sbjct: 585 --ISQGASLLKRACLQGYEPDGKSLLSILDAY 614



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 171/347 (49%), Gaps = 9/347 (2%)

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVG--KPEESLKLLQ 123
           +FNAM+   + SG  D+A ++   M+D   +P   ++NTLI      G      +L+LL 
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLH 282

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            + Q   ++P+  TYN L+ A    +++++A  V  +M+AS  +PD  TYN +   + + 
Sbjct: 283 EVRQ-AGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRC 341

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   AE M  E+     +P+  T   ++  + KEG++E   R    + +     + + +
Sbjct: 342 GKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITY 401

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N++I  +  +     +D AL L +E    G  PD VT++ ++D+      + +  ++ ++
Sbjct: 402 NTMIHMYGKMGR---LDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEE 458

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M  AG++P +  FS L   Y ++G    AE     M + GV P+ + +  ++  +  + +
Sbjct: 459 MADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDE 518

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
            ++ M +Y  M + G  P+   Y+ LL    +  +    E ++Q ME
Sbjct: 519 TRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDME 565



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/449 (21%), Positives = 203/449 (45%), Gaps = 9/449 (2%)

Query: 32   YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
            Y  L+  L   + F     +   ++  G+ P   +F + I  C   G  + A   +Q M 
Sbjct: 680  YEYLITYLEEAELFPEACQVFCDMQFLGIVPSQKVFPSFIFQCCRLGFPETA---YQLMD 736

Query: 92   DSGCKPTT----STYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
            D+     +    S    +I+ YG +   +++   ++ + Q+  V  + R +N L+ A+  
Sbjct: 737  DAARSDISLNILSCRVAMIEAYGKLKLWQQAENFVKGLKQESGV--DRRIWNALIHAYAE 794

Query: 148  KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
                E A  +   M+  G  P   + N + RA    G       ++ E+Q+  ++ ++ T
Sbjct: 795  SGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKST 854

Query: 208  CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
              +++  + K G++ + M+    MK     PN+ ++  +I      K    V+  +  ME
Sbjct: 855  VLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEME 914

Query: 268  EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
              G KPD+V  +T++  ++  G   +  E++  +++AG+EPD   ++ L   Y R   P+
Sbjct: 915  GAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPE 974

Query: 328  KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            +  ++L  M K G+ P +  +  +++    A   ++A  ++E+M   G   N   Y  ++
Sbjct: 975  EGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMM 1034

Query: 388  WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS 447
              Y  A+   +AE LL  M+E G+ P  +T+ ++  S+   G   EA++VL S +     
Sbjct: 1035 KIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLE 1094

Query: 448  MPNKKDEIAVESIHRKQNLSASNSTFLQI 476
            +        +++  R ++ S   +  L++
Sbjct: 1095 ISTLPYSTVLDAYLRNRDYSLGITKLLEM 1123



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 164/341 (48%), Gaps = 5/341 (1%)

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A  +F +    G   T   +N ++  Y   G+ +++ +LL  M +D++++P+  ++N L+
Sbjct: 207 AEDVFLRFAREGA--TVQVFNAMMGVYARSGRFDDARQLLDAM-RDQDIEPDLVSFNTLI 263

Query: 143 RAWCSKNSIEE--AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
            A      +    A  +++++  +G++PDA+TYNTL  A +Q      A  +  EM  ++
Sbjct: 264 NARAKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASE 323

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
            RP+  T   +VS + + G  ++A      + E    P+ V +NSL+  F    D + V+
Sbjct: 324 CRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVE 383

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           +    + + G + D +T++T++  +   G +     ++D+M   G  PD   +++L    
Sbjct: 384 RVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSL 443

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            +     +A  +L  M   G+ P +V F+ +I  +  + +   A   +++M E G+ P+ 
Sbjct: 444 GKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDR 503

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             Y  +L  +  + +  +   L + M + G +P     Q++
Sbjct: 504 LAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVL 544



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 148/287 (51%), Gaps = 15/287 (5%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA  +F  L+E+G +P  +TY +L+ A  ++   + +  +  ++ K G + D I +
Sbjct: 342 GKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITY 401

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N MI+   + G +D A+ ++ +M+  GC P   TY  L+   G + +  E+ K+L+ M+ 
Sbjct: 402 NTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMA- 460

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D  +KP   T++ L+ A+      ++A     +MV SG++PD + Y  +   +A+  ET 
Sbjct: 461 DAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETR 520

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE--LEVHPNLVVFNS 245
           +   +   M  +  +P++    ++++   K GN  D +  + +  E   E++P LV+ + 
Sbjct: 521 KLMVLYRAMIKDGYKPDDGLYQVLLAALAK-GNEHDEIEGVIQDMEAVFEMNP-LVISSI 578

Query: 246 LIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAG 289
           LIK       ++ + +  +L++     G +PD  +  +I+DA+   G
Sbjct: 579 LIK-------AECISQGASLLKRACLQGYEPDGKSLLSILDAYEKMG 618



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 143/280 (51%), Gaps = 3/280 (1%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            G   E   I+N +   G+ P +  Y  +++ L   KRF+ +  +++++E  G KPD ++ 
Sbjct: 866  GDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVL 925

Query: 68   NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            N ++   + +GN D  ++++  + ++G +P   TYNTLI  Y    +PEE   LL  M +
Sbjct: 926  NTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGK 985

Query: 128  DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
             + + P   +Y IL+ A       E+A  +  +M   G + +   Y+ + + Y       
Sbjct: 986  -RGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHS 1044

Query: 188  RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            +AE +L  M+ + + P   T  I+++ Y   G+ ++A + L  +K   +  + + +++++
Sbjct: 1045 KAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVL 1104

Query: 248  KGFLDIKD-SDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
              +L  +D S G+ K L  M+  GV+PD   +++ + A S
Sbjct: 1105 DAYLRNRDYSLGITKLLE-MKRDGVEPDHQVWTSFIRAAS 1143



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/373 (20%), Positives = 171/373 (45%), Gaps = 7/373 (1%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            G    A  IF+ +I++G  PT+ +   ++ AL    R   +  ++ +++   +K      
Sbjct: 796  GLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTV 855

Query: 68   NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
              M+ A +++G+V E MKI+  MK +G  P    Y  +I    +  K    ++L+    +
Sbjct: 856  LLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCH-NKRFRDVELMVAEME 914

Query: 128  DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                KP+    N L+  +    + +    V + ++ +G++PD  TYNTL      Y   +
Sbjct: 915  GAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTL---IVMYSRNF 971

Query: 188  RAEQ---MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
            R E+   +L+EM    + P   +  I+++   K    E A      M+      N  +++
Sbjct: 972  RPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYH 1031

Query: 245  SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
             ++K + + ++    +  L+ M+E G++P + T   +M ++ ++G   + +++ + +  +
Sbjct: 1032 MMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSS 1091

Query: 305  GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
             +E     +S +   Y+R  +     + L  M++ GV P+  ++T+ I       +   A
Sbjct: 1092 NLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDA 1151

Query: 365  MSIYEKMCEIGIN 377
            + + + + + G +
Sbjct: 1152 ILLLKSLQDCGFD 1164



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/379 (21%), Positives = 157/379 (41%), Gaps = 1/379 (0%)

Query: 32   YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
            +  L+ A      ++   ++   + K G  P     N M+ A    G +DE   + Q+++
Sbjct: 785  WNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQ 844

Query: 92   DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
            D   K + ST   +++ +   G   E +K+   M +     PN   Y I++   C     
Sbjct: 845  DLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGM-KAAGYLPNMHLYRIMISLLCHNKRF 903

Query: 152  EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
             +   +V +M  +G +PD V  NTL   Y   G   R  ++   +    + P+E T   +
Sbjct: 904  RDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTL 963

Query: 212  VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
            +  Y +    E+    LY M +  + P L  +  L+      K  +  D     M   G 
Sbjct: 964  IVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGY 1023

Query: 272  KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            + +   +  +M  + +A    K + +   M + GIEP I    IL   Y  +G P +AE 
Sbjct: 1024 RLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEK 1083

Query: 332  ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
            +L S++   +  + + ++TV+  +         ++   +M   G+ P+ + + + +    
Sbjct: 1084 VLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRAAS 1143

Query: 392  EAKQPWRAEELLQVMEEKG 410
              +Q   A  LL+ +++ G
Sbjct: 1144 LCEQTDDAILLLKSLQDCG 1162



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 113/230 (49%), Gaps = 5/230 (2%)

Query: 6    GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
            G G       +++ ++E G  P   TY TL+   +R  R +   +L+ ++ K G+ P   
Sbjct: 934  GTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLE 993

Query: 66   LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
             +  ++ A  ++   ++A  +F++M+  G +   S Y+ ++K Y N     ++  LL  M
Sbjct: 994  SYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAM 1053

Query: 126  SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
             +D  ++P   T +IL+ ++ +    +EA  V+  + +S ++   + Y+T+  AY +  +
Sbjct: 1054 KED-GIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRD 1112

Query: 186  TYRAEQMLFEMQNNQVRPNER--TCGIIVSGYCKEGNMEDAMRFLYRMKE 233
                   L EM+ + V P+ +  T  I  +  C++   +DA+  L  +++
Sbjct: 1113 YSLGITKLLEMKRDGVEPDHQVWTSFIRAASLCEQ--TDDAILLLKSLQD 1160


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 195/411 (47%), Gaps = 8/411 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +I EGH P   T+  L+  L R   F     + +++ K  +  D+  F  MI  C E+G 
Sbjct: 115 MIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNEL-KSKVVLDAYSFGIMIKGCCEAGY 173

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             +  ++   +++ G  P    Y TLI G    G    +  L   M++   V PN  TY+
Sbjct: 174 FVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLV-PNPHTYS 232

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           +L+  +  +    E + +   M  SGI P+A  YN L   Y   G   +A ++  EM+  
Sbjct: 233 VLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREK 292

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            +     T  I++ G C+     +A++ ++++ ++ + PN+V +N LI GF D++  D  
Sbjct: 293 GIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSA 352

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            +    ++  G+ P +VT++T++  +S    +    ++  +M +  I P    ++IL   
Sbjct: 353 VRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDA 412

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           + R    +KA  + + M K G+ P+V  ++ ++ G C    M+ A  +++ + E+ + PN
Sbjct: 413 FARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPN 472

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
              Y T++ GY +    +RA  LL  M + G+ P       VA     IGL
Sbjct: 473 SVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPN------VASFCSTIGL 517



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 192/401 (47%), Gaps = 38/401 (9%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E G  P ++ YTTL+    +        +L  K+ + G+ P+   ++ ++N   + G   
Sbjct: 186 EFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQR 245

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           E  ++++ MK SG  P    YN LI  Y N G  +++ K+   M ++K +     TYNIL
Sbjct: 246 EGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEM-REKGIACGVMTYNIL 304

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +   C      EA  +V+K+   G+ P+ VTYN                           
Sbjct: 305 IGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYN--------------------------- 337

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
                   I+++G+C    M+ A+R   ++K   + P LV +N+LI G+  +++  G   
Sbjct: 338 --------ILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALD 389

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            +  MEE  + P  VT++ ++DA++      K  E+   M K+G+ PD++ +S+L  G  
Sbjct: 390 LVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLC 449

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
             G  ++A  +  S+ +  + PN V++ T+I G+C      RA+ +  +M + G+ PN+ 
Sbjct: 450 VHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVA 509

Query: 382 TYETLLWGYGEAKQPWR-AEELLQVMEEKGVRPKKSTIQLV 421
           ++ + + G     + W+ AE LL  M   G++P  S  ++V
Sbjct: 510 SFCSTI-GLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 110/529 (20%), Positives = 223/529 (42%), Gaps = 11/529 (2%)

Query: 7   KGKPHEAH---YIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           +G  H +H   +I N L+  G  P      +L+  L   +   S++  +++         
Sbjct: 32  QGLQHTSHSISFILNHLLSSGMLPQA---QSLILRLISGRIPSSLMLQLTQAHFTPCSTY 88

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           + L++ ++NA   S + D+A+     M   G  P ++T+N L+         +++  +  
Sbjct: 89  TPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFN 148

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            +     V  +  ++ I+++  C      + + ++  +   G+ P+ V Y TL     + 
Sbjct: 149 ELKSK--VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKD 206

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A+ +  +M    + PN  T  ++++G+ K+G   +  +    MK   + PN   +
Sbjct: 207 GNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAY 266

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N LI  + +    D   K    M E G+   V+T++ ++         G+  ++   + K
Sbjct: 267 NCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNK 326

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ P+I  ++IL  G+    +   A  +   ++  G+ P +V + T+I+G+     +  
Sbjct: 327 VGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAG 386

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+ + ++M E  I P+  TY  L+  +       +A E+  +ME+ G+ P   T  ++  
Sbjct: 387 ALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLH 446

Query: 424 SWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSE 483
                G  +EA ++ KS  E     PN    I    IH      +S      +  +V S 
Sbjct: 447 GLCVHGNMKEASKLFKSLGE-MHLQPN--SVIYNTMIHGYCKEGSSYRALRLLNEMVQSG 503

Query: 484 HNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQPMVVCRKQCSQV 532
              + A+   +  +L  D  W   + L      SG++P V   K   +V
Sbjct: 504 MVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKV 552



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 49/109 (44%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA  +F  L E   +P  + Y T++    ++      L L++++ + GM P+
Sbjct: 448 LCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPN 507

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNV 112
              F + I          EA  +  +M +SG KP+ S Y  + K  G+V
Sbjct: 508 VASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKVKGDV 556


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/445 (23%), Positives = 201/445 (45%), Gaps = 9/445 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+LV  G+  +A  +F    EE   P   TY +L+  L +  +      L+ ++   G+
Sbjct: 5   LNLLVRAGQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P   + N +I    ++G   +A+  F+ +  + C P   T+N L+      G+ EE+ +
Sbjct: 62  PPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M       PN  TY  ++   C    ++ A  ++  M  +G  P+ +TY+ L    
Sbjct: 122 IFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGL 181

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G T +   +L EM     +P+      +++G CK   +++A+  +  M     +P +
Sbjct: 182 CKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTV 241

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +NSL++ F   K  D   + + +M E G  PDV+ ++T++        +   Q +   
Sbjct: 242 VTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQ 301

Query: 301 MVKAGIEPDIHVFSILAKGYV---RAGEPQKAES---ILTSMRKYGVHPNVVMFTTVISG 354
           MV A   PD+  +S +  G     R     K E+   IL  M++ G  PN   +  VI G
Sbjct: 302 MVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEG 361

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C A K Q+A+++  +M +  + P+L ++  ++    ++     A ++  +M E+  +P 
Sbjct: 362 LCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPN 421

Query: 415 KSTIQLVADSWRAIGLAREAKRVLK 439
                 + D     G   +A RV +
Sbjct: 422 PVAYAALIDGLSKGGEVDKAVRVFE 446



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 194/394 (49%), Gaps = 10/394 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK   A  + + + E G  P +ITY+ LV  L +  R     +L+ ++ + G 
Sbjct: 143 INGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGF 202

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD I++N ++N   +S  +DEA+++ Q M  SGC PT  TYN+L++ +    + + + +
Sbjct: 203 QPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFR 262

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA--- 177
           L+Q+MS+ +   P+   YN ++   C    +++A  ++ +MVA+   PD +TY+T+    
Sbjct: 263 LIQVMSE-RGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGL 321

Query: 178 ----RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
               R  A + +   A ++L  M+     PN  T  +++ G C+    + A+  L RM +
Sbjct: 322 CKDWRVDADW-KLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMID 380

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
            EV P+L  F+ +I       D D   K   +M E   KP+ V ++ ++D  S  G + K
Sbjct: 381 SEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDK 440

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
              +F+ MV++   P +  ++ +  G    G  ++A  ++  M      P+   +  +I 
Sbjct: 441 AVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIR 499

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           G C    ++ A  +++ +   G    +  Y  L+
Sbjct: 500 GLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLV 533



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 142/311 (45%), Gaps = 8/311 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M +     +   A  +   + E G  P +I Y T++A L R  R     +L+ ++     
Sbjct: 248 MELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARC 307

Query: 61  KPDSILFNAMINACSESGNVDE------AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK 114
            PD I ++ +I+   +   VD       A +I + MK +GC P   TY  +I+G     K
Sbjct: 308 VPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARK 367

Query: 115 PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYN 174
            +++L LL+ M  D  V P+  ++++++ + C  + ++ A+ +   M     +P+ V Y 
Sbjct: 368 SQQALALLRRMI-DSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYA 426

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
            L    ++ GE  +A + +FE+     RP   T   ++ G C  G +E+A+R +  M   
Sbjct: 427 ALIDGLSKGGEVDKAVR-VFELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHK 485

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
           E  P+   + +LI+G   +   +   +    +E  G   +V  ++ +++       +   
Sbjct: 486 ECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDA 545

Query: 295 QEIFDDMVKAG 305
             + + +++AG
Sbjct: 546 HGVANKLIEAG 556


>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Vitis vinifera]
          Length = 587

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 181/368 (49%), Gaps = 1/368 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L+E    PT  TY  L+ A       +   ++ +++ K G  P ++++NA I+   + G+
Sbjct: 194 LLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGD 253

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             +A++IF++MK   C+P+T+TY  LI  YG   K   +LK+   M   K  KPN  T+ 
Sbjct: 254 TQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQK-CKPNICTFT 312

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            LV A+  +   E+A  +  ++  +G++PD   YN L  AY++ G  Y A ++   MQ+ 
Sbjct: 313 ALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM 372

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+  +  I+V  Y + G  EDA      MK L + P +     L+  +         
Sbjct: 373 GCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKC 432

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
           ++ +  M + G+KPD    +++++ +   G   K +E+   M K     DI  ++IL   
Sbjct: 433 EEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINI 492

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y RAG   + E +  S+    + P+VV +T+ I  +    +  R + ++E+M + G  P+
Sbjct: 493 YGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPD 552

Query: 380 LKTYETLL 387
             T + LL
Sbjct: 553 GGTAKVLL 560



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 171/351 (48%), Gaps = 7/351 (1%)

Query: 93  SGCKPTTSTYNTLIKGYG--NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
           S   P    YN LI  YG  ++ K  ES  L  L   +    P + TY +L++A+C+   
Sbjct: 162 SSFHPDVICYNLLIDAYGQKSLYKKAESTYLELL---EARCVPTEDTYALLLKAYCTSGL 218

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           +E+A  V  +M   G  P AV YN       + G+T +A ++   M+ ++ +P+  T  +
Sbjct: 219 LEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTM 278

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           +++ Y K      A++  + M+  +  PN+  F +L+  F      +  ++    ++E G
Sbjct: 279 LINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAG 338

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           ++PDV  ++ +M+A+S AG      EIF  M   G EPD   ++I+   Y RAG  + A+
Sbjct: 339 LEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQ 398

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           ++   M++ G+ P +     ++S +  A K+ +   I  +M + GI P+     ++L  Y
Sbjct: 399 AVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLY 458

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKK-STIQLVADSWRAIGLAREAKRVLKS 440
           G   Q  + EE+L  M EKG  P   ST  ++ + +   G     + + +S
Sbjct: 459 GRLGQFEKMEEVLTAM-EKGPYPADISTYNILINIYGRAGFFARMEELFRS 508



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 171/358 (47%), Gaps = 3/358 (0%)

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           +    PD I +N +I+A  +     +A   + ++ ++ C PT  TY  L+K Y   G  E
Sbjct: 161 RSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLE 220

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           ++  +   M +     P+   YN  +         ++A  +  +M     QP   TY  L
Sbjct: 221 KAEAVFAEMRK-YGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTML 279

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
              Y +  ++Y A ++  EM++ + +PN  T   +V+ + +EG  E A     +++E  +
Sbjct: 280 INLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGL 339

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P++  +N+L++ +       G  +  +LM+  G +PD  +++ ++DA+  AGL    Q 
Sbjct: 340 EPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQA 399

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F+ M + GI P +    +L   Y RAG+  K E I+  M K G+ P+  +  ++++ + 
Sbjct: 400 VFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYG 459

Query: 357 NAVKMQRAMSIYEKMCEIGINP-NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
              + ++   +   M E G  P ++ TY  L+  YG A    R EEL + +  + + P
Sbjct: 460 RLGQFEKMEEVLTAM-EKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIP 516



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 153/311 (49%)

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+   YN+L+ A+  K+  ++A +   +++ +   P   TY  L +AY   G   +AE +
Sbjct: 166 PDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAV 225

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             EM+     P+       + G  K G+ + A+    RMK     P+   +  LI  +  
Sbjct: 226 FAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGK 285

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
              S    K    M     KP++ TF+ +++A++  GL  K +EIF+ + +AG+EPD++ 
Sbjct: 286 ASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYA 345

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++ L + Y RAG P  A  I + M+  G  P+   +  ++  +  A   + A +++E M 
Sbjct: 346 YNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMK 405

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
            +GI P +K++  LL  Y  A +  + EE++  M + G++P    +  + + +  +G   
Sbjct: 406 RLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFE 465

Query: 433 EAKRVLKSAEE 443
           + + VL + E+
Sbjct: 466 KMEEVLTAMEK 476



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 162/335 (48%), Gaps = 1/335 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+  G   +A  IF  +  +  +P+  TYT L+    +  +    L +  ++     KP+
Sbjct: 248 LMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPN 307

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              F A++NA +  G  ++A +IF++++++G +P    YN L++ Y   G P  + ++  
Sbjct: 308 ICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFS 367

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           LM Q    +P+  +YNI+V A+      E+A  V   M   GI P   ++  L  AY++ 
Sbjct: 368 LM-QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRA 426

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+  + E+++ +M  + ++P+      +++ Y + G  E     L  M++     ++  +
Sbjct: 427 GKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTY 486

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N LI  +        +++    +    + PDVVT+++ + A+S      +C E+F++M+ 
Sbjct: 487 NILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMID 546

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           AG  PD     +L        + Q+  +++ +M K
Sbjct: 547 AGCYPDGGTAKVLLSACSNGDQIQEVTTVIRTMHK 581



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/364 (19%), Positives = 166/364 (45%), Gaps = 1/364 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  +F  + + G  P+ + Y   +  L +    +  + +  ++++D  +P +  +
Sbjct: 217 GLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATY 276

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +IN   ++     A+K+F +M+   CKP   T+  L+  +   G  E++ ++ + + Q
Sbjct: 277 TMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQL-Q 335

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  ++P+   YN L+ A+        A  +   M   G +PD  +YN +  AY + G   
Sbjct: 336 EAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHE 395

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A+ +   M+   + P  ++  +++S Y + G +      + +M +  + P+  V NS++
Sbjct: 396 DAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSML 455

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             +  +   + +++ LT ME+     D+ T++ +++ +  AG   + +E+F  +    + 
Sbjct: 456 NLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLI 515

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD+  ++     Y R  +  +   +   M   G +P+      ++S   N  ++Q   ++
Sbjct: 516 PDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQEVTTV 575

Query: 368 YEKM 371
              M
Sbjct: 576 IRTM 579


>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
 gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
          Length = 1283

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 203/406 (50%), Gaps = 7/406 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKS--ILSLISKVEKD 58
           M +    G+  +A  + + + ++   P L+++ TL+ A  +     +   L L+ +V + 
Sbjct: 68  MGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQA 127

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G++PD+I +N +I+ACS+  N+D+A+ +F++M  S C+P   TYN ++  +G  GK +E+
Sbjct: 128 GLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEA 187

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
             + + + + K  +P+  TYN L+ A+  +  +E    V  ++V +G + D +TYNT+  
Sbjct: 188 ELMFKELVE-KGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIH 246

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            Y + G    A  +  EM+     P+  T  ++V    K   + +A + L  M +  + P
Sbjct: 247 MYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKP 306

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
            LV F++LI  +      D  ++    M E GVKPD + +  ++D ++ +    K   ++
Sbjct: 307 TLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLY 366

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
             M+K G +PD  ++ +L     +  E  + E ++  M        +V+ + +I   C  
Sbjct: 367 RAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKAEC-- 424

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
             + +  S+ ++ C  G  P+ K+  ++L  Y +  +  +   LL+
Sbjct: 425 --ISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLE 468



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/449 (21%), Positives = 204/449 (45%), Gaps = 9/449 (2%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           Y  L+  L   + F     +   ++  G+ P   ++ ++I  C   G  + A   +Q M 
Sbjct: 520 YEYLITYLEEAELFPEACQVFCDMQFLGIVPSQKIYQSIIYTCCRLGFPETA---YQLMD 576

Query: 92  DSGCKPTT----STYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
           D+     +    S    +I+ YG +   +++   ++ + Q+  V  + R +N L+ A+  
Sbjct: 577 DAARSDISLNILSCRVAMIEAYGKLKLWQQAENFVKGLKQESGV--DRRIWNALIHAYAE 634

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
               E A  +   M+  G  P   + N + RA    G       ++ E+Q+  ++ ++ T
Sbjct: 635 SGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKST 694

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
             +++  + K G++ + M+    MK     PN+ ++  +I      K    V+  +  ME
Sbjct: 695 VLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEME 754

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
             G KPD+V  +T++  ++  G   +  E++  +++AG+EPD   ++ L   Y R   P+
Sbjct: 755 GAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPE 814

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           +  ++L  M K G+ P +  +  +++    A   ++A  ++E+M   G   N   Y  ++
Sbjct: 815 EGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMM 874

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS 447
             Y  A+   +AE LL  M+E G+ P  +T+ ++  S+   G   EA++VL S +     
Sbjct: 875 KIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLE 934

Query: 448 MPNKKDEIAVESIHRKQNLSASNSTFLQI 476
           +        +++  R ++ S   +  L++
Sbjct: 935 ISTLPYSTVLDAYLRNRDYSLGITKLLEM 963



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 160/327 (48%), Gaps = 3/327 (0%)

Query: 97  PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE--A 154
           PT   +N ++  Y   G+ +++ +LL  M +D++++P+  ++N L+ A      +    A
Sbjct: 59  PTVQVFNAMMGVYARSGRFDDARQLLDAM-RDQDIEPDLVSFNTLINARAKSGCLAAGVA 117

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
             +++++  +G++PDA+TYNTL  A +Q      A  +  EM  ++ RP+  T   +VS 
Sbjct: 118 LELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSV 177

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
           + + G  ++A      + E    P+ V +NSL+  F    D + V++    + + G + D
Sbjct: 178 HGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKD 237

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
            +T++T++  +   G +     ++D+M   G  PD   +++L     +     +A  +L 
Sbjct: 238 GITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLE 297

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            M   G+ P +V F+ +I  +  + +   A   +++M E G+ P+   Y  +L  +  + 
Sbjct: 298 EMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSD 357

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLV 421
           +  +   L + M + G +P     Q++
Sbjct: 358 ETRKLMVLYRAMIKDGYKPDDGLYQVL 384



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 143/280 (51%), Gaps = 3/280 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   E   I+N +   G+ P +  Y  +++ L   KRF+ +  +++++E  G KPD ++ 
Sbjct: 706 GDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVL 765

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++   + +GN D  ++++  + ++G +P   TYNTLI  Y    +PEE   LL  M +
Sbjct: 766 NTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGK 825

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + + P   +Y IL+ A       E+A  +  +M   G + +   Y+ + + Y       
Sbjct: 826 -RGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHS 884

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +AE +L  M+ + + P   T  I+++ Y   G+ ++A + L  +K   +  + + +++++
Sbjct: 885 KAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVL 944

Query: 248 KGFLDIKD-SDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
             +L  +D S G+ K L  M+  GV+PD   +++ + A S
Sbjct: 945 DAYLRNRDYSLGITKLLE-MKRDGVEPDHQVWTSFIRAAS 983



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/373 (20%), Positives = 171/373 (45%), Gaps = 7/373 (1%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            G    A  IF+ +I++G  PT+ +   ++ AL    R   +  ++ +++   +K      
Sbjct: 636  GLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTV 695

Query: 68   NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
              M+ A +++G+V E MKI+  MK +G  P    Y  +I    +  K    ++L+    +
Sbjct: 696  LLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCH-NKRFRDVELMVAEME 754

Query: 128  DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                KP+    N L+  +    + +    V + ++ +G++PD  TYNTL      Y   +
Sbjct: 755  GAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLI---VMYSRNF 811

Query: 188  RAEQ---MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
            R E+   +L+EM    + P   +  I+++   K    E A      M+      N  +++
Sbjct: 812  RPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYH 871

Query: 245  SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
             ++K + + ++    +  L+ M+E G++P + T   +M ++ ++G   + +++ + +  +
Sbjct: 872  MMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSS 931

Query: 305  GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
             +E     +S +   Y+R  +     + L  M++ GV P+  ++T+ I       +   A
Sbjct: 932  NLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDA 991

Query: 365  MSIYEKMCEIGIN 377
            + + + + + G +
Sbjct: 992  ILLLKSLQDCGFD 1004



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/379 (21%), Positives = 157/379 (41%), Gaps = 1/379 (0%)

Query: 32   YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
            +  L+ A      ++   ++   + K G  P     N M+ A    G +DE   + Q+++
Sbjct: 625  WNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQ 684

Query: 92   DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
            D   K + ST   +++ +   G   E +K+   M +     PN   Y I++   C     
Sbjct: 685  DLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGM-KAAGYLPNMHLYRIMISLLCHNKRF 743

Query: 152  EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
             +   +V +M  +G +PD V  NTL   Y   G   R  ++   +    + P+E T   +
Sbjct: 744  RDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTL 803

Query: 212  VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
            +  Y +    E+    LY M +  + P L  +  L+      K  +  D     M   G 
Sbjct: 804  IVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGY 863

Query: 272  KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            + +   +  +M  + +A    K + +   M + GIEP I    IL   Y  +G P +AE 
Sbjct: 864  RLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEK 923

Query: 332  ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
            +L S++   +  + + ++TV+  +         ++   +M   G+ P+ + + + +    
Sbjct: 924  VLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRAAS 983

Query: 392  EAKQPWRAEELLQVMEEKG 410
              +Q   A  LL+ +++ G
Sbjct: 984  LCEQTDDAILLLKSLQDCG 1002



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 113/230 (49%), Gaps = 5/230 (2%)

Query: 6    GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
            G G       +++ ++E G  P   TY TL+   +R  R +   +L+ ++ K G+ P   
Sbjct: 774  GTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLE 833

Query: 66   LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
             +  ++ A  ++   ++A  +F++M+  G +   S Y+ ++K Y N     ++  LL  M
Sbjct: 834  SYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAM 893

Query: 126  SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
             +D  ++P   T +IL+ ++ +    +EA  V+  + +S ++   + Y+T+  AY +  +
Sbjct: 894  KED-GIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRD 952

Query: 186  TYRAEQMLFEMQNNQVRPNER--TCGIIVSGYCKEGNMEDAMRFLYRMKE 233
                   L EM+ + V P+ +  T  I  +  C++ +  DA+  L  +++
Sbjct: 953  YSLGITKLLEMKRDGVEPDHQVWTSFIRAASLCEQTD--DAILLLKSLQD 1000


>gi|297836334|ref|XP_002886049.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331889|gb|EFH62308.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 755

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 197/393 (50%), Gaps = 11/393 (2%)

Query: 51  LISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG 110
           L+  ++  G++PD + F   I+   ++G + EA  +  K+K  G    + + +++I G+ 
Sbjct: 360 LLMGMKDYGIRPDIVAFTVFIDKLCKAGFLREATSVLFKLKLFGISQDSVSVSSVIDGFC 419

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
            VGKPEE++KL+        ++PN   Y+  +   CS   +  A  +  ++   G+ PD 
Sbjct: 420 KVGKPEEAIKLIHSF----RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDC 475

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
             Y T+   Y   G T +A Q    +  +   P+  T  +++    K G++ DA      
Sbjct: 476 YCYTTMIDGYCTLGRTDKAFQFFGALLKSGNPPSLITYTLLIGACSKFGSISDAESVFRI 535

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
           MK   +HP++V +N+L+ G+      + V + +  M   G+ PDV T++ ++ +    G 
Sbjct: 536 MKTEGLHPDVVTYNNLMYGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 595

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           + +  EI  ++++ G  P    F+ +  G  + G+ Q+A  +   M    V P+VV  + 
Sbjct: 596 VDEANEIISELIRRGFVPSALAFTDVIGGLSKRGDFQEAFILWFYMADLRVKPDVVTCSA 655

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           ++ G+C A +M++A+ +++K+ + G+ P++  Y TL+ GY       +A EL+ +M ++G
Sbjct: 656 LLHGYCRAQRMEKAIVLFDKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 715

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           + P +ST         A+ +  E KR + S E 
Sbjct: 716 MLPNEST-------HHALVVGLEGKRFMNSEEH 741



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 140/286 (48%), Gaps = 6/286 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A  IF  + E G  P    YTT++       R          + K G  P  I +
Sbjct: 454 GDMLRASTIFQEIFELGLLPDCYCYTTMIDGYCTLGRTDKAFQFFGALLKSGNPPSLITY 513

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I ACS+ G++ +A  +F+ MK  G  P   TYN L+ GYG   +  +  +L+  M +
Sbjct: 514 TLLIGACSKFGSISDAESVFRIMKTEGLHPDVVTYNNLMYGYGKTHQLNKVFELIDEM-R 572

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              + P+  TYNIL+ +   +  ++EA  ++ +++  G  P A+ +  +    ++ G+  
Sbjct: 573 SAGISPDVATYNILIHSMVVRGYVDEANEIISELIRRGFVPSALAFTDVIGGLSKRGDFQ 632

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  + F M + +V+P+  TC  ++ GYC+   ME A+    ++ +  + P++V++N+LI
Sbjct: 633 EAFILWFYMADLRVKPDVVTCSALLHGYCRAQRMEKAIVLFDKLLDAGLKPDVVLYNTLI 692

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
            G+  + D +   + + LM + G+ P+  T   ++      GL GK
Sbjct: 693 HGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV-----VGLEGK 733



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 165/356 (46%), Gaps = 35/356 (9%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG---------------------- 59
           + G RP ++ +T  +  L +    +   S++ K++  G                      
Sbjct: 366 DYGIRPDIVAFTVFIDKLCKAGFLREATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPE 425

Query: 60  ----------MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY 109
                     ++P+  ++++ ++    +G++  A  IFQ++ + G  P    Y T+I GY
Sbjct: 426 EAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCYCYTTMIDGY 485

Query: 110 GNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK-NSIEEAWNVVYKMVASGIQP 168
             +G+ +++ +    + +  N  P+  TY +L+ A CSK  SI +A +V   M   G+ P
Sbjct: 486 CTLGRTDKAFQFFGALLKSGN-PPSLITYTLLIGA-CSKFGSISDAESVFRIMKTEGLHP 543

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           D VTYN L   Y +  +  +  +++ EM++  + P+  T  I++      G +++A   +
Sbjct: 544 DVVTYNNLMYGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYVDEANEII 603

Query: 229 YRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
             +      P+ + F  +I G     D          M +  VKPDVVT S ++  +  A
Sbjct: 604 SELIRRGFVPSALAFTDVIGGLSKRGDFQEAFILWFYMADLRVKPDVVTCSALLHGYCRA 663

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
             M K   +FD ++ AG++PD+ +++ L  GY   G+ +KA  ++  M + G+ PN
Sbjct: 664 QRMEKAIVLFDKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPN 719



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/349 (21%), Positives = 166/349 (47%), Gaps = 6/349 (1%)

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ-L 124
           +F  +I+ C +   VD A+K+  K+   G  P+     +L++        E + + ++ +
Sbjct: 270 VFCMLIDCCIKERKVDMALKLTYKIDQFGIFPSRGVCISLVEEILRAHGLELAREFVEHM 329

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           +S+ +++  N    ++ +R +CS    ++ W ++  M   GI+PD V +        + G
Sbjct: 330 LSRGRHL--NAALLSLFIRKYCSDGYFDKGWELLMGMKDYGIRPDIVAFTVFIDKLCKAG 387

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
               A  +LF+++   +  +  +   ++ G+CK G  E+A++ ++  +   + PN+ V++
Sbjct: 388 FLREATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYS 444

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           S +       D          + E G+ PD   ++T++D + + G   K  + F  ++K+
Sbjct: 445 SFLSNICSTGDMLRASTIFQEIFELGLLPDCYCYTTMIDGYCTLGRTDKAFQFFGALLKS 504

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G  P +  +++L     + G    AES+   M+  G+HP+VV +  ++ G+    ++ + 
Sbjct: 505 GNPPSLITYTLLIGACSKFGSISDAESVFRIMKTEGLHPDVVTYNNLMYGYGKTHQLNKV 564

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             + ++M   GI+P++ TY  L+           A E++  +  +G  P
Sbjct: 565 FELIDEMRSAGISPDVATYNILIHSMVVRGYVDEANEIISELIRRGFVP 613



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 149/305 (48%), Gaps = 10/305 (3%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GKP EA  + +       RP +  Y++ ++ +          ++  ++ + G+ PD   +
Sbjct: 422 GKPEEAIKLIHSF---RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCYCY 478

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             MI+     G  D+A + F  +  SG  P+  TY  LI      G   ++  + ++M +
Sbjct: 479 TTMIDGYCTLGRTDKAFQFFGALLKSGNPPSLITYTLLIGACSKFGSISDAESVFRIM-K 537

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + + P+  TYN L+  +   + + + + ++ +M ++GI PD  TYN L  +    G   
Sbjct: 538 TEGLHPDVVTYNNLMYGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYVD 597

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A +++ E+      P+      ++ G  K G+ ++A    + M +L V P++V  ++L+
Sbjct: 598 EANEIISELIRRGFVPSALAFTDVIGGLSKRGDFQEAFILWFYMADLRVKPDVVTCSALL 657

Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            G+     +  ++KA+ L ++    G+KPDVV ++T++  + S G + K  E+   MV+ 
Sbjct: 658 HGYC---RAQRMEKAIVLFDKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQR 714

Query: 305 GIEPD 309
           G+ P+
Sbjct: 715 GMLPN 719



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 122/255 (47%), Gaps = 11/255 (4%)

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A ++ +++    + P+   C  +V    +   +E A  F+  M     H N  + +  I+
Sbjct: 287 ALKLTYKIDQFGIFPSRGVCISLVEEILRAHGLELAREFVEHMLSRGRHLNAALLSLFIR 346

Query: 249 GFLDIKDSDG-VDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            +     SDG  DK   L   M+++G++PD+V F+  +D    AG + +   +   +   
Sbjct: 347 KYC----SDGYFDKGWELLMGMKDYGIRPDIVAFTVFIDKLCKAGFLREATSVLFKLKLF 402

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           GI  D    S +  G+ + G+P++A  ++ S R   + PN+ ++++ +S  C+   M RA
Sbjct: 403 GISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRA 459

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
            +I++++ E+G+ P+   Y T++ GY    +  +A +    + + G  P   T  L+  +
Sbjct: 460 STIFQEIFELGLLPDCYCYTTMIDGYCTLGRTDKAFQFFGALLKSGNPPSLITYTLLIGA 519

Query: 425 WRAIGLAREAKRVLK 439
               G   +A+ V +
Sbjct: 520 CSKFGSISDAESVFR 534



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 81/139 (58%), Gaps = 1/139 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           +V +G   EA+ I + LI  G  P+ + +T ++  L+++  F+    L   +    +KPD
Sbjct: 590 MVVRGYVDEANEIISELIRRGFVPSALAFTDVIGGLSKRGDFQEAFILWFYMADLRVKPD 649

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +  +A+++    +  +++A+ +F K+ D+G KP    YNTLI GY +VG  E++ +L+ 
Sbjct: 650 VVTCSALLHGYCRAQRMEKAIVLFDKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIG 709

Query: 124 LMSQDKNVKPNDRTYNILV 142
           LM Q + + PN+ T++ LV
Sbjct: 710 LMVQ-RGMLPNESTHHALV 727



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 55/105 (52%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G   EA  ++  + +   +P ++T + L+    R +R +  + L  K+   G+KPD
Sbjct: 625 LSKRGDFQEAFILWFYMADLRVKPDVVTCSALLHGYCRAQRMEKAIVLFDKLLDAGLKPD 684

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
            +L+N +I+     G++++A ++   M   G  P  ST++ L+ G
Sbjct: 685 VVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVVG 729


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/495 (23%), Positives = 228/495 (46%), Gaps = 42/495 (8%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  ++  + + G +PT++TY T++ +  ++ R    L L+S++++ G  P+ + +N ++
Sbjct: 198 KAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLV 257

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK-- 129
           N  S+ G +++A  + ++M +SG   +  TYN LI G+   G   E+  L++ M   +  
Sbjct: 258 NGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAF 317

Query: 130 --------------------------------NVKPNDRTYNILVRAWCSKNSIEEAWNV 157
                                              P+  ++N L+  +C    I EA+ +
Sbjct: 318 PTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLL 377

Query: 158 VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
             ++    + P  +TYNTL      +G    A ++  EM +  + P+  T  I+V+G  K
Sbjct: 378 FDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFK 437

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPD 274
            G +  A  F   M    + P+   +N+ I G + I D+     A ++ EE    G  PD
Sbjct: 438 LGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTS---VAFSMQEEMLAAGFPPD 494

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           V+T++  + A    G   +  ++ ++MV  G+ PD   ++ +  G+V+ G  +KA  +  
Sbjct: 495 VITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFN 554

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            M   GV P+VV +T +I        +  A   + KM E  +  N+ TY  ++ G    +
Sbjct: 555 EMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTR 614

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK-KD 453
           +   A +    MEEKG+ P K +  ++ +    +G   EA R+ +    DR+  P+    
Sbjct: 615 RMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREM-LDRKIQPDSFTH 673

Query: 454 EIAVESIHRKQNLSA 468
            + ++++HR   + A
Sbjct: 674 SVFLKNLHRDYQVHA 688



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/412 (23%), Positives = 195/412 (47%), Gaps = 1/412 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F+ +I  G  P +     ++  L  +       ++   +E+ G+KP  + +N M+++  
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G VD+A+++  +M++ GC P   TYN L+ G    G+ E++  L++ M  +  +  + 
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEM-LNSGLNVSA 285

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TYN L+  +C K    EA+++V +MV     P   TYNTL     ++ +         +
Sbjct: 286 YTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSD 345

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M  ++  P+  +   ++ GYC+ G + +A      +K  ++ P ++ +N+LI G      
Sbjct: 346 MLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGY 405

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D   +    M + G+ PD+ T++ +++     G +   +  F++M+  G++PD   ++ 
Sbjct: 406 LDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNT 465

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
              G ++  +   A S+   M   G  P+V+ +   +   C     + A  + E M   G
Sbjct: 466 RIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDG 525

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           + P+  TY +++ G+ +     +A E+   M  KGV P   T  ++  +  A
Sbjct: 526 LIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAA 577



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 198/442 (44%), Gaps = 18/442 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIE-EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG 59
           ++ILVG    H A+++   ++  E H    +     V  L           +  K+ ++G
Sbjct: 126 LDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGHVXCLL----------VFDKMIRNG 175

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + PD    N ++    +   + +A  ++  M+  G KPT  TYNT++  Y   G+ +++L
Sbjct: 176 LLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQAL 235

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +LL  M Q++   PND TYN+LV     K  +E+A  ++ +M+ SG+   A TYN L   
Sbjct: 236 ELLSEM-QERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLING 294

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + Q G    A  ++ EM N +  P   T   ++ G CK   +         M + +  P+
Sbjct: 295 FCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPD 354

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQE 296
           +V FNSL+ G+     +  + +A  L +E   +   P V+T++T++      G +     
Sbjct: 355 IVSFNSLLYGYC---RTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALR 411

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +  +M   G+ PDI  ++IL  G  + G    A      M   G+ P+   + T I G  
Sbjct: 412 LKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEM 471

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
                  A S+ E+M   G  P++ TY   +    +      A +LL+ M   G+ P   
Sbjct: 472 KIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHV 531

Query: 417 TIQLVADSWRAIGLAREAKRVL 438
           T   + + +   G  R+A+ V 
Sbjct: 532 TYTSIINGFVKNGHLRKAREVF 553



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N  V  G   +A  +FN ++ +G  P+++TYT L+ A   ++         SK+ +  +
Sbjct: 537 INGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSV 596

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             + I +NA+IN    +  +DEA K F +M++ G  P   +Y  LI    N+G  EE+L+
Sbjct: 597 PANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALR 656

Query: 121 LLQLMSQDKNVKPNDRTYNILVR 143
           L + M  D+ ++P+  T+++ ++
Sbjct: 657 LYREM-LDRKIQPDSFTHSVFLK 678


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 200/389 (51%), Gaps = 4/389 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM-KPDSILFNAMINACSESGNVDE 82
           G  P L TY  L A L +  +      L  ++E+ G+  PD + +N +++AC +     +
Sbjct: 309 GFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSD 368

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+ + ++M++ G K +  T+N ++KG    G+ EE+L  L++M+++  + P+  TYN L+
Sbjct: 369 ALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEE-GLTPDVITYNTLI 427

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
            A C   ++ +A+ ++ +MV SG++ D  T NTL     +      AE++L         
Sbjct: 428 DASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFV 487

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI-KDSDGVDK 261
           P+E + G +++ Y KE   E A+     M + ++ P++  +N+LIKG   + K ++ +DK
Sbjct: 488 PDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDK 547

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
              LM E G+ PD  T++ I+ A+   G + K  +  + MV+   +PD+   + L  G  
Sbjct: 548 LNELM-EMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLC 606

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
             G  +KA  +  S  + G   +V+ + T+I   C    +  A+  +  M   G+ P++ 
Sbjct: 607 LYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVF 666

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           TY  LL    EA +   A+++L  + E G
Sbjct: 667 TYNVLLSALSEAGRSVEAQKMLHKLNESG 695



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/508 (25%), Positives = 221/508 (43%), Gaps = 78/508 (15%)

Query: 10  PHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNA 69
           P  +   F+ LI     P   T+  LV     +      LS +SK++  G+ PD++ +N 
Sbjct: 190 PQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNT 249

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK 129
           ++NA    G + EA  +  +MK  G  PT +TYNTL+  Y  +G  +++  +++ M+   
Sbjct: 250 LLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTA-F 308

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGI-QPDAVTYNTLARAYAQYGETYR 188
             +P+  TYN+L    C    ++EA+ +  +M   GI  PD VTYNTL  A  +   +  
Sbjct: 309 GFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSD 368

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A  +L EM+   V+ +  T  IIV G C+EG +E+A+  L  M E  + P+++ +N+LI 
Sbjct: 369 ALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLID 428

Query: 249 GFLDIKDSDGVDKALTLMEEF--------------------------------------G 270
                  +  V KA  LM+E                                       G
Sbjct: 429 ASCK---AGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRG 485

Query: 271 VKPDVVTFSTIMDAW--------------------------------SSAGLMGKCQEIF 298
             PD V++ T+M A+                                     MGK  E  
Sbjct: 486 FVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAI 545

Query: 299 D---DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           D   ++++ G+ PD   ++I+   Y + G+ +KA      M +    P+VV   T+++G 
Sbjct: 546 DKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGL 605

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
           C   ++++AM ++E   E G   ++ TY TL+    +      A      ME +G++P  
Sbjct: 606 CLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDV 665

Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEE 443
            T  ++  +    G + EA+++L    E
Sbjct: 666 FTYNVLLSALSEAGRSVEAQKMLHKLNE 693



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 185/395 (46%), Gaps = 18/395 (4%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  EA      + EEG  P +ITY TL+ A  +         L+ ++ + G+K D
Sbjct: 395 LCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMD 454

Query: 64  SILFNAMI-NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           +   N ++ N C E    +EA ++ +     G  P   +Y T++  Y    KPE +L L 
Sbjct: 455 TFTLNTLLYNLCKEK-RYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLW 513

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             M + K + P+  TYN L++   +   + EA + + +++  G+ PD  TYN +  AY +
Sbjct: 514 DEMIKRK-LTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCK 572

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+  +A Q   +M  N  +P+  TC  +++G C  G +E AM+      E     +++ 
Sbjct: 573 EGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVIT 632

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +N+LI+      D D   +    ME  G++PDV T++ ++ A S AG   + Q++   + 
Sbjct: 633 YNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLN 692

Query: 303 KAG------IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG--VHPNVVMFTTVISG 354
           ++G        P I       K  V A E  K   + + +   G     +   +   I  
Sbjct: 693 ESGKLYGRFFYPSI-------KSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKE 745

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
            C   +++ A ++ ++M + G++ +  TY TL+ G
Sbjct: 746 LCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEG 780



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/358 (24%), Positives = 161/358 (44%), Gaps = 46/358 (12%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGC-KPTTSTYNTLIKGYGNV--GKPEES 118
           P S L +A ++  +       A ++    +  GC +P+    N ++          P+ S
Sbjct: 134 PTSALADAALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQAS 193

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           L     +   + + PN  T+N+LV   CSK ++ +A + + KM   G+ PDAVTYNTL  
Sbjct: 194 LDAFHSLIALR-LHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTL-- 250

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
                                            ++ +C++G + +A   L RMK+  + P
Sbjct: 251 ---------------------------------LNAHCRKGMLGEARTLLARMKKEGIVP 277

Query: 239 NLVVFNSLIKGFLD---IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
               +N+L+  +     IK +  V +A+T    FG +PD+ T++ +      AG + +  
Sbjct: 278 TRATYNTLVSAYARLGWIKQATDVVEAMT---AFGFEPDLWTYNVLAAGLCQAGKVDEAF 334

Query: 296 EIFDDMVKAGI-EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
           ++ D+M + GI  PD+  ++ L     +      A ++L  MR+ GV  ++V    ++ G
Sbjct: 335 KLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKG 394

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
            C   +++ A+   E M E G+ P++ TY TL+    +A    +A  L+  M   G++
Sbjct: 395 LCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLK 452



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 168/358 (46%), Gaps = 6/358 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  + + ++  G +    T  TL+  L ++KR++    L+    + G  PD + +
Sbjct: 434 GNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSY 493

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL-KLLQLMS 126
             ++ A  +    + A+ ++ +M      P+ STYNTLIKG   +GK  E++ KL +LM 
Sbjct: 494 GTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELM- 552

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            +  + P+D TYNI++ A+C +  +E+A+    KMV +  +PD VT NTL      YG  
Sbjct: 553 -EMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRL 611

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A ++         + +  T   ++   CK+ +++ A+RF   M+   + P++  +N L
Sbjct: 612 EKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVL 671

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +    +   S    K L  + E G       + +I  +  +    GK  E+  D+   G 
Sbjct: 672 LSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVE-TGKDPEVKSDIESVGN 730

Query: 307 E--PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
               D   ++   K     G+ ++A+++L  M + G+  +   + T++ G     K Q
Sbjct: 731 TQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQKRQ 788



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 26/189 (13%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L   G+  +A  +F   +E+G +  +ITY TL+ AL +     + L   + +E  G+
Sbjct: 602 MNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGL 661

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKP--EES 118
           +PD   +N +++A SE+G   EA K+  K+ +SG            K YG    P  + S
Sbjct: 662 QPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESG------------KLYGRFFYPSIKSS 709

Query: 119 LKLLQLMSQDKNVKP-----------NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ 167
           ++ ++   +D  VK            +  +YN  ++  C    ++EA  V+ +M+  G+ 
Sbjct: 710 VEAVE-TGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMS 768

Query: 168 PDAVTYNTL 176
            D  TY TL
Sbjct: 769 VDNSTYITL 777



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 2/139 (1%)

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           V+  ++    V S LA+    +  PQ +     S+    +HPN   F  ++   C+   +
Sbjct: 168 VRPSLQAANAVLSALARS--PSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTL 225

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             A+S   KM   G++P+  TY TLL  +        A  LL  M+++G+ P ++T   +
Sbjct: 226 ADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTL 285

Query: 422 ADSWRAIGLAREAKRVLKS 440
             ++  +G  ++A  V+++
Sbjct: 286 VSAYARLGWIKQATDVVEA 304


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/445 (23%), Positives = 201/445 (45%), Gaps = 9/445 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+LV  G+  +A  +F    EE   P   TY +L+  L +  +      L+ ++   G+
Sbjct: 5   LNLLVRAGQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P   + N +I    ++G   +A+  F+ +  + C P   T+N L+      G+ EE+ +
Sbjct: 62  PPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M       PN  TY  ++   C    ++ A  ++  M  +G  P+ +TY+ L    
Sbjct: 122 IFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGL 181

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G T +   +L EM     +P+      +++G CK   +++A+  +  M     +P +
Sbjct: 182 CKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTV 241

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +NSL++ F   K  D   + + +M E G  PDV+ ++T++        +   Q +   
Sbjct: 242 VTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQ 301

Query: 301 MVKAGIEPDIHVFSILAKGYV---RAGEPQKAES---ILTSMRKYGVHPNVVMFTTVISG 354
           MV A   PD+  +S +  G     R     K E+   IL  M++ G  PN   +  VI G
Sbjct: 302 MVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEG 361

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C A K Q+A+++  +M +  + P+L ++  ++    ++     A ++  +M E+  +P 
Sbjct: 362 LCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPN 421

Query: 415 KSTIQLVADSWRAIGLAREAKRVLK 439
                 + D     G   +A RV +
Sbjct: 422 PVAYAALIDGLSKGGEVDKAVRVFE 446



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 194/394 (49%), Gaps = 10/394 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK   A  + + + E G  P +ITY+ LV  L +  R     +L+ ++ + G 
Sbjct: 143 INGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGF 202

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD I++N ++N   +S  +DEA+++ Q M  SGC PT  TYN+L++ +    + + + +
Sbjct: 203 QPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFR 262

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA--- 177
           L+Q+MS+ +   P+   YN ++   C    +++A  ++ +MVA+   PD +TY+T+    
Sbjct: 263 LIQVMSE-RGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGL 321

Query: 178 ----RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
               R  A + +   A ++L  M+     PN  T  +++ G C+    + A+  L RM +
Sbjct: 322 CKDWRVDADW-KLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMID 380

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
            EV P+L  F+ +I       D D   K   +M E   KP+ V ++ ++D  S  G + K
Sbjct: 381 SEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDK 440

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
              +F+ MV++   P +  ++ +  G    G  ++A  ++  M      P+   +  +I 
Sbjct: 441 AVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIR 499

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           G C    ++ A  +++ +   G    +  Y  L+
Sbjct: 500 GLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLV 533



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 142/311 (45%), Gaps = 8/311 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M +     +   A  +   + E G  P +I Y T++A L R  R     +L+ ++     
Sbjct: 248 MELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARC 307

Query: 61  KPDSILFNAMINACSESGNVDE------AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK 114
            PD I ++ +I+   +   VD       A +I + MK +GC P   TY  +I+G     K
Sbjct: 308 VPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARK 367

Query: 115 PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYN 174
            +++L LL+ M  D  V P+  ++++++ + C  + ++ A+ +   M     +P+ V Y 
Sbjct: 368 SQQALALLRRMI-DSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYA 426

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
            L    ++ GE  +A + +FE+     RP   T   ++ G C  G +E+A+R +  M   
Sbjct: 427 ALIDGLSKGGEVDKAVR-VFELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHK 485

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
           E  P+   + +LI+G   +   +   +    +E  G   +V  ++ +++       +   
Sbjct: 486 ECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDA 545

Query: 295 QEIFDDMVKAG 305
             + + +++AG
Sbjct: 546 HGVANKLIEAG 556


>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
 gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
          Length = 713

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 189/377 (50%), Gaps = 7/377 (1%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
            F+ L   G  PT  TY  +V   T+       L ++ +++K G+ P+ +++  +++  +
Sbjct: 293 FFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYA 352

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
             G+   A K+++ M  +G KP   TYN L+  +   G+ +++L +L+ + Q   + P  
Sbjct: 353 RGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENI-QANRLLPTI 411

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY  ++  +     I++A  V  ++  +G++P  V+YN+L    A+  +   A  ML E
Sbjct: 412 ETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDE 471

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M  N V PNER+   +  GY + G++E A     RMK+  +  ++V + +L+K       
Sbjct: 472 MLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCK--- 528

Query: 256 SDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           S  + +A+ + ++    G+K + +T+ T++D W+  G + K +++  DM K G   D   
Sbjct: 529 SGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTIC 588

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++   K   R+G+ ++    L  MR+  +  N   +TT+I GW  A    +A+S YE+  
Sbjct: 589 YTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAK 648

Query: 373 EIGINPNLKTYETLLWG 389
             G+  +      LL G
Sbjct: 649 ASGLQLDSALSNCLLSG 665



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/420 (24%), Positives = 199/420 (47%), Gaps = 1/420 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A + F     E   P  I Y ++V A  +    +++ +L++++E++G + +  L+
Sbjct: 215 GNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLY 274

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             ++N  +E  + ++ +  F ++K  G  PT +TY  ++K +   G   ++L +L+ M +
Sbjct: 275 TTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDK 334

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              V PN   Y +++  +        A+ V   MV++G++PD VTYN L  A+ + G   
Sbjct: 335 -HGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMD 393

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A  +L  +Q N++ P   T   I+ GY K G+++ A+    R+K   + P +V +NSL+
Sbjct: 394 KALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLL 453

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G    +  +     L  M   GV P+  +++ + + ++ AG + K   +F  M K  + 
Sbjct: 454 SGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLA 513

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
            DI  +  L K   ++G  Q+A  +   +   G+  N + + T++ GW    ++ +A  +
Sbjct: 514 IDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDL 573

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
            + M + G + +   Y + +     +       E L VM EK +     T   +   W A
Sbjct: 574 LKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLA 633



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 98/421 (23%), Positives = 203/421 (48%), Gaps = 7/421 (1%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P +  YT+L+ A    +  +  ++   ++   G++ +  +F ++I+  + +GN + A  
Sbjct: 163 KPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEH 222

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
            F+K K     P    YN++++ Y   G  E    LL  M +++  + N   Y  ++  +
Sbjct: 223 WFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQM-EEEGFQGNLGLYTTVLNGF 281

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                 E+  +  +++ A G+ P A TY  + + + + G   +A  +L EM  + V PN+
Sbjct: 282 AEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNK 341

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
               +I+ GY + G+   A +    M    + P++V +N L+  F     +  +DKAL +
Sbjct: 342 MIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFC---KAGRMDKALGV 398

Query: 266 MEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           +E        P + T+++I+D +   G + K  E+FD +  AG+ P +  ++ L  G  +
Sbjct: 399 LENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAK 458

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           A + + A  +L  M   GV PN   +T +  G+  A  +++A  ++++M +  +  ++  
Sbjct: 459 ARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVA 518

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           Y  LL    ++    RA E+ Q + + G++  + T   + D W   G   +A+ +LK  +
Sbjct: 519 YGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQ 578

Query: 443 E 443
           +
Sbjct: 579 K 579



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 186/386 (48%), Gaps = 1/386 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P L  Y  LV    R     +  +    +    +KP+  ++ ++I+A +E+ +++ A+ 
Sbjct: 128 KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 187

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
             ++M   G +   + + ++I GY + G  E +    +    + N+ P    YN +V+A+
Sbjct: 188 CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAE-NLVPGGIVYNSIVQAY 246

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C   ++E    ++ +M   G Q +   Y T+   +A+  +  +       ++   + P  
Sbjct: 247 CQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTA 306

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T G IV  + K GNM  A+  L  M +  V PN +++  ++ G+    D     K    
Sbjct: 307 ATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWED 366

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M   G+KPD+VT++ ++ A+  AG M K   + +++    + P I  ++ +  GYV+ G 
Sbjct: 367 MVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGH 426

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            QKA  +   ++  G+ P VV + +++SG   A +M+ A  + ++M   G+ PN ++Y  
Sbjct: 427 IQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTA 486

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGV 411
           L  GY  A    +A  + Q M+++ +
Sbjct: 487 LTEGYARAGDVEKAFGMFQRMKKENL 512



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 182/372 (48%), Gaps = 7/372 (1%)

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP    +  +++  +  G+   A   F+ M+ S  KP    Y +LI  Y      E ++ 
Sbjct: 128 KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 187

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             + M   + ++ N+  +  ++  + S  + E A +   K  A  + P  + YN++ +AY
Sbjct: 188 CTEEM-LSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAY 246

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G     E +L +M+    + N      +++G+ +  + E  + F +R+K   + P  
Sbjct: 247 CQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTA 306

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             +  ++K F     +  + KAL ++EE    GV P+ + ++ IMD ++  G      ++
Sbjct: 307 ATYGCIVKLF---TKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKV 363

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           ++DMV AG++PDI  ++IL   + +AG   KA  +L +++   + P +  +T+++ G+  
Sbjct: 364 WEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVK 423

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              +Q+A+ +++++   G+ P + +Y +LL G  +A+Q   A  +L  M   GV P + +
Sbjct: 424 GGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERS 483

Query: 418 IQLVADSWRAIG 429
              + + +   G
Sbjct: 484 YTALTEGYARAG 495



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 161/338 (47%), Gaps = 5/338 (1%)

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           ++GN  + +  FQ +     KP    Y  L+  Y   G    +    + M +  ++KPN 
Sbjct: 112 DAGNWHKIVNAFQVID----KPVLREYGLLVDFYARHGDKVAARATFEAM-RASHIKPNV 166

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
             Y  L+ A+     +E A     +M++ GIQ +   + ++   YA  G    AE    +
Sbjct: 167 HIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEK 226

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
            +   + P       IV  YC+ GNME     L +M+E     NL ++ +++ GF +I+D
Sbjct: 227 FKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRD 286

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            +        ++  G+ P   T+  I+  ++ AG M K  +I ++M K G+ P+  ++++
Sbjct: 287 EEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAM 346

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           +  GY R G+   A  +   M   G+ P++V +  ++  +C A +M +A+ + E +    
Sbjct: 347 IMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANR 406

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           + P ++TY ++L GY +     +A E+   ++  G+RP
Sbjct: 407 LLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRP 444



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 143/307 (46%)

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           KP  R Y +LV  +        A      M AS I+P+   Y +L  AYA+  +   A  
Sbjct: 128 KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 187

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
              EM +  ++ NE     I+SGY   GN E A  +  + K   + P  +V+NS+++ + 
Sbjct: 188 CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYC 247

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
              + + V+  L  MEE G + ++  ++T+++ ++      KC   F  +   G+ P   
Sbjct: 248 QAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAA 307

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            +  + K + +AG   KA  IL  M K+GV PN +++  ++ G+        A  ++E M
Sbjct: 308 TYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDM 367

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
              G+ P++ TY  L+  + +A +  +A  +L+ ++   + P   T   + D +   G  
Sbjct: 368 VSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHI 427

Query: 432 REAKRVL 438
           ++A  V 
Sbjct: 428 QKALEVF 434



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/302 (21%), Positives = 149/302 (49%), Gaps = 1/302 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G +P ++TY  LV A  +  R    L ++  ++ + + P    + ++++   + G+
Sbjct: 367 MVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGH 426

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           + +A+++F ++K +G +P   +YN+L+ G     + E +  +L  M  +  V PN+R+Y 
Sbjct: 427 IQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLAN-GVVPNERSYT 485

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L   +     +E+A+ +  +M    +  D V Y  L +A  + G   RA ++  ++ + 
Sbjct: 486 ALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDA 545

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            ++ N  T   ++ G+ ++G +  A   L  M++   H + + + S IK      D++ V
Sbjct: 546 GLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEV 605

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            + L +M E  ++ +  T++T++  W +A    +    ++    +G++ D  + + L  G
Sbjct: 606 TETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLLSG 665

Query: 320 YV 321
            +
Sbjct: 666 LI 667



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/279 (20%), Positives = 126/279 (45%)

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR 226
           +P    Y  L   YA++G+   A      M+ + ++PN      ++  Y +  +ME A+ 
Sbjct: 128 KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 187

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
               M    +  N  VF S+I G+    +++  +      +   + P  + +++I+ A+ 
Sbjct: 188 CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYC 247

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
            AG M   + +   M + G + ++ +++ +  G+    + +K  S    ++  G+ P   
Sbjct: 248 QAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAA 307

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            +  ++  +  A  M +A+ I E+M + G++PN   Y  ++ GY        A ++ + M
Sbjct: 308 TYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDM 367

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
              G++P   T  ++  ++   G   +A  VL++ + +R
Sbjct: 368 VSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANR 406



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 52/112 (46%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A  +F  + + G +   ITY T++    R+        L+  ++K G   D+I +
Sbjct: 530 GAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICY 589

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
            + I AC  SG+ +E  +    M++   +    TY TLI G+     P++++
Sbjct: 590 TSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAI 641


>gi|242038885|ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
 gi|241920691|gb|EER93835.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
          Length = 1014

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/474 (23%), Positives = 221/474 (46%), Gaps = 21/474 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N   G+GK + AHY+FN ++ +   P++ TYTT++    R +R    LS++S+++  G+
Sbjct: 334 INGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGV 393

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P  I                +A +I + M + G  P   TY+ LI    N G   E+  
Sbjct: 394 MPSEI---------------SKAKQILKSMLEDGIDPDIVTYSALI----NEGMITEAEH 434

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             Q MS+ K +  +  ++N ++ ++C + +I EA+ V   MV  G  P+  TY  L R  
Sbjct: 435 FRQYMSRMK-ISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGL 493

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G   +A+Q +F + +     +E+T   ++ G CK G +++A+    +M +    P++
Sbjct: 494 CQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDI 553

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +  L+ GF            L +M + GV PD V ++ +++   + G +     +F +
Sbjct: 554 HTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQE 613

Query: 301 MV-KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           ++ K G+  D   ++ L  GY++ G     + +++ M +  V+PN   +  ++ G+    
Sbjct: 614 IICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGG 673

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           +  +++ +Y+ M   GI P+  TY  L+ G  E      A + L+ M  +G+ P +    
Sbjct: 674 QFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFD 733

Query: 420 LVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF 473
           ++  ++        A ++    +  R S  +K     +  + RK  L  S+   
Sbjct: 734 ILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVL 787



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/440 (24%), Positives = 216/440 (49%), Gaps = 16/440 (3%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE-KDGMKPDSI 65
           KGK   A  +   ++++G  P  + YT L+  L  + + K+   +  ++  K+G+  D I
Sbjct: 566 KGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCI 625

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            +N+++N   + GN++   ++   M  S   P +++YN L+ GY   G+  +SL L + M
Sbjct: 626 AYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYM 685

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
            + K ++P++ TY +L+        I+ A   + KMV  GI PD + ++ L  A+++  +
Sbjct: 686 VR-KGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSK 744

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
            + A Q+   M+  ++ P+ +T   +++G  ++  ++ +   L  M ++ + PN   + +
Sbjct: 745 MHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIA 804

Query: 246 LIKGFLDIKDSDGVDKALTLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           L+     +     +D+A  L EE    G+ P  V  S+I+      G + +   +F  M+
Sbjct: 805 LVNAKCRVGK---IDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMM 861

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           ++G+ P +  F+ L     +  +   A  +   M    +  +VV +  +I+G C   ++ 
Sbjct: 862 RSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDKRIS 921

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL-- 420
            A+ +YE+M   G+ PN+ TY TL             EELL+ +EE+G+ P    +QL  
Sbjct: 922 DALDLYEEMKSKGLWPNVTTYITLTGAMYSTGIMQNGEELLEDIEERGLIP--VYVQLEN 979

Query: 421 ----VADSWRAIGLAREAKR 436
               + D+ R + + R  ++
Sbjct: 980 LERQMEDAIRRLNMIRNCRK 999



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/427 (23%), Positives = 202/427 (47%), Gaps = 8/427 (1%)

Query: 18  NCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSES 77
           NCL      P + TYT L++   R+ +    L ++  +   G+ PD++ +  ++N     
Sbjct: 548 NCL------PDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINE 601

Query: 78  GNVDEAMKIFQKMK-DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
           G V  A  +FQ++    G       YN+L+ GY   G      +++  M Q + V PN  
Sbjct: 602 GQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSE-VYPNSA 660

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
           +YNIL+  +       ++  +   MV  GI+PD VTY  L    ++ G    A + L +M
Sbjct: 661 SYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKM 720

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
               + P+     I+++ + ++  M +A++    MK L + P+   ++++I G +     
Sbjct: 721 VLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYL 780

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           D   + L  M + G++P+   +  +++A    G + +   + ++M   GI P     S +
Sbjct: 781 DQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSI 840

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
            +G  + G+ ++A  + ++M + G+ P V  FTT++   C   K+  A+ +   M    +
Sbjct: 841 IRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRL 900

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
             ++ +Y  L+ G  + K+   A +L + M+ KG+ P  +T   +  +  + G+ +  + 
Sbjct: 901 KVDVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPNVTTYITLTGAMYSTGIMQNGEE 960

Query: 437 VLKSAEE 443
           +L+  EE
Sbjct: 961 LLEDIEE 967



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/444 (22%), Positives = 198/444 (44%), Gaps = 51/444 (11%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLV------AALTRQKRFK-SILSLISKVEKDG 59
           +G   EA  +++ ++  GH P + TY  L+        L + K+F   +L + S +    
Sbjct: 461 RGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAI---- 516

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
              D   FNA++    + G +DEA+ + +KM  + C P   TY  L+ G+   GK   +L
Sbjct: 517 ---DEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPAL 573

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA------------------------- 154
            +LQ+M  DK V P+   Y  L+    ++  ++ A                         
Sbjct: 574 IMLQMM-LDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMN 632

Query: 155 -------WNVVYKMVA----SGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
                   N + +M++    S + P++ +YN L   Y + G+  ++  +   M    +RP
Sbjct: 633 GYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRP 692

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T  +++ G  + G ++ A++FL +M    + P+ +VF+ LI  F +        +  
Sbjct: 693 DNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLF 752

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M+   + P   T+S +++       + +  E+  +M++ G++P+   +  L     R 
Sbjct: 753 NCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRV 812

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+  +A  +   M+  G+ P  V  +++I G C   K++ A+ ++  M   G+ P + T+
Sbjct: 813 GKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATF 872

Query: 384 ETLLWGYGEAKQPWRAEELLQVME 407
            TL+    +  +   A  L ++ME
Sbjct: 873 TTLMHCLCKESKIADALHLKRLME 896



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 155/312 (49%), Gaps = 9/312 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+  V  G+  ++ Y++  ++ +G RP  +TY  L+  L+        +  + K+  +G+
Sbjct: 666 MHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGI 725

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD ++F+ +I A SE   +  A+++F  MK     P++ TY+ +I G       ++S +
Sbjct: 726 FPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHE 785

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+ M Q   ++PN   Y  LV A C    I+ A+ +  +M A GI P  V  +++ R  
Sbjct: 786 VLREMLQ-VGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGL 844

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A  +   M  + + P   T   ++   CKE  + DA+     M+   +  ++
Sbjct: 845 CKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRLKVDV 904

Query: 241 VVFNSLIKGFL-DIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE 296
           V +N LI G   D + SD +D    L EE    G+ P+V T+ T+  A  S G+M   +E
Sbjct: 905 VSYNVLITGLCKDKRISDALD----LYEEMKSKGLWPNVTTYITLTGAMYSTGIMQNGEE 960

Query: 297 IFDDMVKAGIEP 308
           + +D+ + G+ P
Sbjct: 961 LLEDIEERGLIP 972



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/439 (22%), Positives = 180/439 (41%), Gaps = 61/439 (13%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE------------- 76
           + +  LV A  ++++       +  ++  G K   I  N ++ A  E             
Sbjct: 154 VVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPIACNTILRALVEQGESKYVWLFLRE 213

Query: 77  ----------------------SGNVDEAMKIFQKMKDSGCKPTTS-TYNTLIKGYGNVG 113
                                 +G   +A  + QKMK   C+ + S TYNT++  Y   G
Sbjct: 214 SLAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKT--CRLSNSVTYNTILHWYVKKG 271

Query: 114 KPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY 173
           + + +L +L+ M +D ++  +  TYNI++   C       A+ ++ +M    + PD  TY
Sbjct: 272 RFKAALCVLEDMERD-SIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTY 330

Query: 174 NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
           NTL   +   G+   A  +   M      P+  T   ++ GYC+   ++ A+  L  M+ 
Sbjct: 331 NTLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQI 390

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALT-------------------LMEEFGVKPD 274
             V P+ +   S  K  L     DG+D  +                     M    +  D
Sbjct: 391 TGVMPSEI---SKAKQILKSMLEDGIDPDIVTYSALINEGMITEAEHFRQYMSRMKISFD 447

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
            V+F+ I+D++   G + +   ++D MV+ G  P++  +  L +G  + G   +A+  + 
Sbjct: 448 SVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMF 507

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            +       +   F  ++ G C    +  A+ + EKM +    P++ TY  LL G+    
Sbjct: 508 CLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKG 567

Query: 395 QPWRAEELLQVMEEKGVRP 413
           +   A  +LQ+M +KGV P
Sbjct: 568 KILPALIMLQMMLDKGVVP 586



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 71/324 (21%), Positives = 132/324 (40%), Gaps = 53/324 (16%)

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+++S+  +   N   + +LV+A+  +  + +A   V  M   G +   +  NT+ RA 
Sbjct: 141 LLRIISRFDST--NHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPIACNTILRAL 198

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + GE+      L E   +    +  TC I+++  C  G    A   L +MK   +    
Sbjct: 199 VEQGESKYVWLFLRESLAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKTCRL---- 254

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
                                            + VT++TI+  +   G       + +D
Sbjct: 255 --------------------------------SNSVTYNTILHWYVKKGRFKAALCVLED 282

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M +  I  DI+ ++I+     R     +A  +L  MRK  + P+   + T+I+G+    K
Sbjct: 283 MERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGK 342

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A  ++  M      P++ TY T++ GY   ++  +A  +L  M+  GV P + +   
Sbjct: 343 INHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPSEIS--- 399

Query: 421 VADSWRAIGLAREAKRVLKSAEED 444
                       +AK++LKS  ED
Sbjct: 400 ------------KAKQILKSMLED 411


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 192/400 (48%), Gaps = 4/400 (1%)

Query: 25  HRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAM 84
           HRP+  +   L+A L   KR            +  + PD   FN +I+     G + +A 
Sbjct: 152 HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
            + + +K  G  P+ +TYN+LI GY   G  G       LL+ M +   + P   T+ +L
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVE-AGISPTAVTFGVL 270

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +  +C  ++   A  V  +M   GI    VTYN+L       G+     +++ EM++  +
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            PNE T G ++ G+CK+G M DA  ++  M E  V P++V++N LI  +  +   +    
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMA 390

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
               M + G+ P+V T++ ++  +S +G       + D+M + GIE D+  +++L     
Sbjct: 391 VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALC 450

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
             GE +KA  +L  M + G+ PN + + T+I G+C+   ++ A  I  +M +     N+ 
Sbjct: 451 CKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVV 510

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           TY   +  + +  +   A +LL  M +K + P   T + +
Sbjct: 511 TYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI 550



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 194/393 (49%), Gaps = 5/393 (1%)

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P +   NA++     +  VD A K F+        P   T+NT+I G   +G+  ++  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV---VYKMVASGIQPDAVTYNTLA 177
           + + + +   + P+  TYN L+  +C K      ++V   + +MV +GI P AVT+  L 
Sbjct: 213 VAKDI-KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
             Y +   T  A ++  EM+   +  +  T   ++SG C EG +E+ ++ +  M++L + 
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           PN + F  ++KGF         +  +  M E  V+PDVV ++ ++D +   G M     +
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAV 391

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            + M K GI P++  ++ L  G+ R+G+ + A  +L  M++ G+  +VV +  +I   C 
Sbjct: 392 KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCC 451

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             ++++A+ + ++M E+G+ PN  TY T++ G+ +      A E+   ME+   R    T
Sbjct: 452 KGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVT 511

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
             +    +  IG   EA  +L     D+  +PN
Sbjct: 512 YNVFIKYFCQIGKMDEANDLLNEM-LDKCLVPN 543



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 160/319 (50%), Gaps = 1/319 (0%)

Query: 6   GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
           G G  +    +   ++E G  PT +T+  L+    +     + + +  ++++ G+    +
Sbjct: 241 GAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVV 300

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            +N++I+     G V+E +K+ ++M+D G  P   T+  ++KG+   G   ++   +  M
Sbjct: 301 TYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGM 360

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           ++ +NV+P+   YNIL+  +     +E+A  V   M   GI P+  TYN L   +++ G+
Sbjct: 361 TE-RNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGD 419

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A  +L EM+   +  +  T  +++   C +G +  A++ L  M E+ + PN + +N+
Sbjct: 420 WRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNT 479

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           +I+GF D  +     +  T ME+   + +VVT++  +  +   G M +  ++ ++M+   
Sbjct: 480 IIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKC 539

Query: 306 IEPDIHVFSILAKGYVRAG 324
           + P+   +  + +G +  G
Sbjct: 540 LVPNGITYETIKEGMMEKG 558



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 106/217 (48%), Gaps = 1/217 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG   +A+   + + E    P ++ Y  L+    R  + +  +++   + K G+ P+   
Sbjct: 347 KGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTT 406

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I   S SG+   A  +  +MK+ G +    TYN LI      G+  +++KLL  MS
Sbjct: 407 YNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMS 466

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +   ++PN  TYN +++ +C K +I+ A+ +  +M     + + VTYN   + + Q G+ 
Sbjct: 467 E-VGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKM 525

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED 223
             A  +L EM +  + PN  T   I  G  ++G   D
Sbjct: 526 DEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 189/388 (48%), Gaps = 4/388 (1%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           T+  ++  L ++ + K     +  +E  G+KP  + +N ++   S  G ++ A  I  +M
Sbjct: 227 TFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEM 286

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
           K  G +P   TYN ++    N G+  E L+ ++    +  + P+  +YNIL+R   +   
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNEGRASEVLREMK----EIGLVPDSVSYNILIRGCSNNGD 342

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           +E A+    +MV  G+ P   TYNTL        +   AE ++ E++   +  +  T  I
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           +++GYC+ G+ + A      M    + P    + SLI        +   D+    +   G
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           +KPD+V  +T+MD   + G M +   +  +M    I PD   ++ L +G    G+ ++A 
Sbjct: 463 MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAR 522

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            ++  M++ G+ P+ + + T+ISG+      + A  + ++M  +G NP L TY  LL G 
Sbjct: 523 ELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGL 582

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            + ++   AEELL+ M+ +G+ P  S+ 
Sbjct: 583 SKNQEGELAEELLREMKSEGIVPNDSSF 610



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 179/351 (50%), Gaps = 4/351 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G+   A  I + +  +G +P + TY  +++ +  + R   +L  + ++   G+ PDS+ 
Sbjct: 273 RGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI---GLVPDSVS 329

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I  CS +G+++ A     +M   G  PT  TYNTLI G     K E +  L++ + 
Sbjct: 330 YNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREI- 388

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++K +  +  TYNIL+  +C     ++A+ +  +M+  GIQP   TY +L     +  +T
Sbjct: 389 REKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKT 448

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+++  ++    ++P+      ++ G+C  GNM+ A   L  M  + ++P+ V +N L
Sbjct: 449 READELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCL 508

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           ++G       +   + +  M+  G+KPD ++++T++  +S  G       + D+M+  G 
Sbjct: 509 MRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGF 568

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            P +  ++ L KG  +  E + AE +L  M+  G+ PN   F +VI    N
Sbjct: 569 NPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 186/383 (48%), Gaps = 4/383 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+L  +GK  +A      +   G +PT++TY TLV   + + R +    +IS+++  G 
Sbjct: 232 INVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGF 291

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD   +N +++     G   E   + ++MK+ G  P + +YN LI+G  N G  E +  
Sbjct: 292 QPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFA 348

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M +   V P   TYN L+     +N IE A  ++ ++   GI  D+VTYN L   Y
Sbjct: 349 YRDEMVKQGMV-PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGY 407

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q+G+  +A  +  EM  + ++P + T   ++   C++    +A     ++    + P+L
Sbjct: 408 CQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDL 467

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V+ N+L+ G   I + D     L  M+   + PD VT++ +M      G   + +E+  +
Sbjct: 468 VMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGE 527

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M + GI+PD   ++ L  GY + G+ + A  +   M   G +P ++ +  ++ G     +
Sbjct: 528 MKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQE 587

Query: 361 MQRAMSIYEKMCEIGINPNLKTY 383
            + A  +  +M   GI PN  ++
Sbjct: 588 GELAEELLREMKSEGIVPNDSSF 610



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 188/406 (46%), Gaps = 39/406 (9%)

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +ILF+ ++  C +   VDEA++ F  MK+ G  P T T N ++     + + E +     
Sbjct: 155 TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYA 214

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +   +K N  T+NI++   C +  +++A   +  M   GI+P  VTYNTL + ++  
Sbjct: 215 DMYR-MEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A  ++ EM++   +P+ +T   I+S  C EG   + +R    MKE+ + P+ V +
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSY 330

Query: 244 NSLIKGFLDIKD--------------------------------SDGVDKALTLMEEF-- 269
           N LI+G  +  D                                 + ++ A  L+ E   
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390

Query: 270 -GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G+  D VT++ +++ +   G   K   + D+M+  GI+P    ++ L     R  + ++
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE 450

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A+ +   +   G+ P++VM  T++ G C    M RA S+ ++M  + INP+  TY  L+ 
Sbjct: 451 ADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMR 510

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G     +   A EL+  M+ +G++P   +   +   +   G  + A
Sbjct: 511 GLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA 556



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/351 (22%), Positives = 159/351 (45%), Gaps = 32/351 (9%)

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           +++ D+    +   +++LVR  C    ++EA    Y M   G  P   T N +    ++ 
Sbjct: 144 VLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRL 203

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                A     +M   +++ N  T  I+++  CKEG ++ A  FL  M+   + P +V +
Sbjct: 204 NRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTY 263

Query: 244 NSLIKGFL----------------------DIKDSDGV----------DKALTLMEEFGV 271
           N+L++GF                       D++  + +           + L  M+E G+
Sbjct: 264 NTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGL 323

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            PD V+++ ++   S+ G +       D+MVK G+ P  + ++ L  G     + + AE 
Sbjct: 324 VPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEI 383

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           ++  +R+ G+  + V +  +I+G+C     ++A +++++M   GI P   TY +L++   
Sbjct: 384 LIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLC 443

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
              +   A+EL + +  KG++P    +  + D   AIG    A  +LK  +
Sbjct: 444 RKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMD 494



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 126/275 (45%), Gaps = 38/275 (13%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++++G  PT  TY TL+  L  + + ++   LI ++ + G+  DS+ +N +IN   + G+
Sbjct: 353 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGD 412

Query: 80  VDEAMKIFQKMKDSGCKPTTSTY-----------------------------------NT 104
             +A  +  +M   G +PT  TY                                   NT
Sbjct: 413 AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNT 472

Query: 105 LIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS 164
           L+ G+  +G  + +  LL+ M    ++ P+D TYN L+R  C +   EEA  ++ +M   
Sbjct: 473 LMDGHCAIGNMDRAFSLLKEMDM-MSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRR 531

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           GI+PD ++YNTL   Y++ G+T  A  +  EM +    P   T   ++ G  K    E A
Sbjct: 532 GIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELA 591

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGF--LDIKDSD 257
              L  MK   + PN   F S+I+    LD K SD
Sbjct: 592 EELLREMKSEGIVPNDSSFCSVIEAMSNLDAKKSD 626



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 57/112 (50%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L G+GK  EA  +   +   G +P  I+Y TL++  +++   K    +  ++   G 
Sbjct: 509 MRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGF 568

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNV 112
            P  + +NA++   S++   + A ++ ++MK  G  P  S++ ++I+   N+
Sbjct: 569 NPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 214/462 (46%), Gaps = 41/462 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N  V +G  H+A  +   ++ +   P + TY  L+    +       L L SK+++ G+
Sbjct: 171 INGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGL 230

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K +  + +A +N    SG ++EA ++  KM   G KP    Y  L+ G+   GK   +L 
Sbjct: 231 KDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALN 290

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAW--CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           L Q M+  KNV  +  T+N+L+       K+  E  ++ + +M   G+ PD  TYNT+  
Sbjct: 291 LAQEMTS-KNVVFDIVTFNVLINCLFKLGKSDTESIYSAMREM---GLSPDLATYNTMLN 346

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL---------- 228
              + G    A ++  EM++ ++ PN  TC I+++G C+ G ME+A+  L          
Sbjct: 347 GNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYP 406

Query: 229 ----YRM------------KELEVHPNLV---------VFNSLIKGFLDIKDSDGVDKAL 263
               YR+              L+ H  LV         V+N LI     +  +      L
Sbjct: 407 TSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVL 466

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             MEE G+  D  T++ ++  +  +  + +    +  M+   + PDI  +++L  G  +A
Sbjct: 467 KDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKA 526

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G   +A+ +L+ ++K G+ PN   + T++ G C     +  + IY +M   G  P  + Y
Sbjct: 527 GLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAY 586

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
             L+  + +  +  +A+EL+  M+ KGV P  +T  ++   W
Sbjct: 587 NMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGW 628



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 110/489 (22%), Positives = 206/489 (42%), Gaps = 72/489 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   GK  EA     C+I  G+   +I  T L+  L +  + K    L   + +  +
Sbjct: 66  LDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNL 125

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I ++A+I+   + G+++ A     +M++  C P   TY++LI GY   G   ++ K
Sbjct: 126 VPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFK 185

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+ M   KN  PN  TY IL+         + A ++  KM   G++ +    +      
Sbjct: 186 VLRKMVH-KNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNM 244

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    AE+++ +M +  ++P+      ++ G+ K G +  A+     M    V  ++
Sbjct: 245 KRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDI 304

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA------WSS------- 287
           V FN LI     +  SD  +   + M E G+ PD+ T++T+++       W+S       
Sbjct: 305 VTFNVLINCLFKLGKSD-TESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNE 363

Query: 288 ----------------------AGLMGKCQEIFDDMVKAGIEP----------------- 308
                                 AG M    +I  +MV  G+ P                 
Sbjct: 364 MKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRR 423

Query: 309 ------------------DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
                             D  V++IL     + G  +KA ++L  M + G+  +   +  
Sbjct: 424 ADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNA 483

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I G+C +  ++RA   Y  M    ++P+++TY  LL G  +A     A++LL  ++++G
Sbjct: 484 LIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRG 543

Query: 411 VRPKKSTIQ 419
           + P   T +
Sbjct: 544 LVPNACTYE 552



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/476 (23%), Positives = 201/476 (42%), Gaps = 64/476 (13%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +   +   G +P L+ YT L+    +  +  S L+L  ++    +  D + F
Sbjct: 248 GRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTF 307

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +IN   + G  D    I+  M++ G  P  +TYNT++ G    G    +L+L   M  
Sbjct: 308 NVLINCLFKLGKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKS 366

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY-------------- 173
            K + PN  T NI++   C    +E A +++ +MV  G+ P + TY              
Sbjct: 367 RKLI-PNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRAD 425

Query: 174 ---------------------NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
                                N L     + G T +A  +L +M+   +  +  T   ++
Sbjct: 426 TILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALI 485

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
            GYC   +++ A      M    V P++  +N L+ G          D  L+ +++ G+ 
Sbjct: 486 HGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLV 545

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           P+  T+ T+M          +C  I+ +MV  G  P    +++L   + + G+ ++A+ +
Sbjct: 546 PNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKEL 605

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           +  M+  GV P    +  +I GWCN +KM                P+L +          
Sbjct: 606 MNEMQTKGVSPTCTTYDILICGWCNLLKM----------------PDLGS---------T 640

Query: 393 AKQPWRAE--ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
            K  +RAE   L   M ++G  P +ST   ++ ++ A G   +A+ +LKS  + ++
Sbjct: 641 LKISYRAEAKRLFIEMNDRGFVPCESTQACISSTFAAPGKKADARMLLKSTYKRKR 696



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 200/446 (44%), Gaps = 14/446 (3%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK  E   +   + + G     ++YT L+ AL +  +    L  ++ +   G   D
Sbjct: 34  LCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFD 93

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I    +I+   +SG + EA  +F  +      P   TY+ LI G   +G    +   L 
Sbjct: 94  VIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDGRCKLGDINGAESALH 153

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M ++K+  PN  TY+ L+  +  +  + +A+ V+ KMV     P+  TY  L     + 
Sbjct: 154 EM-EEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKA 212

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A  +  +M+   ++ N       V+   + G ME+A   + +M    + P+LV +
Sbjct: 213 GWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNY 272

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKP---DVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            +L+ GFL    S  V  AL L +E   K    D+VTF+ +++     G     + I+  
Sbjct: 273 TNLMDGFL---KSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLG-KSDTESIYSA 328

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M + G+ PD+  ++ +  G  + G    A  +   M+   + PN +    +I+G C A +
Sbjct: 329 MREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGR 388

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME---EKGVRPKKST 417
           M+ A+ I ++M  +G+ P   TY  LL     + +  RA+ +LQ  E      ++  K  
Sbjct: 389 MENAIDILKEMVLMGLYPTSTTYRILL---NISSKSRRADTILQTHELLVNMQLKVDKDV 445

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEE 443
             ++  +   +G+ R+A  VLK  EE
Sbjct: 446 YNILISNLCKLGMTRKATAVLKDMEE 471



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 144/317 (45%), Gaps = 35/317 (11%)

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ------NNQ- 200
           +N +EEA  +  +MV SGI PD VT+ ++     ++G+    + +L EM       NN  
Sbjct: 2   QNGLEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVS 61

Query: 201 -------------------------VRPNER---TCGIIVSGYCKEGNMEDAMRFLYRMK 232
                                    VR N      C +++ G  K G +++A      + 
Sbjct: 62  YTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLY 121

Query: 233 ELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMG 292
           +L + PN + +++LI G   + D +G + AL  MEE    P+V+T+S++++ +   GL+ 
Sbjct: 122 QLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLH 181

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
              ++   MV     P+I  ++IL  G  +AG    A  + + M++ G+  NV +    +
Sbjct: 182 DAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFV 241

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
           +    + +M+ A  +  KM   G+ P+L  Y  L+ G+ ++ +   A  L Q M  K V 
Sbjct: 242 NNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVV 301

Query: 413 PKKSTIQLVADSWRAIG 429
               T  ++ +    +G
Sbjct: 302 FDIVTFNVLINCLFKLG 318



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 4/117 (3%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N+L+G     G  HEA  + + + + G  P   TY TL+    + +  K  L +  ++  
Sbjct: 517 NLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVI 576

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK 114
            G  P    +N +I   S+ G + +A ++  +M+  G  PT +TY+ LI G+ N+ K
Sbjct: 577 KGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNLLK 633



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 36/189 (19%)

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN------------ 344
           ++++MV +GI PD+  F  +  G  + G+  + + +L  M K G++ N            
Sbjct: 11  LYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALF 70

Query: 345 -----------------------VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
                                  V+  T +I G   + +++ A  ++  + ++ + PN  
Sbjct: 71  KAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYI 130

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY  L+ G  +      AE  L  MEEK   P   T   + + +   GL  +A +VL+  
Sbjct: 131 TYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKM 190

Query: 442 EEDRQSMPN 450
              + +MPN
Sbjct: 191 VH-KNAMPN 198


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 179/363 (49%), Gaps = 2/363 (0%)

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           + +N +I A    G ++EA +I   M D G KP+  TYN +I G    G+   +  +L  
Sbjct: 2   VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M  +  + P+  TYN L+   C +++  EA  +  +M+  G+ PD V++++L   +++  
Sbjct: 62  M-LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
              +A     +M+   + P+     +++ GYC+ GNM +A++    M E     +++ +N
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +++ G    K     DK    M E G  PD  TF+T++      G M K   +F  M + 
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
            I+PDI  ++ L  G+ + GE +KA  +   M    + PN + +  +I+ +C+   +  A
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK-STIQLVAD 423
             +++ M E GI P L T  T++ GY  +    +A+E L  M  KGV P   S   L+ D
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIND 360

Query: 424 SWR 426
             R
Sbjct: 361 GKR 363



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 168/338 (49%), Gaps = 1/338 (0%)

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
           TYNTLI  Y   G  EE+ +++  M+ DK +KP+  TYN ++   C K     A  ++ +
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMA-DKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           M+  G+ PD  TYNTL     +      A+++  EM    V P+  +   +++ + +  +
Sbjct: 62  MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           ++ A+ +   MK+  + P+ V++  L+ G+    +     K    M E G   DV+ ++T
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           I++      ++    ++FD+MV+ G  PD + F+ L  G+ + G   KA S+  +M +  
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 241

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
           + P++V + T+I G+C   +M++A  +++ M    I PN  TY  L+  Y        A 
Sbjct: 242 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 301

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            L  VM EKG++P   T   V   +   G + +A   L
Sbjct: 302 RLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFL 339



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 180/356 (50%), Gaps = 5/356 (1%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N L+G    +G   EA  I N + ++G +P+L TY  ++  L ++ R+     ++ ++  
Sbjct: 5   NTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLN 64

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+ PD+  +N ++       N  EA +IF +M   G  P   ++++L+  +      ++
Sbjct: 65  IGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQ 124

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +L   + M +   V P++  Y +L+  +C   ++ EA  +  +M+  G   D + YNT+ 
Sbjct: 125 ALVYFRDMKKFGLV-PDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTIL 183

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               +      A+++  EM      P+  T   ++ G+C++GNM  A+     M +  + 
Sbjct: 184 NGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIK 243

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P++V +N+LI GF  + + +   +    M    + P+ +T+  +++A+ S G + +   +
Sbjct: 244 PDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRL 303

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
           +D M++ GI+P +   + + KGY R+G+  KA+  L  M   GV P+ + + T+I+
Sbjct: 304 WDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 169/363 (46%), Gaps = 9/363 (2%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
           ++TY TL+ A  R+   +    +++ +   G+KP    +NA+IN   + G    A  I  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
           +M + G  P T+TYNTL+          E+ ++   M + + V P+  +++ L+  +   
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLR-QGVVPDLVSFSSLMAVFSRN 119

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
             +++A      M   G+ PD V Y  L   Y + G    A ++  EM       +    
Sbjct: 120 RHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAY 179

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG-VDKALTL-- 265
             I++G CKE  + DA +    M E    P+   F +LI G       DG + KAL+L  
Sbjct: 180 NTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHC----QDGNMTKALSLFG 235

Query: 266 -MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M +  +KPD+V ++T++D +   G M K  E++D M+   I P+   + IL   Y   G
Sbjct: 236 TMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVG 295

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
              +A  +   M + G+ P +V   TVI G+C +    +A     +M   G+ P+  +Y 
Sbjct: 296 HVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYN 355

Query: 385 TLL 387
           TL+
Sbjct: 356 TLI 358



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 141/309 (45%), Gaps = 1/309 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  KG+   A  I   ++  G  P   TY TL+    R+  F     +  ++ + G+
Sbjct: 43  INGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGV 102

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + F++++   S + ++D+A+  F+ MK  G  P    Y  L+ GY   G   E+LK
Sbjct: 103 VPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALK 162

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M +   V  +   YN ++   C +  + +A  +  +MV  G  PD  T+ TL   +
Sbjct: 163 IRDEMLEQGCV-LDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGH 221

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G   +A  +   M    ++P+      ++ G+CK G ME A      M   ++ PN 
Sbjct: 222 CQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNH 281

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           + +  LI  +  +       +   +M E G+KP +VT +T++  +  +G   K  E    
Sbjct: 282 ITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGR 341

Query: 301 MVKAGIEPD 309
           M+  G+ PD
Sbjct: 342 MIAKGVAPD 350



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/163 (21%), Positives = 78/163 (47%)

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           +VT++T++ A+   GL+ +  EI + M   G++P +  ++ +  G  + G   +A+ IL 
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
            M   G+ P+   + T++   C       A  I+ +M   G+ P+L ++ +L+  +   +
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
              +A    + M++ G+ P      ++   +   G   EA ++
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKI 163



 Score = 40.4 bits (93), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 36/72 (50%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N     G   EA  +++ +IE+G +PTL+T  T++    R          + ++   G+
Sbjct: 288 INAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGV 347

Query: 61  KPDSILFNAMIN 72
            PD I +N +IN
Sbjct: 348 APDHISYNTLIN 359


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 206/452 (45%), Gaps = 35/452 (7%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L  KGK +EA  +   +   G  P   T+  LV+   +    K    +I  + ++ +
Sbjct: 90  LDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNV 149

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +  +I    + G +DEA ++  +M++    P   TYN LI G        +  +
Sbjct: 150 LPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFE 209

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L+  M + K VKPN  TYN++V+ +  +  ++ A N + KM  SG  PD VT+NTL+  Y
Sbjct: 210 LIDEM-EGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGY 268

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY----------- 229
            + G    A +M+ EM    ++ N  T   I+   C E  ++DA + L            
Sbjct: 269 CKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDE 328

Query: 230 --------------------RMKELEVHPNLVVFNSLIKGFLDIKDSD-GVDKALTLMEE 268
                                MKE E+ P+++ + ++I G      +D  +DK   L+E 
Sbjct: 329 VSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLES 388

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G+ PD  T++TI+  +   G + K     + MVK   +PD+   +IL +G    G   K
Sbjct: 389 -GLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDK 447

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  +  +    G   + V F T+ISG C   + + A  +  +M E  + P+  T+  +L 
Sbjct: 448 ALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILS 507

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
              +A +   AEE +  + E+G + +  TI L
Sbjct: 508 ALADAGRMKEAEEFMSGIVEQG-KLQDQTISL 538



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 210/428 (49%), Gaps = 11/428 (2%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           IF+ +I+ G      T+  L+     + +    + LI K++     PD++ +N +++   
Sbjct: 35  IFSDVIKLGVEVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLC 94

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G ++EA  +   MK++G  P  +T+N L+ GY  +G  +E+ +++ +M+++ NV P+ 
Sbjct: 95  KKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARN-NVLPDV 153

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           RTY  L+   C    I+EA+ +  +M    + P  VTYN L     +   + +  +++ E
Sbjct: 154 RTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDE 213

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M+   V+PN  T  ++V  Y KEG M++A   L +M+E    P+ V FN+L  G+     
Sbjct: 214 MEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYC---K 270

Query: 256 SDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +  + +A  +M+E    G+K + VT +TI+        +    ++     K G   D   
Sbjct: 271 AGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVS 330

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           +  L  GY + G+    +     M++  + P+++ + T+I G C + K  +++    ++ 
Sbjct: 331 YGTLIMGYFKVGKSXXWD----EMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELL 386

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
           E G+ P+  TY T++ GY    Q  +A      M +K  +P   T  ++       G+  
Sbjct: 387 ESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLD 446

Query: 433 EAKRVLKS 440
           +A ++ K+
Sbjct: 447 KALKLFKT 454



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 172/357 (48%), Gaps = 8/357 (2%)

Query: 60  MKPDSILFNAMINAC---SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           +KP+ +  N +I A        +V  +  IF  +   G +  T+T+N LI G     K  
Sbjct: 6   LKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLS 65

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           E++ L+  M    +  P++ +YN ++   C K  + EA +++  M  +G+ P+  T+N L
Sbjct: 66  EAIGLIGKMKH-FSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNIL 124

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
              Y + G    A +++  M  N V P+ RT   ++ G CK+G +++A R    M+ L++
Sbjct: 125 VSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKL 184

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P++V +N LI G  +   S    + +  ME  GVKP+ VT++ ++  +   G M     
Sbjct: 185 LPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGN 244

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
               M ++G  PD   F+ L+ GY +AG   +A  ++  M + G+  N V   T++   C
Sbjct: 245 ELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLC 304

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
              K+  A  +     + G   +  +Y TL+ GY +  +    +E    M+EK + P
Sbjct: 305 GERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDE----MKEKEIIP 357



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 165/329 (50%), Gaps = 14/329 (4%)

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEE-SLKLLQLMSQD---KNVKPNDRTYNILVRAW 145
           MK    KP   T NTLIK    V  P + S+ L + +  D     V+ N  T+NIL+   
Sbjct: 1   MKRLHLKPNLLTLNTLIKAL--VRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGC 58

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C +N + EA  ++ KM      PD V+YNT+     + G+   A  +L +M+NN + PN 
Sbjct: 59  CIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNR 118

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG-VDKALT 264
            T  I+VSGYCK G +++A   +  M    V P++  + +LI G       DG +D+A  
Sbjct: 119 NTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLC----KDGKIDEAFR 174

Query: 265 L---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           L   ME   + P VVT++ +++         K  E+ D+M   G++P+   ++++ K YV
Sbjct: 175 LRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYV 234

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           + G+   A + L  M + G  P+ V F T+ +G+C A ++  A  + ++M   G+  N  
Sbjct: 235 KEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSV 294

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           T  T+L      ++   A +LL    ++G
Sbjct: 295 TLNTILHTLCGERKLDDAYKLLSSASKRG 323



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/385 (24%), Positives = 168/385 (43%), Gaps = 17/385 (4%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           V +GK   A      + E G  P  +T+ TL     +  R      ++ ++ + G+K +S
Sbjct: 234 VKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNS 293

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           +  N +++       +D+A K+       G      +Y TLI GY  VGK     ++   
Sbjct: 294 VTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEM--- 350

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
             ++K + P+  TY  ++   C     +++ +   +++ SG+ PD  TYNT+   Y + G
Sbjct: 351 --KEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREG 408

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +  +A     +M     +P+  TC I+V G C EG ++ A++            + V FN
Sbjct: 409 QVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFN 468

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           ++I G  +    +     L  MEE  + PD  T + I+ A + AG M + +E    +V+ 
Sbjct: 469 TIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQ 528

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G   D  +               K ++  +S       PN V F+  I+  C   K + A
Sbjct: 529 GKLQDQTI------------SLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDA 576

Query: 365 MSIYEKMCEIGINPNLKTYETLLWG 389
           M + ++  + GI  +  TY +L+ G
Sbjct: 577 MHMIQESTQKGIILHKSTYISLMEG 601



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 15/249 (6%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK  ++    N L+E G  P   TY T++    R+ +        +K+ K   KPD
Sbjct: 369 LCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPD 428

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
               N ++      G +D+A+K+F+     G      T+NT+I G    G+ EE+  LL 
Sbjct: 429 LFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLA 488

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG-IQPDAVTYNTLARAYAQ 182
            M ++K + P+  T+N ++ A      ++EA   +  +V  G +Q   ++ N        
Sbjct: 489 EM-EEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTISLN-------- 539

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                + +       + +  PN       ++  C +G  +DAM  +    +  +  +   
Sbjct: 540 -----KRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKST 594

Query: 243 FNSLIKGFL 251
           + SL++G +
Sbjct: 595 YISLMEGLI 603


>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g42310, mitochondrial; Flags: Precursor
 gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
 gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 709

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 202/427 (47%), Gaps = 3/427 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L+ +    T +TY  L+ A  R    +  L+LI+K+ +DG + D + ++ +I + + S  
Sbjct: 188 LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNK 247

Query: 80  VDEAM--KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT 137
           +D  M  +++++++    +      N +I G+   G P ++L+LL  M+Q   +     T
Sbjct: 248 IDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLG-MAQATGLSAKTAT 306

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
              ++ A        EA  +  ++  SGI+P    YN L + Y + G    AE M+ EM+
Sbjct: 307 LVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEME 366

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
              V P+E T  +++  Y   G  E A   L  M+  +V PN  VF+ L+ GF D  +  
Sbjct: 367 KRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQ 426

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
              + L  M+  GVKPD   ++ ++D +     +      FD M+  GIEPD   ++ L 
Sbjct: 427 KTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI 486

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
             + + G    AE +  +M + G  P    +  +I+ + +  +      +  KM   GI 
Sbjct: 487 DCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL 546

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           PN+ T+ TL+  YG++ +   A E L+ M+  G++P  +    + +++   GL+ +A   
Sbjct: 547 PNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNA 606

Query: 438 LKSAEED 444
            +    D
Sbjct: 607 FRVMTSD 613



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 197/399 (49%), Gaps = 1/399 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  EA  +F  L + G +P    Y  L+    +    K   S++S++EK G+
Sbjct: 311 ISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGV 370

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   ++ +I+A   +G  + A  + ++M+    +P +  ++ L+ G+ + G+ +++ +
Sbjct: 371 SPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQ 430

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+ M +   VKP+ + YN+++  +   N ++ A     +M++ GI+PD VT+NTL   +
Sbjct: 431 VLKEM-KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 489

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            ++G    AE+M   M+     P   T  I+++ Y  +   +D  R L +MK   + PN+
Sbjct: 490 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 549

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V   +L+  +      +   + L  M+  G+KP    ++ +++A++  GL  +    F  
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 609

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G++P +   + L   +       +A ++L  M++ GV P+VV +TT++       K
Sbjct: 610 MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDK 669

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
            Q+   +YE+M   G  P+ K    L       KQ  RA
Sbjct: 670 FQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQTLRA 708



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 191/394 (48%), Gaps = 3/394 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSI--LSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++G++   + Y+ ++ +LTR  +  S+  L L  ++E+D ++ D  L N +I   ++SG+
Sbjct: 225 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 284

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             +A+++    + +G    T+T  ++I    + G+  E+  L + + Q   +KP  R YN
Sbjct: 285 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQ-SGIKPRTRAYN 343

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L++ +     +++A ++V +M   G+ PD  TY+ L  AY   G    A  +L EM+  
Sbjct: 344 ALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG 403

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            V+PN      +++G+   G  +   + L  MK + V P+   +N +I  F      D  
Sbjct: 404 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA 463

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
                 M   G++PD VT++T++D     G     +E+F+ M + G  P    ++I+   
Sbjct: 464 MTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINS 523

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y         + +L  M+  G+ PNVV  TT++  +  + +   A+   E+M  +G+ P+
Sbjct: 524 YGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPS 583

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
              Y  L+  Y +     +A    +VM   G++P
Sbjct: 584 STMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 617



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/317 (19%), Positives = 128/317 (40%), Gaps = 49/317 (15%)

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           Y+IL+ A      + EA+ +  K   +      +TYN L  A A+  +  +A  ++ +M+
Sbjct: 170 YSILIHALGRSEKLYEAFLLSQKQTLT-----PLTYNALIGACARNNDIEKALNLIAKMR 224

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE---VHPNLVVFNSLIKGFLDIK 254
            +  + +     +++    +  N  D++  L   KE+E   +  ++ + N +I GF    
Sbjct: 225 QDGYQSDFVNYSLVIQSLTR-SNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSG 283

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           D     + L + +  G+     T  +I+ A + +G                         
Sbjct: 284 DPSKALQLLGMAQATGLSAKTATLVSIISALADSG------------------------- 318

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
                        +AE++   +R+ G+ P    +  ++ G+     ++ A S+  +M + 
Sbjct: 319 ----------RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR 368

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G++P+  TY  L+  Y  A +   A  +L+ ME   V+P       +   +R  G  ++ 
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKT 428

Query: 435 KRVLK-----SAEEDRQ 446
            +VLK       + DRQ
Sbjct: 429 FQVLKEMKSIGVKPDRQ 445


>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Cucumis sativus]
          Length = 683

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 214/462 (46%), Gaps = 41/462 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N  V +G  H+A  +   ++ +   P + TY  L+    +       L L SK+++ G+
Sbjct: 157 INGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGL 216

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K +  + +A +N    SG ++EA ++  KM   G KP    Y  L+ G+   GK   +L 
Sbjct: 217 KDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALN 276

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAW--CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           L Q M+  KNV  +  T+N+L+       K+  E  ++ + +M   G+ PD  TYNT+  
Sbjct: 277 LAQEMTS-KNVVFDIVTFNVLINCLFKLGKSDTESIYSAMREM---GLSPDLATYNTMLN 332

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL---------- 228
              + G    A ++  EM++ ++ PN  TC I+++G C+ G ME+A+  L          
Sbjct: 333 GNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYP 392

Query: 229 ----YRM------------KELEVHPNLV---------VFNSLIKGFLDIKDSDGVDKAL 263
               YR+              L+ H  LV         V+N LI     +  +      L
Sbjct: 393 TSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVL 452

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             MEE G+  D  T++ ++  +  +  + +    +  M+   + PDI  +++L  G  +A
Sbjct: 453 KDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKA 512

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G   +A+ +L+ ++K G+ PN   + T++ G C     +  + IY +M   G  P  + Y
Sbjct: 513 GLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAY 572

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
             L+  + +  +  +A+EL+  M+ KGV P  +T  ++   W
Sbjct: 573 NMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGW 614



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 110/489 (22%), Positives = 207/489 (42%), Gaps = 72/489 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   GK  EA     C+I  G+   +I  T L+  L +  + K    L   + +  +
Sbjct: 52  LDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNL 111

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I ++A+I++  + G+++ A     +M++  C P   TY++LI GY   G   ++ K
Sbjct: 112 VPNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFK 171

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+ M   KN  PN  TY IL+         + A ++  KM   G++ +    +      
Sbjct: 172 VLRKMVH-KNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNM 230

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    AE+++ +M +  ++P+      ++ G+ K G +  A+     M    V  ++
Sbjct: 231 KRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDI 290

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA------WSS------- 287
           V FN LI     +  SD  +   + M E G+ PD+ T++T+++       W+S       
Sbjct: 291 VTFNVLINCLFKLGKSD-TESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNE 349

Query: 288 ----------------------AGLMGKCQEIFDDMVKAGIEP----------------- 308
                                 AG M    +I  +MV  G+ P                 
Sbjct: 350 MKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRR 409

Query: 309 ------------------DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
                             D  V++IL     + G  +KA ++L  M + G+  +   +  
Sbjct: 410 ADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNA 469

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I G+C +  ++RA   Y  M    ++P+++TY  LL G  +A     A++LL  ++++G
Sbjct: 470 LIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRG 529

Query: 411 VRPKKSTIQ 419
           + P   T +
Sbjct: 530 LVPNACTYE 538



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 110/476 (23%), Positives = 201/476 (42%), Gaps = 64/476 (13%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +   +   G +P L+ YT L+    +  +  S L+L  ++    +  D + F
Sbjct: 234 GRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTF 293

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +IN   + G  D    I+  M++ G  P  +TYNT++ G    G    +L+L   M  
Sbjct: 294 NVLINCLFKLGKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKS 352

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY-------------- 173
            K + PN  T NI++   C    +E A +++ +MV  G+ P + TY              
Sbjct: 353 RKLI-PNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRAD 411

Query: 174 ---------------------NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
                                N L     + G T +A  +L +M+   +  +  T   ++
Sbjct: 412 TILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALI 471

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
            GYC   +++ A      M    V P++  +N L+ G          D  L+ +++ G+ 
Sbjct: 472 HGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLV 531

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           P+  T+ T+M          +C  I+ +MV  G  P    +++L   + + G+ ++A+ +
Sbjct: 532 PNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKEL 591

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           +  M+  GV P    +  +I GWCN +KM                P+L +          
Sbjct: 592 MNEMQTKGVSPTCTTYDILICGWCNLLKM----------------PDLGS---------T 626

Query: 393 AKQPWRAE--ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
            K  +RAE   L   M ++G  P +ST   ++ ++ A G   +A+ +LKS  + ++
Sbjct: 627 LKISYRAEAKRLFIEMNDRGFVPCESTQACISSTFAAPGKKADARMLLKSTYKRKR 682



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/446 (24%), Positives = 199/446 (44%), Gaps = 14/446 (3%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK  E   +   + + G     ++YT L+ AL +  +    L  ++ +   G   D
Sbjct: 20  LCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFD 79

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I    +I+   +SG + EA  +F  +      P   TY+ LI     +G    +   L 
Sbjct: 80  VIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSRCKLGDINGAESALH 139

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M ++K+  PN  TY+ L+  +  +  + +A+ V+ KMV     P+  TY  L     + 
Sbjct: 140 EM-EEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKA 198

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A  +  +M+   ++ N       V+   + G ME+A   + +M    + P+LV +
Sbjct: 199 GWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNY 258

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKP---DVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            +L+ GFL    S  V  AL L +E   K    D+VTF+ +++     G     + I+  
Sbjct: 259 TNLMDGFL---KSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLG-KSDTESIYSA 314

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M + G+ PD+  ++ +  G  + G    A  +   M+   + PN +    +I+G C A +
Sbjct: 315 MREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGR 374

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME---EKGVRPKKST 417
           M+ A+ I ++M  +G+ P   TY  LL     + +  RA+ +LQ  E      ++  K  
Sbjct: 375 MENAIDILKEMVLMGLYPTSTTYRILL---NISSKSRRADTILQTHELLVNMQLKVDKDV 431

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEE 443
             ++  +   +G+ R+A  VLK  EE
Sbjct: 432 YNILISNLCKLGMTRKATAVLKDMEE 457



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 137/297 (46%)

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+  T+  ++   C    + E   ++ +M   G+  + V+Y  L  A  + G+   A   
Sbjct: 8   PDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMT 67

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           L  M       +   C +++ G  K G +++A      + +L + PN + +++LI     
Sbjct: 68  LACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSRCK 127

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           + D +G + AL  MEE    P+V+T+S++++ +   GL+    ++   MV     P+I  
Sbjct: 128 LGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICT 187

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++IL  G  +AG    A  + + M++ G+  NV +    ++    + +M+ A  +  KM 
Sbjct: 188 YAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMA 247

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
             G+ P+L  Y  L+ G+ ++ +   A  L Q M  K V     T  ++ +    +G
Sbjct: 248 SGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLG 304



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 4/117 (3%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N+L+G     G  HEA  + + + + G  P   TY TL+    + +  K  L +  ++  
Sbjct: 503 NLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVI 562

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK 114
            G  P    +N +I   S+ G + +A ++  +M+  G  PT +TY+ LI G+ N+ K
Sbjct: 563 KGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNLLK 619



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 1/150 (0%)

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MV +GI PD+  F  +  G  + G+  + + +L  M K G++ N V +T ++     A K
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A+     M   G N ++     L+ G  ++ Q   AE L   + +  + P   T   
Sbjct: 61  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           + DS   +G    A+  L   EE +  +PN
Sbjct: 121 LIDSRCKLGDINGAESALHEMEE-KDCVPN 149


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/430 (22%), Positives = 201/430 (46%), Gaps = 39/430 (9%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G +P+++TYT L+ A+ +   F   ++++ ++   G  P+ + +N +IN     G 
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 80  VDEAMKI-----------------------------------FQKMKDSGCKPTTSTYNT 104
           VD+A +I                                   F +M D  C P   T++ 
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 105 LIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS 164
           L++ +   G  E ++++LQ MSQ     PN    NI++ A C +  +++A++ +  M   
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQ-HGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMY 356

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           G  PD ++Y T+ R   + G    A+++L EM      PNE T    +   C++G +E A
Sbjct: 357 GCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQA 416

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
           ++ +  M E      +V +N+L+ GF        VD AL L      +P+ +T++T++  
Sbjct: 417 IKLIELMPEYGCSVGIVTYNALVHGFC---VQGRVDSALELFNNLPCEPNTITYTTLLTG 473

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
              A  +    E+  +M++     +   F++L   + + G  ++A  ++  M ++G  PN
Sbjct: 474 LCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPN 533

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
           ++ F T++ G       + A+ +   +   G++ +  TY +++       +   A ++L 
Sbjct: 534 LITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLH 593

Query: 405 VMEEKGVRPK 414
            +++ G+RPK
Sbjct: 594 AVQDMGMRPK 603



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 109/449 (24%), Positives = 191/449 (42%), Gaps = 39/449 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSI------------ 48
           +N +  +G+  +A  I N L   G +P +++YTT++  L   +R+  +            
Sbjct: 229 INGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKC 288

Query: 49  -----------------------LSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
                                  + ++ ++ + G  P++ L N +INA  + G VD+A  
Sbjct: 289 VPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYD 348

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
               M   GC P T +Y T+++G    G+ E + +LL  M + KN  PN+ T+N  +   
Sbjct: 349 FLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVR-KNCPPNEVTFNTFICIL 407

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C K  IE+A  ++  M   G     VTYN L   +   G   R +  L    N    PN 
Sbjct: 408 CQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQG---RVDSALELFNNLPCEPNT 464

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   +++G C    ++ A   L  M + +   N V FN L+  F      +   + +  
Sbjct: 465 ITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQ 524

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M E G  P+++TF+T++D  +      +  E+   +V  G+  D   +S +     R   
Sbjct: 525 MMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDR 584

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            ++A  +L +++  G+ P V M+  ++   C   +  +A+  +  M   G  PN  TY  
Sbjct: 585 TEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYII 644

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
           L+ G         A  +L  +  KGV  K
Sbjct: 645 LIEGLAHEGLLKEARYVLSELYAKGVLSK 673



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/355 (24%), Positives = 163/355 (45%), Gaps = 6/355 (1%)

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M   GC+P+  TY  L++         E++ +L  M + K   PN  TYN+++   C + 
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEM-RAKGCTPNIVTYNVIINGMCREG 236

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            +++A  ++ ++ + G QPD V+Y T+ +           + +  EM + +  PNE T  
Sbjct: 237 RVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFD 296

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
           ++V  +C+ G +E A++ L +M +    PN  + N +I         D     L  M  +
Sbjct: 297 MLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMY 356

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G  PD ++++T++     AG     +E+  +MV+    P+   F+       + G  ++A
Sbjct: 357 GCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQA 416

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM-CEIGINPNLKTYETLLW 388
             ++  M +YG    +V +  ++ G+C   ++  A+ ++  + CE    PN  TY TLL 
Sbjct: 417 IKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE----PNTITYTTLLT 472

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           G   A++   A ELL  M +K       T  ++   +   G   EA  ++    E
Sbjct: 473 GLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMME 527



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 5/137 (3%)

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
           + G     E     S  ++M + G  P+VV +T ++   C +     AM++ ++M   G 
Sbjct: 159 SSGASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGC 218

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR--EA 434
            PN+ TY  ++ G     +   A+E+L  +   G +P   +   V    + +  AR  + 
Sbjct: 219 TPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTV---LKGLCAARRWDD 275

Query: 435 KRVLKSAEEDRQSMPNK 451
            +VL +   D++ +PN+
Sbjct: 276 VKVLFAEMVDKKCVPNE 292


>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 805

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 210/427 (49%), Gaps = 10/427 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA    + +I +G  P   TY T++ A     +    L+L  +++K+G  P +  +
Sbjct: 338 GFYQEAAKCIDTMIGKGLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTY 397

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++    +       +++  +M  SGC P   T+NTL+   G  G      ++L+ M  
Sbjct: 398 NLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKS 457

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K V+    TYN L+ A+    S   A+ +  +M A+G  P   TYN L    ++ G+  
Sbjct: 458 CK-VELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWT 516

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  ++ +M++   +PN+ +  +++  + K GN          + +  + P+ V+  +L+
Sbjct: 517 AARSIVSKMKSEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYQGNIFPSWVILRTLV 576

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
                 +  +G+++A   ++  G KPD+V  ++++  ++  GL  K  E+F+ + + G+ 
Sbjct: 577 IANFKCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLS 636

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMR---------KYGVHPNVVMFTTVISGWCNA 358
           PD+  ++ L   Y ++ EP +AE IL  +R         +  + P+VV + TVI+G+C  
Sbjct: 637 PDLITYNSLMDMYAKSNEPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSYNTVINGFCKE 696

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
             ++ A  +  +M   G+ P + TY TL+ GY   +    A E++  M ++ ++P + T 
Sbjct: 697 GLIKEAQRVLSEMIADGVAPCVITYHTLVGGYASREMFAEAREVVGYMIQRKLKPMELTY 756

Query: 419 QLVADSW 425
           + V DS+
Sbjct: 757 RRVVDSY 763



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/440 (24%), Positives = 205/440 (46%), Gaps = 10/440 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA   F  L   GH P ++TY  L+    +   +   L ++ ++E  G KPD++ +
Sbjct: 268 GLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLREMEDAGCKPDAVTY 327

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +  + + +G   EA K    M   G  P T TYNT++  YGN GK +E+L L   M +
Sbjct: 328 NELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKK 387

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  + P   TYN+++     K+       ++ +M  SG  P+ VT+NTL     + G   
Sbjct: 388 NGFI-PYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLLAVCGKRGMES 446

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
              ++L  M++ +V     T   ++  Y + G+  +A +    M      P L  +N+L+
Sbjct: 447 YVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALL 506

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
                  D       ++ M+  G KP+ +++S ++   +  G     + I  ++ +  I 
Sbjct: 507 NVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYQGNIF 566

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P   +   L     +    +  E     ++  G  P++V+  +++S +       +AM +
Sbjct: 567 PSWVILRTLVIANFKCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEM 626

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME---------EKGVRPKKSTI 418
           +E + ++G++P+L TY +L+  Y ++ +PW AE++L  +          ++ ++P   + 
Sbjct: 627 FESIEQLGLSPDLITYNSLMDMYAKSNEPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSY 686

Query: 419 QLVADSWRAIGLAREAKRVL 438
             V + +   GL +EA+RVL
Sbjct: 687 NTVINGFCKEGLIKEAQRVL 706



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 107/444 (24%), Positives = 203/444 (45%), Gaps = 2/444 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDG 59
           ++ L  +G+   A  +F+ L  EG  PT +TY  ++    R  R +  +++L++ +   G
Sbjct: 190 LHALSREGRYERALRLFDELRREGVAPTRVTYNVVLDVYGRMGRSWPRVVALLADMRAAG 249

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           ++PD    + +I A    G VDEA+  F+ +K  G  P   TYN L++ +G  G   E+L
Sbjct: 250 VEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEAL 309

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           ++L+ M +D   KP+  TYN L  ++      +EA   +  M+  G+ P+  TYNT+  A
Sbjct: 310 RVLREM-EDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTA 368

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           Y   G+   A  +   M+ N   P   T  +++    K+      +  L  M      PN
Sbjct: 369 YGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPN 428

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            V +N+L+           V + L  M+   V+    T++T++ A+   G      +++D
Sbjct: 429 RVTWNTLLAVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYD 488

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M  AG  P +  ++ L     R G+   A SI++ M+  G  PN + ++ ++       
Sbjct: 489 EMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCHAKGG 548

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
                 +I +++ +  I P+     TL+    + ++    E   Q ++ +G +P    + 
Sbjct: 549 NAAGIEAIEKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKARGHKPDLVILN 608

Query: 420 LVADSWRAIGLAREAKRVLKSAEE 443
            +   +   GL  +A  + +S E+
Sbjct: 609 SMLSIYAKNGLYSKAMEMFESIEQ 632



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/423 (21%), Positives = 181/423 (42%), Gaps = 45/423 (10%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA  +F+ + + G  P   TY  ++  L ++ RF ++L ++ ++ + G  P+ + +
Sbjct: 373 GKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTW 432

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N ++  C + G      ++ + MK    +    TYNTLI  YG  G    + K+   M+ 
Sbjct: 433 NTLLAVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTA 492

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG--- 184
                P   TYN L+     +     A ++V KM + G +P+ ++Y+ L + +A+ G   
Sbjct: 493 -AGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCHAKGGNAA 551

Query: 185 -------ETYRA-------------------------EQMLFEMQNNQVRPNERTCGIIV 212
                  E Y+                          E+   E++    +P+      ++
Sbjct: 552 GIEAIEKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKARGHKPDLVILNSML 611

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG-- 270
           S Y K G    AM     +++L + P+L+ +NSL+  +    +    +K L  +      
Sbjct: 612 SIYAKNGLYSKAMEMFESIEQLGLSPDLITYNSLMDMYAKSNEPWEAEKILNRLRSSQSQ 671

Query: 271 -------VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
                  +KPDVV+++T+++ +   GL+ + Q +  +M+  G+ P +  +  L  GY   
Sbjct: 672 QQQQQQQLKPDVVSYNTVINGFCKEGLIKEAQRVLSEMIADGVAPCVITYHTLVGGYASR 731

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
               +A  ++  M +  + P  + +  V+  +C A + + A      + E   N + K  
Sbjct: 732 EMFAEAREVVGYMIQRKLKPMELTYRRVVDSYCRAKRYEDARDFLAVVAEADTNSDEKLL 791

Query: 384 ETL 386
             L
Sbjct: 792 GAL 794



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/320 (21%), Positives = 147/320 (45%), Gaps = 1/320 (0%)

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           +++ A   SG+ + A+ + +  +  G     + +  +++  G  G+ +    LL  M   
Sbjct: 117 SLLKALELSGHWEWALALLRWARAEGAADGPAPFEMVVRALGREGRHDAVCALLDEMPLP 176

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY- 187
              + + R Y  ++ A   +   E A  +  ++   G+ P  VTYN +   Y + G ++ 
Sbjct: 177 PGARLDVRAYTTVLHALSREGRYERALRLFDELRREGVAPTRVTYNVVLDVYGRMGRSWP 236

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           R   +L +M+   V P+  T   +++   ++G +++A+ F   +K     P +V +N+L+
Sbjct: 237 RVVALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALL 296

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           + F    +     + L  ME+ G KPD VT++ +  +++ AG   +  +  D M+  G+ 
Sbjct: 297 QVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLL 356

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P+   ++ +   Y  AG+  +A ++   M+K G  P    +  V+       +    + +
Sbjct: 357 PNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEM 416

Query: 368 YEKMCEIGINPNLKTYETLL 387
             +M   G  PN  T+ TLL
Sbjct: 417 LGEMSRSGCTPNRVTWNTLL 436



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/394 (21%), Positives = 174/394 (44%), Gaps = 7/394 (1%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVE-KDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           +  +V AL R+ R  ++ +L+ ++    G + D   +  +++A S  G  + A+++F ++
Sbjct: 150 FEMVVRALGREGRHDAVCALLDEMPLPPGARLDVRAYTTVLHALSREGRYERALRLFDEL 209

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
           +  G  PT  TYN ++  YG +G+    +  L    +   V+P+  T + ++ A      
Sbjct: 210 RREGVAPTRVTYNVVLDVYGRMGRSWPRVVALLADMRAAGVEPDGFTASTVIAAAGRDGL 269

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           ++EA      + A G  P  VTYN L + + + G    A ++L EM++   +P+  T   
Sbjct: 270 VDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNE 329

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---ME 267
           +   Y + G  ++A + +  M    + PN   +N+++  +    ++  VD+AL L   M+
Sbjct: 330 LAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTAY---GNAGKVDEALALFDRMK 386

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
           + G  P   T++ ++             E+  +M ++G  P+   ++ L     + G   
Sbjct: 387 KNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLLAVCGKRGMES 446

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
               +L  M+   V      + T+I  +        A  +Y++M   G  P L TY  LL
Sbjct: 447 YVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALL 506

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
                      A  ++  M+ +G +P   +  L+
Sbjct: 507 NVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLL 540



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 5/186 (2%)

Query: 260 DKALTLMEEFGVKP----DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
           D    L++E  + P    DV  ++T++ A S  G   +   +FD++ + G+ P    +++
Sbjct: 164 DAVCALLDEMPLPPGARLDVRAYTTVLHALSREGRYERALRLFDELRREGVAPTRVTYNV 223

Query: 316 LAKGYVRAGEP-QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
           +   Y R G    +  ++L  MR  GV P+    +TVI+       +  A++ +E +   
Sbjct: 224 VLDVYGRMGRSWPRVVALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKAR 283

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G  P + TY  LL  +G+A     A  +L+ ME+ G +P   T   +A S+   G  +EA
Sbjct: 284 GHAPCVVTYNALLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEA 343

Query: 435 KRVLKS 440
            + + +
Sbjct: 344 AKCIDT 349



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 10/199 (5%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           GH+P L+   ++++   +   +   + +   +E+ G+ PD I +N++++  ++S    EA
Sbjct: 599 GHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPDLITYNSLMDMYAKSNEPWEA 658

Query: 84  MKIFQKMKDSG---------CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
            KI  +++ S           KP   +YNT+I G+   G  +E+ ++L  M  D  V P 
Sbjct: 659 EKILNRLRSSQSQQQQQQQQLKPDVVSYNTVINGFCKEGLIKEAQRVLSEMIAD-GVAPC 717

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
             TY+ LV  + S+    EA  VV  M+   ++P  +TY  +  +Y +      A   L 
Sbjct: 718 VITYHTLVGGYASREMFAEAREVVGYMIQRKLKPMELTYRRVVDSYCRAKRYEDARDFLA 777

Query: 195 EMQNNQVRPNERTCGIIVS 213
            +       +E+  G + +
Sbjct: 778 VVAEADTNSDEKLLGALTA 796


>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g16010-like [Cucumis sativus]
          Length = 637

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 204/410 (49%), Gaps = 3/410 (0%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGH-RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK 61
           +L+ +G   + H ++N +  EG+  P  ITY+ L++A  + +R+     L  +++++G+ 
Sbjct: 203 MLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLH 262

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P   ++  ++    +   V+ A+++ ++MK  GC PT  TY  LIKG G VG+ +++  L
Sbjct: 263 PTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSL 322

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
              M +D   KP+    N L+        +E+A  +  KM +    P+ VTYNT+ +A  
Sbjct: 323 FFNMLKD-GCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIF 381

Query: 182 QYGETYRAEQMLFE-MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           +         + FE M+ N + P+  T  I++ G+CK   +E A+  L  M E    P  
Sbjct: 382 ESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCP 441

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             + SLI      K  +  ++    ++E   +     ++ ++  + + G +    ++F +
Sbjct: 442 AAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCE 501

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
             K G  PD++ ++ L  G +RAG   +A S++ +MR+ G  P++     +++G      
Sbjct: 502 XEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGG 561

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
            +RA+ ++ KM E  I P+  +Y T+L     A     A +L++ M+ KG
Sbjct: 562 PKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKG 611



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 194/418 (46%), Gaps = 9/418 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDG-MKPDSILFNAMINACSESGNVDEAMK 85
           PT   Y TL+  L  +   + I  L +++  +G   PD+I ++A+I+A  +    D A +
Sbjct: 192 PTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFR 251

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +F +MK++G  PT   Y T++  Y  + K E +L+L++ M + K   P   TY  L++  
Sbjct: 252 LFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEM-KGKGCAPTVFTYTELIKGL 310

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                +++A+++ + M+  G +PD V  N L     + G    A ++  +M + Q  PN 
Sbjct: 311 GKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNV 370

Query: 206 RTCGIIVSG-YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
            T   ++   +  +    +A  +  +MK   + P+   +  LI GF     ++ V+KAL 
Sbjct: 371 VTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCK---TNRVEKALL 427

Query: 265 LMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           L+EE    G  P    + +++D+   A       E+F ++ +        V++++ K + 
Sbjct: 428 LLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFG 487

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
             G    A  +     K G  P+V  +  ++SG   A  +  A S+   M E G  P++K
Sbjct: 488 NCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIK 547

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           ++  +L G  +   P RA E+   M+E  + P   +   +       G+   A ++++
Sbjct: 548 SHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMR 605



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 158/339 (46%), Gaps = 4/339 (1%)

Query: 20  LIEE----GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           L+EE    G  PT+ TYT L+  L +  R     SL   + KDG KPD +L N +IN   
Sbjct: 287 LVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILG 346

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
            +G +++A+K+F KM    C P   TYNT+IK       P     L     +   + P+ 
Sbjct: 347 RAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSS 406

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY IL+  +C  N +E+A  ++ +M   G  P    Y +L  +  +      A ++  E
Sbjct: 407 FTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQE 466

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           ++ N  R + R   +++  +   G + DA+      ++L   P++  +N+L+ G +    
Sbjct: 467 LKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGM 526

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D     +  M E G  PD+ + + I++  +  G   +  E+F  M ++ I PD   ++ 
Sbjct: 527 IDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNT 586

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
           +     RAG  + A  ++  M+  G   + + +++++  
Sbjct: 587 ILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEA 625



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/422 (20%), Positives = 192/422 (45%), Gaps = 6/422 (1%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           ++ ++  L + K     LS+  +++     P + ++N +I      G+ ++  +++ ++ 
Sbjct: 162 WSEILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEIC 221

Query: 92  DSG-CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
             G C P T TY+ LI  +G + + + + +L   M ++  + P ++ Y  ++  +   N 
Sbjct: 222 SEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKEN-GLHPTEKIYTTILAMYFKLNK 280

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           +E A  +V +M   G  P   TY  L +   + G    A  + F M  +  +P+      
Sbjct: 281 VEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINN 340

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL--MEE 268
           +++   + G +EDA++   +M  L+  PN+V +N++IK   + K +   + AL    M+ 
Sbjct: 341 LINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESK-APASEAALWFEKMKA 399

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G+ P   T++ ++D +     + K   + ++M + G  P    +  L     RA   + 
Sbjct: 400 NGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEA 459

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  +   +++     +  ++  +I  + N  ++  A+ ++ +  ++G +P++ TY  L+ 
Sbjct: 460 ANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMS 519

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSM 448
           G   A     A  L++ M E G  P   +  ++ +     G  + A  +    +E  + M
Sbjct: 520 GMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKES-EIM 578

Query: 449 PN 450
           P+
Sbjct: 579 PD 580



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 157/348 (45%), Gaps = 3/348 (0%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           DS  + A+I    ESG VDE  +  Q M  S C    + ++ ++K  G      ++L + 
Sbjct: 123 DSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVF 182

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG-IQPDAVTYNTLARAYA 181
             + + +   P    YN L+     +   E+   +  ++ + G   PD +TY+ L  A+ 
Sbjct: 183 YQI-KGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFG 241

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           +      A ++  EM+ N + P E+    I++ Y K   +E A+R +  MK     P + 
Sbjct: 242 KLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVF 301

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            +  LIKG   +   D        M + G KPDVV  + +++    AG +    ++F  M
Sbjct: 302 TYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM 361

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESI-LTSMRKYGVHPNVVMFTTVISGWCNAVK 360
                 P++  ++ + K    +  P    ++    M+  G+ P+   +  +I G+C   +
Sbjct: 362 DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNR 421

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           +++A+ + E+M E G  P    Y +L+   G AK+   A EL Q ++E
Sbjct: 422 VEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKE 469



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 144/288 (50%), Gaps = 8/288 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSL-ISKVEKDG 59
           +NIL   G+  +A  +F  +      P ++TY T++ A+   K   S  +L   K++ +G
Sbjct: 342 INILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANG 401

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + P S  +  +I+   ++  V++A+ + ++M + G  P  + Y +LI   G   + E + 
Sbjct: 402 IAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAAN 461

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +L Q + ++   + + R Y ++++ + +   + +A ++  +    G  PD  TYN L   
Sbjct: 462 ELFQELKENCG-RSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSG 520

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             + G    A  ++  M+ N   P+ ++  II++G  K G  + A+    +MKE E+ P+
Sbjct: 521 MIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPD 580

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDA 284
            V +N+++     +  +   + A  LM E    G + D +T+S+I++A
Sbjct: 581 AVSYNTILSC---LSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEA 625



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/112 (22%), Positives = 61/112 (54%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ ++  G   EAH +   + E G  P + ++  ++  L +    K  + + +K+++  +
Sbjct: 518 MSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEI 577

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNV 112
            PD++ +N +++  S +G  + A K+ ++MK  G +  + TY+++++  G V
Sbjct: 578 MPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAVGKV 629


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 222/483 (45%), Gaps = 42/483 (8%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +PT++TY T++ +  ++ R    L L+S++++ G  P+ + +N ++N  S+ G +++A
Sbjct: 210 GIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQA 269

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK-------------- 129
             + ++M +SG   +  TYN LI G+   G   E+  L++ M   +              
Sbjct: 270 KGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYG 329

Query: 130 --------------------NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
                                  P+  ++N L+  +C    I EA+ +  ++    + P 
Sbjct: 330 LCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPT 389

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
            +TYNTL      +G    A ++  EM +  + P+  T  I+V+G  K G +  A  F  
Sbjct: 390 VITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFN 449

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWS 286
            M    + P+   +N+ I G + I D+     A ++ EE    G  PDV+T++  + A  
Sbjct: 450 EMLSKGLKPDRFAYNTRIVGEMKIADTS---VAFSMQEEMLAAGFPPDVITYNVFVHALC 506

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
             G   +  ++ ++MV  G+ PD   ++ +  G+V+ G  +KA  +   M   GV P+VV
Sbjct: 507 QQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVV 566

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            +T +I        +  A   + KM E  +  N+ TY  ++ G    ++   A +    M
Sbjct: 567 TYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEM 626

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK-KDEIAVESIHRKQN 465
           EEKG+ P K +  ++ +    +G   EA R+ +    DR+  P+     + ++++HR   
Sbjct: 627 EEKGILPNKFSYTILINESCNMGYWEEALRLYREM-LDRKIQPDSFTHSVFLKNLHRDYQ 685

Query: 466 LSA 468
           + A
Sbjct: 686 VHA 688



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 95/412 (23%), Positives = 195/412 (47%), Gaps = 1/412 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F+ +I  G  P +     ++  L  +       ++   +E+ G+KP  + +N M+++  
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G VD+A+++  +M++ GC P   TYN L+ G    G+ E++  L++ M  +  +  + 
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEM-LNSGLNVSA 285

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TYN L+  +C K    EA+++V +MV     P   TYNTL     ++ +         +
Sbjct: 286 YTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSD 345

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M  ++  P+  +   ++ GYC+ G + +A      +K  ++ P ++ +N+LI G      
Sbjct: 346 MLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGY 405

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D   +    M + G+ PD+ T++ +++     G +   +  F++M+  G++PD   ++ 
Sbjct: 406 LDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNT 465

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
              G ++  +   A S+   M   G  P+V+ +   +   C     + A  + E M   G
Sbjct: 466 RIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDG 525

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           + P+  TY +++ G+ +     +A E+   M  KGV P   T  ++  +  A
Sbjct: 526 LIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAA 577



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 198/442 (44%), Gaps = 18/442 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIE-EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG 59
           ++ILVG    H A+++   ++  E H    +     V  L           +  K+ ++G
Sbjct: 126 LDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGHVXCLL----------VFDKMIRNG 175

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + PD    N ++    +   + +A  ++  M+  G KPT  TYNT++  Y   G+ +++L
Sbjct: 176 LLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQAL 235

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +LL  M Q++   PND TYN+LV     K  +E+A  ++ +M+ SG+   A TYN L   
Sbjct: 236 ELLSEM-QERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLING 294

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + Q G    A  ++ EM N +  P   T   ++ G CK   +         M + +  P+
Sbjct: 295 FCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPD 354

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQE 296
           +V FNSL+ G+     +  + +A  L +E   +   P V+T++T++      G +     
Sbjct: 355 IVSFNSLLYGYC---RTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALR 411

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +  +M   G+ PDI  ++IL  G  + G    A      M   G+ P+   + T I G  
Sbjct: 412 LKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEM 471

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
                  A S+ E+M   G  P++ TY   +    +      A +LL+ M   G+ P   
Sbjct: 472 KIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHV 531

Query: 417 TIQLVADSWRAIGLAREAKRVL 438
           T   + + +   G  R+A+ V 
Sbjct: 532 TYTSIINGFVKNGHLRKAREVF 553



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 36/194 (18%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G  P +ITY   V AL +Q  F+    L+  +  DG+ PD + + ++IN   ++G+
Sbjct: 486 MLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGH 545

Query: 80  VDEAMKIFQKMKDSGCKPTTSTY-----------------------------------NT 104
           + +A ++F +M   G  P+  TY                                   N 
Sbjct: 546 LRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNA 605

Query: 105 LIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS 164
           +I G     + +E+ K    M ++K + PN  +Y IL+   C+    EEA  +  +M+  
Sbjct: 606 IINGLCMTRRMDEAYKYFDEM-EEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDR 664

Query: 165 GIQPDAVTYNTLAR 178
            IQPD+ T++   +
Sbjct: 665 KIQPDSFTHSVFLK 678



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N  V  G   +A  +FN ++ +G  P+++TYT L+ A   ++         SK+ +  +
Sbjct: 537 INGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSV 596

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             + I +NA+IN    +  +DEA K F +M++ G  P   +Y  LI    N+G  EE+L+
Sbjct: 597 PANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALR 656

Query: 121 LLQLMSQDKNVKPNDRTYNILVR 143
           L + M  D+ ++P+  T+++ ++
Sbjct: 657 LYREM-LDRKIQPDSFTHSVFLK 678


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 188/402 (46%), Gaps = 2/402 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G  PT++TY  ++  L R+     + SL+ ++   G+ P+  ++N +INA  +  +  +
Sbjct: 145 KGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQ 204

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A  +  +M  S   P   T+NT+I G+   G   E+LKLL+  +  + ++PN  +Y  L+
Sbjct: 205 ASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLR-EAIRRGLEPNQLSYTPLI 263

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
             +C +     A +++ +M+  G  PD +T   L       G+   A  +  +M   QV 
Sbjct: 264 HGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVM 323

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+     +++SG CK+  +  A   L  M E +V P+  ++ +LI GF+         K 
Sbjct: 324 PDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKI 383

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              MEE    PD+V ++ ++  +   G+M +       M KAG  PD   ++ L  GY +
Sbjct: 384 FEFMEEKAC-PDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAK 442

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G+   +  +L  M K    PN+  + ++I G+CN      A  ++ KM   G+ PN+  
Sbjct: 443 KGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVH 502

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           Y  L+    +  +  +A    + M      P  +T+  + + 
Sbjct: 503 YTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNG 544



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 190/429 (44%), Gaps = 38/429 (8%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L+ EG      T   +V  L  + R +    LI     +G  P ++ +N +I+     G+
Sbjct: 73  LVREGGADDYST-CVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGD 131

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +   + +  +M+  G  PT  TY  +I   G  G   +   LL  M + + + PN + YN
Sbjct: 132 IGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEM-RARGLSPNVQIYN 190

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT------------------------ 175
            ++ A C   S  +A +++ +MV S   PD VT+NT                        
Sbjct: 191 TVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRR 250

Query: 176 -----------LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
                      L   +   GE   A  +L EM      P+  T G ++ G    G + DA
Sbjct: 251 GLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDA 310

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
           +    +M E +V P+  ++N LI G    +        L  M E  V+PD   ++T++D 
Sbjct: 311 LIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDG 370

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           +  +  +   ++IF+ M +    PDI  ++++ KGY + G  ++A + ++SMRK G  P+
Sbjct: 371 FVRSDKLSDARKIFEFMEEKAC-PDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPD 429

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
              +TT++ G+     +  ++ +   M +    PN+ TY +L+ GY      + AE+L  
Sbjct: 430 EFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFA 489

Query: 405 VMEEKGVRP 413
            M+ +G+ P
Sbjct: 490 KMQSEGLFP 498



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/462 (22%), Positives = 197/462 (42%), Gaps = 27/462 (5%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   EA  +    I  G  P  ++YT L+     +        L+ ++   G  PD I 
Sbjct: 234 EGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMIT 293

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
             A+I+    SG V++A+ + +KM +    P  + YN LI G         +  LL+ M 
Sbjct: 294 LGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEML 353

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + K V+P+   Y  L+  +   + + +A  + ++ +     PD V YN + + Y ++G  
Sbjct: 354 EQK-VQPDKFIYTTLIDGFVRSDKLSDARKI-FEFMEEKACPDIVAYNVMIKGYCKFGMM 411

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A   +  M+     P+E T   +V GY K+G++  ++R L  M +    PN+  + SL
Sbjct: 412 KEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASL 471

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G+ +I D+   +     M+  G+ P+VV ++ ++ +      + +    F+ M+    
Sbjct: 472 ICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHC 531

Query: 307 EPDIHVFSILAKGYV---------------RAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            P+      L  G V               +A E      +   +   G+ P +  +  +
Sbjct: 532 PPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAI 591

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP--WRA--------EE 401
           I   C    + +AM + +KM   G  P+  T+ +LL+G+  A +   WR+        +E
Sbjct: 592 IFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGKWRSALPNEFQQDE 651

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
              + +   +  +  T  +V +  R + L  E  + LK  E+
Sbjct: 652 FEIITKYMALFNQHVTSSVVGEVSRILQLYSEEFQFLKQPEQ 693



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 145/310 (46%)

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           +D +  ++VR  C +  +EE   ++      G  P AV YN L   Y + G+  R   +L
Sbjct: 80  DDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLL 139

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
            EM+   + P   T G I+    ++G++      L  M+   + PN+ ++N++I      
Sbjct: 140 GEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKC 199

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
           + +      L  M +    PDVVTF+T++  +   G + +  ++  + ++ G+EP+   +
Sbjct: 200 RSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSY 259

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           + L  G+   GE   A  +L  M   G  P+++    +I G   + ++  A+ + EKM E
Sbjct: 260 TPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAE 319

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
             + P+   Y  L+ G  + +    A+ LL+ M E+ V+P K     + D +       +
Sbjct: 320 RQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSD 379

Query: 434 AKRVLKSAEE 443
           A+++ +  EE
Sbjct: 380 ARKIFEFMEE 389



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 159/340 (46%), Gaps = 8/340 (2%)

Query: 104 TLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVA 163
            +++G    G+ EE   L++    +  V P    YN+L+  +C +  I     ++ +M  
Sbjct: 86  VMVRGLCLEGRVEEGRGLIEARWGEGCV-PGAVFYNVLIDGYCRRGDIGRGLLLLGEMET 144

Query: 164 SGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED 223
            GI P  VTY  +     + G+  + E +L EM+   + PN +    +++  CK  +   
Sbjct: 145 KGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQ 204

Query: 224 AMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFST 280
           A   L +M +   +P++V FN++I GF    D   V +AL L+ E    G++P+ ++++ 
Sbjct: 205 ASDMLNQMVKSRFNPDVVTFNTMIAGFCREGD---VREALKLLREAIRRGLEPNQLSYTP 261

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           ++  +   G      ++  +M+  G  PD+     L  G V +G+   A  +   M +  
Sbjct: 262 LIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQ 321

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
           V P+  ++  +ISG C    +  A ++ E+M E  + P+   Y TL+ G+  + +   A 
Sbjct: 322 VMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDAR 381

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
           ++ + MEEK   P      ++   +   G+ +EA   + S
Sbjct: 382 KIFEFMEEKAC-PDIVAYNVMIKGYCKFGMMKEAVTCMSS 420



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/345 (23%), Positives = 156/345 (45%), Gaps = 17/345 (4%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV  G+ ++A  +   + E    P    Y  L++ L +++   +  +L+ ++ +  ++PD
Sbjct: 301 LVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPD 360

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             ++  +I+    S  + +A KIF+ M++  C P    YN +IKGY   G  +E++  + 
Sbjct: 361 KFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVAYNVMIKGYCKFGMMKEAVTCMS 419

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +   + P++ TY  LV  +  K  I  +  ++  M+    +P+  TY +L   Y   
Sbjct: 420 SMRKAGCI-PDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNI 478

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+TY AE +  +MQ+  + PN     +++    K+  +  A  +   M      PN    
Sbjct: 479 GDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATV 538

Query: 244 NSLIKGFLDIK---------DSDGVDKALTLMEEF------GVKPDVVTFSTIMDAWSSA 288
           + L+ G ++ +         D+    +   L++ F      G+ P +  ++ I+ +    
Sbjct: 539 HYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRH 598

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
            ++GK  ++ D M   G  PD   F  L  G+  AGE  K  S L
Sbjct: 599 NMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGKWRSAL 643



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 138/309 (44%), Gaps = 8/309 (2%)

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           G  PDA   N L R   +     RA  +  EM   +   ++ +  ++V G C EG +E+ 
Sbjct: 41  GALPDAPDCNCLLRLLVERRRWERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEG 100

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTI 281
              +         P  V +N LI G+    D   + + L L   ME  G+ P VVT+  I
Sbjct: 101 RGLIEARWGEGCVPGAVFYNVLIDGYCRRGD---IGRGLLLLGEMETKGIIPTVVTYGAI 157

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +      G + K + +  +M   G+ P++ +++ +     +     +A  +L  M K   
Sbjct: 158 IHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRF 217

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
           +P+VV F T+I+G+C    ++ A+ +  +    G+ PN  +Y  L+ G+    +   A +
Sbjct: 218 NPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASD 277

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK-DEIAVESI 460
           LL  M  +G  P   T+  +       G   +A  +++    +RQ MP+     + +  +
Sbjct: 278 LLVEMMGRGHTPDMITLGALIHGLVVSGQVNDA-LIVREKMAERQVMPDANIYNVLISGL 336

Query: 461 HRKQNLSAS 469
            +K+ LSA+
Sbjct: 337 CKKRMLSAA 345


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 191/393 (48%), Gaps = 1/393 (0%)

Query: 29   LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
            + TY  ++ AL +       L + S++   G+ PD ++++++++     G + EA++ F+
Sbjct: 1085 VFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFK 1144

Query: 89   KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
            +M+  G      TYN+LI G    G  +E    L LM  D+   P+  T+ IL+   C +
Sbjct: 1145 EMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMV-DRGFSPDAFTFTILIDGLCKE 1203

Query: 149  NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
              + EA  ++  M   G +PD +TYNTL       G+   A ++   + +  ++ N  + 
Sbjct: 1204 GKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSY 1263

Query: 209  GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             I+++GYCK+  +++A RF   M+   + P+ V +N+LI             K    M+ 
Sbjct: 1264 NILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQT 1323

Query: 269  FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
             G    + T+  ++D     G + +  ++F  + K   +P+I VFSIL  G  RAG+ ++
Sbjct: 1324 CGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEE 1383

Query: 329  AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
            A      + K G+ P+ + +  +I+G CN   +  A+ +  +M E G  P+  T+  ++ 
Sbjct: 1384 AWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQ 1443

Query: 389  GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
               +  +   A +LL+ M  +   P ++   ++
Sbjct: 1444 NLLKENEIHEAIQLLEEMRNRNFSPDEAVTSML 1476



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 174/344 (50%), Gaps = 1/344 (0%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            M+ L   G+  EA   F  +   G    + TY +L+  L+R   +K +   ++ +   G 
Sbjct: 1127 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 1186

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             PD+  F  +I+   + G V EA +I + M+  G +P   TYNTL+ G   VG+ E++ K
Sbjct: 1187 SPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATK 1246

Query: 121  LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L + ++ D+ +K N  +YNIL+  +C    I+EA+    +M   G++P  VTYNTL  A 
Sbjct: 1247 LFESLA-DRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGAL 1305

Query: 181  AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
             Q G    A+++  EMQ         T  +++ G CK G++E+AM     +K+ E  PN+
Sbjct: 1306 CQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNI 1365

Query: 241  VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             VF+ L+ G       +   K    + + G++PD + ++ +++   + G++ +  ++   
Sbjct: 1366 EVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQ 1425

Query: 301  MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
            M + G  PD   F+++ +  ++  E  +A  +L  MR     P+
Sbjct: 1426 MEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 1469



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 199/413 (48%), Gaps = 8/413 (1%)

Query: 12   EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
            +A  +F+ + ++G      TY  L+  L + ++    + L  K+ K   K D   +  +I
Sbjct: 1034 DAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMII 1092

Query: 72   NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
            +A  + G   EA+ +F +M  +G  P    Y++L+ G    G+ +E+L+  + M + + +
Sbjct: 1093 DALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEM-EGRGI 1151

Query: 132  KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
              +  TYN L+         +E    +  MV  G  PDA T+  L     + G+   A+Q
Sbjct: 1152 SADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQ 1211

Query: 192  MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
            +L  M++    P+  T   +++G C  G +EDA +    + +  +  N+  +N LI G+ 
Sbjct: 1212 ILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGY- 1270

Query: 252  DIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
              KD   +D+A    EE    G+KP  VT++T++ A   +G +   Q++F +M   G   
Sbjct: 1271 -CKDQK-IDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFL 1328

Query: 309  DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
             +  + +L  G  + G  ++A  +  S++K    PN+ +F+ ++ G C A K++ A   +
Sbjct: 1329 KLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQF 1388

Query: 369  EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            +++ + G+ P+   Y  L+ G         A +LL  MEEKG  P   T  ++
Sbjct: 1389 DEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVI 1441



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 190/424 (44%), Gaps = 3/424 (0%)

Query: 27   PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
            P   T+  L+A++ +   + ++  +  K+   G++PD    N +I+ C     V     +
Sbjct: 944  PCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGV 1003

Query: 87   FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
            F      G +P   T  TL+KG        ++++L   M++ K +  + +TY IL+   C
Sbjct: 1004 FGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTK-KGLLGDAKTYGILINGLC 1062

Query: 147  SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                   A  +  KM     + D  TY  +  A  + G T  A  M  EM    + P+  
Sbjct: 1063 KARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVV 1121

Query: 207  TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
                ++ G C+ G +++A+ F   M+   +  ++  +NSLI G         V   L LM
Sbjct: 1122 VYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLM 1181

Query: 267  EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
             + G  PD  TF+ ++D     G +G+ Q+I + M   G EPDI  ++ L  G    G+ 
Sbjct: 1182 VDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQL 1241

Query: 327  QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            + A  +  S+   G+  NV  +  +I+G+C   K+  A   +E+M   G+ P+  TY TL
Sbjct: 1242 EDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTL 1301

Query: 387  LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
            +    ++ +   A++L   M+  G   K ST  ++ D     G   EA  + +S ++   
Sbjct: 1302 IGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEH 1361

Query: 447  SMPN 450
              PN
Sbjct: 1362 K-PN 1364



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 1/247 (0%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            MN L   G+  +A  +F  L + G +  + +Y  L+    + ++         ++   G+
Sbjct: 1232 MNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGL 1291

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            KP ++ +N +I A  +SG V  A K+F +M+  G     STY  L+ G    G  EE++ 
Sbjct: 1292 KPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMD 1351

Query: 121  LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L Q + + ++ KPN   ++IL+   C    +EEAW    ++  +G++PD + YN L    
Sbjct: 1352 LFQSIKKTEH-KPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGL 1410

Query: 181  AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
               G    A ++L++M+     P+  T  +I+    KE  + +A++ L  M+     P+ 
Sbjct: 1411 CNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDE 1470

Query: 241  VVFNSLI 247
             V + L+
Sbjct: 1471 AVTSMLL 1477



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 139/283 (49%), Gaps = 9/283 (3%)

Query: 4    LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            L  +GK  EA  I   +  +G  P ++TY TL+  L    + +    L   +   G+K +
Sbjct: 1200 LCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLN 1259

Query: 64   SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL- 122
               +N +IN   +   +DEA + F++M+  G KP+T TYNTLI      G+   + KL  
Sbjct: 1260 VFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFV 1319

Query: 123  QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
            ++ +  + +K +  TY +L+   C    +EEA ++   +  +  +P+   ++ L     +
Sbjct: 1320 EMQTCGQFLKLS--TYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCR 1377

Query: 183  YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
             G+   A +   E+  N + P+     I+++G C +G + +A++ L++M+E    P+ + 
Sbjct: 1378 AGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSIT 1437

Query: 243  FNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIM 282
            FN +I+  L     + + +A+ L+EE       PD    S ++
Sbjct: 1438 FNVIIQNLL---KENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 203/405 (50%), Gaps = 7/405 (1%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +   + + G  PT++T TTL+  L  Q      + L   +EK     D   +  +IN   
Sbjct: 134 VLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLC 193

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           ++G+   A+   +KM++   KP    Y+T++ G    G   E+L L   M+  K V+PN 
Sbjct: 194 KTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMN-GKGVRPNL 252

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY  L++  C+    +EA +++ +M+  G++PD    N L  A+ + G+  +A+ ++  
Sbjct: 253 VTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGF 312

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M      P+  T   ++  YC +  M +AMR  + M      P++VVF SLI G+   K+
Sbjct: 313 MILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKN 372

Query: 256 SDGVDKALTLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
              ++KA+ L+EE    G  PDV T++T++  +  AG     +E+F +M K G  P++  
Sbjct: 373 ---INKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQT 429

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
            +++  G  +     +A S+  +M K  +  N+V+++ ++ G C+A K+  A  ++  + 
Sbjct: 430 CAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLP 489

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             G+  N+  Y  ++ G  +     +AE+LL  MEE G  P   T
Sbjct: 490 GKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCT 534



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 192/393 (48%), Gaps = 1/393 (0%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           TY  L+  L +     + +  + K+E+   KP+ ++++ +++   + G V EA+ +  +M
Sbjct: 184 TYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEM 243

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
              G +P   TY  LI+G  N G+ +E+  LL  M +   ++P+ +  NILV A+C +  
Sbjct: 244 NGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMK-MGMRPDLQMLNILVDAFCKEGK 302

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           + +A +V+  M+ +G  PD  TYN+L   Y    +   A ++   M +    P+      
Sbjct: 303 VMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTS 362

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++ G+CK+ N+  AM  L  M ++   P++  + +LI GF          +    M ++G
Sbjct: 363 LIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYG 422

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
             P++ T + I+D      L+ +   +   M K+ ++ +I ++SIL  G   AG+   A 
Sbjct: 423 QVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAW 482

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            + +S+   G+  NV ++T +I G C    + +A  +   M E G  PN  TY   + G 
Sbjct: 483 ELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGL 542

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
              K+  R+ + L +M +KG     +T + + +
Sbjct: 543 LTKKEIARSIKYLTIMRDKGFSVDAATTEFIIN 575



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 200/440 (45%), Gaps = 1/440 (0%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           IT   ++  L R K      S++  + K G++P  +    +IN     GNV +A+ +   
Sbjct: 113 ITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADH 172

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M+         TY  LI G    G    ++  L+ M +++N KPN   Y+ ++   C   
Sbjct: 173 MEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKM-EERNWKPNVVVYSTIMDGLCKDG 231

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            + EA N+  +M   G++P+ VTY  L +    +G    A  +L EM    +RP+ +   
Sbjct: 232 LVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLN 291

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
           I+V  +CKEG +  A   +  M      P++  +NSLI  +      +   +   LM   
Sbjct: 292 ILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSR 351

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G  PD+V F++++  W     + K   + ++M K G  PD+  ++ L  G+ +AG P  A
Sbjct: 352 GRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAA 411

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           + +  +M KYG  PN+     ++ G C    +  A+S+ + M +  ++ N+  Y  LL G
Sbjct: 412 KELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDG 471

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMP 449
              A +   A EL   +  KG++       ++       G   +A+ +L + EE+     
Sbjct: 472 MCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPN 531

Query: 450 NKKDEIAVESIHRKQNLSAS 469
           N    + V+ +  K+ ++ S
Sbjct: 532 NCTYNVFVQGLLTKKEIARS 551



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/454 (24%), Positives = 212/454 (46%), Gaps = 45/454 (9%)

Query: 66  LFNAMINAC--SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           L  +M N C   +  N+DEA+ +FQ M      P+   +  L+     +     ++ L++
Sbjct: 41  LLISMRNLCWSGKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVK 100

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M     ++ +  T NI++   C    +   ++V+  M   G++P  +T  TL       
Sbjct: 101 HMFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQ 160

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G   +A  +   M+      +  T G++++G CK G+   A+ +L +M+E    PN+VV+
Sbjct: 161 GNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVY 220

Query: 244 NSLIKGFLDIKDSDG-VDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           ++++ G       DG V +AL L  E    GV+P++VT++ ++    + G   +   + D
Sbjct: 221 STIMDGLC----KDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLD 276

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL-------------------------- 333
           +M+K G+ PD+ + +IL   + + G+  +A+S++                          
Sbjct: 277 EMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQN 336

Query: 334 ---TSMRKY------GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
               +MR +      G  P++V+FT++I GWC    + +AM + E+M ++G  P++ T+ 
Sbjct: 337 KMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWT 396

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           TL+ G+ +A +P  A+EL   M + G  P   T  ++ D      L  EA  + K+ E+ 
Sbjct: 397 TLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKS 456

Query: 445 RQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPG 478
              +      I ++ +     L+A+   F  +PG
Sbjct: 457 NLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPG 490



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 170/365 (46%), Gaps = 36/365 (9%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           +G RP L+TY  L+  L    R+K   SL+ ++ K GM+PD  + N +++A  + G V +
Sbjct: 246 KGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQ 305

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A  +   M  +G  P   TYN+LI  Y    K  E++++  LM     + P+   +  L+
Sbjct: 306 AKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRL-PDIVVFTSLI 364

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
             WC   +I +A +++ +M   G  PD  T+ TL   + Q G    A+++   M      
Sbjct: 365 HGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQV 424

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           PN +TC +I+ G CKE  + +A+                   SL K              
Sbjct: 425 PNLQTCAVILDGLCKENLLSEAV-------------------SLAKA------------- 452

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              ME+  +  ++V +S ++D   SAG +    E+F  +   G++ ++++++I+ KG  +
Sbjct: 453 ---MEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCK 509

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G   KAE +L +M + G  PN   +   + G     ++ R++     M + G + +  T
Sbjct: 510 QGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAAT 569

Query: 383 YETLL 387
            E ++
Sbjct: 570 TEFII 574



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 138/291 (47%), Gaps = 5/291 (1%)

Query: 1   MNILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
           +NILV     +GK  +A  +   +I  G  P + TY +L+     Q +    + +   + 
Sbjct: 290 LNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMV 349

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
             G  PD ++F ++I+   +  N+++AM + ++M   G  P  +T+ TLI G+   G+P 
Sbjct: 350 SRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPL 409

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
            + +L   M +   V PN +T  +++   C +N + EA ++   M  S +  + V Y+ L
Sbjct: 410 AAKELFLNMHKYGQV-PNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSIL 468

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
                  G+   A ++   +    ++ N     I++ G CK+G+++ A   L  M+E   
Sbjct: 469 LDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGC 528

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
            PN   +N  ++G L  K+     K LT+M + G   D  T   I++  S+
Sbjct: 529 LPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINYLST 579



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/266 (19%), Positives = 108/266 (40%), Gaps = 38/266 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++I   + K +EA  +F+ ++  G  P ++ +T+L+    + K     + L+ ++ K G 
Sbjct: 329 IHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGF 388

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTST------------------- 101
            PD   +  +I    ++G    A ++F  M   G  P   T                   
Sbjct: 389 VPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVS 448

Query: 102 ----------------YNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
                           Y+ L+ G  + GK   + +L   +   K ++ N   Y I+++  
Sbjct: 449 LAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLP-GKGLQINVYIYTIMIKGL 507

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C + S+++A +++  M  +G  P+  TYN   +      E  R+ + L  M++     + 
Sbjct: 508 CKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDA 567

Query: 206 RTCGIIVSGYCKEGNMEDAMR-FLYR 230
            T   I++ Y      +  +R FL+R
Sbjct: 568 ATTEFIIN-YLSTNEGDTKIREFLFR 592


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 215/457 (47%), Gaps = 26/457 (5%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAAL-TRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           A+ +   +++ G +P  + Y  L+  + + ++  K +L L  K   + ++   +L    I
Sbjct: 131 AYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNI 190

Query: 72  NACSES----GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +  S      G  ++A  + ++M   G  P TSTY+ +I    N  K E++ +L Q M +
Sbjct: 191 SNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKR 250

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  + P+   Y  L+ ++C    IE+A N   +M   G  P+ VTY  L  AY +  +  
Sbjct: 251 N-GIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVS 309

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMK-------ELEVH--- 237
           +A ++   M +    PN  T   ++ G CK G +E A +    MK       ++++H   
Sbjct: 310 KANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRV 369

Query: 238 -------PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
                  PN+  + +L+ G             L  M   G +P+ V +  ++D    AG 
Sbjct: 370 VDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGK 429

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           + + QE+F  M++ G +P+++ +S L     +      A  +L+ M +    PNVV++T 
Sbjct: 430 LDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTE 489

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I G C   K   A  +   M E G NPN+ TY  ++ G+G++ +  +  ELLQ M  KG
Sbjct: 490 MIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKG 549

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS 447
             P   T +++ +   + GL  EA ++L   EE +Q+
Sbjct: 550 CAPNFVTYRVLINHCCSTGLLDEAHKLL---EEMKQT 583



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 201/440 (45%), Gaps = 25/440 (5%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P ++TY  L+     +++      ++S +  +G  P   +FN++++A   SG+   A K+
Sbjct: 75  PNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKL 134

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ------DKNVKPNDRTYNI 140
            +KM   GC+P    YN LI G  +  +P +   +L L  +      +  V  N    + 
Sbjct: 135 LKKMVQCGCQPGYVVYNILIGGICSSEEPGKD--VLDLAEKAYGEMLEAGVVLNKVNISN 192

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
             R  C     E+A+NV+ +M++ G  PD  TY+ +        +  +A Q+  EM+ N 
Sbjct: 193 FSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNG 252

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           + P+      ++  +CK G +E A  +   M+     PN+V + +LI  +L  +     +
Sbjct: 253 IAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKAN 312

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI-------------- 306
           +   +M   G  P++VT++ ++D    AG + K  +I+  M K  +              
Sbjct: 313 EVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDG 372

Query: 307 ---EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
              EP++  +  L  G  +A + ++A  +L SM   G  PN V++  +I G C A K+  
Sbjct: 373 ASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDE 432

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A  ++  M E G +PN+ TY +L+    + K+   A ++L  M E    P       + D
Sbjct: 433 AQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMID 492

Query: 424 SWRAIGLAREAKRVLKSAEE 443
               +G   EA +++   EE
Sbjct: 493 GLCKVGKTDEAYKLMVMMEE 512



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 200/445 (44%), Gaps = 32/445 (7%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G+R    T      +L +  +++  LSL+   EK+   PD++L+  MI+   E+   +EA
Sbjct: 5   GYRMDEFTLGCFAHSLCKSGKWREALSLL---EKEEFVPDTVLYTKMISGLCEASLFEEA 61

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           M    +M+ S C P   TY  L+ G  N  K     ++L +M  +    P+ R +N LV 
Sbjct: 62  MDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITE-GCYPSPRIFNSLVH 120

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR-----AEQMLFEMQN 198
           A+C       A+ ++ KMV  G QP  V YN L        E  +     AE+   EM  
Sbjct: 121 AYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLE 180

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
             V  N+          C  G  E A   +  M      P+   ++ +I G+L   ++  
Sbjct: 181 AGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVI-GYL--CNASK 237

Query: 259 VDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
           V+KA  L +E    G+ PDV  ++T++D++  AG + + +  FD+M + G  P++  ++ 
Sbjct: 238 VEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTA 297

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L   Y+++ +  KA  +   M   G  PN+V +T +I G C A K+++A  IY+ M +  
Sbjct: 298 LIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKEN 357

Query: 376 I-----------------NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
           +                  PN+ TY  L+ G  +A Q   A +LL+ M  +G  P     
Sbjct: 358 VEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVY 417

Query: 419 QLVADSWRAIGLAREAKRVLKSAEE 443
             + D     G   EA+ V  +  E
Sbjct: 418 DALIDGCCKAGKLDEAQEVFTTMLE 442



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 173/369 (46%), Gaps = 18/369 (4%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L    K  +A  +F  +   G  P +  YTTL+ +  +    +   +   ++E+DG  P+
Sbjct: 232 LCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPN 291

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + + A+I+A  +S  V +A ++++ M   GC P   TY  LI G    GK E++ ++ +
Sbjct: 292 VVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYK 351

Query: 124 LMSQDKNVK-----------------PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGI 166
           +M ++ NV+                 PN  TY  LV   C    ++EA +++  M   G 
Sbjct: 352 IMKKE-NVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGC 410

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR 226
           +P+ V Y+ L     + G+   A+++   M      PN  T   ++    K+  ++ A++
Sbjct: 411 EPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALK 470

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
            L +M E    PN+V++  +I G   +  +D   K + +MEE G  P+VVT++ ++D + 
Sbjct: 471 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFG 530

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
            +G + KC E+   M   G  P+   + +L       G   +A  +L  M++     +V 
Sbjct: 531 KSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVA 590

Query: 347 MFTTVISGW 355
            +  VI G+
Sbjct: 591 GYRKVIEGF 599



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/386 (23%), Positives = 172/386 (44%), Gaps = 20/386 (5%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G GK  +A+ +   ++ +G  P   TY+ ++  L    + +    L  +++++G+ PD
Sbjct: 197 LCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPD 256

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             ++  +I++  ++G +++A   F +M+  GC P   TY  LI  Y    K  ++ ++ +
Sbjct: 257 VYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYE 316

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV------------------ASG 165
           +M   K   PN  TY  L+   C    IE+A + +YK++                   + 
Sbjct: 317 MM-LSKGCTPNIVTYTALIDGLCKAGKIEKA-SQIYKIMKKENVEIPDVDMHFRVVDGAS 374

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
            +P+  TY  L     +  +   A  +L  M      PN      ++ G CK G +++A 
Sbjct: 375 NEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQ 434

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
                M E    PN+  ++SLI      K  D   K L+ M E    P+VV ++ ++D  
Sbjct: 435 EVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGL 494

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
              G   +  ++   M + G  P++  ++ +  G+ ++G  +K   +L  M   G  PN 
Sbjct: 495 CKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNF 554

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKM 371
           V +  +I+  C+   +  A  + E+M
Sbjct: 555 VTYRVLINHCCSTGLLDEAHKLLEEM 580



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 157/343 (45%), Gaps = 9/343 (2%)

Query: 113 GKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT 172
           GK  E+L LL+     +   P+   Y  ++   C  +  EEA + + +M AS   P+ +T
Sbjct: 24  GKWREALSLLE----KEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLT 79

Query: 173 YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMK 232
           Y  L        +  R +++L  M      P+ R    +V  YC+ G+   A + L +M 
Sbjct: 80  YRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMV 139

Query: 233 ELEVHPNLVVFNSLIKGFLDIKDS-----DGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
           +    P  VV+N LI G    ++      D  +KA   M E GV  + V  S        
Sbjct: 140 QCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCG 199

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
            G   K   +  +M+  G  PD   +S +      A + +KA  +   M++ G+ P+V +
Sbjct: 200 IGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYV 259

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           +TT+I  +C A  +++A + +++M   G  PN+ TY  L+  Y ++++  +A E+ ++M 
Sbjct: 260 YTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMML 319

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            KG  P   T   + D     G   +A ++ K  +++   +P+
Sbjct: 320 SKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPD 362



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 162/347 (46%), Gaps = 36/347 (10%)

Query: 25  HRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAM 84
           + P + TY  LV  L +  + K    L+  +  +G +P+ ++++A+I+ C ++G +DEA 
Sbjct: 375 NEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQ 434

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
           ++F  M + G  P   TY++LI       + + +LK+L  M ++ +  PN   Y  ++  
Sbjct: 435 EVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLEN-SCAPNVVIYTEMIDG 493

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
            C     +EA+ ++  M   G  P+ VTY  +   + + G   +  ++L +M +    PN
Sbjct: 494 LCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPN 553

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF-----------LDI 253
             T  ++++  C  G +++A + L  MK+     ++  +  +I+GF            +I
Sbjct: 554 FVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFIASLYLSFEI 613

Query: 254 KDSDGVDKA---LTLMEEF----------GVKPDVVTFS-----------TIMDAWSSAG 289
            ++D V  A     L++ F           +  ++ +FS           T+++  S A 
Sbjct: 614 SENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAH 673

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
              K  E++ DM+  G  P++ +   L KG +R    ++A  +L S+
Sbjct: 674 KADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLLDSI 720


>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
 gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
          Length = 607

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 113/471 (23%), Positives = 208/471 (44%), Gaps = 40/471 (8%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A ++ + L      P + T+ +L++AL R    + +  L + + +  +KPD + +  ++N
Sbjct: 115 ASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLN 174

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTST--YNTLIKGYGNVGKPEESLKLL-QLMSQDK 129
              ++G V +A+K+  +M   G          NT++ G   +G+ ++++  + + M Q  
Sbjct: 175 RLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVH 234

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD-------------------- 169
              PN  TYN L  A C    I+ A  +V +M   G+ P+                    
Sbjct: 235 GCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAA 294

Query: 170 -----------------AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
                            AVTY+TL  A+        A ++  EM +    P+      ++
Sbjct: 295 LDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMI 354

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           SG  + G + DA      MK+     +   +N LI GF   K      +    M+  G++
Sbjct: 355 SGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQ 414

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           PDV T++T++     AG      E+  +M+  G +P +  F  L  GY +AG+  +A  I
Sbjct: 415 PDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKI 474

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
             SM +  + PN V++ T+I   C + ++  A+ ++++M E  +  N+ TY  LL G  +
Sbjct: 475 FRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQD 534

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
              P +A EL+  M+E+   P   T+ ++ +    IG     K  ++  +E
Sbjct: 535 KNMPEKAFELMDQMKEERCTPDYVTMDVLMEWLPEIGETERLKCFMEQRDE 585



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 168/378 (44%), Gaps = 13/378 (3%)

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
           S   D A  +   +      P  ST+N+L+   G  G      +L   M ++ +VKP+  
Sbjct: 109 SSPADAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSM-REASVKPDIV 167

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASG--IQPDAVTYNTLARAYAQYGETYRAEQMLF 194
           TY IL+   C    + +A  V+ +M + G  +  D V  NT+     + G    A   + 
Sbjct: 168 TYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVD 227

Query: 195 E--MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           E   Q +   PN  T   +    C+ G+++ A + + RM++  V PN++  N+++ G   
Sbjct: 228 ERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCR 287

Query: 253 IKDSDGVDKALTLMEE-----FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           +     V  AL    E        + + VT+ST++ A+     +    E+F +M   G  
Sbjct: 288 VGR---VGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYP 344

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD  ++  +  G  +AG    A +I  SM+K G   +   +  +I G+C   ++  A  +
Sbjct: 345 PDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQL 404

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           +E+M   G+ P++ TY TLL    +A      +ELL  M + G +P   T   +   +  
Sbjct: 405 FEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCK 464

Query: 428 IGLAREAKRVLKSAEEDR 445
            G   EA ++ +S  E R
Sbjct: 465 AGKTDEALKIFRSMGEAR 482



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 102/191 (53%), Gaps = 5/191 (2%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NIL+G    K + HEAH +F  +   G +P + TY TL++ L +   F ++  L+  +  
Sbjct: 386 NILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMID 445

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
           DG +P  + F  +++   ++G  DEA+KIF+ M ++  +P T  YNTLI       + + 
Sbjct: 446 DGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDV 505

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           ++KL   M ++ NV  N  TYN L++    KN  E+A+ ++ +M      PD VT + L 
Sbjct: 506 AIKLFDEM-RENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLM 564

Query: 178 RAYAQYGETYR 188
               + GET R
Sbjct: 565 EWLPEIGETER 575


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 193/408 (47%), Gaps = 1/408 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           + + +I   H PT+ TY  ++  L + +       + + ++  G  PD +++  MI+   
Sbjct: 285 VLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLC 344

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           E G+  EA K++ +M D G +P   TYNT++ G    G  E + +L   M  +K      
Sbjct: 345 EMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMC-NKGYGTTT 403

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            T N ++   CS+   +EA+ V  KM  +GIQ DA+TYN+L R + + G+      +L E
Sbjct: 404 VTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNE 463

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           +     +P+     +++   CK+G+ E A R L  M    +HPN   +++++ G L   D
Sbjct: 464 LVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGD 523

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            + V +        G      T + I+    S G   +  E+F  M + GI+ D   ++ 
Sbjct: 524 FEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNS 583

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L +G+ + G+  K+ ++L  +   G+ P+   + ++I   C     + A  ++  M   G
Sbjct: 584 LIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKG 643

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           I P+    E L+ G  +  +     + L  M E  ++PKK+  + +A+
Sbjct: 644 IEPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDLAE 691



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/375 (24%), Positives = 175/375 (46%), Gaps = 1/375 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA+ +FN L + G+ P  + YTT++  L     F     L  ++   GM+P++  +N M+
Sbjct: 316 EAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTML 375

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +   +SG+ + A +++ +M + G   TT T N +I    + GK +E+ ++ + MS+   +
Sbjct: 376 HGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSE-TGI 434

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           + +  TYN L+R +C +  ++E  N++ ++VA   QP    Y  L     + G+   A++
Sbjct: 435 QADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKR 494

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L +M +  + PN  T   ++ G  K G+ E                     N +I    
Sbjct: 495 LLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELC 554

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
               SD   +    M E G+K D +T+++++  +   G +GK   + +++V  G++P   
Sbjct: 555 SRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSAS 614

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++ L     + G+ + A+ +   M   G+ P+  +   +ISG C   +    M     M
Sbjct: 615 SYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGM 674

Query: 372 CEIGINPNLKTYETL 386
            E  I P    +E L
Sbjct: 675 LENKIKPKKAAFEDL 689



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/489 (20%), Positives = 203/489 (41%), Gaps = 13/489 (2%)

Query: 54  KVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGC--KPTTSTYNTLIKGYGN 111
           ++++ G++   +  N++++ C ++G  +   + +Q+M  +G      T T   LI+ + +
Sbjct: 181 QLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQAFCD 240

Query: 112 VGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAV 171
            G+     +LL    +   + P + TYN L+  +C   +      V++ M+A    P   
Sbjct: 241 SGQVARGYELLNQFLK-TGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIY 299

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
           TY  +     +  E   A ++  ++++    P+      ++ G C+ G+  +A +  + M
Sbjct: 300 TYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEM 359

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
            +  + PN   +N+++ G L   D +   +    M   G     VT + I+    S G  
Sbjct: 360 MDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKS 419

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            +  E+F  M + GI+ D   ++ L +G+ + G+  +  ++L  +      P+V ++  +
Sbjct: 420 DEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELL 479

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I   C     + A  +   M   G++PN  TY+T+L G  ++       EL      KG 
Sbjct: 480 IIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGY 539

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHR---KQNLSA 468
               +T   +     + G + EA  + K   E       K D I   S+ R   K+    
Sbjct: 540 GTTTATCNKIISELCSRGKSDEASEMFKKMSE----TGIKADAITYNSLIRGFCKEGKVG 595

Query: 469 SNSTFLQIPGVVSSEHNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQPMVVCRKQ 528
            +   L        + + SS A +  Q+    D    + K L+ +    G++P    R+ 
Sbjct: 596 KSMNLLNELVAQGLQPSASSYASLIIQLCQNGDA--ESAKRLWGDMVSKGIEPHANLREH 653

Query: 529 CSQVGTCGQ 537
               G C Q
Sbjct: 654 LIS-GLCKQ 661



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/394 (20%), Positives = 170/394 (43%), Gaps = 8/394 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKD--GMKPDSILFNAMINACSESGNVDEAM 84
           P  I+   L  AL   K  ++     +K+ +D  G  PDS      +      G ++EA+
Sbjct: 122 PDPISSNMLFEALLDAKAVRA-----AKMVRDIAGFIPDSASLEQYVKCLCGVGFIEEAI 176

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK-PNDRTYNILVR 143
           +++ ++K++G + +    N+++ G    GK E   +  Q M +       N  T   L++
Sbjct: 177 EVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQ 236

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           A+C    +   + ++ + + +G+ P   TYN L   + Q        ++L  M      P
Sbjct: 237 AFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLP 296

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
              T   I++G CK     +A R    +K+    P+ V++ ++I G  ++       K  
Sbjct: 297 TIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLW 356

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M + G++P+  T++T++     +G   +  E++++M   G        + +       
Sbjct: 357 FEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSR 416

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+  +A  +   M + G+  + + + ++I G+C   K+   M++  ++      P++  Y
Sbjct: 417 GKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLY 476

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           E L+    +      A+ LL  M  KG+ P   T
Sbjct: 477 ELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYT 510



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 125/240 (52%), Gaps = 1/240 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  E   + N L+ +  +P++  Y  L+    +   F++   L+  +   G+ P++  
Sbjct: 451 EGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYT 510

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ M++   +SG+ +   +++ +  + G   TT+T N +I    + GK +E+ ++ + MS
Sbjct: 511 YDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMS 570

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +   +K +  TYN L+R +C +  + ++ N++ ++VA G+QP A +Y +L     Q G+ 
Sbjct: 571 E-TGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDA 629

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+++  +M +  + P+      ++SG CK+G   + M  L  M E ++ P    F  L
Sbjct: 630 ESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDL 689



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 68/139 (48%), Gaps = 1/139 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA  +F  + E G +   ITY +L+    ++ +    ++L++++   G++P 
Sbjct: 553 LCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPS 612

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +  + ++I    ++G+ + A +++  M   G +P  +    LI G    G+  E +  L 
Sbjct: 613 ASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLM 672

Query: 124 LMSQDKNVKPNDRTYNILV 142
            M ++K +KP    +  L 
Sbjct: 673 GMLENK-IKPKKAAFEDLA 690


>gi|297727717|ref|NP_001176222.1| Os10g0495400 [Oryza sativa Japonica Group]
 gi|255679525|dbj|BAH94950.1| Os10g0495400, partial [Oryza sativa Japonica Group]
          Length = 438

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 186/371 (50%), Gaps = 6/371 (1%)

Query: 5   VGKGKPHEAHYIFNCLIEEGH---RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK 61
           V +  P  A  +FN +   G     P L TY+ L+    R  R     + +  V K G +
Sbjct: 68  VARDSPAAAVSLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFR 127

Query: 62  PDSILFNAMINACSESGNVDEAMKI-FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            ++I F  ++          +AM I  ++M +  C P   +   L+KG  +  + +E+L+
Sbjct: 128 VEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALE 187

Query: 121 LLQLMSQDKN--VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           LL +M+ D+     P+  +Y  ++  +  +   ++A++  ++M+   I P+ VTY+++  
Sbjct: 188 LLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIA 247

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           A  +     +A ++L  M  N V P+  T   I+ GYC  G  ++A+  L +M+   V P
Sbjct: 248 ALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEP 307

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           N+V + SL+             K    M + G++PD+ T+ T++  +++ G + +   + 
Sbjct: 308 NVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 367

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           D MV+ GI+PD HVF+IL   Y +  +  +A  + + MR++G++PNVV + TVI   C +
Sbjct: 368 DLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKS 427

Query: 359 VKMQRAMSIYE 369
             +  AM  +E
Sbjct: 428 GSVDDAMLYFE 438



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 170/344 (49%), Gaps = 3/344 (0%)

Query: 47  SILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLI 106
           S+ + +++   D + PD   ++ +I  C  +G +D        +   G +    T+  L+
Sbjct: 78  SLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLL 137

Query: 107 KGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV---A 163
           KG     +  +++ ++     + +  P+  +  IL++  C +N  +EA  +++ M     
Sbjct: 138 KGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRG 197

Query: 164 SGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED 223
            G  PD V+Y T+   + + G++ +A     EM + ++ PN  T   I++  CK   M+ 
Sbjct: 198 GGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDK 257

Query: 224 AMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD 283
           AM  L  M +  V P+ + +NS++ G+            L  M   GV+P+VVT+ ++M+
Sbjct: 258 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMN 317

Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
                G   + ++IFD M K G+EPDI  +  L +GY   G   +  ++L  M + G+ P
Sbjct: 318 YLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQP 377

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           +  +F  +I  +    K+ +AM ++ KM + G+NPN+  Y T++
Sbjct: 378 DHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVI 421



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 152/313 (48%), Gaps = 6/313 (1%)

Query: 115 PEESLKLLQLMSQD--KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT 172
           P  ++ L   M++     V P+  TY+IL+   C    ++  +  +  ++  G + +A+T
Sbjct: 73  PAAAVSLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAIT 132

Query: 173 YNTLARAYAQYGETYRA-EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
           +  L +       T  A + +L  M      P+  +C I++ G C E   ++A+  L+ M
Sbjct: 133 FAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMM 192

Query: 232 KELE---VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
            +       P++V + ++I GF    DSD        M +  + P+VVT+S+I+ A   A
Sbjct: 193 ADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKA 252

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
             M K  E+ + MVK G+ PD   ++ +  GY  +G+P++A   L  MR  GV PNVV +
Sbjct: 253 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY 312

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
            ++++  C   +   A  I++ M + G+ P++ TY TLL GY           LL +M  
Sbjct: 313 RSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVR 372

Query: 409 KGVRPKKSTIQLV 421
            G++P      ++
Sbjct: 373 NGIQPDHHVFNIL 385



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 4/246 (1%)

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL-DIKDSD 257
           ++V P+  T  I++   C+ G ++     L  + +       + F  L+KG   D + SD
Sbjct: 89  DEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSD 148

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK---AGIEPDIHVFS 314
            +D  L  M E    PDV + + ++          +  E+   M      G  PD+  ++
Sbjct: 149 AMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 208

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            +  G+ + G+  KA S    M    + PNVV ++++I+  C A  M +AM +   M + 
Sbjct: 209 TVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKN 268

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G+ P+  TY ++L GY  + QP  A   L+ M   GV P   T + + +     G   EA
Sbjct: 269 GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEA 328

Query: 435 KRVLKS 440
           +++  S
Sbjct: 329 RKIFDS 334



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 62/119 (52%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L   G+  EA  IF+ + + G  P + TY TL+     +     + +L+  + ++G+
Sbjct: 316 MNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGI 375

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           +PD  +FN +I A ++   VD+AM +F KM+  G  P    Y T+I      G  ++++
Sbjct: 376 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAM 434


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 192/390 (49%), Gaps = 1/390 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G+  EA  +F+ + E G  P ++T+ +L+    +      +  L+ ++ + G 
Sbjct: 195 IDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGC 254

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K D + +NA+IN   + G ++ A   F  MK  G      T++T +  +   G   E++K
Sbjct: 255 KADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMK 314

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M + + +  N+ TY  L+   C    +++A  ++ +MV  G+  + VTY  L    
Sbjct: 315 LFAQM-RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGL 373

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +   AE +L  M+   VR NE     ++ G+    N E A+  L  MK   +  ++
Sbjct: 374 CKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDI 433

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            ++ +LI+G  ++   D     LT M+E G++P+ + ++T+MDA   +G + +   +   
Sbjct: 434 SLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQK 493

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           ++ +G +P++  +  L  G  +AG   +A S    MR  G+ PNV  +T ++ G C    
Sbjct: 494 ILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGC 553

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           +  A+ ++ +M   G++ +   Y  LL GY
Sbjct: 554 LNEAVQLFNEMVHKGMSLDKVVYTALLDGY 583



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 200/409 (48%), Gaps = 7/409 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L E+   P + T+  ++  L ++       SL S++++ G  PD + FN++I+   + G 
Sbjct: 179 LFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGE 238

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +DE  ++ ++M+ SGCK    TYN LI  +   G+ E +      M ++  V  N  T++
Sbjct: 239 LDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKRE-GVMANVVTFS 297

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
             V A+C +  + EA  +  +M   G+  +  TY  L     + G    A  +L EM   
Sbjct: 298 TFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQ 357

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            V  N  T  ++V G CKE  + +A   L  M++  V  N +++ +LI G    K+S   
Sbjct: 358 GVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNS--- 414

Query: 260 DKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           +KAL L+ E    G++ D+  +  ++    +   + + + +   M ++G+EP+  +++ +
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
                ++G+  +A ++L  +   G  PNV+ +  +I G C A  +  A+S + KM ++G+
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGL 534

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           +PN++ Y  L+ G  +      A +L   M  KG+   K     + D +
Sbjct: 535 DPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGY 583



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 102/446 (22%), Positives = 211/446 (47%), Gaps = 18/446 (4%)

Query: 20  LIEE----GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           L+EE    G +  ++TY  L+    +  R ++     + ++++G+  + + F+  ++A  
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G V EAMK+F +M+  G      TY  LI G    G+ ++++ LL  M + + V  N 
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVR-QGVPLNV 363

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY +LV   C +  + EA +V+  M  +G++ + + Y TL   +     + +A  +L E
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSE 423

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M+N  +  +    G ++ G C    +++A   L +M E  + PN +++ +++        
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFK--- 480

Query: 256 SDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           S  V +A+ ++++    G +P+V+T+  ++D    AG + +    F+ M   G++P++  
Sbjct: 481 SGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQA 540

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++ L  G  + G   +A  +   M   G+  + V++T ++ G+     +  A ++  KM 
Sbjct: 541 YTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMI 600

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR------ 426
           + G+  +L  Y   + G+        A E+   M   G+ P ++    +   ++      
Sbjct: 601 DSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLE 660

Query: 427 -AIGLAREAKRVLKSAEEDRQSMPNK 451
            AI L  E +RVL S  +   +   K
Sbjct: 661 EAISLQDEMERVLPSCTDSDTATDGK 686



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 168/376 (44%), Gaps = 42/376 (11%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P+   FN +I+   + G + EA  +F +MK+ GC P   T+N+LI GYG  G+       
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGE------- 238

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
                                        ++E   +V +M  SG + D VTYN L   + 
Sbjct: 239 -----------------------------LDEVEQLVEEMRRSGCKADVVTYNALINCFC 269

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           ++G    A      M+   V  N  T    V  +CKEG + +AM+   +M+   +  N  
Sbjct: 270 KFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEF 329

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
            +  LI G      +  +D A+ L++E    GV  +VVT++ ++D       + + +++ 
Sbjct: 330 TYTCLIDG---TCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVL 386

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
             M KAG+  +  +++ L  G+      +KA  +L+ M+  G+  ++ ++  +I G CN 
Sbjct: 387 RMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNV 446

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            K+  A S+  KM E G+ PN   Y T++    ++ +   A  +LQ + + G +P   T 
Sbjct: 447 HKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITY 506

Query: 419 QLVADSWRAIGLAREA 434
             + D     G   EA
Sbjct: 507 CALIDGLCKAGSIDEA 522



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 179/372 (48%), Gaps = 5/372 (1%)

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +++  ++ G +D+A++   ++++    P T T N ++         + S +L++ + +
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLAR----DRSGRLVRRLFE 181

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            +   PN  T+NI++   C +  + EA ++  +M   G  PD VT+N+L   Y + GE  
Sbjct: 182 -QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELD 240

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
             EQ++ EM+ +  + +  T   +++ +CK G ME A  +   MK   V  N+V F++ +
Sbjct: 241 EVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFV 300

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             F          K    M   G+  +  T++ ++D    AG +     + D+MV+ G+ 
Sbjct: 301 DAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVP 360

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
            ++  +++L  G  +  +  +AE +L  M K GV  N +++TT+I G       ++A+ +
Sbjct: 361 LNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGL 420

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
             +M   G+  ++  Y  L+ G     +   A+ LL  M+E G+ P       + D+   
Sbjct: 421 LSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFK 480

Query: 428 IGLAREAKRVLK 439
            G   EA  +L+
Sbjct: 481 SGKVPEAIAMLQ 492



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 130/275 (47%), Gaps = 7/275 (2%)

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
           A   +TL    A  G    A + +  ++  +V PN RTC  I+    ++     + R + 
Sbjct: 122 ASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARD----RSGRLVR 177

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
           R+ E    PN+  FN +I       +        + M+E G  PDVVTF++++D +   G
Sbjct: 178 RLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCG 237

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
            + + +++ ++M ++G + D+  ++ L   + + G  + A     +M++ GV  NVV F+
Sbjct: 238 ELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFS 297

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
           T +  +C    ++ AM ++ +M   G+  N  TY  L+ G  +A +   A  LL  M  +
Sbjct: 298 TFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQ 357

Query: 410 GVRPKKSTIQLVADSW---RAIGLAREAKRVLKSA 441
           GV     T  ++ D     R +  A +  R+++ A
Sbjct: 358 GVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKA 392



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 1/197 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+     GK  EA  +   +++ G +P +ITY  L+  L +       +S  +K+   G+
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGL 534

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   + A+++   ++G ++EA+++F +M   G       Y  L+ GY   G   ++  
Sbjct: 535 DPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFA 594

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M  D  ++ +   Y   +  +C+ N + EA  V  +M+  GI PD   YN L   Y
Sbjct: 595 LKAKMI-DSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKY 653

Query: 181 AQYGETYRAEQMLFEMQ 197
            + G    A  +  EM+
Sbjct: 654 QKLGNLEEAISLQDEME 670


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 188/396 (47%), Gaps = 10/396 (2%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
            +A  +   +I     P  +T+ T + A  +       + L+ ++ K G  PD I+++ +
Sbjct: 233 EQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTL 292

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           +N  SE G VDEA+K+   M    C+P T  YN  +KG    G+ EE  +L+  M + K+
Sbjct: 293 VNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVR-KD 348

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
             PND T++ L+ + C    +E A  V+ +M   G  PD V+YNT+   ++   +  RA+
Sbjct: 349 CPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFS---DQARAD 405

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
             L  +++   +P+  +   ++   CK     DA+  + +M + +   N + FN LI   
Sbjct: 406 DALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSL 465

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
                     +   LM ++   PD+VT+S++++ +S  GL     ++F  M       DI
Sbjct: 466 CQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM---PCRADI 522

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             ++   KG   A     A  ++  M      PN V F  +IS  C    + RA+ +YE+
Sbjct: 523 FSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQ 582

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
           M + GI P++ TY  L+ GY E  +   A + L  M
Sbjct: 583 MPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM 618



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 186/392 (47%), Gaps = 19/392 (4%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEES 118
           P  I  N +I        + +A ++ + +K SG     S +NTL+ GY   G++G  E  
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASGAADAVS-HNTLVAGYCRDGSLGDAERV 172

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           ++  +  S   NV     TY  L+  +C    + +A  ++  M    + PD  TYNT+ +
Sbjct: 173 VEAAR-ASGTANVV----TYTALIDGYCRSGRLADALRLIASM---PVAPDTYTYNTVLK 224

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
                 +  +AE+++ EM  N   PNE T    +  +C+ G ++ A+  L +M +    P
Sbjct: 225 GLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTP 284

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           +++++++L+ GF    +   VD+AL L+     +P+ V ++  +     AG   +  E+ 
Sbjct: 285 DVIIYSTLVNGF---SEHGRVDEALKLLNTMLCRPNTVCYNAALKGLCIAGRWEEVGELI 341

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
            +MV+    P+   FS L     +    + A  +L  M+KYG  P+VV + T+IS + + 
Sbjct: 342 AEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQ 401

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            +   A+ + + M      P+  ++  +L    +AK+ + A EL+  M +K  R  + T 
Sbjct: 402 ARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTF 458

Query: 419 QLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            ++ DS    G  ++A  V +   + R  MP+
Sbjct: 459 NILIDSLCQNGQVKDAIEVFELMPKYR-CMPD 489



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/378 (23%), Positives = 183/378 (48%), Gaps = 15/378 (3%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  + N ++    RP  + Y   +  L    R++ +  LI+++ +    P+   F
Sbjct: 300 GRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATF 356

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +IN+  ++  V+ A+++ ++M+  G  P   +YNT+I  + +  + +++LKLL+ M  
Sbjct: 357 STLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML- 415

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
               KP+  ++N +++  C      +A  +V KM+    + + +T+N L  +  Q G+  
Sbjct: 416 ---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVK 472

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF-LYRMKELEVHPNLVVFNSL 246
            A ++   M   +  P+  T   +++G+ ++G   D M F L+R   +    ++  +N+ 
Sbjct: 473 DAIEVFELMPKYRCMPDIVTYSSLINGFSEQG--LDEMAFDLFR--SMPCRADIFSYNAT 528

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +KG       D   + +  M      P+ VTF+ ++ +    GL+ +  ++++ M K GI
Sbjct: 529 LKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGI 588

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PDI  ++ L  GY   G    A   L++M      P+ + + +++ G C A + + A  
Sbjct: 589 TPDIFTYNALINGYSEQGRLDDALKFLSTM---PCEPDTISYNSILKGLCRAERWKDAEK 645

Query: 367 IYEKMCEIGINPNLKTYE 384
           +  +M      PN  T++
Sbjct: 646 LVTEMLRKNCTPNEVTFK 663


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/521 (23%), Positives = 234/521 (44%), Gaps = 55/521 (10%)

Query: 17  FNCLIE-EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           FN ++    H P +  +  ++++L +   FK  +S   ++E  G++P+   FN +IN  S
Sbjct: 40  FNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFS 99

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL-------------- 121
               ++ A  +  K+   G +P T T NTL++G    GK +E+L                
Sbjct: 100 HLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQV 159

Query: 122 ------------------LQLMSQDKN---VKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
                             LQL+ + +    V+P+   Y  ++ ++C    + +A+++  +
Sbjct: 160 SYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSE 219

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           M+   I P+ VT+N+L   +   G+   A  +L EM  N V PN  T  I++ G CKEG 
Sbjct: 220 MIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGE 279

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           ++ A   L  M +  V PN+V + SL+ G+  +K+ +        +   GV P+V ++S 
Sbjct: 280 VKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSV 339

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           +++      ++ +  ++F +M    + P+   +S L  G  ++G       ++  +   G
Sbjct: 340 MINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRG 399

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
              N++ + ++++G C   ++ +A+++  KM + GI P++ TY TL+ G  +  +   A+
Sbjct: 400 QPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQ 459

Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESI 460
            + Q +  KG         ++ +     G   EA  +L S  ED   MP   D +  E++
Sbjct: 460 RIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLL-SQMEDNGCMP---DAVTYETL 515

Query: 461 HRKQNLSASNSTFLQIPGVVSSEHNGSSAAKIRSQIVLRSD 501
                          I  +  +  NG +   +R  I   SD
Sbjct: 516 ---------------ISALFKNNKNGKAVKLLREMIARESD 541



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 206/405 (50%), Gaps = 12/405 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM---KPDS 64
           GK  EA    + +I +      ++Y TL+  L +    ++ L L+ K+E  G+   +PD 
Sbjct: 137 GKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIE--GLLLVRPDV 194

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           I++ A+I++  +   V +A  ++ +M      P   T+N+LI G+  VG+ +E++ LL  
Sbjct: 195 IMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNE 254

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           MS + NV PN  T+NIL+   C +  +++A +V+  M+  G++P+ VTY +L   Y    
Sbjct: 255 MSLN-NVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVK 313

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           E  +A+ +   +    V PN  +  ++++G CK   +++A++    M    + PN V ++
Sbjct: 314 EVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYS 373

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
           SLI G      S  +     L++E    G   +++T++++++       + K   +   M
Sbjct: 374 SLIDGLC---KSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKM 430

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
              GI+PD+  ++ L  G  + G  + A+ I   +   G   N+ M+T +I+G C     
Sbjct: 431 KDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFF 490

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
             A+S+  +M + G  P+  TYETL+    +  +  +A +LL+ M
Sbjct: 491 DEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREM 535



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 135/265 (50%), Gaps = 4/265 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  +A  + + +I++G  P ++TYT+L+      K       + + +   G+ P+
Sbjct: 274 LCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPN 333

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              ++ MIN   ++  VDEA+K+F++M      P T TY++LI G    G+  +   L+ 
Sbjct: 334 VHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLID 393

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            ++ ++    N  TYN L+   C  + +++A  ++ KM   GIQPD  TY TL     + 
Sbjct: 394 EIN-NRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKN 452

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A+++  ++       N R   ++++G CKEG  ++A+  L +M++    P+ V +
Sbjct: 453 GRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTY 512

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEE 268
            +LI       + +G  KA+ L+ E
Sbjct: 513 ETLISALFK-NNKNG--KAVKLLRE 534



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 54/94 (57%), Gaps = 2/94 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  +A  I+  L+ +G+   +  YT ++  L ++  F   LSL+S++E +G  PD
Sbjct: 449 LCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPD 508

Query: 64  SILFNAMINACSESGNVDEAMKIFQKM--KDSGC 95
           ++ +  +I+A  ++    +A+K+ ++M  ++S C
Sbjct: 509 AVTYETLISALFKNNKNGKAVKLLREMIARESDC 542


>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 628

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 211/448 (47%), Gaps = 23/448 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L    +  E   +F  ++ +G+RP   T+T LV  L  + +    + +   +     
Sbjct: 149 LNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDC 208

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKM----KDSG--CKPTTSTYNTLIKGYGNVGK 114
           +P +I    +I+    +GN   A+K+ + M     D G  CKPT  +Y+ +I      G 
Sbjct: 209 RPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDGL 268

Query: 115 PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYN 174
            E + +    M ++K + PN  TY  L+   CS +  EEA  +  +MV  G+ PD VT++
Sbjct: 269 VERAKEFFVEM-KEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFS 327

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
            L  A  + G+   A  +   M    V P+ RT  I++ GYC  G +++  +    M   
Sbjct: 328 VLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNK 387

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLM 291
               +   ++ L+K +   KDS+ V  A+ L  E    G++P V+T+S + DA     L 
Sbjct: 388 RCQHDAGSYSILMKAY--CKDSE-VHGAMILYREMMDRGIQPTVITYSKVGDARK---LF 441

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
           G+ Q  F DMV   I   I  +++   G  + G   +A  +   +       NV +F ++
Sbjct: 442 GEIQ--FQDMVLDSISYSI--YNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSL 497

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I+G C + K++ A  ++ ++C   + P++ TY  +++G  +  QP +A +L   MEEKG 
Sbjct: 498 INGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGC 557

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLK 439
            P   T   +    R + L  E  ++++
Sbjct: 558 APNVVTFNTL---MRGLCLNSERPKIVE 582



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 173/403 (42%), Gaps = 46/403 (11%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N   G    HEA + FN +I     P L  +  L  AL ++K++  ++S+  ++   G+
Sbjct: 79  INCKSGDFTLHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGL 138

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             + I  N ++N       V E   +F  +              L KGY           
Sbjct: 139 LKNFISLNILLNCLCSVKRVFEGFVVFGMI--------------LRKGY----------- 173

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
                      +PN RT+  LV+  C +  I EA  V   M     +P A+T   L    
Sbjct: 174 -----------RPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGL 222

Query: 181 AQYGETYRAEQMLFEMQNNQ------VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
            + G T  A ++   M N         +P   +   I+   CK+G +E A  F   MKE 
Sbjct: 223 CRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEK 282

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
            + PN+V + SL+ G     + +   +    M + G+ PDVVTFS ++ A    G + + 
Sbjct: 283 GIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEA 342

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
             +FD MV+  +EP    ++IL +GY  AG   + + I  SM       +   ++ ++  
Sbjct: 343 SGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKA 402

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
           +C   ++  AM +Y +M + GI P + TY  +    G+A++ +
Sbjct: 403 YCKDSEVHGAMILYREMMDRGIQPTVITYSKV----GDARKLF 441



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/378 (23%), Positives = 170/378 (44%), Gaps = 11/378 (2%)

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           IN  S    + EA+  F +M      P  S +N L   +G + K ++ L ++ +  +  +
Sbjct: 79  INCKSGDFTLHEALHFFNQMIHMQTTPALSRFNNL---FGALAKKKQYLHVISMCGRMNS 135

Query: 131 VK--PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           +    N  + NIL+   CS   + E + V   ++  G +P+  T+  L +     G+   
Sbjct: 136 IGLLKNFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGE 195

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE------LEVHPNLVV 242
           A ++   M     RP+  TCG+++SG C+ GN  +A++    M        +   P +V 
Sbjct: 196 AVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVS 255

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           ++ +I         +   +    M+E G+ P+VVT+++++    SA    + + +F +MV
Sbjct: 256 YSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMV 315

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G+ PD+  FS+L     + G+ ++A  +   M +  V P+   +  +I G+C A  + 
Sbjct: 316 DHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVD 375

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
               I+  M       +  +Y  L+  Y +  +   A  L + M ++G++P   T   V 
Sbjct: 376 EGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYSKVG 435

Query: 423 DSWRAIGLAREAKRVLKS 440
           D+ +  G  +    VL S
Sbjct: 436 DARKLFGEIQFQDMVLDS 453



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 108/221 (48%), Gaps = 14/221 (6%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI---LF 67
           H A  ++  +++ G +PT+ITY+ +  A  R+        L  +++   M  DSI   ++
Sbjct: 410 HGAMILYREMMDRGIQPTVITYSKVGDA--RK--------LFGEIQFQDMVLDSISYSIY 459

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N  ++   ++G V EA+ +F  +++       + +N+LI G     K E + +L   +  
Sbjct: 460 NVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCN 519

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  ++P+  TY I++   C     ++A+++  +M   G  P+ VT+NTL R      E  
Sbjct: 520 EA-LQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERP 578

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           +  ++L +M   ++ P+  T  I++    K+ N  + +  L
Sbjct: 579 KIVELLHKMAARKLSPDASTLLIVMDILLKDENYHECLNLL 619


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 103/411 (25%), Positives = 206/411 (50%), Gaps = 4/411 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G + +LI+   L++ L ++     +  +  ++ K  ++ + I FN ++N   + G ++ A
Sbjct: 115 GFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRA 174

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
             + + MK  G  P   TYNTLI GY   G +GK  ++  +L+ M   K + PN+ TYNI
Sbjct: 175 GDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVA-KGICPNEVTYNI 233

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+  +C   ++  A  V  +M   G++P+ VTYN L       G+   A  +  +M ++ 
Sbjct: 234 LIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSD 293

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           + PN  T  ++++G+CK   + +A+     M++  V PN + + +LI  +      +   
Sbjct: 294 LEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAF 353

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
               +M + G+ P+V T++ ++      G +   + + ++MV   +  D+  ++IL    
Sbjct: 354 ALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSL 413

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            + GE +KA  +L  M + G++P+ V + T++ G+C    ++ A+ +  +M   G   N+
Sbjct: 414 CKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANV 473

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
            T+  L+ G+    +   A  LL  M E+G+ P ++T +++ +     G  
Sbjct: 474 VTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFV 524



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 189/389 (48%), Gaps = 10/389 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV + +  +  +++  +I+      +I++  +V  L +  +      +I  ++  G+ P+
Sbjct: 130 LVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPN 189

Query: 64  SILFNAMINACSESGNVDEAMK---IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            I +N +I+   + G + +  K   I ++M   G  P   TYN LI G+        +++
Sbjct: 190 VITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMR 249

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M Q + ++PN  TYNIL+   CS   ++EA  +  +MV+S ++P+ VT+N L   +
Sbjct: 250 VFGEM-QRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGF 308

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A  +  +M+   V PN  T   ++  YCK+G MEDA      M +  + P +
Sbjct: 309 CKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEV 368

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEI 297
             +N LI G     D   V  A +LM E   K    DVVT++ ++D+    G   K  ++
Sbjct: 369 STYNCLIAGLCRKGD---VKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKL 425

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            D+M + G+ P    ++ L  GY R G  + A  + T M + G   NVV    +I G+C 
Sbjct: 426 LDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCL 485

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             +++ A  +  +M E G+ PN  TYE +
Sbjct: 486 KGRLEDANGLLNEMLERGLVPNRTTYEII 514



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 205/428 (47%), Gaps = 11/428 (2%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINAC---SESGNVDEAMKI 86
           I    LV A  R  +         +    G K   I  N +++     SE+G+++    +
Sbjct: 86  ILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDME---FV 142

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           +++M     +    ++N ++ G   VGK   +  +++ M +   V PN  TYN L+  +C
Sbjct: 143 YREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDM-KVWGVSPNVITYNTLIDGYC 201

Query: 147 SKNSIEEAWN---VVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
               I + +    ++ +MVA GI P+ VTYN L   + +      A ++  EMQ   +RP
Sbjct: 202 KMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRP 261

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  T  I+++G C +G +++A+    +M   ++ PN+V  N LI GF   K  +      
Sbjct: 262 NVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLF 321

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             ME+ GV P+ +T++T++DA+   G M     +++ M+  GI P++  ++ L  G  R 
Sbjct: 322 NDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRK 381

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+ + A S++  M    +  +VV +  +I   C   + ++A+ + ++M E G+NP+  TY
Sbjct: 382 GDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTY 441

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            TL+ GY        A  +   ME KG +    T  ++   +   G   +A  +L    E
Sbjct: 442 NTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLE 501

Query: 444 DRQSMPNK 451
            R  +PN+
Sbjct: 502 -RGLVPNR 508



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 145/282 (51%), Gaps = 7/282 (2%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F  +  +G RP ++TY  L+  L    +    ++L  ++    ++P+ +  N +IN
Sbjct: 247 AMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLIN 306

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              ++  V+EA+ +F  M+  G  P   TY TLI  Y   G+ E++  L  +M  D+ + 
Sbjct: 307 GFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMI-DRGIF 365

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P   TYN L+   C K  ++ A +++ +MV+  +  D VTYN L  +  + GE+ +A ++
Sbjct: 366 PEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKL 425

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL- 251
           L EM    + P+  T   ++ GYC+EGN+  A+    RM+      N+V  N LIKGF  
Sbjct: 426 LDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCL 485

Query: 252 --DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
              ++D++G+   L  M E G+ P+  T+  I +     G +
Sbjct: 486 KGRLEDANGL---LNEMLERGLVPNRTTYEIIKEEMMEKGFV 524



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 153/316 (48%), Gaps = 4/316 (1%)

Query: 158 VYK-MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
           VY+ M+   I+ + +++N +     + G+  RA  ++ +M+   V PN  T   ++ GYC
Sbjct: 142 VYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYC 201

Query: 217 KEG---NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
           K G    M  A   L  M    + PN V +N LI GF   ++  G  +    M+  G++P
Sbjct: 202 KMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRP 261

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           +VVT++ +++   S G + +   + D MV + +EP++   ++L  G+ +     +A ++ 
Sbjct: 262 NVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLF 321

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M K GV PN + +TT+I  +C   +M+ A ++Y  M + GI P + TY  L+ G    
Sbjct: 322 NDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRK 381

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKD 453
                A  L+  M  K +     T  ++ DS    G +R+A ++L    E   +  +   
Sbjct: 382 GDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTY 441

Query: 454 EIAVESIHRKQNLSAS 469
              ++   R+ NL A+
Sbjct: 442 NTLMDGYCREGNLRAA 457



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 118/239 (49%), Gaps = 1/239 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  EA  + + ++     P ++T+  L+    + K     ++L + +EK G+
Sbjct: 270 INGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGV 329

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+++ +  +I+A  + G +++A  ++  M D G  P  STYN LI G    G  + +  
Sbjct: 330 DPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARS 389

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L+  M   K +  +  TYNIL+ + C K    +A  ++ +M   G+ P  VTYNTL   Y
Sbjct: 390 LMNEMVS-KKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGY 448

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
            + G    A  +   M+    + N  T  +++ G+C +G +EDA   L  M E  + PN
Sbjct: 449 CREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPN 507



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 152/318 (47%), Gaps = 12/318 (3%)

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           ++LV A+     I   +    +    G +   ++ N L     +  E    E +  EM  
Sbjct: 89  DMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIK 148

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
            ++  N  +  I+V+G CK G +  A   +  MK   V PN++ +N+LI G+  +     
Sbjct: 149 RKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGK 208

Query: 259 VDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
           + KA  +++E    G+ P+ VT++ ++D +     +     +F +M + G+ P++  ++I
Sbjct: 209 MYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNI 268

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  G    G+  +A ++   M    + PNVV    +I+G+C    +  A++++  M + G
Sbjct: 269 LINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQG 328

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ-LVADSWRAIGLAREA 434
           ++PN  TY TL+  Y +  +   A  L  +M ++G+ P+ ST   L+A      GL R+ 
Sbjct: 329 VDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIA------GLCRKG 382

Query: 435 KRVLKSAEEDRQSMPNKK 452
              +K+A      M +KK
Sbjct: 383 D--VKAARSLMNEMVSKK 398


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 191/387 (49%), Gaps = 4/387 (1%)

Query: 10  PHEAHYIFNCLIEEGH-RPTLITYTTLVAALTRQKRFKSILSL--ISKVEKDGMKPDSIL 66
           P +A  +F  +++E   R T+ ++ +++  + ++  F   L         K  + P+ + 
Sbjct: 131 PEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLS 190

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           FN +I A  + G VD A+++F++M    C+P   TY TL+ G     + +E++ LL  M 
Sbjct: 191 FNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEM- 249

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           Q +   P+  T+N+L+   C K  +     +V  M   G  P+ VTYNT+       G+ 
Sbjct: 250 QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL 309

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A  +L  M  ++  PN+ T G +++G  K+G   D +  L  ++E   H N   +++L
Sbjct: 310 DKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTL 369

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G    + S+        M E G +P++V +S ++D     G + + +EI  +MV  G 
Sbjct: 370 ISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGC 429

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+   +S L KG+ + G  QKA  +   M K    PN + ++ +I G C   K++ AM 
Sbjct: 430 TPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMM 489

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEA 393
           ++  M   G+ P++  Y +++ G   A
Sbjct: 490 MWTHMLGRGLRPDVVAYSSMIHGLCNA 516



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 115/470 (24%), Positives = 221/470 (47%), Gaps = 19/470 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLI--EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           +N+++ +G  H A   + C +  +    P ++++  ++ A+ +       + +  ++   
Sbjct: 158 LNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQ 217

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
             +PD   +  +++   +   +DEA+ +  +M+  GC P++ T+N LI G    G     
Sbjct: 218 KCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRV 277

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
            KL+  M   K   PN+ TYN ++   C K  +++A +++ +MVAS   P+ VTY TL  
Sbjct: 278 TKLVDNMFL-KGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLIN 336

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
              + G +     +L  ++      NE     ++SG  KE   E+AM    +M E    P
Sbjct: 337 GLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQP 396

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           N+VV+++LI G       D   + L  M   G  P+  T+S+++  +   G   K   ++
Sbjct: 397 NIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVW 456

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
            +M K    P+   +S+L  G    G+ ++A  + T M   G+ P+VV ++++I G CNA
Sbjct: 457 KEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNA 516

Query: 359 VKMQRAMSIY-EKMC-EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
             ++  + ++ E +C E    P++ TY  LL    +      A +LL  M ++G  P   
Sbjct: 517 GSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLI 576

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNL 466
           T  +  ++ R           L   ++ R+ +    DE+ V  +H++Q +
Sbjct: 577 TCNIFLNALR---------EKLNPPQDGREFL----DELVVR-LHKRQRI 612



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 172/394 (43%), Gaps = 40/394 (10%)

Query: 96  KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
           K   ST+ +LI+ Y N G      ++   M +++ V   ++ + ++ RA+   +  E+A 
Sbjct: 77  KSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFI-EKNFILVFRAYGKAHLPEKAI 135

Query: 156 NVVYKMV--------------------------------------ASGIQPDAVTYNTLA 177
            +  +MV                                       + I P+ +++N + 
Sbjct: 136 ELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVI 195

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
           +A  + G   RA ++  EM   +  P+  T   ++ G CKE  +++A+  L  M+     
Sbjct: 196 KAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCF 255

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P+ V FN LI G     D   V K +  M   G  P+ VT++TI++     G + K   +
Sbjct: 256 PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSL 315

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            D MV +   P+   +  L  G V+ G       +L+S+ + G H N   ++T+ISG   
Sbjct: 316 LDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFK 375

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             K + AM +++KM E G  PN+  Y  L+ G     +   A+E+L  M  KG  P   T
Sbjct: 376 EEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFT 435

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
              +   +   G +++A RV K   ++   +PN+
Sbjct: 436 YSSLIKGFFKTGNSQKAIRVWKEMAKN-NCVPNE 468


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 192/390 (49%), Gaps = 1/390 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G+  EA  +F+ + E G  P ++T+ +L+    +      +  L+ ++ + G 
Sbjct: 195 IDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGC 254

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K D + +NA+IN   + G ++ A   F  MK  G      T++T +  +   G   E++K
Sbjct: 255 KADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMK 314

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M + + +  N+ TY  L+   C    +++A  ++ +MV  G+  + VTY  L    
Sbjct: 315 LFAQM-RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGL 373

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +   AE +L  M+   VR NE     ++ G+    N E A+  L  MK   +  ++
Sbjct: 374 CKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDI 433

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            ++ +LI+G  ++   D     LT M+E G++P+ + ++T+MDA   +G + +   +   
Sbjct: 434 SLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQK 493

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           ++ +G +P++  +  L  G  +AG   +A S    MR  G+ PNV  +T ++ G C    
Sbjct: 494 ILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGC 553

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           +  A+ ++ +M   G++ +   Y  LL GY
Sbjct: 554 LNEAVQLFNEMVHKGMSLDKVVYTALLDGY 583



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 200/409 (48%), Gaps = 7/409 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L E+   P + T+  ++  L ++       SL S++++ G  PD + FN++I+   + G 
Sbjct: 179 LFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGE 238

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +DE  ++ ++M+ SGCK    TYN LI  +   G+ E +      M ++  V  N  T++
Sbjct: 239 LDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKRE-GVMANVVTFS 297

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
             V A+C +  + EA  +  +M   G+  +  TY  L     + G    A  +L EM   
Sbjct: 298 TFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQ 357

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            V  N  T  ++V G CKE  + +A   L  M++  V  N +++ +LI G    K+S   
Sbjct: 358 GVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNS--- 414

Query: 260 DKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
           +KAL L+ E    G++ D+  +  ++    +   + + + +   M ++G+EP+  +++ +
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
                ++G+  +A ++L  +   G  PNV+ +  +I G C A  +  A+S + KM ++G+
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGL 534

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           +PN++ Y  L+ G  +      A +L   M  KG+   K     + D +
Sbjct: 535 DPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGY 583



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 101/438 (23%), Positives = 209/438 (47%), Gaps = 18/438 (4%)

Query: 20  LIEE----GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           L+EE    G +  ++TY  L+    +  R ++     + ++++G+  + + F+  ++A  
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G V EAMK+F +M+  G      TY  LI G    G+ ++++ LL  M + + V  N 
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVR-QGVPLNV 363

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY +LV   C +  + EA +V+  M  +G++ + + Y TL   +     + +A  +L E
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSE 423

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M+N  +  +    G ++ G C    +++A   L +M E  + PN +++ +++        
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFK--- 480

Query: 256 SDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           S  V +A+ ++++    G +P+V+T+  ++D    AG + +    F+ M   G++P++  
Sbjct: 481 SGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQA 540

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++ L  G  + G   +A  +   M   G+  + V++T ++ G+     +  A ++  KM 
Sbjct: 541 YTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMI 600

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR------ 426
           + G+  +L  Y   + G+        A E+   M   G+ P ++    +   ++      
Sbjct: 601 DSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLE 660

Query: 427 -AIGLAREAKRVLKSAEE 443
            AI L  E +RVL S  +
Sbjct: 661 EAISLQDEMERVLPSCTD 678



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 168/376 (44%), Gaps = 42/376 (11%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P+   FN +I+   + G + EA  +F +MK+ GC P   T+N+LI GYG  G+       
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGE------- 238

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
                                        ++E   +V +M  SG + D VTYN L   + 
Sbjct: 239 -----------------------------LDEVEQLVEEMRRSGCKADVVTYNALINCFC 269

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           ++G    A      M+   V  N  T    V  +CKEG + +AM+   +M+   +  N  
Sbjct: 270 KFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEF 329

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
            +  LI G      +  +D A+ L++E    GV  +VVT++ ++D       + + +++ 
Sbjct: 330 TYTCLIDG---TCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVL 386

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
             M KAG+  +  +++ L  G+      +KA  +L+ M+  G+  ++ ++  +I G CN 
Sbjct: 387 RMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNV 446

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            K+  A S+  KM E G+ PN   Y T++    ++ +   A  +LQ + + G +P   T 
Sbjct: 447 HKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITY 506

Query: 419 QLVADSWRAIGLAREA 434
             + D     G   EA
Sbjct: 507 CALIDGLCKAGSIDEA 522



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 179/372 (48%), Gaps = 5/372 (1%)

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +++  ++ G +D+A++   ++++    P T T N ++         + S +L++ + +
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLAR----DRSGRLVRRLFE 181

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            +   PN  T+NI++   C +  + EA ++  +M   G  PD VT+N+L   Y + GE  
Sbjct: 182 -QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELD 240

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
             EQ++ EM+ +  + +  T   +++ +CK G ME A  +   MK   V  N+V F++ +
Sbjct: 241 EVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFV 300

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             F          K    M   G+  +  T++ ++D    AG +     + D+MV+ G+ 
Sbjct: 301 DAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVP 360

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
            ++  +++L  G  +  +  +AE +L  M K GV  N +++TT+I G       ++A+ +
Sbjct: 361 LNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGL 420

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
             +M   G+  ++  Y  L+ G     +   A+ LL  M+E G+ P       + D+   
Sbjct: 421 LSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFK 480

Query: 428 IGLAREAKRVLK 439
            G   EA  +L+
Sbjct: 481 SGKVPEAIAMLQ 492



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 129/274 (47%), Gaps = 4/274 (1%)

Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
           A   +TL    A  G    A + +  ++  +V PN RTC  I+    ++     + R + 
Sbjct: 122 ASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARD----RSGRLVR 177

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
           R+ E    PN+  FN +I       +        + M+E G  PDVVTF++++D +   G
Sbjct: 178 RLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCG 237

Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
            + + +++ ++M ++G + D+  ++ L   + + G  + A     +M++ GV  NVV F+
Sbjct: 238 ELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFS 297

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
           T +  +C    ++ AM ++ +M   G+  N  TY  L+ G  +A +   A  LL  M  +
Sbjct: 298 TFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQ 357

Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           GV     T  ++ D         EA+ VL+  E+
Sbjct: 358 GVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEK 391



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 1/197 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+     GK  EA  +   +++ G +P +ITY  L+  L +       +S  +K+   G+
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGL 534

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   + A+++   ++G ++EA+++F +M   G       Y  L+ GY   G   ++  
Sbjct: 535 DPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFA 594

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M  D  ++ +   Y   +  +C+ N + EA  V  +M+  GI PD   YN L   Y
Sbjct: 595 LKAKMI-DSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKY 653

Query: 181 AQYGETYRAEQMLFEMQ 197
            + G    A  +  EM+
Sbjct: 654 QKLGNLEEAISLQDEME 670


>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
          Length = 680

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 202/427 (47%), Gaps = 3/427 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L+ +    T +TY  L+ A  R    +  L+LI+K+ +DG + D + ++ +I + + S  
Sbjct: 159 LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNK 218

Query: 80  VDEAM--KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT 137
           +D  M  +++++++    +      N +I G+   G P ++L+LL  M+Q   +     T
Sbjct: 219 IDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLG-MAQATGLSAKTAT 277

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
              ++ A        EA  +  ++  SGI+P    YN L + Y + G    AE M+ EM+
Sbjct: 278 LVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEME 337

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
              V P+E T  +++  Y   G  E A   L  M+  +V PN  VF+ L+ GF D  +  
Sbjct: 338 KRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQ 397

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
              + L  M+  GVKPD   ++ ++D +     +      FD M+  GIEPD   ++ L 
Sbjct: 398 KTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI 457

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
             + + G    AE +  +M + G  P    +  +I+ + +  +      +  KM   GI 
Sbjct: 458 DCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL 517

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           PN+ T+ TL+  YG++ +   A E L+ M+  G++P  +    + +++   GL+ +A   
Sbjct: 518 PNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNA 577

Query: 438 LKSAEED 444
            +    D
Sbjct: 578 FRVMTSD 584



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 197/399 (49%), Gaps = 1/399 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  EA  +F  L + G +P    Y  L+    +    K   S++S++EK G+
Sbjct: 282 ISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGV 341

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   ++ +I+A   +G  + A  + ++M+    +P +  ++ L+ G+ + G+ +++ +
Sbjct: 342 SPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQ 401

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+ M +   VKP+ + YN+++  +   N ++ A     +M++ GI+PD VT+NTL   +
Sbjct: 402 VLKEM-KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 460

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            ++G    AE+M   M+     P   T  I+++ Y  +   +D  R L +MK   + PN+
Sbjct: 461 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 520

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V   +L+  +      +   + L  M+  G+KP    ++ +++A++  GL  +    F  
Sbjct: 521 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 580

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G++P +   + L   +       +A ++L  M++ GV P+VV +TT++       K
Sbjct: 581 MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDK 640

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
            Q+   +YE+M   G  P+ K    L       KQ  RA
Sbjct: 641 FQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQTLRA 679



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 191/394 (48%), Gaps = 3/394 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSI--LSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++G++   + Y+ ++ +LTR  +  S+  L L  ++E+D ++ D  L N +I   ++SG+
Sbjct: 196 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 255

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             +A+++    + +G    T+T  ++I    + G+  E+  L + + Q   +KP  R YN
Sbjct: 256 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQ-SGIKPRTRAYN 314

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L++ +     +++A ++V +M   G+ PD  TY+ L  AY   G    A  +L EM+  
Sbjct: 315 ALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG 374

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            V+PN      +++G+   G  +   + L  MK + V P+   +N +I  F      D  
Sbjct: 375 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA 434

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
                 M   G++PD VT++T++D     G     +E+F+ M + G  P    ++I+   
Sbjct: 435 MTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINS 494

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y         + +L  M+  G+ PNVV  TT++  +  + +   A+   E+M  +G+ P+
Sbjct: 495 YGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPS 554

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
              Y  L+  Y +     +A    +VM   G++P
Sbjct: 555 STMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 588



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 62/317 (19%), Positives = 128/317 (40%), Gaps = 49/317 (15%)

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           Y+IL+ A      + EA+ +  K   +      +TYN L  A A+  +  +A  ++ +M+
Sbjct: 141 YSILIHALGRSEKLYEAFLLSQKQTLT-----PLTYNALIGACARNNDIEKALNLIAKMR 195

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE---VHPNLVVFNSLIKGFLDIK 254
            +  + +     +++    +  N  D++  L   KE+E   +  ++ + N +I GF    
Sbjct: 196 QDGYQSDFVNYSLVIQSLTR-SNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSG 254

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           D     + L + +  G+     T  +I+ A + +G                         
Sbjct: 255 DPSKALQLLGMAQATGLSAKTATLVSIISALADSG------------------------- 289

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
                        +AE++   +R+ G+ P    +  ++ G+     ++ A S+  +M + 
Sbjct: 290 ----------RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR 339

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G++P+  TY  L+  Y  A +   A  +L+ ME   V+P       +   +R  G  ++ 
Sbjct: 340 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKT 399

Query: 435 KRVLK-----SAEEDRQ 446
            +VLK       + DRQ
Sbjct: 400 FQVLKEMKSIGVKPDRQ 416


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 226/476 (47%), Gaps = 46/476 (9%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           + G+R +   Y  L+  L     FK+I  L+ +++ +G+     LF +++    ++G   
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPG 163

Query: 82  EAMKIFQKMKD-SGCKPTTSTYNTLI---------------------------------- 106
           +  ++  +M++   C+PT  +YN ++                                  
Sbjct: 164 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 223

Query: 107 -KGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
            K +  V + + +L LL+ M++   V PN   Y  L+ +    N + EA  ++ +M   G
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCV-PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 282

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
             PDA T+N +     ++     A +M+  M      P++ T G +++G CK G ++ A 
Sbjct: 283 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK 342

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT-LMEEFGVKPDVVTFSTIMDA 284
              YR+ +    P +V+FN+LI GF+     D     L+ ++  +G+ PDV T+++++  
Sbjct: 343 DLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 398

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           +   GL+G   E+  DM   G +P+++ ++IL  G+ + G+  +A ++L  M   G+ PN
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
            V F  +IS +C   ++  A+ I+ +M   G  P++ T+ +L+ G  E  +   A  LL+
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESI 460
            M  +GV     T   + +++   G  +EA++++   E   Q  P   DEI   S+
Sbjct: 519 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN--EMVFQGSP--LDEITYNSL 570



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 131/534 (24%), Positives = 236/534 (44%), Gaps = 70/534 (13%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + ILV       A  +F  ++     PTL T+  ++ A        S LSL+  + K G 
Sbjct: 189 LEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGC 248

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+S+++  +I++ S+   V+EA+++ ++M   GC P   T+N +I G     +  E+ K
Sbjct: 249 VPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAK 308

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK-------------------- 160
           ++  M   +   P+D TY  L+   C    ++ A ++ Y+                    
Sbjct: 309 MVNRMLI-RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHG 367

Query: 161 -----------MVAS-GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
                      MV S GI PD  TYN+L   Y + G    A ++L +M+N   +PN  + 
Sbjct: 368 RLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSY 427

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD---------------- 252
            I+V G+CK G +++A   L  M    + PN V FN LI  F                  
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487

Query: 253 ----------------IKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGK 293
                           + + D +  AL L+ +    GV  + VT++T+++A+   G + +
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
            +++ ++MV  G   D   ++ L KG  RAGE  KA S+   M + G  P+ +    +I+
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN 607

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G C +  ++ A+   ++M   G  P++ T+ +L+ G   A +      + + ++ +G+ P
Sbjct: 608 GLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPP 667

Query: 414 KKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKD-EIAVESIHRKQNL 466
              T   +       G   +A  +L    ED   +PN +   I ++SI  ++ L
Sbjct: 668 DTVTFNTLMSWLCKGGFVYDACLLLDEGIED-GFVPNHRTWSILLQSIIPQETL 720



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 2/216 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
            A ++   +I EG     +TY TL+ A  R+   K    L++++   G   D I +N++I
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
                +G VD+A  +F+KM   G  P+  + N LI G    G  EE+++  + M   +  
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL-RGS 630

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            P+  T+N L+   C    IE+   +  K+ A GI PD VT+NTL     + G  Y A  
Sbjct: 631 TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACL 690

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
           +L E   +   PN RT  I++     +  + D  RF
Sbjct: 691 LLDEGIEDGFVPNHRTWSILLQSIIPQETL-DRRRF 725


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/480 (25%), Positives = 214/480 (44%), Gaps = 45/480 (9%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  + + +++ G  P ++T+ TL+    ++        L   +E+ G++PD I ++ +I+
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK-PEESLKLLQLMSQDKNV 131
              ++G +    K+F +    G K     +++ I  Y   G     S+   +++ Q   +
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ--GI 387

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PN  TY IL++  C    I EA+ +  +++  G++P  VTY++L   + + G       
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +  +M      P+    G++V G  K+G M  AMRF  +M    +  N+VVFNSLI G+ 
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIM------DAWSS------------------ 287
            +   D   K   LM  +G+KPDV TF+T+M      DA+                    
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNK 567

Query: 288 -----------AGLMGKCQEI------FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
                        L+ KC  I      F+++++  +EPDI  ++ +  GY       +AE
Sbjct: 568 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 627

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            I   ++     PN V  T +I   C    M  A+ ++  M E G  PN  TY  L+  +
Sbjct: 628 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 687

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            ++     + +L + M+EKG+ P   +  ++ D     G   EA  +   A  D + +P+
Sbjct: 688 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA-IDAKLLPD 746



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 91/420 (21%), Positives = 201/420 (47%), Gaps = 9/420 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++ V  G    A  ++  ++ +G  P ++TYT L+  L +  R      +  ++ K GM
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P  + ++++I+   + GN+     +++ M   G  P    Y  L+ G    G    +++
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482

Query: 121 L-LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR- 178
             ++++ Q  +++ N   +N L+  WC  N  +EA  V   M   GI+PD  T+ T+ R 
Sbjct: 483 FSVKMLGQ--SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540

Query: 179 -----AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
                A+ ++ +     Q+   MQ N++  +   C +++    K   +EDA +F   + E
Sbjct: 541 SIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 600

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
            ++ P++V +N++I G+  ++  D  ++   L++     P+ VT + ++        M  
Sbjct: 601 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDG 660

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
              +F  M + G +P+   +  L   + ++ + + +  +   M++ G+ P++V ++ +I 
Sbjct: 661 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 720

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G C   ++  A +I+ +  +  + P++  Y  L+ GY +  +   A  L + M   GV+P
Sbjct: 721 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 780



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 162/343 (47%), Gaps = 7/343 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G       ++  +I+ G+ P ++ Y  LV  L++Q      +    K+    ++ + ++F
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIK------GYGNVGKPEESLKL 121
           N++I+        DEA+K+F+ M   G KP  +T+ T+++       +    KP   L+L
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQL 559

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
             LM ++K +  +    N+++      + IE+A      ++   ++PD VTYNT+   Y 
Sbjct: 560 FDLMQRNK-ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 618

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
                  AE++   ++     PN  T  I++   CK  +M+ A+R    M E    PN V
Sbjct: 619 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 678

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            +  L+  F    D +G  K    M+E G+ P +V++S I+D     G + +   IF   
Sbjct: 679 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 738

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           + A + PD+  ++IL +GY + G   +A  +   M + GV P+
Sbjct: 739 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 152/325 (46%), Gaps = 3/325 (0%)

Query: 113 GKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT 172
           G  +++L++    +Q   V P D  Y +L  +    + ++   +   K+   GI+P  V+
Sbjct: 160 GMVDKALEIFVYSTQLGVVIPQDSVYRML-NSLIGSDRVDLIADHFDKLCRGGIEPSGVS 218

Query: 173 -YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
            +  +  A    GE  +A      +     R    +C  ++ G   +  +E A R L  +
Sbjct: 219 AHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLV 277

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
            +    PN+V F +LI GF    + D       +ME+ G++PD++ +ST++D +  AG++
Sbjct: 278 LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML 337

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
           G   ++F   +  G++ D+ VFS     YV++G+   A  +   M   G+ PNVV +T +
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL 397

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I G C   ++  A  +Y ++ + G+ P++ TY +L+ G+ +         L + M + G 
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457

Query: 412 RPKKSTIQLVADSWRAIGLAREAKR 436
            P      ++ D     GL   A R
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMR 482



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 85/375 (22%), Positives = 168/375 (44%), Gaps = 11/375 (2%)

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCK-PTTSTY---NTLIKGYGNVGKPEESLKLLQLM 125
           ++  C   G VD+A++IF      G   P  S Y   N+LI G   V    +    L   
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLI-GSDRVDLIADHFDKLC-- 208

Query: 126 SQDKNVKPND-RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
                ++P+    +  ++ A   K  + +A +    ++  G +   V+ N + +  +   
Sbjct: 209 --RGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VD 265

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
           +   A ++L  + +    PN  T   +++G+CK G M+ A      M++  + P+L+ ++
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           +LI G+          K  +     GVK DVV FS+ +D +  +G +     ++  M+  
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           GI P++  ++IL KG  + G   +A  +   + K G+ P++V ++++I G+C    ++  
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
            ++YE M ++G  P++  Y  L+ G  +      A      M  + +R        + D 
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505

Query: 425 WRAIGLAREAKRVLK 439
           W  +    EA +V +
Sbjct: 506 WCRLNRFDEALKVFR 520



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 101/205 (49%), Gaps = 1/205 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++L    +  +A   FN LIE    P ++TY T++      +R      +   ++    
Sbjct: 579 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 638

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+++    +I+   ++ ++D A+++F  M + G KP   TY  L+  +      E S K
Sbjct: 639 GPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFK 698

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M Q+K + P+  +Y+I++   C +  ++EA N+ ++ + + + PD V Y  L R Y
Sbjct: 699 LFEEM-QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 757

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNE 205
            + G    A  +   M  N V+P++
Sbjct: 758 CKVGRLVEAALLYEHMLRNGVKPDD 782



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 89/172 (51%), Gaps = 5/172 (2%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  IF  L      P  +T T L+  L +       + + S + + G KP+++ +  ++
Sbjct: 625 EAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 684

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +  S+S +++ + K+F++M++ G  P+  +Y+ +I G    G+ +E+  +    + D  +
Sbjct: 685 DWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFH-QAIDAKL 743

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            P+   Y IL+R +C    + EA  +   M+ +G++PD    + L RA ++Y
Sbjct: 744 LPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD----DLLQRALSEY 791



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 10/149 (6%)

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVR-----AGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           FD + + GIEP      + A G+V       GE  KA      + + G    +V    V+
Sbjct: 204 FDKLCRGGIEPS----GVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVL 259

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
            G  +  +++ A  +   + + G  PN+ T+ TL+ G+ +  +  RA +L +VME++G+ 
Sbjct: 260 KGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE 318

Query: 413 PKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           P       + D +   G+     ++   A
Sbjct: 319 PDLIAYSTLIDGYFKAGMLGMGHKLFSQA 347


>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 642

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 206/425 (48%), Gaps = 5/425 (1%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGH-RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK 61
           +L+ +G+  + H ++  +  EG   P  ITY+ L+++  +  R  S + L  +++ + M+
Sbjct: 206 MLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQ 265

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P   ++  ++    + G V++A+ +F++MK +GC PT  TY  LIKG G  G+ EE+  L
Sbjct: 266 PTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDL 325

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA-Y 180
            + M  D  + P+    N L+        +EE  NV  +M      P  V+YNT+ +A +
Sbjct: 326 YKNMLTD-GLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALF 384

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                         +M+ + V P+E T  I++ GYCK   +E A+  L  M E    P  
Sbjct: 385 ESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCP 444

Query: 241 VVFNSLIKGFLDIKDSDGVDKALT-LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
             + SLI      K  +  ++    L E FG     V ++ ++  +   G + +  ++F+
Sbjct: 445 AAYCSLINALGKAKRYEAANELFKELKENFGNVSSRV-YAVMIKHFGKCGKLSEAVDLFN 503

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M   G  PD++ ++ L  G V+AG   +A S+L  M + G   ++     +++G+    
Sbjct: 504 EMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTG 563

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
             +RA+ ++E M   GI P+  TY TLL  +  A     A  L++ M++KG      T  
Sbjct: 564 VPRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYS 623

Query: 420 LVADS 424
            + D+
Sbjct: 624 SILDA 628



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/416 (22%), Positives = 187/416 (44%), Gaps = 2/416 (0%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDG-MKPDSILFNAMINACSESGNVDEAMKIFQK 89
           TY  L+  L   + +  +   I +V ++  +    ++ + ++ A   +  V +A+ +F +
Sbjct: 128 TYMALIRCLEEARLYGEMYRTIQEVVRNTYVSVGPVVLSELVKALGRAKMVSKALSVFYQ 187

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
            K   CKPT+STYN++I      G+ E+  ++   M  + +  P+  TY+ L+ ++    
Sbjct: 188 AKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLG 247

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
             + A  +  +M  + +QP    Y TL   Y + G+  +A  +  EM+     P   T  
Sbjct: 248 RNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYT 307

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            ++ G  K G +E+A      M    + P++V  N+L+     +   + +      M  +
Sbjct: 308 ELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTW 367

Query: 270 GVKPDVVTFSTIMDA-WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
              P VV+++T++ A + S   + +    FD M   G+ P    +SIL  GY +    +K
Sbjct: 368 RCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEK 427

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  +L  M + G  P    + ++I+    A + + A  +++++ E   N + + Y  ++ 
Sbjct: 428 ALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIK 487

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
            +G+  +   A +L   M+ +G  P       +       G+  EA  +L+  EE+
Sbjct: 488 HFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEEN 543



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/122 (20%), Positives = 62/122 (50%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ +V  G  +EA+ +   + E G    + ++  ++    R    +  + +   ++  G+
Sbjct: 521 MSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGI 580

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD + +N ++   + +G  +EA ++ ++MKD G +    TY++++   GN+   ++ + 
Sbjct: 581 KPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSILDAVGNMDHEKDDVS 640

Query: 121 LL 122
            L
Sbjct: 641 SL 642


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 183/379 (48%), Gaps = 37/379 (9%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F   + +   P + TY  L+A L + K+ +  L+L  + E+ G+  D   +
Sbjct: 280 GRLAEATQLFESTMTKESVPDVFTYNLLIA-LCKSKQLEEALTLFQEAEQGGVVLDVFTY 338

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +++A  ++G   +A+++F  M+ +GC P T  YN LI   G  GK +E+L+LL+ M++
Sbjct: 339 SYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNR 398

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K + P+ RTYNI++    S    E+A++    M      PD VTYNTL     +   T 
Sbjct: 399 -KGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTD 457

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +  EMQ N+  P+  T G ++    K G MEDA+    R+ ++   PN  ++N+LI
Sbjct: 458 EACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALI 517

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            GF                                     +G + K  E+F DM++    
Sbjct: 518 SGF-----------------------------------CRSGQVDKGYELFQDMIECSCF 542

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD   ++IL  G+ R G    A  +L  M + G  P +  +  +I     A +++ A ++
Sbjct: 543 PDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTL 602

Query: 368 YEKMCEIGINPNLKTYETL 386
           +++M   G NP+++TY  L
Sbjct: 603 FKEMIAKGFNPDMQTYSAL 621



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 204/441 (46%), Gaps = 36/441 (8%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGM-KPDSILFNAMINACSESGNVDEAMKIFQ 88
           +T T  + A  R     + + ++  + +    +PD++ F A ++   E   V++AM +F 
Sbjct: 54  VTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFD 113

Query: 89  KMKDS-GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
            M+++  C P    YNTLI GY   G  + +L + + + Q+ + KPN  +++ LV   C 
Sbjct: 114 DMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCK 173

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
            +   +A  V  +M+ +G++ D    NTL     + G   +A ++L  M  +    +  T
Sbjct: 174 MSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFT 233

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL---------------- 251
            GI+V+ +C+ G M +   F+   +      + V +N +I+GF+                
Sbjct: 234 YGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTM 293

Query: 252 ---DIKD------------SDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGK 293
               + D            S  +++ALTL +E    GV  DV T+S +MDA+  AG   K
Sbjct: 294 TKESVPDVFTYNLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAK 353

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
             E+F +M KAG  PD  V+++L     + G+  +A  +L  M + G+ P+   +  VI 
Sbjct: 354 ALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVID 413

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
              +  + ++A S +  M     +P++ TY TLL G  + ++   A +L   M+     P
Sbjct: 414 VLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMP 473

Query: 414 KKSTIQLVADSWRAIGLAREA 434
             +T   + D+    G   +A
Sbjct: 474 DLTTFGTLIDTLAKAGRMEDA 494



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 169/388 (43%), Gaps = 2/388 (0%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
            TY  LV A  R  +   + S +     DG    ++ +N +I      G + EA ++F+ 
Sbjct: 232 FTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFES 291

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
                  P   TYN LI       + EE+L L Q   Q   V  +  TY+ L+ A+    
Sbjct: 292 TMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQ-GGVVLDVFTYSYLMDAFGKAG 349

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
              +A  V Y M  +G  PD V YN L     + G+   A ++L +M    + P+ RT  
Sbjct: 350 RAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYN 409

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
           I++      G  E A  F   MK  +  P++V +N+L+ G   ++ +D        M+  
Sbjct: 410 IVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQAN 469

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
              PD+ TF T++D  + AG M    E    +VK G  P+ ++++ L  G+ R+G+  K 
Sbjct: 470 KCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKG 529

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             +   M +    P+ + +T ++ G+        AM + ++M   G  P L TY  L+  
Sbjct: 530 YELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRS 589

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKST 417
              A Q   A  L + M  KG  P   T
Sbjct: 590 LSMAGQVEDAYTLFKEMIAKGFNPDMQT 617



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/441 (23%), Positives = 197/441 (44%), Gaps = 10/441 (2%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
            L    +  +A  +F  ++  G +  +    TL+    R    +    L+  +       
Sbjct: 170 FLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACAR 229

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D+  +  ++NA   +G + E     +  +  GC  +   YN +I+G+   G+  E+ +L 
Sbjct: 230 DAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLF 289

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           +     ++V P+  TYN+L+ A C    +EEA  +  +    G+  D  TY+ L  A+ +
Sbjct: 290 ESTMTKESV-PDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGK 347

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G   +A ++ + MQ     P+     +++S   K+G +++A+  L  M    + P+   
Sbjct: 348 AGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRT 407

Query: 243 FNSLIKGFLDIKDSDG-VDKALT---LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           +N +I    D+  S G  +KA +   +M+     PDVVT++T+++         +  ++F
Sbjct: 408 YNIVI----DVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLF 463

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           D+M      PD+  F  L     +AG  + A      + K G  PN  ++  +ISG+C +
Sbjct: 464 DEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRS 523

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            ++ +   +++ M E    P+  TY  L+ G+        A ELLQ M  +G  P  +T 
Sbjct: 524 GQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATY 583

Query: 419 QLVADSWRAIGLAREAKRVLK 439
            ++  S    G   +A  + K
Sbjct: 584 NVLIRSLSMAGQVEDAYTLFK 604



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 115/249 (46%), Gaps = 5/249 (2%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N+L+     +GK  EA  +   +  +G  P   TY  ++  L+   R++   S    +++
Sbjct: 374 NVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKR 433

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
               PD + +N ++N   +    DEA  +F +M+ + C P  +T+ TLI      G+ E+
Sbjct: 434 RKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMED 493

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +L+    + +  +  PN   YN L+  +C    +++ + +   M+     PD++TY  L 
Sbjct: 494 ALEQSARLVKMGHA-PNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILV 552

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
             +++ G T  A ++L EM      P   T  +++      G +EDA      M     +
Sbjct: 553 LGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFN 612

Query: 238 PNLVVFNSL 246
           P++  +++L
Sbjct: 613 PDMQTYSAL 621



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 36/211 (17%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR---------------- 44
           +++L   G+  +A+  F  +    H P ++TY TL+  L + +R                
Sbjct: 412 IDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKC 471

Query: 45  ------FKSILSLISK-------------VEKDGMKPDSILFNAMINACSESGNVDEAMK 85
                 F +++  ++K             + K G  P+S ++NA+I+    SG VD+  +
Sbjct: 472 MPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYE 531

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +FQ M +  C P + TY  L+ G+   G    +++LLQ M ++ +  P   TYN+L+R+ 
Sbjct: 532 LFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHT-PALATYNVLIRSL 590

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
                +E+A+ +  +M+A G  PD  TY+ L
Sbjct: 591 SMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/321 (19%), Positives = 126/321 (39%), Gaps = 39/321 (12%)

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           ++ +G+  DA T   + +   + G T    ++L E++   V  +E TC   +  + + G+
Sbjct: 9   LLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAGD 68

Query: 221 MEDAMRFLYRMKE-------------------------------------LEVHPNLVVF 243
           ++ AM  L  M+                                       +  P++V +
Sbjct: 69  LDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAY 128

Query: 244 NSLIKGFLDIKDSD-GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           N+LI G+    D D  +D    L +E   KP+ V+F T++              +F +M+
Sbjct: 129 NTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEML 188

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
            AG++ D++V + L     R G  ++A  +L  M  +    +   +  +++  C A +M 
Sbjct: 189 GAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMH 248

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
              S  E     G   +   Y  ++ G+    +   A +L +    K   P   T  L+ 
Sbjct: 249 EVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI 308

Query: 423 DSWRAIGLAREAKRVLKSAEE 443
              ++  L  EA  + + AE+
Sbjct: 309 ALCKSKQL-EEALTLFQEAEQ 328


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 116/467 (24%), Positives = 217/467 (46%), Gaps = 39/467 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   GK  EA  +F  +++    P  +TY+ L+    +  + +    ++ K+EK+ +
Sbjct: 433 MDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHV 492

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I F+++IN  ++ G + +A+ + ++M      P T  Y  LI GY   G+ + +  
Sbjct: 493 PPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADD 552

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             + M + + ++ ++  ++IL+        ++EA +++  M + GI PD V Y +L   Y
Sbjct: 553 FCKEM-KSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGY 611

Query: 181 AQYGETYRAEQMLFEMQNNQVR----------------------------------PNER 206
            + G    A  ++ EM+   +R                                  P+  
Sbjct: 612 FKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCI 671

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   I++ YC +G  EDA+  L  MK   + PN V +N LI G       +  + AL  M
Sbjct: 672 TYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEM 731

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
                 P  +T   ++ A+S +    K  +I + +V +G+E  + V++ L   + R G  
Sbjct: 732 LVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMT 791

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           +KA+ +L  M K G+  ++V +  +I G+C    +++A+  Y +M   GI PN+ TY TL
Sbjct: 792 RKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTL 851

Query: 387 LWGYGEA----KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           L G   A    +     E+L+  M E+G+ P  +T  ++   +  +G
Sbjct: 852 LGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVG 898



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 203/431 (47%), Gaps = 26/431 (6%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           +TY T++    ++        L+S++ K G+  DSI  N ++      G V  A  +   
Sbjct: 163 VTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYN 222

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           + D G        NTLI GY   G   ++ +L++  S   +VK +  TYN L++A+C   
Sbjct: 223 LVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIE-NSWRSDVKIDIVTYNTLLKAFCKTG 281

Query: 150 SIEEA----------W---------NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
            +  A          W         +VV +     +QP  VTY TL  AY ++     + 
Sbjct: 282 DLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESH 341

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            +  +M  N + P+  TC  I+ G+C+ G + +A      M E+ + PN V + ++I   
Sbjct: 342 SLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSL 401

Query: 251 LDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
                S  V +A  L  +    G+  D+VT +T+MD     G   + +E+F+ ++K  + 
Sbjct: 402 F---KSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLA 458

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P+   +S L  GY + G+ + AE +L  M K  V PNV+ F+++I+G+     + +A+ +
Sbjct: 459 PNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDV 518

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
             +M +  + PN   Y  L+ GY +A +   A++  + M+ + +        ++ ++ + 
Sbjct: 519 LREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKR 578

Query: 428 IGLAREAKRVL 438
           +G   EA+ ++
Sbjct: 579 VGRMDEARSLI 589



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 201/439 (45%), Gaps = 12/439 (2%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG   +A  +   +++    P  I Y  L+    +            +++   ++  +++
Sbjct: 509 KGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVI 568

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F+ ++N     G +DEA  +   M   G  P    Y +LI GY   G    +L ++Q M 
Sbjct: 569 FDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEM- 627

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++KN++ +   YN L++        +  + V  +M+  G+ PD +TYNT+   Y   G+T
Sbjct: 628 KEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCSRMIELGLAPDCITYNTIINTYCIKGKT 686

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A  +L EM++  + PN  T  I++ G CK G +E A   L  M  +E  P  +    L
Sbjct: 687 EDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFL 746

Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           +K +     S+  DK L + E+    G++  +  ++T++  +   G+  K + + D+MVK
Sbjct: 747 VKAY---SRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVK 803

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA----V 359
            GI  D+  ++ L +GY      +KA    + M   G+ PN+  + T++ G  NA     
Sbjct: 804 RGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEE 863

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
            M+    +  +M E G+ PN  TY+ L+ GYG      +   L   M  KG  P   T  
Sbjct: 864 MMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYN 923

Query: 420 LVADSWRAIGLAREAKRVL 438
           ++   +   G   EA+ +L
Sbjct: 924 VLISDYAKSGKMIEARELL 942



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/432 (24%), Positives = 205/432 (47%), Gaps = 5/432 (1%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           E+H ++  +I  G  P ++T ++++    R  +      L  ++ + G+ P+ + +  +I
Sbjct: 339 ESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATII 398

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N+  +SG V EA  +  +M   G      T  T++ G   VGK +E+ ++ + + +  N+
Sbjct: 399 NSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILK-LNL 457

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PN  TY+ L+  +C    +E A  V+ KM    + P+ +T++++   YA+ G   +A  
Sbjct: 458 APNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVD 517

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           +L EM    V PN     I++ GY K G  + A  F   MK   +  + V+F+ L+    
Sbjct: 518 VLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLK 577

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
            +   D     +  M   G+ PD+V +++++D +   G       I  +M +  I  D+ 
Sbjct: 578 RVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVV 637

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++ L KG +R G+      + + M + G+ P+ + + T+I+ +C   K + A+ I  +M
Sbjct: 638 AYNALIKGLLRLGK-YDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEM 696

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
              GI PN  TY  L+ G  +     +AE  L  M      P   T + +    +A   +
Sbjct: 697 KSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLV---KAYSRS 753

Query: 432 REAKRVLKSAEE 443
            +A ++L+  E+
Sbjct: 754 EKADKILQIHEK 765



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 192/413 (46%), Gaps = 2/413 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +PTL+TYTTL+AA  +    +   SL  K+  +G+ PD +  ++++      G + EA  
Sbjct: 318 QPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAV 377

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +F++M + G  P   +Y T+I      G+  E+  L   M   + +  +  T   ++   
Sbjct: 378 LFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVV-RGISFDIVTCTTVMDGL 436

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                 +EA  V   ++   + P+ VTY+ L   Y + G+   AE +L +M+   V PN 
Sbjct: 437 FKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNV 496

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   I++GY K+G +  A+  L  M +  V PN +V+  LI G+    + D  D     
Sbjct: 497 ITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKE 556

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M+   ++   V F  +++     G M + + +  DM   GI+PDI  ++ L  GY + G 
Sbjct: 557 MKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGN 616

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
              A SI+  M++  +  +VV +  +I G     K      +  +M E+G+ P+  TY T
Sbjct: 617 QLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIELGLAPDCITYNT 675

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           ++  Y    +   A ++L  M+  G+ P   T  ++       G   +A+  L
Sbjct: 676 IINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESAL 728



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/439 (24%), Positives = 203/439 (46%), Gaps = 37/439 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA  +F  + E G  P  ++Y T++ +L +  R     +L S++   G+  D +  
Sbjct: 370 GKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTC 429

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +++   + G   EA ++F+ +      P   TY+ L+ GY  +GK E +  +LQ M +
Sbjct: 430 TTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEK 489

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE-- 185
           + +V PN  T++ ++  +  K  + +A +V+ +MV   + P+ + Y  L   Y + GE  
Sbjct: 490 E-HVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQD 548

Query: 186 ----------TYRAEQ-----------------------MLFEMQNNQVRPNERTCGIIV 212
                     + R E+                       ++ +M +  + P+      ++
Sbjct: 549 VADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLI 608

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
            GY KEGN   A+  +  MKE  +  ++V +N+LIKG L +   D      + M E G+ 
Sbjct: 609 DGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDP-RYVCSRMIELGLA 667

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           PD +T++TI++ +   G      +I ++M   GI P+   ++IL  G  + G  +KAES 
Sbjct: 668 PDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESA 727

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           L  M      P  +    ++  +  + K  + + I+EK+   G+  +L  Y TL+  +  
Sbjct: 728 LDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCR 787

Query: 393 AKQPWRAEELLQVMEEKGV 411
                +A+ +L  M ++G+
Sbjct: 788 LGMTRKAKVVLDEMVKRGI 806



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 199/430 (46%), Gaps = 58/430 (13%)

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVG----- 113
           G+  D I  N +I+   E+G + +A ++ +    S  K    TYNTL+K +   G     
Sbjct: 227 GVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRA 286

Query: 114 -----------KPEESLKLLQLMSQD--KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
                      K E+ LK   +++Q+  KN++P   TY  L+ A+C    +EE+ ++  K
Sbjct: 287 ESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKK 346

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER-------------- 206
           M+ +GI PD VT +++   + ++G+   A  +  EM    + PN                
Sbjct: 347 MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 406

Query: 207 ---------------------TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
                                TC  ++ G  K G  ++A      + +L + PN V +++
Sbjct: 407 VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSA 466

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           L+ G+  +   +  +  L  ME+  V P+V+TFS+I++ ++  G++ K  ++  +MV+  
Sbjct: 467 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 526

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + P+  V++IL  GY +AGE   A+     M+   +  + V+F  +++      +M  A 
Sbjct: 527 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEAR 586

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           S+   M   GI+P++  Y +L+ GY +      A  ++Q M+EK +R       +VA + 
Sbjct: 587 SLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIR-----FDVVAYNA 641

Query: 426 RAIGLAREAK 435
              GL R  K
Sbjct: 642 LIKGLLRLGK 651



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/473 (22%), Positives = 208/473 (43%), Gaps = 58/473 (12%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           + TL+       RF +  +  S +   G+ P    +N ++   + SG V +   ++  M 
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
             G  P   + N L+     VG  + +L  L+    +  V  ++ TYN ++  +C K  +
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALGYLR---NNDVVDIDNVTYNTVIWGFCQKGLV 178

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           ++ + ++ +MV  G+  D++T N L + Y + G    AE +++ + +  V  +      +
Sbjct: 179 DQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTL 238

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI-----------------K 254
           + GYC+ G M  A   +      +V  ++V +N+L+K F                    K
Sbjct: 239 IDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWK 298

Query: 255 DSD----------------------------------GVDKALTLMEEF---GVKPDVVT 277
           D D                                  GV+++ +L ++    G+ PDVVT
Sbjct: 299 DEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVT 358

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
            S+I+  +   G + +   +F +M + G++P+   ++ +     ++G   +A ++ + M 
Sbjct: 359 CSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMV 418

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
             G+  ++V  TTV+ G     K + A  ++E + ++ + PN  TY  LL GY +  +  
Sbjct: 419 VRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKME 478

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            AE +LQ ME++ V P   T   + + +   G+  +A  VL+   + R  MPN
Sbjct: 479 LAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQ-RNVMPN 530



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/472 (22%), Positives = 213/472 (45%), Gaps = 22/472 (4%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P + +   LV +L +       L  +     D +  D++ +N +I    + G VD+ 
Sbjct: 124 GVVPDVFSVNVLVHSLCKVGDLDLALGYLR--NNDVVDIDNVTYNTVIWGFCQKGLVDQG 181

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
             +  +M   G    + T N L+KGY  +G  + +  ++  +  D  V  +    N L+ 
Sbjct: 182 FGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLV-DGGVTKDVIGLNTLID 240

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE-------- 195
            +C    + +A  ++     S ++ D VTYNTL +A+ + G+  RAE +  E        
Sbjct: 241 GYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDE 300

Query: 196 --MQNNQV---------RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
             ++NN V         +P   T   +++ YCK   +E++     +M    + P++V  +
Sbjct: 301 DRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCS 360

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           S++ GF               M E G+ P+ V+++TI+++   +G + +   +   MV  
Sbjct: 361 SILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVR 420

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           GI  DI   + +  G  + G+ ++AE +  ++ K  + PN V ++ ++ G+C   KM+ A
Sbjct: 421 GISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELA 480

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             + +KM +  + PN+ T+ +++ GY +     +A ++L+ M ++ V P      ++ D 
Sbjct: 481 ELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDG 540

Query: 425 WRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQI 476
           +   G    A    K  +  R    N   +I + ++ R   +  + S  + +
Sbjct: 541 YFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDM 592



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 123/279 (44%), Gaps = 9/279 (3%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NIL+G     G   +A    + ++     PT IT+  LV A +R ++   IL +  K+  
Sbjct: 709 NILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVA 768

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G++    ++N +I      G   +A  +  +M   G      TYN LI+GY      E+
Sbjct: 769 SGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEK 828

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS----GIQPDAVTY 173
           +LK    M  D  + PN  TYN L+    +   +EE      K+V+     G+ P+A TY
Sbjct: 829 ALKTYSQMFVD-GIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATY 887

Query: 174 NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
           + L   Y + G   +   +  EM      P  +T  +++S Y K G M +A   L  +  
Sbjct: 888 DILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLT 947

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
               PN   ++ L  G+L++     +D++L    E  VK
Sbjct: 948 KGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIEVK 986



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 5/226 (2%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L+  G   +L  Y TL+    R    +    ++ ++ K G+  D + +NA+I       +
Sbjct: 766 LVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSH 825

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVG----KPEESLKLLQLMSQDKNVKPND 135
           V++A+K + +M   G  P  +TYNTL+ G  N G      EE+ KL+  M++ + + PN 
Sbjct: 826 VEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNE-RGLVPNA 884

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY+ILV  +    + ++   +  +M+  G  P   TYN L   YA+ G+   A ++L +
Sbjct: 885 ATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLND 944

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           +      PN  T  I+  G+       +  R L R  E+EV   L+
Sbjct: 945 LLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKKLLI 990



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/249 (18%), Positives = 109/249 (43%), Gaps = 2/249 (0%)

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
           + H  +  F +LI+ +L            + M   G+ P +  ++T++  ++++GL+ + 
Sbjct: 54  KTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQV 113

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
           + ++ DM+  G+ PD+   ++L     + G+   A   L +     V  + V + TVI G
Sbjct: 114 KLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDV--VDIDNVTYNTVIWG 171

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
           +C    + +   +  +M + G+  +  T   L+ GY        AE ++  + + GV   
Sbjct: 172 FCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKD 231

Query: 415 KSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFL 474
              +  + D +   GL  +A  +++++      +        +++  +  +L+ + S F 
Sbjct: 232 VIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFN 291

Query: 475 QIPGVVSSE 483
           +I G    E
Sbjct: 292 EILGFWKDE 300


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/442 (26%), Positives = 204/442 (46%), Gaps = 29/442 (6%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P ++TY  L++   R+ +      ++S +  +G  P+  +FN++I+A  +S +   A K+
Sbjct: 312 PNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKL 371

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE--SLKLLQLMSQ------DKNVKPNDRTY 138
           F+KM   GC+P    YN  I   G+V   EE  S  +L L+ +      D  V  N    
Sbjct: 372 FKKMIKCGCQPGYLVYNIFI---GSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNV 428

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           +   R  C     ++A+ ++ +M+  G  PD  TY+ +        +  +A  +  EM+ 
Sbjct: 429 SNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKR 488

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
           N + P+  T  I++  +CK G ++ A ++   M      PN+V + +LI  +L  K    
Sbjct: 489 NGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPV 548

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE----------- 307
            D+   +M   G KP+VVT++ ++D    AG + K  +I+  M +  IE           
Sbjct: 549 ADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARM-RGDIESSDMDKYFKLD 607

Query: 308 ------PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
                 P++  +  L  G  +A   ++A  +L +M  +G  PN +++  VI G+C   K+
Sbjct: 608 HNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKL 667

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           Q A  ++ KM E G +PNL TY + +    +  +     ++L  M E    P       +
Sbjct: 668 QDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEM 727

Query: 422 ADSWRAIGLAREAKRVLKSAEE 443
            D    IG   EA +++   EE
Sbjct: 728 VDGLCKIGKTDEAYKLMLKMEE 749



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/490 (25%), Positives = 205/490 (41%), Gaps = 73/490 (14%)

Query: 24  GHRPTLITYTTLVAALTRQKRF-----------------------------------KSI 48
           G++P+  TY  L+    R  +                                    +  
Sbjct: 206 GYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREA 265

Query: 49  LSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
             LI + E     PD++ +N M++   E+   +EAM I  +M+ S C P   TY  L+ G
Sbjct: 266 FDLIDEAED--FVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSG 323

Query: 109 YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP 168
               G+     ++L +M  +    PN   +N L+ A+C       A+ +  KM+  G QP
Sbjct: 324 CLRKGQLGRCKRILSMMITE-GCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQP 382

Query: 169 DAVTYNTLARAYAQYGETYRA------EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNME 222
             + YN    +     E   +      E+   EM +  V  N+          C  G  +
Sbjct: 383 GYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFD 442

Query: 223 DAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFS 279
            A + +  M      P+   ++ +I GFL   D+  V+KA +L EE    G+ P V T++
Sbjct: 443 QAFKIICEMMGKGFVPDDSTYSKVI-GFL--CDASKVEKAFSLFEEMKRNGIVPSVYTYT 499

Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
            ++D++  AGL+ + ++ FD+M+  G  P++  ++ L   Y++A +   A+ +   M   
Sbjct: 500 ILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLE 559

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM-------------------CEIGINPNL 380
           G  PNVV +T +I G C A ++++A  IY +M                   CE    PN+
Sbjct: 560 GCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCE---GPNV 616

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            TY  L+ G  +A +   A ELL  M   G  P +     V D +  IG  ++A+ V   
Sbjct: 617 ITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTK 676

Query: 441 AEEDRQSMPN 450
             E R   PN
Sbjct: 677 MSE-RGYSPN 685



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/494 (23%), Positives = 213/494 (43%), Gaps = 58/494 (11%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG+      I + +I EG  P    + +L+ A  + + +     L  K+ K G +P  ++
Sbjct: 327 KGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLV 386

Query: 67  FNAMINA-CSE----------------------------------------SGNVDEAMK 85
           +N  I + CS                                         +G  D+A K
Sbjct: 387 YNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFK 446

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           I  +M   G  P  STY+ +I    +  K E++  L + M ++  + P+  TY IL+ ++
Sbjct: 447 IICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRN-GIVPSVYTYTILIDSF 505

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C    I++A     +M+  G  P+ VTY  L  AY +  +   A+++   M     +PN 
Sbjct: 506 CKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNV 565

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMK-ELEVH---------------PNLVVFNSLIKG 249
            T   ++ G+CK G +E A +   RM+ ++E                 PN++ + +L+ G
Sbjct: 566 VTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDG 625

Query: 250 FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
                      + L  M   G +P+ + +  ++D +   G +   QE+F  M + G  P+
Sbjct: 626 LCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPN 685

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
           ++ +S       +         +L+ M +    PNVV++T ++ G C   K   A  +  
Sbjct: 686 LYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLML 745

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           KM E G NPN+ TY  ++ G+G++ +  +  EL + M  KG  P   T +++ +   + G
Sbjct: 746 KMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNG 805

Query: 430 LAREAKRVLKSAEE 443
           L  EA ++L   ++
Sbjct: 806 LLDEAYKLLDEMKQ 819



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 174/384 (45%), Gaps = 20/384 (5%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G GK  +A  I   ++ +G  P   TY+ ++  L    + +   SL  +++++G+ P 
Sbjct: 435 LCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPS 494

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +  +I++  ++G + +A K F +M   GC P   TY  LI  Y    +   + +L +
Sbjct: 495 VYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFE 554

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           +M  +   KPN  TY  L+   C    IE+A  +  +M       D   Y  L       
Sbjct: 555 MMLLE-GCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLD------ 607

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                         NN   PN  T G +V G CK   +++A   L  M      PN +V+
Sbjct: 608 -------------HNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVY 654

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           +++I GF  I       +  T M E G  P++ T+S+ +D       +    ++   M++
Sbjct: 655 DAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLE 714

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
               P++ +++ +  G  + G+  +A  ++  M + G +PNVV +T +I G+  + K+++
Sbjct: 715 NSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQ 774

Query: 364 AMSIYEKMCEIGINPNLKTYETLL 387
            + ++  MC  G  PN  TY  L+
Sbjct: 775 CLELFRDMCSKGCAPNFITYRVLI 798



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/432 (23%), Positives = 196/432 (45%), Gaps = 20/432 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +  L    K  +A  +F  +   G  P++ TYT L+ +  +    +       ++   G 
Sbjct: 467 IGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGC 526

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + + A+I+A  ++  +  A ++F+ M   GCKP   TY  LI G+   G+ E++ +
Sbjct: 527 TPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQ 586

Query: 121 LLQLM-------SQDKNVK--------PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
           +   M         DK  K        PN  TY  LV   C  N ++EA  ++  M+A G
Sbjct: 587 IYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHG 646

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
            +P+ + Y+ +   + + G+   A+++  +M      PN  T    +    K+  ++  +
Sbjct: 647 CEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVL 706

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           + L +M E    PN+V++  ++ G   I  +D   K +  MEE G  P+VVT++ ++D +
Sbjct: 707 KVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGF 766

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
             +G + +C E+F DM   G  P+   + +L       G   +A  +L  M++     ++
Sbjct: 767 GKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHI 826

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
           +    +I G+  + +   ++ + +++ E    P    Y  L+  Y +A    R E  L +
Sbjct: 827 LSHRKIIEGF--SQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAG---RLEVALDL 881

Query: 406 MEEKGVRPKKST 417
           +EE    P  + 
Sbjct: 882 LEEISSSPSHAV 893



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/437 (23%), Positives = 190/437 (43%), Gaps = 38/437 (8%)

Query: 49  LSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
           L  + +++ D  +    L N ++  C  +G  + A++   ++KD G KP+ +TYN LI+ 
Sbjct: 161 LKFLMEIKDDDHELLRRLLNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQV 220

Query: 109 YGNVGKPEESL--------------------------------KLLQLMSQDKNVKPNDR 136
           +    K + +                                 +   L+ + ++  P+  
Sbjct: 221 FLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAEDFVPDTV 280

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
            YN +V   C  +  EEA +++++M +S   P+ VTY  L     + G+  R +++L  M
Sbjct: 281 FYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMM 340

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
                 PN      ++  YCK  +   A +   +M +    P  +V+N  I      ++ 
Sbjct: 341 ITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQ 400

Query: 257 ------DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
                 D V+KA + M + GV  + V  S        AG   +  +I  +M+  G  PD 
Sbjct: 401 PSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDD 460

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             +S +      A + +KA S+   M++ G+ P+V  +T +I  +C A  +Q+A   +++
Sbjct: 461 STYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDE 520

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M   G  PN+ TY  L+  Y +AKQ   A+EL ++M  +G +P   T   + D     G 
Sbjct: 521 MLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQ 580

Query: 431 AREAKRVLKSAEEDRQS 447
             +A ++      D +S
Sbjct: 581 IEKACQIYARMRGDIES 597


>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
 gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
          Length = 425

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 180/359 (50%), Gaps = 6/359 (1%)

Query: 3   ILVGKGKPHEAHYI---FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG 59
           ++   G+    H +   F  L + G +P   TY  ++ +L +       + L+ K+ K G
Sbjct: 20  VIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLDKMIKTG 79

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           ++PD++L N +++   ++  +DEA K+F  MK  GC     TY  LI+  G   + EE+ 
Sbjct: 80  LEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEAT 139

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            L   M +++   P+   Y  ++  +C    IE A  V+ KM+   + PD  T N+L  A
Sbjct: 140 LLFDEM-EERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITA 198

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
            ++ G T  A ++   M+ + V  N  +   ++    K G +  A +F+  M+   + PN
Sbjct: 199 VSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPN 258

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            + FN+LI      K +    K L  M   G+ PDV T++ +++A++ AG MGK  E+F 
Sbjct: 259 SITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFG 318

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV--ISGWC 356
           DM KAG   ++  +++L    V+AG  Q A  I   M+K G+ P+ +  T +  ++G C
Sbjct: 319 DMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQQLAGKC 377



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 171/370 (46%), Gaps = 4/370 (1%)

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           ++ NA+I A   S  + + M  FQ++   G KP   TY  +I+     G    +++LL  
Sbjct: 15  LVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLDK 74

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M +   ++P+    N+++      N ++EA  +   M + G   D  TY  L R+  +  
Sbjct: 75  MIK-TGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCK 133

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
               A  +  EM+     P+      ++  YCK G +E AM  L +M +  + P+    N
Sbjct: 134 RDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLN 193

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           SLI        ++   +    M++ GV  + V+F+ ++D    AG +G   +  D+M   
Sbjct: 194 SLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEAR 253

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           GI+P+   F+ L     RA    +A  +L  MR  G+ P+V  +T +I  +  A  M +A
Sbjct: 254 GIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKA 313

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST---IQLV 421
             ++  M + G + N+ TY  L+    +A +   A ++   M++KG+ P   T   +Q +
Sbjct: 314 FEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQQL 373

Query: 422 ADSWRAIGLA 431
           A   +  G++
Sbjct: 374 AGKCKLSGIS 383



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 111/219 (50%), Gaps = 3/219 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++I    G+   A  +   ++++   P   T  +L+ A++R  R +    +  +++K G+
Sbjct: 161 IDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGV 220

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             +++ FNAM++ C ++G V  A +   +M+  G KP + T+NTLI   G      E+ K
Sbjct: 221 AVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYK 280

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +LQ M +   + P+  TY  ++ A+    ++ +A+ +   M  +G   + VTYN L  A 
Sbjct: 281 VLQEM-RSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDAL 339

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGII--VSGYCK 217
            + G    A  + F+M+   + P+  T  ++  ++G CK
Sbjct: 340 VKAGRYQDARDIYFDMKKKGILPDAITATVLQQLAGKCK 378



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/287 (22%), Positives = 126/287 (43%), Gaps = 17/287 (5%)

Query: 164 SGIQPDAVTYNTLAR--AYAQYGETYRAEQMLFEMQ---NNQVRPNERTCGIIVSGYCKE 218
           + IQ     Y+ L      A YG + R  +++ E Q    +  +PN  T   ++    K 
Sbjct: 3   AAIQDTPCRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKA 62

Query: 219 GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTF 278
           GN+  AM  L +M +  + P+ ++ N ++ G       D   K    M+  G   D  T+
Sbjct: 63  GNVVLAMELLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTY 122

Query: 279 STIMDAWSSAGLMGKCQE------IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           + ++ +      +G+C+       +FD+M + G  P    ++ +   Y +AG  + A  +
Sbjct: 123 AILIRS------LGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVV 176

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
           L  M    + P+     ++I+      + + A  I+E+M + G+  N  ++  +L   G+
Sbjct: 177 LKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGK 236

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           A +   A + +  ME +G++P   T   + +       A EA +VL+
Sbjct: 237 AGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQ 283



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/223 (21%), Positives = 101/223 (45%), Gaps = 6/223 (2%)

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH---PNLVVFNSLIK 248
           ML  +Q+   R +      +++ Y +   +   M      +EL+ H   PN   +  +I+
Sbjct: 1   MLAAIQDTPCRYHVLVSNAVIAAYGRSSRIHKVMD---EFQELDKHGSKPNAYTYKCVIQ 57

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
             +   +     + L  M + G++PD +  + ++D    A +M +  ++F  M   G   
Sbjct: 58  SLVKAGNVVLAMELLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPA 117

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D + ++IL +   R    ++A  +   M + G  P+   +T VI  +C A +++ AM + 
Sbjct: 118 DDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVL 177

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           +KM +  + P+  T  +L+       +   A E+ + M++ GV
Sbjct: 178 KKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGV 220



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 78/177 (44%)

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           L  +++   +  V+  + ++ A+  +  + K  + F ++ K G +P+ + +  + +  V+
Sbjct: 2   LAAIQDTPCRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVK 61

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           AG    A  +L  M K G+ P+ ++   V+ G   A  M  A  ++  M  +G   +  T
Sbjct: 62  AGNVVLAMELLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYT 121

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           Y  L+   G  K+   A  L   MEE+G  P       V D +   G    A  VLK
Sbjct: 122 YAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLK 178



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 47/125 (37%)

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
            Y R+    K       + K+G  PN   +  VI     A  +  AM + +KM + G+ P
Sbjct: 23  AYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLDKMIKTGLEP 82

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           +      +L G G+A     A +L   M+  G      T  ++  S        EA  + 
Sbjct: 83  DTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLF 142

Query: 439 KSAEE 443
              EE
Sbjct: 143 DEMEE 147


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 191/387 (49%), Gaps = 4/387 (1%)

Query: 10  PHEAHYIFNCLIEEGH-RPTLITYTTLVAALTRQKRFKSILSL--ISKVEKDGMKPDSIL 66
           P +A  +F  +++E   R T+ ++ +++  + ++  F   L         K  + P+ + 
Sbjct: 115 PEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLS 174

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           FN +I A  + G VD A+++F++M    C+P   TY TL+ G     + +E++ LL  M 
Sbjct: 175 FNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEM- 233

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           Q +   P+  T+N+L+   C K  +     +V  M   G  P+ VTYNT+       G+ 
Sbjct: 234 QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL 293

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
            +A  +L  M  ++  PN+ T G +++G  K+G   D +  L  ++E   H N   +++L
Sbjct: 294 DKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTL 353

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G    + S+        M E G +P++V +S ++D     G + + +EI  +MV  G 
Sbjct: 354 ISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGC 413

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+   +S L KG+ + G  QKA  +   M K    PN + ++ +I G C   K++ AM 
Sbjct: 414 TPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMM 473

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEA 393
           ++  M   G+ P++  Y +++ G   A
Sbjct: 474 MWTHMLGRGLRPDVVAYSSMIHGLCNA 500



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 115/473 (24%), Positives = 222/473 (46%), Gaps = 19/473 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLI--EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           +N+++ +G  H A   + C +  +    P ++++  ++ A+ +       + +  ++   
Sbjct: 142 LNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQ 201

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
             +PD   +  +++   +   +DEA+ +  +M+  GC P++ T+N LI G    G     
Sbjct: 202 KCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRV 261

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
            KL+  M   K   PN+ TYN ++   C K  +++A +++ +MVAS   P+ VTY TL  
Sbjct: 262 TKLVDNMFL-KGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLIN 320

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
              + G +     +L  ++      NE     ++SG  KE   E+AM    +M E    P
Sbjct: 321 GLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQP 380

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           N+VV+++LI G       D   + L  M   G  P+  T+S+++  +   G   K   ++
Sbjct: 381 NIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVW 440

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
            +M K    P+   +S+L  G    G+ ++A  + T M   G+ P+VV ++++I G CNA
Sbjct: 441 KEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNA 500

Query: 359 VKMQRAMSIY-EKMC-EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
             ++  + ++ E +C E    P++ TY  LL    +      A +LL  M ++G  P   
Sbjct: 501 GSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLI 560

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSAS 469
           T  +  ++ R           L   ++ R+ +    DE+ V  +H++Q +  +
Sbjct: 561 TCNIFLNALR---------EKLNPPQDGREFL----DELVVR-LHKRQRIVGA 599



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 177/406 (43%), Gaps = 41/406 (10%)

Query: 85  KIFQKMKDSGC-KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           +IF+     G  K   ST+ +LI+ Y N G      ++   M +++ V   ++ + ++ R
Sbjct: 49  QIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFI-EKNFILVFR 107

Query: 144 AWCSKNSIEEAWNVVYKMV--------------------------------------ASG 165
           A+   +  E+A  +  +MV                                       + 
Sbjct: 108 AYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTN 167

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           I P+ +++N + +A  + G   RA ++  EM   +  P+  T   ++ G CKE  +++A+
Sbjct: 168 ISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAV 227

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
             L  M+     P+ V FN LI G     D   V K +  M   G  P+ VT++TI++  
Sbjct: 228 LLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGL 287

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
              G + K   + D MV +   P+   +  L  G V+ G       +L+S+ + G H N 
Sbjct: 288 CLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANE 347

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
             ++T+ISG     K + AM +++KM E G  PN+  Y  L+ G     +   A+E+L  
Sbjct: 348 YAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCE 407

Query: 406 MEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
           M  KG  P   T   +   +   G +++A RV K   ++   +PN+
Sbjct: 408 MVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKN-NCVPNE 452


>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1385

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 188/384 (48%), Gaps = 17/384 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  +GK   A  +   + E GH PT +TY TL+    ++ R+K+   LI  +   G+
Sbjct: 186 LNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAMASKGI 245

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D   +N +I+         +   I ++M+ +   P   TYNTLI G    GK   + K
Sbjct: 246 AADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATK 305

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + MS   N+ PN  TYN L+   CS  +IEEA  +   MV+ G++P+ VTY  L    
Sbjct: 306 VFEEMSL-CNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGI 364

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           +++ +      +L  M+ + VR    +   ++ G CK G +E+A++ L  M ++ V P++
Sbjct: 365 SKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDI 424

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V F+ L+ GFL                + G+ P+ V  ST++  +   G + +    +  
Sbjct: 425 VTFSVLVNGFL----------------KTGLVPNRVLHSTLIYNYCKMGNLKEALNAYAV 468

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M ++G   D    S+L   + R G  ++AE  +  M + G+ P+ V F  +I  + N+  
Sbjct: 469 MNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGD 528

Query: 361 MQRAMSIYEKMCEIGINPNLKTYE 384
             +A S+++KM  +G  P+  TYE
Sbjct: 529 ALKAFSVFDKMNSLGHLPSQFTYE 552



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 196/415 (47%), Gaps = 17/415 (4%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P++ T   ++ +L + +      S   ++  + + P+   FN ++NA  E G    A
Sbjct: 139 GFSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIANRVSPNVATFNILLNALCERGKFKSA 198

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
             + +KM ++G  PT  TYNTL+  Y   G+ + + +L+  M+  K +  +  TYN+L+ 
Sbjct: 199 GVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAMAS-KGIAADVCTYNVLID 257

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C K+   + + ++ +M  + + P+ +TYNTL     + G+   A ++  EM    + P
Sbjct: 258 DLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLP 317

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  T   ++ G+C  GN+E+A+R    M    + PN V + +L+ G         V   L
Sbjct: 318 NSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVL 377

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M   GV+   ++++T++D     GL+ +  ++ DDM+K  + PDI  FS+L  G++  
Sbjct: 378 ERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFL-- 435

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
                         K G+ PN V+ +T+I  +C    ++ A++ Y  M + G   +  T 
Sbjct: 436 --------------KTGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTS 481

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
             L+  +    +   AE  +  M   G+ P   T   + D++   G A +A  V 
Sbjct: 482 SVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVF 536



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/404 (23%), Positives = 188/404 (46%), Gaps = 2/404 (0%)

Query: 27   PTLITYTTLVAALTRQKRFKSILSLISK-VEKDGMKPDSILFNAMINACSESGNVDEAMK 85
            P   TYT+L+A L R+ +    L L  + +EK  + P+  ++ ++++   + G+   A+ 
Sbjct: 616  PDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALY 675

Query: 86   IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
            +F+ M + G +P    +N L+  Y   GK  +   +L  M + +++  N  TYNIL+  +
Sbjct: 676  MFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTM-RSRSLCFNLATYNILLHGY 734

Query: 146  CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
              ++ +     +  +M+  G  PD +T+++L   Y + G    A + L ++     + + 
Sbjct: 735  SKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDC 794

Query: 206  RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
             T  ++VS  C+   ++ A   + ++  L V PN+  +NSL  GF+     D     L  
Sbjct: 795  FTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHA 854

Query: 266  MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
            + E G  P    F+T++      G +    E+ D+M   G+       S + +G  R+ +
Sbjct: 855  LLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRK 914

Query: 326  PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
              +A  IL  M +  + P V  FTT++  +C    + +A+ +   M +  +  ++  Y  
Sbjct: 915  TDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNV 974

Query: 386  LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
            L+ G         A +L + ME++ + P  S   ++ DS+   G
Sbjct: 975  LISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTG 1018



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/352 (23%), Positives = 170/352 (48%), Gaps = 1/352 (0%)

Query: 4    LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            L+ +G    A Y+F  ++ EG +P  I +  L+   +R+ +   +  ++S +    +  +
Sbjct: 664  LLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFN 723

Query: 64   SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
               +N +++  S+   +    K++ +M   G  P   T+++LI GY   G  + ++K L+
Sbjct: 724  LATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLR 783

Query: 124  LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
             ++ +   K +  T N+LV   C +N I+ A+++V ++   G+ P+  TYN+L   + + 
Sbjct: 784  KITVE-GFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRT 842

Query: 184  GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                 A  +L  +  N   P  +    ++ G C+ GN++ AM     MK L V    V  
Sbjct: 843  CSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAM 902

Query: 244  NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            +++I+G    + +D   + L +M E  + P V TF+T+M  +   G + K  E+   M +
Sbjct: 903  SAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQ 962

Query: 304  AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
              ++ D+  +++L  G    G+ Q A  +   M +  + PN  ++  +I  +
Sbjct: 963  CHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSF 1014



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 154/327 (47%), Gaps = 5/327 (1%)

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
           +F+ +I  C     V +A++ F+ M   G  P+  T N ++   G++ K  E        
Sbjct: 111 VFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVL---GSLVKDREVDLFWSFF 167

Query: 126 SQ--DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            +     V PN  T+NIL+ A C +   + A  ++ KM  +G  P AVTYNTL   Y + 
Sbjct: 168 KEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKK 227

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A +++  M +  +  +  T  +++   C++         L RM++  V+PN + +
Sbjct: 228 GRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITY 287

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+LI G +         K    M    + P+ VT++T++    S G + +   + D MV 
Sbjct: 288 NTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVS 347

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ P+   +  L  G  +  +     S+L  MR  GV    + +TT+I G C    ++ 
Sbjct: 348 HGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEE 407

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGY 390
           A+ + + M ++ ++P++ T+  L+ G+
Sbjct: 408 AVQLLDDMLKVSVSPDIVTFSVLVNGF 434



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/418 (22%), Positives = 177/418 (42%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  +F+ +   GH P+  TY  L+  L            + +         S  +
Sbjct: 527 GDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFY 586

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N M+   S SGN+  A+ +  +M  +   P + TY +LI G    GK   +L L     +
Sbjct: 587 NTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIE 646

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              + PN   Y  LV     +   + A  +   M+  G+QPDA+ +N L   Y++ G+  
Sbjct: 647 KGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMS 706

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +   +L  M++  +  N  T  I++ GY K   M    +    M      P+ + ++SLI
Sbjct: 707 KVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLI 766

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G+      D   K L  +   G K D  T + ++        +    ++   +   G+ 
Sbjct: 767 LGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVT 826

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P++  ++ L  G+VR     +A  IL ++ + G  P    FTT+I G C    ++ AM +
Sbjct: 827 PNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMEL 886

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            ++M  +G++        ++ G   +++   A  +L +M E  + P  +T   +  ++
Sbjct: 887 QDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTY 944



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/437 (22%), Positives = 197/437 (45%), Gaps = 16/437 (3%)

Query: 25   HRPTLITYT-------TLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSES 77
            HRP+ I Y        T++   +R     + ++L+ ++  +   PDS  + ++I      
Sbjct: 572  HRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRK 631

Query: 78   GNVDEAMKIFQKMKDSGC-KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
            G +  A+ +  +  + G   P  + Y +L+ G    G  + +L + + M  ++ V+P+  
Sbjct: 632  GKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDM-LNEGVQPDAI 690

Query: 137  TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
             +N+L+  +  K  + +  +++  M +  +  +  TYN L   Y++     R  ++  EM
Sbjct: 691  AFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEM 750

Query: 197  QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD---I 253
              +   P+  T   ++ GYCK G+++ A++FL ++       +    N L+    +   I
Sbjct: 751  IIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEI 810

Query: 254  KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
            K +  + K L ++   GV P+V T++++ + +       + + I   +++ G  P    F
Sbjct: 811  KMAFDLVKQLNML---GVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQF 867

Query: 314  SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
            + L +G  R G  + A  +   M+  GV    V  + +I G   + K   A  I   M E
Sbjct: 868  TTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLE 927

Query: 374  IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
            + I P + T+ TL+  Y +     +A EL  VME+  V+   +   ++     A G  + 
Sbjct: 928  MQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQA 987

Query: 434  AKRVLKSAEEDRQSMPN 450
            A ++ +  E+ R   PN
Sbjct: 988  AFKLYEEMEQ-RDIWPN 1003



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 129/315 (40%)

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           LM        N   +++L+R    +N + +A      M   G  P   T N +  +  + 
Sbjct: 98  LMETYPFCNSNPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKD 157

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E         EM  N+V PN  T  I+++  C+ G  + A   L +M E    P  V +
Sbjct: 158 REVDLFWSFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTY 217

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+L+  +          + +  M   G+  DV T++ ++D         K   I   M K
Sbjct: 218 NTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRK 277

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
             + P+   ++ L  G V+ G+   A  +   M    + PN V + T+I G C+   ++ 
Sbjct: 278 NMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEE 337

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+ + + M   G+ PN  TY  LL G  +  Q      +L+ M   GVR    +   + D
Sbjct: 338 ALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMID 397

Query: 424 SWRAIGLAREAKRVL 438
                GL  EA ++L
Sbjct: 398 GLCKNGLLEEAVQLL 412



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 99/231 (42%), Gaps = 9/231 (3%)

Query: 24   GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
            G  P + TY +L     R   F     ++  + ++G  P    F  +I      GNV  A
Sbjct: 824  GVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGA 883

Query: 84   MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            M++  +MK  G        + +I+G     K +E+ ++L +M  +  + P   T+  L+ 
Sbjct: 884  MELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIM-LEMQIIPTVATFTTLMH 942

Query: 144  AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             +C + ++ +A  +   M    ++ D   YN L       G+   A ++  EM+   + P
Sbjct: 943  TYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWP 1002

Query: 204  NERTCGIIVSGYCKEGNM----EDAMRFLYRMKE---LEVHPNLVVFNSLI 247
            N     +++  +   GN     E  +R L R +E   L++H  + + N L+
Sbjct: 1003 NTSIYIVLIDSFLCTGNYIVESEKLLRDL-RTRELMSLDLHGGIEILNELL 1052



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 7/127 (5%)

Query: 9    KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
            K  EA  I   ++E    PT+ T+TTL+    ++      L L S +E+  +K D   +N
Sbjct: 914  KTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYN 973

Query: 69   AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK-PEESLKLL----- 122
             +I+     G++  A K++++M+     P TS Y  LI  +   G    ES KLL     
Sbjct: 974  VLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTGNYIVESEKLLRDLRT 1033

Query: 123  -QLMSQD 128
             +LMS D
Sbjct: 1034 RELMSLD 1040


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 125/502 (24%), Positives = 232/502 (46%), Gaps = 54/502 (10%)

Query: 10  PHEAHYIFNCLIEEGH-RPTLITYTTLVAALTRQKRFKSILSLISKV----EKDGMKPDS 64
           P +A  +F+ +  E H + T+ ++ T++  + ++  F   L   + V        ++P+ 
Sbjct: 116 PQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNG 175

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           + FN +I A    GNVD+A+++F+ M D  C     TY+TL+ G  N G+ +E++ LL  
Sbjct: 176 LSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDE 235

Query: 125 MSQD----------------------------------KNVKPNDRTYNILVRAWCSKNS 150
           M  +                                  K   PN+ TYN LV   C K  
Sbjct: 236 MQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGK 295

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           +++A +++ +MVA+   P+ +T+ TL   + ++G      ++L  ++    R NE +   
Sbjct: 296 LDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSS 355

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++SG  KEG  E  M+    M E    PN +V+++LI G       D   + L  M+  G
Sbjct: 356 LISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKG 415

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
             P+  T+S++M  +  AG + K   ++ +M           +SIL  G  + G+ ++A 
Sbjct: 416 HTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEAL 475

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM-CE-IGINPNLKTYETLLW 388
            +   M   G+  +VV ++++I G+CNA  +++ M ++ +M C    + P++ TY  LL 
Sbjct: 476 IVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLN 535

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSM 448
            +       RA ++L  M ++G  P   T  +   + R           +   ++ R+ +
Sbjct: 536 AFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLR---------DNMDPPQDGREFL 586

Query: 449 PNKKDEIAVESIHRKQNLSASN 470
               DE+ V  I R++ + ASN
Sbjct: 587 ----DELVVRLIKRQRTVGASN 604



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 157/355 (44%), Gaps = 4/355 (1%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F ++I   S S +     ++  +MK         ++  + K YG    P+++L L   M 
Sbjct: 68  FYSLIENFSNSLDFTSLEQLLHQMKCENRVFIEKSFIIMFKAYGKAHLPQKALDLFHRMG 127

Query: 127 QD----KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
            +    + VK  +   N++++  C   ++E   +V+     S IQP+ +++N + +A  +
Sbjct: 128 AEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCR 187

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G   +A ++   M +     +  T   ++ G C EG +++A+  L  M+     PN V 
Sbjct: 188 VGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVA 247

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           FN LI       D     K +  M   G  P+ VT+++++      G + K   + + MV
Sbjct: 248 FNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMV 307

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
                P+   F  L  G+V+ G       +L S+ + G   N   ++++ISG     K +
Sbjct: 308 ANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGE 367

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             M ++++M E G  PN   Y  L+ G     +P  A+E L  M+ KG  P   T
Sbjct: 368 HGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFT 422


>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 178/371 (47%), Gaps = 17/371 (4%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P + T   L+ +     R     S+++K+ K G +PD   F  +I      G + EA
Sbjct: 75  GVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEA 134

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +F KM D G +P   TY TLI G   VG    +++LL+ M Q  N +P+   Y  ++ 
Sbjct: 135 LHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ-GNCQPDVVIYTSIID 193

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           + C    + EA+N+  +MV  GI PD  TY +L  A     E      +L +M N+++ P
Sbjct: 194 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 253

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +      +V   CKEG + +A   +  M +  V P++V + +L+ G     + D   K  
Sbjct: 254 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVF 313

Query: 264 TLMEEFGVKPDVVTFSTIMDAW-SSAGLMGKCQEIF------DDMVKAGIEPDIHVFSIL 316
            +M   G  PDV++++T+++A     G +   QE+        D VK G         ++
Sbjct: 314 DMMVRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGG------AVEVI 367

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
            K  ++  E  K  ++L  M    + PNVV+F+TV+   C   K+  A  + + M + G+
Sbjct: 368 RKDKMKLFE--KGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGV 425

Query: 377 NPN-LKTYETL 386
            PN +K ++T+
Sbjct: 426 EPNAVKVFDTM 436



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 187/378 (49%), Gaps = 17/378 (4%)

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN--VKPNDRT 137
           +D+A+  F ++      P+   +  L+    ++ K +    +L L +Q  +  V PN  T
Sbjct: 26  LDDALSSFNRLLHMHPPPSIVDFAKLLT---SIAKMKHYSTVLSLSTQMDSFGVPPNVYT 82

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
            NIL+ ++C  N +  A++V+ K++  G QPD  T+ TL R     G+   A  +  +M 
Sbjct: 83  LNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI 142

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
           +   +PN  T G +++G CK GN   A+R L  M++    P++V++ S+I      KD  
Sbjct: 143 DEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSL--CKDRQ 200

Query: 258 GVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
            V +A  L  +    G+ PD+ T+++++ A  +         + + MV + I PD+ +FS
Sbjct: 201 -VTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFS 259

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            +     + G+  +A  I+  M + GV P+VV +TT++ G C   +M  A+ +++ M   
Sbjct: 260 TVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRK 319

Query: 375 GINPNLKTYETLL-WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV-ADSWRAIGLAR 432
           G  P++ +Y TL+  G  +       +E++ +++E     K   ++++  D  +      
Sbjct: 320 GFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLF---- 375

Query: 433 EAKRVLKSAEEDRQSMPN 450
           E  R L +   + + MPN
Sbjct: 376 EKGRTLLNEMVNSKIMPN 393



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 98/431 (22%), Positives = 183/431 (42%), Gaps = 70/431 (16%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           FN L+     P+++ +  L+ ++ + K + ++LSL ++++  G+ P+    N +IN+   
Sbjct: 33  FNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCH 92

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
              V  A  +  K+   G +P  +T+ T                                
Sbjct: 93  LNRVGFAFSVLAKILKLGHQPDPTTFTT-------------------------------- 120

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
               L+R  C +  I EA ++  KM+  G QP+ VTY TL     + G T  A ++L  M
Sbjct: 121 ----LIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM 176

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
           +    +P+      I+   CK+  + +A     +M    + P++  + SL+    ++ + 
Sbjct: 177 EQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEW 236

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
             V   L  M    + PDVV FST++DA    G + +  EI D M++ G+EPD+  ++ L
Sbjct: 237 KHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTL 296

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS----------------------- 353
             G+    E  +A  +   M + G  P+V+ +TT+I+                       
Sbjct: 297 MDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKETP 356

Query: 354 ----GWCNAVKMQRAMSIYEK-------MCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
               G    V  +  M ++EK       M    I PN+  + T++    +  +   A ++
Sbjct: 357 DAVKGGAVEVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDV 416

Query: 403 LQVMEEKGVRP 413
           + +M ++GV P
Sbjct: 417 VDMMIKRGVEP 427



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 160/347 (46%), Gaps = 45/347 (12%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA ++F+ +I+EG +P ++TY TL+  L +     + + L+  +E+   +PD
Sbjct: 125 LCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPD 184

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++ ++I++  +   V EA  +F +M   G  P   TY +L+    N+ + +    LL 
Sbjct: 185 VVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLN 244

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K + P+   ++ +V A C +  + EA  +V  M+  G++PD VTY TL       
Sbjct: 245 QMVNSK-ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTL------- 296

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                                       + G+C +  M++A++    M      P+++ +
Sbjct: 297 ----------------------------MDGHCLQSEMDEAVKVFDMMVRKGFAPDVISY 328

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGV---KPDVVTFSTI-MDAWSSAGLMGKCQEIFD 299
            +LI      KD  G+   ++L E  G+    PD V    + +       L  K + + +
Sbjct: 329 TTLINA--GKKDGGGL---VSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLLN 383

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
           +MV + I P++ +FS +     + G+  +A  ++  M K GV PN V
Sbjct: 384 EMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNAV 430



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 121/241 (50%), Gaps = 13/241 (5%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  +F+ ++ +G  P + TYT+LV AL     +K + +L++++    + PD ++F+ ++
Sbjct: 203 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 262

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +A  + G V EA +I   M   G +P   TY TL+ G+    + +E++K+  +M + K  
Sbjct: 263 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR-KGF 321

Query: 132 KPNDRTYNILVRAWCSKN----SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            P+  +Y  L+ A         S++E   +V +       PDAV    +        + +
Sbjct: 322 APDVISYTTLINAGKKDGGGLVSLQEVIGLVKE------TPDAVKGGAVEVIRKDKMKLF 375

Query: 188 -RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV-VFNS 245
            +   +L EM N+++ PN      +V   CKEG + +A   +  M +  V PN V VF++
Sbjct: 376 EKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNAVKVFDT 435

Query: 246 L 246
           +
Sbjct: 436 M 436



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 22/181 (12%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +GK  EAH I + +I+ G  P ++TYTTL+     Q      + +   + + G 
Sbjct: 262 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 321

Query: 61  KPDSILFNAMINACSESG----NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
            PD I +  +INA  + G    ++ E + + ++  D+            +KG       +
Sbjct: 322 APDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDA------------VKGGAVEVIRK 369

Query: 117 ESLKLLQ----LMSQDKNVK--PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
           + +KL +    L+++  N K  PN   ++ +V A C +  + EA +VV  M+  G++P+A
Sbjct: 370 DKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNA 429

Query: 171 V 171
           V
Sbjct: 430 V 430



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 10/166 (6%)

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           F+T+ DA SS          F+ ++     P I  F+ L     +        S+ T M 
Sbjct: 23  FNTLDDALSS----------FNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMD 72

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
            +GV PNV     +I+ +C+  ++  A S+  K+ ++G  P+  T+ TL+ G     +  
Sbjct: 73  SFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIG 132

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            A  L   M ++G +P   T   + +    +G    A R+L+S E+
Sbjct: 133 EALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ 178


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 194/395 (49%), Gaps = 9/395 (2%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G+ P  IT+TTL+  L  +   K +L    KV     + + + +  ++N   ++G 
Sbjct: 71  ILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGE 130

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
              A+K+ + ++D   +P    Y+ +I G        E+  L   M   + + PN  TYN
Sbjct: 131 TRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDA-REIFPNVITYN 189

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+ A+C    +  A++++++M+   I PD  T++ L  A  + G+   A+Q+   M   
Sbjct: 190 TLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQM 247

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            V PN  +  I+++G CK   +++AM  L  M    + P+ V +NSLI G      S  +
Sbjct: 248 GVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCK---SGRI 304

Query: 260 DKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
             AL LM E    G   DVVT+++++DA      + K   +F  M + GI+P ++ ++ L
Sbjct: 305 TSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTAL 364

Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
             G  + G  + A+ +   +   G   +V  +T +ISG C       A++I  KM + G 
Sbjct: 365 IDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGC 424

Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
            PN  T+E ++    E  +  +AE+LL  M  KG+
Sbjct: 425 IPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 112/480 (23%), Positives = 214/480 (44%), Gaps = 52/480 (10%)

Query: 25  HRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAM 84
           H   +I +  ++ +L + K + +++SL  +++  G++ + +  + +IN     G +  + 
Sbjct: 6   HTSPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSF 65

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
            +  K+   G  P T T+ T                                    L++ 
Sbjct: 66  SLLGKILKLGYXPNTITWTT------------------------------------LMKG 89

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
            C K  +++  +   K+VA   Q + V+Y TL     + GET  A ++L  +++   RPN
Sbjct: 90  LCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPN 149

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
                 I+ G CK+  + +A      M   E+ PN++ +N+LI  F       G   A +
Sbjct: 150 VVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMG---AFS 206

Query: 265 LMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
           L+ E  +K   PDV TFS ++DA    G   K  +IF  MV+ G+ P+++ ++I+  G  
Sbjct: 207 LLHEMILKNINPDVYTFSILIDALCKEGKNAK--QIFHAMVQMGVNPNVYSYNIMINGLC 264

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           +     +A ++L  M    + P+ V + ++I G C + ++  A+++  +M   G   ++ 
Sbjct: 265 KCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVV 324

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           TY +LL    + +   +A  L   M+E+G++P   T   + D     GL +  +  LK+A
Sbjct: 325 TYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALID-----GLCKGGR--LKNA 377

Query: 442 EEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVSS-EHNGSSAAKIRSQIVLRS 500
           +E  Q +  K   I V +     +       F +   + S  E NG     +  +I++RS
Sbjct: 378 QELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRS 437



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 165/352 (46%), Gaps = 3/352 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L  KG+  +  +  + ++ +  +   ++Y TL+  L +    +  + L+  +E    
Sbjct: 87  MKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRST 146

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P+ ++++A+I+   +   V+EA  ++ +M      P   TYNTLI  +   G+   +  
Sbjct: 147 RPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFS 206

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M   KN+ P+  T++IL+ A C +   + A  + + MV  G+ P+  +YN +    
Sbjct: 207 LLHEMIL-KNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGL 263

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +      A  +L EM +  + P+  T   ++ G CK G +  A+  +  M       ++
Sbjct: 264 CKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADV 323

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V + SL+      ++ D        M+E G++P + T++ ++D     G +   QE+F  
Sbjct: 324 VTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQH 383

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           ++  G   D+  ++++  G  + G   +A +I + M   G  PN V F  +I
Sbjct: 384 LLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIII 435



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 83/163 (50%), Gaps = 1/163 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+   A  + N +   G    ++TYT+L+ AL + +      +L  K+++ G++P 
Sbjct: 298 LCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPT 357

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              + A+I+   + G +  A ++FQ +   GC     TY  +I G    G  +E+L +  
Sbjct: 358 MYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKS 417

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGI 166
            M +D    PN  T+ I++R+   K+  ++A  ++++M+A G+
Sbjct: 418 KM-EDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459


>gi|302809819|ref|XP_002986602.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
 gi|300145785|gb|EFJ12459.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
          Length = 445

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 195/421 (46%), Gaps = 8/421 (1%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS--ILFNAMINACSESGNVDEAMKIF 87
            TY TLV        F     L+ + +  GM P S  +L N M+   SE+G VDEA    
Sbjct: 15  FTYGTLVHGHCLAGEFDEAKRLVEEFKDTGMSPGSLVVLHNLMLKGFSEAGFVDEAKSHL 74

Query: 88  QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
            +M    CKP + +YNTLI    + G+ +E+ + LQ M++ + V PN  TYN +      
Sbjct: 75  HRMD---CKPNSVSYNTLIDALCSSGRIQEAREELQAMAK-RGVAPNRVTYNAMATGLGK 130

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
              ++EA+ ++  M ++G    AVT+N +     + G    A +++  M    + PN  T
Sbjct: 131 AGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGRPDEACKVMETMLLRNIEPNILT 190

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
             +I+  +CK    E+A+     M E+   P +V FN+L++ F +    D   K L  M 
Sbjct: 191 LNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAKLLETMA 250

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
               KP+ VT+S ++  ++  G M + +   + +V  G  P++ V +    G  + GE  
Sbjct: 251 HSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMD 310

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            A   LT M + G   N   + +++ G+C   +M  A  + E+M   G  P+  TY  L+
Sbjct: 311 LASRFLTVMAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTTYSVLI 370

Query: 388 WGYGEAKQPWRA-EELLQVMEE-KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
            G   A Q   A   +LQV    +  RP  +T   + +    +G    A  VL+   ++ 
Sbjct: 371 QGLCSAGQIEHAFMVMLQVTRAVESARPDPATFVKLIEKLCELGEMDRAALVLERMGDEH 430

Query: 446 Q 446
           +
Sbjct: 431 E 431



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 178/348 (51%), Gaps = 3/348 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P  ++Y TL+ AL    R +     +  + K G+ P+ + +NAM     ++G +DEA +
Sbjct: 80  KPNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGKAGLLDEAFE 139

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +   M+ +G   T  T+N +++     G+P+E+ K+++ M   +N++PN  T N+++ A+
Sbjct: 140 LMGVMESAGFALTAVTFNPVVEFLCKSGRPDEACKVMETMLL-RNIEPNILTLNLILHAF 198

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C     EEA  +   MV  G  P  VT+N L   +    +   A ++L  M +++ +PN 
Sbjct: 199 CKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAKLLETMAHSKCKPNF 258

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T  I+V  + + G M +A  FL ++      PNL+V N+ + G     + D   + LT+
Sbjct: 259 VTYSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTV 318

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M E G + +  T++++++ +   G M + + + ++M+  G  PD   +S+L +G   AG+
Sbjct: 319 MAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTTYSVLIQGLCSAGQ 378

Query: 326 PQKAESILTSMRKY--GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            + A  ++  + +      P+   F  +I   C   +M RA  + E+M
Sbjct: 379 IEHAFMVMLQVTRAVESARPDPATFVKLIEKLCELGEMDRAALVLERM 426



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 149/338 (44%), Gaps = 3/338 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  EA      + + G  P  +TY  +   L +         L+  +E  G 
Sbjct: 90  IDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGKAGLLDEAFELMGVMESAGF 149

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
              ++ FN ++    +SG  DEA K+ + M     +P   T N ++  +    +PEE+L 
Sbjct: 150 ALTAVTFNPVVEFLCKSGRPDEACKVMETMLLRNIEPNILTLNLILHAFCKAARPEEALG 209

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +  +M +     P   T+N L+  +C+ + ++ A  ++  M  S  +P+ VTY+ + + +
Sbjct: 210 MTDIMVE-MGFCPTIVTFNALLELFCNTDQMDSAAKLLETMAHSKCKPNFVTYSIMVQKF 268

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           A+ G    A   L ++      PN   C   V+G CK G M+ A RFL  M E     N 
Sbjct: 269 AEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTVMAEEGCRANT 328

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +NSL++GF  +   D  ++ L  M   G  PD  T+S ++    SAG +     +   
Sbjct: 329 ATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTTYSVLIQGLCSAGQIEHAFMVMLQ 388

Query: 301 MVKA--GIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           + +A     PD   F  L +     GE  +A  +L  M
Sbjct: 389 VTRAVESARPDPATFVKLIEKLCELGEMDRAALVLERM 426



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 120/270 (44%), Gaps = 6/270 (2%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
            L   G+P EA  +   ++     P ++T   ++ A  +  R +  L +   + + G  P
Sbjct: 162 FLCKSGRPDEACKVMETMLLRNIEPNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCP 221

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
             + FNA++     +  +D A K+ + M  S CKP   TY+ +++ +  +G+  E+   L
Sbjct: 222 TIVTFNALLELFCNTDQMDSAAKLLETMAHSKCKPNFVTYSIMVQKFAEMGRMVEARAFL 281

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           + +       PN    N  V   C    ++ A   +  M   G + +  TYN+L   + +
Sbjct: 282 EQLVV-CGYAPNLLVCNAYVAGLCKTGEMDLASRFLTVMAEEGCRANTATYNSLVEGFCK 340

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA-MRFLYRMKELE-VHPNL 240
            G    AE++L EM      P+  T  +++ G C  G +E A M  L   + +E   P+ 
Sbjct: 341 LGRMDEAERVLEEMIAEGSLPDSTTYSVLIQGLCSAGQIEHAFMVMLQVTRAVESARPDP 400

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
             F  LI+   ++ +   +D+A  ++E  G
Sbjct: 401 ATFVKLIEKLCELGE---MDRAALVLERMG 427


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 207/399 (51%), Gaps = 19/399 (4%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESL 119
           +SI+ + ++ A  ++G +D A++ F +  D G + +  + N ++      G +G  E   
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           K +      + +  N  T+++++   C     ++A +VV  M A G  P  +TYNT+   
Sbjct: 218 KEMI----RRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDG 273

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           Y + G+ ++A+ +L EM   ++ PNE T  I++ G+C++ N+  A +    M+   + PN
Sbjct: 274 YCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPN 333

Query: 240 LVVFNSLIKGFLDIKDSDG-VDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           +V +NSLI G      S+G +D+AL L   M   G+KP+VVT++ +++ +    ++ + +
Sbjct: 334 VVTYNSLINGLC----SNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAR 389

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           E+ DD+ K G+ P++  F+ L   Y +AG    A  + + M   GV PNV  +  +I G+
Sbjct: 390 EMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGF 449

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETL---LWGYGEAKQPWRAEELLQVMEEKGVR 412
           C    ++ A  + ++M   G+  +L TY  L   L   GE ++  R  + + +ME+KG R
Sbjct: 450 CREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRR 509

Query: 413 PKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
               T  ++   +   G   EA R+L    E +  +PN+
Sbjct: 510 ANIVTYNVLIKGFCNKGKLEEANRLLNEMLE-KGLIPNR 547



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 191/366 (52%), Gaps = 4/366 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G R + ++   ++ +L ++ R   + S+  ++ +  +  + + F+ +IN   + G   +A
Sbjct: 189 GFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKA 248

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
             + + MK  G  P+  TYNT+I GY   GK  ++  LL+ M   K + PN+ T+NIL+ 
Sbjct: 249 GDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVA-KRIHPNEITFNILID 307

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +C   ++  A  V  +M   G+QP+ VTYN+L       G+   A  +  +M    ++P
Sbjct: 308 GFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKP 367

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  T   +++G+CK+  +++A   L  + +  + PN++ FN+LI  +      D      
Sbjct: 368 NVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLR 427

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           ++M + GV P+V T++ ++  +   G + + +++  +M   G++ D+  ++IL     + 
Sbjct: 428 SMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKK 487

Query: 324 GEPQKAESIL---TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
           GE +KA  +L   T M K G   N+V +  +I G+CN  K++ A  +  +M E G+ PN 
Sbjct: 488 GETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNR 547

Query: 381 KTYETL 386
            TY+ L
Sbjct: 548 TTYDIL 553



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 171/329 (51%), Gaps = 9/329 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  +A  +   +   G  P++ITY T++    +  +     +L+ ++    +
Sbjct: 236 INGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRI 295

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I FN +I+      NV  A K+F++M+  G +P   TYN+LI G  + GK +E+L 
Sbjct: 296 HPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALG 355

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   MS    +KPN  TYN L+  +C K  ++EA  ++  +   G+ P+ +T+NTL  AY
Sbjct: 356 LQDKMS-GMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAY 414

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A  +   M +  V PN  T   ++ G+C+EGN+++A +    M+   +  +L
Sbjct: 415 GKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADL 474

Query: 241 VVFNSLIKGFLDIKDSDGVDKAL---TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +N L+       ++    + L   TLME+ G + ++VT++ ++  + + G + +   +
Sbjct: 475 VTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRL 534

Query: 298 FDDMVKAGIEPDIHVFSIL-----AKGYV 321
            ++M++ G+ P+   + IL      KG++
Sbjct: 535 LNEMLEKGLIPNRTTYDILRDEMMEKGFI 563



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 134/254 (52%), Gaps = 11/254 (4%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F  +  +G +P ++TY +L+  L    +    L L  K+   G+KP+ + +NA+IN
Sbjct: 318 AKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALIN 377

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              +   + EA ++   +   G  P   T+NTLI  YG  G+ +++  LL+ M  D  V 
Sbjct: 378 GFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF-LLRSMMLDTGVC 436

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           PN  TYN L+  +C + +++EA  +  +M  +G++ D VTYN L  A  + GET +A ++
Sbjct: 437 PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRL 496

Query: 193 LFE---MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI-- 247
           L E   M+    R N  T  +++ G+C +G +E+A R L  M E  + PN   ++ L   
Sbjct: 497 LDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDE 556

Query: 248 ---KGFLDIKDSDG 258
              KGF  I D DG
Sbjct: 557 MMEKGF--IPDIDG 568



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 156/313 (49%), Gaps = 22/313 (7%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  +A  +   ++ +   P  IT+  L+    R +   +   +  ++++ G++P+ + +
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N++IN    +G +DEA+ +  KM   G KP   TYN LI G+      +E+ ++L  + +
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK 397

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + + PN  T+N L+ A+     +++A+ +   M+ +G+ P+  TYN L   + + G   
Sbjct: 398 -RGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVK 456

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV---HPNLVVFN 244
            A ++  EM+ N ++ +  T  I+V   CK+G    A+R L  M  +E      N+V +N
Sbjct: 457 EARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYN 516

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            LIKGF +    +  ++ L  M E G+ P+  T+  +                 D+M++ 
Sbjct: 517 VLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILR----------------DEMMEK 560

Query: 305 GIEPDI--HVFSI 315
           G  PDI  H++++
Sbjct: 561 GFIPDIDGHLYNV 573



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 161/345 (46%), Gaps = 6/345 (1%)

Query: 107 KGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR-AWCSKNSIEEAWNVVYKMVASG 165
           K +G +   E+  +LL L++  KN        +   + A  S ++I  + +V+     S 
Sbjct: 99  KEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVL----GSW 154

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
              +++  + L  AY + GE   A +      +   R +  +C  ++    KEG +    
Sbjct: 155 GCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVE 214

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
                M    +  N+V F+ +I G   +         +  M+ +G  P V+T++TI+D +
Sbjct: 215 SVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGY 274

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
             AG M K   +  +MV   I P+   F+IL  G+ R      A+ +   M++ G+ PNV
Sbjct: 275 CKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNV 334

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
           V + ++I+G C+  K+  A+ + +KM  +G+ PN+ TY  L+ G+ + K    A E+L  
Sbjct: 335 VTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDD 394

Query: 406 MEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           + ++G+ P   T   + D++   G   +A  +L+S   D    PN
Sbjct: 395 IGKRGLAPNVITFNTLIDAYGKAGRMDDA-FLLRSMMLDTGVCPN 438



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 117/232 (50%), Gaps = 4/232 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  EA  + + +   G +P ++TY  L+    ++K  K    ++  + K G+
Sbjct: 341 INGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGL 400

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I FN +I+A  ++G +D+A  +   M D+G  P  STYN LI G+   G  +E+ K
Sbjct: 401 APNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARK 460

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV---ASGIQPDAVTYNTLA 177
           L + M +   +K +  TYNILV A C K    +A  ++ +M      G + + VTYN L 
Sbjct: 461 LAKEM-EGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLI 519

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
           + +   G+   A ++L EM    + PN  T  I+     ++G + D    LY
Sbjct: 520 KGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHLY 571


>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Brachypodium distachyon]
          Length = 597

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 198/421 (47%), Gaps = 9/421 (2%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLI---SKVEKDGMKPDSILFNAMIN 72
           +F  + +   RP ++TY  LV  L +  R    LS++   S  E D + PD ++ N +++
Sbjct: 159 LFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSVLDGMSGPESD-VCPDVVMLNNIVD 217

Query: 73  ACSESGNVDEAMKIFQKMKDS--GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
              ++G + +A+K  ++   S  GC P T TYN L   +   G    + +L+  M +++ 
Sbjct: 218 GLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKER- 276

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVY--KMVASGIQPDAVTYNTLARAYAQYGETYR 188
           V PN  T N +V   C    +  A       + V    + +AVTY+TL  A+        
Sbjct: 277 VTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGV 336

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A ++  EM +    P+      ++SG  + G ++DA      MK+     +   +N LI 
Sbjct: 337 AMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIG 396

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           GF   K  +   + L  M+E G++PDV T++T++     AG      E+   M+  G  P
Sbjct: 397 GFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRP 456

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
            +  F  L  GY + G+  +A  I  SM + G+ PN V++ T+I   C +     A+ ++
Sbjct: 457 SVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELF 516

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           ++M E  +  N+ T+  LL G  +   P +A EL+ +M E    P   TI ++ +    I
Sbjct: 517 DEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVI 576

Query: 429 G 429
           G
Sbjct: 577 G 577



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 200/427 (46%), Gaps = 46/427 (10%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           PD+  FN +++A +++G++    ++F  M+D+  +P   TY  L+KG    G+  ++L +
Sbjct: 135 PDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSV 194

Query: 122 LQLMS-QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS--GIQPDAVTYNTLAR 178
           L  MS  + +V P+    N +V   C    +++A   V + + S  G  P+ VTYN LA 
Sbjct: 195 LDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAH 254

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL--EV 236
           A+ + G    A +++ +M+  +V PN  T   IV G C  G +  A+ F    + +  E 
Sbjct: 255 AFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEA 314

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIM----------D 283
             N V +++L+  FL    ++ V  A+ L  E    G  PD + + T++          D
Sbjct: 315 RGNAVTYSTLVGAFLH---TNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDD 371

Query: 284 AWSSAGLM-----------------GKCQ--------EIFDDMVKAGIEPDIHVFSILAK 318
           AWS A  M                 G C+        E+  +M +AG++PD++ ++ L  
Sbjct: 372 AWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLS 431

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           G  +AG+    + +L  M   G  P+VV F T+I G+C   ++  A+ I+  M E GI P
Sbjct: 432 GLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQP 491

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           N   Y TL+    +++    A EL   M EK V    +T   +    R   +  +A  ++
Sbjct: 492 NTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELM 551

Query: 439 KSAEEDR 445
               E R
Sbjct: 552 DLMREGR 558



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 172/378 (45%), Gaps = 13/378 (3%)

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
           S S + D A  +   +      P TS +NTL+      G      +L   M +D +V+PN
Sbjct: 113 SPSSSADAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASM-RDASVRPN 171

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVA--SGIQPDAVTYNTLARAYAQYGETYRAEQM 192
             TY ILV+  C    + +A +V+  M    S + PD V  N +     + G   +A + 
Sbjct: 172 VVTYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKF 231

Query: 193 LFEMQN--NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           + E     +   PN  T   +   +C+ GN+  A   + +M++  V PN V  N+++ G 
Sbjct: 232 VEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGL 291

Query: 251 LDIKDSDGVDKALTLMEE-----FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
             +     V  AL    E        + + VT+ST++ A+     +G   E+F +MV  G
Sbjct: 292 CWVGR---VGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEG 348

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
             PD  ++  +  G  +AG    A S+ TSM+K G   +   +  +I G+C   ++  A 
Sbjct: 349 NSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAY 408

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            +  +M E G+ P++ TY TLL G  +A      +ELL  M + G RP   T   +   +
Sbjct: 409 ELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGY 468

Query: 426 RAIGLAREAKRVLKSAEE 443
             +G   EA R+ +S +E
Sbjct: 469 CKVGQIDEALRIFRSMDE 486



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 102/196 (52%), Gaps = 5/196 (2%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NIL+G    + + +EA+ +   + E G +P + TY TL++ L +   F ++  L+ K+  
Sbjct: 392 NILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMID 451

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G +P  + F  +I+   + G +DEA++IF+ M +SG +P T  YNTLI           
Sbjct: 452 GGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSL 511

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +++L   M ++K+V  N  T+N L++    KN  E+A+ ++  M      PD VT + L 
Sbjct: 512 AIELFDEM-REKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILM 570

Query: 178 RAYAQYGETYRAEQML 193
                 GET R +  +
Sbjct: 571 EWLPVIGETDRLKHFM 586



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 3/125 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  IF  + E G +P  + Y TL+  L + +     + L  ++ +  +  +   F
Sbjct: 472 GQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTF 531

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           NA++    +    ++A ++   M++  C P   T + L++    +G   E+ +L   M  
Sbjct: 532 NALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIG---ETDRLKHFMQH 588

Query: 128 DKNVK 132
           D   K
Sbjct: 589 DTTPK 593


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 194/415 (46%), Gaps = 16/415 (3%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +I EGH P   T+  L+  L R   F     + +++ K  +  D+  F  MI  C E+G 
Sbjct: 115 MIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNEL-KSKVVLDAYSFGIMIKGCCEAGY 173

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKG---YGNVGKPEESLKLLQLMSQDK-NVKPND 135
             +  ++   +++ G  P    Y TLI G   YGNV   +           D+  + PN 
Sbjct: 174 FVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKN-----LFCKMDRLGLVPNP 228

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY++L+  +  +    E + +   M  SGI P+A  YN L   Y   G   +A ++  E
Sbjct: 229 HTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAE 288

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M+   +     T  I++ G C+     +A++ ++++ ++ + PN+V +N LI GF D+  
Sbjct: 289 MREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGK 348

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            D   +    ++  G+ P +VT++T++  +S    +    ++  +M +  I P    ++I
Sbjct: 349 MDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTI 408

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L   + R    +KA  + + M K G+ P+V  ++ +I G C    M+ A  +++ + E+ 
Sbjct: 409 LIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMH 468

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           + PN   Y T++ GY +    +RA  LL  M   G+ P       VA     IGL
Sbjct: 469 LQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPN------VASFCSTIGL 517



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/529 (21%), Positives = 225/529 (42%), Gaps = 11/529 (2%)

Query: 7   KGKPHEAH---YIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           +G  H +H   +I N L+  G  P      +L+  L   +   S++  +++         
Sbjct: 32  QGLQHTSHSISFILNHLLSSGMLPQA---QSLILRLISGRIPSSLMLQLTQAHFTPCLTY 88

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           + L++ ++NA   S + D+A+     M   G  P ++T+N L+         +++  +  
Sbjct: 89  TPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFN 148

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            +     V  +  ++ I+++  C      + + ++  +   G+ P+ V Y TL     +Y
Sbjct: 149 ELKSK--VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKY 206

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G    A+ +  +M    + PN  T  ++++G+ K+G   +  +    MK   + PN   +
Sbjct: 207 GNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAY 266

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N LI  + +    D   K    M E G+   V+T++ ++         G+  ++   + K
Sbjct: 267 NCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNK 326

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ P+I  ++IL  G+   G+   A  +   ++  G+ P +V + T+I+G+     +  
Sbjct: 327 VGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAG 386

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           A+ + ++M E  I P+  TY  L+  +       +A E+  +ME+ G+ P   T  ++  
Sbjct: 387 ALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIH 446

Query: 424 SWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSE 483
                G  +EA ++ KS  E     PN    I    IH      +S      +  +V S 
Sbjct: 447 GLCVHGNMKEASKLFKSLGE-MHLQPN--SVIYNTMIHGYCKEGSSYRALRLLNEMVHSG 503

Query: 484 HNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQPMVVCRKQCSQV 532
              + A+   +  +L  D  W   + L      SG++P V   K   +V
Sbjct: 504 MVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKV 552



 Score = 40.8 bits (94), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 48/109 (44%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA  +F  L E   +P  + Y T++    ++      L L++++   GM P+
Sbjct: 448 LCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPN 507

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNV 112
              F + I          EA  +  +M +SG KP+ S Y  + K  G+V
Sbjct: 508 VASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKVKGDV 556


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 202/418 (48%), Gaps = 8/418 (1%)

Query: 23  EGHRPTLIT--YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
           EGHR  L    Y +L+ A  +    +  L++   + + G++PD+  FN ++NA  ++  V
Sbjct: 81  EGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRV 140

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           D   K+F++M++  C P   TY+ LI      G  E++LK+   M + +  +PN  TY  
Sbjct: 141 DSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDM-KSRGCRPNIFTYTS 199

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           ++        +++A+ +  +M + G+    V YN+L     + G    A ++  EM +  
Sbjct: 200 MIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKG 259

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           ++P+  T   +V G    G   +A R     +++    ++ ++N LI      K  D   
Sbjct: 260 LQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAW 319

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           +    +EE G+ PDV TF+ +MD    +G +     +  DM +AG  PD+ V++ L  G 
Sbjct: 320 EIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGL 379

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            ++G  ++A  +L  M+  G  P+VV + T+I   C   +++ A+ ++E++   G   N 
Sbjct: 380 RKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF-ANT 438

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGV----RPKKSTIQLVADSWRAIGLAREA 434
            TY T+L G   A +   A +L   M+++ V     P   T   + +  R  GL+  A
Sbjct: 439 VTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSELA 496



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 97/400 (24%), Positives = 188/400 (47%), Gaps = 12/400 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++  V  G   +A  ++  + + G RP   T+  L+ A  + KR  S+  L  +++    
Sbjct: 96  IDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNC 155

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ I ++ +I+A  + G V++A+K+F  MK  GC+P   TY ++I G G  G  +++  
Sbjct: 156 SPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFF 215

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M+ +  V      YN L+         + A  +  +M++ G+QPD VT+ +L    
Sbjct: 216 LFEEMTSEGLVATR-VVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGL 274

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A ++  E ++     +     +++   CK   +++A      ++E  + P++
Sbjct: 275 GVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDV 334

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             FN+L+ G      S  +  A  L   M+  G  PDV  ++T++D    +G + +  ++
Sbjct: 335 YTFNALMDGLC---KSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQL 391

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
             +M   G EPD+  ++ L     + G  + A  +   +   G   N V + T+++G C 
Sbjct: 392 LLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKG-FANTVTYNTILNGLCM 450

Query: 358 AVKMQRAMSIYEKM----CEIGINPNLKTYETLLWGYGEA 393
           A ++  A  ++  M     +  I+P+  TY TLL G  +A
Sbjct: 451 AGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQA 490



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/418 (23%), Positives = 198/418 (47%), Gaps = 1/418 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           + G  P++   TTLV  L   +RF     ++++VEK        +F  +    + +G ++
Sbjct: 12  QRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGYASAGLLE 71

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           ++++  ++M+   C  T S YN+LI  +   G  +++L + ++M Q   ++P+  T+N+L
Sbjct: 72  KSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQ-SGLRPDTYTFNVL 130

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           + A+     ++  W +  +M      P+ +TY+ L  A  + G   +A ++  +M++   
Sbjct: 131 MNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGC 190

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
           RPN  T   ++ G  K G+++ A      M    +    VV+NSLI G      +D   K
Sbjct: 191 RPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAK 250

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
               M   G++PD VTF++++     AG   + + IF +    G   D++++++L     
Sbjct: 251 LFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLC 310

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           ++    +A  I   + + G+ P+V  F  ++ G C + ++  A  +   M   G  P++ 
Sbjct: 311 KSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVT 370

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            Y TL+ G  ++ +   A +LL  M+  G  P   T   + D     G   +A R+ +
Sbjct: 371 VYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFE 428



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 163/332 (49%), Gaps = 12/332 (3%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  +F  +   G RP + TYT+++  L +         L  ++  +G+    +++
Sbjct: 173 GGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVY 232

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N++I+    SG  D A K+F++M   G +P   T+ +L+ G G  G+  E+ ++ Q  ++
Sbjct: 233 NSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQ-EAR 291

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D     +   YN+L+   C    ++EAW +  ++   G+ PD  T+N L     + G  +
Sbjct: 292 DVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIH 351

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +L +M+     P+      ++ G  K G +E+A + L  M+ L   P++V +N+LI
Sbjct: 352 DAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLI 411

Query: 248 KGFLDIKDSDG-VDKALTLMEEFGVK--PDVVTFSTIMDAWSSAGLMGKCQEIFDDM--- 301
               D     G ++ AL L EE   K   + VT++TI++    AG + +  ++F+ M   
Sbjct: 412 ----DESCKGGRIEDALRLFEEISAKGFANTVTYNTILNGLCMAGRVDEAYKLFNGMKQE 467

Query: 302 -VKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            V   I+PD   ++ L  G  +AG  + A S+
Sbjct: 468 TVDGVIDPDFVTYTTLLNGARQAGLSELANSL 499



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 110/233 (47%)

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           +  GY   G +E ++  L RM+          +NSLI  F+    +        +M + G
Sbjct: 60  LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           ++PD  TF+ +M+A+  A  +    ++F++M      P++  +SIL     + G  +KA 
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +   M+  G  PN+  +T++I G   +  + +A  ++E+M   G+      Y +L+ G 
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           G + +   A +L + M  KG++P   T   +       G A EA+R+ + A +
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARD 292


>gi|224102411|ref|XP_002312667.1| predicted protein [Populus trichocarpa]
 gi|222852487|gb|EEE90034.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 111/465 (23%), Positives = 227/465 (48%), Gaps = 8/465 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L+   +   AH+ ++ +   G   +  TY+  ++ L + K F  I +L+  +EK   
Sbjct: 51  IGVLIRHSRFDLAHHYYSKMAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHC 110

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   FN  +N        + A+++F +M + G +P   T+  +I G   + K + +++
Sbjct: 111 VPDIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQ 170

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGI-QPDAVTYNTLARA 179
              L   DK ++P+++    L    C    ++ A+ ++  +++ G+ +   + YN L   
Sbjct: 171 F-WLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISG 229

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + + G   +A  M+  M     +P+  T  ++++  C E   E+A++ L +M+   + P+
Sbjct: 230 FCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPD 289

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP---DVVTFSTIMDAWSSAGLMGKCQE 296
           +  +N L+K       ++  DKA   M    V     DVV+++TI+ A+ S     +  +
Sbjct: 290 VYSYNQLLKAHCK---ANHPDKAYLFMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYK 346

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F++M + GI PD+  F+IL K ++R G    A+ +L  M   G+ P+ + +TT+I   C
Sbjct: 347 LFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHC 406

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
            + K++ A SI+  M E GI P++ +Y  L+ G+ ++ +      L + M ++G  P + 
Sbjct: 407 KSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEV 466

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIH 461
           T +L+  +        +A RV     E   ++     E+ + +I 
Sbjct: 467 TYKLIIGALVRENKLSDACRVWDQMMERGLTLDRGISEMLINAIQ 511



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 106/504 (21%), Positives = 205/504 (40%), Gaps = 52/504 (10%)

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLI-------------KGYGN 111
           +++   I +  ++G +D A+K+F +M  S C+     YN  I               Y  
Sbjct: 10  LIYRTRIASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSK 69

Query: 112 VGKPEESL------KLLQLMSQDK---------------NVKPNDRTYNILVRAWCSKNS 150
           +     SL      + +  + Q K               +  P+   +NI +     +N 
Sbjct: 70  MAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENR 129

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
            E A  V  +MV  G +PD VT+  +     +  +   A Q    M +  +RP+ + C  
Sbjct: 130 EESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVA 189

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHP-NLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
           +  G C  G ++ A   +  +    +   + +V+N+LI GF      D     ++ M   
Sbjct: 190 LAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRT 249

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
           G KPD+VT++ +++   +  +  +  ++   M  + IEPD++ ++ L K + +A  P KA
Sbjct: 250 GCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKA 309

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
              + +        +VV + T+I  +C+    +RA  ++E+M   GI P++ T+  L+  
Sbjct: 310 YLFMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKA 369

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMP 449
           +        A++LL +M   G+ P +     + D     G    A  +     E +   P
Sbjct: 370 FLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVE-KGITP 428

Query: 450 NKKDEIAV-----------ESIHRKQNLSASNS-----TFLQIPGVVSSEHNGSSAAKIR 493
           +     A+           E +H  + +    S     T+  I G +  E+  S A ++ 
Sbjct: 429 DVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDACRVW 488

Query: 494 SQIVLRSDTVWTATKSLFVNTYGS 517
            Q++ R  T+      + +N   S
Sbjct: 489 DQMMERGLTLDRGISEMLINAIQS 512


>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
 gi|223945505|gb|ACN26836.1| unknown [Zea mays]
          Length = 462

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 184/387 (47%), Gaps = 10/387 (2%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +I     P  +T+ T + A  +       + L+ ++ K G  PD I+++ ++N  SE G 
Sbjct: 33  MIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGR 92

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           VDEA+K+   M    C+P T  YN  +KG    G+ EE  +L+  M + K+  PND T++
Sbjct: 93  VDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVR-KDCPPNDATFS 148

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+ + C    +E A  V+ +M   G  PD V+YNT+   ++      RA+  L  +++ 
Sbjct: 149 TLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQA---RADDALKLLKSM 205

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
             +P+  +   ++   CK     DA+  + +M + +   N + FN LI            
Sbjct: 206 LCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDA 265

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            +   LM ++   PD+VT+S++++ +S  GL     ++F  M       DI  ++   KG
Sbjct: 266 IEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM---PCRADIFSYNATLKG 322

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
              A     A  ++  M      PN V F  +IS  C    + RA+ +YE+M + GI P+
Sbjct: 323 LCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPD 382

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVM 406
           + TY  L+ GY E  +   A + L  M
Sbjct: 383 IFTYNALINGYSEQGRLDDALKFLSTM 409



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/378 (23%), Positives = 183/378 (48%), Gaps = 15/378 (3%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  + N ++    RP  + Y   +  L    R++ +  LI+++ +    P+   F
Sbjct: 91  GRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATF 147

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +IN+  ++  V+ A+++ ++M+  G  P   +YNT+I  + +  + +++LKLL+ M  
Sbjct: 148 STLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML- 206

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
               KP+  ++N +++  C      +A  +V KM+    + + +T+N L  +  Q G+  
Sbjct: 207 ---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVK 263

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF-LYRMKELEVHPNLVVFNSL 246
            A ++   M   +  P+  T   +++G+ ++G   D M F L+R   +    ++  +N+ 
Sbjct: 264 DAIEVFELMPKYRCMPDIVTYSSLINGFSEQG--LDEMAFDLFR--SMPCRADIFSYNAT 319

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +KG       D   + +  M      P+ VTF+ ++ +    GL+ +  ++++ M K GI
Sbjct: 320 LKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGI 379

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            PDI  ++ L  GY   G    A   L++M      P+ + + +++ G C A + + A  
Sbjct: 380 TPDIFTYNALINGYSEQGRLDDALKFLSTM---PCEPDTISYNSILKGLCRAERWKDAEK 436

Query: 367 IYEKMCEIGINPNLKTYE 384
           +  +M      PN  T++
Sbjct: 437 LVTEMLRKNCTPNEVTFK 454



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 140/285 (49%), Gaps = 7/285 (2%)

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           + PD  TYNT+ +      +  +AE+++ EM  N   PNE T    +  +C+ G ++ A+
Sbjct: 3   VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
             L +M +    P+++++++L+ GF    +   VD+AL L+     +P+ V ++  +   
Sbjct: 63  ELLEQMPKYGCTPDVIIYSTLVNGF---SEHGRVDEALKLLNTMLCRPNTVCYNAALKGL 119

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
             AG   +  E+  +MV+    P+   FS L     +    + A  +L  M+KYG  P+V
Sbjct: 120 CIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDV 179

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
           V + T+IS + +  +   A+ + + M      P+  ++  +L    +AK+ + A EL+  
Sbjct: 180 VSYNTIISCFSDQARADDALKLLKSM---LCKPDTISFNAVLKCLCKAKRWYDAVELVAK 236

Query: 406 MEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
           M +K  R  + T  ++ DS    G  ++A  V +   + R  MP+
Sbjct: 237 MLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYR-CMPD 280



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/323 (23%), Positives = 142/323 (43%), Gaps = 13/323 (4%)

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           V P+  TYN +++  C     E+A  ++ +M+ +   P+ VT+ T  RA+ Q G   RA 
Sbjct: 3   VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           ++L +M      P+      +V+G+ + G +++A++ L  M      PN V +N+ +KG 
Sbjct: 63  ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGL 119

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
                 + V + +  M      P+  TFST++++     L+    E+ + M K G  PD+
Sbjct: 120 CIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDV 179

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             ++ +   +        A  +L SM      P+ + F  V+   C A +   A+ +  K
Sbjct: 180 VSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAK 236

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
           M +     N  T+  L+    +  Q   A E+ ++M +    P   T   + + +   GL
Sbjct: 237 MLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGL 296

Query: 431 AREAKRVLKSAEEDRQSMPNKKD 453
              A  + +       SMP + D
Sbjct: 297 DEMAFDLFR-------SMPCRAD 312



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 3/207 (1%)

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
           + V P+   +N+++KG    K  +  ++ +  M      P+ VTF+T + A+   GL+ +
Sbjct: 1   MPVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDR 60

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
             E+ + M K G  PD+ ++S L  G+   G   +A  +L +M      PN V +   + 
Sbjct: 61  AVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALK 117

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G C A + +    +  +M      PN  T+ TL+    + +    A E+L+ M++ G  P
Sbjct: 118 GLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMP 177

Query: 414 KKSTIQLVADSWRAIGLAREAKRVLKS 440
              +   +   +     A +A ++LKS
Sbjct: 178 DVVSYNTIISCFSDQARADDALKLLKS 204



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 92/213 (43%), Gaps = 18/213 (8%)

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + PD + ++ + KG   A + ++AE ++  M +   HPN V F T I  +C    + RA+
Sbjct: 3   VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ------ 419
            + E+M + G  P++  Y TL+ G+ E     R +E L+++     RP            
Sbjct: 63  ELLEQMPKYGCTPDVIIYSTLVNGFSEHG---RVDEALKLLNTMLCRPNTVCYNAALKGL 119

Query: 420 LVADSWRAIG--LAREAKRVLKSAEEDRQSM-----PNKKDEIAVESIHRKQNLSASNS- 471
            +A  W  +G  +A   ++     +    ++      N+  E AVE + + Q        
Sbjct: 120 CIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDV 179

Query: 472 -TFLQIPGVVSSEHNGSSAAKIRSQIVLRSDTV 503
            ++  I    S +     A K+   ++ + DT+
Sbjct: 180 VSYNTIISCFSDQARADDALKLLKSMLCKPDTI 212


>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Cucumis sativus]
          Length = 481

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 194/404 (48%), Gaps = 10/404 (2%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A + F+ ++     P + ++  L+  L +   +  + SL +K+   G+ PD    N + 
Sbjct: 73  QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILA 132

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG-YG--NVGKPEESLKLLQLMSQD 128
           N       V E +     +   G  P   TYNTLIKG YG   VG  +E+ ++ + M + 
Sbjct: 133 NCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEM-KA 191

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY---AQYGE 185
           + + PN  +Y+ LV  +C    +EE+  +  +MV  G+QP+ V +N L        + G+
Sbjct: 192 QGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGD 251

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A ++   M +     NE +  I+++GYCK   +E+AM     M ++   PN+  +++
Sbjct: 252 LSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYST 311

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           L+ G L        +K   +M+  G+  D   +   +D     G++ +  E+F+++    
Sbjct: 312 LLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYN 371

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
            + D   +S L  G  +AG+ + A      + + G+ PNVV    +I G+C   ++ +A 
Sbjct: 372 FKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKAN 431

Query: 366 SIYEKMCEI---GINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            ++EKM ++   G  P++ TY TLL G+ E+ +      LL  M
Sbjct: 432 ILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 475



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 147/305 (48%), Gaps = 13/305 (4%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   EA  IF  +  +G  P +I+Y++LV       + +    L +++   G++P+ + F
Sbjct: 177 GHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQF 236

Query: 68  NAMIN-ACSES--GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           N +I+  C E   G++  A K+F  M   GC+    +Y  LI GY  + K EE++ L   
Sbjct: 237 NVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNE 296

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M Q    +PN +TY+ L+        + +A  +   M ASGI  D+  Y        + G
Sbjct: 297 MPQVGK-RPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNG 355

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
             + A ++  E+++   + +  +   ++ G CK G +E A  F  ++ +  + PN+V  N
Sbjct: 356 VLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCN 415

Query: 245 SLIKGFLDIKDSDGVDKALTL------MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
            +I GF  ++    VDKA  L      MEE G  PD++T++T++  +  +  + +   + 
Sbjct: 416 IMIHGFCRVEQ---VDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLL 472

Query: 299 DDMVK 303
             M K
Sbjct: 473 HKMFK 477



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 147/328 (44%), Gaps = 42/328 (12%)

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           ++     LM +   + P   ++N L+      N   + +++  KM  +G+ PD  T N L
Sbjct: 73  QAFHFFDLMMRSHPIPP-ISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNIL 131

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
           A          R  + L  M            GI+  GY                     
Sbjct: 132 ANCLCNLN---RVSEGLAAMT-----------GILRRGYI-------------------- 157

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGK 293
            P++V +N+LIKG   +      D+A  + EE    G+ P+V+++S+++  +  AG + +
Sbjct: 158 -PDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEE 216

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYV---RAGEPQKAESILTSMRKYGVHPNVVMFTT 350
            + +F++MV  G++P++  F++L        + G+   A  +  SM   G   N + +T 
Sbjct: 217 SKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTI 276

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I+G+C   K++ AM++Y +M ++G  PN+KTY TLL G  +  +   A +L  VM+  G
Sbjct: 277 LINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASG 336

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVL 438
           +        +  D     G+  EA  + 
Sbjct: 337 ISVDSCIYVIFLDGLCKNGVLFEAMELF 364



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/332 (23%), Positives = 155/332 (46%), Gaps = 10/332 (3%)

Query: 20  LIEEGHRPTLITYTTLVAAL---TRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           ++  G+ P ++TY TL+  L    +         +  +++  GM P+ I ++++++    
Sbjct: 151 ILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCC 210

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIK---GYGNVGKPEESLKLLQLMSQDKNVKP 133
           +G ++E+ ++F +M D G +P    +N LI      G +G    + KL   M   K  + 
Sbjct: 211 AGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMP-SKGCEH 269

Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
           N+ +Y IL+  +C    +EEA N+  +M   G +P+  TY+TL     Q G+   A ++ 
Sbjct: 270 NEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLF 329

Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
             M+ + +  +     I + G CK G + +AM     +K      +   ++ LI G    
Sbjct: 330 GVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKA 389

Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA---GIEPDI 310
              +   +    + + G++P+VVT + ++  +     + K   +F+ M K    G  PDI
Sbjct: 390 GKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDI 449

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
             ++ L +G+  + + ++  ++L  M K   H
Sbjct: 450 ITYNTLLRGFCESNKLEEVVNLLHKMFKRMRH 481



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 3/125 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA  +FN L     +    +Y+ L+  L +  + +       ++ ++G++P+
Sbjct: 351 LCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPN 410

Query: 64  SILFNAMINACSESGNVDEAMKIF---QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            +  N MI+       VD+A  +F   +KM+++GC P   TYNTL++G+    K EE + 
Sbjct: 411 VVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVN 470

Query: 121 LLQLM 125
           LL  M
Sbjct: 471 LLHKM 475



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 9/197 (4%)

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
             FD M+++   P I  F+ L  G  +     +  S+   MR  G+ P++     + +  
Sbjct: 76  HFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILANCL 135

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETL---LWGYGEAKQPWRAEELLQVMEEKGVR 412
           CN  ++   ++    +   G  P++ TY TL   L+G  +      A+E+ + M+ +G+ 
Sbjct: 136 CNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMI 195

Query: 413 PKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQ----NLSA 468
           P   +   +   +   G   E+KR+      D+   PN      +  I  K+    +LS+
Sbjct: 196 PNVISYSSLVHGFCCAGKLEESKRLFNEM-VDQGVQPNLVQFNVLIDILCKEGKIGDLSS 254

Query: 469 SNSTFLQIPGVVSSEHN 485
           +   FL +P     EHN
Sbjct: 255 ARKLFLSMPS-KGCEHN 270


>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
 gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 202/439 (46%), Gaps = 13/439 (2%)

Query: 3   ILVGKGKPHE---AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKV--EK 57
           +L G GK  E    + +   + +   +PT+IT+  L+  L + +R    L +  K+  EK
Sbjct: 158 LLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEK 217

Query: 58  DGMK----PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVG 113
           +  K    PD+I++N +I+   + G  +EA+ +  KM+   C PTT+T+N LI GY   G
Sbjct: 218 EETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSG 277

Query: 114 KPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY 173
           + E + KL   M ++  ++PN  T N LV   C  N I  A      M   G++ + VTY
Sbjct: 278 EIEVAHKLFNEM-ENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTY 336

Query: 174 NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
                A+       +A + L EM  +   P+      ++ G  + G ++DA   + ++KE
Sbjct: 337 TVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKE 396

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
                + V +N LI  F      D   + L  ME  GVKPD VT++T++  +S  G    
Sbjct: 397 AGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKL 456

Query: 294 CQEIFDDMVKA-GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG--VHPNVVMFTT 350
             +    M +  G+ P +  +  L   Y       +A  I   M      V PN V++  
Sbjct: 457 AHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNI 516

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I   C   ++  A+S+ + M   G+ PN  TY ++     +     +A +L+  M E+ 
Sbjct: 517 LIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQA 576

Query: 411 VRPKKSTIQLVADSWRAIG 429
             P   T++++ +   A+G
Sbjct: 577 CNPDYITMEILTEWLSAVG 595



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 108/439 (24%), Positives = 184/439 (41%), Gaps = 49/439 (11%)

Query: 1   MNILVGKGKPHEAHYIFN--CLIEEGHRPTL----ITYTTLVAALTRQKRFKS--ILSLI 52
           +N+L+  G+   A  + +   L E   RP      I +  L+     + R K   I  L+
Sbjct: 46  INLLLKSGRVDNAMNVLDEMLLPESEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLV 105

Query: 53  SKVEKDGMKPDSILFNAMINACSESGNVDEAMKIF------------------------- 87
           SK  K  + PD+I    +I+    SGN + A  I                          
Sbjct: 106 SKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKA 165

Query: 88  ----------QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN-----VK 132
                     +KMKD   +PT  T+  LI       + +++L++ + M  +K      V 
Sbjct: 166 REFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVA 225

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+   YN L+   C     EEA  ++ KM +    P   T+N L   Y + GE   A ++
Sbjct: 226 PDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKL 285

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             EM+N Q+ PN  T   +V G CK   +  A+ F   M++  +  N V +   I  F +
Sbjct: 286 FNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCN 345

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           + + +   + L  M + G  PD V + T++   + AG +     +   + +AG   D   
Sbjct: 346 VNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVC 405

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           +++L   + +  +  +A+  L  M   GV P+ V + T+IS +      + A    +KM 
Sbjct: 406 YNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMT 465

Query: 373 -EIGINPNLKTYETLLWGY 390
            E G++P + TY  L+  Y
Sbjct: 466 EEEGLSPTVFTYGALIHAY 484



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 102/434 (23%), Positives = 188/434 (43%), Gaps = 56/434 (12%)

Query: 68  NAMINACSESGNVDEAMKIFQKM--KDSGCKPTTST----YNTLIKGYGNVGKPEESLKL 121
           N +IN   +SG VD AM +  +M   +S  +P   T    +N L+K  G  G+ +E  ++
Sbjct: 43  NEIINLLLKSGRVDNAMNVLDEMLLPESEFRPNDKTAGIVFNNLLKIDGLEGRVKED-EI 101

Query: 122 LQLMSQ--DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
             L+S+    N+ P+      L+   C   +   AWN++  ++      DA   N L   
Sbjct: 102 AGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTG 161

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMK------E 233
             +  E  +   ++ +M++  ++P   T GI+++  CK   ++DA+    +MK      +
Sbjct: 162 LGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETK 221

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGL 290
           + V P+ +++N+LI G   +      ++AL LM +       P   TF+ +++ +  +G 
Sbjct: 222 VFVAPDTIMYNTLIDGLCKVGRQ---EEALCLMGKMRSDQCAPTTATFNCLINGYCRSGE 278

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           +    ++F++M  A IEP++   + L  G  +      A      M++ G+  N V +T 
Sbjct: 279 IEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTV 338

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA----------------- 393
            I+ +CN   M +AM   ++M + G  P+   Y TL+ G  +A                 
Sbjct: 339 FINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAG 398

Query: 394 ------------------KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
                              +  RA+E L  ME  GV+P   T   +   +  IG  + A 
Sbjct: 399 FCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAH 458

Query: 436 RVLKSAEEDRQSMP 449
           + +K   E+    P
Sbjct: 459 KFMKKMTEEEGLSP 472



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 47/97 (48%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P  + Y  L+ +L +Q +    LSL+  ++  G+ P++  +N++  A  +   +D+A K+
Sbjct: 509 PNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKL 568

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             +M +  C P   T   L +    VG+  +  K  Q
Sbjct: 569 MDRMVEQACNPDYITMEILTEWLSAVGEITKLKKFTQ 605


>gi|357150350|ref|XP_003575429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Brachypodium distachyon]
          Length = 684

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/406 (24%), Positives = 194/406 (47%), Gaps = 1/406 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    AH +F  +   G RP+   Y  L+ A  R     +      ++  DG +PD   +
Sbjct: 155 GLAQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPDCFTY 214

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +++   + G +DEA+++ ++M+ +G +P   TY  L+ G+ N G+PE+++ +   M +
Sbjct: 215 NTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTM-K 273

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +K V PN+ +Y  LV          +A+ ++ + +     P    +  +    ++     
Sbjct: 274 EKGVSPNEASYRTLVHGAFRCLGRHKAYVMLTEWLGREPPPHHSAWQCMLYCLSKNEMAK 333

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
              ++  +M +     +    GI+VS   K   + D    L    +   +P   V+  +I
Sbjct: 334 EVVEVTKKMNSRGYLLDNAIFGIVVSCAVKCLELSDLCGLLDDFVKKGGNPGFDVYIMVI 393

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           K  L  K S   +  L  M   G+   V +++ ++D +  AG + K  EI  +M + G+ 
Sbjct: 394 KSLLGCKSSSKANHYLKRMVLDGLLSGVTSYNMVIDCFVKAGAVDKAAEIIKEMREKGVL 453

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P++  F+ L  GY + G    A+++L  + ++G+ P+++ FT++I+G C+  ++  A   
Sbjct: 454 PNLVTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAFDC 513

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           + +M E G+ PN  TY  L+     A    +A +LL  M++ G+ P
Sbjct: 514 FNEMAEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITP 559



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 101/440 (22%), Positives = 192/440 (43%), Gaps = 34/440 (7%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           V  G    A+  F  +  +G +P   TY TLV  + ++      L L+ ++E  G++P+ 
Sbjct: 187 VRAGAVDTAYLRFQQMPADGCQPDCFTYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNV 246

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG---------------- 108
             +  +++    +G  ++A+ +F  MK+ G  P  ++Y TL+ G                
Sbjct: 247 FTYTMLVDGFCNAGRPEDAVHVFDTMKEKGVSPNEASYRTLVHGAFRCLGRHKAYVMLTE 306

Query: 109 -YGNVGKPEESLKLLQLMSQDKN----------VKPNDRTY-------NILVRAWCSKNS 150
             G    P  S     L    KN           K N R Y        I+V        
Sbjct: 307 WLGREPPPHHSAWQCMLYCLSKNEMAKEVVEVTKKMNSRGYLLDNAIFGIVVSCAVKCLE 366

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           + +   ++   V  G  P    Y  + ++      + +A   L  M  + +     +  +
Sbjct: 367 LSDLCGLLDDFVKKGGNPGFDVYIMVIKSLLGCKSSSKANHYLKRMVLDGLLSGVTSYNM 426

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++  + K G ++ A   +  M+E  V PNLV FN+LI G+  + +       L ++ E G
Sbjct: 427 VIDCFVKAGAVDKAAEIIKEMREKGVLPNLVTFNTLISGYSKLGNVHNAKAVLKMLMEHG 486

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           + PD++TF+++++       +    + F++M + G+ P+ H +++L      AG   KA 
Sbjct: 487 LIPDIITFTSLINGLCHTHQLDDAFDCFNEMAEWGVRPNAHTYNVLMHALCSAGHVNKAI 546

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +L  M+K G+ P+   F   I  +C   K+ +A +I+  M  +G+ P+  TY +L+   
Sbjct: 547 DLLNKMKKDGITPDAYSFNAPILSFCRMKKVDKARNIFNAMLRLGVVPDNYTYNSLIKAL 606

Query: 391 GEAKQPWRAEELLQVMEEKG 410
            + ++   A+E+L +ME  G
Sbjct: 607 CDERRIDEAKEILLLMESSG 626



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/439 (24%), Positives = 179/439 (40%), Gaps = 38/439 (8%)

Query: 43  KRFKSILS--LISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS 100
           +R  ++LS  L+++V   G +    L  A+I +    G    A ++F +M   G +P+T+
Sbjct: 118 RRGPAVLSAALVAEVRGCGCEVSEELLRALIASWGRLGLAQYAHEVFVQMPRLGLRPSTA 177

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
            YN LI      G  + +    Q M  D   +P+  TYN LV   C +  I+EA  +V +
Sbjct: 178 VYNALIVASVRAGAVDTAYLRFQQMPAD-GCQPDCFTYNTLVHGVCQRGIIDEALRLVRQ 236

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           M  +GI+P+  TY  L   +   G    A  +   M+   V PNE +   +V G  +   
Sbjct: 237 MEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTMKEKGVSPNEASYRTLVHGAFRCLG 296

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
              A   L      E  P+   +  ++      + +  V +    M   G   D   F  
Sbjct: 297 RHKAYVMLTEWLGREPPPHHSAWQCMLYCLSKNEMAKEVVEVTKKMNSRGYLLDNAIFGI 356

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG--------------------- 319
           ++        +     + DD VK G  P   V+ ++ K                      
Sbjct: 357 VVSCAVKCLELSDLCGLLDDFVKKGGNPGFDVYIMVIKSLLGCKSSSKANHYLKRMVLDG 416

Query: 320 --------------YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
                         +V+AG   KA  I+  MR+ GV PN+V F T+ISG+     +  A 
Sbjct: 417 LLSGVTSYNMVIDCFVKAGAVDKAAEIIKEMREKGVLPNLVTFNTLISGYSKLGNVHNAK 476

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           ++ + + E G+ P++ T+ +L+ G     Q   A +    M E GVRP   T  ++  + 
Sbjct: 477 AVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAFDCFNEMAEWGVRPNAHTYNVLMHAL 536

Query: 426 RAIGLAREAKRVLKSAEED 444
            + G   +A  +L   ++D
Sbjct: 537 CSAGHVNKAIDLLNKMKKD 555



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 112/229 (48%), Gaps = 2/229 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++  V  G   +A  I   + E+G  P L+T+ TL++  ++     +  +++  + + G+
Sbjct: 428 IDCFVKAGAVDKAAEIIKEMREKGVLPNLVTFNTLISGYSKLGNVHNAKAVLKMLMEHGL 487

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I F ++IN    +  +D+A   F +M + G +P   TYN L+    + G   +++ 
Sbjct: 488 IPDIITFTSLINGLCHTHQLDDAFDCFNEMAEWGVRPNAHTYNVLMHALCSAGHVNKAID 547

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M +D  + P+  ++N  + ++C    +++A N+   M+  G+ PD  TYN+L +A 
Sbjct: 548 LLNKMKKD-GITPDAYSFNAPILSFCRMKKVDKARNIFNAMLRLGVVPDNYTYNSLIKAL 606

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGI-IVSGYCKEGNMEDAMRFL 228
                   A+++L  M+++          + IVS   K G    A + +
Sbjct: 607 CDERRIDEAKEILLLMESSGSSATTHHTHLPIVSALTKTGQFSKAGQLM 655



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 118/250 (47%), Gaps = 6/250 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+G     +A++    ++ +G    + +Y  ++    +         +I ++ + G+ P+
Sbjct: 396 LLGCKSSSKANHYLKRMVLDGLLSGVTSYNMVIDCFVKAGAVDKAAEIIKEMREKGVLPN 455

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + FN +I+  S+ GNV  A  + + + + G  P   T+ +LI G  +  + +++     
Sbjct: 456 LVTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAFDCFN 515

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M++   V+PN  TYN+L+ A CS   + +A +++ KM   GI PDA ++N    ++ + 
Sbjct: 516 EMAE-WGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFNAPILSFCRM 574

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE-----LEVHP 238
            +  +A  +   M    V P+  T   ++   C E  +++A   L  M+         H 
Sbjct: 575 KKVDKARNIFNAMLRLGVVPDNYTYNSLIKALCDERRIDEAKEILLLMESSGSSATTHHT 634

Query: 239 NLVVFNSLIK 248
           +L + ++L K
Sbjct: 635 HLPIVSALTK 644



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 73/156 (46%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A   FN + E G RP   TY  L+ AL         + L++K++KDG+ PD+  FNA I
Sbjct: 509 DAFDCFNEMAEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFNAPI 568

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
            +      VD+A  IF  M   G  P   TYN+LIK   +  + +E+ ++L LM    + 
Sbjct: 569 LSFCRMKKVDKARNIFNAMLRLGVVPDNYTYNSLIKALCDERRIDEAKEILLLMESSGSS 628

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ 167
                T+  +V A        +A  ++ K     +Q
Sbjct: 629 ATTHHTHLPIVSALTKTGQFSKAGQLMNKYNRRNVQ 664



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 1/147 (0%)

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G E    +   L   + R G  Q A  +   M + G+ P+  ++  +I     A  +  A
Sbjct: 136 GCEVSEELLRALIASWGRLGLAQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAGAVDTA 195

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
              +++M   G  P+  TY TL+ G  +      A  L++ ME  G+RP   T  ++ D 
Sbjct: 196 YLRFQQMPADGCQPDCFTYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDG 255

Query: 425 WRAIGLAREAKRVLKSAEEDRQSMPNK 451
           +   G   +A  V  + +E   S PN+
Sbjct: 256 FCNAGRPEDAVHVFDTMKEKGVS-PNE 281


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 183/396 (46%), Gaps = 3/396 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           + G  P ++TY +L+  L +         L   ++     P  + +N +++    +G ++
Sbjct: 3   DHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLE 62

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
            AM +FQ+M D       S +N L+ G    GK E +L+  + M  D    PN  TY++L
Sbjct: 63  RAMALFQEMLDRRSHDVIS-FNILVTGLCRAGKIETALEFFRKM--DDRCSPNVITYSVL 119

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +   C  N + +A  ++  M A G  PD +TY  L     +  +   A ++L EM +   
Sbjct: 120 IDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGC 179

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            PN  T   ++ G C+   + DA+  +  M      PN+V + +LI G   +        
Sbjct: 180 VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACA 239

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
            L  M + G  PD++ ++ +++    A  + +   +    V  GI+PD+  +S +  G  
Sbjct: 240 MLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLC 299

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           R+    +A  +L  ++  G  P+V++++T+I G C A K+  A  +YE M   G + ++ 
Sbjct: 300 RSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVV 359

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           TY TL+ G  +A +   A  LL  M   G  P   T
Sbjct: 360 TYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMT 395



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 167/386 (43%), Gaps = 42/386 (10%)

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN--------------- 134
           M+D GC+P   TYN+LI G     +P+ + +L + M +     P+               
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHM-KSVECSPSMVTYNTLLDGLFRTG 59

Query: 135 -------------DR------TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
                        DR      ++NILV   C    IE A     KM      P+ +TY+ 
Sbjct: 60  KLERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNVITYSV 118

Query: 176 LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
           L     +     +A ++L  M+     P+  T  I+V G CKE  +  A   L  M +  
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 236 VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMG 292
             PNLV +NSL+ G    +    V  AL LM +    G  P+VVT+ T++D     G + 
Sbjct: 179 CVPNLVTYNSLLHGLCRARR---VSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVK 235

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
               +  DM+  G  PD+ ++++L  G  +A +  ++ ++L      G+ P+VV +++VI
Sbjct: 236 DACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVI 295

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
            G C + ++  A  +   +   G  P++  Y TL+ G  +A +   A +L +VM   G  
Sbjct: 296 YGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCD 355

Query: 413 PKKSTIQLVADSWRAIGLAREAKRVL 438
               T   + D     G   EA  +L
Sbjct: 356 ADVVTYSTLIDGLCKAGRVDEAHLLL 381



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 146/306 (47%), Gaps = 12/306 (3%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G  P L+TY +L+  L R +R    L+L+  +   G  P+ + +  +I+   + G 
Sbjct: 174 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 233

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V +A  +   M D G  P    YN LI G     + +ES+ LL+  +    +KP+  TY+
Sbjct: 234 VKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLR-RAVSGGIKPDVVTYS 292

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            ++   C  N ++EA  ++  + + G  PD + Y+TL     + G+   A  +   M  +
Sbjct: 293 SVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGD 352

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
               +  T   ++ G CK G +++A   L RM  +   P+ + +NSLIKG  D+   D  
Sbjct: 353 GCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEA 412

Query: 260 DKALTLMEEFGVKPDVVTFSTI------MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
            + +  ME     P  VT++ +      M+   SA L     + F +M+  G+ PD   +
Sbjct: 413 IELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAAL-----DYFQEMIDNGVIPDHITY 467

Query: 314 SILAKG 319
           SIL +G
Sbjct: 468 SILLEG 473



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 125/249 (50%), Gaps = 2/249 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A  +   +I++G  P L+ Y  L+  L +  +    ++L+ +    G+KPD + +
Sbjct: 232 GRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTY 291

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           +++I     S  +DEA ++   +K  GC P    Y+TLI G    GK +E+  L ++M+ 
Sbjct: 292 SSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTG 351

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           D     +  TY+ L+   C    ++EA  ++ +MV  G  P  +TYN+L +         
Sbjct: 352 D-GCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLD 410

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED-AMRFLYRMKELEVHPNLVVFNSL 246
            A +++ EM+ +   P+  T  I++ G C+   ++  A+ +   M +  V P+ + ++ L
Sbjct: 411 EAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSIL 470

Query: 247 IKGFLDIKD 255
           ++G    KD
Sbjct: 471 LEGLKKSKD 479



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 90/173 (52%), Gaps = 2/173 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P +I Y+TL+  L +  +      L   +  DG   D + ++ +I+   ++G VDEA
Sbjct: 318 GCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEA 377

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
             +  +M   G  P+T TYN+LIKG  ++   +E+++L++ M +  N  P+  TYNIL+ 
Sbjct: 378 HLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMER-SNCAPSAVTYNILIH 436

Query: 144 AWCSKNSIEEA-WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
             C    ++ A  +   +M+ +G+ PD +TY+ L     +  + +    ++ +
Sbjct: 437 GMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLD 489


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 182/383 (47%), Gaps = 1/383 (0%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
           L ++T L+    R  R    LS++ K+ K G +P  + F ++++       + +A  +  
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
            M  SG +P    YNTLI G    G+   +L+LL  M + K +  +  TYN L+   C  
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM-EKKGLGADVVTYNTLLTGLCYS 224

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
               +A  ++  M+   I PD VT+  L   + + G    A+++  EM  + V PN  T 
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             I++G C  G + DA +    M      PN+V +N+LI GF   +  D   K    M  
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G   D+ T++T++  +   G +    +IF  MV   + PDI    IL  G    GE + 
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A      MR+   +  +V +  +I G C A K+++A  ++ ++   G+ P+ +TY  ++ 
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464

Query: 389 GYGEAKQPWRAEELLQVMEEKGV 411
           G  +      A+EL++ M+E+G+
Sbjct: 465 GLCKNGPRREADELIRRMKEEGI 487



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/433 (24%), Positives = 201/433 (46%), Gaps = 1/433 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  +F  ++     P+++ +T L+ A    +R+++++    K+E  G+  D   F  +I
Sbjct: 54  DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           +       +  A+ +  KM   G +P+  T+ +L+ G+  V +  ++  L+ LM +    
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK-SGY 172

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +PN   YN L+   C    +  A  ++ +M   G+  D VTYNTL       G    A +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           ML +M    + P+  T   ++  + K+GN+++A      M +  V PN V +NS+I G  
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
                    K   LM   G  P+VVT++T++  +    ++ +  ++F  M   G   DI 
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            ++ L  GY + G+ + A  I   M    V P+++    ++ G C   +++ A+  ++ M
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
            E      +  Y  ++ G  +A +  +A EL   +  +GV+P   T  ++       G  
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 472

Query: 432 REAKRVLKSAEED 444
           REA  +++  +E+
Sbjct: 473 READELIRRMKEE 485



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 148/306 (48%), Gaps = 7/306 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+ + A  + N + ++G    ++TY TL+  L    R+     ++  + K  + PD
Sbjct: 186 LCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPD 245

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + F A+I+   + GN+DEA +++++M  S   P   TYN++I G    G+  ++ K   
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           LM+  K   PN  TYN L+  +C    ++E   +  +M   G   D  TYNTL   Y Q 
Sbjct: 306 LMAS-KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQV 364

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A  +   M + +V P+  T  I++ G C  G +E A+     M+E E +  +V +
Sbjct: 365 GKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAY 424

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           N +I G   +  +D V+KA  L       GVKPD  T++ ++      G   +  E+   
Sbjct: 425 NIMIHG---LCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRR 481

Query: 301 MVKAGI 306
           M + GI
Sbjct: 482 MKEEGI 487



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 79/333 (23%), Positives = 158/333 (47%), Gaps = 1/333 (0%)

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           ++A  +F +M  S   P+   +  L+    N+ + E  +   Q M +   +  +  ++ I
Sbjct: 53  EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKM-ELYGISHDLYSFTI 111

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+  +C  + +  A +V+ KM+  G +P  VT+ +L   +        A  ++  M  + 
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
             PN      ++ G CK G +  A+  L  M++  +  ++V +N+L+ G           
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           + L  M +  + PDVVTF+ ++D +   G + + QE++ +M+++ ++P+   ++ +  G 
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
              G    A+     M   G  PNVV + T+ISG+C    +   M ++++M   G N ++
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            TY TL+ GY +  +   A ++   M  + V P
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTP 384



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 138/292 (47%), Gaps = 6/292 (2%)

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF---EMQNNQVRPNERT 207
            E+A+ + ++MV S   P  V +  L  A A      R E +++   +M+   +  +  +
Sbjct: 52  FEDAFALFFEMVHSQPLPSIVDFTRLLTATAN---LRRYETVIYFSQKMELYGISHDLYS 108

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
             I++  +C+   +  A+  L +M +L   P++V F SL+ GF  +         + LM 
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
           + G +P+VV ++T++D     G +    E+ ++M K G+  D+  ++ L  G   +G   
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            A  +L  M K  ++P+VV FT +I  +     +  A  +Y++M +  ++PN  TY +++
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            G     + + A++   +M  KG  P   T   +   +    +  E  ++ +
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 1/233 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +++ V +G   EA  ++  +I+    P  +TY +++  L    R          +   G 
Sbjct: 253 IDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGC 312

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +N +I+   +   VDE MK+FQ+M   G      TYNTLI GY  VGK   +L 
Sbjct: 313 FPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALD 372

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M   + V P+  T+ IL+   C    IE A      M  S      V YN +    
Sbjct: 373 IFCWMVS-RRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL 431

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
            +  +  +A ++   +    V+P+ RT  I++ G CK G   +A   + RMKE
Sbjct: 432 CKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 116/274 (42%), Gaps = 24/274 (8%)

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           + P+ +     ARA++ Y E  R                        +G+      EDA 
Sbjct: 21  VNPNLLGGGAAARAFSDYREKLR------------------------TGFLHSIRFEDAF 56

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
              + M   +  P++V F  L+    +++  + V      ME +G+  D+ +F+ ++  +
Sbjct: 57  ALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCF 116

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
                +     +   M+K G EP I  F  L  G+        A S++  M K G  PNV
Sbjct: 117 CRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNV 176

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
           V++ T+I G C   ++  A+ +  +M + G+  ++ TY TLL G   + +   A  +L+ 
Sbjct: 177 VVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRD 236

Query: 406 MEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           M ++ + P   T   + D +   G   EA+ + K
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYK 270


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 193/368 (52%), Gaps = 1/368 (0%)

Query: 20   LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
            +++ G +P+++T  +L+    +  RF+  +SL+  + + G++P+ +++N +IN   ++ +
Sbjct: 676  MMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRD 735

Query: 80   VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
            ++ A++IF  M+  G      TYNTLI G  N G+  ++ +LL+ M + K + PN   + 
Sbjct: 736  LNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRK-IDPNVIFFT 794

Query: 140  ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
             L+  +  + ++ EA N+  +M+   + P+ +TYN+L   +   G    A+ M   M + 
Sbjct: 795  ALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSK 854

Query: 200  QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
               P+  T   +++G+CK   +ED M+    M    +  +   +N+LI G+      +  
Sbjct: 855  GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVA 914

Query: 260  DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
             K    M + GV PD+VT++ ++D   + G + K   + +D+ K  ++ DI  ++I+ +G
Sbjct: 915  QKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQG 974

Query: 320  YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
              R  + ++A  +  S+ + GV  + + + T+ISG C     + A  +  +M E G  P+
Sbjct: 975  MCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPS 1034

Query: 380  LKTYETLL 387
             + Y+  L
Sbjct: 1035 ERIYDETL 1042



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 186/401 (46%), Gaps = 1/401 (0%)

Query: 15   YIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINAC 74
            Y+F+ +   G    L ++T L+    R  RF   L+L+ K+ K G +P  +   +++N  
Sbjct: 636  YLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGF 695

Query: 75   SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
             +     EA+ +   M + G +P    YNT+I G         +L++   M + K +  +
Sbjct: 696  CQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEK-KGIVAD 754

Query: 135  DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
              TYN L+   C+     +A  ++  MV   I P+ + +  L   + + G    A+ +  
Sbjct: 755  AVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYK 814

Query: 195  EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
            EM    V PN  T   +++G+C +G + DA      M      P++V +N+LI GF   K
Sbjct: 815  EMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSK 874

Query: 255  DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
              +   K    M   G+  D  T++T++  +  AG +   Q++F+ MV  G+ PDI  ++
Sbjct: 875  RVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYN 934

Query: 315  ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            IL       G+ +KA  ++  ++K  +  +++ +  +I G C   K++ A  ++  +   
Sbjct: 935  ILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRK 994

Query: 375  GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
            G+  +   Y T++ G         A++L   M+E G  P +
Sbjct: 995  GVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSE 1035



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 173/383 (45%)

Query: 29  LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
           L ++T L+    R  R    LS++ K+ K G  P  + F ++++       + +A  +  
Sbjct: 100 LYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVA 159

Query: 89  KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
            M  SG +P    YNTLI      G    +L+LL  M +   +  +  TYN L+   C  
Sbjct: 160 SMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYS 219

Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
               +A  ++  M    I PD  T+  L  A+ + G    A+++  +M  + + PN  T 
Sbjct: 220 GEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTY 279

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
             +++G C  G +  A +    M      PN+V +N+LI GF   +  +   K    M  
Sbjct: 280 NSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYR 339

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G+  D  T++T++  +   G +   ++IF  MV  G+ PDI    IL  G    GE   
Sbjct: 340 EGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGS 399

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A      MR    +  +V +  +I G C A K++ A  ++ ++   G+ P+ +TY  ++ 
Sbjct: 400 AMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMIL 459

Query: 389 GYGEAKQPWRAEELLQVMEEKGV 411
           G  +      A+EL + M+E G+
Sbjct: 460 GLCKNGPRREADELFRRMKEDGI 482



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/419 (24%), Positives = 196/419 (46%), Gaps = 2/419 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P+++ +T L+ A+   +R+++++    ++E  G+  D   F  +I+       +  A+ I
Sbjct: 63  PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSI 122

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             KM   G  P+  T+ +L+ G+    +  ++  L+  M +    +PN   YN L+   C
Sbjct: 123 LGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVK-SGYEPNVVVYNTLIDCLC 181

Query: 147 SKNSIEEAWNVVYKMVASG-IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
               +  A  ++ +M   G +  D VTYNTL       GE  +A ++L +M   ++ P+ 
Sbjct: 182 KNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDV 241

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   ++  + K+GN+++A     +M +  + PN V +NSLI G           K   L
Sbjct: 242 FTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDL 301

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M   G  P+VVT++T+++ +  +  +    ++F  M + G+  D   ++ L  GY + G+
Sbjct: 302 MASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGK 361

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            + A+ I + M   GV P+++    ++ G C   ++  AM  +  M        +  Y  
Sbjct: 362 LRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNI 421

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           ++ G  +A +   A EL   +  +GV+P   T  ++       G  REA  + +  +ED
Sbjct: 422 MIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKED 480



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 181/358 (50%), Gaps = 2/358 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G+ P+++T+ +L+     + R     SL++ + K G +P+ +++N +I+   ++G+
Sbjct: 126 MMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGD 185

Query: 80  VDEAMKIFQKMKDSG-CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
           V+ A+++  +M+  G       TYNTL+ G    G+  ++ ++L+ M++ + + P+  T+
Sbjct: 186 VNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTK-RRINPDVFTF 244

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
             L+ A+  + +++EA  +  +M+ S I P+ VTYN+L      +G  Y A++    M +
Sbjct: 245 TALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMAS 304

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
               PN  T   +++G+CK   +ED M+   RM    +  +   +N+LI G+  +     
Sbjct: 305 KGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRV 364

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
                + M   GV PD++T   ++      G +G     F+DM        I  ++I+  
Sbjct: 365 AKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIH 424

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
           G  +A + ++A  +   +   GV P+   +T +I G C     + A  ++ +M E GI
Sbjct: 425 GLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGI 482



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 173/392 (44%), Gaps = 50/392 (12%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG------- 59
           + + H+A  +   +++ G+ P ++ Y TL+  L +       L L++++EK G       
Sbjct: 148 RNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLV 207

Query: 60  -----------------------------MKPDSILFNAMINACSESGNVDEAMKIFQKM 90
                                        + PD   F A+I+A  + GN+DEA +++++M
Sbjct: 208 TYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQM 267

Query: 91  KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
             S   P T TYN+LI G    G+   + K   LM+  K   PN  TYN L+  +C    
Sbjct: 268 LQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMAS-KGCFPNVVTYNTLINGFCKSRR 326

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           +E+   +  +M   G+  D  TYNTL   Y Q G+   A+ +   M +  V P+  T  I
Sbjct: 327 VEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCI 386

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF- 269
           ++ G C  G +  AM     M+  E +  +V +N +I G   +  +D V++A  L     
Sbjct: 387 LLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHG---LCKADKVEEAWELFCRLP 443

Query: 270 --GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI---EPDIHVFSILAKGYVRAG 324
             GVKPD  T++ ++      G   +  E+F  M + GI     D H+        V  G
Sbjct: 444 VEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAEDGHLGEHGTNNQVSLG 503

Query: 325 E----PQKAESILTSMRKYGVHPNVVMFTTVI 352
                P++  SI+ S   Y  + +  ++++++
Sbjct: 504 TIIICPKRRRSIMESGDLYYYYSDTTLWSSLV 535



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 161/334 (48%), Gaps = 2/334 (0%)

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           ++A+ +F +M  S   P+   +  L+    N+ + E  +   Q M +   +  +  ++ I
Sbjct: 47  EDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQM-ELFGISHDLYSFTI 105

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+  +C  + +  A +++ KM+  G  P  VT+ +L   +      + A  ++  M  + 
Sbjct: 106 LIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSG 165

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRM-KELEVHPNLVVFNSLIKGFLDIKDSDGV 259
             PN      ++   CK G++  A+  L  M K+  +  +LV +N+L+ G     +    
Sbjct: 166 YEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQA 225

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            + L  M +  + PDV TF+ ++DA+   G + + QE++  M+++ I P+   ++ L  G
Sbjct: 226 ARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLING 285

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
               G    A+     M   G  PNVV + T+I+G+C + +++  M ++++M   G+  +
Sbjct: 286 LCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGD 345

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
             TY TL+ GY +  +   A+++   M   GV P
Sbjct: 346 TFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTP 379



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/343 (22%), Positives = 165/343 (48%), Gaps = 1/343 (0%)

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
           D+A  +F +M  S   P+   +  ++     + K +  + L   M ++  +  +  ++ I
Sbjct: 597 DDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKM-ENLGISHDLYSFTI 655

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+  +C  +    A  ++ KM+  G QP  VT  +L   + Q      A  ++  M    
Sbjct: 656 LIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELG 715

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           + PN      +++G CK  ++ +A+   Y M++  +  + V +N+LI G  +        
Sbjct: 716 LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAA 775

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           + L  M +  + P+V+ F+ ++D +   G + + + ++ +M++  + P+I  ++ L  G+
Sbjct: 776 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGF 835

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
              G    A+ +   M   G  P+VV + T+I+G+C + +++  M ++ +M   G+  + 
Sbjct: 836 CIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDA 895

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
            TY TL+ GY +A +   A+++   M + GV P   T  ++ D
Sbjct: 896 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLD 938



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 160/325 (49%), Gaps = 1/325 (0%)

Query: 114 KPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY 173
           K +++  L   M Q + + P+   +  ++ A    N  +    + +KM   GI  D  ++
Sbjct: 595 KFDDAFGLFCEMLQSRPI-PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSF 653

Query: 174 NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
             L   + +      A  +L +M     +P+  T G +++G+C+    ++A+  +  M E
Sbjct: 654 TILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAE 713

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
           L + PN+V++N++I G    +D +   +    ME+ G+  D VT++T++    ++G    
Sbjct: 714 LGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTD 773

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
              +  DMVK  I+P++  F+ L   +V+ G   +A+++   M +  VHPN++ + ++I+
Sbjct: 774 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLIN 833

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G+C   ++  A  +++ M   G  P++ TY TL+ G+ ++K+     +L   M  +G+  
Sbjct: 834 GFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVG 893

Query: 414 KKSTIQLVADSWRAIGLAREAKRVL 438
              T   +   +   G    A++V 
Sbjct: 894 DAFTYNTLIHGYCQAGKLNVAQKVF 918



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 105/480 (21%), Positives = 190/480 (39%), Gaps = 76/480 (15%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++  V +G   EA  ++  +++    P  +TY +L+  L    R          +   G 
Sbjct: 248 IDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGC 307

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +N +IN   +S  V++ MK+FQ+M   G    T TYNTLI GY  VGK   +  
Sbjct: 308 FPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKD 367

Query: 121 LLQLMSQ------------------------DKNVKPNDR----------TYNILVRAWC 146
           +   M                             VK ND            YNI++   C
Sbjct: 368 IFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLC 427

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV----- 201
             + +EEAW +  ++   G++PDA TY  +     + G    A+++   M+ + +     
Sbjct: 428 KADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAE 487

Query: 202 --------RPNERTCG-IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
                     N+ + G II+    +   ME    + Y       + +  +++SL+ G + 
Sbjct: 488 DGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYY-------YSDTTLWSSLV-GLIP 539

Query: 253 IKDSDGVD----KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI--------FDD 300
           I  S  V     + L L+E  G  P+  +FS               + +        FDD
Sbjct: 540 IASSSSVKGFVRRHLLLLER-GNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDD 598

Query: 301 -------MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
                  M+++   P I  F+ +     +  +      +   M   G+  ++  FT +I 
Sbjct: 599 AFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIH 658

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            +C   +   A+++  KM ++G  P++ T  +LL G+ +  +   A  L+  M E G+ P
Sbjct: 659 CFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEP 718



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 132/285 (46%), Gaps = 2/285 (0%)

Query: 4    LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
            L   G+  +A  +   +++    P +I +T L+    ++       +L  ++ +  + P+
Sbjct: 765  LCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPN 824

Query: 64   SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             + +N++IN     G + +A  +F  M   GC P   TYNTLI G+    + E+ +KL  
Sbjct: 825  ILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 884

Query: 124  LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
             M+  + +  +  TYN L+  +C    +  A  V  +MV  G+ PD VTYN L       
Sbjct: 885  EMTH-QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNN 943

Query: 184  GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            G+  +A  M+ ++Q NQ+  +  T  II+ G C+   +++A      +    V  + + +
Sbjct: 944  GKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAY 1003

Query: 244  NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS-TIMDAWSS 287
             ++I G          DK  T M+E G  P    +  T+ D ++S
Sbjct: 1004 ITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLRDHYTS 1048



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 114/248 (45%), Gaps = 1/248 (0%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            ++  V +G   EA  ++  +I     P ++TY +L+     Q R      +   +   G 
Sbjct: 797  IDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGC 856

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             PD + +N +I    +S  V++ MK+F +M   G      TYNTLI GY   GK   + K
Sbjct: 857  FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQK 916

Query: 121  LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            +   M  D  V P+  TYNIL+   C+   IE+A  +V  +  + +  D +TYN + +  
Sbjct: 917  VFNRMV-DCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGM 975

Query: 181  AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
             +  +   A  +   +    V+ +      ++SG C+ G   +A +   RMKE    P+ 
Sbjct: 976  CRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSE 1035

Query: 241  VVFNSLIK 248
             +++  ++
Sbjct: 1036 RIYDETLR 1043



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 1/228 (0%)

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           +G+      EDA+     M + +  P++V F  L+    +++  + V      ME FG+ 
Sbjct: 38  TGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGIS 97

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
            D+ +F+ ++  +     +     I   M+K G +P I  F  L  G+        A S+
Sbjct: 98  HDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSL 157

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG-INPNLKTYETLLWGYG 391
           + SM K G  PNVV++ T+I   C    +  A+ +  +M + G +  +L TY TLL G  
Sbjct: 158 VASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLC 217

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            + +  +A  +L+ M ++ + P   T   + D++   G   EA+ + K
Sbjct: 218 YSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYK 265



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 26/109 (23%), Positives = 51/109 (46%)

Query: 1    MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
            ++ L   GK  +A  +   L +      +ITY  ++  + R  + K    L   + + G+
Sbjct: 937  LDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGV 996

Query: 61   KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY 109
            K D+I +  MI+    +G   EA K+  +MK+ G  P+   Y+  ++ +
Sbjct: 997  KLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLRDH 1045


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 196/399 (49%), Gaps = 8/399 (2%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           F  +I +G  P++     ++  L   +      ++   + + G+ P  I FN M+++C +
Sbjct: 228 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 287

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK-NVKPND 135
           +G+++   KI+ +MK    + +  TYN LI G+   GK EE+ +    M +    V P  
Sbjct: 288 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTP-- 345

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            ++N L+  +C +   ++AW V  +M+ +GI P   TYN    A   +G    A ++L  
Sbjct: 346 YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSS 405

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M      P+  +   ++ GY K G   +A      ++  ++HP++V +N+LI G  +  +
Sbjct: 406 M----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGN 461

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            +G  +    M    + PDV+T++T++  +   G +    E++D+M++ GI+PD + ++ 
Sbjct: 462 LEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT 521

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVH-PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            A G +R G+  KA  +   M     H P++ ++   I G C    + +A+    K+  +
Sbjct: 522 RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV 581

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G+ P+  TY T++ GY E  Q   A  L   M  K + P
Sbjct: 582 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYP 620



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 218/442 (49%), Gaps = 7/442 (1%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           ++A  ++  +IE G  PT+IT+ T++ +  +    + +  +  ++++  ++   + +N +
Sbjct: 257 NKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 316

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           IN  S++G ++EA +    M+ SG   T  ++N LI+GY   G  +++  +   M  +  
Sbjct: 317 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEM-LNAG 375

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           + P   TYNI + A C    I++A  ++  M A    PD V+YNTL   Y + G+   A 
Sbjct: 376 IYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEAS 431

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            +  +++   + P+  T   ++ G C+ GN+E A R    M    + P+++ + +L+KGF
Sbjct: 432 LLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGF 491

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE-PD 309
           +   +     +    M   G+KPD   ++T        G   K   + ++MV      PD
Sbjct: 492 VKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPD 551

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
           + ++++   G  + G   KA      + + G+ P+ V +TTVI G+    + + A ++Y+
Sbjct: 552 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYD 611

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           +M    + P++ TY  L++G+ +A +  +A +    M+++GVRP   T   +       G
Sbjct: 612 EMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAG 671

Query: 430 LAREAKRVLKSAEEDRQSMPNK 451
              EA R L   EE+    PNK
Sbjct: 672 NIDEAYRYLCKMEEEGIP-PNK 692



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 202/456 (44%), Gaps = 34/456 (7%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NIL+      GK  EA      +   G   T  ++  L+    +Q  F     +  ++  
Sbjct: 314 NILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLN 373

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK-PE 116
            G+ P +  +N  I A  + G +D+A ++   M      P   +YNTL+ GY  +GK  E
Sbjct: 374 AGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVE 429

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
            SL    L + D  + P+  TYN L+   C   ++E A  +  +M    I PD +TY TL
Sbjct: 430 ASLLFDDLRAGD--IHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTL 487

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
            + + + G    A ++  EM    ++P+         G  + G+ + A R    M   + 
Sbjct: 488 VKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDH 547

Query: 237 H-PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMG 292
           H P+L ++N  I G   + +   + KA+    +    G+ PD VT++T++  +   G   
Sbjct: 548 HAPDLTIYNVRIDGLCKVGN---LVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFK 604

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
             + ++D+M++  + P +  + +L  G+ +AG  ++A    T M+K GV PNV+    ++
Sbjct: 605 MARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALL 664

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
            G C A  +  A     KM E GI PN  +Y  L+    + ++     +L + M +K + 
Sbjct: 665 YGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIE 724

Query: 413 PKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSM 448
           P   T                 + + K  E+D +SM
Sbjct: 725 PDGYT----------------HRALFKHLEKDHESM 744



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/331 (24%), Positives = 154/331 (46%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+  +  GK  EA  +F+ L      P+++TY TL+  L      +    L  ++    +
Sbjct: 418 MHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI 477

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I +  ++    ++GN+  A +++ +M   G KP    Y T   G   +G  +++ +
Sbjct: 478 FPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFR 537

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M    +  P+   YN+ +   C   ++ +A     K+   G+ PD VTY T+ R Y
Sbjct: 538 LHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGY 597

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A  +  EM   ++ P+  T  +++ G+ K G +E A ++   MK+  V PN+
Sbjct: 598 LENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNV 657

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +  N+L+ G     + D   + L  MEE G+ P+  +++ ++          +  +++ +
Sbjct: 658 MTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKE 717

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           M+   IEPD +    L K   +  E    +S
Sbjct: 718 MLDKEIEPDGYTHRALFKHLEKDHESMALDS 748



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 117/260 (45%), Gaps = 2/260 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISK-VEKDGMKP 62
            V  G    A  +++ ++ +G +P    YTT      R         L  + V  D   P
Sbjct: 491 FVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAP 550

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D  ++N  I+   + GN+ +A++  +K+   G  P   TY T+I+GY   G+ + +  L 
Sbjct: 551 DLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLY 610

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             M + K + P+  TY +L+        +E+A+    +M   G++P+ +T+N L     +
Sbjct: 611 DEMLR-KRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCK 669

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G    A + L +M+   + PN+ +  +++S  C     E+ ++    M + E+ P+   
Sbjct: 670 AGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYT 729

Query: 243 FNSLIKGFLDIKDSDGVDKA 262
             +L K      +S  +D +
Sbjct: 730 HRALFKHLEKDHESMALDSS 749



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 85/412 (20%), Positives = 161/412 (39%), Gaps = 87/412 (21%)

Query: 114 KPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ--PDAV 171
           KPE + +    + +  +VK + + +  ++      + + EA+ V  + +  G+    D +
Sbjct: 135 KPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHEIDDLL 194

Query: 172 TYNTLARAYAQ---------YGETYRAEQMLF---EMQNNQVRPNERTCGIIVSGYCKEG 219
              +  +  A          Y +   AE+ L    +M      P+ R C I++       
Sbjct: 195 IDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSR 254

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
            M  A      M E  + P ++ FN+++       D + VDK    M+   ++   VT++
Sbjct: 255 MMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYN 314

Query: 280 TIMDAWSSAGLM---------------------------GKC-QEIFDD-------MVKA 304
            +++ +S  G M                           G C Q +FDD       M+ A
Sbjct: 315 ILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNA 374

Query: 305 GIEP-------------------------------DIHVFSILAKGYVRAGEPQKAESIL 333
           GI P                               D+  ++ L  GY++ G+  +A  + 
Sbjct: 375 GIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLF 434

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             +R   +HP++V + T+I G C +  ++ A  + E+M    I P++ TY TL+ G+ + 
Sbjct: 435 DDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKN 494

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR--EAKRVLKSAEE 443
                A E+   M  KG++P        A + RA+G  R  ++ +  +  EE
Sbjct: 495 GNLSMATEVYDEMLRKGIKPDG-----YAYTTRAVGELRLGDSDKAFRLHEE 541


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 181/371 (48%), Gaps = 1/371 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           EG  PT++TY  ++  L +  + ++      ++   G++PD I +N+++N   ++G++ E
Sbjct: 337 EGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKE 396

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+ +F  ++ +G  PT  TYN LI GY  +G  EE+ +L + M + +   P+  TY IL+
Sbjct: 397 ALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVE-QGCLPDVCTYTILM 455

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
           +   +  S+  A     +M++ G+QPD   YNT  RA    G   +A ++   M    + 
Sbjct: 456 KGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGIS 515

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
            +  T  I++ G CK GN+ DA     +M    + P+ + +  LI    +        K 
Sbjct: 516 SDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKF 575

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              M   G+ P  VT++  + A+   G +      F  M++ G+EP+   +++L     R
Sbjct: 576 FKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCR 635

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G  Q A      M + G+ PN   +T +I G C     + AM  Y +M + GI+P+  T
Sbjct: 636 TGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLT 695

Query: 383 YETLLWGYGEA 393
           ++ L  G+ E 
Sbjct: 696 HKALFKGFDEG 706



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 206/437 (47%), Gaps = 11/437 (2%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK--DGMKPDSILFNAMINACSES 77
           +++ G  P+++TY TL+ +  ++ R   +  L+ ++E    G  P+ +  N +I   +  
Sbjct: 228 MLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARK 287

Query: 78  GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQDKNVKPN 134
           G+++EA ++ + M+ S  K ++ TYN LI G    G V K ++    LQL  +++ + P 
Sbjct: 288 GDLEEAAEMVEGMRLSK-KASSFTYNPLITGLLAKGFVKKADD----LQLEMENEGIMPT 342

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
             TYN ++        +E A     +M A G+QPD +TYN+L   Y + G    A  +  
Sbjct: 343 VVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFG 402

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           ++++  + P   T  I++ GYC+ G++E+A R    M E    P++  +  L+KG  +  
Sbjct: 403 DLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNAC 462

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
                 +    M   G++PD   ++T + A  + G + K   + + M+  GI  D   ++
Sbjct: 463 SLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYN 522

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
           IL  G  + G    A+ +   M   G+ P+ + +T +I   C    ++ A   ++ M   
Sbjct: 523 ILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISD 582

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G+ P+  TY   +  Y      + A    + M E+GV P + T  ++  +    G  + A
Sbjct: 583 GLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLA 642

Query: 435 KRVLKSAEEDRQSMPNK 451
            R      E R  +PNK
Sbjct: 643 YRHFHEMLE-RGLVPNK 658



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/411 (23%), Positives = 197/411 (47%), Gaps = 4/411 (0%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           F+ +   G  P +     ++  L+   R+  I ++ +++ + G++P  + +N ++++  +
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249

Query: 77  SGNVDEAMKIFQKM--KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
            G  D+   + ++M  + SGC P   T+N +I G    G  EE+ ++++ M   K  K +
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK--KAS 307

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLF 194
             TYN L+    +K  +++A ++  +M   GI P  VTYN +     Q G+   A+    
Sbjct: 308 SFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFV 367

Query: 195 EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           EM+   ++P+  T   +++GYCK G++++A+     ++   + P ++ +N LI G+  + 
Sbjct: 368 EMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLG 427

Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           D +   +    M E G  PDV T++ +M    +A  +   +E FD+M+  G++PD   ++
Sbjct: 428 DLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYN 487

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
              +  +  G   KA  +   M   G+  + V +  +I G C    +  A  +  KM   
Sbjct: 488 TRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHN 547

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           G+ P+  TY  L+  + E      A +  + M   G+ P   T  +   ++
Sbjct: 548 GLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAY 598



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 134/261 (51%), Gaps = 17/261 (6%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLV------AALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           A   F+ ++ +G +P    Y T +       A+ +  R + ++ L      +G+  D++ 
Sbjct: 467 AREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMML------EGISSDTVT 520

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +N +I+   ++GN+++A  +  KM  +G +P   TY  LI  +   G   E+ K  + M 
Sbjct: 521 YNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMI 580

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            D  + P+  TY + + A+C + ++  A+    KM+  G++P+ +TYN L  A  + G T
Sbjct: 581 SD-GLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRT 639

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A +   EM    + PN+ T  +++ G CKEGN EDAMRF + M +  +HP+ +   +L
Sbjct: 640 QLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKAL 699

Query: 247 IKGFLDIKDSDGVDKALTLME 267
            KGF    D   ++ A+  +E
Sbjct: 700 FKGF----DEGHMNHAIEYLE 716


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 203/448 (45%), Gaps = 23/448 (5%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKS--ILSLISKVEKDGMKPDSILF--- 67
           A+ +FN +   G  P  + Y   + ++  Q+   +  +L L+ KV ++ +    +L    
Sbjct: 360 AYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVN 419

Query: 68  NAMINAC-SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            A  + C    G  ++A +I ++M   G  P TSTY  +I       K E+S  L Q M 
Sbjct: 420 TANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMK 479

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +   V P+  TY IL+ ++C    IE+A +   +M + G  P+ VTY  L  AY +  + 
Sbjct: 480 R-AGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQL 538

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM--------------- 231
            +A  +   M +    PN  T   ++ G CK G ++ A     ++               
Sbjct: 539 IQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEG 598

Query: 232 -KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
                + PN+V + +LI G    +      + L  M   G +P+ + +  ++D +   G 
Sbjct: 599 NDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGK 658

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           +   QE+F  M K G  P +H ++ L     + G    A  +L+ M     +PNVV +T 
Sbjct: 659 IDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTA 718

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I G     ++++A+++   M E G +PN+ TY  L+ G G+  +   + +L + M  KG
Sbjct: 719 MIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKG 778

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVL 438
             P   T +++ +   A GL  EA  +L
Sbjct: 779 CAPNYVTYRVLINHCCAAGLLDEAHLLL 806



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/473 (23%), Positives = 202/473 (42%), Gaps = 64/473 (13%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P ++TY TL++   ++K+F     +I+ +  +G  P+  LFN++++    +G+   A K+
Sbjct: 304 PNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKL 363

Query: 87  FQKMKDSGCKPTTSTYNTLI---------------------------------------- 106
           F +M   G  P    YN  I                                        
Sbjct: 364 FNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANF 423

Query: 107 -KGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
            +    VGK E++ ++L+ M + K   P+  TY  ++   C    +E+++ +  +M  +G
Sbjct: 424 SRCLCGVGKFEKAFQILKEMMR-KGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAG 482

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           + PD  TY  L  ++ + G   +A     EM++    PN  T   ++  Y K   +  A 
Sbjct: 483 VNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAH 542

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---------------- 269
              +RM +   +PN V +++LI G     +   + KA  + E+                 
Sbjct: 543 DIFHRMVDAACYPNAVTYSALIDGLCKAGE---IQKACEVYEKLIGTSGNVESDFYFEGN 599

Query: 270 ---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
               + P+VVT+  ++D    A  +    E+ D M+ AG EP+  V+  L  G+ + G+ 
Sbjct: 600 DTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKI 659

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             A+ +   M K G  P+V  +T++I       ++  AM +  +M     NPN+ TY  +
Sbjct: 660 DNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAM 719

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + G  +  +  +A  LL +MEEKG  P   T   + D     G A  + ++ K
Sbjct: 720 IDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFK 772



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 176/385 (45%), Gaps = 22/385 (5%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G GK  +A  I   ++ +G  P   TYT ++  L + K+ +    L  ++++ G+ PD
Sbjct: 427 LCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPD 486

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +  +I++  ++G +++A   F +M+  GC P   TY  L+  Y    +  ++  +  
Sbjct: 487 VYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFH 546

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D    PN  TY+ L+   C    I++A  V  K++ +    ++  Y          
Sbjct: 547 RMV-DAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFY---------- 595

Query: 184 GETYRAEQMLFEMQNN-QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                     FE  +   + PN  T G ++ G CK   + DA   L  M      PN +V
Sbjct: 596 ----------FEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIV 645

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +++LI GF  I   D   +    M + G  P V T+++++D     G +    ++  +M+
Sbjct: 646 YDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEML 705

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
                P++  ++ +  G  + GE +KA ++L+ M + G  PNVV +T +I G     K  
Sbjct: 706 NDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKAD 765

Query: 363 RAMSIYEKMCEIGINPNLKTYETLL 387
            ++ ++++M   G  PN  TY  L+
Sbjct: 766 ASLKLFKQMNSKGCAPNYVTYRVLI 790



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/464 (21%), Positives = 199/464 (42%), Gaps = 51/464 (10%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +  L    K  ++  +F  +   G  P + TYT L+ +  +    +   S   ++   G 
Sbjct: 459 ITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGC 518

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + + A+++A  +S  + +A  IF +M D+ C P   TY+ LI G    G+ +++ +
Sbjct: 519 SPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACE 578

Query: 121 LLQ-LMSQDKNVK--------------PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
           + + L+    NV+              PN  TY  L+   C    + +A  ++  M+A+G
Sbjct: 579 VYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAG 638

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
            +P+ + Y+ L   + + G+   A+++   M      P+  T   ++    K+G ++ AM
Sbjct: 639 CEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 698

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           + L  M     +PN+V + ++I G   + + +     L+LMEE G  P+VVT++ ++D  
Sbjct: 699 KVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGL 758

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK------- 338
              G      ++F  M   G  P+   + +L      AG   +A  +L  M+        
Sbjct: 759 GKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHL 818

Query: 339 YGVH--------------------------PNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
            G H                          P   ++  +I  +  A +++ A+ +++++ 
Sbjct: 819 QGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELV 878

Query: 373 EIGINPNLKT---YETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           E+  + N+ +   Y +L+     A Q   A  L   M  KG+ P
Sbjct: 879 EVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVP 922



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 101/434 (23%), Positives = 186/434 (42%), Gaps = 56/434 (12%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P ++TYT L+ A  + K+      +  ++      P+++ ++A+I+   ++G + +A
Sbjct: 517 GCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKA 576

Query: 84  MKIFQKM--------------KDSGC--KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            ++++K+               +  C   P   TY  LI G     K  ++ +LL  M  
Sbjct: 577 CEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLA 636

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
               +PN   Y+ L+  +C    I+ A  V  +M   G  P   TY +L     + G   
Sbjct: 637 -AGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLD 695

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++L EM N+   PN  T   ++ G  K G +E A+  L  M+E    PN+V + +LI
Sbjct: 696 LAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALI 755

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G      +D   K    M   G  P+ VT+  +++   +AGL+ +   + D+M      
Sbjct: 756 DGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWP 815

Query: 308 PDIHVFSILAKGYVRA-----GEPQKAES------------ILTSMRKYG-------VHP 343
             +  +    +G+ +      G  ++ ES            ++ S  K G       +H 
Sbjct: 816 KHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHK 875

Query: 344 NVV------------MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
            +V            M+ ++I   C A +++ A ++Y +M   GI P+L  + +L+ G  
Sbjct: 876 ELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLI 935

Query: 392 EAKQPWRAEELLQV 405
           E  + W  +E LQ+
Sbjct: 936 EVNK-W--DEALQL 946



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 102/453 (22%), Positives = 191/453 (42%), Gaps = 41/453 (9%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G+  T   Y  L   L  +   ++   L+ ++ +D  +    L N ++  C   G  DEA
Sbjct: 129 GYSHTGACYDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNVLVRRCCRHGLWDEA 188

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR-TYNILV 142
           ++   ++KD G +P+  TYN L++   + G+ E   ++ + MS        DR T     
Sbjct: 189 LEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCM--DRSTIGYFA 246

Query: 143 RAWC-------SKNSIE-------------------------EAWNVVYKMVASGIQPDA 170
           +A C       + N +E                         EA + +++M  +   P+ 
Sbjct: 247 QALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNV 306

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           VTY TL   + +  +    ++++  M      PN      +V GYC  G+   A +   R
Sbjct: 307 VTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNR 366

Query: 231 MKELEVHPNLVVFNSLIK---GFLDIKDSDGVDKALTLMEEFGVKPDV---VTFSTIMDA 284
           M      P  V +N  I    G  ++ +++ +D    + EE      V   V  +     
Sbjct: 367 MTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRC 426

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
               G   K  +I  +M++ G  PD   ++ +     +A + +K+  +   M++ GV+P+
Sbjct: 427 LCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPD 486

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
           V  +T +I  +C A  +++A S +++M  +G +PN+ TY  LL  Y ++KQ  +A ++  
Sbjct: 487 VYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFH 546

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
            M +    P   T   + D     G  ++A  V
Sbjct: 547 RMVDAACYPNAVTYSALIDGLCKAGEIQKACEV 579



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 152/303 (50%), Gaps = 20/303 (6%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK   A  +F  + + G+ P++ TYT+L+  + +  R    + ++S++  D   P+ + +
Sbjct: 657 GKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTY 716

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            AMI+  S+ G +++A+ +   M++ GC P   TY  LI G G  GK + SLKL + M+ 
Sbjct: 717 TAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNS 776

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            K   PN  TY +L+   C+   ++EA  ++ +M  +        Y+   + +++  +  
Sbjct: 777 -KGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSK--KFI 833

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV---VFN 244
            +  +L EM++++  P     G+++  + K G +E A+     + E+    N+    ++ 
Sbjct: 834 ASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYA 893

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTI------MDAWSSAGLM--GK 293
           SLI+    +  +  V++A TL  E    G+ PD++ F ++      ++ W  A  +  G+
Sbjct: 894 SLIQA---LCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYGR 950

Query: 294 CQE 296
           C E
Sbjct: 951 CHE 953


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 181/370 (48%), Gaps = 10/370 (2%)

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + P+ + FN +I A  +   VD A+++F+ M +  C P   TY TL+ G     + +E++
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            LL  M Q +   P+   YN+L+   C K  +     +V  M   G  P+ VTYNTL   
Sbjct: 243 LLLDEM-QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
               G+  +A  +L  M +++  PN+ T G +++G  K+    DA+R L  M+E   H N
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLN 361

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
             +++ LI G          ++A++L   M E G KP++V +S ++D     G   + +E
Sbjct: 362 QHIYSVLISGLF---KEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           I + M+ +G  P+ + +S L KG+ + G  ++A  +   M K G   N   ++ +I G C
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETL---LWGYGEAKQPWRAEELLQVMEEKGVRP 413
              +++ AM ++ KM  IGI P+   Y ++   L G G      +    +   EE   +P
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538

Query: 414 KKSTIQLVAD 423
              T  ++ D
Sbjct: 539 DVVTYNILLD 548



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 169/375 (45%), Gaps = 4/375 (1%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F  + E    P   TY TL+  L +++R    + L+ +++ +G  P  +++N +I+   
Sbjct: 209 VFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLC 268

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G++    K+   M   GC P   TYNTLI G    GK ++++ LL+ M   K + PND
Sbjct: 269 KKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI-PND 327

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY  L+     +    +A  ++  M   G   +   Y+ L     + G+   A  +  +
Sbjct: 328 VTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRK 387

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M     +PN     ++V G C+EG   +A   L RM      PN   ++SL+KGF     
Sbjct: 388 MAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGL 447

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            +   +    M++ G   +   +S ++D     G + +   ++  M+  GI+PD   +S 
Sbjct: 448 CEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSS 507

Query: 316 LAKGYVRAGEPQKAESILTSM---RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           + KG    G    A  +   M    +    P+VV +  ++ G C    + RA+ +   M 
Sbjct: 508 IIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSML 567

Query: 373 EIGINPNLKTYETLL 387
           + G +P++ T  T L
Sbjct: 568 DRGCDPDVITCNTFL 582



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 98/414 (23%), Positives = 190/414 (45%), Gaps = 10/414 (2%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
           T ++++ +      F S+  L+S++  +        F  +  A  ++   D+A+ +F +M
Sbjct: 79  TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138

Query: 91  KDS-GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM---SQDKNVKPNDRTYNILVRAWC 146
            D   CK +  ++N+++    N G     L+    +   + + N+ PN  ++N++++A C
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               ++ A  V   M      PD  TY TL     +      A  +L EMQ+    P+  
Sbjct: 199 KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
              +++ G CK+G++    + +  M      PN V +N+LI G L +K    +DKA++L+
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG-LCLKGK--LDKAVSLL 315

Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           E        P+ VT+ T+++             +   M + G   + H++S+L  G  + 
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKE 375

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+ ++A S+   M + G  PN+V+++ ++ G C   K   A  I  +M   G  PN  TY
Sbjct: 376 GKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTY 435

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
            +L+ G+ +      A ++ + M++ G    K    ++ D    +G  +EA  V
Sbjct: 436 SSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMV 489



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 160/348 (45%), Gaps = 39/348 (11%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L  + +  EA  + + +  EG  P+ + Y  L+  L ++     +  L+  +   G 
Sbjct: 229 MDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGC 288

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG------------ 108
            P+ + +N +I+     G +D+A+ + ++M  S C P   TY TLI G            
Sbjct: 289 VPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVR 348

Query: 109 ----------------YGNV-------GKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
                           Y  +       GK EE++ L + M++ K  KPN   Y++LV   
Sbjct: 349 LLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAE-KGCKPNIVVYSVLVDGL 407

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C +    EA  ++ +M+ASG  P+A TY++L + + + G    A Q+  EM       N+
Sbjct: 408 CREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNK 467

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA--- 262
               +++ G C  G +++AM    +M  + + P+ V ++S+IKG   I   D   K    
Sbjct: 468 FCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHE 527

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
           +   EE   +PDVVT++ ++D       + +  ++ + M+  G +PD+
Sbjct: 528 MLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDV 575



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 176/385 (45%), Gaps = 5/385 (1%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           DS L ++MI + + SG+ D   K+  +++         ++  + + YG    P++++ L 
Sbjct: 77  DSTL-SSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLF 135

Query: 123 QLMSQD----KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
             M  +    ++VK  +   N+++        +E    VV   +   I P+ +++N + +
Sbjct: 136 HRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIK 195

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           A  +     RA ++   M   +  P+  T   ++ G CKE  +++A+  L  M+     P
Sbjct: 196 ALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSP 255

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           + V++N LI G     D   V K +  M   G  P+ VT++T++      G + K   + 
Sbjct: 256 SPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL 315

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           + MV +   P+   +  L  G V+      A  +L+SM + G H N  +++ +ISG    
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKE 375

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            K + AMS++ KM E G  PN+  Y  L+ G     +P  A+E+L  M   G  P   T 
Sbjct: 376 GKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTY 435

Query: 419 QLVADSWRAIGLAREAKRVLKSAEE 443
             +   +   GL  EA +V K  ++
Sbjct: 436 SSLMKGFFKTGLCEEAVQVWKEMDK 460



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 138/286 (48%), Gaps = 4/286 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  KGK  +A  +   ++     P  +TY TL+  L +Q+R    + L+S +E+ G   +
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLN 361

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
             +++ +I+   + G  +EAM +++KM + GCKP    Y+ L+ G    GKP E+ ++L 
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 421

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M     + PN  TY+ L++ +      EEA  V  +M  +G   +   Y+ L       
Sbjct: 422 RMIASGCL-PNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGV 480

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM---KELEVHPNL 240
           G    A  +  +M    ++P+      I+ G C  G+M+ A++  + M   +E +  P++
Sbjct: 481 GRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDV 540

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
           V +N L+ G    KD       L  M + G  PDV+T +T ++  S
Sbjct: 541 VTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLS 586



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 141/275 (51%), Gaps = 6/275 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N LV + +  +A  + + + E G+      Y+ L++ L ++ + +  +SL  K+ + G 
Sbjct: 334 INGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGC 393

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP+ ++++ +++     G  +EA +I  +M  SGC P   TY++L+KG+   G  EE+++
Sbjct: 394 KPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQ 453

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M +      N   Y++L+   C    ++EA  V  KM+  GI+PD V Y+++ +  
Sbjct: 454 VWKEMDK-TGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGL 512

Query: 181 AQYGETYRAEQMLFEM---QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
              G    A ++  EM   +  + +P+  T  I++ G C + ++  A+  L  M +    
Sbjct: 513 CGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCD 572

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           P+++  N+ +    +   S+  DK  + +EE  V+
Sbjct: 573 PDVITCNTFLNTLSE--KSNSCDKGRSFLEELVVR 605


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 207/445 (46%), Gaps = 4/445 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +  L   G+  +AH +F+   E    P ++TY  +V         ++ + L+S++   G+
Sbjct: 260 LKALCTAGRIKDAHQLFD---EMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGL 316

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + + + + ++I    + G V +A+++ + M   G     + + T++ G+   G    +  
Sbjct: 317 ELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARN 376

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M Q + +  +  TY  L+   C    ++EA  V+ +M   G+  DAVTY  L   Y
Sbjct: 377 WFDEM-QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY 435

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A  +  +M   +V PN  T   +  G CK+G++  A   L+ M    +  N+
Sbjct: 436 CKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNI 495

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +NSLI G     + +   + +  M+E G+KPDV T++TI+ A   +  + +   +  +
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQE 555

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  GI+P I  +++L  G+  +G  +  + +L  M +  +HPN   + +++  +C    
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+    IY+ M    + PN  TY  L+ G+ +A+    A      M EKG R   S+   
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNA 675

Query: 421 VADSWRAIGLAREAKRVLKSAEEDR 445
           +           EA+R+ +   +DR
Sbjct: 676 LIRLLNKKKKFTEARRLFEKMRKDR 700



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 201/389 (51%), Gaps = 12/389 (3%)

Query: 51  LISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG 110
           L+ ++ + G+ P     NA++  C     +DEA+++FQ++ +      T +YN L+K   
Sbjct: 213 LLLRLRQYGISPSPESCNAVL--CRLP--LDEAVQLFQELPEKN----TCSYNILLKALC 264

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
             G+ +++ +L   M+      P+  TY I+V  +C+ + +E A  ++ +M A G++ + 
Sbjct: 265 TAGRIKDAHQLFDEMAS----PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNP 320

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           V Y ++       G+   A +++ +M  + V  +      ++SG+C++G++  A  +   
Sbjct: 321 VAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDE 380

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
           M++  +  + V + +LI G     +    ++ L  ME+ G+  D VT++ ++D +   G 
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           M +   + + MV+  + P++  ++ L+ G  + G+   A  +L  M   G+  N+  + +
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I+G C A  +++AM     M E G+ P++ TY T++    ++K+  RA  LLQ M +KG
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           ++P   T  ++ + +   G     KR+L+
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 120/248 (48%), Gaps = 18/248 (7%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E G +P + TYTT++ AL + K      SL+ ++   G+KP  + +N ++N    SG V+
Sbjct: 523 EAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
              ++ + M +    P T+TYN+L+K Y    N+    E  K   ++SQ+  V PN+ TY
Sbjct: 583 GGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYK--GMLSQE--VVPNENTY 638

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           NIL++  C   +++EA     +M+  G +  A +YN L R   +  +   A ++  +M+ 
Sbjct: 639 NILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRK 698

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
           +++          +     E N+E  +     + E+          +L+K   D  D D 
Sbjct: 699 DRLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEV----------TLVKSIAD-TDDDF 747

Query: 259 VDKALTLM 266
            ++ +++M
Sbjct: 748 AEEHISIM 755



 Score = 38.9 bits (89), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 20/79 (25%), Positives = 40/79 (50%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA Y  + +IE+G R T  +Y  L+  L ++K+F     L  K+ KD +  +  ++N  I
Sbjct: 653 EALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYI 712

Query: 72  NACSESGNVDEAMKIFQKM 90
           +      N++  + +  ++
Sbjct: 713 DLSFNEDNLESTLALCDEL 731


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 190/395 (48%), Gaps = 1/395 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G R  L T+  ++       +    LS++ K+ K G +PD +   +++N       V +A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +  KM + G KP    YN +I       +  ++    + + + K ++PN  TY  LV 
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER-KGIRPNVVTYTALVN 233

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C+ +   +A  ++  M+   I P+ +TY+ L  A+ + G+   A+++  EM    + P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   +V+G C    +++A +    M       ++V +N+LI GF   K  +   K  
Sbjct: 294 DIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M + G+  + VT++T++  +  AG + K QE F  M   GI PDI  ++IL  G    
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           GE +KA  I   M+K  +  ++V +TTVI G C   K++ A S++  +   G+ P++ TY
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            T++ G          E L   M+++G+     T+
Sbjct: 474 TTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/427 (22%), Positives = 212/427 (49%), Gaps = 1/427 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K ++A  +F+ +++    P+++ +  L++A+ + K++  ++SL  K+E  G++ D   FN
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +IN       V  A+ I  KM   G +P   T  +L+ G+    +  +++ L+  M + 
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE- 183

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
              KP+   YN ++ + C    + +A++   ++   GI+P+ VTY  L            
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A ++L +M   ++ PN  T   ++  + K G + +A      M  + + P++V ++SL+ 
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVN 303

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G       D  ++   LM   G   DVV+++T+++ +  A  +    ++F +M + G+  
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           +   ++ L +G+ +AG+  KA+   + M  +G+ P++  +  ++ G C+  ++++A+ I+
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           E M +  ++ ++ TY T++ G  +  +   A  L   +  KG++P   T   +       
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483

Query: 429 GLAREAK 435
           GL  E +
Sbjct: 484 GLLHEVE 490



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 180/373 (48%), Gaps = 36/373 (9%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           + +  +A  + + ++E G++P ++ Y  ++ +L + KR         ++E+ G++P+ + 
Sbjct: 168 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 227

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           + A++N    S    +A ++   M      P   TY+ L+  +   GK  E+ +L + M 
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +  ++ P+  TY+ LV   C  + I+EA  +   MV+ G   D V+YNTL          
Sbjct: 288 R-MSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL---------- 336

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
                                    ++G+CK   +ED M+    M +  +  N V +N+L
Sbjct: 337 -------------------------INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I+GF    D D   +  + M+ FG+ PD+ T++ ++      G + K   IF+DM K  +
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           + DI  ++ + +G  + G+ ++A S+  S+   G+ P++V +TT++SG C    +    +
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEA 491

Query: 367 IYEKMCEIGINPN 379
           +Y KM + G+  N
Sbjct: 492 LYTKMKQEGLMKN 504



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 179/372 (48%), Gaps = 7/372 (1%)

Query: 41  RQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS 100
           R  +    + L S + K    P  + FN +++A  +    D  + + +KM+  G +    
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
           T+N +I  +    +   +L +L  M +    +P+  T   LV  +C +N + +A ++V K
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLK-LGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           MV  G +PD V YN +  +  +      A     E++   +RPN  T   +V+G C    
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE---FGVKPDVVT 277
             DA R L  M + ++ PN++ +++L+  F+    +  V +A  L EE     + PD+VT
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFV---KNGKVLEAKELFEEMVRMSIDPDIVT 297

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           +S++++       + +  ++FD MV  G   D+  ++ L  G+ +A   +    +   M 
Sbjct: 298 YSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
           + G+  N V + T+I G+  A  + +A   + +M   GI+P++ TY  LL G  +  +  
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417

Query: 398 RAEELLQVMEEK 409
           +A  + + M+++
Sbjct: 418 KALVIFEDMQKR 429



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 154/333 (46%), Gaps = 16/333 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L    +  +A  + + +I++   P +ITY+ L+ A  +  +      L  ++ +  +
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + +++++N       +DEA ++F  M   GC     +YNTLI G+    + E+ +K
Sbjct: 292 DPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + MSQ + +  N  TYN L++ +     +++A     +M   GI PD  TYN L    
Sbjct: 352 LFREMSQ-RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              GE  +A  +  +MQ  ++  +  T   ++ G CK G +E+A      +    + P++
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V + +++ G         V+   T M++ G+  +        D   S G +    E+   
Sbjct: 471 VTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN--------DCTLSDGDITLSAELIKK 522

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           M+  G  P     S+L    +++G  +KA S+L
Sbjct: 523 MLSCGYAP-----SLLKD--IKSGVCKKALSLL 548


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 206/408 (50%), Gaps = 2/408 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE-KDGMKPDSI 65
           +GK   A  +   ++E+G  P  I YT L+  L  + + K+   +  ++  K+G+  D I
Sbjct: 573 RGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCI 632

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            +N+M+N   + G ++E  ++ + M ++   P++++YN L+ GY   G+   +L L + M
Sbjct: 633 AYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDM 692

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
            ++  +KP++ TY +L+   C    IE A   + KMV  G+ PD + ++ L +A+++  +
Sbjct: 693 VKE-GIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSK 751

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A Q+   M+   + P+ +T   +V+G  ++  ++ +   L+ M E  + P    + +
Sbjct: 752 MSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIA 811

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           LI     + D DG  +    M+  GV P  V  S+I+      G + +   +F  +++AG
Sbjct: 812 LINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAG 871

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + P I  F+ L  G  +  +   A  +   M   G+  +VV +  +I+G CN   +  A+
Sbjct: 872 MVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDAL 931

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            +YE+M   G+ PN+ TY TL             E+LL+ +E++G+ P
Sbjct: 932 DLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVP 979



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 217/460 (47%), Gaps = 6/460 (1%)

Query: 3   ILVG---KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG 59
           +LVG    G   EA  +   ++     P   TYT L+    ++ +    L L+  + + G
Sbjct: 531 LLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKG 590

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMK-DSGCKPTTSTYNTLIKGYGNVGKPEES 118
           + PD+I +  ++N     G V  A  +FQ++    G       YN+++ GY   G+  E 
Sbjct: 591 LVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEI 650

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
            +L++ M +++ V P+  +YNIL+  +  K  +     +   MV  GI+PD VTY  L  
Sbjct: 651 ERLMRNMHENE-VYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIF 709

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
              +YG    A + L +M    V P+     I++  + ++  M +A++    MK L + P
Sbjct: 710 GLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSP 769

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           +   + +++ G +         + L  M E G++P    +  +++A    G +    E+ 
Sbjct: 770 SSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELK 829

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           +DM   G+ P     S + +G  + G+ ++A  + +S+ + G+ P +  FTT++ G C  
Sbjct: 830 EDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKE 889

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            K+  A  + + M   G+  ++ TY  L+ G    K    A +L + M+ KG+ P  +T 
Sbjct: 890 FKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTY 949

Query: 419 QLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVE 458
             +  +  A G  ++ +++LK   EDR  +P+ K   ++E
Sbjct: 950 ITLTGAMYATGTMQDGEKLLKDI-EDRGIVPSYKHPESLE 988



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/421 (23%), Positives = 201/421 (47%), Gaps = 21/421 (4%)

Query: 6   GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
           G+GK + A YIFN ++ +  +P++ TYT L+    R  R      ++ +++  G++P   
Sbjct: 346 GEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPRE- 404

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
                         V +A +I + M   G  P   TY+ LI    N G   E+ +  Q M
Sbjct: 405 --------------VSKAKQILKCMLADGIDPDVITYSALI----NEGMIAEAEQFKQYM 446

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           S+ K +  +  ++N ++ ++C + ++ EA++V   MV  G  PD  TY +L R   Q G 
Sbjct: 447 SRMK-ISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGH 505

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
             +A++ +  +       +E+T   ++ G CK G +++A+    +M    + P+   +  
Sbjct: 506 LVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTI 565

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV-KA 304
           L+ GF            L +M E G+ PD + ++ +++   + G +     +F +++ K 
Sbjct: 566 LLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKE 625

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G+  D   ++ +  GY++ G+  + E ++ +M +  V+P+   +  ++ G+    ++ R 
Sbjct: 626 GLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRT 685

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           + +Y  M + GI P+  TY  L++G  E      A + L+ M  +GV P      ++  +
Sbjct: 686 LYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKA 745

Query: 425 W 425
           +
Sbjct: 746 F 746



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 217/466 (46%), Gaps = 29/466 (6%)

Query: 9   KPHE---AHYIFNCLIEEGHRPTLITYTTLV--AALTRQKRFKSILSLISKVEKDGMKPD 63
           +P E   A  I  C++ +G  P +ITY+ L+    +   ++FK  +S +       +  D
Sbjct: 401 RPREVSKAKQILKCMLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMK------ISFD 454

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              FN +I++  + GNV EA  ++  M   G  P   TY +L++G    G   ++ + + 
Sbjct: 455 VASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMV 514

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            +  +K    +++T N L+   C   +++EA ++  KMV   I PD  TY  L   + + 
Sbjct: 515 YL-LEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKR 573

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL----EVHPN 239
           G+   A  +L  M    + P+      +++G   EG ++ A    Y  +E+     ++ +
Sbjct: 574 GKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAAS---YMFQEIICKEGLYAD 630

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            + +NS++ G+L     + +++ +  M E  V P   +++ +M  +   G + +   ++ 
Sbjct: 631 CIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYR 690

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           DMVK GI+PD   + +L  G    G  + A   L  M   GV P+ + F  +I  +    
Sbjct: 691 DMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKS 750

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST-I 418
           KM  A+ ++  M  + ++P+ KTY  ++ G        ++ E+L  M E G++PK +  I
Sbjct: 751 KMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYI 810

Query: 419 QLVADSWRA--IGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHR 462
            L+    R   I  A E K       ED +++     E+A  SI R
Sbjct: 811 ALINAKCRVGDIDGAFELK-------EDMKALGVVPSEVAESSIVR 849



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/450 (23%), Positives = 206/450 (45%), Gaps = 35/450 (7%)

Query: 1   MNILVGKGKPHEAHYIF----NCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
           +N L  +GK  +A  +     NC +     P  +TY T++    ++ R KS L ++  +E
Sbjct: 237 LNSLCTQGKLSKAESMLQKMKNCRL-----PNAVTYNTILNWYVKKGRCKSALRILDDME 291

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           K+G++ D   +N MI+   +      A  + ++M++    P   +YNTLI G+   GK  
Sbjct: 292 KNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKIN 351

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK---------------- 160
            ++ +   M + +++KP+  TY  L+  +C     +EA  V+Y+                
Sbjct: 352 LAIYIFNQMLR-QSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQ 410

Query: 161 ----MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
               M+A GI PD +TY+ L       G    AEQ    M   ++  +  +   I+  YC
Sbjct: 411 ILKCMLADGIDPDVITYSALINE----GMIAEAEQFKQYMSRMKISFDVASFNCIIDSYC 466

Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
           + GN+ +A      M      P++  + SL++G           + +  + E     D  
Sbjct: 467 QRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEK 526

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T +T++      G + +  ++ + MV   I PD + ++IL  G+ + G+   A  +L  M
Sbjct: 527 TLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMM 586

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY-EKMCEIGINPNLKTYETLLWGYGEAKQ 395
            + G+ P+ + +T +++G  N  +++ A  ++ E +C+ G+  +   Y +++ GY +  Q
Sbjct: 587 LEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQ 646

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
               E L++ M E  V P  ++  ++   +
Sbjct: 647 INEIERLMRNMHENEVYPSSASYNILMHGY 676



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 160/344 (46%), Gaps = 1/344 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN  +  G+ +E   +   + E    P+  +Y  L+    ++ +    L L   + K+G+
Sbjct: 638 MNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGI 697

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD++ +  +I    E G ++ A+K  +KM   G  P    ++ LIK +    K   +L+
Sbjct: 698 KPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQ 757

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M    ++ P+ +TY  +V     KN +++++ +++ MV SG+QP    Y  L  A 
Sbjct: 758 LFSYMKW-LHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAK 816

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A ++  +M+   V P+E     IV G CK G +E+A+     +    + P +
Sbjct: 817 CRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTI 876

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             F +L+ G       D       LME  G+K DVVT++ ++    +   +    +++++
Sbjct: 877 ATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEE 936

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           M   G+ P+I  +  L       G  Q  E +L  +   G+ P+
Sbjct: 937 MKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 980



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/378 (22%), Positives = 154/378 (40%), Gaps = 54/378 (14%)

Query: 93  SGCKPTT-STYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
           S C PT   + + L+  Y   GK  ++   +  M +    K +  + N ++ A    N  
Sbjct: 153 SRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDE-CGFKASLFSCNNILNALVGINKS 211

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           E  W  + + +      D  T N +  +    G+  +AE ML +M+N ++ PN  T   I
Sbjct: 212 EYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTI 270

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           ++ Y K+G  + A+R L  M++  +  +L  +N +I     +K S      L  M E  +
Sbjct: 271 LNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNL 330

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG------- 324
            PD  +++T++  +   G +     IF+ M++  ++P +  ++ L  GY R G       
Sbjct: 331 TPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARR 390

Query: 325 -------------EPQKAESILTSMRKYGVHPNVVM------------------------ 347
                        E  KA+ IL  M   G+ P+V+                         
Sbjct: 391 VLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMK 450

Query: 348 -------FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
                  F  +I  +C    +  A S+Y+ M   G  P++ TY +LL G  +     +A+
Sbjct: 451 ISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAK 510

Query: 401 ELLQVMEEKGVRPKKSTI 418
           E +  + EK     + T+
Sbjct: 511 EFMVYLLEKACAIDEKTL 528


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 190/389 (48%), Gaps = 8/389 (2%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+ HEA  + + ++        +    L+  L R  +     +++SK+      P+
Sbjct: 280 LCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN----PN 335

Query: 64  SILFNAMINACSESGNVDEAMKIFQK-MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           ++L+N +IN    SG  +EA  +  K M  +G +P   T+N +I G    G    +L+ L
Sbjct: 336 TVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFL 395

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             M + K  +PN  TY IL+  +C +   EEA  VV  M A G+  + V YN L  A  +
Sbjct: 396 DEMVK-KGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCK 454

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE-VHPNLV 241
            G+   A QM  EM +   +P+  T   ++ G CK   ME+A+  LYR   LE V  N V
Sbjct: 455 DGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALG-LYRDMLLEGVIANTV 513

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            +N+LI  FL ++     DK +  M   G   D +T++ ++ A    G   KC  + + M
Sbjct: 514 TYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQM 573

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
               I P I+  +IL   + R G+   A   L  M + G+ P++V + ++I+G C   + 
Sbjct: 574 FGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRF 633

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           Q A++++  +   GI+P+  TY TL+  Y
Sbjct: 634 QEALNLFNGLQAKGIHPDAVTYNTLISRY 662



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/507 (24%), Positives = 221/507 (43%), Gaps = 72/507 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + ILV    P  A  +F  ++  G  PT+ T+  ++ A        S  SL+  + K G 
Sbjct: 172 LEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGC 231

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+SI++  +I+A SE+  V+EAMK+ ++M   GC+P   T+N +I G    G+  E+ K
Sbjct: 232 VPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAK 291

Query: 121 -----LLQLMSQDKNVK-------------------------PNDRTYNILVRAWCSKNS 150
                LL+  + D  ++                         PN   YN L+  +     
Sbjct: 292 LHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGR 351

Query: 151 IEEAWNVVYK-MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            EEA +++YK MV +G +PDA T+N +     + G    A + L EM      PN  T  
Sbjct: 352 FEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYT 411

Query: 210 IIVSGYCKEGNME-----------------------------------DAMRFLYRMKEL 234
           I++ G+CK+G+ E                                   DA++    M   
Sbjct: 412 ILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSK 471

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLM 291
              P++  FNSLI G   +  +D +++AL L  +    GV  + VT++T++ A+    L+
Sbjct: 472 GCKPDIYTFNSLIYG---LCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELI 528

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
            +  ++  +M   G   D   ++ L K   + G  +K   ++  M    + P++     +
Sbjct: 529 QQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNIL 588

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I+ +C   K+  A+     M + G+ P++ TY +L+ G  +  +   A  L   ++ KG+
Sbjct: 589 INSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGI 648

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVL 438
            P   T   +   +   GL  +A ++L
Sbjct: 649 HPDAVTYNTLISRYCYEGLFNDACQLL 675



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 171/331 (51%), Gaps = 3/331 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  KG    A    + ++++G  P +ITYT L+    +Q  F+    +++ +   G+  +
Sbjct: 382 LCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLN 441

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ +N +I A  + G + +A++++ +M   GCKP   T+N+LI G     K EE+L L +
Sbjct: 442 TVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYR 501

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  +  V  N  TYN L+ A+     I++A  +V +M   G   D +TYN L +A  + 
Sbjct: 502 DMLLE-GVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKT 560

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G T +   ++ +M   ++ P+  +C I+++ +C+ G + DA++FL  M +  + P++V +
Sbjct: 561 GATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTY 620

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK-CQEIFDDMV 302
           NSLI G   +            ++  G+ PD VT++T++  +   GL    CQ +F   V
Sbjct: 621 NSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKG-V 679

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
             G  P+   +SIL   +V+     +  +IL
Sbjct: 680 SNGFIPNEITWSILINYFVKNNSDSEQFTIL 710



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 106/454 (23%), Positives = 199/454 (43%), Gaps = 71/454 (15%)

Query: 56  EKDGMKPDSI----LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGN 111
           EK G++   I    ++  +I+     G      K+ ++MKD GC    S +  +++ YG 
Sbjct: 82  EKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGK 141

Query: 112 VGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAV 171
            G P ++ +LL  M      +P  ++YN+++    + N  + A NV Y M++ GI P   
Sbjct: 142 AGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVY 201

Query: 172 TYNTLARAYAQYGETYRAEQMLFEM--------------------QNNQV---------- 201
           T+  + +A+    E   A  +L +M                    +NN+V          
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM 261

Query: 202 -----RPNERTCGIIVSGYCKEGNMEDA----------------------MRFLYRMKEL 234
                 P+ +T   ++ G CK G + +A                      M  L RM ++
Sbjct: 262 FLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKV 321

Query: 235 E---------VHPNLVVFNSLIKGF-LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
           +          +PN V++N+LI G+ +  +  +  D     M   G +PD  TF+ ++D 
Sbjct: 322 DEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDG 381

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
               G +    E  D+MVK G EP++  ++IL  G+ + G  ++A  ++ SM   G+  N
Sbjct: 382 LCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLN 441

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
            V +  +I   C   K+Q A+ +Y +M   G  P++ T+ +L++G  +  +   A  L +
Sbjct: 442 TVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYR 501

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            M  +GV     T   +  ++  + L ++A +++
Sbjct: 502 DMLLEGVIANTVTYNTLIHAFLRLELIQQADKLV 535



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 134/273 (49%), Gaps = 7/273 (2%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           N L+G     GK  +A  ++  +  +G +P + T+ +L+  L +  + +  L L   +  
Sbjct: 446 NCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLL 505

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
           +G+  +++ +N +I+A      + +A K+  +M+  GC     TYN LIK     G  E+
Sbjct: 506 EGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEK 565

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
            L L++ M  ++ + P+  + NIL+ ++C    + +A   +  M+  G+ PD VTYN+L 
Sbjct: 566 CLGLIEQMFGEE-IFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLI 624

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               + G    A  +   +Q   + P+  T   ++S YC EG   DA + L++       
Sbjct: 625 NGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFI 684

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           PN + ++ LI  F  +K++   ++   LM  +G
Sbjct: 685 PNEITWSILINYF--VKNNSDSEQFTILMGNWG 715



 Score = 38.9 bits (89), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 36/72 (50%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EA  +FN L  +G  P  +TY TL++    +  F     L+ K   +G 
Sbjct: 624 INGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGF 683

Query: 61  KPDSILFNAMIN 72
            P+ I ++ +IN
Sbjct: 684 IPNEITWSILIN 695


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 218/442 (49%), Gaps = 7/442 (1%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           ++A  ++  +IE G  PT+IT+ T++ +  +    + +  +  ++++  ++   + +N +
Sbjct: 220 NKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 279

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           IN  S++G ++EA +    M+ SG   T  ++N LI+GY   G  +++  +   M  +  
Sbjct: 280 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEM-LNAG 338

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           + P   TYNI + A C    I++A  ++  M A    PD V+YNTL   Y + G+   A 
Sbjct: 339 IYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEAS 394

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            +  +++   + P+  T   ++ G C+ GN+E A R    M    + P+++ + +L+KGF
Sbjct: 395 LLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGF 454

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE-PD 309
           +   +     +    M   G+KPD   ++T        G   K   + ++MV      PD
Sbjct: 455 VKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPD 514

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
           + ++++   G  + G   KA      + + G+ P+ V +TTVI G+    + + A ++Y+
Sbjct: 515 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYD 574

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
           +M    + P++ TY  L++G+ +A +  +A +    M+++GVRP   T   +       G
Sbjct: 575 EMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAG 634

Query: 430 LAREAKRVLKSAEEDRQSMPNK 451
              EA R L   EE+    PNK
Sbjct: 635 NIDEAYRYLCKMEEEGIP-PNK 655



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 196/399 (49%), Gaps = 8/399 (2%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           F  +I +G  P++     ++  L   +      ++   + + G+ P  I FN M+++C +
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK-NVKPND 135
           +G+++   KI+ +MK    + +  TYN LI G+   GK EE+ +    M +    V P  
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTP-- 308

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            ++N L+  +C +   ++AW V  +M+ +GI P   TYN    A   +G    A ++L  
Sbjct: 309 YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSS 368

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M      P+  +   ++ GY K G   +A      ++  ++HP++V +N+LI G  +  +
Sbjct: 369 M----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGN 424

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            +G  +    M    + PDV+T++T++  +   G +    E++D+M++ GI+PD + ++ 
Sbjct: 425 LEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT 484

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVH-PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
            A G +R G+  KA  +   M     H P++ ++   I G C    + +A+    K+  +
Sbjct: 485 RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV 544

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G+ P+  TY T++ GY E  Q   A  L   M  K + P
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYP 583



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 193/425 (45%), Gaps = 18/425 (4%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NIL+      GK  EA      +   G   T  ++  L+    +Q  F     +  ++  
Sbjct: 277 NILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLN 336

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK-PE 116
            G+ P +  +N  I A  + G +D+A ++   M      P   +YNTL+ GY  +GK  E
Sbjct: 337 AGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVE 392

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
            SL    L + D  + P+  TYN L+   C   ++E A  +  +M    I PD +TY TL
Sbjct: 393 ASLLFDDLRAGD--IHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTL 450

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
            + + + G    A ++  EM    ++P+         G  + G+ + A R    M   + 
Sbjct: 451 VKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDH 510

Query: 237 H-PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMG 292
           H P+L ++N  I G   + +   + KA+    +    G+ PD VT++T++  +   G   
Sbjct: 511 HAPDLTIYNVRIDGLCKVGN---LVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFK 567

Query: 293 KCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
             + ++D+M++  + P +  + +L  G+ +AG  ++A    T M+K GV PNV+    ++
Sbjct: 568 MARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALL 627

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
            G C A  +  A     KM E GI PN  +Y  L+    + ++     +L + M +K + 
Sbjct: 628 YGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIE 687

Query: 413 PKKST 417
           P   T
Sbjct: 688 PDGYT 692



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 184/389 (47%), Gaps = 13/389 (3%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G  PT  TY   + AL    R      L+S +      PD + +N +++   + G 
Sbjct: 334 MLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGK 389

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             EA  +F  ++     P+  TYNTLI G    G  E + +L + M+  + + P+  TY 
Sbjct: 390 FVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTT-QLIFPDVITYT 448

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM-QN 198
            LV+ +    ++  A  V  +M+  GI+PD   Y T A    + G++ +A ++  EM   
Sbjct: 449 TLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVAT 508

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
           +   P+     + + G CK GN+  A+ F  ++  + + P+ V + ++I+G+L+   +  
Sbjct: 509 DHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLE---NGQ 565

Query: 259 VDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
              A  L +E   K   P V+T+  ++   + AG + +  +   +M K G+ P++   + 
Sbjct: 566 FKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNA 625

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  G  +AG   +A   L  M + G+ PN   +T +IS  C+  K +  + +Y++M +  
Sbjct: 626 LLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKE 685

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQ 404
           I P+  T+   L+ + E     R  E L+
Sbjct: 686 IEPDGYTHRA-LFKHLEKDHESREVEFLE 713



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 156/332 (46%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+  +  GK  EA  +F+ L      P+++TY TL+  L      +    L  ++    +
Sbjct: 381 MHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI 440

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD I +  ++    ++GN+  A +++ +M   G KP    Y T   G   +G  +++ +
Sbjct: 441 FPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFR 500

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + M    +  P+   YN+ +   C   ++ +A     K+   G+ PD VTY T+ R Y
Sbjct: 501 LHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGY 560

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A  +  EM   ++ P+  T  +++ G+ K G +E A ++   MK+  V PN+
Sbjct: 561 LENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNV 620

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           +  N+L+ G     + D   + L  MEE G+ P+  +++ ++          +  +++ +
Sbjct: 621 MTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKE 680

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           M+   IEPD +    L K   +  E ++ E +
Sbjct: 681 MLDKEIEPDGYTHRALFKHLEKDHESREVEFL 712



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 85/412 (20%), Positives = 161/412 (39%), Gaps = 87/412 (21%)

Query: 114 KPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ--PDAV 171
           KPE + +    + +  +VK + + +  ++      + + EA+ V  + +  G+    D +
Sbjct: 98  KPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHEIDDLL 157

Query: 172 TYNTLARAYAQ---------YGETYRAEQMLF---EMQNNQVRPNERTCGIIVSGYCKEG 219
              +  +  A          Y +   AE+ L    +M      P+ R C I++       
Sbjct: 158 IDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSR 217

Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
            M  A      M E  + P ++ FN+++       D + VDK    M+   ++   VT++
Sbjct: 218 MMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYN 277

Query: 280 TIMDAWSSAGLM---------------------------GKC-QEIFDD-------MVKA 304
            +++ +S  G M                           G C Q +FDD       M+ A
Sbjct: 278 ILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNA 337

Query: 305 GIEP-------------------------------DIHVFSILAKGYVRAGEPQKAESIL 333
           GI P                               D+  ++ L  GY++ G+  +A  + 
Sbjct: 338 GIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLF 397

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             +R   +HP++V + T+I G C +  ++ A  + E+M    I P++ TY TL+ G+ + 
Sbjct: 398 DDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKN 457

Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR--EAKRVLKSAEE 443
                A E+   M  KG++P        A + RA+G  R  ++ +  +  EE
Sbjct: 458 GNLSMATEVYDEMLRKGIKPDG-----YAYTTRAVGELRLGDSDKAFRLHEE 504


>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
          Length = 642

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 206/425 (48%), Gaps = 5/425 (1%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGH-RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK 61
           +L+ +G+  + H ++  +  EG   P  ITY+ L+++  +  R  S + L  +++ + M+
Sbjct: 206 MLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQ 265

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P   ++  ++    + G V++A+ +F++MK +GC PT  TY  LIKG G  G+ +E+   
Sbjct: 266 PTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGF 325

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA-Y 180
            + M +D  + P+    N L+        +EE  NV  +M      P  V+YNT+ +A +
Sbjct: 326 YKDMLRD-GLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALF 384

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                         +M+ + V P+E T  I++ GYCK   +E A+  L  M E    P  
Sbjct: 385 ESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCP 444

Query: 241 VVFNSLIKGFLDIKDSDGVDKALT-LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
             + SLI      K  +  D+    L E FG     V ++ ++  +   G + +  ++F+
Sbjct: 445 AAYCSLINALGKAKRYEAADELFKELKENFGNVSSRV-YAVMIKHFGKCGKLSEAVDLFN 503

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           +M   G  PD++ ++ L  G V+AG   +A S+L  M + G   ++     +++G+    
Sbjct: 504 EMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTG 563

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
             +RA+ ++E +   GI P+  TY TLL  +  A     A  +++ M++KG      T  
Sbjct: 564 VPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYS 623

Query: 420 LVADS 424
            + D+
Sbjct: 624 SILDA 628



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/423 (23%), Positives = 203/423 (47%), Gaps = 9/423 (2%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDG-MKPDSILFNAMINACSESGNVDEAM 84
           +PT  TY +++  L ++ + + +  + +++  +G   PD+I ++A+I++  + G  D A+
Sbjct: 194 KPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAI 253

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
           ++F +MKD+  +PT   Y TL+  Y  VGK E++L L + M +     P   TY  L++ 
Sbjct: 254 RLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKR-AGCSPTVYTYTELIKG 312

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
                 ++EA+     M+  G+ PD V  N L     + G       +  EM   +  P 
Sbjct: 313 LGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPT 372

Query: 205 ERTCGIIVSG-YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
             +   ++   +  + ++ +   +  +MK   V P+   ++ LI G+     ++ V+KAL
Sbjct: 373 VVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCK---TNRVEKAL 429

Query: 264 TLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
            L+EE    G  P    + ++++A   A       E+F ++ +        V++++ K +
Sbjct: 430 LLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHF 489

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            + G+  +A  +   M+  G  P+V  +  ++SG   A  +  A S+  KM E G   ++
Sbjct: 490 GKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADI 549

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            ++  +L G+     P RA E+ + ++  G++P   T   +   +   G+  EA R+++ 
Sbjct: 550 NSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMRE 609

Query: 441 AEE 443
            ++
Sbjct: 610 MKD 612



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 92/416 (22%), Positives = 188/416 (45%), Gaps = 2/416 (0%)

Query: 31  TYTTLVAALTRQKRFKSILSLISKVEKDG-MKPDSILFNAMINACSESGNVDEAMKIFQK 89
           TY TL+  L   + +  +   I +V ++  +     + + ++ A   +  V +A+ +F +
Sbjct: 128 TYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQ 187

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
            K   CKPT+STYN++I      G+ E+  ++   M  + +  P+  TY+ L+ ++    
Sbjct: 188 AKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLG 247

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
             + A  +  +M  + +QP    Y TL   Y + G+  +A  +  EM+     P   T  
Sbjct: 248 RNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYT 307

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            ++ G  K G +++A  F   M    + P++V  N+L+     +   + +    + M  +
Sbjct: 308 ELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMW 367

Query: 270 GVKPDVVTFSTIMDA-WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
              P VV+++T++ A + S   + +    FD M    + P    +SIL  GY +    +K
Sbjct: 368 RCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEK 427

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  +L  M + G  P    + ++I+    A + + A  +++++ E   N + + Y  ++ 
Sbjct: 428 ALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIK 487

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
            +G+  +   A +L   M+ +G  P       +       G+  EA  +L+  EE+
Sbjct: 488 HFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEEN 543



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 148/319 (46%), Gaps = 8/319 (2%)

Query: 100 STYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVY 159
           STY TLI+         E  + +Q + ++  V  +    + LV+A      + +A +V Y
Sbjct: 127 STYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFY 186

Query: 160 KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN-NQVRPNERTCGIIVSGYCKE 218
           +      +P + TYN++     Q G+  +  ++  EM N     P+  T   ++S Y K 
Sbjct: 187 QAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKL 246

Query: 219 GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDV 275
           G  + A+R    MK+  + P   ++ +L+  +  +     V+KAL L EE    G  P V
Sbjct: 247 GRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGK---VEKALDLFEEMKRAGCSPTV 303

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
            T++ ++     AG + +    + DM++ G+ PD+   + L     + G  ++  ++ + 
Sbjct: 304 YTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSE 363

Query: 336 MRKYGVHPNVVMFTTVISGWCNA-VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
           M  +   P VV + TVI     +   +    S ++KM    ++P+  TY  L+ GY +  
Sbjct: 364 MGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTN 423

Query: 395 QPWRAEELLQVMEEKGVRP 413
           +  +A  LL+ M+EKG  P
Sbjct: 424 RVEKALLLLEEMDEKGFPP 442



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/112 (23%), Positives = 59/112 (52%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ +V  G  +EA+ +   + E G R  + ++  ++    R    +  + +   ++  G+
Sbjct: 521 MSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGI 580

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNV 112
           KPD + +N ++   + +G  +EA ++ ++MKD G +    TY++++   GNV
Sbjct: 581 KPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNV 632


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 194/423 (45%), Gaps = 18/423 (4%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F+ ++  G  P+++TY TL+ A   Q        +  ++    + P+ I + +MI    
Sbjct: 165 LFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLC 224

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           E G + +A ++F  MK++G +P   TYN L+ G+        +  L Q +  +  + PN 
Sbjct: 225 EEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQEL-LNSGLIPNA 283

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
             +  L+  +C      EA ++   M   G+ P    YN+L     + G+   A  +  E
Sbjct: 284 VVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQE 343

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M    + P+E TC I+V G C  G ++ A RFL  ++E  V+ N   +N+LI  +    +
Sbjct: 344 MTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGN 403

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
            +      T M E GV+P+VV++S+++D  S  G M     I+ +MV  GIEP++  ++ 
Sbjct: 404 LEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTA 463

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM---------- 365
           L  G+ + G    A      M + G+ PN +  + ++ G C   ++Q A+          
Sbjct: 464 LIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIK 523

Query: 366 -----SIYEKMC--EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
                S +      E  + PN   Y TL++G     Q + A +L   M + G+     T 
Sbjct: 524 YSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTY 583

Query: 419 QLV 421
            L+
Sbjct: 584 TLL 586



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 183/404 (45%), Gaps = 44/404 (10%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
              ++ A S+ G +DEA+ +F+++      P     N ++ G     +   + +L   M 
Sbjct: 114 LGVLVIALSQMGLLDEALYVFRRLWT---LPALPACNAVLDGLVKARRSRCAWELFDEML 170

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + + + P+  TYN L+ A   + ++ +A  +  +MVA  I P+ +TY ++     + G  
Sbjct: 171 R-RGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCI 229

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             AE++   M+   +RPN+ T  +++SG+C+  ++  A      +    + PN VVF +L
Sbjct: 230 GDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTL 289

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I GF   K           M  FGV P V  ++++MD    +G   +   ++ +M + G+
Sbjct: 290 IDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGL 349

Query: 307 EPDIHVFSILAKG-----------------------------------YVRAGEPQKAES 331
            PD    SI+ +G                                   Y R G  ++A +
Sbjct: 350 CPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALA 409

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
             T M + GV PNVV ++++I G     KMQ AM+IY +M   GI PN+ TY  L+ G+ 
Sbjct: 410 TCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHA 469

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           +      A    + M E G+ P   T+ ++ D     GL RE +
Sbjct: 470 KNGGIDAAFRFHKEMIENGISPNAITVSVLVD-----GLCRENR 508



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 179/404 (44%), Gaps = 40/404 (9%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           +L  +G   +A  +F+ + E G RP   TY  L++   +     S   L  ++   G+ P
Sbjct: 222 VLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIP 281

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           ++++F  +I+   ++    EA  +F+ M   G  PT   YN+L+ G    G  +E+L L 
Sbjct: 282 NAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLY 341

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           Q M++   + P++ T +I+VR  C    I+ A   +  +   G+  +A  YN L   Y +
Sbjct: 342 QEMTR-LGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCR 400

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G    A      M    V PN  +   ++ G+ K G M+ AM     M    + PN+V 
Sbjct: 401 NGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVT 460

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQE-IF 298
           + +LI G      + G+D A    +E    G+ P+ +T S ++D        G C+E   
Sbjct: 461 YTALIHGH---AKNGGIDAAFRFHKEMIENGISPNAITVSVLVD--------GLCRENRV 509

Query: 299 DDMVK-----AGIE-PDIH------------------VFSILAKGYVRAGEPQKAESILT 334
            D V+     +GI+  DIH                  ++  L  G    G+  +A  + +
Sbjct: 510 QDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFS 569

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
            MRK G+  +   +T +I G C    +  AM +Y  M +IG+ P
Sbjct: 570 YMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 613



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/345 (22%), Positives = 148/345 (42%), Gaps = 23/345 (6%)

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
           ++ L+  +     P    C  ++ G  K      A      M    + P++V +N+LI  
Sbjct: 128 DEALYVFRRLWTLPALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINA 187

Query: 250 FLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
               +    V KA  + ++     + P+V+T+++++      G +G  + +FD M +AG+
Sbjct: 188 ---CRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGM 244

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P+ + +++L  G+ +  +   A  +   +   G+ PN V+FTT+I G+C A +   A  
Sbjct: 245 RPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKD 304

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           ++  M   G+ P +  Y +L+ G   +     A  L Q M   G+ P + T  +V     
Sbjct: 305 MFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLC 364

Query: 427 AIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQI------PGVV 480
             G  + A R L+   ED  ++        ++   R  NL  + +T  ++      P VV
Sbjct: 365 DGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVV 424

Query: 481 SSEHNGSSAAKI-RSQIVLRSDTVWTATKSLFVNTYGSGVQPMVV 524
           S        +K+ + QI +          +++      G++P VV
Sbjct: 425 SYSSLIDGHSKLGKMQIAM----------AIYTEMVAKGIEPNVV 459



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 78/181 (43%)

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
           +D+AL +       P +   + ++D    A       E+FD+M++ G+ P +  ++ L  
Sbjct: 127 LDEALYVFRRLWTLPALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLIN 186

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
                G   KA+ +   M    + PNV+ +T++I   C    +  A  +++ M E G+ P
Sbjct: 187 ACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRP 246

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           N  TY  L+ G+ +      A  L Q +   G+ P       + D +       EAK + 
Sbjct: 247 NQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMF 306

Query: 439 K 439
           +
Sbjct: 307 R 307


>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
 gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
          Length = 599

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 186/374 (49%), Gaps = 1/374 (0%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
            F+ L   G  PT  TY  +V   T+       L ++ +++K G+ P+ +++  +++  +
Sbjct: 179 FFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYA 238

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
             G+   A K+++ M  +G KP    YN L+  +   G+ +++L +L+ +  ++ + P  
Sbjct: 239 RGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANR-LLPTI 297

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY  ++  +    +I++A  V  ++  +G++P  V+YN+L    A+  +   A  ML E
Sbjct: 298 ETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNE 357

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M  N V PNER+   +  GY + G++E A     RMK+  +  ++V + +L+K       
Sbjct: 358 MLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGA 417

Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
                +    + + G+K + +T+ T++D W+  G + K +++ +DM K G   D   ++ 
Sbjct: 418 MQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTS 477

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
             K   R+G+ ++    L  MR+  +  N   +TT+I GW  A    +A+S YE+    G
Sbjct: 478 FIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASG 537

Query: 376 INPNLKTYETLLWG 389
           +  +      LL G
Sbjct: 538 LQLDSALSNCLLSG 551



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 197/420 (46%), Gaps = 1/420 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A + F     E   P  I Y ++V A  +    +++ +L++++E++G + +  L+
Sbjct: 101 GNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLY 160

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             ++N  +E  + ++ +  F ++K  G  PT +TY  ++K +   G   ++L +L+ M +
Sbjct: 161 TTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDK 220

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              V PN   Y +++  +        A+ V   MV++G++PD V YN L  A+ + G   
Sbjct: 221 -HGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMD 279

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
           +A  +L  ++ N++ P   T   I+ GY K GN++ A+    R+K   + P +V +NSL+
Sbjct: 280 KALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLL 339

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G    +  +     L  M   GV P+  +++ + + ++ AG + K   +F  M K  + 
Sbjct: 340 SGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLA 399

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
            DI  +  L K   ++G  Q+A  +   +   G+  N + + T++ GW    ++ +A  +
Sbjct: 400 IDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDL 459

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
              M + G + +   Y + +     +       E L VM EK +     T   +   W A
Sbjct: 460 LNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLA 519



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 97/416 (23%), Positives = 201/416 (48%), Gaps = 7/416 (1%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P +  YT+L+ A    +  +  ++   ++   G++ +  +F ++I+  + +GN + A  
Sbjct: 49  KPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEH 108

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
            F+K K     P    YN++++ Y   G  E    LL  M +++  + N   Y  ++  +
Sbjct: 109 WFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQM-EEEGFQGNLGLYTTVLNGF 167

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                 E+  +  +++ A G+ P A TY  + + + + G   +A  +L EM  + V PN+
Sbjct: 168 AEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNK 227

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
               +I+ GY + G+   A +    M    + P++V++N L+  F     +  +DKAL +
Sbjct: 228 MIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFC---KAGRMDKALGV 284

Query: 266 MEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           +E        P + T+++I+D +   G + K  E+FD +  AG+ P +  ++ L  G  +
Sbjct: 285 LENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAK 344

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           A + + A  +L  M   GV PN   +T +  G+  A  +++A  ++++M +  +  ++  
Sbjct: 345 ARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVA 404

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           Y  LL    ++    RA E+ Q + + G++  + T   + D W   G   +A+ +L
Sbjct: 405 YGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLL 460



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 184/386 (47%), Gaps = 1/386 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P L  Y  LV    R     +  +    +    +KP+  ++ ++I+A +E+ +++ A+ 
Sbjct: 14  KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 73

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
             ++M   G +   + + ++I GY + G  E +    +    + N+ P    YN +V+A+
Sbjct: 74  CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAE-NLVPGGIVYNSIVQAY 132

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C   ++E    ++ +M   G Q +   Y T+   +A+  +  +       ++   + P  
Sbjct: 133 CQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTA 192

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T G IV  + K GNM  A+  L  M +  V PN +++  ++ G+    D     K    
Sbjct: 193 ATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWED 252

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M   G+KPD+V ++ ++ A+  AG M K   + +++    + P I  ++ +  GYV+ G 
Sbjct: 253 MVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGN 312

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
            QKA  +   ++  G+ P VV + +++SG   A +M+ A  +  +M   G+ PN ++Y  
Sbjct: 313 IQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTA 372

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGV 411
           L  GY  A    +A  + Q M+++ +
Sbjct: 373 LTEGYARAGDVEKAFGMFQRMKKENL 398



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 182/372 (48%), Gaps = 7/372 (1%)

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KP    +  +++  +  G+   A   F+ M+ S  KP    Y +LI  Y      E ++ 
Sbjct: 14  KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 73

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             + M   + ++ N+  +  ++  + S  + E A +   K  A  + P  + YN++ +AY
Sbjct: 74  CTEEM-LSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAY 132

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G     E +L +M+    + N      +++G+ +  + E  + F +R+K   + P  
Sbjct: 133 CQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTA 192

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
             +  ++K F     +  + KAL ++EE    GV P+ + ++ IMD ++  G      ++
Sbjct: 193 ATYGCIVKLF---TKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKV 249

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           ++DMV AG++PDI +++IL   + +AG   KA  +L ++    + P +  +T+++ G+  
Sbjct: 250 WEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVK 309

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              +Q+A+ +++++   G+ P + +Y +LL G  +A+Q   A  +L  M   GV P + +
Sbjct: 310 GGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERS 369

Query: 418 IQLVADSWRAIG 429
              + + +   G
Sbjct: 370 YTALTEGYARAG 381



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 65/302 (21%), Positives = 148/302 (49%), Gaps = 1/302 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++  G +P ++ Y  LV A  +  R    L ++  +E + + P    + ++++   + GN
Sbjct: 253 MVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGN 312

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           + +A+++F ++K +G +P   +YN+L+ G     + E +  +L  M  +  V PN+R+Y 
Sbjct: 313 IQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLAN-GVVPNERSYT 371

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L   +     +E+A+ +  +M    +  D V Y  L +A  + G   RA ++  ++ + 
Sbjct: 372 ALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDA 431

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            ++ N  T   ++ G+ ++G +  A   L  M++   H + + + S IK      D++ V
Sbjct: 432 GLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEV 491

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
            + L +M E  ++ +  T++T++  W +A    +    ++    +G++ D  + + L  G
Sbjct: 492 TETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLLSG 551

Query: 320 YV 321
            +
Sbjct: 552 LI 553



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/334 (20%), Positives = 147/334 (44%), Gaps = 8/334 (2%)

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR 226
           +P    Y  L   YA++G+   A      M+ + ++PN      ++  Y +  +ME A+ 
Sbjct: 14  KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 73

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
               M    +  N  VF S+I G+    +++  +      +   + P  + +++I+ A+ 
Sbjct: 74  CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYC 133

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
            AG M   + +   M + G + ++ +++ +  G+    + +K  S    ++  G+ P   
Sbjct: 134 QAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAA 193

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            +  ++  +  A  M +A+ I E+M + G++PN   Y  ++ GY        A ++ + M
Sbjct: 194 TYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDM 253

Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAV-ESIHRKQN 465
              G++P      ++  ++   G   +A  VL++ E +R  +P  +   ++ +   +  N
Sbjct: 254 VSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRL-LPTIETYTSILDGYVKGGN 312

Query: 466 LSASNSTFLQI------PGVVSSEHNGSSAAKIR 493
           +  +   F +I      PGVVS     S  AK R
Sbjct: 313 IQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKAR 346



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 53/112 (47%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A  +F  + + G +   ITY T++    R+        L++ ++K G   D+I +
Sbjct: 416 GAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICY 475

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
            + I AC  SG+ +E  +    M++   +    TY TLI G+     P++++
Sbjct: 476 TSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAI 527


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 100/421 (23%), Positives = 204/421 (48%), Gaps = 23/421 (5%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           + Y  +V AL +  + +  + L+++++   M  D + +  +I      G + +A  +F++
Sbjct: 403 VLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEE 462

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           MK+ G +P   TYN L+ G+   G  +E+L+LL  +   + +KPN  T+N ++   C   
Sbjct: 463 MKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGT-QGLKPNSATHNRIIEGLCMAG 521

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            ++EA   +  +    ++     Y+ +   Y +   T +A ++   +    +   +++C 
Sbjct: 522 KVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCF 577

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
            ++S  C EG  + A+  L RM  L+V PN +++  LI  F    D         ++ E 
Sbjct: 578 KLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVER 637

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG----- 324
           G+ PDV+T++ +++ +     + + ++IF+DM + GI+PD+  ++++  G+ +       
Sbjct: 638 GITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMAR 697

Query: 325 ----------EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
                     E   A    + M++ G+ P+VV +T +I   C    +Q A+++Y++M   
Sbjct: 698 SLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIAR 757

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           G+ P++ TY  LL          RA  L+  M  KG+ P    + ++    R I  AR+ 
Sbjct: 758 GLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLH---RGILKARKV 814

Query: 435 K 435
           +
Sbjct: 815 Q 815



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 100/412 (24%), Positives = 201/412 (48%), Gaps = 24/412 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTL--ITYTTLVAALTRQKRFKSILSLISKVEKD 58
           ++ L   GK  EA  + N +  +G R +L  + YTTL+A    Q +     ++  ++++ 
Sbjct: 409 VDALCKLGKVEEAVELLNEM--KGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKER 466

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G++PD + +N ++   S +G   EA+++   +   G KP ++T+N +I+G    GK +E+
Sbjct: 467 GIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEA 526

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
              L  + +DK ++     Y+ +V  +C  N   +A+ +  ++   GI     +   L  
Sbjct: 527 EAFLNTL-EDKCLE----NYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLS 581

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           +    GE  +A  +L  M    V PN+   G ++  +C++G+M+ A      + E  + P
Sbjct: 582 SLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITP 641

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM------- 291
           +++ +  +I G+  +            M+E G+KPDV+T++ ++D  S   L        
Sbjct: 642 DVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQF 701

Query: 292 --GKCQEIFD------DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
             G  +E  D      +M + GI+PD+  +++L   + +    Q A ++   M   G+ P
Sbjct: 702 SKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQP 761

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           ++V +T ++S  C+   M RA+++  +M   GI P+ +    L  G  +A++
Sbjct: 762 DIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGILKARK 813



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 206/447 (46%), Gaps = 52/447 (11%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  +F  ++ EG  P    Y  L+ A  +       ++L + +  +G+K + ++ +
Sbjct: 312 KLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVS 371

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           +++    E G   E +  F++ +DSG       YN ++     +GK EE+++LL  M + 
Sbjct: 372 SILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEM-KG 430

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           + +  +   Y  L+  +C +  + +A N+  +M   GI+PD VTYN L   +++ G    
Sbjct: 431 RRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKE 490

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE--LEVHPNLV----- 241
           A ++L  +    ++PN  T   I+ G C  G +++A  FL  +++  LE +  +V     
Sbjct: 491 ALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCK 550

Query: 242 ---------VFNSLIK-GFLDIKDS----------DG-VDKALTLMEE---FGVKPDVVT 277
                    +F+ L K G L  K S          +G  DKAL L+E      V+P+ + 
Sbjct: 551 ANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIM 610

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           +  ++ A+   G M + Q +FD +V+ GI PD+  ++++  GY R    ++A  I   M+
Sbjct: 611 YGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMK 670

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
           + G+ P+V+ +T V+ G                        NLK   +L +  G  ++  
Sbjct: 671 ERGIKPDVITYTVVLDGHSKV--------------------NLKMARSLQFSKGSEEEKM 710

Query: 398 RAEELLQVMEEKGVRPKKSTIQLVADS 424
            A      M+E G++P      ++ DS
Sbjct: 711 DASPFWSEMKEMGIKPDVVCYTVLIDS 737



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 102/422 (24%), Positives = 189/422 (44%), Gaps = 7/422 (1%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
             YT ++     + + K    +   +  +G+ PD  ++ A+I+A  ++GN+ +A+ +   
Sbjct: 298 FAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHND 357

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M  +G K      +++++    +G   E +   +   +D  +  ++  YNI+V A C   
Sbjct: 358 MVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEF-RDSGIFLDEVLYNIVVDALCKLG 416

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            +EEA  ++ +M    +  D V Y TL   Y   G+   A+ M  EM+   + P+  T  
Sbjct: 417 KVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYN 476

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
           I+V G+ + G  ++A+  L  +    + PN    N +I+G          +  L  +E+ 
Sbjct: 477 ILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDK 536

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
            ++     +S ++D +  A    K  E+F  + K GI         L       GE  KA
Sbjct: 537 CLE----NYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKA 592

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             +L  M    V PN +M+  +I  +C    M+RA  +++ + E GI P++ TY  ++ G
Sbjct: 593 LILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMING 652

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL--AREAKRVLKSAEEDRQS 447
           Y        A ++   M+E+G++P   T  +V D    + L  AR  +    S EE   +
Sbjct: 653 YCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDA 712

Query: 448 MP 449
            P
Sbjct: 713 SP 714



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 190/397 (47%), Gaps = 11/397 (2%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P +++   L+  L    +    +++   +++ G+ P+   +   I A    GN +EA
Sbjct: 187 GFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEA 246

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +F++M+++G  P   T +T I+G  +  + +   + L+ + +  N   +   Y  ++R
Sbjct: 247 VDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRAL-RAANWPIDTFAYTAVIR 305

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +CS+  ++EA +V   MV  GI PD   Y  L  AY + G   +A  +  +M +N ++ 
Sbjct: 306 GFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKT 365

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N      I+   C+ G   + +      ++  +  + V++N ++     +   +   + L
Sbjct: 366 NCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELL 425

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M+   +  DVV ++T++  +   G +   + +F++M + GIEPDI  ++IL  G+ R 
Sbjct: 426 NEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRN 485

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA---MSIYEKMCEIGINPNL 380
           G  ++A  +L  +   G+ PN      +I G C A K++ A   ++  E  C       L
Sbjct: 486 GLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKC-------L 538

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           + Y  ++ GY +A    +A EL   + ++G+  KK +
Sbjct: 539 ENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKS 575



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/420 (23%), Positives = 184/420 (43%), Gaps = 37/420 (8%)

Query: 25  HRPTLI-TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           H   LI     LV A  R   F   +  + + ++ G  P  +  N ++N   E G +D A
Sbjct: 152 HSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMA 211

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + I++ +K  G  P   TY   IK     G  EE++ + + M ++  V PN  T +  + 
Sbjct: 212 VAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREM-EEAGVNPNAVTCSTYIE 270

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             CS    +  +  +  + A+    D   Y  + R +    +   AE +  +M N  + P
Sbjct: 271 GLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAP 330

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +    G ++  YCK GN+         ++ + +H ++V                      
Sbjct: 331 DGYIYGALIHAYCKAGNL---------LQAVALHNDMV---------------------- 359

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
                 G+K + V  S+I+      G+  +  + F +   +GI  D  +++I+     + 
Sbjct: 360 ----SNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKL 415

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+ ++A  +L  M+   +  +VV +TT+I+G+C   K+  A +++E+M E GI P++ TY
Sbjct: 416 GKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTY 475

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             L+ G+        A ELL  +  +G++P  +T   + +     G  +EA+  L + E+
Sbjct: 476 NILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLED 535



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 84/372 (22%), Positives = 176/372 (47%), Gaps = 22/372 (5%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  +A  +F  + E G  P ++TY  LV   +R    K  L L+  +   G+KP+S  
Sbjct: 450 QGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSAT 509

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            N +I     +G V EA      ++D         Y+ ++ GY       ++ +L   +S
Sbjct: 510 HNRIIEGLCMAGKVKEAEAFLNTLEDK----CLENYSAMVDGYCKANFTRKAYELFSRLS 565

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +   +      + +L  + C +   ++A  ++ +M+A  ++P+ + Y  L  A+ + G+ 
Sbjct: 566 KQGILVKKKSCFKLL-SSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDM 624

Query: 187 YRAEQMLFEMQNNQ-VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
            RA Q++F+M   + + P+  T  ++++GYC+   + +A      MKE  + P+++ +  
Sbjct: 625 KRA-QLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTV 683

Query: 246 LIKG-------------FLDIKDSDGVDKA--LTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
           ++ G             F    + + +D +   + M+E G+KPDVV ++ ++D+      
Sbjct: 684 VLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNN 743

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           +     ++D+M+  G++PDI  ++ L       G+  +A +++  M   G+ P+    + 
Sbjct: 744 LQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSV 803

Query: 351 VISGWCNAVKMQ 362
           +  G   A K+Q
Sbjct: 804 LHRGILKARKVQ 815



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/467 (21%), Positives = 197/467 (42%), Gaps = 80/467 (17%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           K +P+ A   F  L E G +  + TY  L+  L R +  + + SL+S++   G K   + 
Sbjct: 74  KNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIV--GSKESVLG 131

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F+                              T+ ++ L +G G V     S+ +L L  
Sbjct: 132 FD-----------------------------ITALFDVLREGGGEVEGEHSSVLILVL-- 160

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
                       ++LV+A+      +EA + +++    G  P  ++ N L     ++G+ 
Sbjct: 161 ------------DMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKI 208

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A  +   ++   + PN+ T GI +   C++GN E+A+     M+E  V+PN V  ++ 
Sbjct: 209 DMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTY 268

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I+G    K SD   +AL  +       D   ++ ++  + S   + + +++F DMV  GI
Sbjct: 269 IEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGI 328

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC---------N 357
            PD +++  L   Y +AG   +A ++   M   G+  N V+ ++++   C         +
Sbjct: 329 APDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVD 388

Query: 358 AVKMQRAMSIY----------EKMCEIG----------------INPNLKTYETLLWGYG 391
             K  R   I+          + +C++G                ++ ++  Y TL+ GY 
Sbjct: 389 QFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYC 448

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
              +   A+ + + M+E+G+ P   T  ++   +   GL +EA  +L
Sbjct: 449 LQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELL 495


>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
          Length = 838

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 181/368 (49%), Gaps = 1/368 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L+E    PT  TY  L+ A       +   ++ +++ K G  P ++++NA I+   + G+
Sbjct: 124 LLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGD 183

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
             +A++IF++MK   C+P+T+TY  LI  YG   K   +LK+   M   K  KPN  T+ 
Sbjct: 184 TQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQK-CKPNICTFT 242

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            LV A+  +   E+A  +  ++  +G++PD   YN L  AY++ G  Y A ++   MQ+ 
Sbjct: 243 ALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM 302

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
              P+  +  I+V  Y + G  EDA      MK L + P +     L+  +         
Sbjct: 303 GCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKC 362

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
           ++ +  M + G+KPD    +++++ +   G   K +E+   M K     DI  ++IL   
Sbjct: 363 EEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINI 422

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y RAG   + E +  S+    + P+VV +T+ I  +    +  R + ++E+M + G  P+
Sbjct: 423 YGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPD 482

Query: 380 LKTYETLL 387
             T + +L
Sbjct: 483 GGTAKNVL 490



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 172/362 (47%), Gaps = 3/362 (0%)

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           +    PD I +N +I+A  +     +A   + ++ ++ C PT  TY  L+K Y   G  E
Sbjct: 91  RSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLE 150

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           ++  +   M +     P+   YN  +         ++A  +  +M     QP   TY  L
Sbjct: 151 KAEAVFAEM-RKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTML 209

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
              Y +  ++Y A ++  EM++ + +PN  T   +V+ + +EG  E A     +++E  +
Sbjct: 210 INLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGL 269

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
            P++  +N+L++ +       G  +  +LM+  G +PD  +++ ++DA+  AGL    Q 
Sbjct: 270 EPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQA 329

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F+ M + GI P +    +L   Y RAG+  K E I+  M K G+ P+  +  ++++ + 
Sbjct: 330 VFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYG 389

Query: 357 NAVKMQRAMSIYEKMCEIGINP-NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
              + ++   +   M E G  P ++ TY  L+  YG A    R EEL + +  + + P  
Sbjct: 390 RLGQFEKMEEVLTAM-EKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDV 448

Query: 416 ST 417
            T
Sbjct: 449 VT 450



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 169/350 (48%), Gaps = 5/350 (1%)

Query: 93  SGCKPTTSTYNTLIKGYG--NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
           S   P    YN LI  YG  ++ K  ES  L  L   +    P + TY +L++A+C+   
Sbjct: 92  SSFHPDVICYNLLIDAYGQKSLYKKAESTYLELL---EARCVPTEDTYALLLKAYCTSGL 148

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           +E+A  V  +M   G  P AV YN       + G+T +A ++   M+ ++ +P+  T  +
Sbjct: 149 LEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTM 208

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           +++ Y K      A++  + M+  +  PN+  F +L+  F      +  ++    ++E G
Sbjct: 209 LINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAG 268

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           ++PDV  ++ +M+A+S AG      EIF  M   G EPD   ++I+   Y RAG  + A+
Sbjct: 269 LEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQ 328

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           ++   M++ G+ P +     ++S +  A K+ +   I  +M + GI P+     ++L  Y
Sbjct: 329 AVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLY 388

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
           G   Q  + EE+L  ME+       ST  ++ + +   G     + + +S
Sbjct: 389 GRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRS 438



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 154/314 (49%)

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
           +  P+   YN+L+ A+  K+  ++A +   +++ +   P   TY  L +AY   G   +A
Sbjct: 93  SFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKA 152

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
           E +  EM+     P+       + G  K G+ + A+    RMK     P+   +  LI  
Sbjct: 153 EAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINL 212

Query: 250 FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
           +     S    K    M     KP++ TF+ +++A++  GL  K +EIF+ + +AG+EPD
Sbjct: 213 YGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPD 272

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
           ++ ++ L + Y RAG P  A  I + M+  G  P+   +  ++  +  A   + A +++E
Sbjct: 273 VYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFE 332

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
            M  +GI P +K++  LL  Y  A +  + EE++  M + G++P    +  + + +  +G
Sbjct: 333 VMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLG 392

Query: 430 LAREAKRVLKSAEE 443
              + + VL + E+
Sbjct: 393 QFEKMEEVLTAMEK 406



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 151/307 (49%), Gaps = 37/307 (12%)

Query: 4   LVGKG-KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           L GK  K + A  +F+ +  +  +P + T+T LV A  R+   +    +  ++++ G++P
Sbjct: 212 LYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEP 271

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D   +NA++ A S +G    A +IF  M+  GC+P  ++YN ++  YG  G  E++  + 
Sbjct: 272 DVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVF 331

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           ++M +   + P  +++ +L+ A+     + +   +V +M  SGI+PD    N++   Y +
Sbjct: 332 EVMKR-LGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGR 390

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G+  + E++L  M+      +  T  I+++ Y + G       F  RM+EL        
Sbjct: 391 LGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAG-------FFARMEEL-------- 435

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           F SL               A  L+      PDVVT+++ + A+S      +C E+F++M+
Sbjct: 436 FRSL--------------PARNLI------PDVVTWTSRIGAYSRRKQYNRCLEVFEEMI 475

Query: 303 KAGIEPD 309
            AG  PD
Sbjct: 476 DAGCYPD 482



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/337 (19%), Positives = 156/337 (46%), Gaps = 1/337 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G   +A  +F  + + G  P+ + Y   +  L +    +  + +  ++++D  +P +  +
Sbjct: 147 GLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATY 206

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +IN   ++     A+K+F +M+   CKP   T+  L+  +   G  E++ ++ + + Q
Sbjct: 207 TMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQL-Q 265

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  ++P+   YN L+ A+        A  +   M   G +PD  +YN +  AY + G   
Sbjct: 266 EAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHE 325

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A+ +   M+   + P  ++  +++S Y + G +      + +M +  + P+  V NS++
Sbjct: 326 DAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSML 385

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             +  +   + +++ LT ME+     D+ T++ +++ +  AG   + +E+F  +    + 
Sbjct: 386 NLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLI 445

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           PD+  ++     Y R  +  +   +   M   G +P+
Sbjct: 446 PDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPD 482



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/315 (21%), Positives = 131/315 (41%), Gaps = 41/315 (13%)

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVV-----YKMVASGIQPDAVTYNTLARAYAQYG 184
           ++ PN  T++ ++     +  + + W+ +     + +  S   PD + YN L  AY Q  
Sbjct: 54  SLSPNHTTWDDIINV-AVQLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKS 112

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
              +AE    E+   +  P E T  +++  YC  G +E A                    
Sbjct: 113 LYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKA-------------------- 152

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
                          +     M ++G  P  V ++  +D     G   K  EIF+ M + 
Sbjct: 153 ---------------EAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRD 197

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
             +P    +++L   Y +A +   A  +   MR     PN+  FT +++ +      ++A
Sbjct: 198 RCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKA 257

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             I+E++ E G+ P++  Y  L+  Y  A  P+ A E+  +M+  G  P +++  ++ D+
Sbjct: 258 EEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDA 317

Query: 425 WRAIGLAREAKRVLK 439
           +   GL  +A+ V +
Sbjct: 318 YGRAGLHEDAQAVFE 332


>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
          Length = 577

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 191/381 (50%), Gaps = 7/381 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKS--ILSLISKVEKD 58
           M +    G+  +A  + + + ++   P L+++ TL+ A  +     +   L L+ +V + 
Sbjct: 1   MGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQA 60

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G++PD+I +N +I+ACS+  N+D+A+ +F++M  S C+P   TYN ++  +G  GK +E+
Sbjct: 61  GLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEA 120

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
             + + + + K  +P+  TYN L+ A+  +  +E    V  ++V +G + D +TYNT+  
Sbjct: 121 ELMFKELVE-KGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIH 179

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
            Y + G    A  +  EM+     P+  T  ++V    K   + +A + L  M +  + P
Sbjct: 180 MYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKP 239

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
            LV F++LI  +      D  ++    M E GVKPD + +  ++D ++ +    K   ++
Sbjct: 240 TLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLY 299

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
             M+K G +PD  ++ +L     +  E  + E ++  M        +V+ + +I   C  
Sbjct: 300 RAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKAEC-- 357

Query: 359 VKMQRAMSIYEKMCEIGINPN 379
             + +  S+ ++ C  G  P+
Sbjct: 358 --ISQGASLLKRACLQGYEPD 376



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 165/338 (48%), Gaps = 9/338 (2%)

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVG--KPEESLKLLQLMSQDKNVK 132
           + SG  D+A ++   M+D   +P   ++NTLI      G      +L+LL  + Q   ++
Sbjct: 5   ARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQ-AGLR 63

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+  TYN L+ A    +++++A  V  +M+AS  +PD  TYN +   + + G+   AE M
Sbjct: 64  PDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELM 123

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             E+     +P+  T   ++  + KEG++E   R    + +     + + +N++I  +  
Sbjct: 124 FKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGK 183

Query: 253 IKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
           +     +D AL L +E    G  PD VT++ ++D+      + +  ++ ++M  AG++P 
Sbjct: 184 MGR---LDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPT 240

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
           +  FS L   Y ++G    AE     M + GV P+ + +  ++  +  + + ++ M +Y 
Sbjct: 241 LVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYR 300

Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
            M + G  P+   Y+ LL    +  +    E ++Q ME
Sbjct: 301 AMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDME 338



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/315 (22%), Positives = 154/315 (48%), Gaps = 3/315 (0%)

Query: 109 YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE--AWNVVYKMVASGI 166
           Y   G+ +++ +LL  M +D++++P+  ++N L+ A      +    A  +++++  +G+
Sbjct: 4   YARSGRFDDARQLLDAM-RDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGL 62

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR 226
           +PDA+TYNTL  A +Q      A  +  EM  ++ RP+  T   +VS + + G  ++A  
Sbjct: 63  RPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAEL 122

Query: 227 FLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWS 286
               + E    P+ V +NSL+  F    D + V++    + + G + D +T++T++  + 
Sbjct: 123 MFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYG 182

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
             G +     ++D+M   G  PD   +++L     +     +A  +L  M   G+ P +V
Sbjct: 183 KMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLV 242

Query: 347 MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
            F+ +I  +  + +   A   +++M E G+ P+   Y  +L  +  + +  +   L + M
Sbjct: 243 TFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAM 302

Query: 407 EEKGVRPKKSTIQLV 421
            + G +P     Q++
Sbjct: 303 IKDGYKPDDGLYQVL 317



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 135/283 (47%), Gaps = 2/283 (0%)

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG--ETYRAEQMLFEMQNNQVR 202
           +      ++A  ++  M    I+PD V++NTL  A A+ G      A ++L E++   +R
Sbjct: 4   YARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLR 63

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P+  T   ++S   +  N++DA+     M   E  P+L  +N+++        +   +  
Sbjct: 64  PDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELM 123

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              + E G +PD VT+++++ A++  G + + + + +++VKAG   D   ++ +   Y +
Sbjct: 124 FKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGK 183

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            G    A  +   MR  G  P+ V +T ++       ++  A  + E+M + G+ P L T
Sbjct: 184 MGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVT 243

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           +  L+  Y ++ +   AE     M E GV+P +    ++ D +
Sbjct: 244 FSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVF 286



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 116/233 (49%), Gaps = 14/233 (6%)

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI-----KGFLDIKDSDGVDKALTLMEEF 269
           Y + G  +DA + L  M++ ++ P+LV FN+LI      G L    + GV  AL L+ E 
Sbjct: 4   YARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCL----AAGV--ALELLHEV 57

Query: 270 ---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              G++PD +T++T++ A S    +     +F++M+ +   PD+  ++ +   + R G+ 
Sbjct: 58  RQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKA 117

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           Q+AE +   + + G  P+ V + +++  +     ++R   + E++ + G   +  TY T+
Sbjct: 118 QEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTM 177

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           +  YG+  +   A  L   M   G  P   T  ++ DS   +    EA +VL+
Sbjct: 178 IHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLE 230



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 130/267 (48%), Gaps = 14/267 (5%)

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED--AMRFLYRMKELEVH 237
           YA+ G    A Q+L  M++  + P+  +   +++   K G +    A+  L+ +++  + 
Sbjct: 4   YARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLR 63

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKC 294
           P+ + +N+LI           +D A+ + EE      +PD+ T++ ++   S  G  GK 
Sbjct: 64  PDAITYNTLISA---CSQGSNLDDAVAVFEEMIASECRPDLWTYNAMV---SVHGRCGKA 117

Query: 295 QE---IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
           QE   +F ++V+ G +PD   ++ L   + + G+ ++ E +   + K G   + + + T+
Sbjct: 118 QEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTM 177

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           I  +    ++  A+ +Y++M  IG  P+  TY  L+   G+  +   A ++L+ M + G+
Sbjct: 178 IHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGL 237

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVL 438
           +P   T   +  ++   G   +A+R  
Sbjct: 238 KPTLVTFSALICAYAKSGRQDDAERTF 264


>gi|147790305|emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]
          Length = 722

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 201/454 (44%), Gaps = 46/454 (10%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+ + A  +   L + G      +YT LV   +++  ++    ++ +++ DG KP+ I +
Sbjct: 237 GQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITY 296

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             ++    + G + +A+ I  KM   GC P   TYN +++   +  +  E  +LLQ++ Q
Sbjct: 297 TVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVIDQ 356

Query: 128 DKNVKPNDRTY-----------------------------------NILVRAWCSKNSIE 152
            K + P+  TY                                   NI     C +N   
Sbjct: 357 -KEISPDSFTYAALTGGLLKRGQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSG 415

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML--FEMQNNQVRPNERTCGI 210
           EA +++  MV  G+ P  V+YNT+   + +      A Q+   FE  NN   P+  +   
Sbjct: 416 EALSLLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNS--PDVVSFNT 473

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF- 269
           I+S  CK+GN     R LYRM+   V  N+V    LI+ F  I     + + L L+E   
Sbjct: 474 ILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIGK---ISECLELLESMI 530

Query: 270 --GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
             G+ P VVTF+ ++D     GL+G    IF +    G  P+   ++IL    +R G   
Sbjct: 531 RNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNTGYFPNTTSYNILIHASIREGNDS 590

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
             E +L  M  + + P+ V + + I G C   K+  A+ + ++M E G+ P +  Y T+L
Sbjct: 591 LVEQLLRDMYSWRLKPDAVTYGSFIKGLCKEGKISVAIQLRDQMLESGLTPTVTIYNTIL 650

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
               +  + W    LL+ M   G  P   +I+++
Sbjct: 651 AAMFQRGKFWDIVSLLKDMTMDGCEPNAVSIEIL 684



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/417 (21%), Positives = 182/417 (43%), Gaps = 1/417 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P   T+  L+  +T     ++      ++ + G  P       ++      G++ ++
Sbjct: 113 GPYPNASTFNILLDGMTSTGNLRAAFFFAEEMWRSGFLPSFTSLLKILKKWLGLGSLVDS 172

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           M +F+ M      PT  T N LI      G   E+  + +++   K       +YN ++ 
Sbjct: 173 MSVFEFMLRLEYFPTEPTLNLLISMLSKAGMAREAHFVFRVL-LGKGCLKCAHSYNPILW 231

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           A C       A  ++Y +   G   +A +Y  L   +++ G    A  ML EM+ +  +P
Sbjct: 232 ALCKCGQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKP 291

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  T  +IV   C EG + DA+  L +M +    P++V +N +++          + + L
Sbjct: 292 NVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELL 351

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
            ++++  + PD  T++ +       G +    ++   ++ AG   D+ V++I      R 
Sbjct: 352 QVIDQKEISPDSFTYAALTGGLLKRGQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRE 411

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
            +  +A S+L SM + G+ P  V + T+++G+C    +  A+ +++       +P++ ++
Sbjct: 412 NKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSF 471

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
            T+L    +         +L  ME +GV+    +   +   + AIG   E   +L+S
Sbjct: 472 NTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIGKISECLELLES 528



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 92/487 (18%), Positives = 179/487 (36%), Gaps = 86/487 (17%)

Query: 34  TLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS 93
           TL  ++       ++ +L S  E +   P+ +     +   + SGN+ +++     ++  
Sbjct: 17  TLCFSMVNFSYLCALPTLDSIEETNTHDPNHLQLQHTMQNDAASGNLRKSLCALNSIR-- 74

Query: 94  GCKPTTSTYNTLIKGYGNVGKPEESL--KLLQLMSQDKNVKP--NDRTYNILVRAWCSKN 149
              P+ + YN L+  Y         +  +L+Q+    K + P  N  T+NIL+    S  
Sbjct: 75  --YPSVNDYNALLYHYLKSSSRHLIVLDELVQVYFGMKRLGPYPNASTFNILLDGMTSTG 132

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
           ++  A+    +M  SG  P   +   + + +   G    +  +   M   +  P E T  
Sbjct: 133 NLRAAFFFAEEMWRSGFLPSFTSLLKILKKWLGLGSLVDSMSVFEFMLRLEYFPTEPTLN 192

Query: 210 IIVS-----------------------------------GYCKEGNMEDAMRFLYRMKEL 234
           +++S                                     CK G    A+  LY +K++
Sbjct: 193 LLISMLSKAGMAREAHFVFRVLLGKGCLKCAHSYNPILWALCKCGQSYTALALLYSLKKM 252

Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGV-DKALTLMEEF---GVKPDVVTFSTIMDAWSSAGL 290
               N   + +L+ GF      +G+ ++A  +++E    G KP+V+T++ I+      G 
Sbjct: 253 GAVHNAASYTALVYGF----SKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGR 308

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSI----------------------------------- 315
           +G   +I   M K G +PDI  +++                                   
Sbjct: 309 IGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAA 368

Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
           L  G ++ G+ + A  +L  +   G   +V ++       C   K   A+S+ + M E G
Sbjct: 369 LTGGLLKRGQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKG 428

Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
           + P   +Y T+L G+        A +L    E     P   +   +  +    G +   +
Sbjct: 429 LVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIR 488

Query: 436 RVLKSAE 442
           RVL   E
Sbjct: 489 RVLYRME 495



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 77/175 (44%), Gaps = 1/175 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  E   +   +I  G  PT++T+  L+  L +     +   +  +    G  P++  +
Sbjct: 517 GKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNTGYFPNTTSY 576

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I+A    GN     ++ + M     KP   TY + IKG    GK   +++L   M  
Sbjct: 577 NILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGSFIKGLCKEGKISVAIQLRDQM-L 635

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           +  + P    YN ++ A   +    +  +++  M   G +P+AV+   L +A ++
Sbjct: 636 ESGLTPTVTIYNTILAAMFQRGKFWDIVSLLKDMTMDGCEPNAVSIEILKQAMSK 690



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 1/144 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G    AH IF      G+ P   +Y  L+ A  R+     +  L+  +    +
Sbjct: 545 LDKLCKNGLLGTAHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRL 604

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD++ + + I    + G +  A+++  +M +SG  PT + YNT++      GK  + + 
Sbjct: 605 KPDAVTYGSFIKGLCKEGKISVAIQLRDQMLESGLTPTVTIYNTILAAMFQRGKFWDIVS 664

Query: 121 LLQLMSQDKNVKPNDRTYNILVRA 144
           LL+ M+ D   +PN  +  IL +A
Sbjct: 665 LLKDMTMD-GCEPNAVSIEILKQA 687


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 180/363 (49%), Gaps = 6/363 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           PT+  Y  L+ AL R+    +++ +   + K G++P+   +N +I A  ++  V  A ++
Sbjct: 125 PTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRM 184

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M   GC+P   ++ T+I     + + +E+  +L  M+      P   +YN +V A C
Sbjct: 185 LDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMT------PVGASYNAVVHALC 238

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
            +  + E + VV +MV  G++PD V Y ++  A+ +  E   A  +L  M      PN +
Sbjct: 239 GQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQ 298

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T  ++V G+  +G + DA+     M      P+ + +N LI+G   I D        + M
Sbjct: 299 TFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCM 358

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            +    PDV T+ST++D +S AG +     I++DM  AG +P++ V++ +     +    
Sbjct: 359 GKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMF 418

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +AE+++  M      PN + F T+I   C+  +  RA++++  M   G  PN +TY  L
Sbjct: 419 DQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNEL 478

Query: 387 LWG 389
           L G
Sbjct: 479 LHG 481



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 89/389 (22%), Positives = 181/389 (46%), Gaps = 1/389 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L G+ +  E   + + ++  G RP  + YT++V A  + +  +   ++++++  +G 
Sbjct: 234 VHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGC 293

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+   F  ++    + G V +A+ ++  M   G  P+T +YN LI+G  ++G  + +L 
Sbjct: 294 VPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALF 353

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M +  +  P+ RTY+ L+  +     ++ A ++   M  +G +P+ V Y  +    
Sbjct: 354 VFSCMGK-SDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVL 412

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +     +AE ++ +M      PN  T   ++   C  G    A+   + M+     PN 
Sbjct: 413 CKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPND 472

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +N L+ G     + +   + LT M   G +  +V+++T +       ++ +   +   
Sbjct: 473 RTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGR 532

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  GI+PD   F+ +   Y + G  + A  +L  M       N+V +T+++SG C+  K
Sbjct: 533 MIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHK 592

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWG 389
           +  AM    KM   GI PN  T+  L+ G
Sbjct: 593 LDDAMVYLLKMLYEGICPNEATWNVLVRG 621



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 153/346 (44%), Gaps = 6/346 (1%)

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           A +   + +G++D      Q+M+  G           I  +   G  + +LK       D
Sbjct: 60  ATVRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYRARHD 119

Query: 129 KNVK-PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                P  R YN L+ A   +N +     V   M  +G++P+  TYN L +A  Q     
Sbjct: 120 LGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVG 179

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A +ML EM     RP+E +   I+S  CK   +++A   L  M  +    N VV ++L 
Sbjct: 180 AARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGASYNAVV-HALC 238

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             F   +    VD+    M   G++PD V +++I+ A+  A  +     I   MV  G  
Sbjct: 239 GQFRMREVFLVVDE----MVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCV 294

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P++  F++L KG+   G+   A  +   M   G  P+ + +  +I G C+   ++RA+ +
Sbjct: 295 PNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFV 354

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           +  M +    P+++TY TL+ G+ +A     A  +   M   G +P
Sbjct: 355 FSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKP 400


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 202/421 (47%), Gaps = 12/421 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L   G   E + ++  ++EE     + T+  ++    +    K     + K+ + G+
Sbjct: 164 LTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGL 223

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD     + I     S +VD A ++F++M +        +YN LI G    G+ +E++ 
Sbjct: 224 SPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRIDEAVS 279

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M +D    PN  TY  L++  C KN + +A  ++ +M+   + PD +TYN+L    
Sbjct: 280 LFVRM-KDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVPDLITYNSLIAGQ 337

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G    A ++L  M+   + P++RT G  +   CK   +E+A R    + E  V  N+
Sbjct: 338 CRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANV 397

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEI 297
           ++++ LI G+  +     VD+A  L E+   K   P+  TF+ ++    SAG + +   +
Sbjct: 398 IMYSVLIDGYCKVGK---VDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSL 454

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           FD MVK G++P ++ F+IL    ++ G+   A   L  M   G  P    +   I  +C+
Sbjct: 455 FDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCS 514

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           A K+Q A  +  +M E G+ P+  TY +L+  YG+    + A ++L+ M +    P   T
Sbjct: 515 AGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHT 574

Query: 418 I 418
            
Sbjct: 575 F 575



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 217/482 (45%), Gaps = 30/482 (6%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           H+A  + + ++E    P LITY +L+A   R     S   L+S +++ G+ PD   +   
Sbjct: 309 HKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCF 368

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           I+   +S  V+EA ++F  + + G       Y+ LI GY  VGK +E+  L + M   KN
Sbjct: 369 IDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKM-LSKN 427

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
             PN  T+N L+   CS  +++EA ++  +MV  G++P   T+N L     + G+   A 
Sbjct: 428 CSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAH 487

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           + L +M ++  +P  RT    +  YC  G +++A   + +MKE  V P+   + SLIK +
Sbjct: 488 KCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAY 547

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIM------------------DAWSSAGLMG 292
             +  +      L  M +   +P   TF +++                  ++ S+ G + 
Sbjct: 548 GKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVP 607

Query: 293 KCQ-----------EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
                         E+F++M K G  PD   +  L  G  +      A  +L  M+K G+
Sbjct: 608 GSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGI 667

Query: 342 HPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEE 401
            P+ ++F  VIS  C   K   A +I E M   G +P L+  +TL+ G  E  +  R   
Sbjct: 668 SPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNS 727

Query: 402 LLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIH 461
           + + +   G    +   +++ D     GL  E  ++ +  E++  +   +   I  + +H
Sbjct: 728 VFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKLH 787

Query: 462 RK 463
            K
Sbjct: 788 GK 789



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 94/464 (20%), Positives = 176/464 (37%), Gaps = 118/464 (25%)

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           MS+D   K + + YN L+        ++E   +  +M+   +  D  T+N +   Y + G
Sbjct: 147 MSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMG 206

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR------------------ 226
               A+Q + +M    + P+  T    + GYC+  +++ A R                  
Sbjct: 207 FVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEVSYNQLIH 266

Query: 227 -------------FLYRMKELEVHPN---------------------------------- 239
                           RMK+   +PN                                  
Sbjct: 267 GLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHKAMGLLDEMLERNLVPD 326

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           L+ +NSLI G       D   + L+LM+E G+ PD  T+   +D    +  + + + +FD
Sbjct: 327 LITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFD 386

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            + + G+  ++ ++S+L  GY + G+  +A  +   M      PN   F  +I G C+A 
Sbjct: 387 SLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAG 446

Query: 360 KMQRAMSIYEKMCEIGINPNL-----------------------------------KTYE 384
            ++ A+S++++M ++G+ P +                                   +TY 
Sbjct: 447 NLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYN 506

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE- 443
             +  Y  A +   AE+++  M+E+GV P   T   +  ++  +GL   A  VLKS  + 
Sbjct: 507 AFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDA 566

Query: 444 -----------------DRQSMPNKKDEIAVESIHRKQNLSASN 470
                            D++ +  K  E  VES+    ++  SN
Sbjct: 567 DCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSN 610


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/482 (23%), Positives = 222/482 (46%), Gaps = 48/482 (9%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P +++Y T++    R+ +     +L  ++   G+ PD + +N +I+   ++  VD A  +
Sbjct: 302 PDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAV 361

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           FQ+M D G KP+  TYN LI GY + GK +E ++LL+ MS   +++P+   Y +L+   C
Sbjct: 362 FQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMST-HDLEPDCFIYALLLDYLC 420

Query: 147 SKNSIEEAWNVVYKMVASGIQPDA---------------------VTYNTLARAYAQYG- 184
                 EA N+   ++  GI+PDA                     V Y  L  A  + G 
Sbjct: 421 KNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGR 480

Query: 185 -------------ETY---------RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNME 222
                        E Y         +AE+++FEM +  +R +      ++   C+EG + 
Sbjct: 481 VDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVM 540

Query: 223 DAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIM 282
           +A R +  M  + V P+++ +N+L+ G      +D   K L +M   G+KP+  T++T++
Sbjct: 541 EAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLL 600

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
             +  A  +     +  +M+  G  PD+  ++ +  G  + G   +A+ +  +M      
Sbjct: 601 HGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQ 660

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
            ++  +  +++G C    +  A  +++ +C  G+  ++ T+  ++    +  +   A +L
Sbjct: 661 WDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDL 720

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK--DEIAVESI 460
              +   G+ P   T  L+A++    G + E   VL SA E+  + PN +  + +    +
Sbjct: 721 FATISAYGLVPDVETYCLIAENLIKEG-SLEELGVLFSAMEENGTAPNSRMLNALVRRFL 779

Query: 461 HR 462
           HR
Sbjct: 780 HR 781



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/461 (22%), Positives = 208/461 (45%), Gaps = 42/461 (9%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F  ++++G +P+  TY  L+       ++K ++ L+ ++    ++PD  ++  +++
Sbjct: 358 AKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLD 417

Query: 73  ------ACSESGNV---------------DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGN 111
                  C+E+ N+               DEA+ IF KM+  G  P    Y  LI     
Sbjct: 418 YLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCK 477

Query: 112 VGKPEES-LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
           +G+ +++ LK  Q++++              V   C+    E+A  +V++M+  GI+ D 
Sbjct: 478 LGRVDDAILKFNQMINE--------------VYGLCTVEKWEKAEELVFEMLDQGIRLDV 523

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           V +NTL     + G    A++++  M    VRP+  +   +V G+C  G  ++A + L  
Sbjct: 524 VVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDV 583

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSS 287
           M  + + PN   +N+L+ G+   +    +D A +L+ E    G  PDVVT++TI+     
Sbjct: 584 MVSIGLKPNEFTYNTLLHGYCKARR---IDDAYSLLREMLMNGPTPDVVTYNTILHGLFQ 640

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
            G   + +E++ +M+ +  + D++ ++I+  G  +     +A  +  S+   G+  +++ 
Sbjct: 641 TGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIIT 700

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           F  +I       K + AM ++  +   G+ P+++TY  +     +         L   ME
Sbjct: 701 FNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAME 760

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSM 448
           E G  P    +  +   +   G    A   L   +E   S+
Sbjct: 761 ENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSL 801



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/468 (22%), Positives = 201/468 (42%), Gaps = 49/468 (10%)

Query: 6   GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSIL------SLISKVEK-- 57
           G    H+A  +F+ L+      ++  +  L+ A++R     S L      SL  ++ +  
Sbjct: 128 GSLASHDALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVREC 187

Query: 58  -DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
            D + PD   ++ +I      G ++    +F  +  +G +     +N L+KG  +  + +
Sbjct: 188 SDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLD 247

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS---GIQPDAVTY 173
           E+  +L     +    PN  +YN LV+ +C++N  EEA  +++ M         PD V+Y
Sbjct: 248 EATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSY 307

Query: 174 NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
           NT+   + + G+  +A  +  +M +  + P+  T   ++ G CK   ++ A     +M +
Sbjct: 308 NTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLD 367

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
             V P+   +N LI G+L       V + L  M    ++PD   ++ ++D     G   +
Sbjct: 368 KGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTE 427

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
            + IFD +++ GI+PD  +               +A  I   MR+ G+ PNVV +  +I 
Sbjct: 428 ARNIFDSVIRKGIKPDAMI--------------DEAVCIFDKMRQQGLSPNVVNYGALID 473

Query: 354 -----------------------GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
                                  G C   K ++A  +  +M + GI  ++  + TL+   
Sbjct: 474 ALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDL 533

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
               +   A+ L+++M   GVRP   +   + D     G   EA ++L
Sbjct: 534 CREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLL 581



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 189/385 (49%), Gaps = 30/385 (7%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-------FKSILS-------------- 50
           EA  IF+ + ++G  P ++ Y  L+ AL +  R       F  +++              
Sbjct: 448 EAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKA 507

Query: 51  --LISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
             L+ ++   G++ D ++FN ++      G V EA ++ + M   G +P   +YNTL+ G
Sbjct: 508 EELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDG 567

Query: 109 YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQP 168
           +   G+ +E+ KLL +M     +KPN+ TYN L+  +C    I++A++++ +M+ +G  P
Sbjct: 568 HCLTGRTDEAAKLLDVMVS-IGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTP 626

Query: 169 DAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL 228
           D VTYNT+     Q G    A+++   M N++ + +  T  II++G CK   +++A +  
Sbjct: 627 DVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMF 686

Query: 229 YRM--KELEVHPNLVVFNSLIKGFLD-IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
             +  K L++H  ++ FN +I   L   K  D +D   T+   +G+ PDV T+  I +  
Sbjct: 687 QSLCSKGLQLH--IITFNIMIGALLKGGKKEDAMDLFATI-SAYGLVPDVETYCLIAENL 743

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
              G + +   +F  M + G  P+  + + L + ++  G+  +A + L+ + +       
Sbjct: 744 IKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEA 803

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEK 370
              + +IS +      Q A S+ EK
Sbjct: 804 STASMLISLYSRGEYQQLAKSLPEK 828



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/423 (21%), Positives = 184/423 (43%), Gaps = 46/423 (10%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  EA  IF+ +I +G +P  +                  + +  K+ + G+
Sbjct: 416 LDYLCKNGRCTEARNIFDSVIRKGIKPDAM--------------IDEAVCIFDKMRQQGL 461

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKM-----------------------KDSGCKP 97
            P+ + + A+I+A  + G VD+A+  F +M                        D G + 
Sbjct: 462 SPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRL 521

Query: 98  TTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
               +NTL+      G+  E+ +L++LM +   V+P+  +YN LV   C     +EA  +
Sbjct: 522 DVVVFNTLMCDLCREGRVMEAQRLIELMLR-VGVRPDVISYNTLVDGHCLTGRTDEAAKL 580

Query: 158 VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
           +  MV+ G++P+  TYNTL   Y +      A  +L EM  N   P+  T   I+ G  +
Sbjct: 581 LDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQ 640

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPD 274
            G   +A      M       ++  +N ++ G      ++ VD+A  + +     G++  
Sbjct: 641 TGRFSEAKELYLNMINSRTQWDMYTYNIILNGLC---KNNCVDEAFKMFQSLCSKGLQLH 697

Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
           ++TF+ ++ A    G      ++F  +   G+ PD+  + ++A+  ++ G  ++   + +
Sbjct: 698 IITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFS 757

Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL--LWGYGE 392
           +M + G  PN  M   ++  + +   + RA +   K+ E   +    T   L  L+  GE
Sbjct: 758 AMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSRGE 817

Query: 393 AKQ 395
            +Q
Sbjct: 818 YQQ 820



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 117/247 (47%), Gaps = 4/247 (1%)

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
           +++V P+  T  I++  +C+ G +E        + +     N +VFN L+KG  D K  D
Sbjct: 188 SDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLD 247

Query: 258 -GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK---AGIEPDIHVF 313
              +  L  M EFG  P+VV+++T++  + +     +  E+   M         PD+  +
Sbjct: 248 EATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSY 307

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
           + +  G+ R G+  KA ++   M   G+ P+VV + TVI G C A  + RA +++++M +
Sbjct: 308 NTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLD 367

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
            G+ P+  TY  L+ GY    +      LL+ M    + P      L+ D     G   E
Sbjct: 368 KGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTE 427

Query: 434 AKRVLKS 440
           A+ +  S
Sbjct: 428 ARNIFDS 434


>gi|359476071|ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 629

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 201/454 (44%), Gaps = 46/454 (10%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+ + A  +   L + G      +YT LV   +++  ++    ++ +++ DG KP+ I +
Sbjct: 129 GQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITY 188

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             ++    + G + +A+ I  KM   GC P   TYN +++   +  +  E  +LLQ++ Q
Sbjct: 189 TVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVIDQ 248

Query: 128 DKNVKPNDRTY-----------------------------------NILVRAWCSKNSIE 152
            K + P+  TY                                   NI     C +N   
Sbjct: 249 -KEISPDSFTYAALTGGLLKRDQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSG 307

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML--FEMQNNQVRPNERTCGI 210
           EA +++  MV  G+ P  V+YNT+   + +      A Q+   FE  NN   P+  +   
Sbjct: 308 EALSLLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNS--PDVVSFNT 365

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF- 269
           I+S  CK+GN     R LYRM+   V  N+V    LI+ F  I     + + L L+E   
Sbjct: 366 ILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIGK---ISECLELLESMI 422

Query: 270 --GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
             G+ P VVTF+ ++D     GL+G    IF +    G  P+   ++IL    +R G   
Sbjct: 423 RNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNTGYFPNTTSYNILIHASIREGNDS 482

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
             E +L  M  + + P+ V + + I G C   K+  A+ + ++M E G+ P +  Y T+L
Sbjct: 483 LVEQLLRDMYSWRLKPDAVTYGSFIKGLCKEGKISVAIQLRDQMLESGLTPTITIYNTIL 542

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
               +  + W    LL+ M   G  P   +I+++
Sbjct: 543 AAMFQRGKFWDIVSLLKDMTMDGCEPNAVSIEIL 576



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 90/422 (21%), Positives = 186/422 (44%), Gaps = 11/422 (2%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P   T+  L+  +T     ++      ++ + G  P       ++      G++ ++
Sbjct: 5   GPYPNASTFNILLDGMTSTGNLRAAFFFAEEMWRSGFLPSFTSLLKILKKWLGLGSLVDS 64

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           M +F+ M      PT  T N LI      G   E+  + +++   K       +YN ++ 
Sbjct: 65  MSVFEFMLRLEYFPTEPTLNLLISMLSKAGMAREAHFVFRVL-LGKGCLKCAHSYNPILW 123

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           A C       A  ++Y +   G   +A +Y  L   +++ G    A  ML EM+ +  +P
Sbjct: 124 ALCKCGQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKP 183

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  T  +IV   C EG + DA+  L +M +    P++V +N +++          + + L
Sbjct: 184 NVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELL 243

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ-----EIFDDMVKAGIEPDIHVFSILAK 318
            ++++  + PD  T++ +     + GL+ + Q     ++   ++ AG   D+ V++I   
Sbjct: 244 QVIDQKEISPDSFTYAAL-----TGGLLKRDQVRVANKLLLYVISAGCTVDVAVYNIYFH 298

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
              R  +  +A S+L SM + G+ P  V + T+++G+C    +  A+ +++       +P
Sbjct: 299 CLCRENKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSP 358

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           ++ ++ T+L    +         +L  ME +GV+    +   +   + AIG   E   +L
Sbjct: 359 DVVSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIGKISECLELL 418

Query: 439 KS 440
           +S
Sbjct: 419 ES 420



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 77/175 (44%), Gaps = 1/175 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  E   +   +I  G  PT++T+  L+  L +     +   +  +    G  P++  +
Sbjct: 409 GKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNTGYFPNTTSY 468

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I+A    GN     ++ + M     KP   TY + IKG    GK   +++L   M  
Sbjct: 469 NILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGSFIKGLCKEGKISVAIQLRDQM-L 527

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           +  + P    YN ++ A   +    +  +++  M   G +P+AV+   L +A ++
Sbjct: 528 ESGLTPTITIYNTILAAMFQRGKFWDIVSLLKDMTMDGCEPNAVSIEILKQAMSK 582



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 38/195 (19%), Positives = 77/195 (39%), Gaps = 6/195 (3%)

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSS 287
           MK L  +PN   FN L+ G   +  +  +  A    EE    G  P   +   I+  W  
Sbjct: 1   MKRLGPYPNASTFNILLDG---MTSTGNLRAAFFFAEEMWRSGFLPSFTSLLKILKKWLG 57

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
            G +     +F+ M++    P     ++L     +AG  ++A  +   +   G       
Sbjct: 58  LGSLVDSMSVFEFMLRLEYFPTEPTLNLLISMLSKAGMAREAHFVFRVLLGKGCLKCAHS 117

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           +  ++   C   +   A+++   + ++G   N  +Y  L++G+ +      A  +L  M+
Sbjct: 118 YNPILWALCKCGQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMK 177

Query: 408 EKGVRPKKSTIQLVA 422
             G +P   T  ++ 
Sbjct: 178 IDGCKPNVITYTVIV 192



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 38/62 (61%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK   A  + + ++E G  PT+  Y T++AA+ ++ +F  I+SL+  +  DG +P+
Sbjct: 510 LCKEGKISVAIQLRDQMLESGLTPTITIYNTILAAMFQRGKFWDIVSLLKDMTMDGCEPN 569

Query: 64  SI 65
           ++
Sbjct: 570 AV 571


>gi|168011113|ref|XP_001758248.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690704|gb|EDQ77070.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 658

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/444 (23%), Positives = 223/444 (50%), Gaps = 6/444 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  + +  EA  +F+ L + G  P  + Y  +V    R+ R ++ L L++++   G +PD
Sbjct: 88  LSKESRVEEAMLLFDQLKQLGVSPGPMAYNAIVGTCAREDRLETALELMNQMRGSGFQPD 147

Query: 64  SILFNAMINACSESG-NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           ++ +  +  AC++    VD   ++   ++  G +  T  YN +I  Y   G P+++ + +
Sbjct: 148 NVNYTLVFQACAKKRVGVDVISRVCANIEQEGLEMDTKLYNDVINAYCRAGDPDKAFQYM 207

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
            LM Q  ++ P+ R+Y+ L+        +++A     +M +   + +  T N L  AY +
Sbjct: 208 GLM-QACDLVPDVRSYSSLIETLVVVRRLDDAEAAYAEMKSKSYKINLRTLNALLSAYTR 266

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                + E+++ + ++  ++ +  + G+++  Y + G ++ A    + MK   V  N  +
Sbjct: 267 KSLLEQVEKLMQDAEDAGLKLSTFSYGLLIDAYSRAGRLDQAKAAFHNMKVENVPANAFI 326

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           ++ L+  + + +  DG  + L  M    +KP+   F+ ++D +   G + +    F  M 
Sbjct: 327 YSRLMVAYRNARQWDGTIRLLKDMYASNIKPNQFIFNILIDTYGKFGRLPQAMRTFAQMD 386

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS--GWCNAVK 360
           K G +PD+  ++ L + + RAG   +A  +L  M++    P++  +  +++  GW N  +
Sbjct: 387 KEGFKPDVVTWNSLIEAHCRAGLITEALDLLKQMQERECVPSLHTYNIILNALGWHN--R 444

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
            +    + ++M   G++PN+ TY TL+  YG +K+   A E L+ M+ +G++P  S    
Sbjct: 445 WKEMALLLDEMRFKGLDPNVVTYTTLVDSYGTSKRYREASEYLKQMKSQGLQPSTSVYCA 504

Query: 421 VADSWRAIGLAREAKRVLKSAEED 444
           +A+S+   GL  +A  V KS E+D
Sbjct: 505 LANSYAKRGLCEQAMEVFKSMEKD 528



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/449 (23%), Positives = 209/449 (46%), Gaps = 18/449 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N     G P +A      +      P + +Y++L+  L   +R     +  ++++    
Sbjct: 191 INAYCRAGDPDKAFQYMGLMQACDLVPDVRSYSSLIETLVVVRRLDDAEAAYAEMKSKSY 250

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K +    NA+++A +    +++  K+ Q  +D+G K +T +Y  LI  Y   G+ +++  
Sbjct: 251 KINLRTLNALLSAYTRKSLLEQVEKLMQDAEDAGLKLSTFSYGLLIDAYSRAGRLDQAKA 310

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M  + NV  N   Y+ L+ A+ +    +    ++  M AS I+P+   +N L   Y
Sbjct: 311 AFHNMKVE-NVPANAFIYSRLMVAYRNARQWDGTIRLLKDMYASNIKPNQFIFNILIDTY 369

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            ++G   +A +   +M     +P+  T   ++  +C+ G + +A+  L +M+E E  P+L
Sbjct: 370 GKFGRLPQAMRTFAQMDKEGFKPDVVTWNSLIEAHCRAGLITEALDLLKQMQERECVPSL 429

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +N ++           +   L  M   G+ P+VVT++T++D++ ++    +  E    
Sbjct: 430 HTYNIILNALGWHNRWKEMALLLDEMRFKGLDPNVVTYTTLVDSYGTSKRYREASEYLKQ 489

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G++P   V+  LA  Y + G  ++A  +  SM K GV  N+ M   +I+ +  A K
Sbjct: 490 MKSQGLQPSTSVYCALANSYAKRGLCEQAMEVFKSMEKDGVELNLSMLNLLINAFGVAGK 549

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
              A S+++ + E+G++P++ TY TL+    +A+Q  +  ++ + M   G  P       
Sbjct: 550 YVEAFSVFDYILEVGMSPDVVTYTTLMKALIKAEQLDQVPDVYEQMVRAGCTPDDM---- 605

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMP 449
                        AK +L+SA+  +Q  P
Sbjct: 606 -------------AKDMLRSAQRFKQRGP 621



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 74/346 (21%), Positives = 165/346 (47%), Gaps = 3/346 (0%)

Query: 106 IKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
           I G     + EE++ L   + Q   V P    YN +V     ++ +E A  ++ +M  SG
Sbjct: 85  ITGLSKESRVEEAMLLFDQLKQ-LGVSPGPMAYNAIVGTCAREDRLETALELMNQMRGSG 143

Query: 166 IQPDAVTYNTLARAYAQYGETYRA-EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
            QPD V Y  + +A A+         ++   ++   +  + +    +++ YC+ G+ + A
Sbjct: 144 FQPDNVNYTLVFQACAKKRVGVDVISRVCANIEQEGLEMDTKLYNDVINAYCRAGDPDKA 203

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
            +++  M+  ++ P++  ++SLI+  + ++  D  + A   M+    K ++ T + ++ A
Sbjct: 204 FQYMGLMQACDLVPDVRSYSSLIETLVVVRRLDDAEAAYAEMKSKSYKINLRTLNALLSA 263

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           ++   L+ + +++  D   AG++     + +L   Y RAG   +A++   +M+   V  N
Sbjct: 264 YTRKSLLEQVEKLMQDAEDAGLKLSTFSYGLLIDAYSRAGRLDQAKAAFHNMKVENVPAN 323

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
             +++ ++  + NA +    + + + M    I PN   +  L+  YG+  +  +A     
Sbjct: 324 AFIYSRLMVAYRNARQWDGTIRLLKDMYASNIKPNQFIFNILIDTYGKFGRLPQAMRTFA 383

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            M+++G +P   T   + ++    GL  EA  +LK  +E R+ +P+
Sbjct: 384 QMDKEGFKPDVVTWNSLIEAHCRAGLITEALDLLKQMQE-RECVPS 428



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 66/317 (20%), Positives = 131/317 (41%), Gaps = 45/317 (14%)

Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
            I ++G  KE  +E+AM    ++K+L V P  + +N+++         D ++ AL LM +
Sbjct: 82  AIAITGLSKESRVEEAMLLFDQLKQLGVSPGPMAYNAIVGT---CAREDRLETALELMNQ 138

Query: 269 F---GVKPDVVTFSTIMDAWSSAGL-MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
               G +PD V ++ +  A +   + +     +  ++ + G+E D  +++ +   Y RAG
Sbjct: 139 MRGSGFQPDNVNYTLVFQACAKKRVGVDVISRVCANIEQEGLEMDTKLYNDVINAYCRAG 198

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           +P KA   +  M+   + P+V  ++++I       ++  A + Y +M       NL+T  
Sbjct: 199 DPDKAFQYMGLMQACDLVPDVRSYSSLIETLVVVRRLDDAEAAYAEMKSKSYKINLRTLN 258

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
            LL  Y       + E+L+Q  E+ G++    +  L+ D++   G   +AK         
Sbjct: 259 ALLSAYTRKSLLEQVEKLMQDAEDAGLKLSTFSYGLLIDAYSRAGRLDQAKAAF------ 312

Query: 445 RQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSEHNGSSAAKIRSQIVLRSDTVW 504
                               N+   N     +P         ++    R  +  R+   W
Sbjct: 313 -------------------HNMKVEN-----VPA--------NAFIYSRLMVAYRNARQW 340

Query: 505 TATKSLFVNTYGSGVQP 521
             T  L  + Y S ++P
Sbjct: 341 DGTIRLLKDMYASNIKP 357


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 214/466 (45%), Gaps = 67/466 (14%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G +P  + Y TL+++  R+ R +    L+ ++ +DG+ PD + FN+ I+A   +G + EA
Sbjct: 216 GVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEA 275

Query: 84  MKIFQKMK---DSGC-KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ------------ 127
            +IF+ M+   + G  +P  +T+N +++G+   G  EE+  L++ M +            
Sbjct: 276 SRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNI 335

Query: 128 ----------------------DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
                                 DK ++PN  ++N ++   C    I +A  ++  M++SG
Sbjct: 336 WLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSG 395

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           I PD VTY+TL       G+  +A  +L EM      PN  TC I++    KEG + +A 
Sbjct: 396 IGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAE 455

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK------------- 272
           + L +M E     + V  N +I G      S  +D+A+ ++E   +              
Sbjct: 456 KLLQKMNERSYDLDNVTCNIVIDGLCK---SGKLDEAVEIVEGMWIHGSAALGNLGNSFI 512

Query: 273 -------------PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
                        PD++T+S I++    AG + + ++ F +MV   + PD  ++      
Sbjct: 513 GLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHS 572

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           + + G+   A  +L  M K G + ++  + ++I G  +  ++     + + M E GI PN
Sbjct: 573 FCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPN 632

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           + TY  ++    E  +   A  LL  M +KG+ P  S+ +L+  ++
Sbjct: 633 ICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAF 678



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 191/410 (46%), Gaps = 13/410 (3%)

Query: 69  AMINACSESGNVDEAMKIFQKMKDS--GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           A+I   ++SG  D A   FQ  +       P    YN +++        E+ +     + 
Sbjct: 84  ALIRILAKSGLSDLAFSQFQSFRSQVPANPPPVYLYNMVLES----SLREDKVDSFSWLY 139

Query: 127 QD---KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           +D     V P   T N+L+   C     E+A  V  KM   G +P+  ++  L R Y + 
Sbjct: 140 KDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRA 199

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G + RA ++L  M +  V+PN+     ++S +C+EG  E+A R + RM+E  + P++V F
Sbjct: 200 GLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTF 259

Query: 244 NSLIKGFLD---IKDSDGVDKALTLMEEFGV-KPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           NS I        I ++  + + + + EE G+ +P++ TF+ +++ +   G++ + + + +
Sbjct: 260 NSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVE 319

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            M + G   ++  ++I   G VR G+  +A+  L  M   G+ PN+  F TV+ G C   
Sbjct: 320 SMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNG 379

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
            +  A  I   M   GI P+  TY TLL G     +  +A  +L  M  +G  P   T  
Sbjct: 380 LISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCN 439

Query: 420 LVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSAS 469
           ++  S    G   EA+++L+   E    + N    I ++ + +   L  +
Sbjct: 440 ILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEA 489



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 108/475 (22%), Positives = 201/475 (42%), Gaps = 61/475 (12%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+  +A  +F+ +  +G RP   ++  LV    R       L L+  +   G++P+
Sbjct: 161 LCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPN 220

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++N +I++    G  +EA ++ ++M++ G  P   T+N+ I    + GK  E+ ++ +
Sbjct: 221 KVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFR 280

Query: 124 LMSQDKNV---KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            M  D+ +   +PN  T+N+++  +C +  +EEA  +V  M  +G   +  +YN      
Sbjct: 281 DMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGL 340

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A+  L EM +  + PN  +   ++ G CK G + DA   +  M    + P+ 
Sbjct: 341 VRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDT 400

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP--------------------------- 273
           V +++L+ G          +  L  M   G  P                           
Sbjct: 401 VTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQK 460

Query: 274 --------DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE------------------ 307
                   D VT + ++D    +G + +  EI + M   G                    
Sbjct: 461 MNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSN 520

Query: 308 -----PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
                PD+  +SI+  G  +AG   +A      M    +HP+ +++ T I  +C   K+ 
Sbjct: 521 GKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKIS 580

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
            A  + + M + G N +L+TY +L+ G G   Q +    LL  M+EKG+ P   T
Sbjct: 581 SAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICT 635



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 203/432 (46%), Gaps = 31/432 (7%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P   L+N ++ +      VD    +++ M  +G  P T T N LI G  + G+ E++ ++
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
              M   K  +PN+ ++ ILVR +C       A  ++  M + G+QP+ V YNTL  ++ 
Sbjct: 174 FDKMGV-KGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFC 232

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMK---ELEV-H 237
           + G    AE+++  M+ + + P+  T    +S  C  G + +A R    M+   EL +  
Sbjct: 233 REGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPR 292

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKC 294
           PN+  FN +++GF        +++A TL+E     G   ++ +++  +      G + + 
Sbjct: 293 PNITTFNLMLEGFCK---EGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEA 349

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
           Q    +MV  GIEP+I+ F+ +  G  + G    A  I+  M   G+ P+ V ++T++ G
Sbjct: 350 QLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHG 409

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
            C+  K+ +A +I  +M   G +PN  T   LL    +  + + AE+LLQ M E+     
Sbjct: 410 CCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLD 469

Query: 415 KSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFL 474
             T  +V D     GL +  K  L  A E  + M           IH    L    ++F+
Sbjct: 470 NVTCNIVID-----GLCKSGK--LDEAVEIVEGM----------WIHGSAALGNLGNSFI 512

Query: 475 QIPGVVSSEHNG 486
              G+V S  NG
Sbjct: 513 ---GLVDSSSNG 521



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/456 (24%), Positives = 192/456 (42%), Gaps = 28/456 (6%)

Query: 15  YIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINAC 74
           +++  ++  G  P   T   L+A L    RF+    +  K+   G +P+   F  ++   
Sbjct: 137 WLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGY 196

Query: 75  SESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPN 134
             +G    A+++   M   G +P    YNTLI  +   G+ EE+ +L++ M +D  + P+
Sbjct: 197 CRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMRED-GLFPD 255

Query: 135 DRTYNILVRAWCSKNSIEEAWNVVYKMVAS---GI-QPDAVTYNTLARAYAQYGETYRAE 190
             T+N  + A CS   I EA  +   M      G+ +P+  T+N +   + + G    A+
Sbjct: 256 VVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAK 315

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
            ++  M+ N       +  I + G  + G + +A   L  M +  + PN+  FN+++ G 
Sbjct: 316 TLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGL 375

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
                       + LM   G+ PD VT+ST++    S G + K   I  +M++ G  P+ 
Sbjct: 376 CKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNT 435

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
           +  +IL     + G   +AE +L  M +     + V    VI G C + K+  A+ I E 
Sbjct: 436 YTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEG 495

Query: 371 M-------------CEIGIN----------PNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           M               IG+           P+L TY  ++ G  +A +   A +    M 
Sbjct: 496 MWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMV 555

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            K + P          S+   G    A RVLK  E+
Sbjct: 556 GKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEK 591



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/368 (23%), Positives = 169/368 (45%), Gaps = 17/368 (4%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV  GK  EA      ++++G  P + ++ T++  L +         ++  +   G+ PD
Sbjct: 340 LVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPD 399

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ ++ +++ C  +G V +A  I  +M   GC P T T N L+      G+  E+ KLLQ
Sbjct: 400 TVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQ 459

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M++ ++   ++ T NI++   C    ++EA  +V  M   G           + A    
Sbjct: 460 KMNE-RSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHG-----------SAALGNL 507

Query: 184 GETYRAEQMLFEMQNN--QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           G ++     L +  +N  +  P+  T  II++G CK G +++A +    M    +HP+ +
Sbjct: 508 GNSFIG---LVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSI 564

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
           ++++ I  F          + L  ME+ G    + T+++++    S   + +   + DDM
Sbjct: 565 IYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDM 624

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
            + GI P+I  ++ +       G  + A S+L  M + G+ PN+  F  +I  +C A   
Sbjct: 625 KEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDF 684

Query: 362 QRAMSIYE 369
                ++E
Sbjct: 685 GVVKEVFE 692



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/224 (20%), Positives = 92/224 (41%), Gaps = 33/224 (14%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK   A  +   + + G   +L TY +L+  L  + +   I  L+  +++ G+ P+   +
Sbjct: 577 GKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTY 636

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLK---- 120
           N MI+   E G + +A  +  +M   G  P  S++  LIK +    + G  +E  +    
Sbjct: 637 NNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALS 696

Query: 121 -------LLQLM-------------------SQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
                  L  LM                   + D+     +  YN L+   C    +E A
Sbjct: 697 ICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENA 756

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
            ++++KM+  G + D  ++  +     + G+ + A+++   M +
Sbjct: 757 SDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMD 800


>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 179/353 (50%), Gaps = 10/353 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P+++ ++ L+ ++TR K + ++LSL  +++  G+  ++   N +IN+      +  A  +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
              +   G +P+T+T+ TLI+G    GK  E+L+L   M+ +   +P+  TY  L+   C
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGE-GFQPDVLTYGTLINGLC 126

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               + EA ++   M+A GI P+  TY++L       G    A ++ + M + ++ P++ 
Sbjct: 127 KDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQL 186

Query: 207 TCGIIVSGYCKEGN---MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           T   +V   CKEG    M+ AM     M +  + P+ V +N+LI G   +     +  A+
Sbjct: 187 TFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGR---LRDAI 243

Query: 264 TLMEE---FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
            L  E   +G  PD+VT+  + D       + +   +   +    ++PDIH++SI+  G 
Sbjct: 244 ALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGM 303

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
            RAGE + A  + + +   G+HP+V  +T +I+G C    +  A  ++ +M E
Sbjct: 304 CRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDE 356



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 147/317 (46%), Gaps = 3/317 (0%)

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
           +  N  T NIL+ ++C  N +  A++V+  ++  G QP   T+ TL R     G+   A 
Sbjct: 41  IPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEAL 100

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
           Q+  +M     +P+  T G +++G CK+  + +A+     M    + PN   ++SLI G 
Sbjct: 101 QLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGL 160

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL---MGKCQEIFDDMVKAGIE 307
             +       +    M    + PD +TF+T++DA    G+   M K   +F++M + G+ 
Sbjct: 161 CILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLI 220

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD   ++ L  G    G  + A ++   M  YG  P++V +  +    C   ++  AM +
Sbjct: 221 PDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVL 280

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
            + +    ++P++  Y  ++ G   A +   A +L   +  KG+ P   T  ++ +    
Sbjct: 281 LKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQ 340

Query: 428 IGLAREAKRVLKSAEED 444
            GL  EA ++    +E+
Sbjct: 341 QGLLAEASKLFGEMDEN 357



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 142/291 (48%), Gaps = 4/291 (1%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +++ G++P+  T+TTL+  L  + +    L L  K+  +G +PD + +  +IN   +   
Sbjct: 71  ILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQ 130

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           + EA+ +F  M   G  P   TY++LI G   +G  +E+++L   M   K + P+  T+N
Sbjct: 131 LTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK-IMPDQLTFN 189

Query: 140 ILVRAWCSKNSI---EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
            LV A C +  I   ++A  +  +M   G+ PD VTYNTL       G    A  +  EM
Sbjct: 190 TLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEM 249

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
                 P+  T  I+    CK   + +AM  L  ++   + P++ +++ ++ G     + 
Sbjct: 250 VVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGEL 309

Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           +      + +   G+ PDV T++ +++     GL+ +  ++F +M +  IE
Sbjct: 310 EAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDIE 360



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 122/247 (49%), Gaps = 4/247 (1%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  EA  +F+ +  EG +P ++TY TL+  L + ++    LSL S +   G+ P++  
Sbjct: 93  EGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFT 152

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQ 123
           ++++I+     G+  EA+++F  M      P   T+NTL+      G +   ++++ L +
Sbjct: 153 YSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFE 212

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            MSQ + + P+  TYN L+   C    + +A  + ++MV  G  PD VTY  L     + 
Sbjct: 213 EMSQ-QGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKN 271

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                A  +L  ++   + P+     I++ G C+ G +E A     ++    +HP++  +
Sbjct: 272 HRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTY 331

Query: 244 NSLIKGF 250
             +I G 
Sbjct: 332 TIMINGL 338



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 95/209 (45%)

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P++V F+ L+     +K    V      M+ FG+  +  T + +++++     +G    +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
             D++K G +P    F+ L +G    G+  +A  +   M   G  P+V+ + T+I+G C 
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             ++  A+S++  M   GI+PN  TY +L+ G         A  L   M  + + P + T
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187

Query: 418 IQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
              + D+    G+ +   + +   EE  Q
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQ 216



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 57/121 (47%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +A  +F+ ++  G  P L+TY  L   L +  R    + L+  +E   + PD  ++
Sbjct: 237 GRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIY 296

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +++    +G ++ A  +F K+   G  P   TY  +I G    G   E+ KL   M +
Sbjct: 297 SIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDE 356

Query: 128 D 128
           +
Sbjct: 357 N 357


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 193/383 (50%), Gaps = 5/383 (1%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ ++ + +++G + +A+++F+ MK   C P+  TYN LI    N G+  ++L L Q M 
Sbjct: 13  YDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMK 72

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           ++K V+P+  TYN L+   CS  + E A  ++ +M    I  +  TY+++ ++  +  + 
Sbjct: 73  REKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKP 132

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             + ++L EM      P+      ++ G+ +  NME A      M E    P+ V ++ L
Sbjct: 133 EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 192

Query: 247 IKGFLDIKDSDGVDKALT--LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           I G   I   D   K L+   M   G  P+V+TFST++      G + K  E+F  M++A
Sbjct: 193 IHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEA 252

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G +P+ + ++ L  G  RA +  +A  +   M +  + P+ V + ++I+G+C    M  A
Sbjct: 253 GCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEA 312

Query: 365 MSIYEKMC-EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ-LVA 422
             +Y +M    G+ P + T+ TL+ G+ +  +  RA EL+  M  KG+     T + L+A
Sbjct: 313 EKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIA 372

Query: 423 DSWRAIGLAREAKRVLKSAEEDR 445
              RA  L  EA  V K   E +
Sbjct: 373 GLSRATKL-DEALEVYKQMREKK 394



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 194/382 (50%), Gaps = 5/382 (1%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           Y  +V +L +       L +   ++ +   P  + +N +IN+   +G   +A+ +FQ MK
Sbjct: 13  YDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMK 72

Query: 92  -DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
            +   +P   TYNTLI G  + G  E + KLL  M +DKN+  N  TY+ ++++   +  
Sbjct: 73  REKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEM-RDKNIAANVFTYSSIIKSLVKEAK 131

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
            EE++ V+ +M+A+G  PD   +N + + +A+     +A ++   M  +  +P+  +  I
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 211 IVSGYCKEGNMEDAMRFLYR--MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
           ++ G  K G ++++++ L    M+     PN++ F++LI G     + +   +    M E
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            G KP+  T++T++     A  + + +E+F+ M +A I PD   ++ L  GY + G   +
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311

Query: 329 AESILTSMR-KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           AE +   M    G+ P +V F T+I G+C   K+ RA  +  +M   G+  +  TY  L+
Sbjct: 312 AEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILI 371

Query: 388 WGYGEAKQPWRAEELLQVMEEK 409
            G   A +   A E+ + M EK
Sbjct: 372 AGLSRATKLDEALEVYKQMREK 393



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 212/443 (47%), Gaps = 5/443 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG-MKP 62
           L   G   +A  +F  +  E   P+L+TY  L+ +      F   L L   ++++  ++P
Sbjct: 20  LAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEP 79

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D   +N +I+    SGN + A K+  +M+D        TY+++IK      KPEES K+L
Sbjct: 80  DRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVL 139

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           + M       P+   +N +++ +   N++E+A  V   MV SG +PD V+Y+ L    A+
Sbjct: 140 EEM-MAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAK 198

Query: 183 YGETYRAEQMLFEMQNNQVR--PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            G+   + ++L EM        PN  T   ++ G C+ G +E A+     M E    PN 
Sbjct: 199 IGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNK 258

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             + +LI G    +      +    M +  + PD V +++++  +   G M + ++++ +
Sbjct: 259 YTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYRE 318

Query: 301 MV-KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           M   AG++P I  F+ L  G+ + G+  +A  ++  M   G+  +   +  +I+G   A 
Sbjct: 319 MSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRAT 378

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           K+  A+ +Y++M E     +  +  + + G  +     +A  + +   + G  P   T +
Sbjct: 379 KLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFR 438

Query: 420 LVADSWRAIGLAREAKRVLKSAE 442
           ++++S   +G   +A+++++ A+
Sbjct: 439 ILSESLIKLGRVEDAQKLMEPAK 461


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 208/418 (49%), Gaps = 10/418 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   GK  EA   F+ +  +GH+P L+TY+ L+     +     +L+L + +E +G+
Sbjct: 339 MSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGI 398

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL- 119
             D  ++N +I+A  + G +DEAM IF +M++ G  P   TY T+I  +  +G+  +++ 
Sbjct: 399 VADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMD 458

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGI-QPDAVTYNTLAR 178
           K  Q+++    +KP+   YN L++ +C   ++ +A  ++ +M++ GI +P+ V +N++  
Sbjct: 459 KFNQMIAM--GLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIIN 516

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           +  + G    A+ +   + +   RP+  T   ++ GY   G ME A   L  M  + + P
Sbjct: 517 SLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEP 576

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQ 295
           ++V +++L+ G+     +  +D  L L  E    GVKP  +T+  I+    + G     +
Sbjct: 577 DVVTYSALLDGYC---RNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAK 633

Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
           ++  +M+++G   DI    I+  G  R     +A ++   +    V  N+ +  T+I   
Sbjct: 634 KMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAM 693

Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
               K + A  +++ +   G+ PN  TY  ++    +      A+ +  +ME+ G  P
Sbjct: 694 YKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAP 751



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/437 (22%), Positives = 206/437 (47%), Gaps = 2/437 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  E   +F  +   G  P + T  + +++L +  + K        +   G KPD + +
Sbjct: 311 GQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTY 370

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +++  +  G V + + +F  M+ +G     S YN LI  YG  G  +E++ +   M Q
Sbjct: 371 SVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQM-Q 429

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           ++ V P+  TY  ++ A+     + +A +   +M+A G++PD + YN+L + +  +G   
Sbjct: 430 ERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLV 489

Query: 188 RAEQMLFEMQNNQV-RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
           +A++++ EM +  + RPN      I++  CKEG + +A      +  +   P+++ FNSL
Sbjct: 490 KAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSL 549

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G+  +   +     L  M   G++PDVVT+S ++D +   G +     +F +M+  G+
Sbjct: 550 IDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGV 609

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           +P    + I+  G    G    A+ +   M + G   ++     ++ G C       A++
Sbjct: 610 KPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIA 669

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           +++K+  + +  N+    T++    + ++   A EL   +   G+ P  ST  ++  +  
Sbjct: 670 LFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLL 729

Query: 427 AIGLAREAKRVLKSAEE 443
             G   EA  +    E+
Sbjct: 730 KEGSVEEADNMFSLMEK 746



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 204/437 (46%), Gaps = 8/437 (1%)

Query: 10  PHEAHYIFNCLIEEGHRP-----TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           P  A  +FN +  E  RP     T+ TY  L+    R  R     +L  +  K G+K D 
Sbjct: 95  PSLAVALFNRICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDV 154

Query: 65  ILFNAMINACSESGNVDEAMKIF-QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           I+ N ++     +   D+A+ +   +M + G +P T +Y+T++K      + + +L LL 
Sbjct: 155 IVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLH 214

Query: 124 LM-SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
            M  +     PN  +YN ++  +  +  + +A N+ ++M+  G+ PD VTY++   A  +
Sbjct: 215 TMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCK 274

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                +AE +L +M +N   P++ T   ++ GY   G  ++       M    + P++  
Sbjct: 275 ARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFT 334

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
            NS +        S    +    M   G KPD+VT+S ++  +++ G +     +F+ M 
Sbjct: 335 CNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSME 394

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             GI  D  V++IL   Y + G   +A  I T M++ GV P+   + TVI+ +    ++ 
Sbjct: 395 GNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLA 454

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV-RPKKSTIQLV 421
            AM  + +M  +G+ P+   Y +L+ G+       +A+EL+  M  +G+ RP       +
Sbjct: 455 DAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSI 514

Query: 422 ADSWRAIGLAREAKRVL 438
            +S    G   EA+ + 
Sbjct: 515 INSLCKEGRVVEAQDIF 531



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/368 (23%), Positives = 161/368 (43%), Gaps = 37/368 (10%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM-KPDSIL 66
           G+  +A   FN +I  G +P  I Y +L+              LIS++   G+ +P+++ 
Sbjct: 451 GRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVF 510

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           FN++IN+  + G V EA  IF  +   G +P   T+N+LI GYG VGK E++  +L  M 
Sbjct: 511 FNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMI 570

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
               ++P+  TY+ L+  +C    I++   +  +M++ G++P  +TY  +       G T
Sbjct: 571 S-VGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRT 629

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A++M  EM  +    +  TCGII+ G C+    ++A+    ++  + V  N+ + N++
Sbjct: 630 VGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTM 689

Query: 247 IKGFLDIKDSD---------------------GV--------------DKALTLMEEFGV 271
           I     ++  +                     GV              D   +LME+ G 
Sbjct: 690 IDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGC 749

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            P     + I+      G + K       +    I  +    S++   + R G+ ++   
Sbjct: 750 APSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIK 809

Query: 332 ILTSMRKY 339
            L +M ++
Sbjct: 810 SLPAMYQF 817



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/356 (21%), Positives = 137/356 (38%), Gaps = 74/356 (20%)

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P   TYNIL+   C  +     + +  + + +G++ D +  N                  
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVAN------------------ 158

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR-FLYRMKELEVHPNLVVFNSLIKGFL 251
                            I++   C     +DA+   L+RM EL V P+ + +++++K   
Sbjct: 159 -----------------ILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLC 201

Query: 252 -DIKDSDGVDKALTLMEEFG-VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
            D +    +D   T++++ G   P+VV+++T++  +   G + K   +F +M++ G+ PD
Sbjct: 202 EDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPD 261

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW-------------- 355
           +  +S       +A    KAE +L  M   G  P+ V +  +I G+              
Sbjct: 262 VVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFR 321

Query: 356 ---------------------CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
                                C   K + A   ++ M   G  P+L TY  LL GY    
Sbjct: 322 EMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEG 381

Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
                  L   ME  G+    S   ++ D++   G+  EA  +    +E R  MP+
Sbjct: 382 YVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQE-RGVMPD 436


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 190/395 (48%), Gaps = 1/395 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G R  L T+  ++       +    LS++ K+ K G +PD +   +++N       V +A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
           + +  KM + G KP    YN +I       +  ++    + + + K ++PN  TY  LV 
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER-KGIRPNVVTYTALVN 233

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C+ +   +A  ++  M+   I P+ +TY+ L  A+ + G+   A+++  EM    + P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +  T   +++G C    +++A +    M       ++V +N+LI GF   K  +   K  
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M + G+  + VT++T++  +  AG + K QE F  M   GI PDI  ++IL  G    
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           GE +KA  I   M+K  +  ++V +TTVI G C   K++ A S++  +   G+ P++ TY
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
            T++ G          E L   M+++G+     T+
Sbjct: 474 TTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 98/427 (22%), Positives = 212/427 (49%), Gaps = 1/427 (0%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K ++A  +F+ +++    P+++ +  L++A+ + K++  ++SL  K+E  G++ D   FN
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +IN       V  A+ I  KM   G +P   T  +L+ G+    +  +++ L+  M + 
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE- 183

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
              KP+   YN ++ + C    + +A++   ++   GI+P+ VTY  L            
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A ++L +M   ++ PN  T   ++  + K G + +A      M  + + P++V ++SLI 
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303

Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
           G       D  ++   LM   G   DVV+++T+++ +  A  +    ++F +M + G+  
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           +   ++ L +G+ +AG+  KA+   + M  +G+ P++  +  ++ G C+  ++++A+ I+
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           E M +  ++ ++ TY T++ G  +  +   A  L   +  KG++P   T   +       
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483

Query: 429 GLAREAK 435
           GL  E +
Sbjct: 484 GLLHEVE 490



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 180/373 (48%), Gaps = 36/373 (9%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           + +  +A  + + ++E G++P ++ Y  ++ +L + KR         ++E+ G++P+ + 
Sbjct: 168 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 227

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           + A++N    S    +A ++   M      P   TY+ L+  +   GK  E+ +L + M 
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +  ++ P+  TY+ L+   C  + I+EA  +   MV+ G   D V+YNTL          
Sbjct: 288 R-MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL---------- 336

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
                                    ++G+CK   +ED M+    M +  +  N V +N+L
Sbjct: 337 -------------------------INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I+GF    D D   +  + M+ FG+ PD+ T++ ++      G + K   IF+DM K  +
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           + DI  ++ + +G  + G+ ++A S+  S+   G+ P++V +TT++SG C    +    +
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEA 491

Query: 367 IYEKMCEIGINPN 379
           +Y KM + G+  N
Sbjct: 492 LYTKMKQEGLMKN 504



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 179/372 (48%), Gaps = 7/372 (1%)

Query: 41  RQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS 100
           R  +    + L S + K    P  + FN +++A  +    D  + + +KM+  G +    
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
           T+N +I  +    +   +L +L  M +    +P+  T   LV  +C +N + +A ++V K
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLK-LGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           MV  G +PD V YN +  +  +      A     E++   +RPN  T   +V+G C    
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE---FGVKPDVVT 277
             DA R L  M + ++ PN++ +++L+  F+    +  V +A  L EE     + PD+VT
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFV---KNGKVLEAKELFEEMVRMSIDPDIVT 297

Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
           +S++++       + +  ++FD MV  G   D+  ++ L  G+ +A   +    +   M 
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357

Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
           + G+  N V + T+I G+  A  + +A   + +M   GI+P++ TY  LL G  +  +  
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417

Query: 398 RAEELLQVMEEK 409
           +A  + + M+++
Sbjct: 418 KALVIFEDMQKR 429



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 154/333 (46%), Gaps = 16/333 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L    +  +A  + + +I++   P +ITY+ L+ A  +  +      L  ++ +  +
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + ++++IN       +DEA ++F  M   GC     +YNTLI G+    + E+ +K
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L + MSQ + +  N  TYN L++ +     +++A     +M   GI PD  TYN L    
Sbjct: 352 LFREMSQ-RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              GE  +A  +  +MQ  ++  +  T   ++ G CK G +E+A      +    + P++
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V + +++ G         V+   T M++ G+  +        D   S G +    E+   
Sbjct: 471 VTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN--------DCTLSDGDITLSAELIKK 522

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           M+  G  P     S+L    +++G  +KA S+L
Sbjct: 523 MLSCGYAP-----SLLKD--IKSGVCKKALSLL 548


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 204/411 (49%), Gaps = 4/411 (0%)

Query: 32  YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
           Y TL+A L + ++ +  L L+  +  +G     + +  +I+   +SG++D A  + QKM 
Sbjct: 13  YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72

Query: 92  DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
           D+GC P   TY  LI G     +P ++++ ++ M +    +P+  TYN L+   C  N +
Sbjct: 73  DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLR-SGCEPDLVTYNSLIHGLCMANRM 131

Query: 152 EEAWNVVYK-MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           ++A  V+ + M+ SG  PD VTYNT      + G+  +  +ML EM    + P+  T   
Sbjct: 132 DDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCS 191

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           I+SG CK   ++DA +    M E    P+ + ++ ++         D V++ L  M + G
Sbjct: 192 IISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSG 251

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
                 T++ ++ A   AG +      ++  ++AG   +++  +       R+G+   A+
Sbjct: 252 HYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAK 311

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG-INPNLKTYETLLWG 389
           +IL  M + G  PN++ +  VI G C +  +  A  +  KM + G   P++  + TL+ G
Sbjct: 312 NILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISG 371

Query: 390 YGEAKQPWRAEELLQVMEEKGV-RPKKSTIQLVADSWRAIGLAREAKRVLK 439
           + +A +  +A++LL+ M+ K +  P   T   + D     G  ++AK +L+
Sbjct: 372 FCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLE 422



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/375 (22%), Positives = 176/375 (46%), Gaps = 4/375 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G    A  +   + + G  P ++TYT L+  L + +R    +  + ++ + G +PD
Sbjct: 55  LCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPD 114

Query: 64  SILFNAMINACSESGNVDEAMKIFQK-MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
            + +N++I+    +  +D+A  + Q+ M +SG  P   TYNT I G    GK ++ L++L
Sbjct: 115 LVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEML 174

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
           + M +   + P+  T+  ++   C  N I++A+ V   M+  G  PD++TY+ +    ++
Sbjct: 175 EEMDR-GGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSR 233

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                  E++L  M  +       T   ++    + G++E A     +  E      +  
Sbjct: 234 ANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYT 293

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
            N+ I               L  M E G  P++++++ ++D    +G +    ++   M+
Sbjct: 294 HNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKML 353

Query: 303 KAG-IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH-PNVVMFTTVISGWCNAVK 360
            +G  +PD+  F+ L  G+ +AG   +A+ +L  M+   +  P+VV + T+I G      
Sbjct: 354 DSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGS 413

Query: 361 MQRAMSIYEKMCEIG 375
           +++A  + E+M  +G
Sbjct: 414 LKQAKLLLEEMQAVG 428



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 121/251 (48%), Gaps = 1/251 (0%)

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
           M +   + DA  YNTL     +  +   A ++L  M  N    +  T   ++ G CK G+
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           ++ A   L +M +    PN+V + +LI G    +      + +  M   G +PD+VT+++
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 281 IMDAWSSAGLMGKCQEIFDD-MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
           ++     A  M     +  + M+++G  PD+  ++    G  +AG+  K   +L  M + 
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
           G+ P+VV F ++ISG C A ++  A  +++ M E G  P+  TY  +L     A +    
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTV 240

Query: 400 EELLQVMEEKG 410
           EE+L+ M + G
Sbjct: 241 EEVLEHMVKSG 251



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 3/227 (1%)

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
           ++N+LI G    +      + L +M   G    VVT++T++D    +G +   Q +   M
Sbjct: 12  IYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKM 71

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
             AG  P++  ++ L  G  +A  P  A   +  M + G  P++V + ++I G C A +M
Sbjct: 72  ADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRM 131

Query: 362 QRA-MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
             A + + E M E G  P++ TY T + G  +A +  +  E+L+ M+  G+ P   T   
Sbjct: 132 DDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCS 191

Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPNKKD-EIAVESIHRKQNL 466
           +           +A +V K   E R  +P+     I ++++ R   L
Sbjct: 192 IISGLCKANRIDDAFQVFKGMLE-RGCVPDSLTYSIMLDNLSRANRL 237



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 87/166 (52%), Gaps = 1/166 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L+  G    A + +   +E G    + T+   + AL R  +F    +++  + + G 
Sbjct: 263 IHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGS 322

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSG-CKPTTSTYNTLIKGYGNVGKPEESL 119
            P+ + +N +I+   +SGNVD+A K+ +KM DSG CKP    +NTLI G+   G+  ++ 
Sbjct: 323 LPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQ 382

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
           +LL+ M       P+  TYN ++       S+++A  ++ +M A G
Sbjct: 383 QLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 57/109 (52%)

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           D  +++ L  G  +A +P+ A  +L  M   G   +VV +TT+I G C +  +  A ++ 
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           +KM + G  PN+ TY  L+ G  +A++P  A + ++ M   G  P   T
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVT 117



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 1/145 (0%)

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           D   ++T++     A       E+   M   G +  +  ++ L  G  ++G+   A+++L
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
             M   G  PNVV +T +I G C A +   A+   ++M   G  P+L TY +L+ G   A
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128

Query: 394 KQPWRAEELLQ-VMEEKGVRPKKST 417
            +   A  +LQ +M E G  P   T
Sbjct: 129 NRMDDAGLVLQELMIESGRIPDVVT 153



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 4/104 (3%)

Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
           +  ++ T+I+G C A K + A+ +   M   G + ++ TY TL+ G  ++     A+ LL
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 404 QVMEEKGVRPKKSTIQLVADSW----RAIGLAREAKRVLKSAEE 443
           Q M + G  P   T   + D      R     +  KR+L+S  E
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCE 112


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 200/429 (46%), Gaps = 2/429 (0%)

Query: 6   GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
            +G   E + +   +IE+G   +   +  ++  L R KR+K  + L+  V   G+ PD  
Sbjct: 338 AEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGV-PDVF 396

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            +  +I+   +   + EA+ ++ KMK++G KP+  TY++L+ GY   G+ +E+LKL   M
Sbjct: 397 TYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEM 456

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
             DK   PN+ TY  L++ +  K + + A+ ++ +M  +G+     TYN L         
Sbjct: 457 P-DKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNR 515

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
               ++ML    +    P   T   I++G+ K G M  A     +M++  + PN+V + S
Sbjct: 516 VCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTS 575

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
            I G+      D   K L  +   G++PD+  ++  +D +   G M +       ++K G
Sbjct: 576 FIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDG 635

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + PD+ V++    GY       +A     SM K  V  +  ++TT+I G+     +  A+
Sbjct: 636 LTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFAL 695

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            +Y +M    + P+ KT+  L  G   +     A+ LL  M    V P   T  ++ ++ 
Sbjct: 696 ELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINAC 755

Query: 426 RAIGLAREA 434
              G  +EA
Sbjct: 756 VRDGKLQEA 764



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 190/402 (47%), Gaps = 36/402 (8%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L+ +   P + TY  L+  L + ++    ++L  K+++ G+KP  + +++++    E G 
Sbjct: 386 LVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGR 445

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           +DEA+K++ +M D G  P   TY TL+KGY      + +  LL  M Q+  V   D TYN
Sbjct: 446 MDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQN-GVSCGDYTYN 504

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           IL+      N + E   ++ + ++ G  P  +TYN++   + + G    A  M  +M+  
Sbjct: 505 ILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKK 564

Query: 200 QVRPNERTCGIIVSGYC-----------------------------------KEGNMEDA 224
            + PN  T    + GYC                                   K+GNM  A
Sbjct: 565 GITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRA 624

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
           + FL  + +  + P++ V+NS + G+ ++K      K    M +  V  D   ++T++D 
Sbjct: 625 LHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDG 684

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           +S  G +    E++ +M+   + PD   F+ L  G  R+G+   A+ +L  MR+  V PN
Sbjct: 685 FSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPN 744

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           +V +  +I+      K+Q A  ++++M   G+ P+  TY+ L
Sbjct: 745 IVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 199/430 (46%), Gaps = 3/430 (0%)

Query: 1   MNILVGKGKPHEAHYIFN-CLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG 59
           +++LV  G+  EA  + +  L+  G +  ++  T L+            L L  +V  DG
Sbjct: 262 VDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDG 321

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + P ++ +  +I  C   G  DE  K+ ++M + G   +T  +N +IKG     + ++++
Sbjct: 322 VTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAI 381

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            LL+L+  D  V P+  TY  L+   C    + EA N+  KM  +G++P  VTY++L   
Sbjct: 382 GLLELVV-DTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLG 439

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           Y + G    A ++  EM +    PNE T   ++ GY K+   ++A   L  M++  V   
Sbjct: 440 YCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCG 499

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
              +N LI G   +     VD+ L      G  P  +T+++I++ +  AG+MG    ++ 
Sbjct: 500 DYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYR 559

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            M K GI P+I  ++    GY R      A  +L  +R+ G+ P++  +   I  +C   
Sbjct: 560 QMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQG 619

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
            M RA+     + + G+ P++  Y + + GY   K    A +    M ++ V        
Sbjct: 620 NMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYT 679

Query: 420 LVADSWRAIG 429
            + D +  +G
Sbjct: 680 TLIDGFSKVG 689



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/427 (23%), Positives = 199/427 (46%), Gaps = 7/427 (1%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISK-VEKDGMKPDSILFNAMINACSESGNV 80
           E G  P  +TY+++V  L +  R    L L  + +   G K D +L   +++     G V
Sbjct: 248 EAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEV 307

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
            +A+ +F ++   G  PT  TY  LIKG    G  +E+ KL + M + + +  +   +N+
Sbjct: 308 GKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIE-QGLLLSTYEFNL 366

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           +++        ++A  ++  +V +G+ PD  TY  L     ++ + + A  +  +M+   
Sbjct: 367 VIKGLLRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAG 425

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           V+P+  T   ++ GYC++G M++A++    M +    PN V + +L+KG++  K  D   
Sbjct: 426 VKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAY 485

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
             L  M + GV     T++ +++       + +  E+    +  G  P    ++ +  G+
Sbjct: 486 ALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGF 545

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC--NAVKMQRAMSIYEKMCEIGINP 378
           V+AG    A  +   MRK G+ PN+V +T+ I G+C  N   +   + IY +    GI P
Sbjct: 546 VKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVR--RDGIQP 603

Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           ++  Y   +  + +     RA   L ++ + G+ P  +        ++ + +  EA +  
Sbjct: 604 DIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFY 663

Query: 439 KSAEEDR 445
            S  + R
Sbjct: 664 YSMIKQR 670



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/479 (22%), Positives = 204/479 (42%), Gaps = 71/479 (14%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           ++ ++  G  P   + T L+    R       L+L  ++   G   D+ +++ +I AC  
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
            G   +A+++F +M  +G KP    Y   I G   +   + +L++L  M ++   +P + 
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKM-REAGFEPWEL 256

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKM-VASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           TY+ +V        ++EA  +  +M +A+G + D V    L   Y  +GE  +A  +  E
Sbjct: 257 TYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDE 316

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI-- 253
           + ++ V P   T G+++ G   EG  ++  +   +M E  +  +   FN +IKG L    
Sbjct: 317 VVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKR 376

Query: 254 -KDSDG----------------------------VDKALTL---MEEFGVKPDVVTFSTI 281
            KD+ G                            + +A+ L   M+E GVKP +VT+ ++
Sbjct: 377 WKDAIGLLELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSL 436

Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGV 341
           +  +   G M +  +++ +M   G  P+   ++ L KGY++      A ++L  MR+ GV
Sbjct: 437 LLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGV 496

Query: 342 H-----------------------------------PNVVMFTTVISGWCNAVKMQRAMS 366
                                               P  + + ++I+G+  A  M  A  
Sbjct: 497 SCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFG 556

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           +Y +M + GI PN+ TY + + GY        A +LL  +   G++P  +      D++
Sbjct: 557 MYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTF 615



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/355 (21%), Positives = 163/355 (45%), Gaps = 39/355 (10%)

Query: 2   NILVG---KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           ++L+G   KG+  EA  +++ + ++G  P  +TYTTL+    ++K F +  +L++++ ++
Sbjct: 435 SLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQN 494

Query: 59  GMK-----------------------------------PDSILFNAMINACSESGNVDEA 83
           G+                                    P ++ +N++IN   ++G +  A
Sbjct: 495 GVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSA 554

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
             ++++M+  G  P   TY + I GY      + ++KLL  + +D  ++P+   YN  + 
Sbjct: 555 FGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRD-GIQPDIAAYNAFID 613

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +C + ++  A + +  ++  G+ PD   YN+    Y        A +  + M   +V  
Sbjct: 614 TFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVA 673

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +      ++ G+ K GN+  A+     M    V P+   F +L  G     D DG  + L
Sbjct: 674 DTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLL 733

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
             M    V P++VT++ +++A    G + +  ++ D+M+ +G+ PD   + IL +
Sbjct: 734 DDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDILPR 788


>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 504

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 188/388 (48%), Gaps = 11/388 (2%)

Query: 36  VAALTRQKRFKSILSLISKVEKDGM-KPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           VA L R + ++S++ ++  + +  M KPD   FN +I+A  +S    EA K F  MKD  
Sbjct: 54  VAELRRLRNWRSVILILEWILQGTMFKPDVGCFNMLIDAYGKSKQWREAEKTFHLMKDFQ 113

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND---------RTYNILVRAW 145
           C PT +++N L+  Y    + E++ KL   M ++ N  P            TYN  +   
Sbjct: 114 CLPTETSFNVLLAAYSRGVQLEKAEKLFHEM-KESNYSPGTVEWMIFSGIATYNTYLEVL 172

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
                + +A +    M   GI P   T+  +   Y +   + +A+ +   M+     PN 
Sbjct: 173 GKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNL 232

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   +++ + +EGN   A      ++ +   P++  +N+L++ +   +   G  +    
Sbjct: 233 YTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQA 292

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           M E GV+PD V+++ ++DA+  AGL    Q ++D M +AG +P +    +L   Y +AG+
Sbjct: 293 MVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGK 352

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +AE ++  +   GV P+  MF +++S + N+ ++    S+ E M      P++ T  T
Sbjct: 353 VTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDISTLNT 412

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           L+  Y +     +AEE+   +E KG+ P
Sbjct: 413 LINAYAQGGYIEKAEEVFNSLESKGLTP 440



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/420 (22%), Positives = 195/420 (46%), Gaps = 17/420 (4%)

Query: 1   MNILV---GKGKP-HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
            N+L+   GK K   EA   F+ + +    PT  ++  L+AA +R  + +    L  +++
Sbjct: 86  FNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMK 145

Query: 57  KDGMKPDSI---------LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIK 107
           +    P ++          +N  +    +SG + +A   F+ M+  G  P  +T+  +I 
Sbjct: 146 ESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMIN 205

Query: 108 GYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ 167
            YG     +++  L + M +     PN  TY  L+ A   + +   A  +  ++ + G  
Sbjct: 206 IYGKAYYSDKADDLFRSM-RKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFI 264

Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
           PD  TYN L  AY++      A+++   M    VRP++ +  I++  + + G   DA   
Sbjct: 265 PDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAV 324

Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
              MKE    P +     L+  +         ++ +  +E  GVKPD   F++++ A+ +
Sbjct: 325 YDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGN 384

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
           +G + + + + + MV +  +PDI   + L   Y + G  +KAE +  S+   G+ P+V+ 
Sbjct: 385 SGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMS 444

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           +T+++  +      ++ +SI++KM + G  P+  T +  L      + P + +E+  ++E
Sbjct: 445 WTSLMGAYAQRKLFRKCVSIFQKMVKAGCIPDRATAKVFL---SSCRSPEQVKEVTDMIE 501



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 129/278 (46%), Gaps = 26/278 (9%)

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
            +PD   +N L  AY +  +   AE+    M++ Q  P E +  ++++ Y +   +E A 
Sbjct: 79  FKPDVGCFNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQLEKAE 138

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           +  + MKE    P  V                          E+ +   + T++T ++  
Sbjct: 139 KLFHEMKESNYSPGTV--------------------------EWMIFSGIATYNTYLEVL 172

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
             +G + + ++ F DM K GI P ++ F+I+   Y +A    KA+ +  SMRK    PN+
Sbjct: 173 GKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNL 232

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
             +T +++         RA  I+ ++  +G  P++ TY  LL  Y   + P  A+E+ Q 
Sbjct: 233 YTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQA 292

Query: 406 MEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           M E GVRP + +  ++ D++   GL  +A+ V  S +E
Sbjct: 293 MVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKE 330



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 22/91 (24%), Positives = 45/91 (49%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N     G   +A  +FN L  +G  P ++++T+L+ A  ++K F+  +S+  K+ K G 
Sbjct: 414 INAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCVSIFQKMVKAGC 473

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMK 91
            PD       +++C     V E   + ++ +
Sbjct: 474 IPDRATAKVFLSSCRSPEQVKEVTDMIERHR 504


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 197/393 (50%), Gaps = 4/393 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ ++    P      ++ ++E G  P +  Y  L+    ++   +    + +++ K G+
Sbjct: 195 LDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGL 254

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +P ++ FN +IN   +S N+DE  ++ + M+++   P   TY+ LI G    G+ + + +
Sbjct: 255 RPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQ 314

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M Q + ++PN  T+  L+        ++ A N  ++M+  G++PD V YNTL    
Sbjct: 315 LFDEMQQ-RGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGL 373

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+  +A +++ EM+   ++P++ T   ++ GYCKEG++E AM     M E  V  + 
Sbjct: 374 CKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDN 433

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V F +LI GF         ++ L  M E G+KPD  T++ ++D +   G +    ++  +
Sbjct: 434 VAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKE 493

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G +P +  +++L  G  + G+ + A  +L +M   GV P+ + +  ++ G C   K
Sbjct: 494 MQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGK 553

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
            +  + +     E G+  +   Y +L+  Y ++
Sbjct: 554 AEDLLKLRN---EKGLIVDYAYYTSLVSEYNKS 583



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 196/426 (46%), Gaps = 37/426 (8%)

Query: 34  TLVAALTRQKRFKSILSLISKV-EKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKD 92
           +++  L  +K   S  S+ + + +  G +  + +F+A++ A  +SG V +A++ F+ +++
Sbjct: 122 SIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRN 181

Query: 93  S-------GC----------------------------KPTTSTYNTLIKGYGNVGKPEE 117
           S       GC                             P    YN LI  +   G   +
Sbjct: 182 SNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRD 241

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           + KL+    + + ++P   ++N L+   C   +++E + +   M  + I PD  TY+ L 
Sbjct: 242 A-KLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLI 300

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
               + G    AEQ+  EMQ   +RPN  T   ++ G  +   M+ AM   ++M  + V 
Sbjct: 301 HGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVK 360

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P+LV++N+L+ G   + D +   K +  M+  G+KPD +T++T++D +   G +    EI
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
              M + G+  D   F+ L  G+ R G  + AE  L  M + G+ P+   +T VI G+C 
Sbjct: 421 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCK 480

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              ++    + ++M   G  P + TY  L+ G  +  Q   A  LL+ M   GV P   T
Sbjct: 481 KGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDIT 540

Query: 418 IQLVAD 423
             ++ +
Sbjct: 541 YNILLE 546



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 177/363 (48%), Gaps = 8/363 (2%)

Query: 2   NILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NIL+ K    G   +A  IFN + + G RPT +++ TL+  L + +       L   +E+
Sbjct: 227 NILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEE 286

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
           + + PD   ++ +I+   + G +D A ++F +M+  G +P   T+  LI G     + + 
Sbjct: 287 NRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDS 346

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           ++     M     VKP+   YN L+   C    + +A  +V +M   G++PD +TY TL 
Sbjct: 347 AMNTYHQMLT-MGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLI 405

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
             Y + G+   A ++   M    V  +      ++SG+C++G + DA R L  M E  + 
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMK 465

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P+   +  +I G+    +     K L  M+  G KP V+T++ +M+     G M     +
Sbjct: 466 PDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANML 525

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            + M+  G+ PD   ++IL +G+ + G   KAE +L    + G+  +   +T+++S +  
Sbjct: 526 LEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLLKLRNEKGLIVDYAYYTSLVSEYNK 582

Query: 358 AVK 360
           ++K
Sbjct: 583 SLK 585



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 81/363 (22%), Positives = 175/363 (48%), Gaps = 2/363 (0%)

Query: 81  DEAMKIFQKMKDS-GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           D A  +F  + D+ G + +   ++ L+  Y + G   ++++  +L+ ++ N +       
Sbjct: 134 DSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLV-RNSNFQIPFHGCG 192

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L+    + NS    W    +++  G  P    YN L   + + G    A+ +  E++  
Sbjct: 193 YLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKR 252

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            +RP   +   +++G CK  N+++  R    M+E  ++P++  ++ LI G       D  
Sbjct: 253 GLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVA 312

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
           ++    M++ G++P+ +TF+ ++D    +  M      +  M+  G++PD+ +++ L  G
Sbjct: 313 EQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNG 372

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
             + G+  KA  ++  M+  G+ P+ + +TT+I G+C    ++ AM I + M E G+  +
Sbjct: 373 LCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLD 432

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
              +  L+ G+    +   AE  L+ M E G++P  +T  +V D +   G  +   ++LK
Sbjct: 433 NVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLK 492

Query: 440 SAE 442
             +
Sbjct: 493 EMQ 495



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 136/307 (44%), Gaps = 5/307 (1%)

Query: 141 LVRAWCSKNSIEEAWNVVYKMV-ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           ++R   S+   + A +V   ++  +G +     ++ L  AY   G    A Q    ++N+
Sbjct: 123 IIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNS 182

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
             +     CG ++       +      F   + E    P +  +N LI  F   K+    
Sbjct: 183 NFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKF--CKEGSIR 240

Query: 260 DKALTLME--EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
           D  L   E  + G++P  V+F+T+++    +  + +   +   M +  I PD+  +S+L 
Sbjct: 241 DAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLI 300

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
            G  + G    AE +   M++ G+ PN + FT +I G   + +M  AM+ Y +M  +G+ 
Sbjct: 301 HGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVK 360

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           P+L  Y TLL G  +     +A +L+  M+  G++P K T   + D +   G    A  +
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420

Query: 438 LKSAEED 444
            K   E+
Sbjct: 421 RKGMNEE 427


>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
 gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
          Length = 678

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 209/417 (50%), Gaps = 5/417 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+   + H    ++  ++  G+   + T+  +V AL +  + +  LS+  ++ K G+ P+
Sbjct: 213 LIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPN 272

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMK---DSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            + FN M++   + G++D A+K+ +KM+       KP + TYN+LI G+  +G    + +
Sbjct: 273 VVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEE 332

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L   M +  +++PN RTY  ++  +     +EEA  +  +MV  G+ P++V YN++    
Sbjct: 333 LRNEMMK-IDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWL 391

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G+   A  +  +M + Q+  ++ TC I+  G C+ G +  A++FL ++ E  +  + 
Sbjct: 392 YMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDA 451

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
              N LI       +     + L  M   G+ PDVVTF T++D     G +    +++D 
Sbjct: 452 FSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDK 511

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           MVK   +P++ V++ +  G  + G    A S++  +++ G+  + + + T+I+G+ N  K
Sbjct: 512 MVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMGL-VDTITYNTLINGYFNCGK 570

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
             +A  +   M   GI  +  TY T++    +      A+EL+ +M   GV P   T
Sbjct: 571 FDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPDNIT 627



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/417 (23%), Positives = 191/417 (45%), Gaps = 40/417 (9%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE---KDGMKPDSI 65
           K  EA  +F  +++ G  P ++T+  +V    +       L L+ K+E      +KP+S+
Sbjct: 253 KLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSV 312

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
            +N++I+   + G +  A ++  +M     +P   TY T+I+GY   G  EE+L+L   M
Sbjct: 313 TYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEM 372

Query: 126 SQDKNVKPNDRTYN-----------------------------------ILVRAWCSKNS 150
            + + + PN   YN                                   IL R  C    
Sbjct: 373 VE-RGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGY 431

Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
           I  A   + +++ + +  DA ++N L     +      A Q+L  M    + P+  T G 
Sbjct: 432 ITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGT 491

Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
           ++ G+CKEGN+E A++   +M + E  PNL+V+NS+I G       D     + +++  G
Sbjct: 492 LIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMG 551

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           +  D +T++T+++ + + G   K  ++   M  AGI      ++ + K   + G  Q+A+
Sbjct: 552 L-VDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAK 610

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
            ++T M  +GV P+ + + T++         +  + +++ M   G+ P+  TYE ++
Sbjct: 611 ELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGVVPDKLTYENIV 667



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/433 (23%), Positives = 184/433 (42%), Gaps = 56/433 (12%)

Query: 34  TLVAALTRQKRFKSILSLISKVEK-DGMKPDSIL----------------FNAMINACSE 76
           +++  L   +R+   LSL+  +   +G+ P  +L                F+A++ AC++
Sbjct: 121 SVIHVLVNSRRYDDALSLMGNLMTVNGLSPLEVLEALNNSYGICESNHAVFDALVRACTQ 180

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
            G    A ++ +K++  GC  T   +N  +     V +      + + M        N  
Sbjct: 181 IGATVGACEVIKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFWIVYKEMVS-YGYMENVN 239

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGI------------------------------ 166
           T+N++V A C    ++EA +V Y+++ SGI                              
Sbjct: 240 TFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKM 299

Query: 167 --------QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
                   +P++VTYN+L   + + G    AE++  EM    + PN RT   ++ GY + 
Sbjct: 300 EIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRA 359

Query: 219 GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTF 278
           G +E+A+R    M E  + PN VV+NS++       D DG     T M +  +  D  T 
Sbjct: 360 GCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTC 419

Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
           S +       G +    +  + +++  +  D    +IL     ++     A  +L  M  
Sbjct: 420 SILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYV 479

Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
            G+ P+VV F T+I G C    ++ A+ +Y+KM +    PNL  Y +++ G  +      
Sbjct: 480 RGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDV 539

Query: 399 AEELLQVMEEKGV 411
           A  L+ V++  G+
Sbjct: 540 ARSLVDVLQRMGL 552



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 37/194 (19%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P ++T+ TL+    ++   +S + +  K+ K   KP+ +++N++IN   + G VD A
Sbjct: 481 GLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVA 540

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
             +   ++  G   T  TYNTLI GY N GK +++ KL  LM Q+  +  +  TYN +++
Sbjct: 541 RSLVDVLQRMGLVDTI-TYNTLINGYFNCGKFDKAFKLSTLM-QNAGILASSATYNTVIK 598

Query: 144 AWCSKNSIEEA---------W-----NVVYK---------------------MVASGIQP 168
             C    ++EA         W     N+ Y+                     MV  G+ P
Sbjct: 599 FLCKFGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGVVP 658

Query: 169 DAVTYNTLARAYAQ 182
           D +TY  +     Q
Sbjct: 659 DKLTYENIVSPLLQ 672



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/234 (22%), Positives = 110/234 (47%), Gaps = 7/234 (2%)

Query: 18  NCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSES 77
           N LIE+       ++  L+  L +   F +   L++++   G+ PD + F  +I+   + 
Sbjct: 445 NNLIEDA-----FSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKE 499

Query: 78  GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT 137
           GN++ A++++ KM     KP    YN++I G    G  + +  L+ ++ +   V  +  T
Sbjct: 500 GNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMGLV--DTIT 557

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           YN L+  + +    ++A+ +   M  +GI   + TYNT+ +   ++G    A++++  M 
Sbjct: 558 YNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKELMTMMV 617

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
              V P+  T   +V    K  + E+ +     M    V P+ + + +++   L
Sbjct: 618 LWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGVVPDKLTYENIVSPLL 671


>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
 gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
 gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 205/419 (48%), Gaps = 9/419 (2%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDG-MKPDSILFNAMINACSESGNVDEAM 84
           RPT  TY +++  L ++   + +  L +++  +G   PD++ ++A+I+A  +    D A+
Sbjct: 192 RPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAV 251

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
           ++F +MK++G +PT   Y TL+  Y  +GK EE+L L+  M   + V P   TY  L+R 
Sbjct: 252 RLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCV-PTVYTYTELIRG 310

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
                 +E+A+ V   M+  G +PD V  N L     +      A ++  EM+     PN
Sbjct: 311 LGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPN 370

Query: 205 ERTCGIIV-SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
             T   I+ S +  +    +A  +L RMK+  V P+   ++ LI GF     ++ V+KAL
Sbjct: 371 VVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFC---KTNRVEKAL 427

Query: 264 TLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
            L+EE    G  P    + +++++   A       E+F ++ +      + V++++ K +
Sbjct: 428 LLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHF 487

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            + G   +A  +   M+K G  P+V  +  +I+G   A  M  A S++  M E G NP++
Sbjct: 488 GKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDI 547

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            ++  +L G      P RA E+   M+   ++P   +   V       GL  EA +++K
Sbjct: 548 NSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMK 606



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 200/410 (48%), Gaps = 3/410 (0%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGH-RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMK 61
           +L+ +G   + H ++N +  EGH  P  +TY+ L++A  +  R  S + L  +++++G++
Sbjct: 204 MLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQ 263

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKL 121
           P + ++  ++    + G V+EA+ +  +M+   C PT  TY  LI+G G  G+ E++  +
Sbjct: 264 PTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGV 323

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA-Y 180
            + M +D   KP+    N L+      + ++EA  +  +M      P+ VTYNT+ ++ +
Sbjct: 324 YKNMLKD-GCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLF 382

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
                   A   L  M+ + V P+  T  I++ G+CK   +E A+  L  M E    P  
Sbjct: 383 EDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCP 442

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             + SLI      K  +  ++    ++E      V  ++ ++  +   G   +   +F++
Sbjct: 443 AAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNE 502

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M K G  PD++ ++ L  G VRA    +A S+  +M + G +P++     +++G      
Sbjct: 503 MKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGG 562

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
            +RAM ++ KM    I P+  +Y T+L     A     A +L++ M  KG
Sbjct: 563 PKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKG 612



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 78/383 (20%), Positives = 168/383 (43%), Gaps = 11/383 (2%)

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
           ++  +   + +N + +  TY  L+R       + E W  +  MV S         + + +
Sbjct: 109 IQFFKWAGKKRNFEHDSTTYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVK 168

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM-KELEVH 237
              +     +A  + ++++  + RP   T   ++    +EG+ E        M  E    
Sbjct: 169 ILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCF 228

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P+ V +++LI  F  +   D   +    M+E G++P    ++T+M  +   G + +   +
Sbjct: 229 PDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNL 288

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
             +M      P ++ ++ L +G  ++G  + A  +  +M K G  P+VV+   +I+    
Sbjct: 289 VHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGR 348

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ-PWRAEELLQVMEEKGVRPKKS 416
           + +++ A+ ++E+M  +   PN+ TY T++    E K  P  A   L+ M++ GV P   
Sbjct: 349 SDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSF 408

Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIA--VESIHRKQNLSASNSTFL 474
           T  ++ D +      R  K +L   E D +  P         + S+ + +   A+N  F 
Sbjct: 409 TYSILIDGFCKTN--RVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQ 466

Query: 475 QIPGVVSSEHNGSSAAKIRSQIV 497
           ++      E+ GSS+ ++ + ++
Sbjct: 467 EL-----KENCGSSSVRVYAVMI 484



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 134/285 (47%), Gaps = 2/285 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKS-ILSLISKVEKDG 59
           +NIL    +  EA  +F  +      P ++TY T++ +L   K   S   S + +++KDG
Sbjct: 343 INILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDG 402

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + P S  ++ +I+   ++  V++A+ + ++M + G  P  + Y +LI   G   + E + 
Sbjct: 403 VVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAAN 462

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +L Q + ++     + R Y ++++ +       EA  +  +M   G  PD   YN L   
Sbjct: 463 ELFQELKENCG-SSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITG 521

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
             +      A  +   M+ N   P+  +  II++G  + G  + AM    +MK   + P+
Sbjct: 522 MVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPD 581

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
            V +N+++         +   K +  M   G + D++T+S+I++A
Sbjct: 582 AVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEA 626


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 219/489 (44%), Gaps = 56/489 (11%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   +A  +F+ +   G  P LI Y+ L+  L +  R +    L+      G+K D + 
Sbjct: 320 EGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVG 379

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-QLM 125
           F++ ++A  + G++   ++I+++M + G  P   + + LIKG+   G+  E+  L  Q++
Sbjct: 380 FSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQIL 439

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
                 +P+  TY+ L+  +C   ++ + + +   M+    +PD + Y+ L     + G 
Sbjct: 440 KL--GFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGL 497

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A +  F+  N  + PN  T   ++  +C+   +  AM+  Y M  L +  + V +  
Sbjct: 498 VGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTI 557

Query: 246 LIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAW-----SSAGLMGKCQEI 297
           LIKG         VD+AL L   M +   KPDV+T+ T++D       SSAGL      I
Sbjct: 558 LIKG---AAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLC-----I 609

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG----------------- 340
           FD M K  + PDI ++++L   + R G  + A  +   + + G                 
Sbjct: 610 FDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCN 669

Query: 341 ------------------VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
                             + PN + FT +I  +C   +M  AM ++ KM E G  PNL T
Sbjct: 670 FKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVT 729

Query: 383 YETLLWGYGEAKQPWRAE-ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           Y  L+ GY +++    +  +L   M E  + P   +  ++ D     GL +EA    + A
Sbjct: 730 YSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCA 789

Query: 442 EEDRQSMPN 450
             D+  +P+
Sbjct: 790 -LDKHLLPD 797



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/409 (23%), Positives = 195/409 (47%), Gaps = 2/409 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  EA  +F  +++ G  P+++TY+ L+A   +    +    L   + K   +PD+I++
Sbjct: 426 GRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVY 485

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +IN   + G V +A++ F +  + G  P   T NTL+  +  +     ++K+  LM  
Sbjct: 486 SVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGM 545

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
             N+K +  TY IL++       ++EA  + ++M+    +PD +TY TL     +  ++ 
Sbjct: 546 -LNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSS 604

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
               +   M  N V P+     ++++ + +EG++E A+     + E    P++  FN++I
Sbjct: 605 AGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMI 664

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             + + K  D   +    M    ++P+ +TF+ ++DA+   G M     +F  M++ G E
Sbjct: 665 CCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPE 724

Query: 308 PDIHVFSILAKGYVRA-GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
           P++  +S L  GY ++    +    +   M +  + PN+V ++ +I G C    M+ A  
Sbjct: 725 PNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASC 784

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
            +    +  + P++  Y  L+ GY +  +   A  L   M    + P +
Sbjct: 785 AFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDR 833



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 94/400 (23%), Positives = 174/400 (43%), Gaps = 44/400 (11%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGM--KPDSI--LFNAMINACSESGNVDEAMK 85
           + Y  L+ +  R+  F   + +   V   G+   P+ +  L  ++I++      VD+  +
Sbjct: 168 VVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGE 227

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +   M++       S Y  ++  + N G+ E  L+  + + Q      +  T N +++  
Sbjct: 228 LCSAMREQ----PFSVYEFVMNRFMNKGEVEMGLRFHKALVQG-GFGLDIITCNKILKGI 282

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
             +N I  A +    +V  G +P+ VT++TL  AY + G   +A  +   M  N V P+ 
Sbjct: 283 WMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDL 342

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
               I++ G  K G +ED  R L           LV                 +DK    
Sbjct: 343 IVYSILIDGLFKAGRLEDGQRLL-----------LV----------------ALDK---- 371

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
               G+K DVV FS+ MDA+   G +G+  +I+  M+  GI P++   SIL KG+ + G 
Sbjct: 372 ----GIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGR 427

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
             +A  +   + K G  P+++ ++ +I+G+C +  ++    +YE M +    P+   Y  
Sbjct: 428 ILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSV 487

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           L+ G  +      A         +G+ P   T+  + DS+
Sbjct: 488 LINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSF 527



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 5/205 (2%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G    A  +F  ++E G +P + T+ T++      KR    + L +K+  + ++P++I 
Sbjct: 635 EGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAIT 694

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES-LKLLQLM 125
           F  +I+A    G +D+AM +F KM + G +P   TY+ LI GY       ES LKL   M
Sbjct: 695 FTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEM 754

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
            ++ N+ PN  +Y+IL+   C +  ++EA       +   + PD + Y  L R Y + G 
Sbjct: 755 LEN-NIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGR 813

Query: 186 TYRAEQMLFEMQNNQVRPN---ERT 207
              A  +   M  N++ P+   ERT
Sbjct: 814 LTEAMMLYDNMLLNRLTPDRFLERT 838


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 190/356 (53%), Gaps = 7/356 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  KG  H+A +  + ++  G +   ++Y TL+  L +  + K+ L ++ +++   ++ D
Sbjct: 149 LCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLD 208

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +++N +I+   +   V++A   + +M      PT  TYNTLI G   +G+ ++++ LL 
Sbjct: 209 VVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLH 268

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  + N+ P   T++ILV A+C +  ++EA NV   M+   ++P+ VTYN+L   Y   
Sbjct: 269 KMILE-NINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLV 327

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            E  +AE +   M    V P+  +  I++SG+CK   +++AM+    M   ++ P++V +
Sbjct: 328 NEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTY 387

Query: 244 NSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           NSLI G   +  S  +  AL L   M + G  P+++T+++++DA      + K  E+   
Sbjct: 388 NSLIDG---LCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTK 444

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +    I+P +  ++IL  G  ++G  + A+ +   +   G + +V  + T+I G+C
Sbjct: 445 LKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFC 500



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 188/382 (49%), Gaps = 1/382 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
            G    L+T + L+   ++        S+ S + K G +PD+I    +I      G++ +
Sbjct: 98  NGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHK 157

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+    K+   G +    +Y TLI G   VG+ + +L++L+ +   K V+ +   YN ++
Sbjct: 158 ALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRI-DGKLVRLDVVMYNTII 216

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
              C    + +A++   +MVA  I P  VTYNTL       G+   A  +L +M    + 
Sbjct: 217 DGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENIN 276

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           P   T  I+V  +CKEG +++A      M + +V PN+V +NSL+ G+  + + +  +  
Sbjct: 277 PTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESI 336

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
              M + GV PDV ++S ++  +    ++ +  ++F++M    I PD+  ++ L  G  +
Sbjct: 337 FNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCK 396

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           +G    A  ++  M   G  PN++ + +++   C    + +A+ +  K+ +  I P++ T
Sbjct: 397 SGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCT 456

Query: 383 YETLLWGYGEAKQPWRAEELLQ 404
           Y  L+ G  ++ +   A+++ +
Sbjct: 457 YNILINGLCKSGRLKDAQKVFE 478



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 197/413 (47%), Gaps = 43/413 (10%)

Query: 17  FNCLIEEGH-RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           FN L+ + +  P++I +  ++ +L +   +  ++SL  ++E +G+  + +  + +IN  S
Sbjct: 56  FNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFS 115

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G+   +  +F               N L KGY                      +P+ 
Sbjct: 116 QLGHNSLSFSVFS--------------NILKKGY----------------------EPDA 139

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            T   L++  C K  I +A +   K++A G Q + V+Y TL     + G+T  A +ML  
Sbjct: 140 ITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRR 199

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL---D 252
           +    VR +      I+ G CK+  + DA  F   M    + P +V +N+LI G      
Sbjct: 200 IDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQ 259

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
           +KD+ G+   + L     + P V TFS ++DA+   G + + + +F  M+K  ++P+I  
Sbjct: 260 LKDAIGLLHKMILEN---INPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVT 316

Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
           ++ L  GY    E  KAESI  +M + GV P+V  ++ +ISG+C    +  AM ++E+M 
Sbjct: 317 YNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMH 376

Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
              I P++ TY +L+ G  ++ +   A +L+  M ++G  P   T   + D+ 
Sbjct: 377 CKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDAL 429



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/328 (21%), Positives = 148/328 (45%), Gaps = 2/328 (0%)

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
            L+ Q KN  P+   +  ++ +    N      ++  +M  +GI  + VT + L   ++Q
Sbjct: 58  HLLHQ-KNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQ 116

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
            G    +  +   +      P+  T   ++ G C +G++  A+ F  ++  L    N V 
Sbjct: 117 LGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVS 176

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           + +LI G   +  +    + L  ++   V+ DVV ++TI+D      L+    + + +MV
Sbjct: 177 YRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMV 236

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
              I P +  ++ L  G    G+ + A  +L  M    ++P V  F+ ++  +C   K++
Sbjct: 237 AKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVK 296

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
            A +++  M +  + PN+ TY +L+ GY    +  +AE +   M + GV P   +  ++ 
Sbjct: 297 EAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMI 356

Query: 423 DSWRAIGLAREAKRVLKSAEEDRQSMPN 450
             +  I +  EA ++ +     +Q  P+
Sbjct: 357 SGFCKIKMVDEAMKLFEEMHC-KQIFPD 383



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 1/213 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +GK  EA  +F  ++++  +P ++TY +L+             S+ + + + G+ PD   
Sbjct: 292 EGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHS 351

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           ++ MI+   +   VDEAMK+F++M      P   TYN+LI G    G+   +LKL+  M 
Sbjct: 352 YSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEM- 410

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            D+   PN  TYN L+ A C  + +++A  ++ K+    IQP   TYN L     + G  
Sbjct: 411 HDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRL 470

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEG 219
             A+++  ++  N    +  T   ++ G+CK+G
Sbjct: 471 KDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 198/423 (46%), Gaps = 1/423 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L+   K  EA   F      G  P L TY  L+    R+K+F     L++ + + G 
Sbjct: 121 LNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGF 180

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +  +IN+ +++G + +A+K+F +M + G  P  + YN LI G+   G    + +
Sbjct: 181 SPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASE 240

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + + +  +V PN  +YN+++   C     +E++ + ++M  +    D  TY+TL    
Sbjct: 241 IWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGL 300

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A ++  EM  N V P+      +++GY + G +E+ +  L+++ E E    +
Sbjct: 301 CGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE-LWKVMEKEGCRTV 359

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N LI+G  +    D       L+ E     D +T+  ++      G + K   I ++
Sbjct: 360 VSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEE 419

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
                 + D   +S +  G  R G   +   +L  M K+G  PN  +   VI+G+  A K
Sbjct: 420 AENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASK 479

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           ++ A+  +  M   G  P + TY TL+ G  +A++   A  L++ M  KG +P   T  L
Sbjct: 480 LEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSL 539

Query: 421 VAD 423
           + +
Sbjct: 540 LMN 542



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 96/424 (22%), Positives = 206/424 (48%), Gaps = 8/424 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  E+  I++ + +      L TY+TL+  L           +  ++ ++G+
Sbjct: 262 INGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGV 321

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD +++N M+N    +G ++E +++++ M+  GC+ T  +YN LI+G     K +E++ 
Sbjct: 322 SPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAIS 380

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + +L+ + K+   +  TY +LV   C    + +A +++ +        D   Y+++    
Sbjct: 381 IWELLPE-KDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGL 439

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G       +L +M  +  +PN   C  +++G+ +   +EDA+RF   M      P +
Sbjct: 440 CREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTV 499

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +N+LI G   +  ++   +A  L++E    G KP+++T+S +M+       +     +
Sbjct: 500 VTYNTLING---LSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNL 556

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           +   ++ G +PD+ + +I+  G   +G+ + A  + + M++    PN+V   T++ G+  
Sbjct: 557 WCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYK 616

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
               +RA  I++ + + G  P++ +Y   L G     +   A   L    ++GV P   T
Sbjct: 617 VRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAIT 676

Query: 418 IQLV 421
             ++
Sbjct: 677 WNIL 680



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 192/390 (49%), Gaps = 8/390 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P + +Y  ++  L +  +F     +  +++K+    D   ++ +I+    SGN+D A ++
Sbjct: 253 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRV 312

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT---YNILVR 143
           +++M ++G  P    YNT++ GY   G+ EE L+L ++M      K   RT   YNIL+R
Sbjct: 313 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME-----KEGCRTVVSYNILIR 367

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
                  ++EA ++   +       D++TY  L     + G   +A  +L E +N +   
Sbjct: 368 GLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL 427

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +      +++G C+EG +++    L +M +    PN  V N++I GF+     +   +  
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M   G  P VVT++T+++  S A    +   +  +M+  G +P++  +S+L  G  + 
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
            +   A ++     + G  P+V M   +I G C++ K++ A+ +Y +M +    PNL T+
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            TL+ G+ + +   RA ++   + + G +P
Sbjct: 608 NTLMEGFYKVRDFERASKIWDHILQYGPQP 637



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 104/474 (21%), Positives = 205/474 (43%), Gaps = 41/474 (8%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  + N + E+G  P + +Y TL+ +L +       L L  ++ + G+ PD   +N +I
Sbjct: 167 KAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILI 226

Query: 72  NACSESGNVDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           +   + G++  A +I++++ K     P   +YN +I G    GK +ES ++   M   KN
Sbjct: 227 DGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMK--KN 284

Query: 131 VKPND-RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
            +  D  TY+ L+   C   +++ A  V  +M  +G+ PD V YNT+   Y + G     
Sbjct: 285 ERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEEC 344

Query: 190 EQMLFEMQNNQVR----------------------------PNERTC------GIIVSGY 215
            ++   M+    R                            P +  C      G++V G 
Sbjct: 345 LELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 404

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           CK G +  A+  L   +      +   ++S+I G       D V   L  M + G KP+ 
Sbjct: 405 CKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 464

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
              + +++ +  A  +      F +MV  G  P +  ++ L  G  +A    +A +++  
Sbjct: 465 HVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKE 524

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M   G  PN++ ++ +++G C   K+  A++++ +  E G  P++K +  ++ G   + +
Sbjct: 525 MLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK 584

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMP 449
              A +L   M+++   P   T   + + +  +   R+ +R  K  +   Q  P
Sbjct: 585 VEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKV---RDFERASKIWDHILQYGP 635



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 201/430 (46%), Gaps = 26/430 (6%)

Query: 10  PHEAH--YIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           P  +H  Y+F+ +++    P L+ + + +  L R ++ K               P+ +  
Sbjct: 37  PGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKC--------------PEDVAL 82

Query: 68  NAMINACSESGNVDEAMKIFQKMKD-SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
             +I A +++   D+A+ IFQ+M +  GC+P   +YN+L+       K +E+     L  
Sbjct: 83  -TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFF-LYF 140

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +   + PN +TYNIL++  C K   ++A  ++  M   G  PD  +Y TL  + A+ G  
Sbjct: 141 ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYM 200

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR-MKELEVHPNLVVFNS 245
             A ++  EM    V P+     I++ G+ K+G++ +A     R +K   V+PN+  +N 
Sbjct: 201 SDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNV 260

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           +I G       D   +    M++     D+ T+ST++     +G +     ++ +M + G
Sbjct: 261 MINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENG 320

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + PD+ V++ +  GY+RAG  ++   +   M K G    VV +  +I G     K+  A+
Sbjct: 321 VSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAI 379

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           SI+E + E     +  TY  L+  +G  K  +   + L ++EE      +  +   A S 
Sbjct: 380 SIWELLPEKDCCADSMTYGVLV--HGLCKNGY-LNKALSILEE--AENGRGDLDTFAYSS 434

Query: 426 RAIGLAREAK 435
              GL RE +
Sbjct: 435 MINGLCREGR 444



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 146/321 (45%), Gaps = 1/321 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L    K  EA  I+  L E+      +TY  LV  L +       LS++ + E      D
Sbjct: 369 LFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD 428

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +  +++MIN     G +DE   +  +M   GCKP     N +I G+    K E++L+   
Sbjct: 429 TFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFG 488

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M   K   P   TYN L+          EA+ +V +M+  G +P+ +TY+ L     Q 
Sbjct: 489 NMVS-KGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +   A  +  +      +P+ +   II+ G C  G +EDA++    MK+ +  PNLV  
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N+L++GF  ++D +   K    + ++G +PD+++++  +    S   +       +D V 
Sbjct: 608 NTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVD 667

Query: 304 AGIEPDIHVFSILAKGYVRAG 324
            G+ P    ++IL +  +  G
Sbjct: 668 RGVLPTAITWNILVRAVLDNG 688



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 114/529 (21%), Positives = 230/529 (43%), Gaps = 21/529 (3%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEK-DGMKPDSILFNAMINACSESGNVDEAMK 85
           P  ++   ++  L  +K   S LS+   V +  G      +F+ ++    +   V    +
Sbjct: 5   PKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSR 64

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           I + ++   CK       T+IK Y     P+++L + Q M +    +P  R+YN L+ A 
Sbjct: 65  IVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNAL 124

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
              N  +EA +        G+ P+  TYN L +   +  +  +A+++L  M      P+ 
Sbjct: 125 IESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDV 184

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL---DIKDSDGVDKA 262
            + G +++   K G M DA++    M E  V P++  +N LI GF    DI ++  + + 
Sbjct: 185 FSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWE- 243

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
             L++   V P++ +++ +++     G   +  EI+  M K     D++ +S L  G   
Sbjct: 244 -RLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCG 302

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           +G    A  +   M + GV P+VV++ T+++G+  A +++  + +++ M + G    + +
Sbjct: 303 SGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVS 361

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           Y  L+ G  E  +   A  + +++ EK       T  ++       G   +A  +L+ AE
Sbjct: 362 YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 421

Query: 443 EDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVS--SEHNGSSAAKIRSQIV--- 497
             R  +        +  + R+  L        ++ GV+   ++H       + + ++   
Sbjct: 422 NGRGDLDTFAYSSMINGLCREGRLD-------EVAGVLDQMTKHGCKPNPHVCNAVINGF 474

Query: 498 LRSDTVWTATKSLFVNTYGSGVQPMVVCRKQC-SQVGTCGQFVNAYRLV 545
           +R+  +  A +  F N    G  P VV      + +    +F  AY LV
Sbjct: 475 VRASKLEDALR-FFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALV 522


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/399 (24%), Positives = 199/399 (49%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK  EA  + + +   G  P +++Y  ++    RQK       + S + + G+KP+
Sbjct: 453 LCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPN 512

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +  ++ +I+ C  + +   A+++   M  S  +     Y T+I G   VG+  ++ +LL 
Sbjct: 513 NYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLA 572

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M ++K +  +  +YN ++  +  +  ++ A     +M  +GI P+ +TY +L     + 
Sbjct: 573 NMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKN 632

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
               +A +M  EM+N  V+ +    G ++ G+CK  NME A      + E  ++P+  ++
Sbjct: 633 NRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIY 692

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           NSLI GF ++ +          M + G++ D+ T++T++D     G +    E++ +M  
Sbjct: 693 NSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQA 752

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+ PD  +++++  G  + G+  K   +   M+K  V PNV+++  VI+G      +  
Sbjct: 753 VGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDE 812

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           A  ++++M + GI P+  T++ L+ G     QP RA  L
Sbjct: 813 AFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/440 (22%), Positives = 212/440 (48%), Gaps = 14/440 (3%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           V +G   +A  + + ++ +G    ++  T+L+    +     S L L  K+EK+G  P+S
Sbjct: 315 VKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNS 374

Query: 65  ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           + F+ +I    ++G +++A++ ++KM+  G  P+    +T+I+G+    K EE+LKL   
Sbjct: 375 VTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLF-- 432

Query: 125 MSQDKNVK---PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
              D++ +    N    N ++   C +   +EA  ++ KM + GI P+ V+YN +   + 
Sbjct: 433 ---DESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHC 489

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           +      A  +   +    ++PN  T  I++ G  +  + ++A+  +  M    +  N V
Sbjct: 490 RQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGV 549

Query: 242 VFNSLIKGFLDIKDSDGVDKALT-LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V+ ++I G   +  +    + L  ++EE  +    +++++I+D +   G M      +++
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEE 609

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   GI P++  ++ L  G  +     +A  +   M+  GV  ++  +  +I G+C    
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN 669

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+ A +++ ++ E G+NP+   Y +L+ G+        A +L + M + G+R    T   
Sbjct: 670 MESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTT 729

Query: 421 VADSWRAIGLAREAKRVLKS 440
           + D     GL ++   +L S
Sbjct: 730 LID-----GLLKDGNLILAS 744



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 95/418 (22%), Positives = 197/418 (47%), Gaps = 6/418 (1%)

Query: 7   KGKPHE-AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
           KG+ HE A  +F+   E G     +   T+++ L +Q +      L+SK+E  G+ P+ +
Sbjct: 421 KGQKHEEALKLFDESFETGLANVFVC-NTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479

Query: 66  LFN-AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
            +N  M+  C +  N+D A  +F  + + G KP   TY+ LI G       + +L+++  
Sbjct: 480 SYNNVMLGHCRQK-NMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNH 538

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG-IQPDAVTYNTLARAYAQY 183
           M+   N++ N   Y  ++   C      +A  ++  M+    +    ++YN++   + + 
Sbjct: 539 MTS-SNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKE 597

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           GE   A     EM  N + PN  T   +++G CK   M+ A+     MK   V  ++  +
Sbjct: 598 GEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAY 657

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
            +LI GF    + +      + + E G+ P    +++++  + + G M    +++  M+K
Sbjct: 658 GALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLK 717

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            G+  D+  ++ L  G ++ G    A  + T M+  G+ P+ +++T +++G     +  +
Sbjct: 718 DGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVK 777

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
            + ++E+M +  + PN+  Y  ++ G+        A  L   M +KG+ P  +T  ++
Sbjct: 778 VVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDIL 835



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/449 (23%), Positives = 212/449 (47%), Gaps = 39/449 (8%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ LV +    EA  +++ ++  G     +T   L+ A  R+++    L ++S+  + G 
Sbjct: 205 LSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGA 264

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSG-CKPTTSTYNTLIKGYGNVGKPEESL 119
           +PDS+L++  + AC ++ ++  A  + ++MK+   C P+  TY ++I      G  ++++
Sbjct: 265 EPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAI 324

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +L   M  D  +  N      L+   C  N +  A  +  KM   G  P++VT++ L   
Sbjct: 325 RLKDEMLSD-GISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEW 383

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + + GE  +A +   +M+   + P+      I+ G+ K    E+A++      E  +  N
Sbjct: 384 FRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-AN 442

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           + V N+++        +D   + L+ ME  G+ P+VV+++ +M        M   + +F 
Sbjct: 443 VFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFS 502

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC--- 356
           ++++ G++P+ + +SIL  G  R  + Q A  ++  M    +  N V++ T+I+G C   
Sbjct: 503 NILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVG 562

Query: 357 -------------------------NAV--------KMQRAMSIYEKMCEIGINPNLKTY 383
                                    N++        +M  A++ YE+MC  GI+PN+ TY
Sbjct: 563 QTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITY 622

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
            +L+ G  +  +  +A E+   M+ KGV+
Sbjct: 623 TSLMNGLCKNNRMDQALEMRDEMKNKGVK 651



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 179/378 (47%), Gaps = 11/378 (2%)

Query: 51  LISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG 110
           L+   +  G + +S  FN ++NA S+    D A+ I  +M +    P     N  +    
Sbjct: 150 LVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALV 209

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
                 E+ +L   M     V  ++ T  +L+RA   +    EA  V+ + +  G +PD+
Sbjct: 210 QRNSLTEAKELYSRMVA-IGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQV-RPNERTCGIIVSGYCKEGNMEDAMRFLY 229
           + Y+   +A  +  +   A  +L EM+  ++  P++ T   ++    K+GNM+DA+R   
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328

Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWS 286
            M    +  N+V   SLI G    K++D V  AL L   ME+ G  P+ VTFS +++ + 
Sbjct: 329 EMLSDGISMNVVAATSLITGH--CKNNDLV-SALVLFDKMEKEGPSPNSVTFSVLIEWFR 385

Query: 287 SAGLMGKCQEIFDDMVKAGIEPDI-HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
             G M K  E +  M   G+ P + HV +I+ +G+++  + ++A  +     + G+  NV
Sbjct: 386 KNGEMEKALEFYKKMEVLGLTPSVFHVHTII-QGWLKGQKHEEALKLFDESFETGL-ANV 443

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
            +  T++S  C   K   A  +  KM   GI PN+ +Y  ++ G+   K    A  +   
Sbjct: 444 FVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSN 503

Query: 406 MEEKGVRPKKSTIQLVAD 423
           + EKG++P   T  ++ D
Sbjct: 504 ILEKGLKPNNYTYSILID 521



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 109/249 (43%), Gaps = 36/249 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L    +  +A  + + +  +G +  +  Y  L+    ++   +S  +L S++ ++G+
Sbjct: 626 MNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL 685

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P   ++N++I+     GN+  A+ +++KM   G +    TY TLI G            
Sbjct: 686 NPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDG------------ 733

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               + +D N+      Y                     +M A G+ PD + Y  +    
Sbjct: 734 ----LLKDGNLILASELYT--------------------EMQAVGLVPDEIIYTVIVNGL 769

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++ G+  +  +M  EM+ N V PN      +++G+ +EGN+++A R    M +  + P+ 
Sbjct: 770 SKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDG 829

Query: 241 VVFNSLIKG 249
             F+ L+ G
Sbjct: 830 ATFDILVSG 838



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 1/240 (0%)

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N R    +++ Y K+   + A+  + +M EL+V P     N  +   +         +  
Sbjct: 162 NSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELY 221

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           + M   GV  D VT   +M A        +  E+    ++ G EPD  ++S+  +   + 
Sbjct: 222 SRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKT 281

Query: 324 GEPQKAESILTSMR-KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
            +   A S+L  M+ K    P+   +T+VI        M  A+ + ++M   GI+ N+  
Sbjct: 282 LDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVA 341

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
             +L+ G+ +      A  L   ME++G  P   T  ++ + +R  G   +A    K  E
Sbjct: 342 ATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKME 401


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 186/383 (48%), Gaps = 2/383 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A+ +F  L  +G  PT+ TY  ++ A  ++ +F+++  L+ ++++ G+     +F
Sbjct: 251 GDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIF 310

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I+A  + G   EA    + M +SGC+P  +TYNTLI G  + GK  E+ +LL+  + 
Sbjct: 311 NGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLE-HAI 369

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + + PN  +Y  L+ A+        A  ++ +M   G   D + Y  L       GE  
Sbjct: 370 RRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVD 429

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  +  +M    + P+     +++SG CK+G    A + L  M +  V P+  V  +L+
Sbjct: 430 VALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLV 489

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            GF+   + D   K   L  E G+   VV  + ++  +   G+M      F  M      
Sbjct: 490 DGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHS 549

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           PD   +S +  GYV+  + + A  +   M K    PNVV FT++I+G+C    + RA  +
Sbjct: 550 PDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKV 609

Query: 368 YEKMCEIGINPNLKTYETLLWGY 390
           +E+M   G  PN+ TY T+L GY
Sbjct: 610 FEEMRSFGFEPNVVTY-TILIGY 631



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 206/412 (50%), Gaps = 10/412 (2%)

Query: 33  TTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKD 92
           ++L+  L R + FK I +L+  ++   + P     + +I+A + SG V EA++++  + D
Sbjct: 100 SSLLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVID 159

Query: 93  -SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
              C P     N+L+    + GK E + K+   M  D+N   ++ T  I+ +  C +  +
Sbjct: 160 VHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMV-DRNGDVDNYTVCIVTKGLCKEGKV 218

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           EE  +++ K    G  P+ V YNTL   Y + G+  RA  +  E++     P  +T G +
Sbjct: 219 EEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAM 278

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD----KALTLME 267
           ++ +CK+G  E   + L  MKE  +  +L +FN    G +D +   G +     A+  M 
Sbjct: 279 INAFCKKGKFEAVDKLLVEMKERGLAVSLQIFN----GIIDARFKHGCEIEAADAVRWMI 334

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
           E G +PD+ T++T+++   S G + + +E+ +  ++ G+ P+   ++ L   + + GE  
Sbjct: 335 ESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYV 394

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
           +A  +L  M + G   +++ +  ++ G   A ++  A+++ +KM E GI P+   Y  L+
Sbjct: 395 RASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLM 454

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
            G  +  +   A++LL  M ++ V P       + D +   G   EAK++ +
Sbjct: 455 SGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQ 506



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 204/442 (46%), Gaps = 7/442 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N+LV  GK   A  +++ +++        T   +   L ++ + +    LI K    G 
Sbjct: 174 LNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGC 233

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + +N +I+   ++G+++ A  +F+++K  G  PT  TY  +I  +   GK E   K
Sbjct: 234 VPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDK 293

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M +++ +  + + +N ++ A        EA + V  M+ SG +PD  TYNTL    
Sbjct: 294 LLVEM-KERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGS 352

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G+   AE++L       + PN+ +   ++  + K G    A   L  M E     +L
Sbjct: 353 CSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDL 412

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           + + +L+ G +   +   VD ALT+   M E G+ PD   ++ +M      G     +++
Sbjct: 413 IAYGALVHGLVVAGE---VDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQL 469

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
             +M+   + PD  V + L  G++R G   +A+ +     + G+  +VV    +I G+C 
Sbjct: 470 LVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCK 529

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
              M  A+  +++M     +P+  TY T++ GY +      A  +  +M +K  +P   T
Sbjct: 530 YGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVT 589

Query: 418 IQLVADSWRAIGLAREAKRVLK 439
              + + +   G    A++V +
Sbjct: 590 FTSLINGFCRNGDLNRAEKVFE 611



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 175/400 (43%), Gaps = 24/400 (6%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KGK  EA  +    I  G  P   +YT L+ A ++   +     L+ ++ + G   D I 
Sbjct: 355 KGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIA 414

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           + A+++    +G VD A+ +  KM + G  P  + YN L+ G    G+   + +LL  M 
Sbjct: 415 YGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEM- 473

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            D+NV P+      LV  +    +++EA  +    +  GI    V  N + + Y +YG  
Sbjct: 474 LDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMM 533

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A      M N    P+E T   I+ GY K+ ++  A+R    M +    PN+V F SL
Sbjct: 534 NDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSL 593

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I GF    D +  +K    M  FG +P+VVT++ ++  +   G + K    F+ M+    
Sbjct: 594 INGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKC 653

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM--FTTVIS-GW-------- 355
            P+   F+ L  G            I  S ++    PN+ +  F  +IS GW        
Sbjct: 654 IPNDATFNYLVNGLT------NNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYN 707

Query: 356 ------CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
                 C    ++ A+ +++KM   G  P+  ++  LL G
Sbjct: 708 SILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHG 747



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 12/227 (5%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G  ++A   F  +    H P   TY+T++    +Q   +  L +   + K   KP+ + F
Sbjct: 531 GMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTF 590

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            ++IN    +G+++ A K+F++M+  G +P   TY  LI  +   GK  ++    + M  
Sbjct: 591 TSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLI 650

Query: 128 DKNVKPNDRTYNILVRAWCSKNSI-------EEAWNVVYK----MVASGIQPDAVTYNTL 176
           +K + PND T+N LV    + N I           N+  +    M++ G       YN++
Sbjct: 651 NKCI-PNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSI 709

Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED 223
                Q+     A Q+  +M +    P+  +   ++ G C EG ++D
Sbjct: 710 LLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQD 756


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 198/423 (46%), Gaps = 1/423 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L+   K  EA   F      G  P L TY  L+    R+K+F     L++ + + G 
Sbjct: 121 LNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGF 180

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +  +IN+ +++G + +A+K+F +M + G  P  + YN LI G+   G    + +
Sbjct: 181 SPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASE 240

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + + +  +V PN  +YN+++   C     +E++ + ++M  +    D  TY+TL    
Sbjct: 241 IWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGL 300

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A ++  EM  N V P+      +++GY + G +E+ +  L+++ E E    +
Sbjct: 301 CGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE-LWKVMEKEGCRTV 359

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N LI+G  +    D       L+ E     D +T+  ++      G + K   I ++
Sbjct: 360 VSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEE 419

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
                 + D   +S +  G  R G   +   +L  M K+G  PN  +   VI+G+  A K
Sbjct: 420 AENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASK 479

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           ++ A+  +  M   G  P + TY TL+ G  +A++   A  L++ M  KG +P   T  L
Sbjct: 480 LEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSL 539

Query: 421 VAD 423
           + +
Sbjct: 540 LMN 542



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 187/379 (49%), Gaps = 8/379 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P + +Y  ++  L +  +F     +  +++K+    D   ++ +I+    SGN+D A ++
Sbjct: 253 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRV 312

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT---YNILVR 143
           +++M ++G  P    YNT++ GY   G+ EE L+L ++M      K   RT   YNIL+R
Sbjct: 313 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME-----KEGCRTVVSYNILIR 367

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
                  ++EA ++   +       D++TY  L     + G   +A  +L E +N +   
Sbjct: 368 GLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL 427

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +      +++G C+EG +++    L +M +    PN  V N++I GF+     +   +  
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M   G  P VVT++T+++  S A    +   +  +M+  G +P++  +S+L  G  + 
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
            +   A ++     + G  P+V M   +I G C++ K++ A+ +Y +M +    PNL T+
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607

Query: 384 ETLLWGYGEAKQPWRAEEL 402
            TL+ G+ + +   RA ++
Sbjct: 608 NTLMEGFYKVRDFERASKI 626



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/374 (22%), Positives = 186/374 (49%), Gaps = 8/374 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  E+  I++ + +      L TY+TL+  L           +  ++ ++G+
Sbjct: 262 INGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGV 321

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD +++N M+N    +G ++E +++++ M+  GC+ T  +YN LI+G     K +E++ 
Sbjct: 322 SPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAIS 380

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + +L+ + K+   +  TY +LV   C    + +A +++ +        D   Y+++    
Sbjct: 381 IWELLPE-KDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGL 439

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G       +L +M  +  +PN   C  +++G+ +   +EDA+RF   M      P +
Sbjct: 440 CREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTV 499

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +N+LI G   +  ++   +A  L++E    G KP+++T+S +M+       +     +
Sbjct: 500 VTYNTLING---LSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNL 556

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           +   ++ G +PD+ + +I+  G   +G+ + A  + + M++    PN+V   T++ G+  
Sbjct: 557 WCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYK 616

Query: 358 AVKMQRAMSIYEKM 371
               +RA  I++ +
Sbjct: 617 VRDFERASKIWDHI 630



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 104/472 (22%), Positives = 205/472 (43%), Gaps = 41/472 (8%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A  + N + E+G  P + +Y TL+ +L +       L L  ++ + G+ PD   +N +I
Sbjct: 167 KAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILI 226

Query: 72  NACSESGNVDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           +   + G++  A +I++++ K     P   +YN +I G    GK +ES ++   M   KN
Sbjct: 227 DGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMK--KN 284

Query: 131 VKPND-RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
            +  D  TY+ L+   C   +++ A  V  +M  +G+ PD V YNT+   Y + G     
Sbjct: 285 ERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEEC 344

Query: 190 EQMLFEMQNNQVR----------------------------PNERTC------GIIVSGY 215
            ++   M+    R                            P +  C      G++V G 
Sbjct: 345 LELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 404

Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
           CK G +  A+  L   +      +   ++S+I G       D V   L  M + G KP+ 
Sbjct: 405 CKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 464

Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
              + +++ +  A  +      F +MV  G  P +  ++ L  G  +A    +A +++  
Sbjct: 465 HVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKE 524

Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
           M   G  PN++ ++ +++G C   K+  A++++ +  E G  P++K +  ++ G   + +
Sbjct: 525 MLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK 584

Query: 396 PWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS 447
              A +L   M+++   P   T   + + +  +   R+ +R  K  +   QS
Sbjct: 585 VEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKV---RDFERASKIWDHILQS 633



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 201/430 (46%), Gaps = 26/430 (6%)

Query: 10  PHEAH--YIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           P  +H  Y+F+ +++    P L+ + + +  L R ++ K               P+ +  
Sbjct: 37  PGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKC--------------PEDVAL 82

Query: 68  NAMINACSESGNVDEAMKIFQKMKD-SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
             +I A +++   D+A+ IFQ+M +  GC+P   +YN+L+       K +E+     L  
Sbjct: 83  -TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFF-LYF 140

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           +   + PN +TYNIL++  C K   ++A  ++  M   G  PD  +Y TL  + A+ G  
Sbjct: 141 ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYM 200

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR-MKELEVHPNLVVFNS 245
             A ++  EM    V P+     I++ G+ K+G++ +A     R +K   V+PN+  +N 
Sbjct: 201 SDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNV 260

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           +I G       D   +    M++     D+ T+ST++     +G +     ++ +M + G
Sbjct: 261 MINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENG 320

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           + PD+ V++ +  GY+RAG  ++   +   M K G    VV +  +I G     K+  A+
Sbjct: 321 VSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAI 379

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           SI+E + E     +  TY  L+  +G  K  +   + L ++EE      +  +   A S 
Sbjct: 380 SIWELLPEKDCCADSMTYGVLV--HGLCKNGY-LNKALSILEE--AENGRGDLDTFAYSS 434

Query: 426 RAIGLAREAK 435
              GL RE +
Sbjct: 435 MINGLCREGR 444



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/529 (21%), Positives = 230/529 (43%), Gaps = 21/529 (3%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEK-DGMKPDSILFNAMINACSESGNVDEAMK 85
           P  ++   ++  L  +K   S LS+   V +  G      +F+ ++    +   V    +
Sbjct: 5   PKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSR 64

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           I + ++   CK       T+IK Y     P+++L + Q M +    +P  R+YN L+ A 
Sbjct: 65  IVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNAL 124

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
              N  +EA +        G+ P+  TYN L +   +  +  +A+++L  M      P+ 
Sbjct: 125 IESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDV 184

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL---DIKDSDGVDKA 262
            + G +++   K G M DA++    M E  V P++  +N LI GF    DI ++  + + 
Sbjct: 185 FSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWE- 243

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
             L++   V P++ +++ +++     G   +  EI+  M K     D++ +S L  G   
Sbjct: 244 -RLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCG 302

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           +G    A  +   M + GV P+VV++ T+++G+  A +++  + +++ M + G    + +
Sbjct: 303 SGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVS 361

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           Y  L+ G  E  +   A  + +++ EK       T  ++       G   +A  +L+ AE
Sbjct: 362 YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 421

Query: 443 EDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVS--SEHNGSSAAKIRSQIV--- 497
             R  +        +  + R+  L        ++ GV+   ++H       + + ++   
Sbjct: 422 NGRGDLDTFAYSSMINGLCREGRLD-------EVAGVLDQMTKHGCKPNPHVCNAVINGF 474

Query: 498 LRSDTVWTATKSLFVNTYGSGVQPMVVCRKQC-SQVGTCGQFVNAYRLV 545
           +R+  +  A +  F N    G  P VV      + +    +F  AY LV
Sbjct: 475 VRASKLEDALR-FFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALV 522



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 143/338 (42%), Gaps = 41/338 (12%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G G    A  ++  + E G  P ++ Y T++    R  R +  L L   +EK+G +  
Sbjct: 300 LCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT- 358

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + +N +I    E+  VDEA+ I++ + +  C   + TY  L+ G    G   ++L +L+
Sbjct: 359 VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE 418

Query: 124 LMSQDKN----------------------------------VKPNDRTYNILVRAWCSKN 149
                +                                    KPN    N ++  +   +
Sbjct: 419 EAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRAS 478

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            +E+A      MV+ G  P  VTYNTL    ++      A  ++ EM +   +PN  T  
Sbjct: 479 KLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYS 538

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF 269
           ++++G C+   ++ A+    +  E    P++ + N +I G      S  V+ AL L  E 
Sbjct: 539 LLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLC---SSGKVEDALQLYSEM 595

Query: 270 GVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
             +   P++VT +T+M+ +       +  +I+D ++++
Sbjct: 596 KQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQS 633


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/479 (24%), Positives = 211/479 (44%), Gaps = 63/479 (13%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P++  Y  L+ + T++ R   +  L   +   G+ P++  FN +I    +SG +D+A ++
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F KM + GC+P   ++  L++GY   G   + L+LL  M +     PN   YN L+ ++C
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRR-LGFSPNKVVYNTLISSFC 137

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV----R 202
            +   ++A  +V +M   G+ PD VT+N    A    G+   A ++  +MQ ++V    +
Sbjct: 138 KEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQ 197

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           PN  T  +++ G+CKEG +E+A     +MK  E   N   +N  + G + I         
Sbjct: 198 PNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLV 257

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           L  M + G++P+V +++ +MD     G++   + +   M  +G+ PD   ++ L  GY  
Sbjct: 258 LKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCH 317

Query: 323 AGEPQKAESILTSMRKYGVHPN-----------------------------------VVM 347
            G+  +A ++L  M + G  PN                                    V 
Sbjct: 318 TGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVT 377

Query: 348 FTTVISGWCNAVKMQRAMSIYEKM-------------CEIGI----------NPNLKTYE 384
              VI G CN  K+ +A+ I   M               IG+           P+L +Y 
Sbjct: 378 CNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYS 437

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           T++ G  +A +   A++    M  K ++P  +   +   S+   G    A RVLK  E+
Sbjct: 438 TIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEK 496



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/466 (23%), Positives = 206/466 (44%), Gaps = 67/466 (14%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P  + Y TL+++  ++ +      L+ ++ KDG+ PD + FNA I+A   SG V EA
Sbjct: 121 GFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEA 180

Query: 84  MKIFQKMKDSGC----KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV-------- 131
            +IF+ M+        +P   TYN ++ G+   G  EE+  L + M   +N+        
Sbjct: 181 SRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNI 240

Query: 132 --------------------------KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
                                     +PN  +YNI++   C    + +A  ++  M +SG
Sbjct: 241 WLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSG 300

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
           + PD VTY TL   Y   G+   A  +L EM  +   PN  TC I++    KEG + +A 
Sbjct: 301 VLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAE 360

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK------------- 272
             L +M E     + V  N +I G  +   +  +DKA+ ++                   
Sbjct: 361 ELLQKMNEKGYVIDTVTCNIVIDGLCN---NGKLDKAIEIVNGMWTHGSAALGNLGNSYI 417

Query: 273 -------------PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
                        PD++++STI+     AG +G+ ++ F +M+   ++PD  ++ +    
Sbjct: 418 GLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHS 477

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           + + G+   A  +L  M K G +  +  + ++I G  +  ++     + ++M E G++P+
Sbjct: 478 FCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPD 537

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           +  Y  +L    E  +   A  +L  M +KG+ P  S+  ++  ++
Sbjct: 538 VSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAF 583



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 161/341 (47%), Gaps = 4/341 (1%)

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P+   YN+L+R+   +  ++    +   MVASG+ P+  T+N L       G    A ++
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
             +M      PNE + GI+V GYC+ G     +  L  M+ L   PN VV+N+LI  F  
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM----VKAGIEP 308
              +D  +K +  M + G+ PDVVTF+  + A  S+G + +   IF DM    V    +P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
           +I  ++++  G+ + G  ++A ++   M+      N   +   + G     K+  A  + 
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
           ++M ++G+ PN+ +Y  ++ G  +    + A  L+++M   GV P   T   +   +   
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318

Query: 429 GLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSAS 469
           G   EA  VL+    D  S  N    I + S+ ++  +S +
Sbjct: 319 GKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEA 359



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/462 (21%), Positives = 187/462 (40%), Gaps = 58/462 (12%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           LV  GK  EA  +   +++ G  P + +Y  ++  L +         L+  +   G+ PD
Sbjct: 245 LVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPD 304

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           ++ +  +++    +G V EA  + ++M   GC P   T N L+      G+  E+ +LLQ
Sbjct: 305 TVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQ 364

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG------------------ 165
            M++ K    +  T NI++   C+   +++A  +V  M   G                  
Sbjct: 365 KMNE-KGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDS 423

Query: 166 -----IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
                  PD ++Y+T+     + G    A++   EM    ++P+     + +  +CKEG 
Sbjct: 424 DSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGK 483

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
           +  A R L  M++   +  L  +NSLI G         +   +  M E GV PDV  ++ 
Sbjct: 484 ISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNN 543

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA----------------- 323
           ++ +    G +     + D+M++ GI P+I  FSIL K + +A                 
Sbjct: 544 VLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVC 603

Query: 324 -----------------GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
                            GE  KA+ +  +           ++  +I   C   K+  A  
Sbjct: 604 GHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASG 663

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           I  K+ + G   +  ++  ++ G G+      A+EL + M E
Sbjct: 664 ILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMME 705


>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
 gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 225/470 (47%), Gaps = 19/470 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +LV + +   A   ++ +I +G      TY+  ++ L + K F  I  L+  +++ G 
Sbjct: 51  IGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGY 110

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +N  +N       +D A+ + Q M + G +P   TY  +I G    G+ + +++
Sbjct: 111 VPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVE 170

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + M + K   P+++    LV   C    ++ A+ +    +   I+     YN+L   +
Sbjct: 171 IWRNMVR-KGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGF 229

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G   +A+ ++  M+ N   P+  T  ++++  C E  +E+A   + +M+   V P++
Sbjct: 230 CQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDV 289

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLM----EEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
             +N L+KG      ++ +DKA  +M    E  G+  DVV+++TI+ A  +A    +  +
Sbjct: 290 YSYNELLKGLCK---ANRLDKAYMMMVNKMEAKGL-CDVVSYNTIIKALCTASHTKRAYK 345

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F++M   GI PD+  F+IL K ++R G    A+ +L  M   G+ P+ V++TT++   C
Sbjct: 346 LFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLC 405

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
              KM  A S++  M E GI P++ +Y  L+ G   A +   A  L + M   G  P + 
Sbjct: 406 KTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEV 465

Query: 417 TIQLVADSWRAIGLAREAK-----RVLKSAEEDRQSMPNKKDEIAVESIH 461
           T +L+       GL  E K     RV     E   ++     E  V +IH
Sbjct: 466 TFKLIIG-----GLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVNAIH 510



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/392 (24%), Positives = 171/392 (43%), Gaps = 36/392 (9%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKP----------------------------- 97
           + A I++  ++G +D+A+K F +M  S C+                              
Sbjct: 12  YRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMI 71

Query: 98  ------TTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
                  + TY+  I G   V       KLL+ M +   V P+   YNI +   C +N +
Sbjct: 72  PQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYV-PDIWAYNIYLNLLCCENQL 130

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           + A  VV  MV  G +PD VTY  +     + G    A ++   M      P+E+ C  +
Sbjct: 131 DVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRAL 190

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           V G C +G ++ A           +  +  ++NSLI GF      D     ++ M   G 
Sbjct: 191 VLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGC 250

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
           +PD+VT++ +++      L+ + + +   M ++G+EPD++ ++ L KG  +A    KA  
Sbjct: 251 EPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYM 310

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           ++ +  +     +VV + T+I   C A   +RA  ++E+M   GI P++ T+  L+  + 
Sbjct: 311 MMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFL 370

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
                  A++LL  M   G+ P +     + D
Sbjct: 371 REGSSNIAKKLLDQMTGLGLLPDRVLYTTIVD 402



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/342 (22%), Positives = 141/342 (41%), Gaps = 40/342 (11%)

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
           Y   + ++     I++A     +M  S  +  ++ YN       +      AEQ    M 
Sbjct: 12  YRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMI 71

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
                 N  T    +SG CK  N     + L  M  L   P++  +N  +         D
Sbjct: 72  PQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLD 131

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD-------- 309
                +  M E G +PD+VT++ +++    AG      EI+ +MV+ G  PD        
Sbjct: 132 VALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALV 191

Query: 310 ---IH------------------------VFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
               H                        +++ L  G+ +AG   KA+SI++ MR+ G  
Sbjct: 192 LGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCE 251

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           P++V +  +++  C+ + ++ A ++ +KM   G+ P++ +Y  LL G  +A +  +A  +
Sbjct: 252 PDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMM 311

Query: 403 L-QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           +   ME KG+    S   ++    +A+  A   KR  K  EE
Sbjct: 312 MVNKMEAKGLCDVVSYNTII----KALCTASHTKRAYKLFEE 349


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/432 (24%), Positives = 211/432 (48%), Gaps = 2/432 (0%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG   EA  +   ++++   P    Y  L+    +  + +    L ++++  G+K +++L
Sbjct: 426 KGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVL 485

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           F+ ++N       +DEA ++ + +   G       Y +L+ G+   GK   +L +++ M+
Sbjct: 486 FDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMT 545

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           + K++  +  TYN+L+         E A +V   M+  G+ P+  TYN + +AY + GE 
Sbjct: 546 E-KSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGEL 603

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A ++  EM+++++ P+  TC  +V G  + G +E AM  L  M  + +HPNLV+   L
Sbjct: 604 DNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVL 663

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           +        ++ V +    + + G+K +   ++ ++  +    +  K   +   M++ G 
Sbjct: 664 LNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGF 723

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
             D   ++ L +GY  +   +KA +  T M   GV PN+V +  ++ G   A  M     
Sbjct: 724 VADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDE 783

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           +++KM E G+NP+  TY+TL+ GYG+      +  L   M  +G  PK ST  ++   + 
Sbjct: 784 LFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFA 843

Query: 427 AIGLAREAKRVL 438
            +G   +A+ +L
Sbjct: 844 KVGKMDQARELL 855



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 195/402 (48%), Gaps = 2/402 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           EA  ++  +I  G  P ++TY+++V  L +  R      L+ +++K G+ P+ + +  +I
Sbjct: 256 EARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLI 315

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           ++  ++G+  EA     ++   G         TL+ G     KP+E+  + + +S+  N+
Sbjct: 316 DSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSK-LNL 374

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
            PN  TY  L+  +C    +E   +++ +M    I P+ +TY+++   Y + G    A  
Sbjct: 375 IPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAIN 434

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           ++ +M +  + PN     I++ GYCK G  E A      MK   +  N V+F+ L+    
Sbjct: 435 VMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLK 494

Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
             K  D  ++ L  +   G+  D V ++++MD +  AG       + ++M +  I  D+ 
Sbjct: 495 RGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVV 554

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
            +++L  G +  G+ + A+S+ + M + G+ PN   +  +I  +C   ++  A+ ++ +M
Sbjct: 555 TYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEM 613

Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
               I P+  T  TL+ G  EA +  +A  +L  M   G+ P
Sbjct: 614 KSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHP 655



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 207/425 (48%), Gaps = 20/425 (4%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           + YT+L+    +  +  + L+++ ++ +  +  D + +N +IN   E G   EA  ++  
Sbjct: 519 VNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSG 577

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
           M + G  P  +TYN +IK Y   G+ + +L+L   M   K + P+  T N LV       
Sbjct: 578 MIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHK-IMPSSITCNTLVVGLSEAG 636

Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            IE+A NV+ +M   GI P+ V +  L  A ++ G+     QM  ++ +  ++ N+    
Sbjct: 637 EIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYN 696

Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL---TLM 266
            ++  +C+    + A   L  M       + V +N+LI+G+ +   S  V KAL   T M
Sbjct: 697 NLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCE---SSHVKKALATYTQM 753

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              GV P++VT++ ++     AGLM +  E+FD M + G+ PD   +  L  GY + G  
Sbjct: 754 LNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNK 813

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           +++  +   M   G  P    +  +IS +    KM +A  +  +M   G+ P+  TY+ L
Sbjct: 814 KESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDIL 873

Query: 387 LWGYGE-AKQP---------WR--AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
           + G+   +K P         +R  A+ L+  M +KG  P KSTI  ++ ++   G   +A
Sbjct: 874 ICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDA 933

Query: 435 KRVLK 439
           +++LK
Sbjct: 934 EKLLK 938



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 197/408 (48%), Gaps = 5/408 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EA  +   + + G  P  + YTTL+ +L +        +  S++   GM
Sbjct: 280 VNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGM 339

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D ++   +++   +S    EA  +F+ +      P + TY  LI GY  VG  E    
Sbjct: 340 TLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVES 399

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LLQ M ++K++ PN  TY+ ++  +  K  ++EA NV+ KM+   I P+A  Y  L   Y
Sbjct: 400 LLQEM-EEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGY 458

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A  +  EM+ + ++ N     ++V+   +   M++A   L  +    +  + 
Sbjct: 459 CKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDH 518

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V + SL+ GF            +  M E  +  DVVT++ +++     G   + + ++  
Sbjct: 519 VNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSG 577

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M++ G+ P+   ++I+ K Y + GE   A  +   M+ + + P+ +   T++ G   A +
Sbjct: 578 MIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGE 637

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
           +++AM++  +M  +GI+PNL  +  LL     + +  +A  +LQ+ E+
Sbjct: 638 IEKAMNVLNEMSVMGIHPNLVIHRVLL---NASSKSGKANAVLQMHEQ 682



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 108/452 (23%), Positives = 202/452 (44%), Gaps = 61/452 (13%)

Query: 55  VEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK 114
           + K  + P  +L+N +I   +  G V +   I+ +M  S   P   T+N L+  +  +G 
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 115 PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYN 174
              +L LL    ++ +V+ +  TYN ++  +C    + +A+  +  MV      D +T N
Sbjct: 61  LILALDLL----RNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCN 116

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
            L + + + G     E+++  + +     +      ++ GYCK G M  A+  + RM++ 
Sbjct: 117 ILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKE 176

Query: 235 EVHPNLVVFNSLIKGFL-------------DIKDSDGV--------DKALTLMEEFGVKP 273
            +  ++V +N+LI GF              +I +S GV        D  +   +   ++ 
Sbjct: 177 GLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEA 236

Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
           D++T++TI+  +     + + + ++++M+  G  PD+  +S +  G  + G   +A+ +L
Sbjct: 237 DLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELL 296

Query: 334 TSMRKYGVHPNVVMFTTVI-------SGW----CNAVKMQRAMSIYEKMC---------- 372
             M+K GV PN V +TT+I       S W    C +  + R M++   MC          
Sbjct: 297 REMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKS 356

Query: 373 --------------EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
                         ++ + PN  TY  L+ GY +     R E LLQ MEEK + P   T 
Sbjct: 357 SKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITY 416

Query: 419 QLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
             + + +   G+  EA  V+K    D+  +PN
Sbjct: 417 SSIINGYTKKGILDEAINVMKKM-LDQNIIPN 447



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/407 (23%), Positives = 195/407 (47%), Gaps = 2/407 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G   EA    + L+  G    L+  TTLV  L +  + K    +   + K  + P+
Sbjct: 318 LFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPN 377

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           SI + A+I+   + G+++    + Q+M++    P   TY+++I GY   G  +E++ +++
Sbjct: 378 SITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMK 437

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M  D+N+ PN   Y IL+  +C     E A ++  +M  SG++ + V ++ L     + 
Sbjct: 438 KM-LDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRG 496

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                AE++L ++ +  +  +      ++ G+ K G    A+  +  M E  +  ++V +
Sbjct: 497 KRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTY 556

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N LI G L+    +      + M E G+ P+  T++ ++ A+   G +    E++++M  
Sbjct: 557 NVLINGLLEHGKYEA-KSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKS 615

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
             I P     + L  G   AGE +KA ++L  M   G+HPN+V+   +++    + K   
Sbjct: 616 HKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANA 675

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
            + ++E++ ++G+  N + Y  L+  +   +   +A  +L+ M   G
Sbjct: 676 VLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDG 722



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/431 (21%), Positives = 196/431 (45%), Gaps = 50/431 (11%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           I + L+  G    +I + TL+    +       L L+ ++ K+G+  D + +N +IN   
Sbjct: 134 IMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFC 193

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G  D+A  +  ++ +S     +  +N       +  K +++L          N++ + 
Sbjct: 194 KRGEYDKAKSLLHEISESRGVKDSVFFNI-----DDRIKKDDNL----------NLEADL 238

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
            TY  ++  +C ++ +EEA  +  +M+ +G  PD VTY+++     + G    A+++L E
Sbjct: 239 ITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLRE 298

Query: 196 MQNNQVRPNERT-----------------------------------CGIIVSGYCKEGN 220
           M+   V PN                                      C  +V G  K   
Sbjct: 299 MKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSK 358

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
            ++A      + +L + PN + + +LI G+  + D + V+  L  MEE  + P+V+T+S+
Sbjct: 359 PKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSS 418

Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
           I++ ++  G++ +   +   M+   I P+ +V++IL  GY +AG+ + A  +   M+  G
Sbjct: 419 IINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSG 478

Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
           +  N V+F  +++      +M  A  + + +   G+  +   Y +L+ G+ +A +   A 
Sbjct: 479 LKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAAL 538

Query: 401 ELLQVMEEKGV 411
            +++ M EK +
Sbjct: 539 NMVEEMTEKSI 549



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 108/469 (23%), Positives = 201/469 (42%), Gaps = 37/469 (7%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L    KP EA  +F  L +    P  ITYT L+    +    + + SL+ ++E+  + P+
Sbjct: 353 LFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPN 412

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            I ++++IN  ++ G +DEA+ + +KM D    P    Y  LI GY   GK E +  L  
Sbjct: 413 VITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYN 472

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M     +K N+  +++LV        ++EA  ++  + + G+  D V Y +L   + + 
Sbjct: 473 EMKL-SGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKA 531

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
           G+   A  M+ EM    +  +  T  ++++G  + G  E A      M E+ + PN   +
Sbjct: 532 GKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATY 590

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N +IK +    + D   +    M+   + P  +T +T++   S AG + K   + ++M  
Sbjct: 591 NIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSV 650

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
            GI P++ +  +L     ++G+      +   +   G+  N   +  +I  +C     ++
Sbjct: 651 MGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKK 710

Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA------------------------ 399
           A S+ + M   G   +  TY  L+ GY E+    +A                        
Sbjct: 711 ATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLG 770

Query: 400 -----------EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
                      +EL   M+E G+ P  ST   +   +  IG  +E+ R+
Sbjct: 771 GLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRL 819



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/439 (23%), Positives = 199/439 (45%), Gaps = 73/439 (16%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
           IT   LV    R    K    ++  +   G   D I FN +I+   ++G +  A+ + ++
Sbjct: 113 ITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVER 172

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP------NDR------- 136
           M+  G      +YNTLI G+   G+ +++  LL  +S+ + VK       +DR       
Sbjct: 173 MRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNL 232

Query: 137 -------TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
                  TY  ++  +C ++ +EEA  +  +M+ +G  PD VTY++              
Sbjct: 233 NLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSS-------------- 278

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
                                IV+G CK+G + +A   L  MK++ V PN V + +LI  
Sbjct: 279 ---------------------IVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLI-- 315

Query: 250 FLDIKDSDGVDKALTLMEEF---------GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
                  D + KA +  E F         G+  D+V  +T++D    +    + +++F  
Sbjct: 316 -------DSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRA 368

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           + K  + P+   ++ L  GY + G+ ++ ES+L  M +  ++PNV+ ++++I+G+     
Sbjct: 369 LSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGI 428

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           +  A+++ +KM +  I PN   Y  L+ GY +A +   A +L   M+  G++       +
Sbjct: 429 LDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDV 488

Query: 421 VADSWRAIGLAREAKRVLK 439
           + ++ +      EA+ +LK
Sbjct: 489 LVNNLKRGKRMDEAEELLK 507



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/427 (23%), Positives = 205/427 (48%), Gaps = 31/427 (7%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P + T+  LV A  +       L L+  V+   ++ D++ +N +I    + G V++A   
Sbjct: 43  PNVYTHNVLVHAWCKMGNLILALDLLRNVD---VEVDTVTYNTVIWGFCQHGLVNQAFGF 99

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
              M        T T N L+KG+  +G  +   +++  +      K +   +N L+  +C
Sbjct: 100 LSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCK-DVIGFNTLIDGYC 158

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ--------- 197
               +  A ++V +M   G+  D V+YNTL   + + GE  +A+ +L E+          
Sbjct: 159 KAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSV 218

Query: 198 ----NNQVRPNER--------TCGIIVSGYCKEGNMEDAMRFLYRMKELEVH---PNLVV 242
               +++++ ++         T   I+S YCK+  +E+A R LY  +E+ ++   P++V 
Sbjct: 219 FFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEA-RALY--EEMIINGFLPDVVT 275

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           ++S++ G           + L  M++ GV P+ V ++T++D+   AG   +       +V
Sbjct: 276 YSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLV 335

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
             G+  D+ + + L  G  ++ +P++AE +  ++ K  + PN + +T +I G+C    M+
Sbjct: 336 VRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDME 395

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
           R  S+ ++M E  INPN+ TY +++ GY +      A  +++ M ++ + P      ++ 
Sbjct: 396 RVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILI 455

Query: 423 DSWRAIG 429
           D +   G
Sbjct: 456 DGYCKAG 462



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 100/428 (23%), Positives = 208/428 (48%), Gaps = 29/428 (6%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRF---KSILSLIS---------------KVEKD---GM 60
           +EG    +++Y TL+    ++  +   KS+L  IS               +++KD    +
Sbjct: 175 KEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNL 234

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + D I +  +I+   +   ++EA  ++++M  +G  P   TY++++ G    G+  E+ +
Sbjct: 235 EADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQE 294

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL+ M +   V PN   Y  L+ +     S  EA+    ++V  G+  D V   TL    
Sbjct: 295 LLREMKK-MGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGL 353

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +   AE M   +    + PN  T   ++ GYCK G+ME     L  M+E  ++PN+
Sbjct: 354 FKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNV 413

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           + ++S+I G+        +D+A+ +M++     + P+   ++ ++D +  AG      ++
Sbjct: 414 ITYSSIINGY---TKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDL 470

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           +++M  +G++ +  +F +L     R     +AE +L  +   G+  + V +T+++ G+  
Sbjct: 471 YNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFK 530

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
           A K   A+++ E+M E  I  ++ TY  L+ G  E  + + A+ +   M E G+ P ++T
Sbjct: 531 AGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGK-YEAKSVYSGMIEMGLAPNQAT 589

Query: 418 IQLVADSW 425
             ++  ++
Sbjct: 590 YNIMIKAY 597



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 112/226 (49%), Gaps = 4/226 (1%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK +    +   L++ G +     Y  L+    R +  K   S++  + +DG   D++ +
Sbjct: 671 GKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTY 730

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           NA+I    ES +V +A+  + +M + G  P   TYN L+ G    G   E  +L   M +
Sbjct: 731 NALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKE 790

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +  + P+  TY+ L+  +    + +E+  +  +MVA G  P   TYN L   +A+ G+  
Sbjct: 791 N-GLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMD 849

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYC---KEGNMEDAMRFLYR 230
           +A ++L EMQ   V P+  T  I++ G+C   K  +++  ++ +YR
Sbjct: 850 QARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYR 895



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 24/181 (13%)

Query: 16  IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
           +F+ + E G  P   TY TL++   +    K  + L  ++   G  P +  +N +I+  +
Sbjct: 784 LFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFA 843

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
           + G +D+A ++  +M+  G  P++STY+ LI G+ N+ K  +                 D
Sbjct: 844 KVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDL----------------D 887

Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           RT   + R         +A N++ +M   G  P   T   ++  +A+ G+   AE++L E
Sbjct: 888 RTLKKIYRT--------DAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLKE 939

Query: 196 M 196
           +
Sbjct: 940 I 940


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 214/442 (48%), Gaps = 5/442 (1%)

Query: 21  IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
           ++ G++P L+T +TLV  +  + +    L L  K+ + G + D +L+  +INA  ++   
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 81  DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
             A+++ ++M    C     TY  +I      G   + LK+ + M  +  + PN   Y+ 
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMI-NMGICPNVIVYSS 119

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           L+   C    + EA N+  +MV+ GI+ + +TYN+L  A  ++G    A +   +M    
Sbjct: 120 LINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEG 179

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
           + P+  T   ++    K+G +++A +    M +    PN+V +NSL+ G       D   
Sbjct: 180 ILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAV 239

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           +   +M E G+K DV++++T+++ + ++G   +   +F  M    + P I  ++IL K  
Sbjct: 240 RLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKAL 299

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            + G  + A+ +  +M+  G  P++  +T ++ G C    ++ A+ ++  +  I   P++
Sbjct: 300 YQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSI 359

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
           + Y  L+ G  +A++   A E+   +   G+ P   T  ++ +     G   EA+R+   
Sbjct: 360 RIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQ 419

Query: 441 AEEDRQSMPNKKDEIAVESIHR 462
            EE       ++DEI+   I R
Sbjct: 420 MEES----GCEQDEISFNFIIR 437



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 176/344 (51%), Gaps = 1/344 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  EA  +F+ ++ +G +  +ITY +L+ A  R   +K      S++  +G+
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + F  +I+  S+ G V EA KIF+ M   G  P   TYN+L+ G     + + +++
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           L ++M  ++ +K +  +YN L+  +C+    EEA  +  KM    + P   TY  L +A 
Sbjct: 241 LFEVMV-ERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKAL 299

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            Q G    A+++   MQ     P+  T  +++ G CK G +E+A+     +K ++  P++
Sbjct: 300 YQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSI 359

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
            +++ LI G    +  +   +    +   G+ P++VT++ +++     G + + + +F  
Sbjct: 360 RIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQ 419

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
           M ++G E D   F+ + +G+++  + QKA   L  MR+    PN
Sbjct: 420 MEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPN 463



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 176/387 (45%), Gaps = 1/387 (0%)

Query: 93  SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIE 152
           SG +P   T +TL+KG    GK  ++L+L   M++    + +   Y  L+ A        
Sbjct: 3   SGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRS-GFQGDILLYGYLINALRKTRQAR 61

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
            A  +  +M++     +  TY  +  +  + G   +  +M  EM N  + PN      ++
Sbjct: 62  RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           +G C+ G + +A+     M    +  N++ +NSLI             +  + M   G+ 
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           PDVVTF+T++D  S  G + +  +IF+ M+K G  P+I  ++ L  G     +   A  +
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRL 241

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
              M + G+  +V+ + T+I+G+C + K + AM+++ KM    + P++ TY  LL    +
Sbjct: 242 FEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQ 301

Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKK 452
             +   A+EL   M+  G  P   T  ++ D     G   EA  V +S +  +     + 
Sbjct: 302 NGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRI 361

Query: 453 DEIAVESIHRKQNLSASNSTFLQIPGV 479
             I +  + + +   ++   F +IP V
Sbjct: 362 YSILIGGMFQARRWESAMEIFDEIPTV 388


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/444 (24%), Positives = 206/444 (46%), Gaps = 7/444 (1%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K H    ++  +  EG  P + TY  L+ AL +  +      L+ ++ K G  PD + + 
Sbjct: 160 KFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYT 219

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            ++ A  E G V+EA ++ ++    G +   S  N LI G    G+  E   L+  M  +
Sbjct: 220 TVVAAMCEDGRVEEAREVARRF---GAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGN 276

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
             V PN  +Y+ ++        +E A  V+ KM+  G +P+  T+++L + Y   G    
Sbjct: 277 -GVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGE 335

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM-KELEVHPNLVVFNSLI 247
              +   M    VRPN      +++G C  GN+ +A+    RM K+    PN+  +++L+
Sbjct: 336 GVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLV 395

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            GF+   D  G  +    M   GV+P+VV +++++D      +  +   + D+M   G  
Sbjct: 396 HGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCP 455

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P +  F+   KG    G    A  ++  M++YG  P+   +  ++ G  +  +++ A  +
Sbjct: 456 PTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACEL 515

Query: 368 YEKMCEIGINPNLKTYETLLWGY-GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
             ++ E  +  NL TY T+++G+    K+ W   ++L  M   GV+P   T+ +V  ++ 
Sbjct: 516 IRELEERKVELNLVTYNTVMYGFSSHGKEEW-VLQVLGRMLVNGVKPDAITVNVVIYAYS 574

Query: 427 AIGLAREAKRVLKSAEEDRQSMPN 450
            +G  R A + L      ++  P+
Sbjct: 575 KLGKVRTAIQFLDRITAGKELCPD 598



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 210/461 (45%), Gaps = 42/461 (9%)

Query: 25  HRPTLITYTTLVAALTRQKRFKSILSLIS--KVEKDGMKPDSILFNAMINACSESGNVDE 82
           H P  +TY  ++  L R     ++  ++   K+E+     DS  F  ++N+   SG  D 
Sbjct: 71  HTP--LTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDS--FICVLNSYKNSGLGDR 126

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKG-YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           A+K+F ++K+ GCKPT   YN L+    G  G     +  +    + + ++PN  TYN+L
Sbjct: 127 ALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVL 186

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ---------- 191
           ++A C    ++ A  ++ +M   G  PD V+Y T+  A  + G    A +          
Sbjct: 187 LKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGV 246

Query: 192 ----------------------MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
                                 ++ EM  N V PN  +   ++S     G +E A+  L 
Sbjct: 247 VSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLG 306

Query: 230 RMKELEVHPNLVVFNSLIKG-FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSA 288
           +M      PN+  F+SL+KG FL  +  +GV     ++ E GV+P+VV ++T+++    +
Sbjct: 307 KMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLE-GVRPNVVVYNTLLNGLCCS 365

Query: 289 GLMGKCQEIFDDMVK-AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
           G + +  ++   M K     P++  +S L  G+V+AG+ Q A  +   M   GV PNVV+
Sbjct: 366 GNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVV 425

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           +T+++   C      +A  + + M   G  P + T+ T + G     +   A  ++  M+
Sbjct: 426 YTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQ 485

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSM 448
             G  P   T   + D   ++   +EA  +++  EE +  +
Sbjct: 486 RYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVEL 526



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 185/386 (47%), Gaps = 3/386 (0%)

Query: 34  TLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS 93
            L+  L R+ R   +  L+ ++  +G+ P+ + ++++I+  S+ G V+ A+ +  KM   
Sbjct: 252 ALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRR 311

Query: 94  GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
           GC+P   T+++L+KGY   G+  E + L ++M  +  V+PN   YN L+   C   ++ E
Sbjct: 312 GCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLE-GVRPNVVVYNTLLNGLCCSGNLAE 370

Query: 154 AWNVVYKMVASGI-QPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           A +V  +M      +P+  TY+TL   + + G+   A ++  +M N  VRPN      +V
Sbjct: 371 AVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMV 430

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
              CK    + A R +  M      P +V FN+ IKG           + +  M+ +G  
Sbjct: 431 DVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCL 490

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           PD  T++ ++D   S   + +  E+  ++ +  +E ++  ++ +  G+   G+ +    +
Sbjct: 491 PDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQV 550

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG-INPNLKTYETLLWGYG 391
           L  M   GV P+ +    VI  +    K++ A+   +++     + P++  + +LLWG  
Sbjct: 551 LGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGIC 610

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKST 417
            +     A   L  M  KG+ P  +T
Sbjct: 611 NSLGIEEAIVYLNKMLNKGIFPNIAT 636



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/388 (23%), Positives = 192/388 (49%), Gaps = 1/388 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +G+  E   + + ++  G  P +++Y+++++ L+     +  L+++ K+ + G +P+
Sbjct: 257 LCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPN 316

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              F++++      G V E + +++ M   G +P    YNTL+ G    G   E++ +  
Sbjct: 317 VHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCG 376

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +D   +PN  TY+ LV  +     ++ A  V  KMV  G++P+ V Y ++     + 
Sbjct: 377 RMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKN 436

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
               +A +++  M  +   P   T    + G C  G +  AMR + +M+     P+   +
Sbjct: 437 SMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTY 496

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N L+ G   + +     + +  +EE  V+ ++VT++T+M  +SS G      ++   M+ 
Sbjct: 497 NELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLV 556

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG-VHPNVVMFTTVISGWCNAVKMQ 362
            G++PD    +++   Y + G+ + A   L  +     + P+++  T+++ G CN++ ++
Sbjct: 557 NGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIE 616

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGY 390
            A+    KM   GI PN+ T++ L+ G+
Sbjct: 617 EAIVYLNKMLNKGIFPNIATWDVLVRGF 644



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 157/340 (46%), Gaps = 38/340 (11%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           +I  G RP + T+++L+       R    + L   +  +G++P+ +++N ++N    SGN
Sbjct: 308 MIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGN 367

Query: 80  VDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTY 138
           + EA+ +  +M KD  C+P  +TY+TL+ G+   G  + + ++   M  +  V+PN   Y
Sbjct: 368 LAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMV-NCGVRPNVVVY 426

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
             +V   C  +  ++A+ ++  M   G  P  VT+NT  +     G    A +++ +MQ 
Sbjct: 427 TSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQR 486

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
               P+ RT   ++ G      +++A   +  ++E +V  NLV +N+++ GF      + 
Sbjct: 487 YGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEW 546

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAG----------------------------L 290
           V + L  M   GVKPD +T + ++ A+S  G                            L
Sbjct: 547 VLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLL 606

Query: 291 MGKCQEI--------FDDMVKAGIEPDIHVFSILAKGYVR 322
            G C  +         + M+  GI P+I  + +L +G+ +
Sbjct: 607 WGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGFFK 646


>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/421 (23%), Positives = 205/421 (48%), Gaps = 1/421 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L + G+      +  ++    R+ + +  + +   ++K G+ PD+  ++ +++   + G+
Sbjct: 272 LCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGD 331

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
           V     +  +M  +G  PT  +Y++L+ G    GK E + +L + + +++  K +   Y+
Sbjct: 332 VLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRL-EEQGFKHDHIVYS 390

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
           I++   C   +IE   ++   MV     PDA  Y +L  A+ ++     A  +   M ++
Sbjct: 391 IILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDS 450

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            V PN  TC I+V G+ KE  +++A  FL+++++  + PNL ++  +I G   +  SD V
Sbjct: 451 GVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHV 510

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
                 M + G  PD V +S I+D++  A  + +   +F  M+  G +P++  ++ L  G
Sbjct: 511 WGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLING 570

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
                   +  ++   M   G+ P+ +++T++I  +C    M+ A+ I+  M ++G++ +
Sbjct: 571 LCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSAD 630

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
              Y  L+ G+ +      A+ L++ M  KG+ P   T   +   +  IG  R+A     
Sbjct: 631 AFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYN 690

Query: 440 S 440
           S
Sbjct: 691 S 691



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 173/371 (46%), Gaps = 9/371 (2%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  PTL++Y++L+  L R  + +    L  ++E+ G K D I+++ ++N C +  N++  
Sbjct: 346 GIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVV 405

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
             ++  M      P    Y +LI  +       ++L + +LM  D  V PN  T  ILV 
Sbjct: 406 CDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELM-LDSGVSPNVVTCTILVD 464

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
            +  +  I+EA+  ++K+   GI P+   Y  +     +  ++     +  +M      P
Sbjct: 465 GFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVP 524

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +     II+  + K   + +A R  ++M +    PN+  + SLI G   +   D + + +
Sbjct: 525 DTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLING---LCHDDRLPEVV 581

Query: 264 TLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           TL +     G+ PD + +++++  +     M    EIF  M K G+  D  +++ L  G+
Sbjct: 582 TLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGF 641

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            +      A+ ++  M   G+ P+VV +T +I G+      ++A   Y  M + GI P+ 
Sbjct: 642 SKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDA 701

Query: 381 KTYETLLWGYG 391
           K   + + G+G
Sbjct: 702 KL--SCILGFG 710



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/430 (23%), Positives = 182/430 (42%), Gaps = 8/430 (1%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G    L  Y T++        F+  L   ++ +K G++    L N ++    E   +  A
Sbjct: 136 GSMTLLQVYATIIRIFVELSMFEDALLTYTEAKKVGVELQ--LCNFLLKCLVERNQIIYA 193

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGY--GNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
             +F  MK SG  P   +Y+ L+  Y  G+     E+ +LL  M   K VKPN  TY   
Sbjct: 194 RSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEM-KGVKPNAATYGTY 252

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           +        +  AWN +  +   G   +   +N + + + + G+   A ++   M+   +
Sbjct: 253 LYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGL 312

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
            P+  +  I+V G CK+G++      L  M    + P LV ++SL+ G       +   +
Sbjct: 313 VPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFE 372

Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
               +EE G K D + +S I++       +    ++++DMV     PD + ++ L   + 
Sbjct: 373 LFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFC 432

Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
           R      A  +   M   GV PNVV  T ++ G+     +  A     K+ + GI PNL 
Sbjct: 433 RHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLC 492

Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW-RAIGLAREAKRVLKS 440
            Y  ++ G  +  +      +   M ++G  P      ++ DS+ +A+ L  EA R+   
Sbjct: 493 MYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLP-EAFRLFHK 551

Query: 441 AEEDRQSMPN 450
              D  + PN
Sbjct: 552 M-LDEGTKPN 560



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 85/163 (52%), Gaps = 3/163 (1%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  +F+ +++EG +P + TYT+L+  L    R   +++L   +  +G+ PD IL+ 
Sbjct: 541 KLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYT 600

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
           ++I    +  N+  A++IF+ M   G       Y  LI G+  V   + +  L++ M+ +
Sbjct: 601 SLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMT-N 659

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVY-KMVASGIQPDA 170
           K + P+  TY  L+  +  K   E   N+ Y  M+ +GI PDA
Sbjct: 660 KGLTPSVVTYTNLIIGY-FKIGDERKANMTYNSMLQAGITPDA 701


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 198/423 (46%), Gaps = 1/423 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L+   K  EA   F      G  P L TY  L+    R+K+F     L++ +   G 
Sbjct: 96  LNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGF 155

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   +  +IN+ +++G + +A+K+F +M + G  P  + YN LI G+   G    + +
Sbjct: 156 SPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASE 215

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + + +  +V PN  +YN+++   C     +E++ + ++M  +    D  TY+TL    
Sbjct: 216 IWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGL 275

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A ++  EM  N V P+      +++GY + G +E+ +  L+++ E E    +
Sbjct: 276 CGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE-LWKVMEKEGCRTV 334

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N LI+G  +    D       L+ E     D +T+  ++      G + K   I ++
Sbjct: 335 VSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEE 394

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
                 + D   +S +  G  R G   +   +L  M K+G  PN  +   VI+G+  A K
Sbjct: 395 AENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASK 454

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           ++ A+  +  M   G  P + TY TL+ G  +A++   A  L++ M +KG +P   T  L
Sbjct: 455 LEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSL 514

Query: 421 VAD 423
           + +
Sbjct: 515 LMN 517



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/431 (22%), Positives = 210/431 (48%), Gaps = 8/431 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   GK  E+  I++ + +      L TY+TL+  L           +  ++ ++G+
Sbjct: 237 INGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGV 296

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD +++N M+N    +G ++E +++++ M+  GC+ T  +YN LI+G     K +E++ 
Sbjct: 297 SPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAIS 355

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + +L+ + K+   +  TY +LV   C    + +A +++ +        D   Y+++    
Sbjct: 356 IWELLPE-KDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGL 414

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G       +L +M  +  +PN   C  +++G+ +   +EDA+RF   M      P +
Sbjct: 415 CREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTV 474

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           V +N+LI G   +  ++   +A  L++E    G KP+++T+S +M+       +     +
Sbjct: 475 VTYNTLING---LSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNL 531

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
           +   ++ G +PD+ + +I+  G   +G+ + A  + + M++    PN+V   T++ G+  
Sbjct: 532 WCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYK 591

Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
               +RA  I++ + + G+ P++ +Y   L G     +   A   L    ++GV P   T
Sbjct: 592 VRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAIT 651

Query: 418 IQLVADSWRAI 428
             ++   + A+
Sbjct: 652 WNILVQGYLAL 662



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 194/390 (49%), Gaps = 8/390 (2%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P + +Y  ++  L +  +F     +  +++K+    D   ++ +I+    SGN+D A ++
Sbjct: 228 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRV 287

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT---YNILVR 143
           +++M ++G  P    YNT++ GY   G+ EE L+L ++M      K   RT   YNIL+R
Sbjct: 288 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME-----KEGCRTVVSYNILIR 342

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
                  ++EA ++   +       D++TY  L     + G   +A  +L E +N +   
Sbjct: 343 GLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL 402

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           +      +++G C+EG +++    L +M +    PN  V N++I GF+     +   +  
Sbjct: 403 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFF 462

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M   G  P VVT++T+++  S A    +   +  +M++ G +P++  +S+L  G  + 
Sbjct: 463 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQG 522

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
            +   A ++     + G  P+V M   +I G C++ K++ A+ +Y +M +    PNL T+
Sbjct: 523 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTH 582

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
            TL+ G+ + +   RA ++   + + G++P
Sbjct: 583 NTLMEGFYKVRDFERASKIWDHILQYGLQP 612



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/401 (22%), Positives = 179/401 (44%), Gaps = 17/401 (4%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKM-KDSGCKPTTSTYNTLIK----------GYG 110
           P S+    +I       N   A+ IF  + +  G   T   ++ ++K           Y 
Sbjct: 5   PKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHAYA 64

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
               P+++L + Q M +    +P  R+YN L+ A    N  +EA +        G+ P+ 
Sbjct: 65  KNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNL 124

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
            TYN L +   +  +  +A+++L  M      P+  + G +++   K G M DA++    
Sbjct: 125 QTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDE 184

Query: 231 MKELEVHPNLVVFNSLIKGFL---DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
           M E  V P++  +N LI GF    DI ++  + +   L++   V P++ +++ +++    
Sbjct: 185 MPERGVTPDVACYNILIDGFFKKGDILNASEIWE--RLLKGPSVYPNIPSYNVMINGLCK 242

Query: 288 AGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
            G   +  EI+  M K     D++ +S L  G   +G    A  +   M + GV P+VV+
Sbjct: 243 CGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVV 302

Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           + T+++G+  A +++  + +++ M + G    + +Y  L+ G  E  +   A  + +++ 
Sbjct: 303 YNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLP 361

Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSM 448
           EK       T  ++       G   +A  +L+ AE  R  +
Sbjct: 362 EKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL 402



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 118/259 (45%), Gaps = 34/259 (13%)

Query: 30  ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
             Y++++  L R+ R   +  ++ ++ K G KP+  + NA+IN    +  +++A++ F  
Sbjct: 405 FAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGN 464

Query: 90  MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ---------------------- 127
           M   GC PT  TYNTLI G     +  E+  L++ M Q                      
Sbjct: 465 MVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKK 524

Query: 128 ------------DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNT 175
                       +K  KP+ + +NI++   CS   +E+A  +  +M      P+ VT+NT
Sbjct: 525 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNT 584

Query: 176 LARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
           L   + +  +  RA ++   +    ++P+  +  I + G C    + DA+ FL    +  
Sbjct: 585 LMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRG 644

Query: 236 VHPNLVVFNSLIKGFLDIK 254
           V P  + +N L++G+L +K
Sbjct: 645 VLPTAITWNILVQGYLALK 663


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 182/378 (48%), Gaps = 8/378 (2%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKD-SGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           P+++ +N +I      G V   ++I ++M++  G  P   TY T+I G+  VGK E++ K
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATK 204

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +   M  +  V+PN   YN L+  +C + ++E A     +MV  G+     TYN      
Sbjct: 205 VFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTL 264

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
              G    A  ++ EM    + P+  T  I+++GYCKEG  + AM+    M    +   +
Sbjct: 265 FMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATV 324

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V + SLI            D+        G++PD+  ++ ++++  + G M +  EI  +
Sbjct: 325 VTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGE 384

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M K  I PD   ++ L +G    G   +A  ++  M K G+ P++V + T+ISG+     
Sbjct: 385 MEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGD 444

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST-IQ 419
           ++ A+ + ++M   G NP L TY  ++ G     Q   AE+L++ M   G+ P  ST I 
Sbjct: 445 IKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYIS 504

Query: 420 LVADSWRAIGLAREAKRV 437
           L+       GL  E +R+
Sbjct: 505 LIE------GLTTEDERL 516



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 185/388 (47%), Gaps = 7/388 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKV-EKDGMKP 62
           L   GKP  A      L+ +   P  +TY T++A    + R ++ + ++ ++ E+ G+ P
Sbjct: 126 LCTAGKPVRALE----LLRQMPSPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAP 181

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSG-CKPTTSTYNTLIKGYGNVGKPEESLKL 121
           D   +  +I+   + G V++A K+F +M   G  +P    YN LI GY + G  E +L+ 
Sbjct: 182 DKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRY 241

Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
              M  D+ V     TYN+ V     +    EA  +V +M   G+ PDA TYN L   Y 
Sbjct: 242 RGEMV-DRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYC 300

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
           + G+  +A +M   M    +R    T   ++     +G +++  R         + P+L 
Sbjct: 301 KEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLF 360

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
           ++N+LI       D D   + +  ME+  + PD VT++T+M      G + + + + ++M
Sbjct: 361 MYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEM 420

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
            K GI+PD+  ++ L  GY   G+ + A  +   M   G +P ++ +  +I G C   + 
Sbjct: 421 TKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQG 480

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWG 389
             A  + ++M   GI P+  TY +L+ G
Sbjct: 481 GDAEDLVKEMVGNGITPDDSTYISLIEG 508



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 165/353 (46%), Gaps = 42/353 (11%)

Query: 98  TTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
           +T+T+N +++     GKP  +L+LL+ M       PN  TYN ++  +C++  ++    +
Sbjct: 115 STTTFNIMLRHLCTAGKPVRALELLRQMPS-----PNAVTYNTVIAGFCARGRVQAGIEI 169

Query: 158 VYKMVA-SGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM-QNNQVRPNERTCGIIVSGY 215
           + +M    GI PD  TY T+   + + G+   A ++  EM    +V PN      ++ GY
Sbjct: 170 MREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGY 229

Query: 216 CKEGNMEDAMRFLYRMKE-----------LEVH------------------------PNL 240
           C +GN+E A+R+   M +           L VH                        P+ 
Sbjct: 230 CDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDA 289

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +N LI G+          K   +M   G++  VVT+++++ A S  G++ +   +F+D
Sbjct: 290 FTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFND 349

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
            V+ GI PD+ +++ L   +   G+  +A  I+  M K  + P+ V + T++ G C   +
Sbjct: 350 AVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGR 409

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           +  A  + E+M + GI P+L +Y TL+ GY        A ++   M  KG  P
Sbjct: 410 LDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNP 462



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NIL+     +GK  +A  +F  ++ +G R T++TYT+L+ AL+ +   +    L +   +
Sbjct: 293 NILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVR 352

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G++PD  ++NA+IN+    G++D A +I  +M+     P   TYNTL++G   +G+ +E
Sbjct: 353 RGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDE 412

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +  L++ M++ + ++P+  +YN L+  +  K  I++A  V  +M+  G  P  +TYN + 
Sbjct: 413 ARGLIEEMTK-RGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMI 471

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
           +     G+   AE ++ EM  N + P++ T   ++ G   E
Sbjct: 472 KGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTE 512



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 119/250 (47%), Gaps = 1/250 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L  +G+  EAH +   + E+G  P   TY  L+    ++ + K  + +   +   G+
Sbjct: 261 VHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGI 320

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +   + + ++I+A S  G V E  ++F      G +P    YN LI  +   G  + + +
Sbjct: 321 RATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFE 380

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           ++  M + K + P+D TYN L+R  C    ++EA  ++ +M   GIQPD V+YNTL   Y
Sbjct: 381 IMGEMEK-KRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGY 439

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           +  G+   A ++  EM      P   T   ++ G C  G   DA   +  M    + P+ 
Sbjct: 440 SMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDD 499

Query: 241 VVFNSLIKGF 250
             + SLI+G 
Sbjct: 500 STYISLIEGL 509



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 108/237 (45%), Gaps = 6/237 (2%)

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI-KDSDGVDKALTL 265
           T  I++   C  G    A+  L +M      PN V +N++I GF    +   G++    +
Sbjct: 118 TFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGIEIMREM 173

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG-IEPDIHVFSILAKGYVRAG 324
            E  G+ PD  T++T++  W   G +    ++FD+M+  G +EP+  +++ L  GY   G
Sbjct: 174 RERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQG 233

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
             + A      M   GV   V  +   +       +   A ++ E+M E G+ P+  TY 
Sbjct: 234 NLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYN 293

Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
            L+ GY +  +  +A ++ +VM  KG+R    T   +  +    G+ +E  R+   A
Sbjct: 294 ILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDA 350



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 5/115 (4%)

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
           +F D+ +  +      F+I+ +    AG+P +A  +L  M      PN V + TVI+G+C
Sbjct: 103 LFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFC 158

Query: 357 NAVKMQRAMSIYEKMCEI-GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
              ++Q  + I  +M E  GI P+  TY T++ G+ +  +   A ++   M  +G
Sbjct: 159 ARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEG 213



 Score = 45.1 bits (105), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 78/190 (41%), Gaps = 24/190 (12%)

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
           P  A  +   + +  +  +   F  ++   C A K  RA+ +  +M     +PN  TY T
Sbjct: 97  PAPAFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNT 152

Query: 386 LLWGYGEAKQPWRAEELLQVMEEKG-VRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           ++ G+    +     E+++ M E+G + P K T   V   W  +G   +A +V       
Sbjct: 153 VIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVF------ 206

Query: 445 RQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSEHNGSSAAKIRSQIVLRSDTVW 504
                   DE+  E       +  +   +  + G    + N   A + R ++V R  ++ 
Sbjct: 207 --------DEMLTEG-----KVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMT 253

Query: 505 TATKSLFVNT 514
            AT +LFV+T
Sbjct: 254 VATYNLFVHT 263


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 214/435 (49%), Gaps = 6/435 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N  +   +  EA   F      G  P L TY  L+    ++++F+    L++ + ++G+
Sbjct: 121 LNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGL 180

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD + +  +INA ++SGN+ +A+++F +M   G  P    YN LI G+   G   ++ +
Sbjct: 181 NPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANE 240

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           + + +  + +V P+  TYNI++   C    ++E+  +  +M  +   PD  T++++    
Sbjct: 241 IWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGL 300

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
           ++ G    AE++  EM  + + P+ RT   ++SG  + G +      L+ +       N+
Sbjct: 301 SKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFE-LWNVMSKNNCCNI 359

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N LI+G LD K  +       L+ E G+K D  T+  +++     G + K   I ++
Sbjct: 360 VSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEE 419

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
               G + D   +S +  G  + G  ++A  ++  M+K     N  +F ++I+G+  A K
Sbjct: 420 AENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFK 479

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           ++ A+S+  +M      P + +Y T++ G  +A++   A   L+ M E+G++P   T  L
Sbjct: 480 LEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSL 539

Query: 421 VADSWRAIGLAREAK 435
           + D     GL R  K
Sbjct: 540 LID-----GLCRGEK 549



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 103/454 (22%), Positives = 208/454 (45%), Gaps = 38/454 (8%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGH-RPTLITYTTLVAALTRQKRFKSILSLISKVE 56
           NIL+     KG   +A+ I+  L+ E    P++ TY  ++  L +  +    + + ++++
Sbjct: 223 NILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMK 282

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
           K+   PD   F++MI+  S++GN + A K+FQ+M +SG  P   TYN ++ G    GK  
Sbjct: 283 KNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLN 342

Query: 117 ESLKLLQLMSQ---------------------------------DKNVKPNDRTYNILVR 143
           +  +L  +MS+                                 ++ +K +  TY +L+ 
Sbjct: 343 KCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLIN 402

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
             C    + +A  ++ +    G   D   Y+++     + G   +A +++ +M+ N+ + 
Sbjct: 403 GLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKL 462

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N      +++GY +   +E+A+  L  MK  +  P +V +N++I G    +       +L
Sbjct: 463 NSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSL 522

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
             M E G+KPD++T+S ++D       +     ++   +   ++PD+ + +I+  G   A
Sbjct: 523 KEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTA 582

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
            +   A  I T MR+    P++V   T++ G   A     A+ I++++ E G+ P++ +Y
Sbjct: 583 QKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISY 642

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
                G     +   A E L    ++G+ P   T
Sbjct: 643 NITFKGLCSCARVSDAIEFLYDALDRGILPNAPT 676



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 99/422 (23%), Positives = 194/422 (45%), Gaps = 7/422 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLI-SKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           P +I+ T ++  L  +K   + L++  S  +  G      +F+ ++    +   V    +
Sbjct: 5   PKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGR 64

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           I   M+   C  +     + IK Y     P+++L L Q M       P  R++N ++ A+
Sbjct: 65  IVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAF 124

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
              N   EA         +G+ P+  TYN L +   +  +  + + +L  M  N + P+ 
Sbjct: 125 IESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDI 184

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL---DIKDSDGVDKA 262
            + G +++   K GN+ DA+     M    V+P+++ +N LI GFL   D   ++ + K 
Sbjct: 185 LSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWK- 243

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
             L+ E  V P V T++ +++     G + +  E+++ M K    PD+  FS +  G  +
Sbjct: 244 -RLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSK 302

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           AG    AE +   M + G+ P+V  +  ++SG     K+ +   ++  M +     N+ +
Sbjct: 303 AGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNC-CNIVS 361

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
           Y  L+ G  + K+  +A    Q++ E+G++   +T  L+ +     G   +A R+L+ AE
Sbjct: 362 YNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAE 421

Query: 443 ED 444
            +
Sbjct: 422 NE 423



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/349 (22%), Positives = 170/349 (48%), Gaps = 2/349 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   GK ++   ++N ++ + +   +++Y  L+  L   K+ +  +     + + G+K D
Sbjct: 335 LFRTGKLNKCFELWN-VMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKAD 393

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           S  +  +IN   ++G +++A++I ++ ++ G    T  Y++++ G    G  E++++L+ 
Sbjct: 394 STTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIH 453

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M +++  K N   +N L+  +     +EEA +V+ +M +    P  V+YNT+     + 
Sbjct: 454 QMKKNRR-KLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKA 512

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
                A   L EM    ++P+  T  +++ G C+   ++ A+   ++     + P+L + 
Sbjct: 513 ERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMH 572

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N +I G    +  D   +  T M +    PD+VT +TIM+    AG   +  +I+D +++
Sbjct: 573 NIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILE 632

Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
           AG++PDI  ++I  KG         A   L      G+ PN   +  ++
Sbjct: 633 AGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLV 681



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/318 (22%), Positives = 154/318 (48%), Gaps = 1/318 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L+   K  +A   +  L E G +    TY  L+  L +       L ++ + E +G   D
Sbjct: 369 LLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLD 428

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
           +  +++M++   + G +++A+++  +MK +  K  +  +N+LI GY    K EE++ +L+
Sbjct: 429 TFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLR 488

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
            M + K+  P   +YN ++   C      +A+  + +M+  G++PD +TY+ L     + 
Sbjct: 489 EM-KSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRG 547

Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
            +   A  +  +  N +++P+ +   II+ G C    ++ A+    +M+++   P+LV  
Sbjct: 548 EKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTH 607

Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
           N++++G     D     K    + E G++PD+++++       S   +    E   D + 
Sbjct: 608 NTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALD 667

Query: 304 AGIEPDIHVFSILAKGYV 321
            GI P+   +++L +  V
Sbjct: 668 RGILPNAPTWNVLVRAVV 685



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 128/288 (44%), Gaps = 34/288 (11%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G  ++A  I      EG       Y+++V  L ++   +  + LI +++K+  
Sbjct: 401 INGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRR 460

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK------ 114
           K +S +FN++IN    +  ++EA+ + ++MK   C PT  +YNT+I G     +      
Sbjct: 461 KLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYL 520

Query: 115 -----PEESLK---------------------LLQLMSQ--DKNVKPNDRTYNILVRAWC 146
                 EE LK                      L L  Q  +K +KP+ + +NI++   C
Sbjct: 521 SLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLC 580

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
           +   ++ A  +  +M      PD VT+NT+     + G+   A ++   +    ++P+  
Sbjct: 581 TAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDII 640

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIK 254
           +  I   G C    + DA+ FLY   +  + PN   +N L++  +D K
Sbjct: 641 SYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDK 688


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 207/413 (50%), Gaps = 8/413 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L   G    A  +F+C+  +G  P       LV++  R  +  S  + +++V   G+
Sbjct: 116 MRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGI 175

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K    ++N ++N   +   VDEA+ +F++  +    P   ++N LI+G   +G+ +++ +
Sbjct: 176 KVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFE 235

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK-MVASGIQPDAVTYNTLARA 179
             Q M  +    P+  +YN L+  +C  N I +  +++ + M+  G+ PD +TY ++   
Sbjct: 236 FFQNMG-NFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISG 294

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           Y + G+   A ++  EM ++ ++PN+ T  +++ G+ K GNM  AM    +M  L   P+
Sbjct: 295 YCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPD 354

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQE 296
           +V F SLI G+        V++ L L EE  V+   P+V T++ +++A      + + + 
Sbjct: 355 VVTFTSLIDGYCR---EGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARN 411

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
               +  + + P   +++ +  G+ +AG+  +A  I+  M++    P+ + FT +I G C
Sbjct: 412 FLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNC 471

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
              +M  A+S + KM EI   P+  T  +L+    +A  P  A ++ Q   +K
Sbjct: 472 MKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 186/415 (44%), Gaps = 2/415 (0%)

Query: 28  TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIF 87
           T  TY  L+  L +     S   +   +  DG+ PDS +   ++++ +  G +D A    
Sbjct: 108 TFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFL 167

Query: 88  QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
            ++   G K +   YN L+         +E++ L +   +   V P+  ++NIL+R  C 
Sbjct: 168 NEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFV-PDVYSFNILIRGLCR 226

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE-MQNNQVRPNER 206
              I++A+     M   G  PD V+YNTL   + +  E  +   +L E M    V P+  
Sbjct: 227 IGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVI 286

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   I+SGYCK G+M+ A      M    + PN   FN LI GF  + +          M
Sbjct: 287 TYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKM 346

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              G  PDVVTF++++D +   G + +  +++++M    + P+++ +++L     +    
Sbjct: 347 LLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRI 406

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           ++A + L  ++   V P   ++  VI G+C A K+  A  I  +M E    P+  T+  L
Sbjct: 407 REARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTIL 466

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           + G     +   A      M E    P + TI  +       G+  EA ++ ++A
Sbjct: 467 IIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAA 521



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 168/355 (47%), Gaps = 3/355 (0%)

Query: 98  TTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
           T +TY+ L++    VG  + +  +   M  D  + P+     +LV ++     ++ A N 
Sbjct: 108 TFNTYDLLMRNLCKVGLNDSAKIVFDCMRSD-GILPDSSILELLVSSYARMGKLDSAKNF 166

Query: 158 VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
           + ++   GI+     YN L     +      A  +  E       P+  +  I++ G C+
Sbjct: 167 LNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCR 226

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD-SDGVDKALTLMEEFGVKPDVV 276
            G ++ A  F   M      P++V +N+LI GF  + + S G D     M   GV PDV+
Sbjct: 227 IGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVI 286

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T+++I+  +   G M    E+FD+MV +GI+P+   F++L  G+ + G  + A  +   M
Sbjct: 287 TYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKM 346

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
              G  P+VV FT++I G+C   ++ + + ++E+M    ++PN+ TY  L+    +  + 
Sbjct: 347 LLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRI 406

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
             A   L+ ++   V PK      V D +   G   EA  ++   +E ++  P+K
Sbjct: 407 REARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQE-KKCRPDK 460



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 162/333 (48%), Gaps = 6/333 (1%)

Query: 115 PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK-MVASGIQPDAVTY 173
           P   LK  +      ++     TY++L+R  C K  + ++  +V+  M + GI PD+   
Sbjct: 89  PLLGLKFFEFSRTHLSINHTFNTYDLLMRNLC-KVGLNDSAKIVFDCMRSDGILPDSSIL 147

Query: 174 NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
             L  +YA+ G+   A+  L E+    ++ +      +++   K+  +++A+       E
Sbjct: 148 ELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLE 207

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
               P++  FN LI+G   I + D   +    M  FG  PD+V+++T+++ +     + K
Sbjct: 208 PYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISK 267

Query: 294 CQEIF-DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
             ++  +DM+  G+ PD+  ++ +  GY + G+ + A  +   M   G+ PN   F  +I
Sbjct: 268 GHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLI 327

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
            G+     M+ AM +YEKM  +G  P++ T+ +L+ GY    +  +  +L + M+ + + 
Sbjct: 328 DGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLS 387

Query: 413 PKKSTIQLVADSWRAIGLAREAK---RVLKSAE 442
           P   T  ++ ++       REA+   R LKS+E
Sbjct: 388 PNVYTYAVLINALCKENRIREARNFLRHLKSSE 420



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 54/131 (41%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  + +  EA      L      P    Y  ++    +  +      +++++++   
Sbjct: 397 INALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKC 456

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD I F  +I      G + EA+  F KM +  C P   T N+LI      G P E+ +
Sbjct: 457 RPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQ 516

Query: 121 LLQLMSQDKNV 131
           + Q   Q  N+
Sbjct: 517 IKQAALQKLNL 527


>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 536

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 200/414 (48%), Gaps = 12/414 (2%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           R +  TY  L  +L +         +   ++ DG+ P+S L   ++++ +E G +  A  
Sbjct: 100 RHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATA 159

Query: 86  IF-QKMKDSGC-KPTTSTYNTLIKGYGNVGKPEESLKLLQ--LMSQDKNVKPNDRTYNIL 141
           +  Q  +  GC     S  NTL+K    + + E+++KL +  L  Q  N   + +T+NIL
Sbjct: 160 LLLQSYEVEGCCMVVNSLLNTLVK----LDRVEDAMKLFEEHLRFQSCN---DTKTFNIL 212

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ- 200
           +R  C     E+A  ++  M   G  PD VTYNTL + + +  E  +A +M  +++++  
Sbjct: 213 IRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSG 272

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
             P+  T   ++SGYCK G M++A   L  M  L ++P  V FN L+ G+    +    +
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAE 332

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           +    M  FG  PDVVTF++++D +   G + +   ++++M   G+ P+   +SIL    
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINAL 392

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
            +     KA  +L  +    + P   M+  VI G+C A K+  A+ I E+M +    P+ 
Sbjct: 393 CKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDK 452

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
            T+  L+ G+    + + A  +   M   G  P K T+  +       G+A+EA
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 171/355 (48%), Gaps = 11/355 (3%)

Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
           TYN L +     G  + + ++ + M  D  + PN R    LV ++  K  +  A  ++ +
Sbjct: 105 TYNLLTRSLCKAGMHDLAGQMFECMKSD-GISPNSRLLGFLVSSFAEKGKLHCATALLLQ 163

Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
             +  ++   +  N+L     +      A ++  E    Q   + +T  I++ G C  G 
Sbjct: 164 --SYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGK 221

Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF----GVKPDVV 276
            E A+  L  M      P++V +N+LIKGF     S+ + KA  + ++     G  PDVV
Sbjct: 222 AEKAVELLGGMSGFGCLPDIVTYNTLIKGFCK---SNELKKANEMFDDVKSSSGCSPDVV 278

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T+++++  +  AG M +   + DDM++ GI P    F++L  GY +AGE   AE I   M
Sbjct: 279 TYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKM 338

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
             +G  P+VV FT++I G+C   ++ +   ++E+M   G+ PN  TY  L+    +  + 
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRL 398

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
            +A ELL  +  K + P+      V D +   G   EA  +++  E+ ++  P+K
Sbjct: 399 LKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEK-KKCKPDK 452



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 124/228 (54%), Gaps = 1/228 (0%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
           G  P ++TYT++++   +  + +    L+  + + G+ P ++ FN +++  +++G +  A
Sbjct: 272 GCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTA 331

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            +I  KM   GC P   T+ +LI GY  VG+  +  +L + M+  + + PN  TY+IL+ 
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNA-RGMFPNAFTYSILIN 390

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           A C +N + +A  ++ ++ +  I P    YN +   + + G+   A  ++ EM+  + +P
Sbjct: 391 ALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKP 450

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
           ++ T  I++ G+C +G M +A+   ++M  +   P+ +  +SL+   L
Sbjct: 451 DKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLL 498



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 8/212 (3%)

Query: 1   MNILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE 56
            N+LV      G+ H A  I   +I  G  P ++T+T+L+    R  +      L  ++ 
Sbjct: 315 FNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMN 374

Query: 57  KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
             GM P++  ++ +INA  +   + +A ++  ++      P    YN +I G+   GK  
Sbjct: 375 ARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVN 434

Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
           E++ +++ M + K  KP+  T+ IL+   C K  + EA ++ +KMVA G  PD +T ++L
Sbjct: 435 EAIVIVEEM-EKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSL 493

Query: 177 ARAYAQYG---ETYRAEQMLFEMQNNQVRPNE 205
                + G   E Y   Q+  + Q N   P E
Sbjct: 494 LSCLLKAGMAKEAYHLNQIAHKGQINDGAPLE 525



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 5/219 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA  + + ++  G  PT +T+  LV    +     +   +  K+   G  PD + F
Sbjct: 291 GKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTF 350

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            ++I+     G V++  +++++M   G  P   TY+ LI     + K    LK  +L+ Q
Sbjct: 351 TSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINA---LCKENRLLKARELLGQ 407

Query: 128 --DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
              K++ P    YN ++  +C    + EA  +V +M     +PD +T+  L   +   G 
Sbjct: 408 LASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGR 467

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
            + A  +  +M      P++ T   ++S   K G  ++A
Sbjct: 468 MFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506


>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 207/413 (50%), Gaps = 8/413 (1%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M  L   G    A  +F+C+  +G  P       LV++  R  +  S  + +++V   G+
Sbjct: 116 MRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGI 175

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           K    ++N ++N   +   VDEA+ +F++  +    P   ++N LI+G   +G+ +++ +
Sbjct: 176 KVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFE 235

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK-MVASGIQPDAVTYNTLARA 179
             Q M  +    P+  +YN L+  +C  N I +  +++ + M+  G+ PD +TY ++   
Sbjct: 236 FFQNMG-NFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISG 294

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           Y + G+   A ++  EM ++ ++PN+ T  +++ G+ K GNM  AM    +M  L   P+
Sbjct: 295 YCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPD 354

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQE 296
           +V F SLI G+        V++ L L EE  V+   P+V T++ +++A      + + + 
Sbjct: 355 VVTFTSLIDGYCR---EGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARN 411

Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
               +  + + P   +++ +  G+ +AG+  +A  I+  M++    P+ + FT +I G C
Sbjct: 412 FLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNC 471

Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
              +M  A+S + KM EI   P+  T  +L+    +A  P  A ++ Q   +K
Sbjct: 472 MKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 186/415 (44%), Gaps = 2/415 (0%)

Query: 28  TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIF 87
           T  TY  L+  L +     S   +   +  DG+ PDS +   ++++ +  G +D A    
Sbjct: 108 TFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFL 167

Query: 88  QKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
            ++   G K +   YN L+         +E++ L +   +   V P+  ++NIL+R  C 
Sbjct: 168 NEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFV-PDVYSFNILIRGLCR 226

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE-MQNNQVRPNER 206
              I++A+     M   G  PD V+YNTL   + +  E  +   +L E M    V P+  
Sbjct: 227 IGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVI 286

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   I+SGYCK G+M+ A      M    + PN   FN LI GF  + +          M
Sbjct: 287 TYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKM 346

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
              G  PDVVTF++++D +   G + +  +++++M    + P+++ +++L     +    
Sbjct: 347 LLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRI 406

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
           ++A + L  ++   V P   ++  VI G+C A K+  A  I  +M E    P+  T+  L
Sbjct: 407 REARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTIL 466

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
           + G     +   A      M E    P + TI  +       G+  EA ++ ++A
Sbjct: 467 IIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAA 521



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 168/355 (47%), Gaps = 3/355 (0%)

Query: 98  TTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNV 157
           T +TY+ L++    VG  + +  +   M  D  + P+     +LV ++     ++ A N 
Sbjct: 108 TFNTYDLLMRNLCKVGLNDSAKIVFDCMRSD-GILPDSSILELLVSSYARMGKLDSAKNF 166

Query: 158 VYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCK 217
           + ++   GI+     YN L     +      A  +  E       P+  +  I++ G C+
Sbjct: 167 LNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCR 226

Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD-SDGVDKALTLMEEFGVKPDVV 276
            G ++ A  F   M      P++V +N+LI GF  + + S G D     M   GV PDV+
Sbjct: 227 IGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVI 286

Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
           T+++I+  +   G M    E+FD+MV +GI+P+   F++L  G+ + G  + A  +   M
Sbjct: 287 TYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKM 346

Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
              G  P+VV FT++I G+C   ++ + + ++E+M    ++PN+ TY  L+    +  + 
Sbjct: 347 LLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRI 406

Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
             A   L+ ++   V PK      V D +   G   EA  ++   +E ++  P+K
Sbjct: 407 REARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQE-KKCRPDK 460



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 162/333 (48%), Gaps = 6/333 (1%)

Query: 115 PEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK-MVASGIQPDAVTY 173
           P   LK  +      ++     TY++L+R  C K  + ++  +V+  M + GI PD+   
Sbjct: 89  PLLGLKFFEFSRTHLSINHTFNTYDLLMRNLC-KVGLNDSAKIVFDCMRSDGILPDSSIL 147

Query: 174 NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
             L  +YA+ G+   A+  L E+    ++ +      +++   K+  +++A+       E
Sbjct: 148 ELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLE 207

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
               P++  FN LI+G   I + D   +    M  FG  PD+V+++T+++ +     + K
Sbjct: 208 PYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISK 267

Query: 294 CQEIF-DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
             ++  +DM+  G+ PD+  ++ +  GY + G+ + A  +   M   G+ PN   F  +I
Sbjct: 268 GHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLI 327

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
            G+     M+ AM +YEKM  +G  P++ T+ +L+ GY    +  +  +L + M+ + + 
Sbjct: 328 DGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLS 387

Query: 413 PKKSTIQLVADSWRAIGLAREAK---RVLKSAE 442
           P   T  ++ ++       REA+   R LKS+E
Sbjct: 388 PNVYTYAVLINALCKENRIREARNFLRHLKSSE 420



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 54/131 (41%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L  + +  EA      L      P    Y  ++    +  +      +++++++   
Sbjct: 397 INALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKC 456

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD I F  +I      G + EA+  F KM +  C P   T N+LI      G P E+ +
Sbjct: 457 RPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQ 516

Query: 121 LLQLMSQDKNV 131
           + Q   Q  N+
Sbjct: 517 IKQAALQKLNL 527


>gi|359495888|ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 198/424 (46%), Gaps = 2/424 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L  +GK   A ++ N +I++G  P ++T+  LV  L +    +   +L+ ++ + G  P+
Sbjct: 141 LCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPN 200

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              FN  I     + NVD+A+ +F  M +SG  P   TYN LI      G  +++ KLL+
Sbjct: 201 CATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLE 260

Query: 124 LMSQDKNVKPNDR--TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
            +  D   K      T  I +     K  + +A     +M+  G Q D V YN L   + 
Sbjct: 261 KILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFC 320

Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
              +   A +   EM    + P+  T   ++SG+CK GN+++A      M ++   P+L+
Sbjct: 321 LIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLI 380

Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            +  +I+G     D    ++ L  M E  + P+ + ++ ++D     G +     I D M
Sbjct: 381 SYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQM 440

Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
           V  GI P++  ++ L    ++ G    A SI   M   G++P+VV +  +I   CN  ++
Sbjct: 441 VSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRI 500

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
             A+ +Y++M   G  P++ TY  L+ G+        AEELL  ++  G+    +  Q++
Sbjct: 501 HFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAPFQIL 560

Query: 422 ADSW 425
              +
Sbjct: 561 IQKY 564



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 137/290 (47%), Gaps = 9/290 (3%)

Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
           ++R  C +  +  A  +  KM+  G+ PD +T+N L     + G+  +A+ ++ EM    
Sbjct: 137 MIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIG 196

Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI-----KGFLDIKD 255
             PN  T    + GYC   N++ A+     M    + PN V +N LI     KG L  KD
Sbjct: 197 PSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLL--KD 254

Query: 256 SDGVDKALTLMEEFGVK-PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
           +  + + + L ++ G +  D++T +  MD     G M +    +D+M++ G + D+  ++
Sbjct: 255 ARKLLEKI-LDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYN 313

Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
           +L  G+    +   A      M K G+ P++  + T+ISG+C    +  A  I+  M ++
Sbjct: 314 VLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKM 373

Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
           G  P+L +Y+ ++ G        RA + L  M E  + P+     +V D 
Sbjct: 374 GAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDG 423



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 88/402 (21%), Positives = 157/402 (39%), Gaps = 68/402 (16%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           +S +F  + NAC ES   D A +IF  +     KP  S  N    G+GN         LL
Sbjct: 9   ESHVFFRLFNACIESIKHDVA-QIFANVFSF--KPY-SPANNRPSGHGN---------LL 55

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKN---SIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
               +D  +   ++ Y +  + W S+N     E    VV+ ++      DA+  ++L R 
Sbjct: 56  PFALEDLIISVGNQ-YQVTTQDWFSQNKGHDEERDPRVVFNVL------DAILKDSLERL 108

Query: 180 YAQYGETYRAEQMLFEMQNN--QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
                +  R    L ++  N   +  +   C  ++   C EG +  A+    +M +  V 
Sbjct: 109 -----KMMRESVSLTKIGLNGCTLEMDYTGCVAMIRNLCLEGKLRAALWLRNKMIQKGVI 163

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
           P+++  N L+ G     D +  D  +  M E G  P+  TF+T +  +     + K   +
Sbjct: 164 PDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATFNTFIKGYCLNNNVDKALYL 223

Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL------------------------ 333
           F  M  +GI P+   ++IL     + G  + A  +L                        
Sbjct: 224 FSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILDDDCGKETSDIITSTIFMDG 283

Query: 334 --------------TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
                           M + G   +VV +  +I G+C    M  A   + +M + G+ P+
Sbjct: 284 CLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPD 343

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           + TY TL+ G+ +      A  +  VM + G  P   + +++
Sbjct: 344 IFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYKMI 385



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 63/121 (52%)

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+ + A  +   M + GV P+V+    +++G C A  +++A ++  +M EIG +PN  T+
Sbjct: 145 GKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATF 204

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
            T + GY       +A  L   M   G+ P K T  ++  +    GL ++A+++L+   +
Sbjct: 205 NTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILD 264

Query: 444 D 444
           D
Sbjct: 265 D 265


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/496 (23%), Positives = 220/496 (44%), Gaps = 58/496 (11%)

Query: 5   VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
           +GKG+      I + ++ EG  P    + +LV A  + + +     L  K+ K G +P  
Sbjct: 318 LGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGY 377

Query: 65  ILFNAMINA-CSE----------------------------------------SGNVDEA 83
           +L+N  I + CS                                         +G  D+A
Sbjct: 378 LLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKA 437

Query: 84  MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
            +I  +M   G  P  STY+ +I    +  K E++  L + M ++  + P+  TY IL+ 
Sbjct: 438 FEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKN-GIVPSVYTYTILID 496

Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
           ++C    I++A N   +M+     P+ VTY +L  AY +  + + A ++   M     +P
Sbjct: 497 SFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKP 556

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMK------ELEVH----------PNLVVFNSLI 247
           N  T   ++ G+CK G ++ A +   RM+      +++++          PN++ + +L+
Sbjct: 557 NVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALV 616

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G       +   + L  M   G +P+ + +  ++D +   G +   QE+F  M + G  
Sbjct: 617 DGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYC 676

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P+++ +S L     +         +L+ M +    PNVV++T +I G C   K + A  +
Sbjct: 677 PNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRL 736

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
             KM E+G  PN+ TY  ++ G+G+  +  +  EL + M  KG  P   T +++ +   +
Sbjct: 737 MLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCS 796

Query: 428 IGLAREAKRVLKSAEE 443
            GL  EA R+L   ++
Sbjct: 797 TGLLDEAHRLLDEMKQ 812



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 202/442 (45%), Gaps = 29/442 (6%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P ++TY  L++    + +      ++S +  +G  P+  +FN++++A  +S +   A K+
Sbjct: 305 PNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKL 364

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE--SLKLLQLMSQ------DKNVKPNDRTY 138
           F+KM   GC+P    YN  I   G++   EE     LL+L  +      D  V  N    
Sbjct: 365 FKKMIKCGCQPGYLLYNIFI---GSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNV 421

Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
           +   R  C     ++A+ ++ +M++ G  PD  TY+ +        +  +A  +  EM+ 
Sbjct: 422 SNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKK 481

Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
           N + P+  T  I++  +CK G ++ A  +   M      PN+V + SLI  +L  +    
Sbjct: 482 NGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFD 541

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE----------- 307
            +K   +M   G KP+VVT++ ++D    AG + K  +I+  M +  IE           
Sbjct: 542 ANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARM-QGDIESSDIDMYFKLD 600

Query: 308 ------PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
                 P+I  +  L  G  +A   ++A  +L +M   G  PN +++  +I G+C   K+
Sbjct: 601 DNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKL 660

Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
           + A  ++ KM E G  PNL TY +L+    + K+     ++L  M E    P       +
Sbjct: 661 ENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDM 720

Query: 422 ADSWRAIGLAREAKRVLKSAEE 443
            D    +G   EA R++   EE
Sbjct: 721 IDGLCKVGKTEEAYRLMLKMEE 742



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/385 (24%), Positives = 180/385 (46%), Gaps = 22/385 (5%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L G GK  +A  I   ++ +G  P   TY+ ++  L    + +    L  +++K+G+ P 
Sbjct: 428 LCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPS 487

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
              +  +I++  ++G + +A   F +M    C P   TY +LI  Y    K  ++ KL +
Sbjct: 488 VYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFE 547

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
           +M  + + KPN  TY  L+   C    I++A  +  +M     Q D  + +         
Sbjct: 548 MMLLEGS-KPNVVTYTALIDGHCKAGQIDKACQIYARM-----QGDIESSDI-------- 593

Query: 184 GETYRAEQMLFEMQNNQVR-PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                   M F++ +N    PN  T G +V G CK   +E+A   L  M      PN +V
Sbjct: 594 -------DMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIV 646

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           +++LI GF      +   +    M E G  P++ T+S+++++      +    ++   M+
Sbjct: 647 YDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKML 706

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           +    P++ +++ +  G  + G+ ++A  ++  M + G +PNV+ +T +I G+    K++
Sbjct: 707 ENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIE 766

Query: 363 RAMSIYEKMCEIGINPNLKTYETLL 387
           + + +Y  MC  G  PN  TY  L+
Sbjct: 767 QCLELYRDMCSKGCAPNFITYRVLI 791



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 108/493 (21%), Positives = 214/493 (43%), Gaps = 56/493 (11%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +  L    K  +A  +F  + + G  P++ TYT L+ +  +    +   +   ++ +D  
Sbjct: 460 IGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNC 519

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+ + + ++I+A  ++  V +A K+F+ M   G KP   TY  LI G+   G+ +++ +
Sbjct: 520 TPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQ 579

Query: 121 LLQLMSQDKNVK---------------PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG 165
           +   M  D                   PN  TY  LV   C  N +EEA  ++  M  +G
Sbjct: 580 IYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNG 639

Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAM 225
            +P+ + Y+ L   + + G+   A+++  +M      PN  T   +++   KE  ++  +
Sbjct: 640 CEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVL 699

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           + L +M E    PN+V++  +I G   +  ++   + +  MEE G  P+V+T++ ++D +
Sbjct: 700 KVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGF 759

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK--YGVH- 342
              G + +C E++ DM   G  P+   + +L       G   +A  +L  M++  +  H 
Sbjct: 760 GKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHI 819

Query: 343 ------------------------------PNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
                                         P   ++  +I  +  A +++ A+++ E   
Sbjct: 820 SSYRKIIEGFNREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLE--- 876

Query: 373 EIGINPNLKT-----YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           EI  +P+L       Y +L+     A +  +A EL   M  K V P+ ST   +      
Sbjct: 877 EISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTR 936

Query: 428 IGLAREAKRVLKS 440
           +G  +EA ++  S
Sbjct: 937 VGKWQEALQLSDS 949



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/419 (23%), Positives = 182/419 (43%), Gaps = 10/419 (2%)

Query: 35  LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
           L+    R   +   L  + +++  G K     +NA+I     +  +D A  + ++M +SG
Sbjct: 176 LIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSG 235

Query: 95  CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
            +    T           G+  ++L LL+     +   P+   YN +V   C  +  +EA
Sbjct: 236 FRMDGCTLGCFAYSLCKAGRCGDALSLLE----KEEFVPDTVFYNRMVSGLCEASLFQEA 291

Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
            +++ +M +    P+ VTY  L       G+  R +++L  M      PN      +V  
Sbjct: 292 MDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHA 351

Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD------KALTLMEE 268
           YCK  +   A +   +M +    P  +++N  I      ++  G D      KA + M +
Sbjct: 352 YCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLD 411

Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
            GV  + V  S        AG   K  EI  +M+  G  PD   +S +      A + +K
Sbjct: 412 LGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEK 471

Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
           A  +   M+K G+ P+V  +T +I  +C A  +Q+A + +++M      PN+ TY +L+ 
Sbjct: 472 AFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIH 531

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQS 447
            Y +A++ + A +L ++M  +G +P   T   + D     G   +A ++    + D +S
Sbjct: 532 AYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIES 590



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 169/361 (46%), Gaps = 38/361 (10%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P +ITY  LV  L +  R +    L+  +  +G +P+ I+++A+I+   ++G ++ A ++
Sbjct: 607 PNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEV 666

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F KM + G  P   TY++LI       + +  LK+L  M ++ +  PN   Y  ++   C
Sbjct: 667 FVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLEN-SCTPNVVIYTDMIDGLC 725

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                EEA+ ++ KM   G  P+ +TY  +   + + G+  +  ++  +M +    PN  
Sbjct: 726 KVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFI 785

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF----------LD-IKD 255
           T  ++++  C  G +++A R L  MK+     ++  +  +I+GF          LD + +
Sbjct: 786 TYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGLLDELSE 845

Query: 256 SDGV-------------------DKALTLMEEFGVKPDVVT-----FSTIMDAWSSAGLM 291
           ++ V                   + AL L+EE    P +       +++++++ S A  +
Sbjct: 846 NESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKV 905

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH--PNVVMFT 349
            K  E++  M+   + P++  F  L KG  R G+ Q+A  +  S+ +   H   N V + 
Sbjct: 906 DKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSICQMVCHVCSNFVNYK 965

Query: 350 T 350
           T
Sbjct: 966 T 966


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 202/427 (47%), Gaps = 19/427 (4%)

Query: 10  PHEAHYIFNCLIEEGH-RPTLITYTTLVAALTRQKR---------FKSILSLISKVEKDG 59
           PH A  + + L      RP+L     +++AL R            F+SI++L        
Sbjct: 147 PHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVAL-------R 199

Query: 60  MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
           + P+   FN +++     G + +A+     M+  G  P   TYNTL+  +   G   E+ 
Sbjct: 200 LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 259

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
            LL  M +D  V P   TYN LV A+     I++A  VV  M A+G +PD  TYN LA  
Sbjct: 260 ALLARMKKD-GVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAG 318

Query: 180 YAQYGETYRAEQMLFEMQN-NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
             Q G+   A ++  EM+    + P+  T   +     K     DA+R L  M+E  V  
Sbjct: 319 LCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKA 378

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
            LV  N +IKG     + +G    L  M + G+ PDV+T++T++ A   AG + K   + 
Sbjct: 379 TLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLM 438

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           D+MV+ G++ D    + +     +    ++A+ +L S  + G  P+ V + TV++ +   
Sbjct: 439 DEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKE 498

Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
              + A+ ++++M E  + P++ TY TL+ G     +   A + L  + EKG+ P  +T 
Sbjct: 499 YNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTY 558

Query: 419 QLVADSW 425
            ++  ++
Sbjct: 559 NIIIHAY 565



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 113/444 (25%), Positives = 209/444 (47%), Gaps = 2/444 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N    KG   EA  +   + ++G  PT  TY TLV+A  R    K    ++  +  +G 
Sbjct: 246 LNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGF 305

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCK-PTTSTYNTLIKGYGNVGKPEESL 119
           +PD   +N +     ++G VDEA ++  +M+  G   P   TYNTL           ++L
Sbjct: 306 EPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDAL 365

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
           +LL+ M ++K VK    T+NI+++  C    +E A   + KM   G+ PD +TYNTL  A
Sbjct: 366 RLLEEM-REKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHA 424

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
           + + G   +A  ++ EM    ++ +  T   ++   CKE   E+A   L    +    P+
Sbjct: 425 HCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPD 484

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
            V + +++  +    +S+   +    M E  + P + T++T++   S  G + +  +  +
Sbjct: 485 EVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLN 544

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
           ++++ G+ PD   ++I+   Y + G+ + A      M +    P+VV   T+++G C   
Sbjct: 545 ELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNG 604

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
           K+ +A+ ++E   E G   ++ TY TL+    +      A      ME +G++P   T  
Sbjct: 605 KLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYN 664

Query: 420 LVADSWRAIGLAREAKRVLKSAEE 443
           +V  +    G   EA+ +L    E
Sbjct: 665 VVLSALSEAGRTEEAQNMLHKLAE 688



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 203/439 (46%), Gaps = 58/439 (13%)

Query: 11  HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
           H  HY FN L+      T  +  TL  AL          S +S ++  G+ PD++ +N +
Sbjct: 201 HPNHYTFNLLVH-----THCSKGTLADAL----------STLSTMQGFGLSPDAVTYNTL 245

Query: 71  INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
           +NA    G + EA  +  +MK  G  PT  TYNTL+  Y  +G  +++ K+++ M+ +  
Sbjct: 246 LNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTAN-G 304

Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG-IQPDAVTYNTLARAYAQYGETYRA 189
            +P+  TYN+L    C    ++EA+ +  +M   G + PD VTYNTLA A  +   +  A
Sbjct: 305 FEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDA 364

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
            ++L EM+   V+    T  I++ G CK+G +E A+  L +M +  + P+++ +N+LI  
Sbjct: 365 LRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHA 424

Query: 250 FLDIKDSDGVDKALTLMEEF--------------------------------------GV 271
                 +  + KA TLM+E                                       G 
Sbjct: 425 HC---KAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGF 481

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
            PD V++ T+M A+           ++D+M++  + P I  ++ L KG  R G  ++A  
Sbjct: 482 MPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAID 541

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
            L  + + G+ P+   +  +I  +C    ++ A   + KM E    P++ T  TL+ G  
Sbjct: 542 KLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLC 601

Query: 392 EAKQPWRAEELLQVMEEKG 410
              +  +A +L +   EKG
Sbjct: 602 LNGKLDKALKLFESWVEKG 620



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 201/407 (49%), Gaps = 44/407 (10%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
           E+G + TL+T+  ++  L +    +  L  ++K+  DG+ PD I +N +I+A  ++GN+ 
Sbjct: 373 EKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIA 432

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           +A  +  +M   G K  T T NT++       + EE+  LLQ   Q +   P++ +Y  +
Sbjct: 433 KAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQ-RGFMPDEVSYGTV 491

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           + A+  + + E A  +  +M+   + P   TYNTL +  ++ G    A   L E+    +
Sbjct: 492 MAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGL 551

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF-LDIKDSDGVD 260
            P++ T  II+  YCKEG++E+A +F  +M E    P++V  N+L+ G  L+ K    +D
Sbjct: 552 VPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGK----LD 607

Query: 261 KALTLME---EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
           KAL L E   E G K DV+T++T++      G +      F DM   G++PD   ++++ 
Sbjct: 608 KALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVL 667

Query: 318 KGYVRAGEPQKAESILTSMRKYG----------VHPNVV--------------------- 346
                AG  ++A+++L  + + G          + P+ V                     
Sbjct: 668 SALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQD 727

Query: 347 ----MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
                +T +++G C + + + A +I ++M + G++ +  TY TL+ G
Sbjct: 728 SASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEG 774



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 165/361 (45%), Gaps = 4/361 (1%)

Query: 94  GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC--SKNSI 151
           G  P+T   +  +  Y  +  P  + +LL  + +   V+P+ +  N ++ A       S 
Sbjct: 126 GNLPSTPLADAALSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSP 185

Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
           + + +    +VA  + P+  T+N L   +   G    A   L  MQ   + P+  T   +
Sbjct: 186 QASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTL 245

Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
           ++ +C++G + +A   L RMK+  V P    +N+L+  +  +       K +  M   G 
Sbjct: 246 LNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGF 305

Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG-IEPDIHVFSILAKGYVRAGEPQKAE 330
           +PD+ T++ +      AG + +   + D+M + G + PD+  ++ LA    +      A 
Sbjct: 306 EPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDAL 365

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
            +L  MR+ GV   +V    VI G C   +++ A+    KM + G+ P++ TY TL+  +
Sbjct: 366 RLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAH 425

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            +A    +A  L+  M  +G++    T+  V  +        EA+ +L+S  + R  MP+
Sbjct: 426 CKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQ-RGFMPD 484

Query: 451 K 451
           +
Sbjct: 485 E 485



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 92/180 (51%), Gaps = 9/180 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L   GK  +A  +F   +E+G +  +ITY TL+  + +     + L   + +E  G+
Sbjct: 597 MNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGL 656

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           +PD+  +N +++A SE+G  +EA  +  K+ +SG    + ++++ +    +V + E    
Sbjct: 657 QPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGT--LSQSFSSPLLKPSSVDEAESG-- 712

Query: 121 LLQLMSQDKNVK-PND---RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
                ++++ V+ P D     Y  LV   C+    +EA  ++ +M+  G+  D+ TY TL
Sbjct: 713 -KDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITL 771


>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 711

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 201/427 (47%), Gaps = 3/427 (0%)

Query: 20  LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
           L+ +    T +TY  L+ A  R    +  L+LIS++ +DG + D + ++ +I + +    
Sbjct: 190 LLSQKQTLTPLTYNALIGACARNNDIEKALNLISRMRQDGYQSDFVNYSLVIQSLTRCNK 249

Query: 80  VDEAM--KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRT 137
           +D  M  +++++++    +      N +I G+   G P  +L+LL  M+Q   +     T
Sbjct: 250 IDSVMLQRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSRALQLLG-MAQATGLSAKTAT 308

Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
              ++ A  +     EA  +  ++  SGI+P    YN L + Y + G    AE M+ EM+
Sbjct: 309 LVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEME 368

Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
              V P+E T  +++  Y   G  E A   L  M+  +V PN  VF+ L+ G+ D  +  
Sbjct: 369 KRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQ 428

Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
              + L  M+  GVKPD   ++ ++D +     +      FD M+  GIEPD   ++ L 
Sbjct: 429 KTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI 488

Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
             + + G    AE +  +M + G  P    +  +I+ + +  +      +  KM   GI 
Sbjct: 489 DCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL 548

Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
           PN+ T+ TL+  YG++ +   A E L+ M+  G++P  +    + +++   GL+ +A   
Sbjct: 549 PNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNA 608

Query: 438 LKSAEED 444
            +    D
Sbjct: 609 FRVMTSD 615



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 196/399 (49%), Gaps = 1/399 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G+  EA  +F  L + G +P    Y  L+    +    K    ++S++EK G+
Sbjct: 313 ISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGV 372

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            PD   ++ +I+A   +G  + A  + ++M+    +P +  ++ L+ GY + G+ +++ +
Sbjct: 373 SPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQ 432

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           +L+ M +   VKP+ + YN+++  +   N ++ A     +M++ GI+PD VT+NTL   +
Sbjct: 433 VLKEM-KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 491

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            ++G    AE+M   M+     P   T  I+++ Y  +   +D  R L +MK   + PN+
Sbjct: 492 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 551

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V   +L+  +      +   + L  M+  G+KP    ++ +++A++  GL  +    F  
Sbjct: 552 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 611

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M   G++P +   + L   +       +A ++L  M++ GV P+VV +TT++       K
Sbjct: 612 MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDK 671

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
            Q+   +YE+M   G  P+ K    L       KQ  RA
Sbjct: 672 FQKVPGVYEEMIMSGCKPDRKARSMLRSALRYMKQTLRA 710



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/425 (24%), Positives = 202/425 (47%), Gaps = 3/425 (0%)

Query: 22  EEGHRPTLITYTTLVAALTRQKRFKSIL--SLISKVEKDGMKPDSILFNAMINACSESGN 79
           ++G++   + Y+ ++ +LTR  +  S++   L  ++E+D ++ D  L N +I   ++SG+
Sbjct: 227 QDGYQSDFVNYSLVIQSLTRCNKIDSVMLQRLYKEIERDKLELDVQLVNDIIMGFAKSGD 286

Query: 80  VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
              A+++    + +G    T+T  ++I    N G+  E+  L + + Q   +KP  + YN
Sbjct: 287 PSRALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAEALFEELRQ-SGIKPRTKAYN 345

Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
            L++ +     +++A  +V +M   G+ PD  TY+ L  AY   G    A  +L EM+  
Sbjct: 346 ALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETG 405

Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
            V+PN      +++GY   G  +   + L  MK + V P+   +N +I  F      D  
Sbjct: 406 DVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA 465

Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
                 M   G++PD VT++T++D     G     +E+F+ M + G  P    ++I+   
Sbjct: 466 MTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINS 525

Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
           Y         + +L  M+  G+ PNVV  TT++  +  + +   A+   E+M  +G+ P+
Sbjct: 526 YGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPS 585

Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
              Y  L+  Y +     +A    +VM   G++P    +  + +++       EA  VL+
Sbjct: 586 STMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQ 645

Query: 440 SAEED 444
             +E+
Sbjct: 646 YMKEN 650



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/241 (19%), Positives = 101/241 (41%), Gaps = 8/241 (3%)

Query: 214 GYCKEGN-MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV--DKALTLMEEFG 270
           G C   N +E A+  + RM++     + V ++ +I+        D V   +    +E   
Sbjct: 207 GACARNNDIEKALNLISRMRQDGYQSDFVNYSLVIQSLTRCNKIDSVMLQRLYKEIERDK 266

Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
           ++ DV   + I+  ++ +G   +  ++       G+         +      +G   +AE
Sbjct: 267 LELDVQLVNDIIMGFAKSGDPSRALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAE 326

Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
           ++   +R+ G+ P    +  ++ G+     ++ A  +  +M + G++P+  TY  L+  Y
Sbjct: 327 ALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAY 386

Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK-----SAEEDR 445
             A +   A  +L+ ME   V+P       +   +R  G  ++  +VLK       + DR
Sbjct: 387 VNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDR 446

Query: 446 Q 446
           Q
Sbjct: 447 Q 447


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 201/438 (45%), Gaps = 6/438 (1%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           L   G+   A  +   L   G +PT++TY  L+ AL R  R +    L  ++ +  ++P 
Sbjct: 226 LCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPS 285

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            + F  +IN  +      E   + Q+M+  G  P    YN LI  +   G   E+L+L  
Sbjct: 286 IVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFD 345

Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ- 182
            M   K +K    TYN++ +A C +  +E A  ++ +M+ +G+      +N++   + + 
Sbjct: 346 EMVS-KGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRG 404

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR--FLYRMKELEVHPNL 240
            G      +++ EM    ++PN+      +   CK G  E+A    FL   K L V  N+
Sbjct: 405 TGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGV--NI 462

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
              N+LI G     +     K L  M + GV+ D +T++ ++     A  M +  ++ DD
Sbjct: 463 ATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDD 522

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+K G +PD+  F+   + Y   G+ +    +L  M+  G+ P++V + T+I G+C A  
Sbjct: 523 MIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKD 582

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           + +A     ++ + G+ PN   Y  L+ GYG       A  +L  M+  G++P   T   
Sbjct: 583 VHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNS 642

Query: 421 VADSWRAIGLAREAKRVL 438
           +       GL  EAK + 
Sbjct: 643 LMYWMCHAGLVEEAKEIF 660



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 209/434 (48%), Gaps = 47/434 (10%)

Query: 2   NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQK-------------- 43
           N L+G    +G   EA  +F+ ++ +G + T++TY  +  AL ++               
Sbjct: 325 NQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLL 384

Query: 44  ----------------------RFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVD 81
                                 R   +L LI ++    +KP+  +  A I    + G  +
Sbjct: 385 AGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHE 444

Query: 82  EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
           EA +I+  +   G     +T N LI G       +E+ K+L+ M  D  V+ +  TYNI+
Sbjct: 445 EAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMV-DSGVEFDRITYNIM 503

Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
           ++  C  + +EEA  +   M+  G +PD  T+NT  RAY   G+      +L +M++  +
Sbjct: 504 IQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGL 563

Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL---DIKDSDG 258
           +P+  T G I+ GYCK  ++  A ++L  + +  + PN V++N+LI G+     I D+ G
Sbjct: 564 KPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIG 623

Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
           V   L  M+  G++P  +T++++M     AGL+ + +EIF   +   IE  +  ++I+ +
Sbjct: 624 V---LDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQ 680

Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
           G+ + G+  +A      M    + PN + +TT++  +C     + A  ++++M   GI P
Sbjct: 681 GFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVP 740

Query: 379 NLKTYETLLWGYGE 392
           +  +Y TL+ G  E
Sbjct: 741 DTVSYNTLISGCCE 754



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/484 (23%), Positives = 211/484 (43%), Gaps = 72/484 (14%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   G+  EA  +   ++E   RP+++T+  L+  L R +RF  + +++ ++E  G+
Sbjct: 258 MDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGI 317

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES-- 118
            P+ +++N +I      G+  EA+++F +M   G K T  TYN + K     G+ E +  
Sbjct: 318 TPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQ 377

Query: 119 ----------------------------------LKLLQLMSQDKNVKPNDRTYNILVRA 144
                                             L+L++ M   + +KPND      ++ 
Sbjct: 378 ILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVA-RFLKPNDAVMTACIQE 436

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
            C +   EEA  + + ++  G+  +  T N L     Q      A ++L  M ++ V  +
Sbjct: 437 LCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFD 496

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T  I++   CK   ME+A++    M +    P+L  FN+ ++ + ++   + +   L 
Sbjct: 497 RITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLD 556

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M+  G+KPD+VT+ TI+D +  A  + K  +   +++K G+ P+  +++ L  GY R G
Sbjct: 557 QMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNG 616

Query: 325 EPQKAESILTSMRKYGVHPN-----------------------------------VVMFT 349
               A  +L +M+  G+ P                                    V+ +T
Sbjct: 617 SISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYT 676

Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
            +I G+C   K+  A+  +++M    I PN  TY TL++ Y +      A +L   M   
Sbjct: 677 IIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSS 736

Query: 410 GVRP 413
           G+ P
Sbjct: 737 GIVP 740



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 211/498 (42%), Gaps = 77/498 (15%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P + TYT ++ AL R     +   +++++E+ G++P  + +N +++A   SG V+EA ++
Sbjct: 214 PDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQL 273

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
             +M +   +P+  T+  LI G     +  E   +LQ M +   + PN+  YN L+   C
Sbjct: 274 KGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEM-EGFGITPNEVIYNQLIGWHC 332

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML------------- 193
            +    EA  +  +MV+ GI+   VTYN +A+A  + GE   AEQ+L             
Sbjct: 333 REGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCS 392

Query: 194 -----------------------FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR--FL 228
                                   EM    ++PN+      +   CK G  E+A    FL
Sbjct: 393 LFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFL 452

Query: 229 YRMKELEVHPNLVVFNSLIKGFL---DIKDSDGVDKALT------------LMEEF---- 269
              K L V  N+   N+LI G     ++K++  V KA+             +M +F    
Sbjct: 453 VLGKGLGV--NIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKA 510

Query: 270 ----------------GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
                           G KPD+ TF+T + A+ + G +     + D M   G++PDI  +
Sbjct: 511 SKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTY 570

Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
             +  GY +A +  KA   L  + K G+ PN V++  +I G+     +  A+ + + M  
Sbjct: 571 GTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKH 630

Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
            GI P   TY +L++    A     A+E+      K +        ++   +  IG   E
Sbjct: 631 NGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDE 690

Query: 434 AKRVLKSAEEDRQSMPNK 451
           A    K     R   PNK
Sbjct: 691 AVMYFKEMHY-RDIRPNK 707



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 165/361 (45%), Gaps = 10/361 (2%)

Query: 68  NAMINACSES---GNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
           + ++ AC  S   G++  A   F ++   G  P+  T N L++  G  G+ + + K+   
Sbjct: 146 DLLVRACLNSPAPGSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGE 205

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           M     V P+  TY ++++A C    I+ A+ ++ ++  SGIQP  VTYN L  A  + G
Sbjct: 206 MRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSG 265

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
               A Q+   M   ++RP+  T GI+++G  +     +    L  M+   + PN V++N
Sbjct: 266 RVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYN 325

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
            LI             +AL L +E    G+K  VVT++ I  A    G M   ++I D+M
Sbjct: 326 QLIGWHC---REGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEM 382

Query: 302 VKAGIEPDIHVFSILAKGYVRA-GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           + AG+     +F+ +   ++R  G       ++  M    + PN  + T  I   C   K
Sbjct: 383 LLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGK 442

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
            + A  I+  +   G+  N+ T   L+ G  +      A ++L+ M + GV   + T  +
Sbjct: 443 HEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNI 502

Query: 421 V 421
           +
Sbjct: 503 M 503



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 128/253 (50%), Gaps = 4/253 (1%)

Query: 9   KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
           K  EA  + + +I+ G +P L T+ T + A     + + IL L+ +++ +G+KPD + + 
Sbjct: 512 KMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYG 571

Query: 69  AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
            +I+   ++ +V +A K   ++  +G +P    YN LI GYG  G   +++ +L  M  +
Sbjct: 572 TIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHN 631

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
             ++P   TYN L+   C    +EEA  +  + +   I+   + Y  + + + + G+   
Sbjct: 632 -GIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDE 690

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A     EM    +RPN+ T   ++  YCK GN E+A +    M    + P+ V +N+LI 
Sbjct: 691 AVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLIS 750

Query: 249 GFLDIKDSDGVDK 261
           G  ++   D +DK
Sbjct: 751 GCCEV---DSLDK 760



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 78/169 (46%)

Query: 270 GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKA 329
            V PDV T++ ++ A   AG +     +  ++ ++GI+P +  +++L     R+G  ++A
Sbjct: 211 AVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEA 270

Query: 330 ESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
             +   M +  + P++V F  +I+G     +     ++ ++M   GI PN   Y  L+  
Sbjct: 271 FQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGW 330

Query: 390 YGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
           +        A  L   M  KG++    T  L+A +    G    A+++L
Sbjct: 331 HCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQIL 379



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  EA   F  +     RP  +TYTTL+ A  +    +    L  ++   G+ PD++ +
Sbjct: 686 GKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSY 745

Query: 68  NAMINACSESGNVDE 82
           N +I+ C E  ++D+
Sbjct: 746 NTLISGCCEVDSLDK 760


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 215/435 (49%), Gaps = 11/435 (2%)

Query: 47  SILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLI 106
           ++L L++K+   G++P  +  N ++N     G+V+ A+ + +KM++ G      TY  L+
Sbjct: 131 AVLGLMTKI---GLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALV 187

Query: 107 KGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGI 166
            G   +G    +L+ L+ M + +N+ PN   YN ++   C +  + EA  ++++M    +
Sbjct: 188 NGLCKIGDTSGALECLKKMVK-RNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNV 246

Query: 167 QPDAVTYNTLARAYAQYGETYRAEQMLFE--MQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
           +P+ VTYN L +        +R    LF   +    + P+ +T  I+V G+CKEG +  A
Sbjct: 247 EPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRA 306

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM--EEFGVKPDVVTFSTIM 282
              +  M  + V PN+V +NSLI G+      +   +   LM  E  G  P VVT ++++
Sbjct: 307 ESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLI 366

Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
             W     + K   +  +MV  G++PD+  ++ L  G+    +P  A  +  +M+++G  
Sbjct: 367 HGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQV 426

Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
           PN+     V+ G         A++++  M + G++ ++  Y  +L G  +  +   A +L
Sbjct: 427 PNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKL 486

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKD-EIAVESIH 461
           L  +  KG++    T  ++       GL  +A+ +L+  +E+    PNK    + V+ + 
Sbjct: 487 LSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKEN-GCPPNKCSYNVFVQGLL 545

Query: 462 RKQNLSASNSTFLQI 476
           RK +++ S   +LQI
Sbjct: 546 RKYDIARSRK-YLQI 559



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 132/490 (26%), Positives = 229/490 (46%), Gaps = 23/490 (4%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L    K      +   + + G  PTL+T  T+V  L  +      L L+ K+E  G 
Sbjct: 117 INCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGY 176

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             ++  + A++N   + G+   A++  +KM      P    YN ++ G    G   E+L 
Sbjct: 177 HCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALG 236

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSK-NSIEEAWNVVYKMVAS-GIQPDAVTYNTLAR 178
           LL  M    NV+PN  TYN L++  C +     E   +  +MVA  GI PD  T++ L  
Sbjct: 237 LLHEMGV-VNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVD 295

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMR-FLYRMKELE-V 236
            + + G   RAE ++  M    V PN  T   +++GYC    ME+AMR F   ++E E  
Sbjct: 296 GFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGC 355

Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGK 293
            P++V  NSLI G+  +K+   VDKA++L+ E    G+ PDV T+++++  +        
Sbjct: 356 LPSVVTHNSLIHGWCKVKE---VDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLA 412

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
            +E+F  M + G  P++   +++  G ++     +A ++  +M K G+  ++V++  ++ 
Sbjct: 413 ARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLD 472

Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           G C   K+  A  +   +   G+  +  TY  ++ G         AEELL+ M+E G  P
Sbjct: 473 GMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPP 532

Query: 414 KKSTIQL-VADSWRAIGLAREAKRVLKSAEEDRQSMPNKK---DEIAVESIHRKQNLSAS 469
            K +  + V    R   +AR  K +        Q M +K    D    E + R  + +  
Sbjct: 533 NKCSYNVFVQGLLRKYDIARSRKYL--------QIMKDKGFPVDATTAELLIRFLSANEE 584

Query: 470 NSTFLQIPGV 479
           + +F + P +
Sbjct: 585 DKSFKEFPQI 594



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 193/412 (46%), Gaps = 55/412 (13%)

Query: 76  ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE---SLKLLQLMSQDKNVK 132
           E+ +   A+  F +M      P    +N L   +G V K +    ++ L++++    +  
Sbjct: 51  ETADAVVAVDFFHRMLTLTPFPCIQDFNLL---FGLVAKSQHYATAISLIKILHSLGDGS 107

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
            +  T NI +   C        + V+  M   G++P  VT NT+       G+   A  +
Sbjct: 108 ADVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWL 167

Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
           + +M+N     N RT G +V+G CK G+   A+  L +M +  + PN+VV+N+++ G   
Sbjct: 168 VEKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDG--- 224

Query: 253 IKDSDGVDKALTLMEEFG---VKPDVVTFSTIMDAWSSAGLMGKCQE---IFDDMV-KAG 305
           +     V +AL L+ E G   V+P+VVT++ ++      G  G  +E   +F++MV + G
Sbjct: 225 LCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGL--CGEFGGWREGVGLFNEMVAEKG 282

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS------------ 353
           I PD+  FSIL  G+ + G   +AES++  M + GV PNVV + ++I+            
Sbjct: 283 IVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAM 342

Query: 354 -------------------------GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
                                    GWC   ++ +AMS+  +M   G++P++ T+ +L+ 
Sbjct: 343 RVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIG 402

Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
           G+ E K+P  A EL   M+E G  P   T  +V D      L  EA  + ++
Sbjct: 403 GFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRA 454


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 178/365 (48%), Gaps = 2/365 (0%)

Query: 25  HRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAM 84
           H+P  +TY TL+   +  +   S+    S++EKDG  PD + F  +++A  ++GN  EA 
Sbjct: 324 HKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 383

Query: 85  KIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRA 144
                M+D G  P   TYNTLI G   V + +++L+L   M +   VKP   TY + +  
Sbjct: 384 DTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM-ESLGVKPTAYTYIVFIDY 442

Query: 145 WCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPN 204
           +        A     KM   GI P+ V  N    + A+ G    A+Q+ + +++  + P+
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502

Query: 205 ERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
             T  +++  Y K G +++A++ L  M E    P+++V NSLI         D   K   
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562

Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
            M+E  +KP VVT++T++      G + +  E+F+ MV+ G  P+   F+ L     +  
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 622

Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
           E   A  +L  M   G  P+V  + T+I G     +++ AM  + +M ++ + P+  T  
Sbjct: 623 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLC 681

Query: 385 TLLWG 389
           TLL G
Sbjct: 682 TLLPG 686



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 202/452 (44%), Gaps = 36/452 (7%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG   +A Y    + E G      +Y  L+  L + +     + +  ++  +G +P    
Sbjct: 166 KGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQT 225

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           +++++    +  ++D  M + ++M+  G KP   T+   I+  G  GK  E+ ++L+ M 
Sbjct: 226 YSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM- 284

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
            D+   P+  TY +L+ A C+   ++ A  V  KM     +PD VTY TL   ++   + 
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
              +Q   EM+ +   P+  T  I+V   CK GN  +A   L  M++  + PNL  +N+L
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           I G L +   D   +    ME  GVKP   T+   +D +  +G      E F+ M   GI
Sbjct: 405 ICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464

Query: 307 EPDIH-----------------------------------VFSILAKGYVRAGEPQKAES 331
            P+I                                     ++++ K Y + GE  +A  
Sbjct: 465 APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIK 524

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +L+ M + G  P+V++  ++I+    A ++  A  ++ +M E+ + P + TY TLL G G
Sbjct: 525 LLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLG 584

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
           +  +   A EL + M +KG  P   T   + D
Sbjct: 585 KNGKIQEAIELFEGMVQKGCPPNTITFNTLFD 616



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/438 (23%), Positives = 211/438 (48%), Gaps = 12/438 (2%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           + +L   GK +EA+ I   + +EG  P ++TYT L+ AL   ++      +  K++    
Sbjct: 265 IRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH 324

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           KPD + +  +++  S++ ++D   + + +M+  G  P   T+  L+      G   E+  
Sbjct: 325 KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFD 384

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
            L +M +D+ + PN  TYN L+      + +++A  +   M + G++P A TY      Y
Sbjct: 385 TLDVM-RDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYY 443

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G++  A +   +M+   + PN   C   +    K G   +A +  Y +K++ + P+ 
Sbjct: 444 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 503

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
           V +N ++K +  + + D   K L+ M E G +PDV+  +++++    A  + +  ++F  
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M +  ++P +  ++ L  G  + G+ Q+A  +   M + G  PN + F T+    C   +
Sbjct: 564 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 623

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI-- 418
           +  A+ +  KM ++G  P++ TY T+++G  +  Q   A      M +K V P   T+  
Sbjct: 624 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCT 682

Query: 419 --------QLVADSWRAI 428
                    L+ D+++ I
Sbjct: 683 LLPGVVKASLIEDAYKII 700



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 167/325 (51%), Gaps = 7/325 (2%)

Query: 24   GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
            G +P L TY  L+  L      +    +  +V+  G  PD   +N +++A  +SG +DE 
Sbjct: 780  GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839

Query: 84   MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
             +++++M    C+  T T+N +I G    G  +++L L   +  D++  P   TY  L+ 
Sbjct: 840  FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899

Query: 144  AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
                   + EA  +   M+  G +P+   YN L   + + GE   A  +   M    VRP
Sbjct: 900  GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959

Query: 204  NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
            + +T  ++V   C  G +++ + +   +KE  ++P++V +N +I G   +  S  +++AL
Sbjct: 960  DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIING---LGKSHRLEEAL 1016

Query: 264  TLMEEF----GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
             L  E     G+ PD+ T+++++     AG++ +  +I++++ +AG+EP++  F+ L +G
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076

Query: 320  YVRAGEPQKAESILTSMRKYGVHPN 344
            Y  +G+P+ A ++  +M   G  PN
Sbjct: 1077 YSLSGKPEHAYAVYQTMVTGGFSPN 1101



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 172/340 (50%), Gaps = 4/340 (1%)

Query: 50   SLISKVEKD-GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
            +L  K  KD G++P    +N +I    E+  ++ A  +F ++K +GC P  +TYN L+  
Sbjct: 770  TLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDA 829

Query: 109  YGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS-GIQ 167
            YG  GK +E  +L + MS  +  + N  T+NI++       ++++A ++ Y +++     
Sbjct: 830  YGKSGKIDELFELYKEMSTHE-CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFS 888

Query: 168  PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
            P A TY  L    ++ G  Y A+Q+   M +   RPN     I+++G+ K G  + A   
Sbjct: 889  PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACAL 948

Query: 228  LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSS 287
              RM +  V P+L  ++ L+     +   D        ++E G+ PDVV ++ I++    
Sbjct: 949  FKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGK 1008

Query: 288  AGLMGKCQEIFDDM-VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVV 346
            +  + +   +F++M    GI PD++ ++ L      AG  ++A  I   +++ G+ PNV 
Sbjct: 1009 SHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVF 1068

Query: 347  MFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
             F  +I G+  + K + A ++Y+ M   G +PN  TYE L
Sbjct: 1069 TFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 116/453 (25%), Positives = 207/453 (45%), Gaps = 18/453 (3%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L    +  EA  +F  + E   +PT++TY TL+A L +  + +  + L   + + G 
Sbjct: 545 INTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC 604

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P++I FN + +   ++  V  A+K+  KM D GC P   TYNT+I G    G+ +E++ 
Sbjct: 605 PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMC 664

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS-GIQP-----DAVTYN 174
               M   K V P+  T   L+      + IE+A+ ++   + +   QP     + +  +
Sbjct: 665 FFHQMK--KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGS 722

Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM-KE 233
            LA A      ++ +E+++    N   R  +     I+   CK  N+  A     +  K+
Sbjct: 723 ILAEAGIDNAVSF-SERLV---ANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKD 778

Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
           L V P L  +N LI G L+    +        ++  G  PDV T++ ++DA+  +G + +
Sbjct: 779 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838

Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI---LTSMRKYGVHPNVVMFTT 350
             E++ +M     E +    +I+  G V+AG    A  +   L S R +   P    +  
Sbjct: 839 LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFS--PTACTYGP 896

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I G   + ++  A  ++E M + G  PN   Y  L+ G+G+A +   A  L + M ++G
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
           VRP   T  ++ D    +G   E     K  +E
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE 989



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/444 (22%), Positives = 204/444 (45%), Gaps = 11/444 (2%)

Query: 4    LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD-GMKP 62
            LV  G+  EA   F+ + +  + P  +T  TL+  + +    +    +I+    +   +P
Sbjct: 653  LVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQP 711

Query: 63   DSILFNAMINACSESGNVDEAMKIFQKMKDSG-CKPTTSTYNTLIKGYGNVGKPEESLKL 121
             ++ +  +I +      +D A+   +++  +G C+   S    +I+          +  L
Sbjct: 712  ANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTL 771

Query: 122  LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
             +  ++D  V+P   TYN+L+      + IE A +V  ++ ++G  PD  TYN L  AY 
Sbjct: 772  FEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYG 831

Query: 182  QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR-MKELEVHPNL 240
            + G+     ++  EM  ++   N  T  I++SG  K GN++DA+   Y  M + +  P  
Sbjct: 832  KSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 891

Query: 241  VVFNSLIKGFLDIKDSDGVDKALTLME---EFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
              +  LI G   +  S  + +A  L E   ++G +P+   ++ +++ +  AG       +
Sbjct: 892  CTYGPLIDG---LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACAL 948

Query: 298  FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
            F  MVK G+ PD+  +S+L       G   +       +++ G++P+VV +  +I+G   
Sbjct: 949  FKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGK 1008

Query: 358  AVKMQRAMSIYEKM-CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
            + +++ A+ ++ +M    GI P+L TY +L+   G A     A ++   ++  G+ P   
Sbjct: 1009 SHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVF 1068

Query: 417  TIQLVADSWRAIGLAREAKRVLKS 440
            T   +   +   G    A  V ++
Sbjct: 1069 TFNALIRGYSLSGKPEHAYAVYQT 1092



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/437 (22%), Positives = 190/437 (43%), Gaps = 36/437 (8%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           GK  E  Y+F+ + +   +    TY T+  +L+ +   K     + K+ + G   ++  +
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSY 191

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +I+   +S    EAM+++++M   G +P+  TY++L+ G G                 
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLG----------------- 234

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
                               +  I+    ++ +M   G++P+  T+    R   + G+  
Sbjct: 235 -------------------KRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKIN 275

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++L  M +    P+  T  +++   C    ++ A     +MK     P+ V + +L+
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
             F D +D D V +  + ME+ G  PDVVTF+ ++DA   AG  G+  +  D M   GI 
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P++H ++ L  G +R      A  +  +M   GV P    +   I  +  +     A+  
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
           +EKM   GI PN+      L+   +A +   A+++   +++ G+ P   T  ++   +  
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515

Query: 428 IGLAREAKRVLKSAEED 444
           +G   EA ++L    E+
Sbjct: 516 VGEIDEAIKLLSEMMEN 532



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 95/411 (23%), Positives = 190/411 (46%), Gaps = 11/411 (2%)

Query: 14   HYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM--KPDSILFNAMI 71
            ++++NC      +P  + +  L+ ++  +    + +S   ++  +G+    DSIL   + 
Sbjct: 702  NFLYNC----ADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIR 757

Query: 72   NACSESGNVDEAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
             +C  + NV  A  +F+K  KD G +P   TYN LI G       E +  +  L  +   
Sbjct: 758  YSCKHN-NVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF-LQVKSTG 815

Query: 131  VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
              P+  TYN L+ A+     I+E + +  +M     + + +T+N +     + G    A 
Sbjct: 816  CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDAL 875

Query: 191  QMLFE-MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
             + ++ M +    P   T G ++ G  K G + +A +    M +    PN  ++N LI G
Sbjct: 876  DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935

Query: 250  FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
            F    ++D        M + GV+PD+ T+S ++D     G + +    F ++ ++G+ PD
Sbjct: 936  FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995

Query: 310  IHVFSILAKGYVRAGEPQKAESILTSMR-KYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
            +  ++++  G  ++   ++A  +   M+   G+ P++  + ++I     A  ++ A  IY
Sbjct: 996  VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIY 1055

Query: 369  EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
             ++   G+ PN+ T+  L+ GY  + +P  A  + Q M   G  P   T +
Sbjct: 1056 NEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYE 1106



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 122/524 (23%), Positives = 213/524 (40%), Gaps = 79/524 (15%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           ++ L   G   EA    + + ++G  P L TY TL+  L R  R    L L   +E  G+
Sbjct: 370 VDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGV 429

Query: 61  KPDS---ILF--------------------------------NAMINACSESGNVDEAMK 85
           KP +   I+F                                NA + + +++G   EA +
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 489

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           IF  +KD G  P + TYN ++K Y  VG+ +E++KLL  M ++   +P+    N L+   
Sbjct: 490 IFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN-GCEPDVIVVNSLINTL 548

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
              + ++EAW +  +M    ++P  VTYNTL     + G+   A ++   M      PN 
Sbjct: 549 YKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNT 608

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
            T   +    CK   +  A++ L++M ++   P++  +N++I G   +K+   V +A+  
Sbjct: 609 ITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL--VKNGQ-VKEAMCF 665

Query: 266 MEEFG--VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF------SILA 317
             +    V PD VT  T++     A L+    +I  + +    +   ++F      SILA
Sbjct: 666 FHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILA 725

Query: 318 KG-----------YVRAGEPQKAESILTSMRKY---------------------GVHPNV 345
           +             V  G  +  +SIL  + +Y                     GV P +
Sbjct: 726 EAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKL 785

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQV 405
             +  +I G   A  ++ A  ++ ++   G  P++ TY  LL  YG++ +     EL + 
Sbjct: 786 PTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKE 845

Query: 406 MEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMP 449
           M          T  +V       G   +A  +      DR   P
Sbjct: 846 MSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSP 889



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 98/200 (49%)

Query: 8    GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
            G+ +EA  +F  +++ G RP    Y  L+    +     +  +L  ++ K+G++PD   +
Sbjct: 905  GRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTY 964

Query: 68   NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
            + +++     G VDE +  F+++K+SG  P    YN +I G G   + EE+L L   M  
Sbjct: 965  SVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKT 1024

Query: 128  DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
             + + P+  TYN L+        +EEA  +  ++  +G++P+  T+N L R Y+  G+  
Sbjct: 1025 SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPE 1084

Query: 188  RAEQMLFEMQNNQVRPNERT 207
             A  +   M      PN  T
Sbjct: 1085 HAYAVYQTMVTGGFSPNTGT 1104



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 4/107 (3%)

Query: 3    ILVGKGKPH---EAHYIFNCL-IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
            I+ G GK H   EA  +FN +    G  P L TY +L+  L      +    + +++++ 
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061

Query: 59   GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTL 105
            G++P+   FNA+I   S SG  + A  ++Q M   G  P T TY  L
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/471 (23%), Positives = 217/471 (46%), Gaps = 39/471 (8%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG  +EA  +   +++    P +  Y TL+    +  +    L L  +++  G++ ++ +
Sbjct: 275 KGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFV 334

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            ++ +N    SG ++EA ++F+ M   G  P    Y +++ G+   GK  ++  + Q M+
Sbjct: 335 IDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMT 394

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIE-EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           + K+   +   YN+L+         E E+++    M   G+ PD+ T+NT+  AY + G 
Sbjct: 395 E-KSSGFDVVAYNVLINGLFKLGKYESESFHT--GMRQLGLAPDSATFNTMINAYCKEGN 451

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A ++L EM++  ++PN  TC I+V   C  G +E  M  L  M  +  HP      +
Sbjct: 452 LGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKA 511

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           ++      + +D +      +   GVK D+ T++T++  +   G++ +   +F DM+  G
Sbjct: 512 VLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKG 571

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           I  DI  ++ L  GY  +   +KA ++ + M   GV PNV  +  ++ G   A  ++ A 
Sbjct: 572 ILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAA 631

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYG---------------------------------- 391
            +  +M E G+ PN  TY+ L+ G+G                                  
Sbjct: 632 GLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCF 691

Query: 392 -EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
            + K+  +A+EL+Q M+ +G+ P  ST  ++   W  +    E  + LK +
Sbjct: 692 AKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRS 742



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/444 (23%), Positives = 206/444 (46%), Gaps = 15/444 (3%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           FN +I+    +G +  A+++ + MK  G  P   TYNTL+ G+  +G    + KL+  +S
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
              N++PN  TY  L+ A+C    +E+A  +  +M    + PD VTY  +     + G+ 
Sbjct: 80  L-VNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKV 138

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+ +  EM+   V PN  +   ++    KEGN+ +A     RM    +  ++VV+ +L
Sbjct: 139 EEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTAL 198

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + G      ++  +    ++ E  + P+ VT+S ++D     G + K + +  +M +  I
Sbjct: 199 MDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHI 258

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P++ V+S +  GY + G   +A  ++  M +  + PNV ++ T+I G+  A +   A+ 
Sbjct: 259 FPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALD 318

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           ++++M   G+  N    ++ +     + +   A+EL + M  +G+ P +     + D + 
Sbjct: 319 LFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFF 378

Query: 427 AIGLAREAKRVLKSAEEDRQSMPNKKDEIAV-----------ESIH---RKQNLSASNST 472
             G   +A  + +   E           + +           ES H   R+  L+  ++T
Sbjct: 379 KAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSAT 438

Query: 473 FLQIPGVVSSEHNGSSAAKIRSQI 496
           F  +      E N  +A K+ +++
Sbjct: 439 FNTMINAYCKEGNLGNALKLLNEM 462



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 196/406 (48%), Gaps = 8/406 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P +ITYTTL+ A  + +  +  L +  ++    + PD + +  ++N   +SG V+EA  +
Sbjct: 85  PNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSV 144

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F++M++ G  P   +Y TLI      G   E+  +LQ     + +  +   Y  L+    
Sbjct: 145 FREMEEVGVVPNRFSYATLIDSLFKEGNVAEAF-VLQGRMVVRGIGFDVVVYTALMDGLF 203

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                  A ++   ++   + P+ VTY+ L   + + G+  + E +L EM+   + PN  
Sbjct: 204 KAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVI 263

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               IV GY K+G + +AM  + +M +  + PN+ V+ +LI G+    D  G+  AL L 
Sbjct: 264 VYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFK-ADQRGI--ALDLF 320

Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           +E    G++ +     + ++    +G M +  E+F DM+  G+ PD   ++ +  G+ +A
Sbjct: 321 KEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKA 380

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+   A +I   M +     +VV +  +I+G     K + + S +  M ++G+ P+  T+
Sbjct: 381 GKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATF 439

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
            T++  Y +      A +LL  M+  G++P   T  ++     A G
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAG 485



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/519 (24%), Positives = 222/519 (42%), Gaps = 71/519 (13%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L   GK  EA  +F  + E G  P   +Y TL+ +L ++        L  ++   G+
Sbjct: 129 MNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI 188

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D +++ A+++   ++G  + A  +FQ + +    P   TY+ LI G+  +G   +   
Sbjct: 189 GFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGEL 248

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LLQ M ++K++ PN   Y+ +V  +  K  + EA +V+ KMV   I P+   Y TL   Y
Sbjct: 249 LLQEM-EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGY 307

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +   A  +  EM++  +  N       V+   + G ME+A      M    + P+ 
Sbjct: 308 FKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDR 367

Query: 241 VVFNSLIKGFLDI-KDSDGVDKAL---------------------------------TLM 266
           V + S++ GF    K+SD  + A                                  T M
Sbjct: 368 VNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGM 427

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            + G+ PD  TF+T+++A+   G +G   ++ ++M   G++P+    +IL +    AGE 
Sbjct: 428 RQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEI 487

Query: 327 QKAESILTSMRKYGVHP------------------NVVM-----------------FTTV 351
           +K   +L  M   G HP                  +V++                 + T+
Sbjct: 488 EKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTL 547

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           IS +C    ++RA  +++ M   GI  ++ TY  L+ GY  +    +A  +   M  +GV
Sbjct: 548 ISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGV 607

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            P   T  ++     A  L +EA  ++   +E R  +PN
Sbjct: 608 SPNVETYNILLGGLSAARLIKEAAGLVNQMKE-RGLVPN 645



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/456 (24%), Positives = 213/456 (46%), Gaps = 26/456 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EA  +F  ++  G  P  + YT+++    +  +     ++  ++ +   
Sbjct: 339 VNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSS 398

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D + +N +IN   + G   E+      M+  G  P ++T+NT+I  Y   G    +LK
Sbjct: 399 GFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALK 457

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M +   +KPN  T NILV+  C+   IE+  +++  M+  G  P   T+  +  A 
Sbjct: 458 LLNEM-KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDAS 516

Query: 181 AQYGETYRAEQMLF---EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
           ++   + RA+ +L    ++    V+ +  T   ++S +C+ G +  A      M    + 
Sbjct: 517 SK---SRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGIL 573

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKC 294
            +++ +N+LI G+     S  + KA  +  +    GV P+V T++ ++   S+A L+ + 
Sbjct: 574 ADIITYNALIHGYCI---SSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEA 630

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
             + + M + G+ P+   + IL  G+ + G  ++   +   M   G  P    +  +IS 
Sbjct: 631 AGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISC 690

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG-YGEAKQP-----------WRAEEL 402
           +    KM +A  + ++M   GI PN  TY+ L+ G Y  +KQP             A+ L
Sbjct: 691 FAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRL 750

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            + M EKG  P ++T+  ++ +    G   +A+R+L
Sbjct: 751 FEEMNEKGFIPCENTLACISFTLAKPGKKADAQRIL 786



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/403 (23%), Positives = 191/403 (47%), Gaps = 2/403 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           EG  P ++TY TL+    +     +   L+ ++    ++P+ I +  +I+A  +S  +++
Sbjct: 46  EGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLED 105

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+ ++ +M      P   TY  ++ G    GK EE+  + + M ++  V PN  +Y  L+
Sbjct: 106 ALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREM-EEVGVVPNRFSYATLI 164

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
            +   + ++ EA+ +  +MV  GI  D V Y  L     + G    AE M   +    + 
Sbjct: 165 DSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLV 224

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           PN  T   ++ G+CK G++      L  M+E  + PN++V++S++ G+      +     
Sbjct: 225 PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDV 284

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           +  M +  + P+V  + T++D +  A   G   ++F +M   G+E +  V         R
Sbjct: 285 MRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKR 344

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           +G  ++A+ +   M   G+ P+ V +T+++ G+  A K   A +I ++M E     ++  
Sbjct: 345 SGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVA 404

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           Y  L+ G  +  + + +E     M + G+ P  +T   + +++
Sbjct: 405 YNVLINGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINAY 446



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/360 (23%), Positives = 159/360 (44%), Gaps = 36/360 (10%)

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           Q   ++ +   +N+L+  +C    I  A  ++  M   G  PD VTYNTL   + + G+ 
Sbjct: 9   QHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDL 68

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
           + A++++ E+    + PN  T   ++  YCK   +EDA+     M    + P++V +  +
Sbjct: 69  FTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCI 128

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKP--------------------------------- 273
           + G       +        MEE GV P                                 
Sbjct: 129 MNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI 188

Query: 274 --DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
             DVV ++ +MD    AG+    +++F  +++  + P+   +S L  G+ + G+  K E 
Sbjct: 189 GFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGEL 248

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +L  M +  + PNV+++++++ G+     +  AM +  KM +  I PN+  Y TL+ GY 
Sbjct: 249 LLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYF 308

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
           +A Q   A +L + M+ +G+      I    ++ +  G   EA  + K     R  +P++
Sbjct: 309 KADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMS-RGLLPDR 367



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 180/384 (46%), Gaps = 1/384 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           R ++  +  L+    R       + L+  ++ +G  PD + +N ++N   + G++  A K
Sbjct: 14  RRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKK 73

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +  ++     +P   TY TLI  Y      E++L +   M+  K++ P+  TY  ++   
Sbjct: 74  LMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTV-KSLVPDVVTYTCIMNGL 132

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C    +EEA +V  +M   G+ P+  +Y TL  +  + G    A  +   M    +  + 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
                ++ G  K G   +A      + E  + PN V +++LI G   + D +  +  L  
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           MEE  + P+V+ +S+I+D ++  GL+ +  ++   MV+  I P++ V+  L  GY +A +
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
              A  +   M+  G+  N  +  + ++    + +M+ A  +++ M   G+ P+   Y +
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 386 LLWGYGEAKQPWRAEELLQVMEEK 409
           ++ G+ +A +   A  + Q M EK
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEK 396



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 18/341 (5%)

Query: 2   NILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NILV +    G+  +   + N ++  G  PT  T+  ++ A ++ +R   IL    ++  
Sbjct: 475 NILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVG 534

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+K D   +N +I+     G +  A  +F+ M   G      TYN LI GY      ++
Sbjct: 535 MGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKK 594

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +  +   M  +  V PN  TYNIL+    +   I+EA  +V +M   G+ P+A TY+ L 
Sbjct: 595 AFAVHSQMLTE-GVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILV 653

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
             + + G      ++  EM      P  RT  +++S + K   M  A   +  M+   + 
Sbjct: 654 SGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIP 713

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTL------------MEEFGVKPDVVTFSTIMDAW 285
           PN   ++ LI G+  +     ++K+L              M E G  P   T + I    
Sbjct: 714 PNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTL 773

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           +  G     Q I + + K     ++ +  +L +   R G+P
Sbjct: 774 AKPGKKADAQRILNKLYKKKTVQEL-LAGVLWESRERKGKP 813



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 115/260 (44%), Gaps = 36/260 (13%)

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           R L   +  E+  ++  FN LI G+    +     + L  M+  G  PD+VT++T+M+ +
Sbjct: 3   RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
              G +   +++  ++    +EP++  ++ L   Y ++   + A  +   M    + P+V
Sbjct: 63  CKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDV 122

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET-------------------- 385
           V +T +++G C + K++ A S++ +M E+G+ PN  +Y T                    
Sbjct: 123 VTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGR 182

Query: 386 ---------------LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
                          L+ G  +A     AE++ QV+ E+ + P   T   + D    +G 
Sbjct: 183 MVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGD 242

Query: 431 AREAKRVLKSAEEDRQSMPN 450
             + + +L+  EE +   PN
Sbjct: 243 VNKGELLLQEMEE-KHIFPN 261


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/445 (24%), Positives = 207/445 (46%), Gaps = 4/445 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +  L   G+  +AH +F+   E    P ++TY  +V         ++ + L+S++   G+
Sbjct: 260 LKALCTAGRIKDAHQLFD---EMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGL 316

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + + + + ++I    + G V +A+++ + M   G     + + T++ G+   G    +  
Sbjct: 317 ELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARN 376

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M Q + +  +  TY  L+   C    ++EA  V+ +M   G+  DAVTY  L   Y
Sbjct: 377 WFDEM-QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY 435

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A  +  +M   +V PN  T   +  G CK+G++  A   L+ M    +  N+
Sbjct: 436 CKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNI 495

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +NSLI G     + +   + +  M+E G+KPDV T++TI+ A   +  + +   +  +
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQE 555

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  GI+P I  +++L  G+  +G  +  + +L  M +  +HPN   + +++  +C    
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+    IY+ M    + PN  TY  L+ G+ +A+    A      M EKG R   S+   
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNA 675

Query: 421 VADSWRAIGLAREAKRVLKSAEEDR 445
           +           EA+R+ +   ++R
Sbjct: 676 LIRLLNKKKKFTEARRLFEKMRKER 700



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 200/389 (51%), Gaps = 12/389 (3%)

Query: 51  LISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG 110
           L+ ++ + G+ P     NA++        +DEA+++FQ++ +      T +YN L+K   
Sbjct: 213 LLLRLRQYGISPSPESCNAVLCRLP----LDEAVQLFQELPEKN----TCSYNILLKALC 264

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
             G+ +++ +L   M+      P+  TY I+V  +C+ + +E A  ++ +M A G++ + 
Sbjct: 265 TAGRIKDAHQLFDEMAS----PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNP 320

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           V Y ++       G+   A +++ +M  + V  +      ++SG+C++G++  A  +   
Sbjct: 321 VAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDE 380

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
           M++  +  + V + +LI G     +    ++ L  ME+ G+  D VT++ ++D +   G 
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           M +   + + MV+  + P++  ++ L+ G  + G+   A  +L  M   G+  N+  + +
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I+G C A  +++AM     M E G+ P++ TY T++    ++K+  RA  LLQ M +KG
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           ++P   T  ++ + +   G     KR+L+
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/411 (23%), Positives = 177/411 (43%), Gaps = 40/411 (9%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           +L  +G+  +A  +   ++  G       +TT+++   R+    +  +   +++K G+  
Sbjct: 329 LLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAA 388

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D + + A+IN    +G + EA ++ Q+M+D G      TY  LI GY  VGK  E+  + 
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448

Query: 123 QLMSQDKNVKPN-----------------------------------DRTYNILVRAWCS 147
             M Q K V PN                                     TYN L+   C 
Sbjct: 449 NKMVQ-KRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCK 507

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
             ++E+A   +  M  +G++PD  TY T+  A  Q  E  RA  +L EM +  ++P   T
Sbjct: 508 AGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVT 567

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
             ++++G+C  G +E   R L  M E  +HPN   +NSL+K +   K+     +    M 
Sbjct: 568 YNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGML 627

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
              V P+  T++ ++     A  M +      +M++ G       ++ L +   +  +  
Sbjct: 628 SQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFT 687

Query: 328 KAESILTSMRK--YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
           +A  +   MRK      P+V  F   +S   N   ++  +++ +++ E+ +
Sbjct: 688 EARRLFEKMRKERLTAEPDVYNFYIDLSF--NEDNLESTLALCDELVEVTL 736


>gi|414868428|tpg|DAA46985.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
          Length = 683

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 196/406 (48%), Gaps = 1/406 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G  H AH +F  +   G RP+   Y  ++AA  R     +      ++  DG +PD   +
Sbjct: 159 GLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTY 218

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +++     G VDEA+++ ++M+ +G +P   TY  L+ G+ N  + EE++ +L+ M +
Sbjct: 219 NTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERM-K 277

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +K V   + TY  LV         E A+ ++ + + S     ++ Y+TL    ++     
Sbjct: 278 EKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDK 337

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++  +M          T  I++    K     D    +    +   +    ++  +I
Sbjct: 338 EAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMII 397

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           K FL  KD    +K  + M   G+   V +++ ++D ++ AG + +  E    M ++G  
Sbjct: 398 KSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFS 457

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P++  F+ L  GY++ G    A++ L  + ++G+ P+V+ FT++I G C+  ++  A + 
Sbjct: 458 PNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNC 517

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           + +M E G+ PN++TY  L+ G   A    +A ELL  M+  G+ P
Sbjct: 518 FSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITP 563



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 187/396 (47%), Gaps = 11/396 (2%)

Query: 54  KVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVG 113
           +V + G++P + ++NA+I A   +G VD A   FQ+M   GC+P   TYNTL+ G    G
Sbjct: 170 QVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRG 229

Query: 114 KPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY 173
             +E+L+L++ M +   ++PN  TY +LV  +C+ + +EEA  V+ +M   G+     TY
Sbjct: 230 IVDEALRLVKQMER-AGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATY 288

Query: 174 NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED--AMRFLYRM 231
            +L     +  E  RA +ML E   +   P   +       YC   N  D  A+    +M
Sbjct: 289 RSLVHGAFRCLEKERAYRMLSEWIESD--PTLHSIAYHTLLYCLSKNDMDKEAVELAKKM 346

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST---IMDAWSSA 288
            +         F+ +I   + + +S  +     L+++F  K   + F     I+ ++   
Sbjct: 347 SKRGYLLGSTTFSIVIPCAVKVLESSDL---CELVDDFIKKGGNLGFDMYIMIIKSFLRC 403

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
             + K  + F  MV  G+   +  ++I+   + +AGE ++A   +  M++ G  PN+V F
Sbjct: 404 KDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTF 463

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
            T+I+G+     +  A +  + + E G+ P++ T+ +L+ G     Q   A      M E
Sbjct: 464 NTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSE 523

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
            GVRP   T  ++     + G   +A  +L   + D
Sbjct: 524 WGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMD 559



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/399 (22%), Positives = 175/399 (43%), Gaps = 34/399 (8%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   EA  +   +   G RP ++TYT LV       R +  + ++ ++++ G+      
Sbjct: 228 RGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEAT 287

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           + ++++        + A ++  +  +S     +  Y+TL+         +E+++L + MS
Sbjct: 288 YRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMS 347

Query: 127 Q------------------------------DKNVKPNDR----TYNILVRAWCSKNSIE 152
           +                              D  +K         Y ++++++     I 
Sbjct: 348 KRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDIS 407

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           +A     +MV+ G+     +YN +   +A+ GE  RA + +  MQ +   PN  T   ++
Sbjct: 408 KANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLI 467

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           +GY K GN+ DA  FL  + E  + P+++ F SLI G       D      + M E+GV+
Sbjct: 468 NGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVR 527

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           P+V T++ ++    SAG + K  E+ + M   GI PD + F+     + R  + +KA+ +
Sbjct: 528 PNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKL 587

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
              M +YGV P+   +  +I   C+  ++  A  I   M
Sbjct: 588 FNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAM 626



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 111/223 (49%), Gaps = 1/223 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A+  F+ ++ +G   ++ +Y  ++    +    +  L  I  +++ G  P+ + FN +I
Sbjct: 408 KANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLI 467

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N   + GNV +A    + + + G  P   T+ +LI G  +  + +++      MS+   V
Sbjct: 468 NGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSE-WGV 526

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +PN +TYN+L+   CS   + +A  ++ KM   GI PDA ++N    ++ +  +  +A++
Sbjct: 527 RPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQK 586

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           +  +M    V P+  T   ++   C E  +++A   +  M+ +
Sbjct: 587 LFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESI 629



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/416 (18%), Positives = 161/416 (38%), Gaps = 71/416 (17%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D  +  A+ +A    G V  +  +   ++  GC+ +      L++ +G +G    + ++ 
Sbjct: 109 DRSVRRALGDALLRRGPVVLSAALVADVRSCGCEVSEELLCALVESWGRLGLAHYAHEVF 168

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             + +   ++P+   YN ++ A     +++ A+    +M A G +PD  TYNTL      
Sbjct: 169 VQVPR-LGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTL------ 221

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                                        V G C+ G +++A+R + +M+   + PN+V 
Sbjct: 222 -----------------------------VHGVCRRGIVDEALRLVKQMERAGIRPNVVT 252

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVK------------------------------ 272
           +  L+ GF +    +     L  M+E GV                               
Sbjct: 253 YTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWI 312

Query: 273 ---PDV--VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
              P +  + + T++   S   +  +  E+   M K G       FSI+    V+  E  
Sbjct: 313 ESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESS 372

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
               ++    K G +    M+  +I  +     + +A   + +M   G+  ++++Y  ++
Sbjct: 373 DLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVI 432

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             + +A +  RA E ++VM+E G  P   T   + + +  +G   +AK  LK   E
Sbjct: 433 DCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVME 488



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 3/140 (2%)

Query: 2   NILVGKGKPHEAHYIFNCLIEE---GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           +++ G    H+    FNC  E    G RP + TY  L+  L         + L++K++ D
Sbjct: 500 SLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMD 559

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+ PD+  FNA I +      +++A K+F  M   G  P + TYN LIK   +  + +E+
Sbjct: 560 GITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEA 619

Query: 119 LKLLQLMSQDKNVKPNDRTY 138
            +++  M     +     TY
Sbjct: 620 KEIILAMESISCIGTKQHTY 639


>gi|46518477|gb|AAS99720.1| At2g19280 [Arabidopsis thaliana]
 gi|62319953|dbj|BAD94048.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|110738808|dbj|BAF01327.1| putative salt-inducible protein [Arabidopsis thaliana]
          Length = 693

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 203/411 (49%), Gaps = 15/411 (3%)

Query: 51  LISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG 110
           L+  ++  G++PD + F   I+   ++G + EA  +  K+K  G    + + +++I G+ 
Sbjct: 293 LLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC 352

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
            VGKPEE++KL+        ++PN   Y+  +   CS   +  A  +  ++   G+ PD 
Sbjct: 353 KVGKPEEAIKLIH----SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDC 408

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           V Y T+   Y   G T +A Q    +  +   P+  T  I++    + G++ DA      
Sbjct: 409 VCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRN 468

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
           MK   +  ++V +N+L+ G+      + V + +  M   G+ PDV T++ ++ +    G 
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           + +  EI  ++++ G  P    F+ +  G+ + G+ Q+A  +   M    + P+VV  + 
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           ++ G+C A +M++A+ ++ K+ + G+ P++  Y TL+ GY       +A EL+ +M ++G
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIH 461
           + P +ST         A+ L  E KR + S  E   SM    +EI V   H
Sbjct: 649 MLPNEST-------HHALVLGLEGKRFVNS--ETHASML--LEEIIVAKWH 688



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 138/286 (48%), Gaps = 6/286 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A  IF  + E G  P  + YTT++       R          + K G  P     
Sbjct: 387 GDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTS 446

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I ACS  G++ +A  +F+ MK  G K    TYN L+ GYG   +  +  +L+  M +
Sbjct: 447 TILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEM-R 505

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              + P+  TYNIL+ +   +  I+EA  ++ +++  G  P  + +  +   +++ G+  
Sbjct: 506 SAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQ 565

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  + F M + +++P+  TC  ++ GYCK   ME A+    ++ +  + P++V++N+LI
Sbjct: 566 EAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLI 625

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
            G+  + D +   + + LM + G+ P+  T   ++      GL GK
Sbjct: 626 HGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV-----LGLEGK 666



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 162/353 (45%), Gaps = 33/353 (9%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG------------------------ 59
           G RP ++ +T  +  L +    K   S++ K++  G                        
Sbjct: 301 GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEA 360

Query: 60  --------MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGN 111
                   ++P+  ++++ ++    +G++  A  IFQ++ + G  P    Y T+I GY N
Sbjct: 361 IKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCN 420

Query: 112 VGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAV 171
           +G+ +++ +    + +  N  P+  T  IL+ A     SI +A +V   M   G++ D V
Sbjct: 421 LGRTDKAFQYFGALLKSGN-PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVV 479

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
           TYN L   Y +  +  +  +++ EM++  + P+  T  I++      G +++A   +  +
Sbjct: 480 TYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
                 P+ + F  +I GF    D          M +  +KPDVVT S ++  +  A  M
Sbjct: 540 IRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRM 599

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
            K   +F+ ++ AG++PD+ +++ L  GY   G+ +KA  ++  M + G+ PN
Sbjct: 600 EKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPN 652



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/370 (21%), Positives = 172/370 (46%), Gaps = 6/370 (1%)

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ-L 124
           +F+ +I+ C     V+ A+K+  K+   G  P+     +L+K    V   E + + ++ +
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           +S+ +++  N    ++ +R +CS    ++ W ++  M   GI+PD V +        + G
Sbjct: 263 LSRGRHL--NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAG 320

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
               A  +LF+++   +  +  +   ++ G+CK G  E+A++ ++  +   + PN+ V++
Sbjct: 321 FLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYS 377

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           S +       D          + E G+ PD V ++T++D + + G   K  + F  ++K+
Sbjct: 378 SFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKS 437

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G  P +   +IL     R G    AES+  +M+  G+  +VV +  ++ G+    ++ + 
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             + ++M   GI+P++ TY  L+           A E++  +  +G  P       V   
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557

Query: 425 WRAIGLAREA 434
           +   G  +EA
Sbjct: 558 FSKRGDFQEA 567



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 72/334 (21%), Positives = 132/334 (39%), Gaps = 32/334 (9%)

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
            ++IL+     +  +  A  + YK+   GI P      +L +   +      A + +  M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK-----GFL 251
            +     N     + +  YC +G  +     L  MK   + P++V F   I      GFL
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322

Query: 252 DIKDS---------------------DGV------DKALTLMEEFGVKPDVVTFSTIMDA 284
               S                     DG       ++A+ L+  F ++P++  +S+ +  
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSN 382

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
             S G M +   IF ++ + G+ PD   ++ +  GY   G   KA     ++ K G  P+
Sbjct: 383 ICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPS 442

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
           +   T +I        +  A S++  M   G+  ++ TY  L+ GYG+  Q  +  EL+ 
Sbjct: 443 LTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELID 502

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            M   G+ P  +T  ++  S    G   EA  ++
Sbjct: 503 EMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 125/260 (48%), Gaps = 11/260 (4%)

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A ++ +++    + P+   C  ++    +   +E A  F+  M     H N  V +  I+
Sbjct: 220 ALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIR 279

Query: 249 GFLDIKDSDG-VDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            +     SDG  DK   L   M+ +G++PD+V F+  +D    AG + +   +   +   
Sbjct: 280 KYC----SDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLF 335

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           GI  D    S +  G+ + G+P++A  ++ S R   + PN+ ++++ +S  C+   M RA
Sbjct: 336 GISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRA 392

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
            +I++++ E+G+ P+   Y T++ GY    +  +A +    + + G  P  +T  ++  +
Sbjct: 393 STIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGA 452

Query: 425 WRAIGLAREAKRVLKSAEED 444
               G   +A+ V ++ + +
Sbjct: 453 CSRFGSISDAESVFRNMKTE 472



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 81/139 (58%), Gaps = 1/139 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           +V +G   EA+ I + LI  G  P+ + +T ++   +++  F+    L   +    MKPD
Sbjct: 523 MVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPD 582

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +  +A+++   ++  +++A+ +F K+ D+G KP    YNTLI GY +VG  E++ +L+ 
Sbjct: 583 VVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIG 642

Query: 124 LMSQDKNVKPNDRTYNILV 142
           LM Q + + PN+ T++ LV
Sbjct: 643 LMVQ-RGMLPNESTHHALV 660



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 55/102 (53%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   EA  ++  + +   +P ++T + L+    + +R +  + L +K+   G+KPD +L
Sbjct: 561 RGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVL 620

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
           +N +I+     G++++A ++   M   G  P  ST++ L+ G
Sbjct: 621 YNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG 662


>gi|414868427|tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
          Length = 674

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 196/406 (48%), Gaps = 1/406 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G  H AH +F  +   G RP+   Y  ++AA  R     +      ++  DG +PD   +
Sbjct: 159 GLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTY 218

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           N +++     G VDEA+++ ++M+ +G +P   TY  L+ G+ N  + EE++ +L+ M +
Sbjct: 219 NTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERM-K 277

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
           +K V   + TY  LV         E A+ ++ + + S     ++ Y+TL    ++     
Sbjct: 278 EKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDK 337

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++  +M          T  I++    K     D    +    +   +    ++  +I
Sbjct: 338 EAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMII 397

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
           K FL  KD    +K  + M   G+   V +++ ++D ++ AG + +  E    M ++G  
Sbjct: 398 KSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFS 457

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P++  F+ L  GY++ G    A++ L  + ++G+ P+V+ FT++I G C+  ++  A + 
Sbjct: 458 PNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNC 517

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           + +M E G+ PN++TY  L+ G   A    +A ELL  M+  G+ P
Sbjct: 518 FSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITP 563



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 187/396 (47%), Gaps = 11/396 (2%)

Query: 54  KVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVG 113
           +V + G++P + ++NA+I A   +G VD A   FQ+M   GC+P   TYNTL+ G    G
Sbjct: 170 QVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRG 229

Query: 114 KPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY 173
             +E+L+L++ M +   ++PN  TY +LV  +C+ + +EEA  V+ +M   G+     TY
Sbjct: 230 IVDEALRLVKQMER-AGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATY 288

Query: 174 NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMED--AMRFLYRM 231
            +L     +  E  RA +ML E   +   P   +       YC   N  D  A+    +M
Sbjct: 289 RSLVHGAFRCLEKERAYRMLSEWIESD--PTLHSIAYHTLLYCLSKNDMDKEAVELAKKM 346

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST---IMDAWSSA 288
            +         F+ +I   + + +S  +     L+++F  K   + F     I+ ++   
Sbjct: 347 SKRGYLLGSTTFSIVIPCAVKVLESSDL---CELVDDFIKKGGNLGFDMYIMIIKSFLRC 403

Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
             + K  + F  MV  G+   +  ++I+   + +AGE ++A   +  M++ G  PN+V F
Sbjct: 404 KDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTF 463

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
            T+I+G+     +  A +  + + E G+ P++ T+ +L+ G     Q   A      M E
Sbjct: 464 NTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSE 523

Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
            GVRP   T  ++     + G   +A  +L   + D
Sbjct: 524 WGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMD 559



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/399 (22%), Positives = 175/399 (43%), Gaps = 34/399 (8%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   EA  +   +   G RP ++TYT LV       R +  + ++ ++++ G+      
Sbjct: 228 RGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEAT 287

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           + ++++        + A ++  +  +S     +  Y+TL+         +E+++L + MS
Sbjct: 288 YRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMS 347

Query: 127 Q------------------------------DKNVKPNDR----TYNILVRAWCSKNSIE 152
           +                              D  +K         Y ++++++     I 
Sbjct: 348 KRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDIS 407

Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
           +A     +MV+ G+     +YN +   +A+ GE  RA + +  MQ +   PN  T   ++
Sbjct: 408 KANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLI 467

Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
           +GY K GN+ DA  FL  + E  + P+++ F SLI G       D      + M E+GV+
Sbjct: 468 NGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVR 527

Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
           P+V T++ ++    SAG + K  E+ + M   GI PD + F+     + R  + +KA+ +
Sbjct: 528 PNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKL 587

Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
              M +YGV P+   +  +I   C+  ++  A  I   M
Sbjct: 588 FNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAM 626



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 111/223 (49%), Gaps = 1/223 (0%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
           +A+  F+ ++ +G   ++ +Y  ++    +    +  L  I  +++ G  P+ + FN +I
Sbjct: 408 KANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLI 467

Query: 72  NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
           N   + GNV +A    + + + G  P   T+ +LI G  +  + +++      MS+   V
Sbjct: 468 NGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSE-WGV 526

Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
           +PN +TYN+L+   CS   + +A  ++ KM   GI PDA ++N    ++ +  +  +A++
Sbjct: 527 RPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQK 586

Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
           +  +M    V P+  T   ++   C E  +++A   +  M+ +
Sbjct: 587 LFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESI 629



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/416 (18%), Positives = 161/416 (38%), Gaps = 71/416 (17%)

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D  +  A+ +A    G V  +  +   ++  GC+ +      L++ +G +G    + ++ 
Sbjct: 109 DRSVRRALGDALLRRGPVVLSAALVADVRSCGCEVSEELLCALVESWGRLGLAHYAHEVF 168

Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
             + +   ++P+   YN ++ A     +++ A+    +M A G +PD  TYNTL      
Sbjct: 169 VQVPR-LGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTL------ 221

Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
                                        V G C+ G +++A+R + +M+   + PN+V 
Sbjct: 222 -----------------------------VHGVCRRGIVDEALRLVKQMERAGIRPNVVT 252

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVK------------------------------ 272
           +  L+ GF +    +     L  M+E GV                               
Sbjct: 253 YTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWI 312

Query: 273 ---PDV--VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
              P +  + + T++   S   +  +  E+   M K G       FSI+    V+  E  
Sbjct: 313 ESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESS 372

Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLL 387
               ++    K G +    M+  +I  +     + +A   + +M   G+  ++++Y  ++
Sbjct: 373 DLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVI 432

Query: 388 WGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
             + +A +  RA E ++VM+E G  P   T   + + +  +G   +AK  LK   E
Sbjct: 433 DCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVME 488



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 3/156 (1%)

Query: 2   NILVGKGKPHEAHYIFNC---LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
           +++ G    H+    FNC   + E G RP + TY  L+  L         + L++K++ D
Sbjct: 500 SLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMD 559

Query: 59  GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
           G+ PD+  FNA I +      +++A K+F  M   G  P + TYN LIK   +  + +E+
Sbjct: 560 GITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEA 619

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEA 154
            +++  M     +     TY  +V A        EA
Sbjct: 620 KEIILAMESISCIGTKQHTYWPVVGALTKMGRFSEA 655


>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 401

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 173/352 (49%), Gaps = 45/352 (12%)

Query: 62  PDSILFNAMINACSESGNVDEAMKIFQKMKDSG--CKPTTSTYNTLIKGYGNVGKPEESL 119
           PD   +N ++N   +     EA+++   M D G  C P   +Y+T+I G+   G  ++ L
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKML 108

Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
                   D+ + PN  TYN ++ A C   ++++A  V+  MV SG+ PD +TYN+    
Sbjct: 109 --------DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNS---- 156

Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
                                          IV G+C  G  ++A+ FL +M+   V P+
Sbjct: 157 -------------------------------IVHGFCSSGQPKEAIVFLKKMRSDGVEPD 185

Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
           +V +NSL+             K    M + G+KPD+ T+ T++  +++ G + +   + D
Sbjct: 186 VVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLD 245

Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
            MV+ GI P+ +VFSIL   Y +  + ++A  + + MR+ G++PN V + TVI   C + 
Sbjct: 246 LMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSG 305

Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           +++ AM  +E+M + G+ P+   Y +L+       +  +AEEL   M ++G+
Sbjct: 306 RVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGI 357



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 179/373 (47%), Gaps = 11/373 (2%)

Query: 12  EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG--MKPDSILFNA 69
           +A ++F+ L+  G  P + +Y  L+  L  + R +  L L+  +  DG    PD + ++ 
Sbjct: 35  DARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93

Query: 70  MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK 129
           +IN   + G++D       KM D    P   TYN++I         ++++++L  M +  
Sbjct: 94  VINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK-S 145

Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
            V P+  TYN +V  +CS    +EA   + KM + G++PD VTYN+L     + G    A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
            ++   M    ++P+  T G ++ GY  +G + +    L  M    +HPN  VF+ L+  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 250 FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
           +   +  +      + M + G+ P+ VT+ T++D    +G +      F+ M+  G+ PD
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPD 325

Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
             V++ L        + +KAE +   M   G+  + + F ++I   C   ++  +  +++
Sbjct: 326 SIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFD 385

Query: 370 KMCEIGINPNLKT 382
            M  IG+ P++ T
Sbjct: 386 LMVRIGVKPDIIT 398



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 148/283 (52%), Gaps = 9/283 (3%)

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG--IQPDAVTYNTLARAYAQYGETYRAE 190
           P+  +YNIL+   C +N  +EA  +++ M   G    PD V+Y+T+   + + G+     
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGD----- 103

Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
             L +M + ++ PN  T   I++  CK   ++ AM  L  M +  V P+ + +NS++ GF
Sbjct: 104 --LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 161

Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
                       L  M   GV+PDVVT++++MD     G   + ++IFD M K G++PDI
Sbjct: 162 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDI 221

Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
             +  L +GY   G   +   +L  M + G+HPN  +F+ ++  +    K++ AM ++ K
Sbjct: 222 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK 281

Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
           M + G+NPN  TY T++    ++ +   A    + M ++G+RP
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRP 324



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 119/225 (52%), Gaps = 9/225 (4%)

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL--EVHPNLVVFNSLIKGFLDIKDSDGVD 260
           P+  +  I+++G C E   ++A+  L+ M +   +  P++V ++++I GF   K+ D +D
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFF--KEGD-LD 105

Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
           K L    +  + P+VVT+++I+ A   A  + K  E+   MVK+G+ PD   ++ +  G+
Sbjct: 106 KML----DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 161

Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
             +G+P++A   L  MR  GV P+VV + +++   C   +   A  I++ M + G+ P++
Sbjct: 162 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDI 221

Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            TY TLL GY           LL +M   G+ P      ++  ++
Sbjct: 222 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 266



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 106/209 (50%), Gaps = 1/209 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           M+ L   G+  EA  IF+ + + G +P + TY TL+     +     +  L+  + ++G+
Sbjct: 193 MDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 252

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
            P+  +F+ ++ A ++   V+EAM +F KM+  G  P   TY T+I      G+ E+++ 
Sbjct: 253 HPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAML 312

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
             + M  D+ ++P+   YN L+ + C  +  E+A  +  +M+  GI    + +N++  ++
Sbjct: 313 YFEQMI-DEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSH 371

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCG 209
            + G    + ++   M    V+P+  T G
Sbjct: 372 CKEGRVIESGKLFDLMVRIGVKPDIITLG 400



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 10/152 (6%)

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG--VHPNVVMFTTVI 352
           + +FD++++ GI PD+  ++IL  G       Q+A  +L  M   G    P+VV ++TVI
Sbjct: 37  RHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVI 95

Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
           +G+     +       +KM +  I+PN+ TY +++    +A+   +A E+L  M + GV 
Sbjct: 96  NGFFKEGDL-------DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVM 148

Query: 413 PKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
           P   T   +   + + G  +EA   LK    D
Sbjct: 149 PDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSD 180


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 184/413 (44%), Gaps = 2/413 (0%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P   T+ T+     +  R + +  +   + + G    +  +  +I+   + GN DEA K+
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
              M+    K     Y+T+I     + + EE+ +L++ M+  +   P+  TY  +V   C
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA--RYAPPDALTYGPIVERLC 125

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
               I++A   V +M   GI+PDA  YN +     Q  +   A  +  +M   ++ PN  
Sbjct: 126 KTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVV 185

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
           T   +++G CK   +E A      M      P  V +N+LI GF   KD          M
Sbjct: 186 TYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM 245

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
                 P+VVT++T++D  S +G +    E+ D MVK G+ P++  +S L  G+ +    
Sbjct: 246 VRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRV 305

Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
            +A  +L  M   G+ P VV +  +++  C A K++ A  ++  M +   +P + TY TL
Sbjct: 306 DEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTL 365

Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           L      KQ   A  L   M  KG  P   T   +A      G   EA+ +++
Sbjct: 366 LRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELME 418



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 187/400 (46%), Gaps = 2/400 (0%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G+  +   ++  ++E G+      Y  L++ L +   F     L+  +     K  +I +
Sbjct: 24  GRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAY 83

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
           + +IN   +   V+EA ++ +KM      P   TY  +++      + +++L  ++ M+ 
Sbjct: 84  STIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKRIDDALATVEEMAT 142

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
            + +KP+   YN ++   C +  +EEA  +  KMV   I P+ VTYNTL     +     
Sbjct: 143 -RGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIE 201

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A ++  EM      P E +   ++ G+CK+ ++  A     +M      PN+V + +LI
Sbjct: 202 TAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLI 261

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
            G           + L  M + GV P+V T+S ++D +     + +  ++ + MV  GI 
Sbjct: 262 DGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIA 321

Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
           P +  ++IL     RA + + A  +   M +   HP VV + T++   C+  ++  A  +
Sbjct: 322 PTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRL 381

Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
           Y +M   G  P+  TY+TL WG   A +   A+EL++ M+
Sbjct: 382 YAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 107/195 (54%), Gaps = 1/195 (0%)

Query: 13  AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
           A  +F+ ++     P ++TYTTL+  L++  + ++   ++  + K G+ P+   ++ +I+
Sbjct: 238 AKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLID 297

Query: 73  ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
              +   VDEA K+ ++M   G  PT  TYN L+       K E++ KL + M+Q +   
Sbjct: 298 GFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQ-RRCH 356

Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
           P   TYN L+RA C    ++ A  +  +M+A G  PDA+TY+TLA    + G+ + A+++
Sbjct: 357 PTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQEL 416

Query: 193 LFEMQNNQVRPNERT 207
           + +M+  +  P  R+
Sbjct: 417 MEKMKLTKRNPFGRS 431



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 139/314 (44%), Gaps = 7/314 (2%)

Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
           + V P   T+N +   +     +E+   V   MV +G    A  Y  L     + G    
Sbjct: 4   RRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDE 63

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A ++L  M+  + +        I++  CK   +E+A   + +M      P+ + +  +++
Sbjct: 64  AYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARY-APPDALTYGPIVE 122

Query: 249 GFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
                K    +D AL  +EE    G+KPD   ++ ++        + + + +F+ MVK  
Sbjct: 123 RLCKTKR---IDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           I P++  ++ L  G  +A   + A  +   M   G  P  V + T+I G+C    +  A 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
            +++KM      PN+ TY TL+ G  ++ +   A E+L  M +KGV P  +T   + D +
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 426 RAIGLAREAKRVLK 439
             +    EA ++L+
Sbjct: 300 CKVRRVDEAHKLLE 313



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 47/91 (51%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L    K  +A  +F  + +    PT++TY TL+ AL   K+      L +++   G 
Sbjct: 331 LNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGC 390

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMK 91
            PD+I ++ +    + +G V EA ++ +KMK
Sbjct: 391 PPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421


>gi|15224753|ref|NP_179518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334184304|ref|NP_001189552.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546774|sp|Q6NKW7.2|PP164_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g19280
 gi|3135258|gb|AAC16458.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251769|gb|AEC06863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|330251770|gb|AEC06864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 693

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 203/411 (49%), Gaps = 15/411 (3%)

Query: 51  LISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG 110
           L+  ++  G++PD + F   I+   ++G + EA  +  K+K  G    + + +++I G+ 
Sbjct: 293 LLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC 352

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
            VGKPEE++KL+        ++PN   Y+  +   CS   +  A  +  ++   G+ PD 
Sbjct: 353 KVGKPEEAIKLIH----SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDC 408

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           V Y T+   Y   G T +A Q    +  +   P+  T  I++    + G++ DA      
Sbjct: 409 VCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRN 468

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
           MK   +  ++V +N+L+ G+      + V + +  M   G+ PDV T++ ++ +    G 
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           + +  EI  ++++ G  P    F+ +  G+ + G+ Q+A  +   M    + P+VV  + 
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           ++ G+C A +M++A+ ++ K+ + G+ P++  Y TL+ GY       +A EL+ +M ++G
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIH 461
           + P +ST         A+ L  E KR + S  E   SM    +EI V   H
Sbjct: 649 MLPNEST-------HHALVLGLEGKRFVNS--ETHASML--LEEIIVAKWH 688



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 138/286 (48%), Gaps = 6/286 (2%)

Query: 8   GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
           G    A  IF  + E G  P  + YTT++       R          + K G  P     
Sbjct: 387 GDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTS 446

Query: 68  NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
             +I ACS  G++ +A  +F+ MK  G K    TYN L+ GYG   +  +  +L+  M +
Sbjct: 447 TILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEM-R 505

Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
              + P+  TYNIL+ +   +  I+EA  ++ +++  G  P  + +  +   +++ G+  
Sbjct: 506 SAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQ 565

Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
            A  + F M + +++P+  TC  ++ GYCK   ME A+    ++ +  + P++V++N+LI
Sbjct: 566 EAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLI 625

Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
            G+  + D +   + + LM + G+ P+  T   ++      GL GK
Sbjct: 626 HGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV-----LGLEGK 666



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 162/353 (45%), Gaps = 33/353 (9%)

Query: 24  GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG------------------------ 59
           G RP ++ +T  +  L +    K   S++ K++  G                        
Sbjct: 301 GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEA 360

Query: 60  --------MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGN 111
                   ++P+  ++++ ++    +G++  A  IFQ++ + G  P    Y T+I GY N
Sbjct: 361 IKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCN 420

Query: 112 VGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAV 171
           +G+ +++ +    + +  N  P+  T  IL+ A     SI +A +V   M   G++ D V
Sbjct: 421 LGRTDKAFQYFGALLKSGN-PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVV 479

Query: 172 TYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
           TYN L   Y +  +  +  +++ EM++  + P+  T  I++      G +++A   +  +
Sbjct: 480 TYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539

Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
                 P+ + F  +I GF    D          M +  +KPDVVT S ++  +  A  M
Sbjct: 540 IRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRM 599

Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
            K   +F+ ++ AG++PD+ +++ L  GY   G+ +KA  ++  M + G+ PN
Sbjct: 600 EKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPN 652



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/370 (21%), Positives = 172/370 (46%), Gaps = 6/370 (1%)

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ-L 124
           +F+ +I+ C     V+ A+K+  K+   G  P+     +L+K    V   E + + ++ +
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262

Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
           +S+ +++  N    ++ +R +CS    ++ W ++  M   GI+PD V +        + G
Sbjct: 263 LSRGRHL--NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAG 320

Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
               A  +LF+++   +  +  +   ++ G+CK G  E+A++ ++  +   + PN+ V++
Sbjct: 321 FLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYS 377

Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
           S +       D          + E G+ PD V ++T++D + + G   K  + F  ++K+
Sbjct: 378 SFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKS 437

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           G  P +   +IL     R G    AES+  +M+  G+  +VV +  ++ G+    ++ + 
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
             + ++M   GI+P++ TY  L+           A E++  +  +G  P       V   
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557

Query: 425 WRAIGLAREA 434
           +   G  +EA
Sbjct: 558 FSKRGDFQEA 567



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 72/334 (21%), Positives = 132/334 (39%), Gaps = 32/334 (9%)

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
            ++IL+     +  +  A  + YK+   GI P      +L +   +      A + +  M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262

Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK-----GFL 251
            +     N     + +  YC +G  +     L  MK   + P++V F   I      GFL
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322

Query: 252 DIKDS---------------------DGV------DKALTLMEEFGVKPDVVTFSTIMDA 284
               S                     DG       ++A+ L+  F ++P++  +S+ +  
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSN 382

Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
             S G M +   IF ++ + G+ PD   ++ +  GY   G   KA     ++ K G  P+
Sbjct: 383 ICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPS 442

Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
           +   T +I        +  A S++  M   G+  ++ TY  L+ GYG+  Q  +  EL+ 
Sbjct: 443 LTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELID 502

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            M   G+ P  +T  ++  S    G   EA  ++
Sbjct: 503 EMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 125/260 (48%), Gaps = 11/260 (4%)

Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
           A ++ +++    + P+   C  ++    +   +E A  F+  M     H N  V +  I+
Sbjct: 220 ALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIR 279

Query: 249 GFLDIKDSDG-VDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
            +     SDG  DK   L   M+ +G++PD+V F+  +D    AG + +   +   +   
Sbjct: 280 KYC----SDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLF 335

Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
           GI  D    S +  G+ + G+P++A  ++ S R   + PN+ ++++ +S  C+   M RA
Sbjct: 336 GISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRA 392

Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
            +I++++ E+G+ P+   Y T++ GY    +  +A +    + + G  P  +T  ++  +
Sbjct: 393 STIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGA 452

Query: 425 WRAIGLAREAKRVLKSAEED 444
               G   +A+ V ++ + +
Sbjct: 453 CSRFGSISDAESVFRNMKTE 472



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 81/139 (58%), Gaps = 1/139 (0%)

Query: 4   LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
           +V +G   EA+ I + LI  G  P+ + +T ++   +++  F+    L   +    MKPD
Sbjct: 523 MVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPD 582

Query: 64  SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
            +  +A+++   ++  +++A+ +F K+ D+G KP    YNTLI GY +VG  E++ +L+ 
Sbjct: 583 VVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIG 642

Query: 124 LMSQDKNVKPNDRTYNILV 142
           LM Q + + PN+ T++ LV
Sbjct: 643 LMVQ-RGMLPNESTHHALV 660



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 55/102 (53%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           +G   EA  ++  + +   +P ++T + L+    + +R +  + L +K+   G+KPD +L
Sbjct: 561 RGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVL 620

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
           +N +I+     G++++A ++   M   G  P  ST++ L+ G
Sbjct: 621 YNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG 662


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/471 (23%), Positives = 217/471 (46%), Gaps = 39/471 (8%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG  +EA  +   +++    P +  Y TL+    +  +    L L  +++  G++ ++ +
Sbjct: 275 KGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFV 334

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            ++ +N    SG ++EA ++F+ M   G  P    Y +++ G+   GK  ++  + Q M+
Sbjct: 335 IDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMT 394

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIE-EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           + K+   +   YN+L+         E E+++    M   G+ PD+ T+NT+  AY + G 
Sbjct: 395 E-KSSGFDVVAYNVLINGLFKLGKYESESFHT--GMRQLGLAPDSATFNTMINAYCKEGN 451

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A ++L EM++  ++PN  TC I+V   C  G +E  M  L  M  +  HP      +
Sbjct: 452 LGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKA 511

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           ++      + +D +      +   GVK D+ T++T++  +   G++ +   +F DM+  G
Sbjct: 512 VLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKG 571

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           I  DI  ++ L  GY  +   +KA ++ + M   GV PNV  +  ++ G   A  ++ A 
Sbjct: 572 ILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAA 631

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYG---------------------------------- 391
            +  +M E G+ PN  TY+ L+ G+G                                  
Sbjct: 632 GLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCF 691

Query: 392 -EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
            + K+  +A+EL+Q M+ +G+ P  ST  ++   W  +    E  + LK +
Sbjct: 692 AKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRS 742



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/444 (23%), Positives = 206/444 (46%), Gaps = 15/444 (3%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           FN +I+    +G +  A+++ + MK  G  P   TYNTL+ G+  +G    + KL+  +S
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
              N++PN  TY  L+ A+C    +E+A  +  +M    + PD VTY  +     + G+ 
Sbjct: 80  L-VNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKV 138

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+ +  EM+   V PN  +   ++    KEGN+ +A     RM    +  ++VV+ +L
Sbjct: 139 EEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTAL 198

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + G      ++  +    ++ E  + P+ VT+S ++D     G + K + +  +M +  I
Sbjct: 199 MDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHI 258

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P++ V+S +  GY + G   +A  ++  M +  + PNV ++ T+I G+  A +   A+ 
Sbjct: 259 FPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALD 318

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           ++++M   G+  N    ++ +     + +   A+EL + M  +G+ P +     + D + 
Sbjct: 319 LFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFF 378

Query: 427 AIGLAREAKRVLKSAEEDRQSMPNKKDEIAV-----------ESIH---RKQNLSASNST 472
             G   +A  + +   E           + +           ES H   R+  L+  ++T
Sbjct: 379 KAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSAT 438

Query: 473 FLQIPGVVSSEHNGSSAAKIRSQI 496
           F  +      E N  +A K+ +++
Sbjct: 439 FNTMINAYCKEGNLGNALKLLNEM 462



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 196/406 (48%), Gaps = 8/406 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P +ITYTTL+ A  + +  +  L +  ++    + PD + +  ++N   +SG V+EA  +
Sbjct: 85  PNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSV 144

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F++M++ G  P   +Y TLI      G   E+  +LQ     + +  +   Y  L+    
Sbjct: 145 FREMEEVGVVPNRFSYATLIDSLFKEGNVAEAF-VLQGRMVVRGIGFDVVVYTALMDGLF 203

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                  A ++   ++   + P+ VTY+ L   + + G+  + E +L EM+   + PN  
Sbjct: 204 KAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVI 263

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               IV GY K+G + +AM  + +M +  + PN+ V+ +LI G+    D  G+  AL L 
Sbjct: 264 VYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFK-ADQRGI--ALDLF 320

Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           +E    G++ +     + ++    +G M +  E+F DM+  G+ PD   ++ +  G+ +A
Sbjct: 321 KEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKA 380

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+   A +I   M +     +VV +  +I+G     K + + S +  M ++G+ P+  T+
Sbjct: 381 GKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATF 439

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
            T++  Y +      A +LL  M+  G++P   T  ++     A G
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAG 485



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/519 (24%), Positives = 222/519 (42%), Gaps = 71/519 (13%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L   GK  EA  +F  + E G  P   +Y TL+ +L ++        L  ++   G+
Sbjct: 129 MNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI 188

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D +++ A+++   ++G  + A  +FQ + +    P   TY+ LI G+  +G   +   
Sbjct: 189 GFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGEL 248

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LLQ M ++K++ PN   Y+ +V  +  K  + EA +V+ KMV   I P+   Y TL   Y
Sbjct: 249 LLQEM-EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGY 307

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +   A  +  EM++  +  N       V+   + G ME+A      M    + P+ 
Sbjct: 308 FKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDR 367

Query: 241 VVFNSLIKGFLDI-KDSDGVDKAL---------------------------------TLM 266
           V + S++ GF    K+SD  + A                                  T M
Sbjct: 368 VNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGM 427

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            + G+ PD  TF+T+++A+   G +G   ++ ++M   G++P+    +IL +    AGE 
Sbjct: 428 RQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEI 487

Query: 327 QKAESILTSMRKYGVHP------------------NVVM-----------------FTTV 351
           +K   +L  M   G HP                  +V++                 + T+
Sbjct: 488 EKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTL 547

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           IS +C    ++RA  +++ M   GI  ++ TY  L+ GY  +    +A  +   M  +GV
Sbjct: 548 ISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGV 607

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            P   T  ++     A  L +EA  ++   +E R  +PN
Sbjct: 608 SPNVETYNILLGGLSAARLIKEAAGLVNQMKE-RGLVPN 645



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/456 (24%), Positives = 213/456 (46%), Gaps = 26/456 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EA  +F  ++  G  P  + YT+++    +  +     ++  ++ +   
Sbjct: 339 VNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSS 398

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D + +N +IN   + G   E+      M+  G  P ++T+NT+I  Y   G    +LK
Sbjct: 399 GFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALK 457

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M +   +KPN  T NILV+  C+   IE+  +++  M+  G  P   T+  +  A 
Sbjct: 458 LLNEM-KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDAS 516

Query: 181 AQYGETYRAEQMLF---EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
           ++   + RA+ +L    ++    V+ +  T   ++S +C+ G +  A      M    + 
Sbjct: 517 SK---SRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGIL 573

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKC 294
            +++ +N+LI G+     S  + KA  +  +    GV P+V T++ ++   S+A L+ + 
Sbjct: 574 ADIITYNALIHGYCI---SSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEA 630

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
             + + M + G+ P+   + IL  G+ + G  ++   +   M   G  P    +  +IS 
Sbjct: 631 AGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISC 690

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG-YGEAKQP-----------WRAEEL 402
           +    KM +A  + ++M   GI PN  TY+ L+ G Y  +KQP             A+ L
Sbjct: 691 FAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRL 750

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            + M EKG  P ++T+  ++ +    G   +A+R+L
Sbjct: 751 FEEMNEKGFIPCENTLACISFTLAKPGKKADAQRIL 786



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/403 (23%), Positives = 191/403 (47%), Gaps = 2/403 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           EG  P ++TY TL+    +     +   L+ ++    ++P+ I +  +I+A  +S  +++
Sbjct: 46  EGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLED 105

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+ ++ +M      P   TY  ++ G    GK EE+  + + M ++  V PN  +Y  L+
Sbjct: 106 ALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREM-EEVGVVPNRFSYATLI 164

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
            +   + ++ EA+ +  +MV  GI  D V Y  L     + G    AE M   +    + 
Sbjct: 165 DSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLV 224

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           PN  T   ++ G+CK G++      L  M+E  + PN++V++S++ G+      +     
Sbjct: 225 PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDV 284

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           +  M +  + P+V  + T++D +  A   G   ++F +M   G+E +  V         R
Sbjct: 285 MRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKR 344

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           +G  ++A+ +   M   G+ P+ V +T+++ G+  A K   A +I ++M E     ++  
Sbjct: 345 SGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVA 404

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           Y  L+ G  +  + + +E     M + G+ P  +T   + +++
Sbjct: 405 YNVLINGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINAY 446



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/360 (23%), Positives = 159/360 (44%), Gaps = 36/360 (10%)

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           Q   ++ +   +N+L+  +C    I  A  ++  M   G  PD VTYNTL   + + G+ 
Sbjct: 9   QHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDL 68

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
           + A++++ E+    + PN  T   ++  YCK   +EDA+     M    + P++V +  +
Sbjct: 69  FTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCI 128

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKP--------------------------------- 273
           + G       +        MEE GV P                                 
Sbjct: 129 MNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI 188

Query: 274 --DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
             DVV ++ +MD    AG+    +++F  +++  + P+   +S L  G+ + G+  K E 
Sbjct: 189 GFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGEL 248

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +L  M +  + PNV+++++++ G+     +  AM +  KM +  I PN+  Y TL+ GY 
Sbjct: 249 LLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYF 308

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
           +A Q   A +L + M+ +G+      I    ++ +  G   EA  + K     R  +P++
Sbjct: 309 KADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM-MSRGLLPDR 367



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 180/384 (46%), Gaps = 1/384 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           R ++  +  L+    R       + L+  ++ +G  PD + +N ++N   + G++  A K
Sbjct: 14  RRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKK 73

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +  ++     +P   TY TLI  Y      E++L +   M+  K++ P+  TY  ++   
Sbjct: 74  LMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTV-KSLVPDVVTYTCIMNGL 132

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C    +EEA +V  +M   G+ P+  +Y TL  +  + G    A  +   M    +  + 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
                ++ G  K G   +A      + E  + PN V +++LI G   + D +  +  L  
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           MEE  + P+V+ +S+I+D ++  GL+ +  ++   MV+  I P++ V+  L  GY +A +
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
              A  +   M+  G+  N  +  + ++    + +M+ A  +++ M   G+ P+   Y +
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 386 LLWGYGEAKQPWRAEELLQVMEEK 409
           ++ G+ +A +   A  + Q M EK
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEK 396



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 146/341 (42%), Gaps = 18/341 (5%)

Query: 2   NILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NILV +    G+  +   + N ++  G  PT  T+  ++ A ++ +R   IL +  ++  
Sbjct: 475 NILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVG 534

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+K D   +N +I+     G +  A  +F+ M   G      TYN LI GY      ++
Sbjct: 535 MGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKK 594

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +  +   M  +  V PN  TYNIL+    +   I+EA  +V +M   G+ P+A TY+ L 
Sbjct: 595 AFAVHSQMLTE-GVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILV 653

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
             + + G      ++  EM      P  RT  +++S + K   M  A   +  M+   + 
Sbjct: 654 SGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIP 713

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTL------------MEEFGVKPDVVTFSTIMDAW 285
           PN   ++ LI G+  +     ++K+L              M E G  P   T + I    
Sbjct: 714 PNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTL 773

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
           +  G     Q I + + K     ++ +  +L +   R G+P
Sbjct: 774 AKPGKKADAQRILNKLYKKKTVQEL-LAGVLWESRERKGKP 813



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 115/260 (44%), Gaps = 36/260 (13%)

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           R L   +  E+  ++  FN LI G+    +     + L  M+  G  PD+VT++T+M+ +
Sbjct: 3   RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
              G +   +++  ++    +EP++  ++ L   Y ++   + A  +   M    + P+V
Sbjct: 63  CKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDV 122

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET-------------------- 385
           V +T +++G C + K++ A S++ +M E+G+ PN  +Y T                    
Sbjct: 123 VTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGR 182

Query: 386 ---------------LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
                          L+ G  +A     AE++ QV+ E+ + P   T   + D    +G 
Sbjct: 183 MVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGD 242

Query: 431 AREAKRVLKSAEEDRQSMPN 450
             + + +L+  EE +   PN
Sbjct: 243 VNKGELLLQEMEE-KHIFPN 261


>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 855

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 183/350 (52%), Gaps = 5/350 (1%)

Query: 66  LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
           ++N MI   +     D+A  +F +M+   CKP   TYN LI  +G  G+   ++ ++  M
Sbjct: 152 IYNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 211

Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
            +   + P+  TYN L+ A  S  + +EA NV  KM  +G+ PD VT+N +  A+ + G 
Sbjct: 212 LRAA-IPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAF-KSGT 269

Query: 186 TYRAEQMLFEM-QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE--LEVHPNLVV 242
            Y      FE+ +   +RP+  T  II+    K    + A+     MKE   E HP++V 
Sbjct: 270 QYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVT 329

Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
           F S+I  +      +  + A  +M   G+KP++V+++ ++ A+++ G+  +  ++F+++ 
Sbjct: 330 FTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIK 389

Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
           + G  PD+  ++ L   Y R+ +PQKA  I   +++  + PN+V +  +I  + +   ++
Sbjct: 390 QNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLE 449

Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
            A+ I  +M +  I+PN+ +  TLL   G   Q  + + +L   E +G++
Sbjct: 450 DAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIK 499



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/522 (22%), Positives = 239/522 (45%), Gaps = 27/522 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N     G   EA  +   + + G  P L+T+  ++ A     ++   LS    ++   +
Sbjct: 227 INACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHI 286

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKD--SGCKPTTSTYNTLIKGYGNVGKPEES 118
           +PD+   N +I+   +    D+A+ IF  MK+  S C P   T+ ++I  Y   G  E  
Sbjct: 287 RPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENC 346

Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
                +M  +  +KPN  +YN L+ A+ ++    EA  V  ++  +G +PD V+Y +L  
Sbjct: 347 EAAFNMMLAE-GLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLN 405

Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
           AY +  +  +A ++   ++ N ++PN  +   ++  Y   G +EDA+  L  M++ ++HP
Sbjct: 406 AYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHP 465

Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
           N+V   +L+           +D  L+  E  G+K + V +++ + ++ + G   K  +++
Sbjct: 466 NVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLY 525

Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
           + M K  I+ D   +++L  G  +  +  +A S +  M    +  +  +++++I  +   
Sbjct: 526 NSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQ 585

Query: 359 V----KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
                ++  A S +  M  +G +P++ TY  +L  Y  A++  +   L + MEE  V  K
Sbjct: 586 ASALGQIIEAESTFNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDV--K 643

Query: 415 KSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFL 474
             TI   A   RA     +  RVL  A    QSM             R++++  S++ F 
Sbjct: 644 LDTIACAA-LMRAFNKGGQPGRVLSLA----QSM-------------REKDIPLSDTIFF 685

Query: 475 QIPGVVSSEHNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYG 516
           ++       H+  +A  +   +      + +   +LF+N+ G
Sbjct: 686 EMVSACGLLHDWKTAVDMIKYMEPSLPVISSGCLNLFLNSLG 727



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 114/479 (23%), Positives = 219/479 (45%), Gaps = 63/479 (13%)

Query: 17  FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
           FN ++ EG +P +++Y  L+ A   +      L + ++++++G +PD + + +++NA   
Sbjct: 350 FNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGR 409

Query: 77  SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
           S    +A +IF+ +K +  KP   +YN LI  YG+ G  E+++++L+ M QDK + PN  
Sbjct: 410 SRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDK-IHPNVV 468

Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMV-ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
           +   L+ A C +   +   + V       GI+ + V YN+   +Y   GE  +A  +   
Sbjct: 469 SICTLLAA-CGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNS 527

Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
           M+  +++ +  T  +++SG CK     +A+ F+  M  L++  +  V++S+I  +     
Sbjct: 528 MRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQAS 587

Query: 256 SDG----VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
           + G     +    LM+  G  PDVVT++ ++DA+++A    K   +F++M +  ++ D  
Sbjct: 588 ALGQIIEAESTFNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTI 647

Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG------WCNAVKMQRAM 365
             + L + + + G+P +  S+  SMR+  +  +  +F  ++S       W  AV M + M
Sbjct: 648 ACAALMRAFNKGGQPGRVLSLAQSMREKDIPLSDTIFFEMVSACGLLHDWKTAVDMIKYM 707

Query: 366 S-----------------------------IYEKMCEIGINPNLKTYETLL--------W 388
                                         ++ KM   G   N  TY  LL        W
Sbjct: 708 EPSLPVISSGCLNLFLNSLGKSGKIEIMLKLFFKMLASGAEVNFNTYSILLKNLLSSGNW 767

Query: 389 -GYGE------------AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
             Y E            +KQ      +LQ ME+ G+ P     + ++ S +  G+   A
Sbjct: 768 RKYLEDNSVAAVMCFLLSKQLAMDARVLQWMEDAGIHPSNEMYRDISFSQKNCGVENAA 826



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 114/520 (21%), Positives = 227/520 (43%), Gaps = 58/520 (11%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           +P   TY  L+ A  R  +++  ++++  + +  + P    +N +INAC  SGN  EA+ 
Sbjct: 182 KPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALN 241

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           + +KM D+G  P   T+N ++  + +  +  ++L   +L+ +  +++P+  T+NI++   
Sbjct: 242 VCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELI-KGTHIRPDTTTHNIIIHCL 300

Query: 146 CSKNSIEEAWNVVYKMV--ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
                 ++A ++   M    S   PD VT+ ++   Y+  G     E     M    ++P
Sbjct: 301 VKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKP 360

Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
           N  +   ++  Y   G   +A++    +K+    P++V + SL+  +   +      +  
Sbjct: 361 NIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIF 420

Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD-IHVFSILAK---- 318
            +++   +KP++V+++ ++DA+ S GL+    EI  +M +  I P+ + + ++LA     
Sbjct: 421 KMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRC 480

Query: 319 ------------------------------GYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
                                          Y+  GE  KA  +  SMRK  +  + V +
Sbjct: 481 GQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTY 540

Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK----QPWRAEELLQ 404
           T +ISG C   K   A+S  E+M  + +  + + Y +++  Y +      Q   AE    
Sbjct: 541 TVLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQASALGQIIEAESTFN 600

Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQ 464
           +M+  G  P   T   + D++ A     +   + +  EE+      K D IA  ++ R  
Sbjct: 601 LMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDV----KLDTIACAALMRAF 656

Query: 465 NLSASNSTFLQIPGVVSSEHNGSSAAKIRSQIVLRSDTVW 504
           N           PG V      S A  +R + +  SDT++
Sbjct: 657 NKGGQ-------PGRVL-----SLAQSMREKDIPLSDTIF 684



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/346 (23%), Positives = 162/346 (46%), Gaps = 8/346 (2%)

Query: 105 LIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS 164
           LI+     G  E    +   M   KN       YN+++R     N  ++A  + ++M   
Sbjct: 120 LIRELTQRGSIEHCNLVFSWMKNQKNYCARTDIYNMMIRLHARHNRTDQARGLFFEMQKC 179

Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
             +PDA TYN L  A+ + G+   A  ++ +M    + P+  T   +++     GN ++A
Sbjct: 180 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 239

Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALT---LMEEFGVKPDVVTFSTI 281
           +    +M +  V P+LV  N ++  F   K      KAL+   L++   ++PD  T + I
Sbjct: 240 LNVCKKMTDNGVGPDLVTHNIMLTAF---KSGTQYSKALSYFELIKGTHIRPDTTTHNII 296

Query: 282 MDAWSSAGLMGKCQEIFDDMV--KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
           +          K  +IF+ M   K+   PD+  F+ +   Y   G  +  E+    M   
Sbjct: 297 IHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAE 356

Query: 340 GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRA 399
           G+ PN+V +  ++  +        A+ ++ ++ + G  P++ +Y +LL  YG +++P +A
Sbjct: 357 GLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKA 416

Query: 400 EELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
            E+ ++++   ++P   +   + D++ + GL  +A  +L+  E+D+
Sbjct: 417 REIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDK 462


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/471 (23%), Positives = 217/471 (46%), Gaps = 39/471 (8%)

Query: 7   KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
           KG  +EA  +   +++    P +  Y TL+    +  +    L L  +++  G++ ++ +
Sbjct: 275 KGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFV 334

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
            ++ +N    SG ++EA ++F+ M   G  P    Y +++ G+   GK  ++  + Q M+
Sbjct: 335 IDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMT 394

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIE-EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
           + K+   +   YN+L+         E E+++    M   G+ PD+ T+NT+  AY + G 
Sbjct: 395 E-KSSGFDVVAYNVLINGLFKLGKYESESFHT--GMRQLGLAPDSATFNTMINAYCKEGN 451

Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
              A ++L EM++  ++PN  TC I+V   C  G +E  M  L  M  +  HP      +
Sbjct: 452 LGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKA 511

Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
           ++      + +D +      +   GVK D+ T++T++  +   G++ +   +F DM+  G
Sbjct: 512 VLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKG 571

Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
           I  DI  ++ L  GY  +   +KA ++ + M   GV PNV  +  ++ G   A  ++ A 
Sbjct: 572 ILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAA 631

Query: 366 SIYEKMCEIGINPNLKTYETLLWGYG---------------------------------- 391
            +  +M E G+ PN  TY+ L+ G+G                                  
Sbjct: 632 GLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCF 691

Query: 392 -EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
            + K+  +A+EL+Q M+ +G+ P  ST  ++   W  +    E  + LK +
Sbjct: 692 AKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRS 742



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/444 (23%), Positives = 206/444 (46%), Gaps = 15/444 (3%)

Query: 67  FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
           FN +I+    +G +  A+++ + MK  G  P   TYNTL+ G+  +G    + KL+  +S
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
              N++PN  TY  L+ A+C    +E+A  +  +M    + PD VTY  +     + G+ 
Sbjct: 80  L-VNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKV 138

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
             A+ +  EM+   V PN  +   ++    KEGN+ +A     RM    +  ++VV+ +L
Sbjct: 139 EEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTAL 198

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
           + G      ++  +    ++ E  + P+ VT+S ++D     G + K + +  +M +  I
Sbjct: 199 MDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHI 258

Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
            P++ V+S +  GY + G   +A  ++  M +  + PNV ++ T+I G+  A +   A+ 
Sbjct: 259 FPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALD 318

Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
           ++++M   G+  N    ++ +     + +   A+EL + M  +G+ P +     + D + 
Sbjct: 319 LFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFF 378

Query: 427 AIGLAREAKRVLKSAEEDRQSMPNKKDEIAV-----------ESIH---RKQNLSASNST 472
             G   +A  + +   E           + +           ES H   R+  L+  ++T
Sbjct: 379 KAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSAT 438

Query: 473 FLQIPGVVSSEHNGSSAAKIRSQI 496
           F  +      E N  +A K+ +++
Sbjct: 439 FNTMINAYCKEGNLGNALKLLNEM 462



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 196/406 (48%), Gaps = 8/406 (1%)

Query: 27  PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
           P +ITYTTL+ A  + +  +  L +  ++    + PD + +  ++N   +SG V+EA  +
Sbjct: 85  PNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSV 144

Query: 87  FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
           F++M++ G  P   +Y TLI      G   E+  +LQ     + +  +   Y  L+    
Sbjct: 145 FREMEEVGVVPNRFSYATLIDSLFKEGNVAEAF-VLQGRMVVRGIGFDVVVYTALMDGLF 203

Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
                  A ++   ++   + P+ VTY+ L   + + G+  + E +L EM+   + PN  
Sbjct: 204 KAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVI 263

Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
               IV GY K+G + +AM  + +M +  + PN+ V+ +LI G+    D  G+  AL L 
Sbjct: 264 VYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFK-ADQRGI--ALDLF 320

Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
           +E    G++ +     + ++    +G M +  E+F DM+  G+ PD   ++ +  G+ +A
Sbjct: 321 KEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKA 380

Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
           G+   A +I   M +     +VV +  +I+G     K + + S +  M ++G+ P+  T+
Sbjct: 381 GKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATF 439

Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIG 429
            T++  Y +      A +LL  M+  G++P   T  ++     A G
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAG 485



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/519 (24%), Positives = 222/519 (42%), Gaps = 71/519 (13%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           MN L   GK  EA  +F  + E G  P   +Y TL+ +L ++        L  ++   G+
Sbjct: 129 MNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI 188

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D +++ A+++   ++G  + A  +FQ + +    P   TY+ LI G+  +G   +   
Sbjct: 189 GFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGEL 248

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LLQ M ++K++ PN   Y+ +V  +  K  + EA +V+ KMV   I P+   Y TL   Y
Sbjct: 249 LLQEM-EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGY 307

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            +  +   A  +  EM++  +  N       V+   + G ME+A      M    + P+ 
Sbjct: 308 FKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDR 367

Query: 241 VVFNSLIKGFLDI-KDSDGVDKAL---------------------------------TLM 266
           V + S++ GF    K+SD  + A                                  T M
Sbjct: 368 VNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGM 427

Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
            + G+ PD  TF+T+++A+   G +G   ++ ++M   G++P+    +IL +    AGE 
Sbjct: 428 RQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEI 487

Query: 327 QKAESILTSMRKYGVHP------------------NVVM-----------------FTTV 351
           +K   +L  M   G HP                  +V++                 + T+
Sbjct: 488 EKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTL 547

Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
           IS +C    ++RA  +++ M   GI  ++ TY  L+ GY  +    +A  +   M  +GV
Sbjct: 548 ISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGV 607

Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
            P   T  ++     A  L +EA  ++   +E R  +PN
Sbjct: 608 SPNVETYNILLGGLSAARLIKEAAGLVNQMKE-RGLVPN 645



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/456 (24%), Positives = 213/456 (46%), Gaps = 26/456 (5%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +N L   G+  EA  +F  ++  G  P  + YT+++    +  +     ++  ++ +   
Sbjct: 339 VNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSS 398

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
             D + +N +IN   + G   E+      M+  G  P ++T+NT+I  Y   G    +LK
Sbjct: 399 GFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALK 457

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
           LL  M +   +KPN  T NILV+  C+   IE+  +++  M+  G  P   T+  +  A 
Sbjct: 458 LLNEM-KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDAS 516

Query: 181 AQYGETYRAEQMLF---EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
           ++   + RA+ +L    ++    V+ +  T   ++S +C+ G +  A      M    + 
Sbjct: 517 SK---SRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGIL 573

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKC 294
            +++ +N+LI G+     S  + KA  +  +    GV P+V T++ ++   S+A L+ + 
Sbjct: 574 ADIITYNALIHGYCI---SSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEA 630

Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
             + + M + G+ P+   + IL  G+ + G  ++   +   M   G  P    +  +IS 
Sbjct: 631 AGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISC 690

Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG-YGEAKQP-----------WRAEEL 402
           +    KM +A  + ++M   GI PN  TY+ L+ G Y  +KQP             A+ L
Sbjct: 691 FAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRL 750

Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
            + M EKG  P ++T+  ++ +    G   +A+R+L
Sbjct: 751 FEEMNEKGFIPCENTLACISFTLAKPGKKADAQRIL 786



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/403 (23%), Positives = 191/403 (47%), Gaps = 2/403 (0%)

Query: 23  EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
           EG  P ++TY TL+    +     +   L+ ++    ++P+ I +  +I+A  +S  +++
Sbjct: 46  EGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLED 105

Query: 83  AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
           A+ ++ +M      P   TY  ++ G    GK EE+  + + M ++  V PN  +Y  L+
Sbjct: 106 ALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREM-EEVGVVPNRFSYATLI 164

Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
            +   + ++ EA+ +  +MV  GI  D V Y  L     + G    AE M   +    + 
Sbjct: 165 DSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLV 224

Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
           PN  T   ++ G+CK G++      L  M+E  + PN++V++S++ G+      +     
Sbjct: 225 PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDV 284

Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
           +  M +  + P+V  + T++D +  A   G   ++F +M   G+E +  V         R
Sbjct: 285 MRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKR 344

Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
           +G  ++A+ +   M   G+ P+ V +T+++ G+  A K   A +I ++M E     ++  
Sbjct: 345 SGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVA 404

Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
           Y  L+ G  +  + + +E     M + G+ P  +T   + +++
Sbjct: 405 YNVLINGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINAY 446



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/360 (23%), Positives = 159/360 (44%), Gaps = 36/360 (10%)

Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
           Q   ++ +   +N+L+  +C    I  A  ++  M   G  PD VTYNTL   + + G+ 
Sbjct: 9   QHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDL 68

Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
           + A++++ E+    + PN  T   ++  YCK   +EDA+     M    + P++V +  +
Sbjct: 69  FTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCI 128

Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKP--------------------------------- 273
           + G       +        MEE GV P                                 
Sbjct: 129 MNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI 188

Query: 274 --DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
             DVV ++ +MD    AG+    +++F  +++  + P+   +S L  G+ + G+  K E 
Sbjct: 189 GFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGEL 248

Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
           +L  M +  + PNV+++++++ G+     +  AM +  KM +  I PN+  Y TL+ GY 
Sbjct: 249 LLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYF 308

Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
           +A Q   A +L + M+ +G+      I    ++ +  G   EA  + K     R  +P++
Sbjct: 309 KADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMS-RGLLPDR 367



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 180/384 (46%), Gaps = 1/384 (0%)

Query: 26  RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
           R ++  +  L+    R       + L+  ++ +G  PD + +N ++N   + G++  A K
Sbjct: 14  RRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKK 73

Query: 86  IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
           +  ++     +P   TY TLI  Y      E++L +   M+  K++ P+  TY  ++   
Sbjct: 74  LMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTV-KSLVPDVVTYTCIMNGL 132

Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
           C    +EEA +V  +M   G+ P+  +Y TL  +  + G    A  +   M    +  + 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
                ++ G  K G   +A      + E  + PN V +++LI G   + D +  +  L  
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
           MEE  + P+V+ +S+I+D ++  GL+ +  ++   MV+  I P++ V+  L  GY +A +
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
              A  +   M+  G+  N  +  + ++    + +M+ A  +++ M   G+ P+   Y +
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 386 LLWGYGEAKQPWRAEELLQVMEEK 409
           ++ G+ +A +   A  + Q M EK
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEK 396



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 138/322 (42%), Gaps = 17/322 (5%)

Query: 2   NILVGK----GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
           NILV +    G+  +   + N ++  G  PT  T+  ++ A ++ +R   IL +  ++  
Sbjct: 475 NILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVG 534

Query: 58  DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
            G+K D   +N +I+     G +  A  +F+ M   G      TYN LI GY      ++
Sbjct: 535 MGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKK 594

Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
           +  +   M  +  V PN  TYNIL+    +   I+EA  +V +M   G+ P+A TY+ L 
Sbjct: 595 AFAVHSQMLTE-GVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILV 653

Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
             + + G      ++  EM      P  RT  +++S + K   M  A   +  M+   + 
Sbjct: 654 SGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIP 713

Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTL------------MEEFGVKPDVVTFSTIMDAW 285
           PN   ++ LI G+  +     ++K+L              M E G  P   T + I    
Sbjct: 714 PNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTL 773

Query: 286 SSAGLMGKCQEIFDDMVKAGIE 307
           +  G     Q I + + K  ++
Sbjct: 774 AKPGKKADAQRILNKLYKKKVK 795



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 115/260 (44%), Gaps = 36/260 (13%)

Query: 226 RFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAW 285
           R L   +  E+  ++  FN LI G+    +     + L  M+  G  PD+VT++T+M+ +
Sbjct: 3   RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
              G +   +++  ++    +EP++  ++ L   Y ++   + A  +   M    + P+V
Sbjct: 63  CKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDV 122

Query: 346 VMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET-------------------- 385
           V +T +++G C + K++ A S++ +M E+G+ PN  +Y T                    
Sbjct: 123 VTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGR 182

Query: 386 ---------------LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGL 430
                          L+ G  +A     AE++ QV+ E+ + P   T   + D    +G 
Sbjct: 183 MVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGD 242

Query: 431 AREAKRVLKSAEEDRQSMPN 450
             + + +L+  EE +   PN
Sbjct: 243 VNKGELLLQEMEE-KHIFPN 261


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/445 (24%), Positives = 207/445 (46%), Gaps = 4/445 (0%)

Query: 1   MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
           +  L   G+  +AH +F+   E    P ++TY  +V         ++ + L+S++   G+
Sbjct: 260 LKALCTAGRIKDAHQLFD---EMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGL 316

Query: 61  KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
           + + + + ++I    + G V +A+++ + M   G     + + T++ G+   G    +  
Sbjct: 317 ELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARN 376

Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
               M Q + +  +  TY  L+   C    ++EA  V+ +M   G+  DAVTY  L   Y
Sbjct: 377 WFDEM-QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY 435

Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
            + G+   A  +  +M   +V PN  T   +  G CK+G++  A   L+ M    +  N+
Sbjct: 436 CKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNI 495

Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
             +NSLI G     + +   + +  M+E G+KPDV T++TI+ A   +  + +   +  +
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQE 555

Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
           M+  GI+P I  +++L  G+  +G  +  + +L  M +  +HPN   + +++  +C    
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615

Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
           M+    IY+ M    + PN  TY  L+ G+ +A+    A      M EKG R   S+   
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNA 675

Query: 421 VADSWRAIGLAREAKRVLKSAEEDR 445
           +           EA+R+ +   ++R
Sbjct: 676 LIRLLNKKKKFTEARRLFEKMRKER 700



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 201/389 (51%), Gaps = 12/389 (3%)

Query: 51  LISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYG 110
           L+ ++ + G+ P     NA++  C     +DEA+++FQ++ +      T +YN L+K   
Sbjct: 213 LLLRLRQYGISPSPESCNAVL--CRLP--LDEAVQLFQELPEKN----TCSYNILLKALC 264

Query: 111 NVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDA 170
             G+ +++ +L   M+      P+  TY I+V  +C+ + +E A  ++ +M A G++ + 
Sbjct: 265 TAGRIKDAHQLFDEMAS----PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNP 320

Query: 171 VTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
           V Y ++       G+   A +++ +M  + V  +      ++SG+C++G++  A  +   
Sbjct: 321 VAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDE 380

Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
           M++  +  + V + +LI G     +    ++ L  ME+ G+  D VT++ ++D +   G 
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440

Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
           M +   + + MV+  + P++  ++ L+ G  + G+   A  +L  M   G+  N+  + +
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500

Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
           +I+G C A  +++AM     M E G+ P++ TY T++    ++K+  RA  LLQ M +KG
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560

Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVLK 439
           ++P   T  ++ + +   G     KR+L+
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/411 (23%), Positives = 177/411 (43%), Gaps = 40/411 (9%)

Query: 3   ILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
           +L  +G+  +A  +   ++  G       +TT+++   R+    +  +   +++K G+  
Sbjct: 329 LLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAA 388

Query: 63  DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
           D + + A+IN    +G + EA ++ Q+M+D G      TY  LI GY  VGK  E+  + 
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448

Query: 123 QLMSQDKNVKPN-----------------------------------DRTYNILVRAWCS 147
             M Q K V PN                                     TYN L+   C 
Sbjct: 449 NKMVQ-KRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCK 507

Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
             ++E+A   +  M  +G++PD  TY T+  A  Q  E  RA  +L EM +  ++P   T
Sbjct: 508 AGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVT 567

Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLME 267
             ++++G+C  G +E   R L  M E  +HPN   +NSL+K +   K+     +    M 
Sbjct: 568 YNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGML 627

Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
              V P+  T++ ++     A  M +      +M++ G       ++ L +   +  +  
Sbjct: 628 SQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFT 687

Query: 328 KAESILTSMRK--YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
           +A  +   MRK      P+V  F   +S   N   ++  +++ +++ E+ +
Sbjct: 688 EARRLFEKMRKERLTAEPDVYNFYIDLSF--NEDNLESTLALCDELVEVTL 736


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.318    0.132    0.386 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,070,662,266
Number of Sequences: 23463169
Number of extensions: 315812694
Number of successful extensions: 1146925
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9965
Number of HSP's successfully gapped in prelim test: 3444
Number of HSP's that attempted gapping in prelim test: 867211
Number of HSP's gapped (non-prelim): 90971
length of query: 548
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 400
effective length of database: 8,886,646,355
effective search space: 3554658542000
effective search space used: 3554658542000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)