BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008925
(548 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8S9D1|PP395_ARATH Pentatricopeptide repeat-containing protein At5g21222
OS=Arabidopsis thaliana GN=ATC401 PE=2 SV=1
Length = 831
Score = 637 bits (1643), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 292/433 (67%), Positives = 367/433 (84%), Gaps = 2/433 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
MN L+ +G+P EAH IFN LIEEGH+P+LITYTTLV ALTRQK F S+LSLISKVEK+G+
Sbjct: 326 MNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGL 385
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
KPD+ILFNA+INA SESGN+D+AMKIF+KMK+SGCKPT ST+NTLIKGYG +GK EES +
Sbjct: 386 KPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSR 445
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
LL +M +D+ ++PNDRT NILV+AWC++ IEEAWN+VYKM + G++PD VT+NTLA+AY
Sbjct: 446 LLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAY 505
Query: 181 AQYGETYRAEQMLF-EMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
A+ G T AE M+ M +N+V+PN RTCG IV+GYC+EG ME+A+RF YRMKEL VHPN
Sbjct: 506 ARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPN 565
Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
L VFNSLIKGFL+I D DGV + + LMEEFGVKPDVVTFST+M+AWSS G M +C+EI+
Sbjct: 566 LFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYT 625
Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
DM++ GI+PDIH FSILAKGY RAGEP+KAE IL MRK+GV PNVV++T +ISGWC+A
Sbjct: 626 DMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAG 685
Query: 360 KMQRAMSIYEKMCEI-GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
+M++AM +Y+KMC I G++PNL TYETL+WG+GEAKQPW+AEELL+ ME K V P + T+
Sbjct: 686 EMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTM 745
Query: 419 QLVADSWRAIGLA 431
QL+AD W++IG++
Sbjct: 746 QLIADGWKSIGVS 758
Score = 202 bits (515), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/374 (30%), Positives = 202/374 (54%), Gaps = 7/374 (1%)
Query: 70 MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ-D 128
++N E G EA IF + + G KP+ TY TL+ + + + LL L+S+ +
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTA---LTRQKHFHSLLSLISKVE 381
Query: 129 KN-VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
KN +KP+ +N ++ A ++++A + KM SG +P A T+NTL + Y + G+
Sbjct: 382 KNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLE 441
Query: 188 RAEQML-FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
+ ++L +++ ++PN+RTC I+V +C + +E+A +Y+M+ V P++V FN+L
Sbjct: 442 ESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTL 501
Query: 247 IKGFLDIKDS-DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
K + I + D + M VKP+V T TI++ + G M + F M + G
Sbjct: 502 AKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELG 561
Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
+ P++ VF+ L KG++ + ++ M ++GV P+VV F+T+++ W + M+R
Sbjct: 562 VHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCE 621
Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
IY M E GI+P++ + L GY A +P +AE++L M + GVRP + W
Sbjct: 622 EIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGW 681
Query: 426 RAIGLAREAKRVLK 439
+ G ++A +V K
Sbjct: 682 CSAGEMKKAMQVYK 695
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 77/153 (50%), Gaps = 1/153 (0%)
Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
DV + + +M+ G + IF+ +++ G +P + ++ L R S++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
+ + K G+ P+ ++F +I+ + + +AM I+EKM E G P T+ TL+ GYG+
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 394 KQPWRAEELLQVM-EEKGVRPKKSTIQLVADSW 425
+ + LL +M ++ ++P T ++ +W
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAW 470
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 100/241 (41%), Gaps = 24/241 (9%)
Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
D+ + L G + G PQ+A SI ++ + G P+++ +TT+++ +S+
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
K+ + G+ P+ + ++ E+ +A ++ + M+E G +P ST + + I
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 429 GLAREAKRVLKSAEEDRQSMPNKKD-EIAVES------IHRKQNLSASNSTFLQIPGVVS 481
G E+ R+L D PN + I V++ I N+ ++ P VV+
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 482 SEHNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQPMVVCRKQCSQVGTCGQFVNA 541
+ A+I S TA + + V+P V TCG VN
Sbjct: 498 FNTLAKAYARIGSTC--------TAEDMIIPRMLHNKVKP---------NVRTCGTIVNG 540
Query: 542 Y 542
Y
Sbjct: 541 Y 541
>sp|Q8GZ63|PP397_ARATH Pentatricopeptide repeat-containing protein At5g25630
OS=Arabidopsis thaliana GN=At5g25630 PE=2 SV=2
Length = 574
Score = 548 bits (1413), Expect = e-155, Method: Compositional matrix adjust.
Identities = 276/547 (50%), Positives = 380/547 (69%), Gaps = 36/547 (6%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
MN+L+ +G+PHEA +F L E GHRP+LI+YTTL+AA+T QK++ SI S++S+VE+ G
Sbjct: 52 MNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGT 111
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
K DSI FNA+INA SESGN+++A++ KMK+ G PTTSTYNTLIKGYG GKPE S +
Sbjct: 112 KLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSE 171
Query: 121 LLQLMSQDKNVK--PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
LL LM ++ NV PN RT+N+LV+AWC K +EEAW VV KM G++PD VTYNT+A
Sbjct: 172 LLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIAT 231
Query: 179 AYAQYGETYRAEQMLFE--MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
Y Q GET RAE + E + + +PN RTCGI+V GYC+EG + D +RF+ RMKE+ V
Sbjct: 232 CYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRV 291
Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
NLVVFNSLI GF+++ D DG+D+ LTLM+E VK DV+T+ST+M+AWSSAG M K +
Sbjct: 292 EANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQ 351
Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
+F +MVKAG++PD H +SILAKGYVRA EP+KAE +L ++ PNVV+FTTVISGWC
Sbjct: 352 VFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWC 410
Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
+ M AM ++ KMC+ G++PN+KT+ETL+WGY E KQPW+AEE+LQ+M GV+P+ S
Sbjct: 411 SNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENS 470
Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIA-VESIHRKQNLSASNSTFLQ 475
T L+A++WR GL E+ + + ++ K EIA +E +++KQ+ S S+ LQ
Sbjct: 471 TFLLLAEAWRVAGLTDESNKAI-------NALKCKDIEIAKLEKLYQKQS-SGSSFNLLQ 522
Query: 476 IPGVVSSEHNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQPMVVCRKQC-SQVGT 534
IP + + TA K++ ++ G + ++C+KQ +Q G
Sbjct: 523 IP--------------------VGKRELPTA-KAMNLSACKLGARVPIICQKQSQAQFGI 561
Query: 535 CGQFVNA 541
GQFV++
Sbjct: 562 SGQFVHS 568
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 156/322 (48%), Gaps = 15/322 (4%)
Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA---Q 182
S + V+ + N+L+ + EA V + +G +P ++Y TL A Q
Sbjct: 40 SSCRTVRSRTKLMNVLIE----RGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQ 95
Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
YG ++ E++ + + + +++ + + GNMEDA++ L +MKEL ++P
Sbjct: 96 YGSI---SSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTST 152
Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFG---VKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
+N+LIKG+ + + L LM E G V P++ TF+ ++ AW + + E+
Sbjct: 153 YNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVK 212
Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS--MRKYGVHPNVVMFTTVISGWCN 357
M + G+ PD ++ +A YV+ GE +AES + + K PN V+ G+C
Sbjct: 213 KMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCR 272
Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
+++ + +M E+ + NL + +L+ G+ E +E+L +M+E V+ T
Sbjct: 273 EGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVIT 332
Query: 418 IQLVADSWRAIGLAREAKRVLK 439
V ++W + G +A +V K
Sbjct: 333 YSTVMNAWSSAGYMEKAAQVFK 354
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
+ +M+ G + Q +F + + G P + ++ L + SI++ + +
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
G + + F VI+ + + M+ A+ KM E+G+NP TY TL+ GYG A +P R
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 399 AEELLQVMEEKG---VRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
+ ELL +M E+G V P T ++ +W EA V+K EE
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEE 216
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 225 bits (574), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 223/434 (51%), Gaps = 7/434 (1%)
Query: 8 GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
G+ EAH++ + +G+ P +I+Y+T+V R + LI +++ G+KP+S ++
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319
Query: 68 NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
++I + EA + F +M G P T Y TLI G+ G + K M
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM-H 378
Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
+++ P+ TY ++ +C + EA + ++M G++PD+VT+ L Y + G
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
A ++ M PN T ++ G CKEG+++ A L+ M ++ + PN+ +NS++
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
G + S +++A+ L+ EF G+ D VT++T+MDA+ +G M K QEI +M+
Sbjct: 499 NG---LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
G++P I F++L G+ G + E +L M G+ PN F +++ +C ++ A
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
+IY+ MC G+ P+ KTYE L+ G+ +A+ A L Q M+ KG ST ++
Sbjct: 616 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Query: 425 WRAIGLAREAKRVL 438
+ EA+ V
Sbjct: 676 FLKRKKFLEAREVF 689
Score = 169 bits (427), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 186/356 (52%), Gaps = 1/356 (0%)
Query: 83 AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
A+ +F++ + G ++YN +I +G+ +E+ LL LM + K P+ +Y+ +V
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLM-ELKGYTPDVISYSTVV 288
Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
+C +++ W ++ M G++P++ Y ++ + + AE+ EM +
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
P+ ++ G+CK G++ A +F Y M ++ P+++ + ++I GF I D K
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 263 LTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVR 322
M G++PD VTF+ +++ + AG M + + M++AG P++ ++ L G +
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
G+ A +L M K G+ PN+ + ++++G C + ++ A+ + + G+N + T
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
Y TL+ Y ++ + +A+E+L+ M KG++P T ++ + + G+ + +++L
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 182/395 (46%), Gaps = 1/395 (0%)
Query: 45 FKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNT 104
F L+ KD D +F+ + G + EA ++F+KM + G + + N
Sbjct: 157 FVQFFDLLVYTYKD-WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNV 215
Query: 105 LIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS 164
+ + ++ + V N +YNI++ C I+EA +++ M
Sbjct: 216 YLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK 275
Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
G PD ++Y+T+ Y ++GE + +++ M+ ++PN G I+ C+ + +A
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
M + P+ VV+ +LI GF D K M + PDV+T++ I+
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
+ G M + ++F +M G+EPD F+ L GY +AG + A + M + G PN
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 345 VVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQ 404
VV +TT+I G C + A + +M +IG+ PN+ TY +++ G ++ A +L+
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 405 VMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
E G+ T + D++ G +A+ +LK
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 150/336 (44%), Gaps = 36/336 (10%)
Query: 27 PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
P ++TYT +++ + L ++ G++PDS+ F +IN ++G++ +A ++
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
Query: 87 FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
M +GC P TY TLI G G + + +LL M + ++PN TYN +V C
Sbjct: 444 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK-IGLQPNIFTYNSIVNGLC 502
Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
+IEEA +V + A+G+ D VTY TL AY + GE +A+++L EM ++P
Sbjct: 503 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 562
Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
T ++++G+C G +ED + L M + PN FNSL+K + + M
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Query: 267 EEFGVKPD-----------------------------------VVTFSTIMDAWSSAGLM 291
GV PD V T+S ++ +
Sbjct: 623 CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKF 682
Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
+ +E+FD M + G+ D +F + + P
Sbjct: 683 LEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPD 718
Score = 105 bits (262), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 133/304 (43%), Gaps = 40/304 (13%)
Query: 4 LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
L +G A+ + + + + G +P + TY ++V L + + + L+ + E G+ D
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 64 SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
++ + +++A +SG +D+A +I ++M G +PT T+N L+ G+ G E+ KLL
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
M K + PN T+N LV+ +C +N+++ A + M + G+ PD TY L
Sbjct: 586 WMLA-KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL------- 637
Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
V G+CK NM++A MK ++ +
Sbjct: 638 ----------------------------VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
+ LIKGFL K + M G+ D I D +S GK + D +
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQMRREGLAAD----KEIFDFFSDTKYKGKRPDTIVDPID 725
Query: 304 AGIE 307
IE
Sbjct: 726 EIIE 729
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 1/197 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+N L G EA + G +TYTTL+ A + ++ ++ G+
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
+P + FN ++N G +++ K+ M G P +T+N+L+K Y + +
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
+ + M + V P+ +TY LV+ C +++EAW + +M G TY+ L + +
Sbjct: 618 IYKDMCS-RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676
Query: 181 AQYGETYRAEQMLFEMQ 197
+ + A ++ +M+
Sbjct: 677 LKRKKFLEAREVFDQMR 693
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 216/413 (52%), Gaps = 1/413 (0%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K EA + + ++ G +P L TY T+V L ++ LSL+ K+EK ++ D +++
Sbjct: 200 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
+I+A NV++A+ +F +M + G +P TYN+LI+ N G+ ++ +LL M +
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
K + PN T++ L+ A+ + + EA + +M+ I PD TY++L + +
Sbjct: 320 K-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
A+ M M + PN T ++ G+CK +E+ M M + + N V +N+LI+
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
G D D K M GV PD++T+S ++D G + K +F+ + K+ +EP
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
DI+ ++I+ +G +AG+ + + S+ GV PNV+++TT+ISG+C + A +++
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558
Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
+M E G PN TY TL+ + EL++ M G STI +V
Sbjct: 559 REMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 611
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 215/437 (49%), Gaps = 1/437 (0%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K +A +F +++ P+++ + L++A+ + +F ++SL +++ + D +N
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
+IN + A+ + KM G +P T ++L+ GY + + E++ L+ M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV- 178
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
+PN T+N L+ N EA ++ +MVA G QPD TY T+ + G+
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
A +L +M+ ++ + I+ C N+ DA+ M + PN+V +NSLI+
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
+ + L+ M E + P+VVTFS ++DA+ G + + ++++D+M+K I+P
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
DI +S L G+ +A+ + M PNVV + T+I G+C A +++ M ++
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
+M + G+ N TY TL+ G +A A+++ + M GV P T ++ D
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 429 GLAREAKRVLKSAEEDR 445
G +A V + ++ +
Sbjct: 479 GKLEKALVVFEYLQKSK 495
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 219/431 (50%), Gaps = 2/431 (0%)
Query: 20 LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
+++ G+ P ++T ++L+ KR ++L+ ++ +P+++ FN +I+
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200
Query: 80 VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
EA+ + +M GC+P TY T++ G G + +L LL+ M + K ++ + Y
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK-IEADVVIYT 259
Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
++ A C+ ++ +A N+ +M GI+P+ VTYN+L R YG A ++L +M
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
++ PN T ++ + KEG + +A + M + + P++ ++SLI GF D
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
LM P+VVT++T++ + A + + E+F +M + G+ + ++ L +G
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
+AG+ A+ I M GV P+++ ++ ++ G C K+++A+ ++E + + + P+
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
+ TY ++ G +A + +L + KGV+P + + GL EA + +
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 559
Query: 440 SAEEDRQSMPN 450
+ED ++PN
Sbjct: 560 EMKED-GTLPN 569
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 181/344 (52%), Gaps = 3/344 (0%)
Query: 11 HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
++A +F + +G RP ++TY +L+ L R+ L+S + + + P+ + F+A+
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 331
Query: 71 INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
I+A + G + EA K++ +M P TY++LI G+ + +E+ + +LM K+
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS-KD 390
Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
PN TYN L++ +C +EE + +M G+ + VTYNTL + Q G+ A+
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
++ +M ++ V P+ T I++ G CK G +E A+ +++ ++ P++ +N +I+G
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 251 LDI-KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
K DG D +L + GVKP+V+ ++T++ + GL + +F +M + G P+
Sbjct: 511 CKAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
++ L + +R G+ + ++ MR G + + VI+
Sbjct: 570 SGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 152/313 (48%), Gaps = 1/313 (0%)
Query: 4 LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
L G+ +A + + +IE P ++T++ L+ A ++ + L ++ K + PD
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 64 SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
++++IN +DEA +F+ M C P TYNTLIKG+ + EE ++L +
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
MSQ + + N TYN L++ + A + KMV+ G+ PD +TY+ L +Y
Sbjct: 420 EMSQ-RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
G+ +A + +Q +++ P+ T I++ G CK G +ED + V PN++++
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
++I GF + D M+E G P+ T++T++ A G E+ +M
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 598
Query: 304 AGIEPDIHVFSIL 316
G D S++
Sbjct: 599 CGFVGDASTISMV 611
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 237/421 (56%), Gaps = 1/421 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+N +G +A+ ++ +++ G P ++TY +++AAL + + + +++ + K+G+
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
PD + +N++++ SG EA+ +KM+ G +P TY+ L+ G+ E+ K
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
+ M++ + +KP TY L++ + +K ++ E ++ MV +GI PD ++ L AY
Sbjct: 323 IFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
A+ G+ +A + +M+ + PN T G ++ CK G +EDAM + +M + + P
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
+V+NSLI G + ++ + M + G+ + + F++I+D+ G + + +++F+
Sbjct: 442 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 501
Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
MV+ G++P++ ++ L GY AG+ +A +L+ M G+ PN V ++T+I+G+C +
Sbjct: 502 MVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR 561
Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
M+ A+ ++++M G++P++ TY +L G + ++ A+EL + E G + + ST +
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Query: 421 V 421
+
Sbjct: 622 I 622
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 213/460 (46%), Gaps = 4/460 (0%)
Query: 20 LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD---GMKPDSILFNAMINACSE 76
+ E G P + +Y L+ L + R + L L+ + D G PD + + +IN +
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
Query: 77 SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
G+ D+A + +M D G P TYN++I ++++++L M ++ V P+
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN-GVMPDCM 267
Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
TYN ++ +CS +EA + KM + G++PD VTY+ L + G A ++ M
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
++P T G ++ GY +G + + L M +HP+ VF+ LI +
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKV 387
Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
D + M + G+ P+ VT+ ++ +G + F+ M+ G+ P V++ L
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447
Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
G + ++AE ++ M G+ N + F ++I C ++ + ++E M IG+
Sbjct: 448 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGV 507
Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
PN+ TY TL+ GY A + A +LL M G++P T + + + I +A
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567
Query: 437 VLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQI 476
+ K E S I ++ + + + +A+ +++I
Sbjct: 568 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 216/468 (46%), Gaps = 36/468 (7%)
Query: 12 EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
+A + N +++ G P +TY +++ + K + + K+ DG++PD + ++ ++
Sbjct: 249 KAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLM 308
Query: 72 NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
+ ++G EA KIF M G KP +TY TL++GY G E LL LM ++ +
Sbjct: 309 DYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GI 367
Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTY------------------ 173
P+ ++IL+ A+ + +++A V KM G+ P+AVTY
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 174 -----------------NTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYC 216
N+L + RAE+++ EM + + N I+ +C
Sbjct: 428 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487
Query: 217 KEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVV 276
KEG + ++ + M + V PN++ +N+LI G+ D K L+ M G+KP+ V
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547
Query: 277 TFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
T+ST+++ + M +F +M +G+ PDI ++I+ +G + A+ + +
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 337 RKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQP 396
+ G + + ++ G C A+ +++ +C + + +T+ ++ + +
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRN 667
Query: 397 WRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
A++L G+ P T +L+A++ GL E ++ S E++
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDN 715
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 216/468 (46%), Gaps = 40/468 (8%)
Query: 12 EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSI--LSLISKVEKDGMKPDSILFNA 69
+A ++F+ L+ G ++ +A + R ++ + +++ D + PD +
Sbjct: 33 DARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGI 92
Query: 70 MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDK 129
+I C +G +D + G + + L+KG + +++ ++ +
Sbjct: 93 LIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTEL 152
Query: 130 NVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV---ASGIQPDAVTYNTLARAYAQYGET 186
PN +YNIL++ C +N +EA +++ M G PD V+Y T+ + + G++
Sbjct: 153 GCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDS 212
Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
+A EM + + P+ T I++ CK M+ AM L M + V P+ + +NS+
Sbjct: 213 DKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 272
Query: 247 IK------------GFLDIKDSDGVD-----------------------KALTLMEEFGV 271
+ GFL SDGV+ K M + G+
Sbjct: 273 LHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGL 332
Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
KP++ T+ T++ +++ G + + + D MV+ GI PD +VFSIL Y + G+ +A
Sbjct: 333 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAML 392
Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
+ + MR+ G++PN V + VI C + +++ AM +E+M + G++P Y +L+ G
Sbjct: 393 VFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLC 452
Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
+ RAEEL+ M ++G+ + DS G E++++ +
Sbjct: 453 TCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE 500
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 176/357 (49%), Gaps = 4/357 (1%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+ IL G+ +A F +I+EG P I Y +L+ L +++ LI ++ G+
Sbjct: 413 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 472
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
++I FN++I++ + G V E+ K+F+ M G KP TYNTLI GY GK +E++K
Sbjct: 473 CLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMK 532
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
LL M +KPN TY+ L+ +C + +E+A + +M +SG+ PD +TYN + +
Sbjct: 533 LLSGMVS-VGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
Q T A+++ + + + T II+ G CK +DA++ + +++
Sbjct: 592 FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEA 651
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
FN +I L + +D G+ P+ T+ + + GL+ + ++F
Sbjct: 652 RTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLS 711
Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM--RKYGVHPNVV-MFTTVISG 354
M G D + + + + ++ GE +A + L+ + + + + + +F ++SG
Sbjct: 712 MEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG 768
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 171/393 (43%), Gaps = 36/393 (9%)
Query: 7 KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
KG E H + + ++ G P ++ L+ A +Q + + + SK+ + G+ P+++
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVT 408
Query: 67 FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE---------- 116
+ A+I +SG V++AM F++M D G P YN+LI G K E
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468
Query: 117 -------------------------ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
ES KL +LM + VKPN TYN L+ +C +
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR-IGVKPNVITYNTLINGYCLAGKM 527
Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
+EA ++ MV+ G++P+ VTY+TL Y + A + EM+++ V P+ T II
Sbjct: 528 DEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNII 587
Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
+ G + A R+ E L +N ++ G K +D + + +
Sbjct: 588 LQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDL 647
Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
K + TF+ ++DA G + +++F G+ P+ + ++A+ + G ++ +
Sbjct: 648 KLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQ 707
Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
+ SM G + M ++ ++ RA
Sbjct: 708 LFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 134/292 (45%), Gaps = 5/292 (1%)
Query: 7 KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
+G+ E+ +F ++ G +P +ITY TL+ + + L+S + G+KP+++
Sbjct: 489 EGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 548
Query: 67 FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
++ +IN + +++A+ +F++M+ SG P TYN +++G + + K L +
Sbjct: 549 YSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA-KELYVRI 607
Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
+ + TYNI++ C ++A + + ++ +A T+N + A + G
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRN 667
Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
A+ + +N + PN T ++ +G +E+ + M++ + + N +
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFI 727
Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
++ L + L++++E + T S +D S GK QE +
Sbjct: 728 VRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG----GKYQEYY 775
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 225/437 (51%), Gaps = 2/437 (0%)
Query: 8 GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
G EA+ + ++E G P TYT+L+ ++K S + +++ G + + + +
Sbjct: 232 GNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAY 291
Query: 68 NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
+I+ + +DEAM +F KMKD C PT TY LIK + E+L L++ M +
Sbjct: 292 THLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM-E 350
Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
+ +KPN TY +L+ + CS+ E+A ++ +M+ G+ P+ +TYN L Y + G
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410
Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
A ++ M++ ++ PN RT ++ GYCK N+ AM L +M E +V P++V +NSLI
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLI 469
Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
G + D + L+LM + G+ PD T+++++D+ + + + ++FD + + G+
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN 529
Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
P++ +++ L GY +AG+ +A +L M PN + F +I G C K++ A +
Sbjct: 530 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLL 589
Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
EKM +IG+ P + T L+ + A Q M G +P T ++
Sbjct: 590 EEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCR 649
Query: 428 IGLAREAKRVLKSAEED 444
G +A+ ++ E+
Sbjct: 650 EGRLLDAEDMMAKMREN 666
Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 220/410 (53%), Gaps = 8/410 (1%)
Query: 12 EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
EA +F + ++ PT+ TYT L+ +L +R L+L+ ++E+ G+KP+ + +I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 72 NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
++ ++A ++ +M + G P TYN LI GY G E+++ +++LM + + +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM-ESRKL 424
Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
PN RTYN L++ +C K+++ +A V+ KM+ + PD VTYN+L + G A +
Sbjct: 425 SPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
+L M + + P++ T ++ CK +E+A +++ V+PN+V++ +LI G+
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543
Query: 252 DIKDSDGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
+ VD+A ++E+ K P+ +TF+ ++ + G + + + + MVK G++P
Sbjct: 544 ---KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
+ +IL ++ G+ A S M G P+ +TT I +C ++ A +
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660
Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
KM E G++P+L TY +L+ GYG+ Q A ++L+ M + G P + T
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTF 710
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 223/472 (47%), Gaps = 32/472 (6%)
Query: 4 LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
L G + EA + + E G +P + TYT L+ +L Q +F+ L+ ++ + G+ P+
Sbjct: 333 LCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPN 392
Query: 64 SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY--GNVGKPEESLKL 121
I +NA+IN + G +++A+ + + M+ P T TYN LIKGY NV K ++ +
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK---AMGV 449
Query: 122 LQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYA 181
L M + K V P+ TYN L+ C + + A+ ++ M G+ PD TY ++ +
Sbjct: 450 LNKMLERK-VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 182 QYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
+ A + ++ V PN ++ GYCK G +++A L +M PN +
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568
Query: 242 VFNSLIKGFLDIKDSDGVDKALTLMEE----FGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
FN+LI G +DG K TL+EE G++P V T + ++ G
Sbjct: 569 TFNALIHGLC----ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624
Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
F M+ +G +PD H ++ + Y R G AE ++ MR+ GV P++ ++++I G+ +
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLL-------WGYGEAKQPWRAE---------- 400
+ A + ++M + G P+ T+ +L+ +G + +P
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTV 744
Query: 401 -ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNK 451
ELL+ M E V P + + + +G R A++V + + P++
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSE 796
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/471 (25%), Positives = 203/471 (43%), Gaps = 55/471 (11%)
Query: 7 KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
K H+A + N ++E P ++TY +L+ R F S L+S + G+ PD
Sbjct: 440 KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 67 FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
+ +MI++ +S V+EA +F ++ G P Y LI GY GK +E+ +L+ M
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM- 558
Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
KN PN T+N L+ C+ ++EA + KMV G+QP T L + G+
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
A +M ++ +P+ T + YC+EG + DA + +M+E V P+L ++SL
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMD------------------AWSSA 288
IKG+ D+ ++ L M + G +P TF +++ A S+
Sbjct: 679 IKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNM 738
Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM-RKYGVHPNVVM 347
E+ + MV+ + P+ + L G G + AE + M R G+ P+ ++
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV 798
Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWG------------------ 389
F ++S C K A + + M +G P L++ + L+ G
Sbjct: 799 FNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLL 858
Query: 390 ---YGEAKQPWRA--------------EELLQVMEEKGVRPKKSTIQLVAD 423
Y E + W+ EL VME+ G + T L+ +
Sbjct: 859 QCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 197/422 (46%), Gaps = 39/422 (9%)
Query: 32 YTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMK 91
Y TL+ +L R + + ++ +D + P+ +N M+N + GNV+EA + K+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 92 DSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS------------------------- 126
++G P TY +LI GY + + K+ M
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 127 ---------QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
+D P RTY +L+++ C EA N+V +M +GI+P+ TY L
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
+ + +A ++L +M + PN T +++GYCK G +EDA+ + M+ ++
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 238 PNLVVFNSLIKGFL--DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQ 295
PN +N LIKG+ ++ + GV L M E V PDVVT+++++D +G
Sbjct: 426 PNTRTYNELIKGYCKSNVHKAMGV---LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
+ M G+ PD ++ + ++ ++A + S+ + GV+PNVVM+T +I G+
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
C A K+ A + EKM PN T+ L+ G + A L + M + G++P
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 416 ST 417
ST
Sbjct: 603 ST 604
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 184/382 (48%), Gaps = 13/382 (3%)
Query: 70 MINACSESGNVDEAMKIFQKM-KDS----GCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
MI +C G+ + + +KM KD K YNTL+ G +E ++
Sbjct: 149 MIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYME 208
Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
M +DK V PN TYN +V +C ++EEA V K+V +G+ PD TY +L Y Q
Sbjct: 209 MLEDK-VCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
+ A ++ EM R NE ++ G C +++AM +MK+ E P + +
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYT 327
Query: 245 SLIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDM 301
LIK S+ +AL L MEE G+KP++ T++ ++D+ S K +E+ M
Sbjct: 328 VLIKSLCG---SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384
Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
++ G+ P++ ++ L GY + G + A ++ M + PN + +I G+C + +
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NV 443
Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
+AM + KM E + P++ TY +L+ G + A LL +M ++G+ P + T +
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 422 ADSWRAIGLAREAKRVLKSAEE 443
DS EA + S E+
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQ 525
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/435 (20%), Positives = 172/435 (39%), Gaps = 88/435 (20%)
Query: 8 GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
G A+ + + + + G P TYT+++ +L + KR + L +E+ G+ P+ +++
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Query: 68 NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
A+I+ ++G VDEA + +KM C P + T+N LI G GK +E+ L + M +
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595
Query: 128 ----------------------------------DKNVKPNDRTYNILVRAWCSKNSIEE 153
KP+ TY ++ +C + + +
Sbjct: 596 IGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD 655
Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYA-------------------------------- 181
A +++ KM +G+ PD TY++L + Y
Sbjct: 656 AEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK 715
Query: 182 -----QYGETYRAEQMLFEMQN----------------NQVRPNERTCGIIVSGYCKEGN 220
+YG+ +E L M N + V PN ++ ++ G C+ GN
Sbjct: 716 HLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGN 775
Query: 221 MEDAMRFLYRMKELE-VHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS 279
+ A + M+ E + P+ +VFN+L+ +K + K + M G P + +
Sbjct: 776 LRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCK 835
Query: 280 TIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKY 339
++ G + +F ++++ G D + I+ G + G + + M K
Sbjct: 836 VLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKN 895
Query: 340 GVHPNVVMFTTVISG 354
G + ++ +I G
Sbjct: 896 GCKFSSQTYSLLIEG 910
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 148/335 (44%), Gaps = 20/335 (5%)
Query: 4 LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
L GK EA + +++ G +PT+ T T L+ L + F S ++ G KPD
Sbjct: 577 LCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPD 636
Query: 64 SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
+ + I G + +A + KM+++G P TY++LIKGYG++G+ + +L+
Sbjct: 637 AHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLK 696
Query: 124 LMSQDKNVKPNDRTYNILVR---------------AWCSKNSIEEAWNVVY---KMVASG 165
M +D +P+ T+ L++ C+ +++ E VV KMV
Sbjct: 697 RM-RDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHS 755
Query: 166 IQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ-VRPNERTCGIIVSGYCKEGNMEDA 224
+ P+A +Y L + G AE++ MQ N+ + P+E ++S CK +A
Sbjct: 756 VTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEA 815
Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDA 284
+ + M + P L LI G + + + + G D + + I+D
Sbjct: 816 AKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDG 875
Query: 285 WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
GL+ E+F+ M K G + +S+L +G
Sbjct: 876 VGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 216 bits (550), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 217/415 (52%), Gaps = 1/415 (0%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K EA + + +++ G +P L+TY +V L ++ L+L++K+E ++ D ++FN
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
+I++ + +VD+A+ +F++M+ G +P TY++LI + G+ ++ +LL M +
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE- 323
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
K + PN T+N L+ A+ + EA + M+ I PD TYN+L + + +
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
A+QM M + P+ T ++ G+CK +ED M + + V + +LI+
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
G D D K M GV PD++T+S ++D + G + K E+FD M K+ I+
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
DI++++ + +G +AG+ + S+ GV PNVV + T+ISG C+ +Q A ++
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
+KM E G PN TY TL+ + + EL++ M STI LVA+
Sbjct: 564 KKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 218/434 (50%), Gaps = 8/434 (1%)
Query: 20 LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
+++ G+ P+++T ++L+ KR ++L+ ++ + G +PD+I F +I+
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 80 VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
EA+ + +M GC+P TY ++ G G + +L LL M K ++ + +N
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK-IEADVVIFN 264
Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
++ + C +++A N+ +M GI+P+ VTY++L YG A Q+L +M
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
++ PN T ++ + KEG +A + M + + P++ +NSL+ GF D +
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC---MHDRL 381
Query: 260 DKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
DKA + E K PDVVT++T++ + + + E+F +M G+ D ++ L
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
+G G+ A+ + M GV P+++ ++ ++ G CN K+++A+ +++ M + I
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
++ Y T++ G +A + +L + KGV+P T + + L +EA
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 437 VLKSAEEDRQSMPN 450
+LK +ED +PN
Sbjct: 562 LLKKMKED-GPLPN 574
Score = 168 bits (426), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 206/439 (46%), Gaps = 42/439 (9%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K +A +F +++ P+++ + L++A+ + K+F ++SL K+++ + +N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
+IN + A+ + KM G +P+ T ++L+ GY
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGY------------------- 165
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
C I +A +V +MV G +PD +T+ TL + +
Sbjct: 166 -----------------CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
A ++ M +PN T G++V+G CK G+ + A+ L +M+ ++ ++V+FN++I
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 268
Query: 249 GFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
+ VD AL L ME G++P+VVT+S+++ S G ++ DM++
Sbjct: 269 SLCKYRH---VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
I P++ F+ L +V+ G+ +AE + M K + P++ + ++++G+C ++ +A
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
++E M P++ TY TL+ G+ ++K+ EL + M +G+ T +
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 426 RAIGLAREAKRVLKSAEED 444
G A++V K D
Sbjct: 446 FHDGDCDNAQKVFKQMVSD 464
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 147/317 (46%), Gaps = 1/317 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
++ L G+ +A + + +IE+ P L+T+ L+ A ++ +F L + K +
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
PD +N+++N +D+A ++F+ M C P TYNTLIKG+ + E+ +
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
L + MS + + + TY L++ + A V +MV+ G+ PD +TY+ L
Sbjct: 422 LFREMSH-RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
G+ +A ++ MQ ++++ + ++ G CK G ++D + V PN+
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 540
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
V +N++I G + L M+E G P+ T++T++ A G E+ +
Sbjct: 541 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIRE 600
Query: 301 MVKAGIEPDIHVFSILA 317
M D ++A
Sbjct: 601 MRSCRFVGDASTIGLVA 617
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 215 bits (547), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 216/415 (52%), Gaps = 1/415 (0%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K EA + + +++ G +P L+TY T+V L ++ LSL+ K+EK ++ D +++N
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
+I+ + ++D+A+ +F +M + G +P TY++LI N G+ ++ +LL M +
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
K + PN T++ L+ A+ + + EA + +M+ I PD TY++L + +
Sbjct: 323 K-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
A+ M M + PN T ++ G+CK +E+ M M + + N V + +LI
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
GF +D D M GV P+++T++ ++D G + K +F+ + ++ +EP
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
DI+ ++I+ +G +AG+ + + ++ GV PNV+ + T+ISG+C + A S+
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
+KM E G PN TY TL+ + EL++ M G STI LV +
Sbjct: 562 KKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616
Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 211/431 (48%), Gaps = 2/431 (0%)
Query: 20 LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
+++ G+ P ++T ++L+ KR ++L+ ++ + G KPD+ F +I+
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 80 VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
EA+ + +M GC+P TY T++ G G + +L LL+ M + K ++ + YN
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGK-IEADVVIYN 262
Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
++ C +++A N+ +M GI+PD TY++L YG A ++L +M
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
++ PN T ++ + KEG + +A + M + + P++ ++SLI GF D
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
LM P+VVT+ST++ + A + + E+F +M + G+ + ++ L G
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442
Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
+ +A + A+ + M GVHPN++ + ++ G C K+ +AM ++E + + P+
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
+ TY ++ G +A + EL + KGV P + + G EA +LK
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Query: 440 SAEEDRQSMPN 450
+ED +PN
Sbjct: 563 KMKED-GPLPN 572
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 215/427 (50%), Gaps = 6/427 (1%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K +A +F +++ P+++ + L++A+ + +F+ ++SL +++ G+ D ++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
IN + A+ + KM G +P T ++L+ GY + + +++ L+ M +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE- 181
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
KP+ T+ L+ N EA +V +MV G QPD VTY T+ + G+
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
A +L +M+ ++ + I+ G CK +M+DA+ M + P++ ++SLI
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
+ + L+ M E + P+VVTFS ++DA+ G + + ++++D+M+K I+P
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
DI +S L G+ +A+ + M PNVV ++T+I G+C A +++ M ++
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
+M + G+ N TY TL+ G+ +A+ A+ + + M GV P T ++ D
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD----- 476
Query: 429 GLAREAK 435
GL + K
Sbjct: 477 GLCKNGK 483
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 149/309 (48%), Gaps = 1/309 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
++ L G+ +A + + +IE P ++T++ L+ A ++ + L ++ K +
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
PD ++++IN +DEA +F+ M C P TY+TLIKG+ + EE ++
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
L + MSQ + + N TY L+ + + A V +MV+ G+ P+ +TYN L
Sbjct: 420 LFREMSQ-RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
+ G+ +A + +Q + + P+ T I++ G CK G +ED + V PN+
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV 538
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
+ +N++I GF + D L M+E G P+ T++T++ A G E+ +
Sbjct: 539 IAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKE 598
Query: 301 MVKAGIEPD 309
M G D
Sbjct: 599 MRSCGFAGD 607
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 128/300 (42%), Gaps = 36/300 (12%)
Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
+++A ++ MV S P V +N L A A+ + + +MQ + + T I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
++ +C+ + A+ L +M +L G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKL-----------------------------------G 148
Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
+PD+VT S++++ + + + + D MV+ G +PD F+ L G + +A
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
+++ M + G P++V + TV++G C + A+S+ +KM + I ++ Y T++ G
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
+ K A L M+ KG+RP T + G +A R+L E R+ PN
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE-RKINPN 327
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 216/417 (51%), Gaps = 2/417 (0%)
Query: 23 EGHRPTLITYTTLVAALTRQKRFKSIL-SLISKVEKDGMKPDSILFNAMINACSESGNVD 81
G P +++Y ++ A R KR S ++ ++ + + P+ +N +I +GN+D
Sbjct: 163 HGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNID 222
Query: 82 EAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
A+ +F KM+ GC P TYNTLI GY + K ++ KLL+ M+ K ++PN +YN++
Sbjct: 223 VALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMAL-KGLEPNLISYNVV 281
Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
+ C + ++E V+ +M G D VTYNTL + Y + G ++A M EM + +
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341
Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
P+ T ++ CK GNM AM FL +M+ + PN + +L+ GF + +
Sbjct: 342 TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401
Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
L M + G P VVT++ +++ G M + +DM + G+ PD+ +S + G+
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
R+ + +A + M + G+ P+ + ++++I G+C + + A +YE+M +G+ P+
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521
Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
TY L+ Y +A +L M EKGV P T ++ + REAKR+L
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 200/391 (51%), Gaps = 1/391 (0%)
Query: 13 AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
A +F ++E P + TY L+ L+L K+E G P+ + +N +I+
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 73 ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
+ +D+ K+ + M G +P +YN +I G G+ +E +L M++ +
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR-RGYS 307
Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
++ TYN L++ +C + + +A + +M+ G+ P +TY +L + + G RA +
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
L +M+ + PNERT +V G+ ++G M +A R L M + P++V +N+LI G
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
+ L M+E G+ PDVV++ST++ + + + + + +MV+ GI+PD
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
+S L +G+ ++A + M + G+ P+ +T +I+ +C +++A+ ++ +M
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
E G+ P++ TY L+ G + + A+ LL
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/496 (23%), Positives = 233/496 (46%), Gaps = 18/496 (3%)
Query: 16 IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
+F+ + +G P ++TY TL+ + ++ L+ + G++P+ I +N +IN
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 76 ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
G + E + +M G TYNTLIKGY G ++L + M + + P+
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR-HGLTPSV 345
Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
TY L+ + C ++ A + +M G+ P+ TY TL ++Q G A ++L E
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
M +N P+ T +++G+C G MEDA+ L MKE + P++V +++++ GF D
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
D + M E G+KPD +T+S+++ + + +++++M++ G+ PD ++
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI-------- 367
L Y G+ +KA + M + GV P+VV ++ +I+G + + A +
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 368 -------YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
Y + E N K+ +L+ G+ A+++ + M K +P + +
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645
Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVV 480
+ G R+A + K + + V+++H++ ++ NS + + +
Sbjct: 646 MIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHV--LR 703
Query: 481 SSEHNGSSAAKIRSQI 496
S E + + AK+ +I
Sbjct: 704 SCELSEAEQAKVLVEI 719
Score = 171 bits (434), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 220/462 (47%), Gaps = 22/462 (4%)
Query: 23 EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
+G P LI+Y ++ L R+ R K + +++++ + G D + +N +I + GN +
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 83 AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
A+ + +M G P+ TY +LI G +++ L M + + + PN+RTY LV
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM-RVRGLCPNERTYTTLV 387
Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
+ K + EA+ V+ +M +G P VTYN L + G+ A +L +M+ +
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKA 262
P+ + ++SG+C+ ++++A+R M E + P+ + ++SLI+GF + + + +A
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK---EA 504
Query: 263 LTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
L EE G+ PD T++ +++A+ G + K ++ ++MV+ G+ PD+ +S+L G
Sbjct: 505 CDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLING 564
Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS---------------GWCNAVKMQRA 364
+ ++A+ +L + P+ V + T+I G+C M A
Sbjct: 565 LNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEA 624
Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
++E M P+ Y ++ G+ A +A L + M + G T+ + +
Sbjct: 625 DQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKA 684
Query: 425 WRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNL 466
G E V+ + ++ ++ VE HR+ N+
Sbjct: 685 LHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNM 726
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 190/389 (48%), Gaps = 14/389 (3%)
Query: 36 VAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGC 95
VAA T + S++ + D S +F+ ++ + S +D+A+ I + G
Sbjct: 106 VAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGF 165
Query: 96 KPTTSTYNTL----IKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI 151
P +YN + I+ N+ E K + L SQ V PN TYNIL+R +C +I
Sbjct: 166 MPGVLSYNAVLDATIRSKRNISFAENVFKEM-LESQ---VSPNVFTYNILIRGFCFAGNI 221
Query: 152 EEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGII 211
+ A + KM G P+ VTYNTL Y + + ++L M + PN + ++
Sbjct: 222 DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 281
Query: 212 VSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF-- 269
++G C+EG M++ L M + V +N+LIKG+ +AL + E
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYC---KEGNFHQALVMHAEMLR 338
Query: 270 -GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
G+ P V+T+++++ + AG M + E D M G+ P+ ++ L G+ + G +
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
A +L M G P+VV + +I+G C KM+ A+++ E M E G++P++ +Y T+L
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKST 417
G+ + A + + M EKG++P T
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 187/351 (53%), Gaps = 20/351 (5%)
Query: 7 KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
+G H+A + ++ G P++ITYT+L+ ++ + + + ++ G+ P+
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 67 FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
+ +++ S+ G ++EA ++ ++M D+G P+ TYN LI G+ GK E+++ +L+ M
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM- 441
Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
++K + P+ +Y+ ++ +C ++EA V +MV GI+PD +TY++L + + + T
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
A + EM + P+E T +++ YC EG++E A++ M E V P++V ++ L
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVK--PDVVTFSTIMDAWSS---------------AG 289
I G K S + L++ F + P VT+ T+++ S+ G
Sbjct: 562 INGL--NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG 619
Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
+M + ++F+ M+ +PD ++I+ G+ RAG+ +KA ++ M K G
Sbjct: 620 MMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 158/307 (51%), Gaps = 1/307 (0%)
Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR-AEQMLFEM 196
++++V+++ + I++A ++V+ A G P ++YN + A + AE + EM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
+QV PN T I++ G+C GN++ A+ +M+ PN+V +N+LI G+ ++
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
D K L M G++P++++++ +++ G M + + +M + G D ++ L
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
KGY + G +A + M ++G+ P+V+ +T++I C A M RAM ++M G+
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
PN +TY TL+ G+ + A +L+ M + G P T + + G +A
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 437 VLKSAEE 443
VL+ +E
Sbjct: 437 VLEDMKE 443
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 110/269 (40%), Gaps = 49/269 (18%)
Query: 20 LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
++E+G +P ITY++L+ Q+R K L ++ + G+ PD + A+INA G+
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 80 VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ---------------- 123
+++A+++ +M + G P TY+ LI G + E+ +LL
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT 595
Query: 124 ------------------------LMSQ---------DKNVKPNDRTYNILVRAWCSKNS 150
+M++ KN KP+ YNI++ C
Sbjct: 596 LIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGD 655
Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
I +A+ + +MV SG VT L +A + G+ ++ + + +
Sbjct: 656 IRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKV 715
Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
+V +EGNM+ + L M + PN
Sbjct: 716 LVEINHREGNMDVVLDVLAEMAKDGFLPN 744
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 216/415 (52%), Gaps = 1/415 (0%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K EA + + +++ G +P L+TY +V L ++ +L++K+E ++ D ++FN
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
+I++ + +VD+A+ +F++M+ G +P TY++LI + G+ ++ +LL M +
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE- 248
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
K + PN T+N L+ A+ + EA + M+ I PD TYN+L + + +
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
A+QM M + P+ T ++ G+CK +ED M + + V + +LI+
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
G D D K M GV PD++T+S ++D + G + K E+FD M K+ I+
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
DI++++ + +G +AG+ + S+ GV PNVV + T+ISG C+ +Q A ++
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488
Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
+KM E G P+ TY TL+ + + EL++ M STI LVA+
Sbjct: 489 KKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 543
Score = 185 bits (470), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 213/428 (49%), Gaps = 7/428 (1%)
Query: 20 LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
+++ G+ P+++T ++L+ KR ++L+ ++ + G +PD+I F +I+
Sbjct: 71 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130
Query: 80 VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
EA+ + +M GC+P TY ++ G G + + LL M K ++ + +N
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK-IEADVVIFN 189
Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
++ + C +++A N+ +M GI+P+ VTY++L YG A Q+L +M
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
++ PN T ++ + KEG +A + M + + P++ +NSLI GF D +
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC---MHDRL 306
Query: 260 DKALTLMEEFGVK---PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
DKA + E K PD+ T++T++ + + + E+F +M G+ D ++ L
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGI 376
+G G+ A+ + M GV P+++ ++ ++ G CN K+++A+ +++ M + I
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKR 436
++ Y T++ G +A + +L + KGV+P T + + L +EA
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 437 VLKSAEED 444
+LK +ED
Sbjct: 487 LLKKMKED 494
Score = 172 bits (436), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 199/421 (47%), Gaps = 42/421 (9%)
Query: 27 PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
P++ + L++A+ + K+F ++SL K+++ G+ + +N +IN + A+ +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 87 FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
KM G +P+ T ++L+ GY C
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGY------------------------------------C 91
Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
I +A +V +MV G +PD +T+ TL + + A ++ M +PN
Sbjct: 92 HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 151
Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL- 265
T G++V+G CK G+++ A L +M+ ++ ++V+FN++I + VD AL L
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH---VDDALNLF 208
Query: 266 --MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
ME G++P+VVT+S+++ S G ++ DM++ I P++ F+ L +V+
Sbjct: 209 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268
Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
G+ +AE + M K + P++ + ++I+G+C ++ +A ++E M P+L TY
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 328
Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
TL+ G+ ++K+ EL + M +G+ T + G A++V K
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 388
Query: 444 D 444
D
Sbjct: 389 D 389
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 143/301 (47%), Gaps = 1/301 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
++ L G+ +A + + +IE+ P L+T+ L+ A ++ +F L + K +
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
PD +N++IN +D+A ++F+ M C P TYNTLIKG+ + E+ +
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
L + MS + + + TY L++ + A V +MV+ G+ PD +TY+ L
Sbjct: 347 LFREMSH-RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
G+ +A ++ MQ ++++ + ++ G CK G ++D + V PN+
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 465
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
V +N++I G + L M+E G PD T++T++ A G E+ +
Sbjct: 466 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 525
Query: 301 M 301
M
Sbjct: 526 M 526
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 1/221 (0%)
Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG 289
+M+ L + NL +N LI F L M + G +P +VT S++++ +
Sbjct: 35 KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 94
Query: 290 LMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFT 349
+ + D MV+ G PD F+ L G + +A +++ M + G PN+V +
Sbjct: 95 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 154
Query: 350 TVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEK 409
V++G C + A ++ KM I ++ + T++ + + A L + ME K
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
G+RP T + + G +A ++L E + + PN
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN-PN 254
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 98/233 (42%), Gaps = 21/233 (9%)
Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
MVK+ P I F+ L + + S+ M++ G+ N+ + +I+ +C +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
+ A+++ KM ++G P++ T +LL GY K+ A L+ M E G RP T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 421 VADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDE-IAVESIHRKQNLSASNSTFLQIPGV 479
+ A EA ++ + R PN + V + ++ ++ + +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGDIDLAFNLL------ 173
Query: 480 VSSEHNGSSAAKIRSQIVLRSDTVWTATK--------SLFVNTYGSGVQPMVV 524
N AAKI + +V+ + + + K +LF G++P VV
Sbjct: 174 -----NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 221
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 222/441 (50%), Gaps = 38/441 (8%)
Query: 30 ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQK 89
+TY LVAA R K +I + K G+ P++I + +I+A ++G DEA+K+F
Sbjct: 352 VTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYS 411
Query: 90 MKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKN 149
MK++GC P T TYN ++ G + E +K+L M + PN T+N ++ A C
Sbjct: 412 MKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM-KSNGCSPNRATWNTML-ALCGNK 469
Query: 150 SIEEAWNVVYK-MVASGIQPDAVTYNTLARAYAQ----------YGETYRA--------- 189
+++ N V++ M + G +PD T+NTL AY + YGE RA
Sbjct: 470 GMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTY 529
Query: 190 ----------------EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
E ++ +M++ +P E + +++ Y K GN R R+KE
Sbjct: 530 NALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKE 589
Query: 234 LEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
++ P+ ++ +L+ + G ++A TL ++ G KPD+V F++++ ++ + +
Sbjct: 590 GQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQ 649
Query: 294 CQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
+ I + + + G+ PD+ ++ L YVR GE KAE IL ++ K + P++V + TVI
Sbjct: 650 AEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIK 709
Query: 354 GWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
G+C MQ A+ + +M E GI P + TY T + GY E++++ M + RP
Sbjct: 710 GFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRP 769
Query: 414 KKSTIQLVADSWRAIGLAREA 434
+ T ++V D + G EA
Sbjct: 770 NELTFKMVVDGYCRAGKYSEA 790
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 208/439 (47%), Gaps = 4/439 (0%)
Query: 8 GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDGMKPDSIL 66
GK +A +F + E G PTL+TY ++ + R ++ IL ++ ++ G+K D
Sbjct: 224 GKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFT 283
Query: 67 FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
+ +++AC+ G + EA + F ++K G +P T TYN L++ +G G E+L +L+ M
Sbjct: 284 CSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEM- 342
Query: 127 QDKNVKPNDR-TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
++N P D TYN LV A+ +EA V+ M G+ P+A+TY T+ AY + G+
Sbjct: 343 -EENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGK 401
Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
A ++ + M+ PN T ++S K+ + ++ L MK PN +N+
Sbjct: 402 EDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNT 461
Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
++ + V++ M+ G +PD TF+T++ A+ G +++ +M +AG
Sbjct: 462 MLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAG 521
Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
+ ++ L R G+ + E++++ M+ G P ++ ++ +
Sbjct: 522 FNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIE 581
Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
I ++ E I P+ TLL + + +E + ++ G +P + +
Sbjct: 582 RIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIF 641
Query: 426 RAIGLAREAKRVLKSAEED 444
+ +A+ +L+S ED
Sbjct: 642 TRNNMYDQAEGILESIRED 660
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 178/399 (44%), Gaps = 36/399 (9%)
Query: 8 GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
GK EA +F + E G P TY +++ L ++ R ++ ++ ++ +G P+ +
Sbjct: 400 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATW 459
Query: 68 NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
N M+ C G ++F++MK G +P T+NTLI YG G ++ K+ M++
Sbjct: 460 NTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTR 519
Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
TYN L+ A K NV+ M + G +P +Y+ + + YA+ G
Sbjct: 520 -AGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYL 578
Query: 188 RAEQMLFEMQNNQVRPN--------------------ERTCGI---------------IV 212
E++ ++ Q+ P+ ER + ++
Sbjct: 579 GIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSML 638
Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
S + + + A L ++E + P+LV +NSL+ ++ + ++ L +E+ +K
Sbjct: 639 SIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLK 698
Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
PD+V+++T++ + GLM + + +M + GI P I ++ GY G + E +
Sbjct: 699 PDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDV 758
Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
+ M K PN + F V+ G+C A K AM K+
Sbjct: 759 IECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 183/409 (44%), Gaps = 8/409 (1%)
Query: 35 LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
V L R+ ++ L+ K+ D + +++A S +G ++A+ +F++MK+ G
Sbjct: 181 FVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMG 240
Query: 95 CKPTTSTYNTLIKGYGNVGKP-EESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
PT TYN ++ +G +G+ + L +L M + K +K ++ T + ++ A + + E
Sbjct: 241 PSPTLVTYNVILDVFGKMGRSWRKILGVLDEM-RSKGLKFDEFTCSTVLSACAREGLLRE 299
Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
A ++ + G +P VTYN L + + + G A +L EM+ N + T +V+
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359
Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
Y + G ++A + M + V PN + + ++I + D K M+E G P
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP 419
Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
+ T++ ++ + ++ DM G P+ ++ + G + +
Sbjct: 420 NTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVF 479
Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
M+ G P+ F T+IS + A +Y +M G N + TY LL
Sbjct: 480 REMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR- 538
Query: 394 KQPWRA-EELLQVMEEKGVRPKKST----IQLVADSWRAIGLAREAKRV 437
K WR+ E ++ M+ KG +P +++ +Q A +G+ R R+
Sbjct: 539 KGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRI 587
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 21 IEEGH-RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
I+EG P+ + TL+ A + + + +K G KPD ++FN+M++ + +
Sbjct: 587 IKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNM 646
Query: 80 VDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQDKNVKPNDR 136
D+A I + +++ G P TYN+L+ Y G K EE LK L+ +KP+
Sbjct: 647 YDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE----KSQLKPDLV 702
Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
+YN +++ +C + ++EA ++ +M GI+P TYNT Y G E ++ M
Sbjct: 703 SYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECM 762
Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELE 235
N RPNE T ++V GYC+ G +AM F+ ++K +
Sbjct: 763 AKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFD 801
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
++ D V I + R + A +L + +V +TT++ + K ++
Sbjct: 169 GALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEK 228
Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE---KGVRPKKSTIQL 420
A+ ++E+M E+G +P L TY +L +G+ + WR ++L V++E KG++ + T
Sbjct: 229 AIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWR--KILGVLDEMRSKGLKFDEFTCST 286
Query: 421 VADSWRAIGLAREAKRVL 438
V + GL REAK
Sbjct: 287 VLSACAREGLLREAKEFF 304
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%)
Query: 7 KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
+G EA + + + E G RP + TY T V+ T F I +I + K+ +P+ +
Sbjct: 714 RGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELT 773
Query: 67 FNAMINACSESGNVDEAMKIFQKMK 91
F +++ +G EAM K+K
Sbjct: 774 FKMVVDGYCRAGKYSEAMDFVSKIK 798
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 209 bits (531), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 223/444 (50%), Gaps = 1/444 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+N L + + A I +++ G+ P+++T +L+ R ++L+ ++ + G
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
+PD++ F +++ + EA+ + ++M GC+P TY +I G G+P+ +L
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
LL M + K ++ + Y+ ++ + C +++A N+ +M GI+PD TY++L
Sbjct: 227 LLNKMEKGK-IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
YG A ++L +M ++ PN T ++ + KEG + +A + M + + PN+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
V +NSLI GF D + TLM PDVVT++T+++ + A + E+F D
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
M + G+ + ++ L G+ +A + A+ + M GVHPN++ + T++ G C K
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
+++AM ++E + + + P++ TY + G +A + +L + KGV+P
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525
Query: 421 VADSWRAIGLAREAKRVLKSAEED 444
+ + GL EA + +ED
Sbjct: 526 MISGFCKKGLKEEAYTLFIKMKED 549
Score = 205 bits (522), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 218/420 (51%), Gaps = 1/420 (0%)
Query: 4 LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
L K EA + ++ +G +P L+TY ++ L ++ L+L++K+EK ++ D
Sbjct: 180 LFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD 239
Query: 64 SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
++++ +I++ + +VD+A+ +F +M + G +P TY++LI N G+ ++ +LL
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
M + K + PN T+N L+ A+ + + EA + +M+ I P+ VTYN+L + +
Sbjct: 300 DMLERK-INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
A+Q+ M + P+ T +++G+CK + D M M + N V +
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
+LI GF D D M GV P+++T++T++D G + K +F+ + K
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
+ +EPDI+ ++I+++G +AG+ + + S+ GV P+V+ + T+ISG+C +
Sbjct: 479 SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEE 538
Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
A +++ KM E G P+ TY TL+ + + EL++ M ST LV D
Sbjct: 539 AYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 598
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 212/427 (49%), Gaps = 6/427 (1%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K EA +F +++ P+++ ++ L++A+ + K+F ++S K+E G+ + +N
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
MIN + A+ I KM G P+ T N+L+ G+ + + E++ L+ M +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE- 163
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
+P+ T+ LV N EA +V +MV G QPD VTY + + GE
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
A +L +M+ ++ + ++ CK +++DA+ M + P++ ++SLI
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
+ + L+ M E + P+VVTF++++DA++ G + + +++FD+M++ I+P
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
+I ++ L G+ +A+ I T M P+VV + T+I+G+C A K+ M ++
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
M G+ N TY TL+ G+ +A A+ + + M GV P T + D
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD----- 458
Query: 429 GLAREAK 435
GL + K
Sbjct: 459 GLCKNGK 465
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 218/420 (51%), Gaps = 1/420 (0%)
Query: 4 LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
L + EA + + ++ +G +P L+TY +V L ++ LSL+ K+E+ ++P
Sbjct: 196 LFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255
Query: 64 SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
+++N +I+A NV++A+ +F +M + G +P TYN+LI+ N G+ ++ +LL
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
M + K + PN T++ L+ A+ + + EA + +M+ I PD TY++L + +
Sbjct: 316 DMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
A+ M M + PN T ++ G+CK +++ M M + + N V +
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
+LI GF ++ D M GV PD++T+S ++D + G + +F+ + +
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
+ +EPDI+ ++I+ +G +AG+ + + S+ GV PNVV +TT++SG+C +
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554
Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
A +++ +M E G P+ TY TL+ + + EL++ M STI LV +
Sbjct: 555 ADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTN 614
Score = 202 bits (514), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 201/398 (50%), Gaps = 1/398 (0%)
Query: 20 LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
++E G++P T+ TL+ L R R ++L+ ++ G +PD + + ++N + G+
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 80 VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
+D A+ + +KM+ +P YNT+I N ++L L M +K ++PN TYN
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM-DNKGIRPNVVTYN 295
Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
L+R C+ +A ++ M+ I P+ VT++ L A+ + G+ AE++ EM
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
+ P+ T +++G+C +++A M + PN+V +N+LIKGF K D
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
+ M + G+ + VT++T++ + A Q +F MV G+ PDI +SIL G
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
G+ + A + +++ + P++ + +I G C A K++ ++ + G+ PN
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
+ TY T++ G+ A+ L + M+E+G P T
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 213/425 (50%), Gaps = 1/425 (0%)
Query: 20 LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
+++ G+ P ++T +L+ R +SL+ ++ + G +PDS FN +I+
Sbjct: 142 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNR 201
Query: 80 VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
EA+ + +M GC+P TY ++ G G + +L LL+ M Q K ++P YN
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK-IEPGVVIYN 260
Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
++ A C+ ++ +A N+ +M GI+P+ VTYN+L R YG A ++L +M
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 320
Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
++ PN T ++ + KEG + +A + M + + P++ ++SLI GF D
Sbjct: 321 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 380
Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
LM P+VVT++T++ + A + + E+F +M + G+ + ++ L G
Sbjct: 381 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHG 440
Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
+ +A E A+ + M GV P+++ ++ ++ G CN K++ A+ ++E + + P+
Sbjct: 441 FFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPD 500
Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
+ TY ++ G +A + +L + KGV+P T + + GL EA + +
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFR 560
Query: 440 SAEED 444
+E+
Sbjct: 561 EMKEE 565
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 210/415 (50%), Gaps = 1/415 (0%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K +A +F +++ P+++ ++ L++A+ + +F ++SL +++ G+ + ++
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
+IN + A+ + KM G +P T N+L+ G+ + + +++ L+ M +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE- 179
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
+P+ T+N L+ N EA +V +MV G QPD VTY + + G+
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
A +L +M+ ++ P I+ C N+ DA+ M + PN+V +NSLI+
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
+ + L+ M E + P+VVTFS ++DA+ G + + ++++D+M+K I+P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
DI +S L G+ +A+ + M PNVV + T+I G+C A ++ M ++
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
+M + G+ N TY TL+ G+ +A++ A+ + + M GV P T ++ D
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 122/257 (47%), Gaps = 3/257 (1%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
++ V +GK EA +++ +I+ P + TY++L+ R + +
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 392
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
P+ + +N +I ++ VDE M++F++M G T TY TLI G+ + + +
Sbjct: 393 FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQI 452
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
+ + M D V P+ TY+IL+ C+ +E A V + S ++PD TYN +
Sbjct: 453 VFKQMVSD-GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
+ G+ + + V+PN T ++SG+C++G E+A MKE P+
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDS 571
Query: 241 VVFNSLIKGFLDIKDSD 257
+N+LI+ L +D D
Sbjct: 572 GTYNTLIRAHL--RDGD 586
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 124/300 (41%), Gaps = 36/300 (12%)
Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
+++A N+ MV S P V ++ L A A+ + + +MQN + N T I
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
+++ +C+ + A+ L +M +L G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKL-----------------------------------G 146
Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
+PD+VT +++++ + + + MV+ G +PD F+ L G R +A
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
+++ M G P++V + V++G C + A+S+ +KM + I P + Y T++
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
K A L M+ KG+RP T + G +A R+L E R+ PN
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE-RKINPN 325
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 205 bits (522), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 222/433 (51%), Gaps = 3/433 (0%)
Query: 7 KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
KG EA + N + +G P + TY T++ L + +++ + +++ + G+ PDS
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 67 FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
+ +++ + G+V E K+F M+ P +++++ + G +++L +
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV- 401
Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
++ + P++ Y IL++ +C K I A N+ +M+ G D VTYNT+ +
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
A+++ EM + P+ T I++ G+CK GN+++AM +MKE + ++V +N+L
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
+ GF + D D + M + P +++S +++A S G + + ++D+M+ I
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
+P + + + + KGY R+G ES L M G P+ + + T+I G+ M +A
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641
Query: 367 IYEKMCEI--GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
+ +KM E G+ P++ TY ++L G+ Q AE +L+ M E+GV P +ST + +
Sbjct: 642 LVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701
Query: 425 WRAIGLAREAKRV 437
+ + EA R+
Sbjct: 702 FVSQDNLTEAFRI 714
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 189/408 (46%), Gaps = 7/408 (1%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K EAH F L +G ++ L+ +L R + + ++ + G+ + N
Sbjct: 180 KLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLN 239
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
M+NA + G +++ ++++ G P TYNTLI Y + G EE+ +L+ M
Sbjct: 240 IMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMP-G 298
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
K P TYN ++ C E A V +M+ SG+ PD+ TY +L + G+
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE 358
Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
E++ +M++ V P+ ++S + + GN++ A+ + +KE + P+ V++ LI+
Sbjct: 359 TEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQ 418
Query: 249 GFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
G+ + A+ L E G DVVT++TI+ ++G+ ++F++M +
Sbjct: 419 GYC---RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
+ PD + +IL G+ + G Q A + M++ + +VV + T++ G+ + A
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
I+ M I P +Y L+ A + M K ++P
Sbjct: 536 EIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 188/377 (49%), Gaps = 3/377 (0%)
Query: 7 KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
KG E +F+ + P L+ ++++++ TR L + V++ G+ PD+++
Sbjct: 353 KGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412
Query: 67 FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
+ +I G + AM + +M GC TYNT++ G E+ KL M+
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
+ + + P+ T IL+ C +++ A + KM I+ D VTYNTL + + G+
Sbjct: 473 E-RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
A+++ +M + ++ P + I+V+ C +G++ +A R M + P +++ NS+
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV--KA 304
IKG+ ++ + L M G PD ++++T++ + M K + M +
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG 651
Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
G+ PD+ ++ + G+ R + ++AE +L M + GV+P+ +T +I+G+ + + A
Sbjct: 652 GLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEA 711
Query: 365 MSIYEKMCEIGINPNLK 381
I+++M + G +P+ K
Sbjct: 712 FRIHDEMLQRGFSPDDK 728
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 187/373 (50%), Gaps = 7/373 (1%)
Query: 68 NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
NA+I + G V+ A ++Q++ SG T N ++ GK E+ L + Q
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQV-Q 262
Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
+K V P+ TYN L+ A+ SK +EEA+ ++ M G P TYNT+ ++G+
Sbjct: 263 EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
RA+++ EM + + P+ T ++ CK+G++ + + M+ +V P+LV F+S++
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 248 KGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
F S +DKAL ++E G+ PD V ++ ++ + G++ + ++M++
Sbjct: 383 SLF---TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ 439
Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
G D+ ++ + G + +A+ + M + + P+ T +I G C +Q A
Sbjct: 440 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNA 499
Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
M +++KM E I ++ TY TLL G+G+ A+E+ M K + P + ++ ++
Sbjct: 500 MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Query: 425 WRAIGLAREAKRV 437
+ G EA RV
Sbjct: 560 LCSKGHLAEAFRV 572
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 179/403 (44%), Gaps = 18/403 (4%)
Query: 60 MKPDSILFNAMINACSESGNVDEAMKIFQKM-KDSG----------------CKPTTSTY 102
K S+ +AMI+ SG + +A +M + SG C S +
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVF 168
Query: 103 NTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV 162
+ LI+ Y K E+ + L+ + K + N L+ + +E AW V ++
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLL-RSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 163 ASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNME 222
SG+ + T N + A + G+ + L ++Q V P+ T ++S Y +G ME
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 223 DAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIM 282
+A + M P + +N++I G + + M G+ PD T+ +++
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 283 DAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVH 342
G + + +++F DM + PD+ FS + + R+G KA S+++ G+
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 343 PNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
P+ V++T +I G+C + AM++ +M + G ++ TY T+L G + K A++L
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 403 LQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
M E+ + P T+ ++ D +G + A + + +E R
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR 510
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 217/431 (50%), Gaps = 4/431 (0%)
Query: 8 GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
GK +A I L G P +ITY +++ + + LS++ ++ + PD + +
Sbjct: 151 GKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTY 207
Query: 68 NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
N ++ + +SG + +AM++ +M C P TY LI+ ++KLL M +
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM-R 266
Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
D+ P+ TYN+LV C + ++EA + M +SG QP+ +T+N + R+ G
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
AE++L +M P+ T I+++ C++G + A+ L +M + PN + +N L+
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
GF K D + L M G PD+VT++T++ A G + EI + + G
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
P + ++ + G +AG+ KA +L MR + P+ + +++++ G K+ A+
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
+ + +GI PN T+ +++ G +++Q RA + L M +G +P +++ ++ +
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAY 566
Query: 428 IGLAREAKRVL 438
G+A+EA +L
Sbjct: 567 EGMAKEALELL 577
Score = 202 bits (515), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 195/397 (49%), Gaps = 3/397 (0%)
Query: 27 PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
P ++TY T++ +L + K + ++ ++ + PD I + +I A V AMK+
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 87 FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
+M+D GC P TYN L+ G G+ +E++K L M +PN T+NI++R+ C
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS-SGCQPNVITHNIILRSMC 320
Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
S +A ++ M+ G P VT+N L + G RA +L +M + +PN
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL-DIKDSDGVDKALTL 265
+ ++ G+CKE M+ A+ +L RM +P++V +N+++ D K D V+ L
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE-ILNQ 439
Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
+ G P ++T++T++D + AG GK ++ D+M ++PD +S L G R G+
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
+A + G+ PN V F +++ G C + + RA+ M G PN +Y
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
L+ G A ELL + KG+ K S Q+
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQVAG 596
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 161/306 (52%), Gaps = 1/306 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+N + +G+ EA N + G +P +IT+ ++ ++ R+ L++ + + G
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
P + FN +IN G + A+ I +KM GC+P + +YN L+ G+ K + +++
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
L+ M + P+ TYN ++ A C +E+A ++ ++ + G P +TYNT+
Sbjct: 401 YLERMVS-RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
A+ G+T +A ++L EM+ ++P+ T +V G +EG +++A++F + + + + PN
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
V FNS++ G + +D L M G KP+ +++ +++ + G+ + E+ ++
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 579
Query: 301 MVKAGI 306
+ G+
Sbjct: 580 LCNKGL 585
Score = 139 bits (349), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 172/387 (44%), Gaps = 48/387 (12%)
Query: 89 KMKDSGCKPTTSTYNTLIKGYGNV-GKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCS 147
K++ SG + TL GY N G S S + + D N +R
Sbjct: 62 KVESSGLNGRAQKFETLSSGYSNSNGNGHYS-------SVNSSFALEDVESNNHLRQMVR 114
Query: 148 KNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERT 207
+EE + + MV G PD + TL R + + G+T +A ++L ++ + P+ T
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174
Query: 208 CGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD--------------- 252
+++SGYCK G + +A+ L RM V P++V +N++++ D
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 253 ------------------IKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLM 291
+DS GV A+ L++E G PDVVT++ +++ G +
Sbjct: 232 QRDCYPDVITYTILIEATCRDS-GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
+ + +DM +G +P++ +I+ + G AE +L M + G P+VV F +
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
I+ C + RA+ I EKM + G PN +Y LL G+ + K+ RA E L+ M +G
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVL 438
P T + + G +A +L
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEIL 437
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 3/281 (1%)
Query: 159 YKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
Y V S + V N R + GE + L M + P+ C ++ G+C+
Sbjct: 91 YSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRL 150
Query: 219 GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTF 278
G A + L ++ P+++ +N +I G+ + ++ AL++++ V PDVVT+
Sbjct: 151 GKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGE---INNALSVLDRMSVSPDVVTY 207
Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
+TI+ + +G + + E+ D M++ PD+ ++IL + R A +L MR
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD 267
Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
G P+VV + +++G C ++ A+ M G PN+ T+ +L +
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 399 AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
AE+LL M KG P T ++ + GL A +L+
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 216/420 (51%), Gaps = 1/420 (0%)
Query: 4 LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
L +GK EA + + ++E G +P ++TY ++V + R L L+ K+E+ +K D
Sbjct: 168 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227
Query: 64 SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
++ +I++ G +D A+ +F++M+ G K + TYN+L++G GK + LL+
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 287
Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
M + + PN T+N+L+ + + ++EA + +M+ GI P+ +TYNTL Y
Sbjct: 288 DMVS-REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346
Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
A ML M N+ P+ T ++ GYC ++D M+ + + + N V +
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 406
Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
+ L++GF ++ M GV PDV+T+ ++D G + K EIF+D+ K
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
+ ++ I +++ + +G + G+ + A ++ S+ GV PNV+ +T +ISG C +
Sbjct: 467 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526
Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
A + KM E G PN TY TL+ + + +L++ M+ G S+I++V D
Sbjct: 527 ANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 213/426 (50%), Gaps = 2/426 (0%)
Query: 13 AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
A+ + +++ G+ P T+ TL+ L + + + L+ ++ ++G +PD + +N+++N
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 73 ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
SG+ A+ + +KM++ K TY+T+I G + ++ L + M + K +K
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETKGIK 260
Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
+ TYN LVR C + ++ MV+ I P+ +T+N L + + G+ A ++
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320
Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
EM + PN T ++ GYC + + +A L M + P++V F SLIKG+
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380
Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
+K D K + + G+ + VT+S ++ + +G + +E+F +MV G+ PD+
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
+ IL G G+ +KA I ++K + +VM+TT+I G C K++ A +++ +
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ-LVADSWRAIGLA 431
G+ PN+ TY ++ G + A LL+ MEE G P T L+ R L
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560
Query: 432 REAKRV 437
AK +
Sbjct: 561 ASAKLI 566
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/496 (24%), Positives = 238/496 (47%), Gaps = 36/496 (7%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSIL------------------- 49
K +A +F +I P+L+ ++ +A+ R K+F +L
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 50 ----------------SLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS 93
S++ KV K G +PD+ FN +I G V EA+ + +M ++
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 94 GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
GC+P TYN+++ G G +L LL+ M +++NVK + TY+ ++ + C I+
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKM-EERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
A ++ +M GI+ VTYN+L R + G+ +L +M + ++ PN T +++
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
+ KEG +++A M + PN++ +N+L+ G+ + L LM P
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
D+VTF++++ + + ++F ++ K G+ + +SIL +G+ ++G+ + AE +
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
M +GV P+V+ + ++ G C+ K+++A+ I+E + + ++ + Y T++ G +
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKD 453
+ A L + KGV+P T ++ G EA +L+ EED + +
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 454 EIAVESIHRKQNLSAS 469
+ + R +L+AS
Sbjct: 547 NTLIRAHLRDGDLTAS 562
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 142/302 (47%), Gaps = 5/302 (1%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+++ V +GK EA+ ++ +I G P +ITY TL+ Q R +++ + ++
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
PD + F ++I VD+ MK+F+ + G TY+ L++G+ GK + + +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
L Q M V P+ TY IL+ C +E+A + + S + V Y T+
Sbjct: 425 LFQEMVS-HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
+ G+ A + + V+PN T +++SG CK+G++ +A L +M+E PN
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
+N+LI+ L D K + M+ G D + ++D L G+ + F D
Sbjct: 544 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML----LSGELDKSFLD 599
Query: 301 MV 302
M+
Sbjct: 600 ML 601
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/469 (26%), Positives = 229/469 (48%), Gaps = 1/469 (0%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K +A +F + RP LI ++ L + + R K++ +L L ++E G+ + +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
MIN C + A K+ G +P T T++TLI G G+ E+L+L+ M +
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
+ KP T N LV C + +A ++ +MV +G QP+ VTY + + + G+T
Sbjct: 172 GH-KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
A ++L +M+ +++ + II+ G CK+G++++A M+ +++++ +LI+
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
GF D K L M + + PDVV FS ++D + G + + +E+ +M++ GI P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
D ++ L G+ + + KA +L M G PN+ F +I+G+C A + + ++
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
KM G+ + TY TL+ G+ E + A+EL Q M + VRP + +++ D
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 429 GLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIP 477
G +A + + E+ + + I + + + + F +P
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 217/423 (51%), Gaps = 1/423 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+N L GK +A + + ++E G +P +TY ++ + + + + L+ K+E+ +
Sbjct: 184 VNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKI 243
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
K D++ ++ +I+ + G++D A +F +M+ G K Y TLI+G+ G+ ++ K
Sbjct: 244 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAK 303
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
LL+ M + K + P+ ++ L+ + + + EA + +M+ GI PD VTY +L +
Sbjct: 304 LLRDMIKRK-ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
+ + +A ML M + PN RT I+++GYCK ++D + +M V +
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
V +N+LI+GF ++ + + M V+PD+V++ ++D G K EIF+
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
+ K+ +E DI +++I+ G A + A + S+ GV P+V + +I G C
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542
Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
+ A ++ KM E G +PN TY L+ + ++ +L++ ++ G ST+++
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKM 602
Query: 421 VAD 423
V D
Sbjct: 603 VVD 605
Score = 192 bits (488), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 213/446 (47%), Gaps = 14/446 (3%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+N L +G+ EA + + ++E GH+PTLIT LV L + + LI ++ + G
Sbjct: 149 INGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGF 208
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
+P+ + + ++ +SG AM++ +KM++ K Y+ +I G G + +
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN 268
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
L M + K K + Y L+R +C ++ ++ M+ I PD V ++ L +
Sbjct: 269 LFNEM-EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
+ G+ AE++ EM + P+ T ++ G+CKE ++ A L M PN+
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
FN LI G+ ++ +D L L + GV D VT++T++ + G + +E+
Sbjct: 388 RTFNILINGYC---KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
F +MV + PDI + IL G GEP+KA I + K + ++ ++ +I G CN
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504
Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
A K+ A ++ + G+ P++KTY ++ G + A+ L + MEE G P T
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564
Query: 418 IQLV-------ADSWRAIGLAREAKR 436
++ D+ ++ L E KR
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKR 590
Score = 125 bits (314), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 146/302 (48%), Gaps = 5/302 (1%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
++ V +GK EA + +I+ G P +TYT+L+ ++ + ++ + G
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
P+ FN +IN ++ +D+ +++F+KM G T TYNTLI+G+ +GK E + +
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
L Q M + V+P+ +Y IL+ C E+A + K+ S ++ D YN +
Sbjct: 444 LFQEMVS-RRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
+ A + + V+P+ +T I++ G CK+G++ +A +M+E PN
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
+N LI+ L D+ K + ++ G D T ++D S G+ ++ F D
Sbjct: 563 CTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSD----GRLKKSFLD 618
Query: 301 MV 302
M+
Sbjct: 619 ML 620
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 202 bits (513), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 124/489 (25%), Positives = 231/489 (47%), Gaps = 34/489 (6%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
+P EA + N ++ G P+++TY +L++A R + L +++ + G KPD +
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK-------- 120
+++ +G V+ AM IF++M+++GCKP T+N IK YGN GK E +K
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC 448
Query: 121 -----------LLQLMSQD----------KNVK-----PNDRTYNILVRAWCSKNSIEEA 154
LL + Q+ K +K P T+N L+ A+ S E+A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
V +M+ +G+ PD TYNT+ A A+ G ++E++L EM++ + +PNE T ++
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
Y + + + P V+ +L+ ++A + ++E G PD
Sbjct: 569 YANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPD 628
Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
+ T ++++ + ++ K + D M + G P + ++ L + R+ + K+E IL
Sbjct: 629 ITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILR 688
Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
+ G+ P+++ + TVI +C +M+ A I+ +M GI P++ TY T + Y
Sbjct: 689 EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADS 748
Query: 395 QPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDE 454
A +++ M + G RP ++T + D + + EAK ++ P +D
Sbjct: 749 MFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKGEDL 808
Query: 455 IAVESIHRK 463
+E I +K
Sbjct: 809 RLLERIVKK 817
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 203/387 (52%), Gaps = 8/387 (2%)
Query: 35 LVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSG 94
+++ L ++ R S ++ + +++DG D + ++I+A + SG EA+ +F+KM++ G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 95 CKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSI-EE 153
CKPT TYN ++ +G +G P + L + + P+ TYN L+ C + S+ +E
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSLHQE 297
Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
A V +M A+G D VTYN L Y + A ++L EM N P+ T ++S
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---G 270
Y ++G +++AM +M E P++ + +L+ GF + + V+ A+++ EE G
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF---ERAGKVESAMSIFEEMRNAG 414
Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
KP++ TF+ + + + G + +IFD++ G+ PDI ++ L + + G +
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
+ M++ G P F T+IS + ++AM++Y +M + G+ P+L TY T+L
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAAL 534
Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKST 417
++E++L ME+ +P + T
Sbjct: 535 ARGGMWEQSEKVLAEMEDGRCKPNELT 561
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 229/472 (48%), Gaps = 4/472 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+++L +G+ A +FN L E+G + +YT+L++A R++ +++ K+E+DG
Sbjct: 180 ISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGC 239
Query: 61 KPDSILFNAMINACSESGNV-DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESL 119
KP I +N ++N + G ++ + +KMK G P TYNTLI +E+
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAA 299
Query: 120 KLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
++ + M + + TYN L+ + + +EA V+ +MV +G P VTYN+L A
Sbjct: 300 QVFEEM-KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 180 YAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
YA+ G A ++ +M +P+ T ++SG+ + G +E AM M+ PN
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
+ FN+ IK + + + K + G+ PD+VT++T++ + G+ + +F
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478
Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
+M +AG P+ F+ L Y R G ++A ++ M GV P++ + TV++
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538
Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQ 419
+++ + +M + PN TY +LL Y K+ L + + + P+ ++
Sbjct: 539 MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLK 598
Query: 420 LVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIH-RKQNLSASN 470
+ L EA+R +E R P+ ++ SI+ R+Q ++ +N
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKE-RGFSPDITTLNSMVSIYGRRQMVAKAN 649
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 211/433 (48%), Gaps = 2/433 (0%)
Query: 7 KGKPH-EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
+G H EA +F + G +TY L+ + R K + +++++ +G P +
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350
Query: 66 LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
+N++I+A + G +DEAM++ +M + G KP TY TL+ G+ GK E ++ + + M
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
++ KPN T+N ++ + ++ E + ++ G+ PD VT+NTL + Q G
Sbjct: 411 -RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM 469
Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
+ EM+ P T ++S Y + G+ E AM RM + V P+L +N+
Sbjct: 470 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 529
Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
++ + +K L ME+ KP+ +T+ +++ A+++ +G + +++
Sbjct: 530 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 589
Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
IEP + L + +AE + +++ G P++ +++S + + +A
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKAN 649
Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
+ + M E G P++ TY +L++ + + ++EE+L+ + KG++P + V ++
Sbjct: 650 GVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAY 709
Query: 426 RAIGLAREAKRVL 438
R+A R+
Sbjct: 710 CRNTRMRDASRIF 722
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 180/406 (44%), Gaps = 58/406 (14%)
Query: 39 LTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPT 98
+QK ++S+L D+ + +I+ + G V A +F +++ G
Sbjct: 161 FMKQKDYQSML-------------DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLD 207
Query: 99 TSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWN-- 156
+Y +LI + N G+ E++ + + M +D KP TYN+++ + + WN
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEED-GCKPTLITYNVILNVF---GKMGTPWNKI 263
Query: 157 --VVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
+V KM + GI PDA TYNTL TC
Sbjct: 264 TSLVEKMKSDGIAPDAYTYNTLI-----------------------------TC------ 288
Query: 215 YCKEGNM-EDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
CK G++ ++A + MK + V +N+L+ + K L M G P
Sbjct: 289 -CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSP 347
Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
+VT+++++ A++ G++ + E+ + M + G +PD+ ++ L G+ RAG+ + A SI
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIF 407
Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
MR G PN+ F I + N K M I++++ G++P++ T+ TLL +G+
Sbjct: 408 EEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQN 467
Query: 394 KQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
+ + M+ G P++ T + ++ G +A V +
Sbjct: 468 GMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 229/469 (48%), Gaps = 1/469 (0%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K +A +F +I PT+I ++ L +A+ + K++ +L+L ++E G+ + +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
MIN + A K+ G +P T T++TLI G G+ E+L+L+ M +
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
+ KP+ T N LV C EA ++ KMV G QP+AVTY + + G+T
Sbjct: 188 GH-KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
A ++L +M+ ++ + II+ G CK G++++A M+ + N++ +N LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
GF + D K L M + + P+VVTFS ++D++ G + + +E+ +M+ GI P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
D ++ L G+ + KA ++ M G PN+ F +I+G+C A ++ + ++
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
KM G+ + TY TL+ G+ E + A+EL Q M + V P T +++ D
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 429 GLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIP 477
G + +A + + E+ + + I + + + + F +P
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 535
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 217/423 (51%), Gaps = 1/423 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+N L GK EA + + ++E G +P +TY ++ + + + + L+ K+E+ +
Sbjct: 200 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
K D++ ++ +I+ + G++D A +F +M+ G TYN LI G+ N G+ ++ K
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
LL+ M + K + PN T+++L+ ++ + + EA + +M+ GI PD +TY +L +
Sbjct: 320 LLRDMIKRK-INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
+ +A QM+ M + PN RT I+++GYCK ++D + +M V +
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
V +N+LI+GF ++ + + M V P++VT+ ++D G K EIF+
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
+ K+ +E DI +++I+ G A + A + S+ GV P V + +I G C
Sbjct: 499 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 558
Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
+ A ++ KM E G P+ TY L+ + ++ +L++ ++ G STI++
Sbjct: 559 LSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKM 618
Query: 421 VAD 423
V D
Sbjct: 619 VID 621
Score = 195 bits (496), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 221/446 (49%), Gaps = 14/446 (3%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+N L +G+ EA + + ++E GH+P LIT TLV L + + LI K+ + G
Sbjct: 165 INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGC 224
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
+P+++ + ++N +SG AM++ +KM++ K Y+ +I G G + +
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 284
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
L M K + N TYNIL+ +C+ ++ ++ M+ I P+ VT++ L ++
Sbjct: 285 LFNEMEM-KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
+ G+ AE++ EM + + P+ T ++ G+CKE +++ A + + M PN+
Sbjct: 344 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 403
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
FN LI G+ ++ +D L L + GV D VT++T++ + G + +E+
Sbjct: 404 RTFNILINGYC---KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
F +MV + P+I + IL G GE +KA I + K + ++ ++ +I G CN
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520
Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
A K+ A ++ + G+ P +KTY ++ G + AE L + MEE G P T
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 580
Query: 418 IQLV-------ADSWRAIGLAREAKR 436
++ D+ +++ L E KR
Sbjct: 581 YNILIRAHLGDGDATKSVKLIEELKR 606
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 211/428 (49%), Gaps = 1/428 (0%)
Query: 20 LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
+I+ G+ P IT++TL+ L + R L L+ ++ + G KPD I N ++N SG
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 208
Query: 80 VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
EAM + KM + GC+P TY ++ G+ +++LL+ M +++N+K + Y+
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKYS 267
Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
I++ C S++ A+N+ +M GI + +TYN L + G ++L +M
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
++ PN T +++ + KEG + +A M + P+ + + SLI GF D
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
++ + LM G P++ TF+ +++ + A + E+F M G+ D ++ L +G
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
+ G+ A+ + M V PN+V + ++ G C+ + ++A+ I+EK+ + + +
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
+ Y ++ G A + A +L + KGV+P T ++ G EA+ + +
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 567
Query: 440 SAEEDRQS 447
EED +
Sbjct: 568 KMEEDGHA 575
Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 141/302 (46%), Gaps = 11/302 (3%)
Query: 4 LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
V +GK EA + +I G P ITYT+L+ ++ ++ + G P+
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402
Query: 64 SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
FN +IN ++ +D+ +++F+KM G T TYNTLI+G+ +GK + +L Q
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
M K V PN TY IL+ C E+A + K+ S ++ D YN +
Sbjct: 463 EMVSRK-VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 521
Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
+ A + + V+P +T I++ G CK+G + +A +M+E P+ +
Sbjct: 522 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 581
Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
N LI+ L D D K++ L+EE G D T ++D S G+ ++ F D
Sbjct: 582 NILIRAHLG--DGDAT-KSVKLIEELKRCGFSVDASTIKMVIDMLSD----GRLKKSFLD 634
Query: 301 MV 302
M+
Sbjct: 635 ML 636
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 3/246 (1%)
Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIF 298
NL L G +DIK D +D ++ + P V+ FS + A + +
Sbjct: 53 NLSYRERLRSGLVDIKADDAIDLFRDMIHSRPL-PTVIDFSRLFSAIAKTKQYDLVLALC 111
Query: 299 DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNA 358
M GI +++ SI+ + R + A S + + K G PN + F+T+I+G C
Sbjct: 112 KQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLE 171
Query: 359 VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
++ A+ + ++M E+G P+L T TL+ G + + A L+ M E G +P T
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 231
Query: 419 QLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF--LQI 476
V + G A +L+ EE + K I ++ + + +L + + F +++
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 291
Query: 477 PGVVSS 482
G+ ++
Sbjct: 292 KGITTN 297
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 212/423 (50%), Gaps = 1/423 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+N L KG+ EA + + ++E G +P +TY ++ L + L L K+E+ +
Sbjct: 182 INGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNI 241
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
K + ++ +I++ + G+ D+A+ +F +M+ G K TY++LI G N GK ++ K
Sbjct: 242 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK 301
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
+L+ M +N+ P+ T++ L+ + + + EA + +M+ GI PD +TYN+L +
Sbjct: 302 MLREMIG-RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 360
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
+ + A QM M + P+ T I+++ YCK ++D MR + + PN
Sbjct: 361 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
+ +N+L+ GF + + M GV P VVT+ ++D G + K EIF+
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
M K+ + I +++I+ G A + A S+ S+ GV P+VV + +I G C
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
+ A ++ KM E G P+ TY L+ + + EL++ M+ G STI++
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKM 600
Query: 421 VAD 423
V D
Sbjct: 601 VID 603
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 219/440 (49%), Gaps = 1/440 (0%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K ++A +F +I+ PT I + L +A+ R K++ +L +E +G++ D
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
MIN + A + + G +P T T++TL+ G+ G+ E++ L+ M +
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
K +P+ T + L+ C K + EA ++ +MV G QPD VTY + + G +
Sbjct: 170 KQ-RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
A + +M+ ++ + I++ CK+G+ +DA+ M+ + ++V ++SLI
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
G + D K L M + PDVVTFS ++D + G + + +E++++M+ GI P
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
D ++ L G+ + +A + M G P++V ++ +I+ +C A ++ M ++
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
++ G+ PN TY TL+ G+ ++ + A+EL Q M +GV P T ++ D
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Query: 429 GLAREAKRVLKSAEEDRQSM 448
G +A + + ++ R ++
Sbjct: 469 GELNKALEIFEKMQKSRMTL 488
Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 209/418 (50%), Gaps = 7/418 (1%)
Query: 7 KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
+G+ EA + + ++E RP L+T +TL+ L + R L LI ++ + G +PD +
Sbjct: 153 EGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVT 212
Query: 67 FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
+ ++N +SGN A+ +F+KM++ K + Y+ +I G +++L L M
Sbjct: 213 YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME 272
Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
K +K + TY+ L+ C+ ++ ++ +M+ I PD VT++ L + + G+
Sbjct: 273 M-KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331
Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
A+++ EM + P+ T ++ G+CKE + +A + M P++V ++ L
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Query: 247 IKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
I + K VD + L E G+ P+ +T++T++ + +G + +E+F +MV
Sbjct: 392 INSYCKAKR---VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
G+ P + + IL G GE KA I M+K + + ++ +I G CNA K+
Sbjct: 449 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD 508
Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
A S++ + + G+ P++ TY ++ G + A+ L + M+E G P T ++
Sbjct: 509 AWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNIL 566
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 205/421 (48%), Gaps = 1/421 (0%)
Query: 24 GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
G+ P IT++TLV + R ++L+ ++ + +PD + + +IN G V EA
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 84 MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
+ + +M + G +P TY ++ G +L L + M +++N+K + Y+I++
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM-EERNIKASVVQYSIVID 253
Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
+ C S ++A ++ +M GI+ D VTY++L G+ +ML EM + P
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
+ T ++ + KEG + +A M + P+ + +NSLI GF ++
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
LM G +PD+VT+S +++++ A + +F ++ G+ P+ ++ L G+ ++
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
G+ A+ + M GV P+VV + ++ G C+ ++ +A+ I+EKM + + + Y
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493
Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
++ G A + A L + +KGV+P T ++ G EA + + +E
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Query: 444 D 444
D
Sbjct: 554 D 554
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 108/232 (46%), Gaps = 9/232 (3%)
Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAG----LMGKCQEIFDDM 301
L G +DIK +D +D ++++ + P + F+ + A + ++G C+ M
Sbjct: 42 LRNGIVDIKVNDAIDLFESMIQSRPL-PTPIDFNRLCSAVARTKQYDLVLGFCK----GM 96
Query: 302 VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKM 361
GIE D++ +I+ Y R + A S+L K G P+ + F+T+++G+C ++
Sbjct: 97 ELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRV 156
Query: 362 QRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
A+++ ++M E+ P+L T TL+ G + A L+ M E G +P + T V
Sbjct: 157 SEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPV 216
Query: 422 ADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSASNSTF 473
+ G + A + + EE + I ++S+ + + + S F
Sbjct: 217 LNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF 268
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 199 bits (505), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 213/415 (51%), Gaps = 4/415 (0%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K EA + + +++ G +P L+TY T+V L ++ L+L++K+E +K + ++FN
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFN 262
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
+I++ + +V+ A+ +F +M+ G +P TYN+LI N G+ ++ +LL M +
Sbjct: 263 TIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE- 321
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
K + PN T+N L+ A+ + + EA + +M+ I PD +TYN L + +
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
A+QM M + PN +T +++G+CK +ED + M + + N V + ++I+
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
GF D D M V D++T+S ++ S G + IF + K+ +E
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
+I +++ + +G +AG+ +A + S+ + P+VV + T+ISG C+ +Q A ++
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLF 558
Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
KM E G PN TY TL+ + EL++ M G STI LV +
Sbjct: 559 RKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTN 613
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 200/399 (50%), Gaps = 6/399 (1%)
Query: 20 LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
++E G++P T+TTL+ L + ++L+ ++ + G +PD + + ++N + G+
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 80 VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
+D A+ + KM+ + K +NT+I E ++ L M + K ++PN TYN
Sbjct: 239 IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM-ETKGIRPNVVTYN 297
Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
L+ C+ +A ++ M+ I P+ VT+N L A+ + G+ AE++ EM
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD-SDG 258
+ P+ T ++++G+C +++A + M + PN+ +N+LI GF K DG
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
V+ M + G+ + VT++TI+ + AG Q +F MV + DI +SIL
Sbjct: 418 VE-LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
G G+ A I ++K + N+ ++ T+I G C A K+ A ++ C + I P
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF---CSLSIKP 533
Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
++ TY T++ G + A++L + M+E G P T
Sbjct: 534 DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGT 572
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 187/384 (48%), Gaps = 4/384 (1%)
Query: 24 GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
G L TY+ + R+ + L++++K+ K G +PD + ++++N S + +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 84 MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
+ + +M + G KP T T+ TLI G K E++ L+ M Q + +P+ TY +V
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ-RGCQPDLVTYGTVVN 231
Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
C + I+ A N++ KM A+ I+ + V +NT+ + +Y A + EM+ +RP
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
N T +++ C G DA R L M E +++PN+V FN+LI F +K
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
M + + PD +T++ +++ + + + +++F MV P+I ++ L G+ +
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
+ + M + G+ N V +TT+I G+ A A ++++M + ++ TY
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTY 471
Query: 384 ETLLWG---YGEAKQPWRAEELLQ 404
LL G YG+ + LQ
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYLQ 495
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 203/437 (46%), Gaps = 36/437 (8%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K +A +F +++ P+++ + L++A+ + +F+ ++SL +++ G+ D ++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
IN + A+ + KM G +P T ++L+ GY + + +++ L+ M +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE- 181
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
KP+ T+ L+ N EA +V +MV G QPD VTY
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY--------------- 226
Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
G +V+G CK G+++ A+ L +M+ + N+V+FN++I
Sbjct: 227 --------------------GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID 266
Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
+ + T ME G++P+VVT++++++ + G + +M++ I P
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP 326
Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
++ F+ L + + G+ +AE + M + + P+ + + +I+G+C ++ A ++
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
+ M PN++TY TL+ G+ + K+ EL + M ++G+ T + +
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Query: 429 GLAREAKRVLKSAEEDR 445
G A+ V K +R
Sbjct: 447 GDCDSAQMVFKQMVSNR 463
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 159/340 (46%), Gaps = 39/340 (11%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+N L G+ +A + + ++E+ P ++T+ L+ A ++ + L ++ + +
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
PD+I +N +IN +DEA ++F+ M C P TYNTLI G+ + E+ ++
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
L + MSQ G+ + VTY T+ + +
Sbjct: 420 LFREMSQ------------------------------------RGLVGNTVTYTTIIQGF 443
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
Q G+ A+ + +M +N+V + T I++ G C G ++ A+ +++ E+ N+
Sbjct: 444 FQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNI 503
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
++N++I+G + + V +A L +KPDVVT++T++ S L+ + ++F
Sbjct: 504 FIYNTMIEG---MCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRK 560
Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
M + G P+ ++ L + +R + + ++ MR G
Sbjct: 561 MKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSG 600
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 213/431 (49%), Gaps = 2/431 (0%)
Query: 20 LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
+++ G+ P ++T ++L+ KR ++L+ ++ G +P+++ FN +I+
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 80 VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
EAM + +M GC+P TY ++ G G + + LL M Q K ++P YN
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK-LEPGVLIYN 260
Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
++ C +++A N+ +M GI+P+ VTY++L YG A ++L +M
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
++ P+ T ++ + KEG + +A + M + + P++V ++SLI GF D
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
+ M PDVVT++T++ + + + E+F +M + G+ + ++IL +G
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
+AG+ A+ I M GV PN++ + T++ G C K+++AM ++E + + P
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
+ TY ++ G +A + +L + KGV+P + + G EA + K
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 440 SAEEDRQSMPN 450
+ED ++PN
Sbjct: 561 EMKED-GTLPN 570
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 217/415 (52%), Gaps = 1/415 (0%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K EA + + ++ +G +P L+TY +V L ++ +L++K+E+ ++P +++N
Sbjct: 201 KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 260
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
+I+ + ++D+A+ +F++M+ G +P TY++LI N G+ ++ +LL M +
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
K + P+ T++ L+ A+ + + EA + +MV I P VTY++L + +
Sbjct: 321 K-INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
A+QM M + P+ T ++ G+CK +E+ M M + + N V +N LI+
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
G D D + M GV P+++T++T++D G + K +F+ + ++ +EP
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
I+ ++I+ +G +AG+ + + ++ GV P+VV + T+ISG+C + A +++
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
++M E G PN Y TL+ + EL++ M G STI LV +
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 212/427 (49%), Gaps = 6/427 (1%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K +A +F +++ P++I ++ L++A+ + +F ++SL +++ G+ + ++
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
+IN + A+ + KM G +P T ++L+ GY + + E++ L+ M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV- 179
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
+PN T+N L+ N EA ++ +MVA G QPD VTY + + G+T
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
A +L +M+ ++ P I+ G CK +M+DA+ M+ + PN+V ++SLI
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
+ + L+ M E + PDV TFS ++DA+ G + + ++++D+MVK I+P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
I +S L G+ +A+ + M P+VV + T+I G+C +++ M ++
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
+M + G+ N TY L+ G +A A+E+ + M GV P T + D
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD----- 474
Query: 429 GLAREAK 435
GL + K
Sbjct: 475 GLCKNGK 481
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 198/402 (49%), Gaps = 1/402 (0%)
Query: 12 EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
EA + + + G++P +T+ TL+ L + ++LI ++ G +PD + + ++
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 228
Query: 72 NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
N + G+ D A + KM+ +P YNT+I G +++L L + M + K +
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM-ETKGI 287
Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
+PN TY+ L+ C+ +A ++ M+ I PD T++ L A+ + G+ AE+
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
+ EM + P+ T +++G+C +++A + M P++V +N+LIKGF
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407
Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
K + + M + G+ + VT++ ++ AG QEIF +MV G+ P+I
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
++ L G + G+ +KA + +++ + P + + +I G C A K++ ++ +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527
Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
G+ P++ Y T++ G+ A+ L + M+E G P
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 150/309 (48%), Gaps = 1/309 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
++ L G+ +A + + +IE P + T++ L+ A ++ + L ++ K +
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
P + ++++IN +DEA ++F+ M C P TYNTLIKG+ + EE ++
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
+ + MSQ + + N TYNIL++ + A + +MV+ G+ P+ +TYNTL
Sbjct: 418 VFREMSQ-RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
+ G+ +A + +Q +++ P T I++ G CK G +ED + V P++
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
V +N++I GF + D M+E G P+ ++T++ A G E+ +
Sbjct: 537 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 596
Query: 301 MVKAGIEPD 309
M G D
Sbjct: 597 MRSCGFAGD 605
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%)
Query: 218 EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVT 277
E ++DA+ M + P+++ F+ L+ + D V M+ G+ + T
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 278 FSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMR 337
+S +++ + + + M+K G EP+I S L GY + +A +++ M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 338 KYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPW 397
G PN V F T+I G K AM++ ++M G P+L TY ++ G +
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 398 RAEELLQVMEEKGVRP 413
A LL ME+ + P
Sbjct: 239 LAFNLLNKMEQGKLEP 254
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 5/191 (2%)
Query: 259 VDKALTLMEEFGVK----PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
+D A+ L E VK P ++ FS ++ A + + + M GI + + +S
Sbjct: 62 LDDAVALFGEM-VKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
IL + R + A ++L M K G PN+V +++++G+C++ ++ A+++ ++M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
G PN T+ TL+ G + A L+ M KG +P T +V + G A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 435 KRVLKSAEEDR 445
+L E+ +
Sbjct: 241 FNLLNKMEQGK 251
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 195 bits (495), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 230/472 (48%), Gaps = 38/472 (8%)
Query: 8 GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
G+ EA ++E G PTLITY+ LV LTR KR ++ ++ K G P+ I++
Sbjct: 322 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 381
Query: 68 NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-QLMS 126
N +I++ E+G++++A++I M G T+STYNTLIKGY G+ + + +LL +++S
Sbjct: 382 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 441
Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
NV N ++ ++ CS + A V +M+ + P TL ++G+
Sbjct: 442 IGFNV--NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 499
Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
+A ++ F+ N + RT ++ G C+ G +++A R + + V +N+L
Sbjct: 500 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 559
Query: 247 IKG------------FLD--------------------IKDSDGVDKALTLMEEF---GV 271
I G FLD + + + V++A+ ++ G+
Sbjct: 560 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 619
Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
PDV T+S ++D A + QE FD+M+ ++P+ V++ L + Y R+G A
Sbjct: 620 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 679
Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
+ M+ G+ PN +T++I G +++ A ++E+M G+ PN+ Y L+ GYG
Sbjct: 680 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYG 739
Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
+ Q + E LL+ M K V P K T ++ + G EA R+L E
Sbjct: 740 KLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 791
Score = 162 bits (409), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 211/452 (46%), Gaps = 36/452 (7%)
Query: 23 EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
+G P + +TT + A + + + + L SK+E+ G+ P+ + FN +I+ G DE
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 326
Query: 83 AMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILV 142
A +KM + G +PT TY+ L+KG + ++ +L+ M++ K PN YN L+
Sbjct: 327 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK-KGFPPNVIVYNNLI 385
Query: 143 RAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVR 202
++ S+ +A + MV+ G+ + TYNTL + Y + G+ AE++L EM +
Sbjct: 386 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 445
Query: 203 PNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI--------------- 247
N+ + ++ C + A+RF+ M + P + +LI
Sbjct: 446 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 505
Query: 248 ------KGF-LDIKDSD----GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC-- 294
KGF +D + S+ G+ +A L E F ++ +++ +MD S L+ C
Sbjct: 506 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 565
Query: 295 ----QEIF---DDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVM 347
E F D+MVK G++PD + +SIL G + ++A ++ G+ P+V
Sbjct: 566 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 625
Query: 348 FTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
++ +I G C A + + +++M + PN Y L+ Y + + A EL + M+
Sbjct: 626 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 685
Query: 408 EKGVRPKKSTIQLVADSWRAIGLAREAKRVLK 439
KG+ P +T + I EAK + +
Sbjct: 686 HKGISPNSATYTSLIKGMSIISRVEEAKLLFE 717
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 182/386 (47%), Gaps = 7/386 (1%)
Query: 8 GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
G+ A + ++ G ++T+++ L F S L + ++ M P L
Sbjct: 427 GQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLL 486
Query: 68 NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
+I+ + G +A++++ + + G T T N L+ G GK +E+ ++ Q
Sbjct: 487 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI-QKEIL 545
Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
+ + +YN L+ C K ++EA+ + +MV G++PD TY+ L +
Sbjct: 546 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 605
Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
A Q + + N + P+ T +++ G CK E+ F M V PN VV+N LI
Sbjct: 606 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 665
Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
+ + S + AL L E+ G+ P+ T+++++ S + + + +F++M
Sbjct: 666 RAYCR---SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME 722
Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
G+EP++ ++ L GY + G+ K E +L M VHPN + +T +I G+ + A
Sbjct: 723 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 782
Query: 365 MSIYEKMCEIGINPNLKTYETLLWGY 390
+ +M E GI P+ TY+ ++GY
Sbjct: 783 SRLLNEMREKGIVPDSITYKEFIYGY 808
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 126/246 (51%), Gaps = 1/246 (0%)
Query: 6 GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSI 65
GK K EA + +++ G +P TY+ L+ L + + + +++GM PD
Sbjct: 565 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 624
Query: 66 LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
++ MI+ C ++ +E + F +M +P T YN LI+ Y G+ +L+L + M
Sbjct: 625 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 684
Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
+ K + PN TY L++ + +EEA + +M G++P+ Y L Y + G+
Sbjct: 685 -KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 743
Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
+ E +L EM + V PN+ T +++ GY ++GN+ +A R L M+E + P+ + +
Sbjct: 744 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 803
Query: 246 LIKGFL 251
I G+L
Sbjct: 804 FIYGYL 809
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 174/410 (42%), Gaps = 45/410 (10%)
Query: 16 IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
+F L +G P+ T L+ +L R F+ V K G+ PD LF INA
Sbjct: 226 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFC 284
Query: 76 ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
+ G V+EA+K+F KM+++G P T+NT+I G G G+ +E+ + M + + ++P
Sbjct: 285 KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE-RGMEPTL 343
Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
TY+ILV+ I +A+ V+ +M G P+ + YN L ++ + G +A ++
Sbjct: 344 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI--- 400
Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV----FNSLIKGFL 251
K+L V L + +N+LIKG+
Sbjct: 401 ------------------------------------KDLMVSKGLSLTSSTYNTLIKGYC 424
Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
+D ++ L M G + +F++++ S + +M+ + P
Sbjct: 425 KNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG 484
Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
+ + L G + G+ KA + G + ++ G C A K+ A I +++
Sbjct: 485 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 544
Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
G + +Y TL+ G K+ A L M ++G++P T ++
Sbjct: 545 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 594
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 145/321 (45%), Gaps = 1/321 (0%)
Query: 4 LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
L GK +A ++ + +G T L+ L + + ++ G D
Sbjct: 493 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 552
Query: 64 SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
+ +N +I+ C +DEA +M G KP TY+ LI G N+ K EE+++
Sbjct: 553 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 612
Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
++ + P+ TY++++ C EE +M++ +QP+ V YN L RAY +
Sbjct: 613 DCKRN-GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 671
Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
G A ++ +M++ + PN T ++ G +E+A M+ + PN+ +
Sbjct: 672 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 731
Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
+LI G+ + V+ L M V P+ +T++ ++ ++ G + + + ++M +
Sbjct: 732 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 791
Query: 304 AGIEPDIHVFSILAKGYVRAG 324
GI PD + GY++ G
Sbjct: 792 KGIVPDSITYKEFIYGYLKQG 812
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 141/315 (44%), Gaps = 7/315 (2%)
Query: 128 DKNVKPNDRTYNILVRAWCSKNSIE---EAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
+K + P+ T NIL+ + N + EA++VV K G+ PD + T A+ + G
Sbjct: 232 NKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK----GVSPDVYLFTTAINAFCKGG 287
Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
+ A ++ +M+ V PN T ++ G G ++A F +M E + P L+ ++
Sbjct: 288 KVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYS 347
Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
L+KG K L M + G P+V+ ++ ++D++ AG + K EI D MV
Sbjct: 348 ILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK 407
Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
G+ ++ L KGY + G+ AE +L M G + N FT+VI C+ + A
Sbjct: 408 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 467
Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
+ +M ++P TL+ G + + +A EL KG T +
Sbjct: 468 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 527
Query: 425 WRAIGLAREAKRVLK 439
G EA R+ K
Sbjct: 528 LCEAGKLDEAFRIQK 542
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 103/203 (50%), Gaps = 1/203 (0%)
Query: 24 GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
G P + TY+ ++ + +R + ++ ++P+++++N +I A SG + A
Sbjct: 618 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 677
Query: 84 MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
+++ + MK G P ++TY +LIKG + + EE+ L + M + ++PN Y L+
Sbjct: 678 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALID 736
Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
+ + + ++ +M + + P+ +TY + YA+ G A ++L EM+ + P
Sbjct: 737 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 796
Query: 204 NERTCGIIVSGYCKEGNMEDAMR 226
+ T + GY K+G + +A +
Sbjct: 797 DSITYKEFIYGYLKQGGVLEAFK 819
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 232/478 (48%), Gaps = 6/478 (1%)
Query: 3 ILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
++ +G +A +F+ +I G P Y +L+ R+K + L+ +++K +
Sbjct: 356 VMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415
Query: 63 DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
+ ++ SG++D A I ++M SGC+P Y TLIK + + +++++L
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475
Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
+ M +++ + P+ YN L+ ++EA + + +MV +G++P+A TY Y +
Sbjct: 476 KEM-KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534
Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
E A++ + EM+ V PN+ C +++ YCK+G + +A M + + +
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
+ L+ G D ++ M G+ PDV ++ +++ +S G M K IFD+MV
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
+ G+ P++ ++++L G+ R+GE +KA+ +L M G+HPN V + T+I G+C + +
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
A ++++M G+ P+ Y TL+ G RA + +KG + +
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPFNALI 773
Query: 423 DSWRAIG---LAREAKRVLKSAEEDRQSMPNKKD-EIAVESIHRKQNLSASNSTFLQI 476
+ G L E L DR PN I ++ + ++ NL A+ F Q+
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 202/408 (49%), Gaps = 1/408 (0%)
Query: 31 TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
TY+ L+ L + + + L+ ++ G+ +++ I S+ G +++A +F M
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM 373
Query: 91 KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
SG P Y +LI+GY + +LL M + +N+ + TY +V+ CS
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK-RNIVISPYTYGTVVKGMCSSGD 432
Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
++ A+N+V +M+ASG +P+ V Y TL + + Q A ++L EM+ + P+
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
++ G K M++A FL M E + PN + + I G+++ + DK + M E G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
V P+ V + +++ + G + + + MV GI D +++L G + + AE
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
I MR G+ P+V + +I+G+ MQ+A SI+++M E G+ PN+ Y LL G+
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
+ + +A+ELL M KG+ P T + D + G EA R+
Sbjct: 673 CRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 190/394 (48%), Gaps = 6/394 (1%)
Query: 59 GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
G+ P ++ +I+ + +++A + +M G TY+ LI G G+ ++
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK-GRNADA 330
Query: 119 LKLL--QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
K L +++S N+KP Y+ + + +E+A + M+ASG+ P A Y +L
Sbjct: 331 AKGLVHEMVSHGINIKP--YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388
Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
Y + + ++L EM+ + + T G +V G C G+++ A + M
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448
Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
PN+V++ +LIK FL + L M+E G+ PD+ +++++ S A M + +
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 297 IFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWC 356
+MV+ G++P+ + GY+ A E A+ + MR+ GV PN V+ T +I+ +C
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 357 NAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKS 416
K+ A S Y M + GI + KTY L+ G + + AEE+ + M KG+ P
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 417 TIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
+ ++ + + +G ++A + E+ + PN
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLT-PN 661
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 212/474 (44%), Gaps = 56/474 (11%)
Query: 2 NILVGKGKP---HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD 58
++++G K EA ++E G +P TY ++ F S + ++ +
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551
Query: 59 GMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEES 118
G+ P+ +L +IN + G V EA ++ M D G TY L+ G K +++
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Query: 119 LKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLAR 178
++ + M + K + P+ +Y +L+ + ++++A ++ +MV G+ P+ + YN L
Sbjct: 612 EEIFREM-RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 179 AYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHP 238
+ + GE +A+++L EM + PN T I+ GYCK G++ +A R MK + P
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 239 NLVVFNSLIKGFLDIKDSDGVDKALTLM-------------------------------- 266
+ V+ +L+ G + D V++A+T+
Sbjct: 731 DSFVYTTLVDGCCRLND---VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTE 787
Query: 267 ----------EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSIL 316
+ FG KP+ VT++ ++D G + +E+F M A + P + ++ L
Sbjct: 788 VLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846
Query: 317 AKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM----- 371
GY + G + + G+ P+ +M++ +I+ + +A+ + ++M
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906
Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST-IQLVADS 424
+ G ++ T LL G+ + + AE++++ M P +T I+L+ +S
Sbjct: 907 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINES 960
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 167/371 (45%), Gaps = 23/371 (6%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
MN L K +A IF + +G P + +Y L+ ++ + S+ ++ ++G+
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
P+ I++N ++ SG +++A ++ +M G P TY T+I GY G E+ +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
L M K + P+ Y LV C N +E A ++ G +N L
Sbjct: 719 LFDEMKL-KGLVPDSFVYTTLVDGCCRLNDVERAIT-IFGTNKKGCASSTAPFNALINWV 776
Query: 181 AQYGETYRAEQMLFEMQNNQV----RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
++G+T ++L + + +PN+ T I++ CKEGN+E A ++M+ +
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836
Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF------GVKPDVVTFSTIMDAWSSAGL 290
P ++ + SL+ G+ D + + + F G++PD + +S I++A+ G+
Sbjct: 837 MPTVITYTSLLNGY------DKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890
Query: 291 MGKCQEIFDDM-----VKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNV 345
K + D M V G + I L G+ + GE + AE ++ +M + P+
Sbjct: 891 TTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDS 950
Query: 346 VMFTTVISGWC 356
+I+ C
Sbjct: 951 ATVIELINESC 961
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 185/437 (42%), Gaps = 67/437 (15%)
Query: 5 VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
+ KG EA ++F+ + P L L+ AL R R L L V K GM +
Sbjct: 162 IAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNR----LDLFWDVYK-GMVERN 216
Query: 65 ILFNA-----MINACSESGNV---------------------DEAMKIFQKMKDSGCKPT 98
++F+ +I A +GNV D A+K+ + M G P
Sbjct: 217 VVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPL 276
Query: 99 TSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVV 158
TY+ LI G + + E++ LL M V ++ TY++L+ + + A +V
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDS-LGVSLDNHTYSLLIDGLLKGRNADAAKGLV 335
Query: 159 YKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKE 218
++MV+ GI Y+ ++ G +A+ + M + + P + ++ GYC+E
Sbjct: 336 HEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCRE 395
Query: 219 GNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTF 278
N+ L MK+ N+V+ P T+
Sbjct: 396 KNVRQGYELLVEMKK----RNIVI-----------------------------SP--YTY 420
Query: 279 STIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRK 338
T++ S+G + I +M+ +G P++ +++ L K +++ A +L M++
Sbjct: 421 GTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKE 480
Query: 339 YGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWR 398
G+ P++ + ++I G A +M A S +M E G+ PN TY + GY EA +
Sbjct: 481 QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS 540
Query: 399 AEELLQVMEEKGVRPKK 415
A++ ++ M E GV P K
Sbjct: 541 ADKYVKEMRECGVLPNK 557
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 7/160 (4%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
++ L +G A +F+ + PT+ITYT+L+ + R + + + G+
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGI 871
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKM-----KDSGCKPTTSTYNTLIKGYGNVGKP 115
+PD I+++ +INA + G +A+ + +M D GCK + ST L+ G+ VG+
Sbjct: 872 EPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEM 931
Query: 116 EESLKLLQLMSQDKNVKPNDRTYNILVRAWC-SKNSIEEA 154
E + K+++ M + + + P+ T L+ C S N EA
Sbjct: 932 EVAEKVMENMVRLQYI-PDSATVIELINESCISSNQRVEA 970
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 119/313 (38%), Gaps = 67/313 (21%)
Query: 112 VGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAV 171
V P + L + K + +++ L C+ S E+A +VV +M+ P A
Sbjct: 74 VDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERN-WPVAE 132
Query: 172 TYNTLARAYAQY-GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYR 230
++++ R ++ G++ + +LF GI+ GY +G +E+A+
Sbjct: 133 VWSSIVRCSQEFVGKS--DDGVLF--------------GILFDGYIAKGYIEEAVFVFSS 176
Query: 231 MKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGL 290
LE+ P L L+ L W+ L
Sbjct: 177 SMGLELVPRLSRCKVLLDALL--------------------------------RWNRLDL 204
Query: 291 MGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTT 350
+++ MV+ + D+ + +L + RAG Q + +L K F T
Sbjct: 205 F---WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE--------FRT 253
Query: 351 VISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
A+K++ +M +C+ G+ P TY+ L+ G + K+ A+ LL M+ G
Sbjct: 254 ATLNVDGALKLKESM-----ICK-GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG 307
Query: 411 VRPKKSTIQLVAD 423
V T L+ D
Sbjct: 308 VSLDNHTYSLLID 320
Score = 39.7 bits (91), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 115/292 (39%), Gaps = 37/292 (12%)
Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
LD+ + +KAL+++E + + + WSS + +C + F G D
Sbjct: 105 LDLCNFGSFEKALSVVERM-----IERNWPVAEVWSS---IVRCSQEF-----VGKSDDG 151
Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
+F IL GY+ G ++A + +S + P + ++ ++ +Y+
Sbjct: 152 VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211
Query: 371 MCEIGINPNLKTYETLLWGYGEA-------------KQPWR--------AEELLQVMEEK 409
M E + ++KTY L+ + A ++ +R A +L + M K
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 410 GVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESIHRKQNLSAS 469
G+ P K T ++ D I +AK +L + S+ N + ++ + + +N A+
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 470 NSTFLQIPGVVSSEHNGSSAAKIRSQIVLRSDTVWTATKSLFVNTYGSGVQP 521
+ +VS N V+ + V K+LF SG+ P
Sbjct: 332 KGL---VHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 192 bits (487), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 214/421 (50%), Gaps = 1/421 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+N L GK +A + + ++E G +P +TY ++ + + + + L+ K+E+ +
Sbjct: 200 VNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
K D++ ++ +I+ + G++D A +F +M+ G K TYNTLI G+ N G+ ++ K
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK 319
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
LL+ M + K + PN T+++L+ ++ + + EA ++ +M+ GI P+ +TYN+L +
Sbjct: 320 LLRDMIKRK-ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
+ A QM+ M + P+ T I+++GYCK ++D + M V N
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
V +N+L++GF + K M V+PD+V++ ++D G + K EIF
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
+ K+ +E DI ++ I+ G A + A + S+ GV + + +IS C
Sbjct: 499 IEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDS 558
Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
+ +A ++ KM E G P+ TY L+ + A EL++ M+ G ST+++
Sbjct: 559 LSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKM 618
Query: 421 V 421
V
Sbjct: 619 V 619
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 222/440 (50%), Gaps = 1/440 (0%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K +A +F +I+ PT+I + L +A+ + K+++ +L+L ++E G+ +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
MIN + A K+ G +P T +NTL+ G + E+L+L+ M +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
+ KP T N LV C + +A ++ +MV +G QP+ VTY + + G+T
Sbjct: 188 GH-KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
A ++L +M+ ++ + II+ G CK+G++++A M+ +++ +N+LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
GF + D K L M + + P+VVTFS ++D++ G + + ++ +M++ GI P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
+ ++ L G+ + ++A ++ M G P+++ F +I+G+C A ++ + ++
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
+M G+ N TY TL+ G+ ++ + A++L Q M + VRP + +++ D
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 429 GLAREAKRVLKSAEEDRQSM 448
G +A + E+ + +
Sbjct: 487 GELEKALEIFGKIEKSKMEL 506
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 204/393 (51%), Gaps = 1/393 (0%)
Query: 20 LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
+++ G+ P + + TL+ L + R L L+ ++ + G KP I N ++N +G
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGK 208
Query: 80 VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
V +A+ + +M ++G +P TY ++ G+ +++LL+ M +++N+K + Y+
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKYS 267
Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
I++ C S++ A+N+ +M G + D +TYNTL + G ++L +M
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
++ PN T +++ + KEG + +A + L M + + PN + +NSLI GF +
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
+ + LM G PD++TF+ +++ + A + E+F +M G+ + ++ L +G
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
+ ++G+ + A+ + M V P++V + ++ G C+ ++++A+ I+ K+ + + +
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507
Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
+ Y ++ G A + A +L + KGV+
Sbjct: 508 IGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 171/350 (48%), Gaps = 1/350 (0%)
Query: 4 LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
L G A +FN + +G + +ITY TL+ R+ L+ + K + P+
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 64 SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
+ F+ +I++ + G + EA ++ ++M G P T TYN+LI G+ + EE+++++
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
LM K P+ T+NIL+ +C N I++ + +M G+ + VTYNTL + + Q
Sbjct: 393 LMIS-KGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
G+ A+++ EM + +VRP+ + I++ G C G +E A+ ++++ ++ ++ ++
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
+I G + D + GVK D ++ ++ + K +F M +
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571
Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVIS 353
G PD ++IL + ++ + A ++ M+ G +V VI+
Sbjct: 572 EGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 142/299 (47%), Gaps = 5/299 (1%)
Query: 4 LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
V +GK EA + +++ G P ITY +L+ ++ R + + ++ + G PD
Sbjct: 343 FVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPD 402
Query: 64 SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
+ FN +IN ++ +D+ +++F++M G T TYNTL++G+ GK E + KL Q
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
M + V+P+ +Y IL+ C +E+A + K+ S ++ D Y +
Sbjct: 463 EMVS-RRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNA 521
Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
+ A + + V+ + R I++S C++ ++ A +M E P+ + +
Sbjct: 522 SKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
N LI+ L D+ + + M+ G DV T +++ SS G+ + F DM+
Sbjct: 582 NILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS----GELDKSFLDML 636
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 192 bits (487), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 234/485 (48%), Gaps = 47/485 (9%)
Query: 5 VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTR----------------------- 41
+ +GKPH A IF +I +P L+T TL+ L R
Sbjct: 142 LHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVS 201
Query: 42 ---------------QKRFKSILSLISK-VEKDGMKPDSILFNAMINACSESGNVDEAMK 85
+ + + L ++ + V + + PD++ +N ++ A S+ G + + +
Sbjct: 202 LNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKE 261
Query: 86 IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
+ MK +G P TYN L+ GY +G +E+ ++++LM Q NV P+ TYNIL+
Sbjct: 262 LLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ-TNVLPDLCTYNILINGL 320
Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
C+ S+ E ++ M + +QPD VTYNTL + G + A +++ +M+N+ V+ N+
Sbjct: 321 CNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQ 380
Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKEL-EVH---PNLVVFNSLIKGFLDIKDSDGVDK 261
T I + CKE E R ++KEL ++H P++V +++LIK +L + D G +
Sbjct: 381 VTHNISLKWLCKEEKREAVTR---KVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALE 437
Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
+ M + G+K + +T +TI+DA + + + + K G D + L G+
Sbjct: 438 MMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFF 497
Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLK 381
R + +KA + M+K + P V F ++I G C+ K + AM ++++ E G+ P+
Sbjct: 498 REEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDS 557
Query: 382 TYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSA 441
T+ +++ GY + + +A E + +P T ++ + G+ +A +
Sbjct: 558 TFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL 617
Query: 442 EEDRQ 446
E+R+
Sbjct: 618 IEERE 622
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 204/437 (46%), Gaps = 9/437 (2%)
Query: 7 KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
KG+ + + + + G P +TY LV + K ++ +++ + PD
Sbjct: 253 KGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCT 312
Query: 67 FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
+N +IN +G++ E +++ MK +P TYNTLI G +G E+ KL++ M
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372
Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMV-ASGIQPDAVTYNTLARAYAQYGE 185
D VK N T+NI ++ C + E V ++V G PD VTY+TL +AY + G+
Sbjct: 373 ND-GVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431
Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
A +M+ EM ++ N T I+ CKE +++A L + + V + +
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGT 491
Query: 246 LIKGFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
LI GF + V+KAL + M++ + P V TF++++ G E FD++
Sbjct: 492 LIMGFF---REEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548
Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
++G+ PD F+ + GY + G +KA K+ P+ +++G C +
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE 608
Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
+A++ + + E + TY T++ + + K+ A +LL MEEKG+ P + T
Sbjct: 609 KALNFFNTLIE-EREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFI 667
Query: 423 DSWRAIGLAREAKRVLK 439
G E +LK
Sbjct: 668 SLLMEDGKLSETDELLK 684
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 113/231 (48%), Gaps = 2/231 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
++ L + K EAH + N + G +TY TL+ R+++ + L + +++K +
Sbjct: 458 LDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKI 517
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
P FN++I G + AM+ F ++ +SG P ST+N++I GY G+ E++ +
Sbjct: 518 TPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFE 577
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
S + KP++ T NIL+ C + E+A N ++ + D VTYNT+ A+
Sbjct: 578 FYN-ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAF 635
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
+ + A +L EM+ + P+ T +S ++G + + L +
Sbjct: 636 CKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 74/193 (38%), Gaps = 39/193 (20%)
Query: 286 SSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ------------------ 327
+S + C + + P +F I Y+ G+P
Sbjct: 107 TSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNL 166
Query: 328 --------------------KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
A + M K GV NV F +++G+C K++ A+ +
Sbjct: 167 LTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGM 226
Query: 368 YEKMC-EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWR 426
E+M E +NP+ TY T+L + + +ELL M++ G+ P + T + +
Sbjct: 227 LERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYC 286
Query: 427 AIGLAREAKRVLK 439
+G +EA ++++
Sbjct: 287 KLGSLKEAFQIVE 299
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 210/419 (50%), Gaps = 1/419 (0%)
Query: 7 KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
+G ++ IF + G P++ T ++ ++ + S+ S + ++ K + PD
Sbjct: 136 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVAT 195
Query: 67 FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
FN +IN G+ +++ + QKM+ SG PT TYNT++ Y G+ + +++LL M
Sbjct: 196 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM- 254
Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
+ K V + TYN+L+ C N I + + ++ M I P+ VTYNTL ++ G+
Sbjct: 255 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 314
Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
A Q+L EM + + PN T ++ G+ EGN ++A++ Y M+ + P+ V + L
Sbjct: 315 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 374
Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
+ G + D M+ GV +T++ ++D G + + + ++M K GI
Sbjct: 375 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI 434
Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
+PDI +S L G+ + G + A+ I+ + + G+ PN ++++T+I C ++ A+
Sbjct: 435 DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIR 494
Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
IYE M G + T+ L+ +A + AEE ++ M G+ P + + + +
Sbjct: 495 IYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 553
Score = 185 bits (470), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 202/407 (49%), Gaps = 1/407 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+N+L +G ++ Y+ + + G+ PT++TY T++ ++ RFK+ + L+ ++ G+
Sbjct: 200 INVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV 259
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
D +N +I+ S + + + + M+ P TYNTLI G+ N GK + +
Sbjct: 260 DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQ 319
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
LL M + PN T+N L+ S+ + +EA + Y M A G+ P V+Y L
Sbjct: 320 LLNEM-LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 378
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
+ E A M+ N V T ++ G CK G +++A+ L M + + P++
Sbjct: 379 CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 438
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
V +++LI GF + + + + G+ P+ + +ST++ G + + I++
Sbjct: 439 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 498
Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
M+ G D F++L +AG+ +AE + M G+ PN V F +I+G+ N+ +
Sbjct: 499 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 558
Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVME 407
+A S++++M ++G +P TY +LL G + AE+ L+ +
Sbjct: 559 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 190/422 (45%), Gaps = 2/422 (0%)
Query: 5 VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
+ +G EA +F + +G P+ ++Y L+ L + F +++++G+
Sbjct: 344 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 403
Query: 65 ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
I + MI+ ++G +DEA+ + +M G P TY+ LI G+ VG+ + + +++
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463
Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
+ + + PN Y+ L+ C ++EA + M+ G D T+N L + + G
Sbjct: 464 IYR-VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 522
Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
+ AE+ + M ++ + PN + +++GY G A M ++ HP +
Sbjct: 523 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 582
Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
SL+KG +K L + D V ++T++ A +G + K +F +MV+
Sbjct: 583 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 642
Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG-VHPNVVMFTTVISGWCNAVKMQR 363
I PD + ++ L G R G+ A G V PN VM+T + G A + +
Sbjct: 643 SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 702
Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
+ E+M +G P++ T ++ GY + + +LL M + P +T ++
Sbjct: 703 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 762
Query: 424 SW 425
+
Sbjct: 763 GY 764
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 196/453 (43%), Gaps = 43/453 (9%)
Query: 4 LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
L G EA + N + ++G P ++TY+ L+ + RFK+ ++ ++ + G+ P+
Sbjct: 413 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 472
Query: 64 SILFNAMINACSESGNVDEAMKIFQKMKDSG---------------CK------------ 96
I+++ +I C G + EA++I++ M G CK
Sbjct: 473 GIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 532
Query: 97 --------PTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
P T +++ LI GYGN G+ ++ + M++ + P TY L++ C
Sbjct: 533 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH-HPTFFTYGSLLKGLCKG 591
Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
+ EA + + A D V YNTL A + G +A + EM + P+ T
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651
Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELE----VHPNLVVFNSLIKGFLDIKDSDGVDKALT 264
++SG C++G A+ F KE E V PN V++ + G
Sbjct: 652 TSLISGLCRKGKTVIAILF---AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE 708
Query: 265 LMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAG 324
M+ G PD+VT + ++D +S G + K ++ +M P++ ++IL GY +
Sbjct: 709 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 768
Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
+ + + S+ G+ P+ + +++ G C + ++ + I + G+ + T+
Sbjct: 769 DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 828
Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
L+ + A +L++VM G+ K T
Sbjct: 829 MLISKCCANGEINWAFDLVKVMTSLGISLDKDT 861
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 184/421 (43%), Gaps = 9/421 (2%)
Query: 27 PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
P + YT V + + ++K+ + +++ G PD + NAMI+ S G +++ +
Sbjct: 682 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 741
Query: 87 FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
+M + P +TYN L+ GY S L + + + + P+ T + LV C
Sbjct: 742 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN-GILPDKLTCHSLVLGIC 800
Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
N +E ++ + G++ D T+N L GE A ++ M + + ++
Sbjct: 801 ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKD 860
Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
TC +VS + +++ L+ M + + P + LI G + D + A +
Sbjct: 861 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD---IKTAFVVK 917
Query: 267 EEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
EE + P V S ++ A + G + + M+K + P I F+ L +
Sbjct: 918 EEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKN 977
Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
G +A + M G+ ++V + +I+G C M A +YE+M G N TY
Sbjct: 978 GNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTY 1037
Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
+ L+ G + + ++ ++++ R +++ L DS R + +A E + L+S ++
Sbjct: 1038 KALIRGLLARETAFSGADI--ILKDLLARGFITSMSLSQDSHRNLKMAMEKLKALQSNKK 1095
Query: 444 D 444
D
Sbjct: 1096 D 1096
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 138/321 (42%)
Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
LM+ + N Y+IL+R + + I+++ + M G P T N + + +
Sbjct: 112 LMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKS 171
Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
GE L EM ++ P+ T I+++ C EG+ E + + +M++ P +V +
Sbjct: 172 GEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTY 231
Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
N+++ + + L M+ GV DV T++ ++ + + K + DM K
Sbjct: 232 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 291
Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
I P+ ++ L G+ G+ A +L M +G+ PN V F +I G + +
Sbjct: 292 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351
Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
A+ ++ M G+ P+ +Y LL G + + A M+ GV + T + D
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411
Query: 424 SWRAIGLAREAKRVLKSAEED 444
G EA +L +D
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKD 432
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 1/235 (0%)
Query: 16 IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
++ +I G P +T +LV + + L ++ G++ D FN +I+ C
Sbjct: 776 LYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCC 835
Query: 76 ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
+G ++ A + + M G T + ++ + +ES +L MS+ + + P
Sbjct: 836 ANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK-QGISPES 894
Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
R Y L+ C I+ A+ V +M+A I P V + + RA A+ G+ A +L
Sbjct: 895 RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRF 954
Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
M ++ P + ++ CK GN+ +A+ M + +LV +N LI G
Sbjct: 955 MLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 1/169 (0%)
Query: 11 HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
E+ + + + ++G P Y L+ L R K+ + ++ + P ++ +AM
Sbjct: 876 QESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAM 935
Query: 71 INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
+ A ++ G DEA + + M PT +++ TL+ G E+L+L +MS +
Sbjct: 936 VRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMS-NCG 994
Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARA 179
+K + +YN+L+ C+K + A+ + +M G +A TY L R
Sbjct: 995 LKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%)
Query: 8 GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
GK EA + +++ PT+ ++TTL+ + L L + G+K D + +
Sbjct: 943 GKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSY 1002
Query: 68 NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKG 108
N +I G++ A +++++MK G +TY LI+G
Sbjct: 1003 NVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 217/414 (52%), Gaps = 4/414 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
MN +P+ A +++ G P ++T+T+L+ R + +S+++++ + G+
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
KPD +++ +I++ ++G+V+ A+ +F +M++ G +P Y +L+ G N G+ ++
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
LL+ M++ K +KP+ T+N L+ A+ + +A + +M+ I P+ TY +L +
Sbjct: 234 LLRGMTKRK-IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
G A QM + M+ P+ +++G+CK ++DAM+ Y M + + N
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
+ + +LI+GF + + + + M GV P++ T++ ++ G + K IF+D
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 301 MVKA---GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
M K G+ P+I +++L G G+ +KA + MRK + ++ +T +I G C
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK 472
Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
A K++ A++++ + G+ PN+ TY T++ G A L + M+E GV
Sbjct: 473 AGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 218/472 (46%), Gaps = 39/472 (8%)
Query: 11 HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSIL--------------------- 49
+EA +F ++E P++I +T L+ + + K+F ++
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 50 --------------SLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGC 95
S + K+ K G +PD + F ++IN ++EAM + +M + G
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 96 KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
KP Y T+I G +L L M ++ ++P+ Y LV C+ +A
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQM-ENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
+++ M I+PD +T+N L A+ + G+ AE++ EM + PN T +++G+
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
C EG +++A + Y M+ P++V + SLI GF K D K M + G+ +
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
+T++T++ + G QE+F MV G+ P+I +++L G+ +KA I
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 336 MRKY---GVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGE 392
M+K GV PN+ + ++ G C K+++A+ ++E M + ++ + TY ++ G +
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK 472
Query: 393 AKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
A + A L + KGV+P T + GL EA + + +ED
Sbjct: 473 AGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKED 524
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 221/476 (46%), Gaps = 5/476 (1%)
Query: 24 GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
G +P + T+ L+ AL R + + + ++ + G+ PD F ++ E G++D A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 84 MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
++I ++M + GC + + N ++ G+ G+ E++L +Q MS P+ T+N LV
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
C ++ A ++ M+ G PD TYN++ + GE A ++L +M P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
N T ++S CKE +E+A + + P++ FNSLI+G ++ +
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
M G +PD T++ ++D+ S G + + + M +G + ++ L G+ +A
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
+ ++AE I M +GV N V + T+I G C + +++ A + ++M G P+ TY
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543
Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
+LL + +A +++Q M G P T + G A ++L+S +
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Query: 444 DRQSMPNKKDEIAVESIHRKQNLSASNSTFLQIPGVVSSEHNGSSAAKIRSQIVLR 499
++ ++ + RK+ + + + F ++ E N + + +IV R
Sbjct: 604 KGINLTPHAYNPVIQGLFRKRKTTEAINLFREM-----LEQNEAPPDAVSYRIVFR 654
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 203/396 (51%), Gaps = 4/396 (1%)
Query: 20 LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVE-KDGMKPDSILFNAMINACSESG 78
++E G + ++ +V ++ R + L+ I ++ +DG PD FN ++N ++G
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 79 NVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL-QLMSQDKNVKPNDRT 137
+V A++I M G P TYN++I G +G+ +E++++L Q++++D PN T
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD--CSPNTVT 367
Query: 138 YNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQ 197
YN L+ C +N +EEA + + + GI PD T+N+L + A ++ EM+
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 198 NNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
+ P+E T +++ C +G +++A+ L +M+ +++ +N+LI GF +
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487
Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
++ ME GV + VT++T++D + + ++ D M+ G +PD + ++ L
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
+ R G+ +KA I+ +M G P++V + T+ISG C A +++ A + + GIN
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIN 607
Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
Y ++ G ++ A L + M E+ P
Sbjct: 608 LTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643
Score = 172 bits (437), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 196/399 (49%), Gaps = 9/399 (2%)
Query: 48 ILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIK 107
+ +L SK K P+ L+ ++ SG+ D+ KI + MK S C+ TST+ LI+
Sbjct: 69 LFNLASK--KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIE 126
Query: 108 GYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQ 167
Y +E L ++ M + +KP+ YN ++ NS++ KM GI+
Sbjct: 127 SYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIK 186
Query: 168 PDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRF 227
PD T+N L +A + + A ML +M + + P+E+T ++ GY +EG+++ A+R
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 228 LYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF----GVKPDVVTFSTIMD 283
+M E + V N ++ GF V+ AL ++E G PD TF+T+++
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFC---KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 284 AWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHP 343
AG + EI D M++ G +PD++ ++ + G + GE ++A +L M P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 344 NVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELL 403
N V + T+IS C +++ A + + GI P++ T+ +L+ G + A EL
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 404 QVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
+ M KG P + T ++ DS + G EA +LK E
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 194/394 (49%), Gaps = 9/394 (2%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+N L G A I + +++EG+ P + TY ++++ L + K + ++ ++
Sbjct: 302 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC 361
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
P+++ +N +I+ + V+EA ++ + + G P T+N+LI+G +++
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 421
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
L + M + K +P++ TYN+L+ + CSK ++EA N++ +M SG +TYNTL +
Sbjct: 422 LFEEM-RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
+ +T AE++ EM+ + V N T ++ G CK +EDA + + +M P+
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Query: 241 VVFNSLIKGFL---DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
+NSL+ F DIK + + +A+T G +PD+VT+ T++ AG + ++
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMT---SNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG-VHPNVVMFTTVISGWC 356
+ GI H ++ + +G R + +A ++ M + P+ V + V G C
Sbjct: 598 LRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLC 657
Query: 357 N-AVKMQRAMSIYEKMCEIGINPNLKTYETLLWG 389
N ++ A+ ++ E G P + L G
Sbjct: 658 NGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEG 691
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 112/254 (44%), Gaps = 17/254 (6%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K EA IF+ + G +TY TL+ L + +R + L+ ++ +G KPD +N
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYN 544
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
+++ G++ +A I Q M +GC+P TY TLI G G+ E + KLL+ + Q
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI-QM 603
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASG-IQPDAVTYNTLARAYAQYGETY 187
K + YN +++ K EA N+ +M+ PDAV+Y + R G
Sbjct: 604 KGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPI 663
Query: 188 R-AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFL------YRMKELEVHPNL 240
R A L E+ P + ++ G E ++ + R E EV
Sbjct: 664 REAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEV---- 719
Query: 241 VVFNSLIKGFLDIK 254
S++KG L I+
Sbjct: 720 ----SMVKGLLKIR 729
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 86/196 (43%), Gaps = 1/196 (0%)
Query: 257 DGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV-KAGIEPDIHVFSI 315
D + K L M+ + TF ++++++ L + + D M+ + G++PD H ++
Sbjct: 100 DDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNR 159
Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
+ V + E M +G+ P+V F +I C A +++ A+ + E M G
Sbjct: 160 MLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYG 219
Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
+ P+ KT+ T++ GY E A + + M E G ++ ++ + G +A
Sbjct: 220 LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279
Query: 436 RVLKSAEEDRQSMPNK 451
++ P++
Sbjct: 280 NFIQEMSNQDGFFPDQ 295
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 193/384 (50%), Gaps = 1/384 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
M+ + +P A +++ G P L+T+T+L+ R + ++L ++ G
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
KP+ + + +I ++ +++ A+++F +M +G +P TYN L+ G +G+ ++
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
LL+ M + + ++PN T+ L+ A+ + EA + M+ + PD TY +L
Sbjct: 245 LLRDMMK-RRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
YG A QM + M+ N PNE ++ G+CK +ED M+ Y M + V N
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
+ + LI+G+ + D + M PD+ T++ ++D G + K IF+
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423
Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
M K ++ +I ++I+ +G + G+ + A + S+ G+ PNV+ +TT+ISG+C
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483
Query: 361 MQRAMSIYEKMCEIGINPNLKTYE 384
+ A S+++KM E G PN Y+
Sbjct: 484 IHEADSLFKKMKEDGFLPNESVYK 507
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 205/442 (46%), Gaps = 36/442 (8%)
Query: 11 HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSL------------------- 51
++A +F ++ P++I +T L++ + + R+ ++SL
Sbjct: 65 NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124
Query: 52 ----------------ISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGC 95
+ K+ K G +PD + F +++N +++A+ +F ++ G
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 96 KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
KP TY TLI+ +++L M + + +PN TYN LV C +A
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGS-RPNVVTYNALVTGLCEIGRWGDAA 243
Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
++ M+ I+P+ +T+ L A+ + G+ A+++ M V P+ T G +++G
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
C G +++A + Y M+ +PN V++ +LI GF K + K M + GV +
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
+T++ ++ + G QE+F+ M PDI +++L G G+ +KA I
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423
Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
MRK + N+V +T +I G C K++ A ++ + G+ PN+ TY T++ G+
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483
Query: 396 PWRAEELLQVMEEKGVRPKKST 417
A+ L + M+E G P +S
Sbjct: 484 IHEADSLFKKMKEDGFLPNESV 505
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 155/365 (42%), Gaps = 36/365 (9%)
Query: 81 DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
++A+ +F +M S P+ + L+ + + + + L + M Q + P T NI
Sbjct: 65 NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM-QILGIPPLLCTCNI 123
Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
++ C + A + KM+ G +PD VT+ +L
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSL------------------------ 159
Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
++GYC +EDA+ ++ + PN+V + +LI+ + +
Sbjct: 160 -----------LNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
+ M G +P+VVT++ ++ G G + DM+K IEP++ F+ L +
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268
Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
V+ G+ +A+ + M + V+P+V + ++I+G C + A ++ M G PN
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
Y TL+ G+ ++K+ ++ M +KGV T ++ + +G A+ V
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 441 AEEDR 445
R
Sbjct: 389 MSSRR 393
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 8/283 (2%)
Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE- 195
+Y ++R +A ++ +MV S P + + L A+ Y LFE
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNR-YDVVISLFEQ 108
Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
MQ + P TC I++ C A FL +M +L P+LV F SL+ G+
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYC---H 165
Query: 256 SDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
+ ++ A+ L ++ G KP+VVT++T++ + E+F+ M G P++
Sbjct: 166 WNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVT 225
Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
++ L G G A +L M K + PNV+ FT +I + K+ A +Y M
Sbjct: 226 YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285
Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
++ + P++ TY +L+ G A ++ +ME G P +
Sbjct: 286 QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 198/403 (49%), Gaps = 2/403 (0%)
Query: 16 IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
I +++ G+ P+++T +L+ R ++L+ ++ + G +PD++ F +++
Sbjct: 132 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 191
Query: 76 ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
+ EA+ + ++M GC+P TY +I G G+P+ +L LL M + K ++ +
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK-IEADV 250
Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
YN ++ C +++A+++ KM GI+PD TYN L YG A ++L +
Sbjct: 251 VIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSD 310
Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM-KELEVHPNLVVFNSLIKGFLDIK 254
M + P+ ++ + KEG + +A + M K P++V +N+LIKGF K
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFS 314
+ + M + G+ + VT++T++ + A Q +F MV G+ PDI ++
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 315 ILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEI 374
IL G G + A + M+K + ++V +TT+I C A K++ ++ +
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 375 GINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
G+ PN+ TY T++ G+ A+ L M+E G P T
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 203/413 (49%), Gaps = 2/413 (0%)
Query: 12 EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
EA + + ++E G++P +T+TTLV L + + ++L+ ++ G +PD + + A+I
Sbjct: 163 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 222
Query: 72 NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
N + G D A+ + KM+ + YNT+I G +++ L M + K +
Sbjct: 223 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM-ETKGI 281
Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
KP+ TYN L+ C+ +A ++ M+ I PD V +N L A+ + G+ AE+
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341
Query: 192 MLFEM-QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
+ EM ++ P+ ++ G+CK +E+ M M + + N V + +LI GF
Sbjct: 342 LYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF 401
Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
+D D M GV PD++T++ ++D + G + +F+ M K ++ DI
Sbjct: 402 FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDI 461
Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
++ + + +AG+ + + S+ GV PNVV +TT++SG+C + A +++ +
Sbjct: 462 VTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVE 521
Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
M E G PN TY TL+ + EL++ M G ST LV +
Sbjct: 522 MKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTN 574
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 209/432 (48%), Gaps = 11/432 (2%)
Query: 24 GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
G L TY+ + R+ + L+++ K+ K G P + N+++N + EA
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 84 MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
+ + +M + G +P T T+ TL+ G K E++ L++ M K +P+ TY ++
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV-KGCQPDLVTYGAVIN 223
Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
C + + A N++ KM I+ D V YNT+ +Y A + +M+ ++P
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
+ T ++S C G DA R L M E ++P+LV FN+LI F +K+ V+ A
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAF--VKEGKLVE-AE 340
Query: 264 TLMEEFGVK-----PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
L +E VK PDVV ++T++ + + + E+F +M + G+ + ++ L
Sbjct: 341 KLYDEM-VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
G+ +A + A+ + M GVHP+++ + ++ G CN ++ A+ ++E M + +
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
++ TY T++ +A + +L + KGV+P T + + GL EA +
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 439 KSAEEDRQSMPN 450
+ED +PN
Sbjct: 520 VEMKED-GPLPN 530
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 195/416 (46%), Gaps = 37/416 (8%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K +A +F +++ P+++ ++ L++A+ + +F ++SL +++ G+ + ++
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
IN + A+ I KM G P+ T N+L+ G
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNG-------------------- 154
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
+C N I EA +V +MV G QPD VT+ TL Q+ +
Sbjct: 155 ----------------FCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASE 198
Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
A ++ M +P+ T G +++G CK G + A+ L +M++ ++ ++V++N++I
Sbjct: 199 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIID 258
Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
G K D ME G+KPDV T++ ++ + G + DM++ I P
Sbjct: 259 GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINP 318
Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKY-GVHPNVVMFTTVISGWCNAVKMQRAMSI 367
D+ F+ L +V+ G+ +AE + M K P+VV + T+I G+C +++ M +
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEV 378
Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
+ +M + G+ N TY TL+ G+ +A+ A+ + + M GV P T ++ D
Sbjct: 379 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLD 434
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 169/352 (48%), Gaps = 2/352 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+N L +G+P A + N + + ++ Y T++ L + K L +K+E G+
Sbjct: 222 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 281
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
KPD +N +I+ G +A ++ M + P +N LI + GK E+ K
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
L M + K+ P+ YN L++ +C +EE V +M G+ + VTY TL +
Sbjct: 342 LYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF 401
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
Q + A+ + +M ++ V P+ T I++ G C GN+E A+ M++ ++ ++
Sbjct: 402 FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDI 461
Query: 241 VVFNSLIKGFLDI-KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
V + ++I+ K DG D +L + GVKP+VVT++T+M + GL + +F
Sbjct: 462 VTYTTMIEALCKAGKVEDGWDLFCSLSLK-GVKPNVVTYTTMMSGFCRKGLKEEADALFV 520
Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
+M + G P+ ++ L + +R G+ + ++ MR G + F V
Sbjct: 521 EMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLV 572
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 142/307 (46%), Gaps = 14/307 (4%)
Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
+++A + MV S P V ++ L A A+ + + +MQN + N T I
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---ME 267
++ +C+ + A+ L +M +L P++V NSL+ GF + + +A+ L M
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFC---HGNRISEAVALVDQMV 172
Query: 268 EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQ 327
E G +PD VTF+T++ + + + MV G +PD+ + + G + GEP
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 328 KAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL- 386
A ++L M K + +VV++ T+I G C M A ++ KM GI P++ TY L
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 387 --LWGYGEAKQPWR-AEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
L YG W A LL M EK + P + D++ G EA+++ +
Sbjct: 293 SCLCNYGR----WSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 444 DRQSMPN 450
+ P+
Sbjct: 349 SKHCFPD 355
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 189 bits (480), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 215/427 (50%), Gaps = 6/427 (1%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K +A +F +++ P++ + L++A+ + K+F ++SL K+++ G+ + +N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
+IN + A+ + KM G +P+ T ++L+ GY + + +++ L+ M +
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE- 183
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
+P+ T+ L+ N EA +V +MV G QP+ VTY + + G+
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
A +L +M+ ++ N ++ CK + +DA+ M+ V PN++ ++SLI
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
+ + + L+ M E + P+VVTF+ ++DA+ G + + ++++D+M+K I+P
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 309 DIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIY 368
DI +S L G+ +A+ + M PNVV + T+I+G+C A ++ + ++
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 369 EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAI 428
+M + G+ N TY TL+ G+ +A+ A+ + + M GV P T + D
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD----- 478
Query: 429 GLAREAK 435
GL + K
Sbjct: 479 GLCKNGK 485
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 218/456 (47%), Gaps = 36/456 (7%)
Query: 24 GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
G L TY L+ R+ + L+L+ K+ K G +P + ++++N + +A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 84 MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
+ + +M + G +P T T+ TLI G K E++ L+ M Q + +PN TY ++V
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQPNLVTYGVVVN 233
Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
C + I+ A+N++ KM A+ I+ + V Y+T+ + +Y A + EM+N VRP
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293
Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD----------- 252
N T ++S C DA R L M E +++PN+V FN+LI F+
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 253 ---IKDS------------------DGVDKALTLMEEFGVK---PDVVTFSTIMDAWSSA 288
IK S D +D+A + E K P+VVT++T+++ + A
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Query: 289 GLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMF 348
+ + E+F +M + G+ + ++ L G+ +A + A+ + M GVHPN++ +
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473
Query: 349 TTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEE 408
T++ G C K+++AM ++E + + P + TY ++ G +A + +L +
Sbjct: 474 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 533
Query: 409 KGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEED 444
KGV+P + + GL EA + + ED
Sbjct: 534 KGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 197/398 (49%), Gaps = 1/398 (0%)
Query: 20 LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
++E G+RP IT+TTL+ L + ++L+ ++ + G +P+ + + ++N + G+
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 80 VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
+D A + KM+ + + Y+T+I +++L L M ++K V+PN TY+
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYS 299
Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
L+ C+ +A ++ M+ I P+ VT+N L A+ + G+ AE++ EM
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
+ P+ T +++G+C +++A M + PN+V +N+LI GF K D
Sbjct: 360 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG 419
Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
+ M + G+ + VT++T++ + A Q +F MV G+ P+I ++ L G
Sbjct: 420 VELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 479
Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
+ G+ +KA + +++ + P + + +I G C A K++ ++ + G+ P+
Sbjct: 480 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539
Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
+ Y T++ G+ A+ L + M E G P T
Sbjct: 540 VIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 103/196 (52%), Gaps = 1/196 (0%)
Query: 12 EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
EA ++F +I + P ++TY TL+ + KR + L ++ + G+ +++ + +I
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 72 NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
+ ++ + D A +F++M G P TYNTL+ G GK E+++ + + + + K +
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK-M 501
Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
+P TYNI++ C +E+ W++ + G++PD + YNT+ + + G A+
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561
Query: 192 MLFEMQNNQVRPNERT 207
+ +M+ + P+ T
Sbjct: 562 LFRKMREDGPLPDSGT 577
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 108/233 (46%), Gaps = 1/233 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
++ V +GK EA +++ +I+ P + TY++L+ R + +
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
P+ + +N +IN ++ +DE +++F++M G T TY TLI G+ + +
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
+ + M D V PN TYN L+ C +E+A V + S ++P TYN +
Sbjct: 457 VFKQMVSD-GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKE 233
+ G+ + + V+P+ ++SG+C++G E+A +M+E
Sbjct: 516 CKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%)
Query: 4 LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
L GK +A +F L PT+ TY ++ + + + + L + G+KPD
Sbjct: 480 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539
Query: 64 SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTST 101
I++N MI+ G +EA +F+KM++ G P + T
Sbjct: 540 VIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 201/391 (51%), Gaps = 9/391 (2%)
Query: 4 LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
L +G +A +F+ +I G +P + TYT L+ L R + + + K+ KD + P
Sbjct: 311 LCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPS 370
Query: 64 SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
I +NA+IN + G V A ++ M+ CKP T+N L++G VGKP +++ LL+
Sbjct: 371 VITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK 430
Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
M D + P+ +YN+L+ C + + A+ ++ M I+PD +T+ + A+ +
Sbjct: 431 RM-LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQ 489
Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV----HPN 239
G+ A L M + +E T ++ G CK G DA+ L + ++ + H
Sbjct: 490 GKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSL 549
Query: 240 LVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFD 299
V+ + L KG +K+ + L + + G+ P VVT++T++D +G + I +
Sbjct: 550 NVILDMLSKG-CKVKEELAM---LGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILE 605
Query: 300 DMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAV 359
M +G P+++ ++I+ G + G ++AE +L++M+ GV PN V +T ++ G+ N
Sbjct: 606 LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665
Query: 360 KMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
K+ RA+ M E G N + Y +LL G+
Sbjct: 666 KLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Score = 179 bits (454), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 192/399 (48%), Gaps = 1/399 (0%)
Query: 27 PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
P ++Y+ L+ L R + L ++ + G +P + + +I A + G +D+A +
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 87 FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
F +M GCKP TY LI G GK EE+ + + M +D+ + P+ TYN L+ +C
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDR-IFPSVITYNALINGYC 382
Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
+ A+ ++ M +P+ T+N L + G+ Y+A +L M +N + P+
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIV 442
Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
+ +++ G C+EG+M A + L M ++ P+ + F ++I F +D L LM
Sbjct: 443 SYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLM 502
Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
G+ D VT +T++D G I + +VK I H +++ + +
Sbjct: 503 LRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKV 562
Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
++ ++L + K G+ P+VV +TT++ G + + + I E M G PN+ Y +
Sbjct: 563 KEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTII 622
Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
+ G + + AE+LL M++ GV P T ++ +
Sbjct: 623 INGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 118/464 (25%), Positives = 216/464 (46%), Gaps = 38/464 (8%)
Query: 23 EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDE 82
+G +I Y T+V AL + ++ +SK+ K G DS + +++ N+ +
Sbjct: 189 DGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRD 248
Query: 83 AMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNIL 141
A+K+F M K+ C P + +Y+ LI G VG+ EE+ L M + K +P+ RTY +L
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGE-KGCQPSTRTYTVL 307
Query: 142 VRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQV 201
++A C + I++A+N+ +M+ G +P+ TY L + G+ A + +M +++
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Query: 202 RPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDK 261
P+ T +++GYCK+G + A L M++ PN+ FN L++G +
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427
Query: 262 ALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYV 321
L M + G+ PD+V+++ ++D G M ++ M IEPD F+ + +
Sbjct: 428 LLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFC 487
Query: 322 RAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE------------ 369
+ G+ A + L M + G+ + V TT+I G C K + A+ I E
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPH 547
Query: 370 -----------------------KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVM 406
K+ ++G+ P++ TY TL+ G + + +L++M
Sbjct: 548 SLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELM 607
Query: 407 EEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
+ G P ++ + G EA+++L SA +D PN
Sbjct: 608 KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL-SAMQDSGVSPN 650
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 194/412 (47%), Gaps = 5/412 (1%)
Query: 15 YIFNCLIEE-GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA 73
Y F+ L E G R Y++L+ +L + ++E DG I + ++NA
Sbjct: 145 YCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNA 204
Query: 74 CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP 133
++G + A K+ G + +L+ G+ ++LK+ +MS++ P
Sbjct: 205 LCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAP 264
Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
N +Y+IL+ C +EEA+ + +M G QP TY L +A G +A +
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324
Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
EM +PN T +++ G C++G +E+A +M + + P+++ +N+LI G+
Sbjct: 325 DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGY--C 382
Query: 254 KDSDGVD--KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
KD V + LT+ME+ KP+V TF+ +M+ G K + M+ G+ PDI
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIV 442
Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
+++L G R G A +L+SM + + P+ + FT +I+ +C K A + M
Sbjct: 443 SYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLM 502
Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
GI+ + T TL+ G + + A +L+ + + + ++ ++ D
Sbjct: 503 LRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILD 554
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 169/415 (40%), Gaps = 86/415 (20%)
Query: 8 GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
GKP++A ++ +++ G P +++Y L+ L R+ + L+S + ++PD + F
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTF 479
Query: 68 NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ---- 123
A+INA + G D A M G T TLI G VGK ++L +L+
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVK 539
Query: 124 ---------------LMSQDKNVK---------------PNDRTYNILVRAWCSKNSIEE 153
++S+ VK P+ TY LV I
Sbjct: 540 MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599
Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
++ ++ M SG P+ Y + Q+G AE++L MQ++ V PN T ++V
Sbjct: 600 SFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659
Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL---------------DI----K 254
GY G ++ A+ + M E N +++SL++GF+ DI
Sbjct: 660 GYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRET 719
Query: 255 DSDGVDKALTLMEEFG---------------------VKPDVV------------TFSTI 281
D + +++ ++++E+ G D+V I
Sbjct: 720 DPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDII 779
Query: 282 MDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM 336
M+++ S KC E+ ++K+G P F ++ +G + G+ ++A ++ +
Sbjct: 780 MESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMEL 834
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 137/328 (41%), Gaps = 39/328 (11%)
Query: 116 EESLKLLQLMSQDKNV---KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT 172
+E LKL+ + + V + N Y+ L+ + + A+ +M A G +
Sbjct: 138 KEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMID 197
Query: 173 YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM- 231
Y T+ A + G T AE + ++ + ++ G+C+ N+ DA++ M
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
KE+ PN V ++ LI G ++ L E FG+K
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVG---------RLEEAFGLK------------------- 289
Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
D M + G +P +++L K G KA ++ M G PNV +T +
Sbjct: 290 -------DQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVL 342
Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
I G C K++ A + KM + I P++ TY L+ GY + + A ELL VME++
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC 402
Query: 412 RPKKSTIQLVADSWRAIGLAREAKRVLK 439
+P T + + +G +A +LK
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLK 430
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 200/392 (51%), Gaps = 1/392 (0%)
Query: 31 TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
++ L+ + L+ ++ + G P+ +++ +I+ C + G +++A +F +M
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 91 KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
G TY LI G G ++ ++ + M +D V PN TYN ++ C
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQED-GVFPNLYTYNCVMNQLCKDGR 283
Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
++A+ V +M G+ + VTYNTL + + A +++ +M+++ + PN T
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343
Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
++ G+C G + A+ +K + P+LV +N L+ GF D+ G K + MEE G
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
+KP VT++ ++D ++ + M K ++ M + G+ PD+H +S+L G+ G+ +A
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463
Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
+ SM + PN V++ T+I G+C RA+ + ++M E + PN+ +Y ++
Sbjct: 464 RLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVL 523
Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
+ ++ AE L++ M + G+ P S + L++
Sbjct: 524 CKERKSKEAERLVEKMIDSGIDPSTSILSLIS 555
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 209/426 (49%), Gaps = 8/426 (1%)
Query: 17 FNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSE 76
FN +++ G P + L+ + F S ++ K + D F +I C E
Sbjct: 117 FNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSFGILIKGCCE 175
Query: 77 SGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR 136
+G ++++ + ++ + G P Y TLI G G+ E++ L M + + N+R
Sbjct: 176 AGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGK-LGLVANER 234
Query: 137 TYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEM 196
TY +L+ ++ + + KM G+ P+ TYN + + G T A Q+ EM
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 197 QNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDS 256
+ V N T ++ G C+E + +A + + +MK ++PNL+ +N+LI GF +
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK- 353
Query: 257 DGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
+ KAL+L + G+ P +VT++ ++ + G ++ +M + GI+P +
Sbjct: 354 --LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
+IL + R+ +KA + SM + G+ P+V ++ +I G+C +M A +++ M E
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLARE 433
PN Y T++ GY + +RA +LL+ MEEK + P ++ + + + ++E
Sbjct: 472 KNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKE 531
Query: 434 AKRVLK 439
A+R+++
Sbjct: 532 AERLVE 537
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 211/448 (47%), Gaps = 8/448 (1%)
Query: 8 GKPHEAHYIFNCLIE-----EGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP 62
GK H + + L+ E + Y ++ + + + +S +++ +G P
Sbjct: 68 GKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVP 127
Query: 63 DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLL 122
S FN ++ S + ++ F + K S ++ LIKG G+ E+S LL
Sbjct: 128 GSNCFNYLLTFVVGSSSFNQWWSFFNENK-SKVVLDVYSFGILIKGCCEAGEIEKSFDLL 186
Query: 123 QLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQ 182
+++ PN Y L+ C K IE+A ++ ++M G+ + TY L +
Sbjct: 187 IELTE-FGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245
Query: 183 YGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVV 242
G + +M +MQ + V PN T +++ CK+G +DA + M+E V N+V
Sbjct: 246 NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVT 305
Query: 243 FNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
+N+LI G + +K + M+ G+ P+++T++T++D + G +GK + D+
Sbjct: 306 YNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLK 365
Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
G+ P + ++IL G+ R G+ A ++ M + G+ P+ V +T +I + + M+
Sbjct: 366 SRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNME 425
Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
+A+ + M E+G+ P++ TY L+ G+ Q A L + M EK P + +
Sbjct: 426 KAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMI 485
Query: 423 DSWRAIGLAREAKRVLKSAEEDRQSMPN 450
+ G + A ++LK EE ++ PN
Sbjct: 486 LGYCKEGSSYRALKLLKEMEE-KELAPN 512
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 158/319 (49%), Gaps = 1/319 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+N L G + ++ + E+G P L TY ++ L + R K + ++ + G+
Sbjct: 240 INGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV 299
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
+ + +N +I ++EA K+ +MK G P TYNTLI G+ VGK ++L
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
L + + + + + P+ TYNILV +C K A +V +M GI+P VTY L +
Sbjct: 360 LCRDL-KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
A+ +A Q+ M+ + P+ T +++ G+C +G M +A R M E PN
Sbjct: 419 ARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNE 478
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
V++N++I G+ S K L MEE + P+V ++ +++ + + + +
Sbjct: 479 VIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEK 538
Query: 301 MVKAGIEPDIHVFSILAKG 319
M+ +GI+P + S++++
Sbjct: 539 MIDSGIDPSTSILSLISRA 557
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 147/293 (50%), Gaps = 1/293 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
MN L G+ +A +F+ + E G ++TY TL+ L R+ + ++ +++ DG+
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
P+ I +N +I+ G + +A+ + + +K G P+ TYN L+ G+ G + K
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
+++ M +++ +KP+ TY IL+ + +++E+A + M G+ PD TY+ L +
Sbjct: 395 MVKEM-EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF 453
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
G+ A ++ M PNE ++ GYCKEG+ A++ L M+E E+ PN+
Sbjct: 454 CIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNV 513
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGK 293
+ +I+ + S ++ + M + G+ P S I A + + + K
Sbjct: 514 ASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRAKNDSHVSSK 566
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 161/385 (41%), Gaps = 73/385 (18%)
Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
S LL +++ + K R Y +++ ++ S+ + + +MV +G P + +N L
Sbjct: 77 SSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLL 136
Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
+ ++ F ++V + + GI++ G C+ G +E +
Sbjct: 137 -TFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKS------------- 182
Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
F+ LI+ + EFG P+VV ++T++D G + K +++
Sbjct: 183 -----FDLLIE-----------------LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDL 220
Query: 298 FDDMVKA-----------------------------------GIEPDIHVFSILAKGYVR 322
F +M K G+ P+++ ++ + +
Sbjct: 221 FFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK 280
Query: 323 AGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKT 382
G + A + MR+ GV N+V + T+I G C +K+ A + ++M GINPNL T
Sbjct: 281 DGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLIT 340
Query: 383 YETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
Y TL+ G+ + +A L + ++ +G+ P T ++ + G A +++K E
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400
Query: 443 EDRQSMPNKKD-EIAVESIHRKQNL 466
E R P+K I +++ R N+
Sbjct: 401 E-RGIKPSKVTYTILIDTFARSDNM 424
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 216/424 (50%), Gaps = 5/424 (1%)
Query: 2 NILVG---KGKP-HEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
N+L+ KGK ++A +F+ ++ P+LITY TL+ + + + +++
Sbjct: 218 NVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKA 277
Query: 58 DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
D ++P I FN ++ ++G V++A + ++MKD G P T++ L GY + K E
Sbjct: 278 DHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEA 337
Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
+L + + + D VK N T +IL+ A C + IE+A ++ + +A G+ P+ V YNT+
Sbjct: 338 ALGVYE-TAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI 396
Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
Y + G+ A + M+ ++P+ ++ +C+ G ME+A + + +MK V
Sbjct: 397 DGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVS 456
Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
P++ +N LI G+ + D L ME+ G P+VV++ T+++ + + Q +
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIV 516
Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
DM G+ P + ++++L G G+ + A M K G+ N+V + T+I G
Sbjct: 517 KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSM 576
Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
K+ A + ++ G+ P++ TY +L+ GYG A R L + M+ G++P T
Sbjct: 577 TGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKT 636
Query: 418 IQLV 421
L+
Sbjct: 637 YHLL 640
Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 196/446 (43%), Gaps = 41/446 (9%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+N L +GK +A I + +G P + Y T++ R+ I +EK GM
Sbjct: 361 LNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM 420
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
KPD + +N +I E G ++ A K KMK G P+ TYN LI GYG + ++
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480
Query: 121 LLQLMS----------------------------------QDKNVKPNDRTYNILVRAWC 146
+L+ M +D+ V P R YN+L+ C
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC 540
Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
SK IE+A+ +M+ GI+ + VTYNTL + G+ AE +L E+ ++P+
Sbjct: 541 SKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVF 600
Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
T ++SGY GN++ + MK + P L ++ LI + +G++ L
Sbjct: 601 TYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI----SLCTKEGIELTERLF 656
Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
E +KPD++ ++ ++ ++ G M K + M++ I D ++ L G ++ G+
Sbjct: 657 GEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKL 716
Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
+ S++ M + P + ++ G C A Y +M E G ++ L
Sbjct: 717 CEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNEL 776
Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVR 412
+ G K+ WR++E V+ E R
Sbjct: 777 VSGL---KEEWRSKEAEIVISEMNGR 799
Score = 142 bits (357), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 177/387 (45%), Gaps = 7/387 (1%)
Query: 65 ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK-LLQ 123
+L + ++N ES + EA +F +++ G P++ + L+ + ++ L
Sbjct: 113 LLLSVLLN---ESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLN 169
Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
++ D +P+ Y ++A + + + + +M I P YN L +
Sbjct: 170 ILESD--FRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKG 227
Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
AEQ+ EM ++ P+ T ++ GYCK GN E + + RMK + P+L+ F
Sbjct: 228 KRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITF 287
Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
N+L+KG + + L M++ G PD TFS + D +SS +++ V
Sbjct: 288 NTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD 347
Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
+G++ + + SIL + G+ +KAE IL G+ PN V++ T+I G+C +
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVG 407
Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
A E M + G+ P+ Y L+ + E + AE+ + M+ KGV P T ++
Sbjct: 408 ARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIG 467
Query: 424 SWRAIGLAREAKRVLKSAEEDRQSMPN 450
+ + +LK ED +MPN
Sbjct: 468 GYGRKYEFDKCFDILKEM-EDNGTMPN 493
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 201/415 (48%), Gaps = 1/415 (0%)
Query: 20 LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
++E+ +P + Y L+ + R ++ ++ PD++ +N MI + G
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 80 VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
+D A+K+ ++ C+PT TY LI+ G +E+LKL+ M + +KP+ TYN
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM-LSRGLKPDMFTYN 267
Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
++R C + ++ A+ +V + G +PD ++YN L RA G+ E+++ +M +
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
+ PN T I+++ C++G +E+AM L MKE + P+ ++ LI F D
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387
Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
+ L M G PD+V ++T++ G + EIF + + G P+ ++ +
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447
Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
+G+ +A ++ M G+ P+ + + ++IS C + A + M +P+
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507
Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
+ TY +L G+ +A + A +L+ M G RP ++T ++ + G EA
Sbjct: 508 VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEA 562
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 194/405 (47%), Gaps = 42/405 (10%)
Query: 2 NILVG----KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEK 57
NI++G +GK A + N L+ + +PT+ITYT L+ A + L L+ ++
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256
Query: 58 DGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEE 117
G+KPD +N +I + G VD A ++ + ++ GC+P +YN L++ N GK EE
Sbjct: 257 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 316
Query: 118 SLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA 177
KL+ M +K PN TY+IL+ C IEEA N++ M G+ PDA +Y+ L
Sbjct: 317 GEKLMTKMFSEK-CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL- 374
Query: 178 RAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVH 237
++ +C+EG ++ A+ FL M
Sbjct: 375 ----------------------------------IAAFCREGRLDVAIEFLETMISDGCL 400
Query: 238 PNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
P++V +N+++ +D + + E G P+ +++T+ A S+G + +
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 460
Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
+M+ GI+PD ++ + R G +A +L MR HP+VV + V+ G+C
Sbjct: 461 ILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCK 520
Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEEL 402
A +++ A+++ E M G PN TY L+ G G A +RAE +
Sbjct: 521 AHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG--YRAEAM 563
Score = 162 bits (409), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 192/398 (48%), Gaps = 2/398 (0%)
Query: 41 RQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS 100
R + L L+ + + G PD IL +I N+ +A+++ + ++ G +P
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159
Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
YN LI G+ + + +++ ++L M + K+ P+ TYNI++ + CS+ ++ A V+ +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRM-RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
+++ QP +TY L A G A +++ EM + ++P+ T I+ G CKEG
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
++ A + ++ P+++ +N L++ L+ + +K +T M P+VVT+S
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
++ G + + + M + G+ PD + + L + R G A L +M G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
P++V + TV++ C K +A+ I+ K+ E+G +PN +Y T+ + RA
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
++ M G+ P + T + G+ EA +L
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 94/198 (47%), Gaps = 1/198 (0%)
Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
C+ GN +++ L M +P++++ LIKGF +++ + + ++E+FG +PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
++ +++ + + + D M PD ++I+ G+ A +L
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
+ P V+ +T +I + A+ + ++M G+ P++ TY T++ G +
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 396 PWRAEELLQVMEEKGVRP 413
RA E+++ +E KG P
Sbjct: 279 VDRAFEMVRNLELKGCEP 296
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 219/423 (51%), Gaps = 5/423 (1%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+N L +G+ EA + N ++ +G ++TY T+V + + KS L+L+SK+E+ +
Sbjct: 233 INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI 292
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
KPD ++++A+I+ + G+ +A +F +M + G P TYN +I G+ + G+ ++ +
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 352
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
LL+ M + + + P+ T+N L+ A + + EA + +M+ I PD VTYN++ +
Sbjct: 353 LLRDMIE-REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
++ A+ M M + P+ T I+ YC+ +++ M+ L + + N
Sbjct: 412 CKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
+N+LI GF ++ + + M GV PD +T + ++ + + + E+F+
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
+ + I+ D ++I+ G + + +A + S+ +GV P+V + +ISG+C
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 361 MQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQL 420
+ A ++ KM + G P+ TY TL+ G +A + ++ EL+ M G TI++
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 647
Query: 421 VAD 423
VAD
Sbjct: 648 VAD 650
Score = 162 bits (409), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 185/412 (44%), Gaps = 20/412 (4%)
Query: 26 RP--TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
RP T + ++ R R +SL K+E + + FN +I + + +
Sbjct: 101 RPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFS 160
Query: 84 MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ----------DKNVK- 132
+ F K+ G +P T+NTL+ G + E+L L M + D+ V+
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI 220
Query: 133 ---PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRA 189
P T+N L+ C + + EA +V KMV G+ D VTY T+ + G+T A
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280
Query: 190 EQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG 249
+L +M+ ++P+ I+ CK+G+ DA M E + PN+ +N +I G
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 340
Query: 250 FLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPD 309
F + L M E + PDV+TF+ ++ A G + + +++ D+M+ I PD
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 400
Query: 310 IHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYE 369
++ + G+ + A+ + M P+VV F T+I +C A ++ M +
Sbjct: 401 TVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLR 456
Query: 370 KMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
++ G+ N TY TL+ G+ E A++L Q M GV P T ++
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 139/306 (45%), Gaps = 21/306 (6%)
Query: 150 SIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCG 209
S+++A + MV S AV N + + + A + +M+ ++ N +
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 210 IIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL---- 265
I++ +C + ++ ++ +L P++V FN+L+ G D + +AL L
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCL---EDRISEALALFGYM 202
Query: 266 --------------MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
M E G+ P V+TF+T+++ G + + + + MV G+ D+
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
+ + G + G+ + A ++L+ M + + P+VV+++ +I C A ++ +M
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLA 431
E GI PN+ TY ++ G+ + A+ LL+ M E+ + P T + + G
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 432 REAKRV 437
EA+++
Sbjct: 383 FEAEKL 388
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
I +I+ F+IL K + + + S + K G P+VV F T++ G C ++ A+
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 366 SIY---------------EKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKG 410
+++ ++M EIG+ P + T+ TL+ G + A L+ M KG
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 411 VRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
+ T + + +G + A +L EE
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 186 bits (471), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 213/420 (50%), Gaps = 6/420 (1%)
Query: 16 IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
+F + + P++I ++ L++A+ + +F ++S K+E G+ + +N +IN
Sbjct: 65 LFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFC 124
Query: 76 ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
+ A+ + KM G +P T N+L+ G+ + + +++ L+ M + KP+
Sbjct: 125 RCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVE-MGYKPDT 183
Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
T+ L+ N EA ++ +MV G QPD VTY + + G+T A +L +
Sbjct: 184 VTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNK 243
Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKD 255
M+ ++ N ++ CK + +DA+ M+ V PN++ ++SLI +
Sbjct: 244 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGR 303
Query: 256 SDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSI 315
+ L+ M E + P++VTFS ++DA+ G + K ++++++M+K I+P+I +S
Sbjct: 304 WSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSS 363
Query: 316 LAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIG 375
L G+ +A+ +L M + PNVV + T+I+G+C A ++ + M ++ +M + G
Sbjct: 364 LINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG 423
Query: 376 INPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
+ N TY TL+ G+ +A+ A+ + + M GV P T ++ D GL + K
Sbjct: 424 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD-----GLCKNGK 478
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 205/413 (49%), Gaps = 7/413 (1%)
Query: 24 GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
G L TY L+ R R L+L+ K+ K G +PD + N+++N + +A
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 84 MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
+ + +M + G KP T T+ TLI G K E++ L+ M Q + +P+ TY +V
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQ-RGCQPDLVTYGAVVN 226
Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
C + + A N++ KM A+ I+ + V Y+T+ + +Y A + EM+N VRP
Sbjct: 227 GLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 286
Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
N T ++S C G DA R L M E +++PNLV F++LI F+ +K
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 264 TLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRA 323
M + + P++ T+S++++ + +G+ +++ + M++ P++ ++ L G+ +A
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKA 406
Query: 324 GEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTY 383
K + M + G+ N V +TT+I G+ A A ++++M +G++PN+ TY
Sbjct: 407 KRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 466
Query: 384 ETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV------ADSWRAIGL 430
LL G + + +A + + ++ + P T ++ A W+ G+
Sbjct: 467 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGI 519
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 169/317 (53%), Gaps = 1/317 (0%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K EA + + +++ G +P L+TY +V L ++ L+L++K+E ++ + ++++
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
+I++ + + D+A+ +F +M++ G +P TY++LI N G+ ++ +LL M +
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
K + PN T++ L+ A+ K + +A + +M+ I P+ TY++L +
Sbjct: 318 K-INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
A+QML M PN T +++G+CK ++ M M + + N V + +LI
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436
Query: 249 GFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEP 308
GF +D D M GV P+++T++ ++D G + K +F+ + ++ +EP
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496
Query: 309 DIHVFSILAKGYVRAGE 325
DI+ ++I+ +G +AG+
Sbjct: 497 DIYTYNIMIEGMCKAGK 513
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 164/361 (45%), Gaps = 38/361 (10%)
Query: 80 VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
+D+A+ +F M S P+ ++ L+ + K + + + M + + N TYN
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKM-EILGISHNLYTYN 117
Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
IL+ +C + + A ++ KM+ G +PD VT N+L
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSL----------------------- 154
Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKG-FLDIKDSDG 258
++G+C + DA+ + +M E+ P+ V F +LI G FL K S+
Sbjct: 155 ------------LNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
V + M + G +PD+VT+ +++ G + + M A IE ++ ++S +
Sbjct: 203 V-ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVID 261
Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
+ A ++ T M GV PNV+ ++++IS CN + A + M E INP
Sbjct: 262 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINP 321
Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438
NL T+ L+ + + + +AE+L + M ++ + P T + + + + EAK++L
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML 381
Query: 439 K 439
+
Sbjct: 382 E 382
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 108/219 (49%), Gaps = 1/219 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
++ L G+ +A + + +IE P L+T++ L+ A ++ + L ++ K +
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 354
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
P+ ++++IN + EA ++ + M C P TYNTLI G+ + ++ ++
Sbjct: 355 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
L + MSQ + + N TY L+ + + A V +MV+ G+ P+ +TYN L
Sbjct: 415 LFREMSQ-RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 473
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEG 219
+ G+ +A + +Q + + P+ T I++ G CK G
Sbjct: 474 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 1/240 (0%)
Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
++S K + + F +M+ L + NL +N LI F L M + G
Sbjct: 84 LLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLG 143
Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
+PD+VT +++++ + + + D MV+ G +PD F+ L G + +A
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203
Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
+++ M + G P++V + V++G C A+++ KM I N+ Y T++
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263
Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPN 450
+ + A L ME KGVRP T + G +A R+L E R+ PN
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE-RKINPN 322
>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1
Length = 952
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 205/413 (49%), Gaps = 42/413 (10%)
Query: 50 SLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY 109
+L+ ++E++G+ +++ M++ + + + + +F+++K+ G PT TY LI Y
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 494
Query: 110 GNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPD 169
VGK ++L++ ++M +++ VK N +TY++++ + A+ V MV G++PD
Sbjct: 495 TKVGKISKALEVSRVM-KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 553
Query: 170 AVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLY 229
+ YN + A+ G RA Q + EMQ + RP RT I+ GY K G+M ++
Sbjct: 554 VILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFD 613
Query: 230 RMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWS 286
M+ P + FN LI G ++ + ++KA+ +++E GV + T++ IM ++
Sbjct: 614 MMRRCGCVPTVHTFNGLINGLVEKRQ---MEKAVEILDEMTLAGVSANEHTYTKIMQGYA 670
Query: 287 SAGLMGKCQEIFDDMVKAGIEPDI-----------------------------------H 311
S G GK E F + G++ DI
Sbjct: 671 SVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 730
Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
V++IL G+ R G+ +A ++ M+K GV P++ +T+ IS A M RA E+M
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM 790
Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
+G+ PN+KTY TL+ G+ A P +A + M+ G++P K+ + S
Sbjct: 791 EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTS 843
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 198/388 (51%), Gaps = 7/388 (1%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+N+ GK +A + + EEG + L TY+ ++ + K + + ++ + K+GM
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
KPD IL+N +I+A GN+D A++ ++M+ +PTT T+ +I GY G SL+
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
+ +M + V P T+N L+ K +E+A ++ +M +G+ + TY + + Y
Sbjct: 611 VFDMMRRCGCV-PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 669
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
A G+T +A + +QN + + T ++ CK G M+ A+ M + N
Sbjct: 670 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 729
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
V+N LI G+ D + M++ GVKPD+ T+++ + A S AG M + + ++
Sbjct: 730 FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 789
Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
M G++P+I ++ L KG+ RA P+KA S M+ G+ P+ ++ +++ +
Sbjct: 790 MEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRAS 849
Query: 361 MQRA------MSIYEKMCEIGINPNLKT 382
+ A M+I ++M E G+ ++ T
Sbjct: 850 IAEAYIYSGVMTICKEMVEAGLIVDMGT 877
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 179/393 (45%), Gaps = 5/393 (1%)
Query: 21 IEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNV 80
E+ +P+ + +V R+ ++ G+ P S ++ ++I+A + ++
Sbjct: 301 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDM 360
Query: 81 DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP--NDRTY 138
DEA+ +KMK+ G + + TY+ ++ G+ G E + + K + N Y
Sbjct: 361 DEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFD---EAKRIHKTLNASIY 417
Query: 139 NILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQN 198
++ A C ++E A +V +M GI Y+T+ Y + + + ++
Sbjct: 418 GKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKE 477
Query: 199 NQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG 258
P T G +++ Y K G + A+ MKE V NL ++ +I GF+ +KD
Sbjct: 478 CGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWAN 537
Query: 259 VDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAK 318
M + G+KPDV+ ++ I+ A+ G M + + +M K P F +
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIH 597
Query: 319 GYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINP 378
GY ++G+ +++ + MR+ G P V F +I+G +M++A+ I ++M G++
Sbjct: 598 GYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA 657
Query: 379 NLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
N TY ++ GY +A E ++ +G+
Sbjct: 658 NEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 690
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 157/323 (48%), Gaps = 1/323 (0%)
Query: 96 KPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAW 155
KP+ + + ++K YG G + + + M + + + P R Y L+ A+ ++EA
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERM-RARGITPTSRIYTSLIHAYAVGRDMDEAL 364
Query: 156 NVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
+ V KM GI+ VTY+ + +++ G A+ E + N G I+ +
Sbjct: 365 SCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAH 424
Query: 216 CKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDV 275
C+ NME A + M+E + + ++++++ G+ + D ++E G P V
Sbjct: 425 CQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTV 484
Query: 276 VTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
VT+ +++ ++ G + K E+ M + G++ ++ +S++ G+V+ + A ++
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544
Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
M K G+ P+V+++ +IS +C M RA+ ++M ++ P +T+ ++ GY ++
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 396 PWRAEELLQVMEEKGVRPKKSTI 418
R+ E+ +M G P T
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTF 627
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 116/259 (44%)
Query: 155 WNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSG 214
W V +P + + + Y + G+ +RA + M+ + P R ++
Sbjct: 294 WQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHA 353
Query: 215 YCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPD 274
Y +M++A+ + +MKE + +LV ++ ++ GF ++ D + +
Sbjct: 354 YAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLN 413
Query: 275 VVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILT 334
+ I+ A M + + + +M + GI+ I ++ + GY + +K +
Sbjct: 414 ASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFK 473
Query: 335 SMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAK 394
+++ G P VV + +I+ + K+ +A+ + M E G+ NLKTY ++ G+ + K
Sbjct: 474 RLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLK 533
Query: 395 QPWRAEELLQVMEEKGVRP 413
A + + M ++G++P
Sbjct: 534 DWANAFAVFEDMVKEGMKP 552
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 110/268 (41%), Gaps = 41/268 (15%)
Query: 175 TLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKEL 234
+L R G+ ++A FE + +P+ G++V Y + G+M A RM+
Sbjct: 282 SLQRILDTNGDNWQAVISAFEKIS---KPSRTEFGLMVKFYGRRGDMHRARETFERMRAR 338
Query: 235 EVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKC 294
+ P ++ SLI + +D +D+AL+ + +
Sbjct: 339 GITPTSRIYTSLIHAYAVGRD---MDEALSCVRK-------------------------- 369
Query: 295 QEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISG 354
M + GIE + +S++ G+ +AG + A+ ++ N ++ +I
Sbjct: 370 ------MKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYA 423
Query: 355 WCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
C M+RA ++ +M E GI+ + Y T++ GY + + + ++E G P
Sbjct: 424 HCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPT 483
Query: 415 KSTIQLVADSWRAIG---LAREAKRVLK 439
T + + + +G A E RV+K
Sbjct: 484 VVTYGCLINLYTKVGKISKALEVSRVMK 511
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 78/172 (45%)
Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
KP F ++ + G M + +E F+ M GI P +++ L Y + +A S
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
+ M++ G+ ++V ++ ++ G+ A + A +++ I N Y +++ +
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEE 443
+ RAE L++ MEE+G+ + + D + + ++ V K +E
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKE 477
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 208/420 (49%), Gaps = 8/420 (1%)
Query: 8 GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
GK + F +I G RPT+ TY ++ + ++ ++ L +++ G+ PD++ +
Sbjct: 241 GKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY 300
Query: 68 NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
N+MI+ + G +D+ + F++MKD C+P TYN LI + GK L+ + M +
Sbjct: 301 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM-K 359
Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
+KPN +Y+ LV A+C + +++A M G+ P+ TY +L A + G
Sbjct: 360 GNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLS 419
Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
A ++ EM V N T ++ G C M++A +M V PNL +N+LI
Sbjct: 420 DAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI 479
Query: 248 KGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
GF+ K+ +D+AL L+ E G+KPD++ + T + S + + + ++M +
Sbjct: 480 HGFVKAKN---MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKEC 536
Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
GI+ + +++ L Y ++G P + +L M++ + VV F +I G C + +A
Sbjct: 537 GIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKA 596
Query: 365 MSIYEKMC-EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
+ + ++ + G+ N + ++ G + Q A L + M +KG+ P ++ + D
Sbjct: 597 VDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD 656
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 210/451 (46%), Gaps = 2/451 (0%)
Query: 27 PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
P + L + L + + SK+++ + P + N +++ ++ G D+ +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 87 FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
F+ M +G +PT TYN +I G E + L + M + + + P+ TYN ++ +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM-KFRGLVPDTVTYNSMIDGFG 308
Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
+++ +M +PD +TYN L + ++G+ + EM+ N ++PN
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368
Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
+ +V +CKEG M+ A++F M+ + + PN + SLI I + + M
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
+ GV+ +VVT++ ++D A M + +E+F M AG+ P++ ++ L G+V+A
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
+A +L ++ G+ P+++++ T I G C+ K++ A + +M E GI N Y TL
Sbjct: 489 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548
Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
+ Y ++ P LL M+E + T ++ D L +A D
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 608
Query: 447 SMPNKKDEIA-VESIHRKQNLSASNSTFLQI 476
N A ++ + + + A+ + F Q+
Sbjct: 609 LQANAAIFTAMIDGLCKDNQVEAATTLFEQM 639
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/494 (22%), Positives = 220/494 (44%), Gaps = 46/494 (9%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
++ + +G A +F + G P +TY +++ + R + +++
Sbjct: 269 IDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCC 328
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
+PD I +NA+IN + G + ++ +++MK +G KP +Y+TL+ + G ++++K
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 388
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
M + + PN+ TY L+ A C ++ +A+ + +M+ G++ + VTY L
Sbjct: 389 FYVDMRR-VGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 447
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
AE++ +M V PN + ++ G+ K NM+ A+ L +K + P+L
Sbjct: 448 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 507
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
+++ + I G ++ + + M+E G+K + + ++T+MDA+ +G + + D+
Sbjct: 508 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 567
Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSM-RKYGVHPNVVMFTTVISGWCNAV 359
M + IE + F +L G + KA + +G+ N +FT +I G C
Sbjct: 568 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 627
Query: 360 KMQRAMSIYE-----------------------------------KMCEIGINPNLKTYE 384
+++ A +++E KM EIG+ +L Y
Sbjct: 628 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 687
Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA--------KR 436
+L+WG Q +A L+ M +G+ P + V +G EA K
Sbjct: 688 SLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKH 747
Query: 437 VLKSAEEDRQSMPN 450
L +++ D ++PN
Sbjct: 748 QLLTSDND-NALPN 760
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/520 (25%), Positives = 247/520 (47%), Gaps = 27/520 (5%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
M++LV G +AH ++ + + G P + ++T + + + R + L L++ + G
Sbjct: 118 MSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGC 177
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
+ + + + ++ E E ++F KM SG ST+N L++ G +E K
Sbjct: 178 EMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEK 237
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
LL + + + V PN TYN+ ++ C + ++ A +V ++ G +PD +TYN L
Sbjct: 238 LLDKVIK-RGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGL 296
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
+ + AE L +M N + P+ T +++GYCK G ++ A R + P+
Sbjct: 297 CKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEI 297
+ SLI G +++ +AL L E G+KP+V+ ++T++ S+ G++ + ++
Sbjct: 357 FTYRSLIDGLCHEGETN---RALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQL 413
Query: 298 FDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
++M + G+ P++ F+IL G + G A+ ++ M G P++ F +I G+
Sbjct: 414 ANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 473
Query: 358 AVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKST 417
+KM+ A+ I + M + G++P++ TY +LL G + + E + M EKG P T
Sbjct: 474 QLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFT 533
Query: 418 IQLVADSW-------RAIGLAREAKRVLKSAEEDRQSMPNKKDEI-------AVESIHRK 463
++ +S A+GL E K KS D + D ++ RK
Sbjct: 534 FNILLESLCRYRKLDEALGLLEEMKN--KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591
Query: 464 Q----NLSASNSTFLQIPGVVSSEHNGSSAAKIRSQIVLR 499
+S+S T+ I + + N + A K+ ++V R
Sbjct: 592 MEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 196/450 (43%), Gaps = 43/450 (9%)
Query: 4 LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
L +G+ A + CLIE+G +P +ITY L+ L + +F+ + K+ +G++PD
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD 320
Query: 64 SILFN-----------------------------------AMINACSESGNVDEAMKIFQ 88
S +N ++I+ G + A+ +F
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN 380
Query: 89 KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
+ G KP YNTLIKG N G E+ +L MS+ K + P +T+NILV C
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE-KGLIPEVQTFNILVNGLCKM 439
Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
+ +A +V M++ G PD T+N L Y+ + A ++L M +N V P+ T
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTY 499
Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
+++G CK ED M M E PNL FN L++ + +D+AL L+EE
Sbjct: 500 NSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK---LDEALGLLEE 556
Query: 269 F---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA-GIEPDIHVFSILAKGYVRAG 324
V PD VTF T++D + G + +F M +A + ++I+ +
Sbjct: 557 MKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKL 616
Query: 325 EPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYE 384
AE + M + P+ + ++ G+C + +M E G P+L T
Sbjct: 617 NVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLG 676
Query: 385 TLLWGYGEAKQPWRAEELLQVMEEKGVRPK 414
++ + + A ++ M +KG+ P+
Sbjct: 677 RVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 200/461 (43%), Gaps = 37/461 (8%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+ +L KG E + + +I+ G P L TY + L ++ + ++ + + G
Sbjct: 223 LRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGP 282
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
KPD I +N +I ++ EA KM + G +P + TYNTLI GY G + + +
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAER 342
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
++ + V P+ TY L+ C + A + + + GI+P+ + YNTL +
Sbjct: 343 IVGDAVFNGFV-PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
+ G A Q+ EM + P +T I+V+G CK G + DA + M P++
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
FN LI G+ + + L +M + GV PDV T++++++ E +
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
MV+ G P++ F+IL + R + +A +L M+ V+P+ V F T+I G+C
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 361 MQRAMSIYEKMCE-IGINPNLKTYETLLWGYGEAKQPWRAEELLQVM------------- 406
+ A +++ KM E ++ + TY ++ + E AE+L Q M
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 407 ----------------------EEKGVRPKKSTIQLVADSW 425
E G P +T+ V +
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL 682
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 215/435 (49%), Gaps = 9/435 (2%)
Query: 10 PHEAHYIFNCLIEE-GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKD--GMKPDSIL 66
P +A +FN + +E G + TL TY +++ L +F+++ ++ + ++ + +
Sbjct: 20 PMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVY 79
Query: 67 FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
AM N G V EA+ +F++M C+PT +YN ++ + G +++ K+ M
Sbjct: 80 VGAMKNY-GRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM- 137
Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
+D+ + P+ ++ I ++++C + A ++ M + G + + V Y T+ + Y E
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGF--YEEN 195
Query: 187 YRAE--QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
++AE ++ +M + V T ++ CK+G++++ + L ++ + V PNL +N
Sbjct: 196 FKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYN 255
Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
I+G + DG + + + E G KPDV+T++ ++ + + MV
Sbjct: 256 LFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE 315
Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
G+EPD + ++ L GY + G Q AE I+ G P+ + ++I G C+ + RA
Sbjct: 316 GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRA 375
Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
++++ + GI PN+ Y TL+ G A +L M EKG+ P+ T ++ +
Sbjct: 376 LALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNG 435
Query: 425 WRAIGLAREAKRVLK 439
+G +A ++K
Sbjct: 436 LCKMGCVSDADGLVK 450
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 186/385 (48%), Gaps = 1/385 (0%)
Query: 41 RQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTS 100
R+ + + +++ +++ +P +NA+++ +SG D+A K++ +M+D G P
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
++ +K + +P +L+LL MS + + N Y +V + +N E + + K
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSS-QGCEMNVVAYCTVVGGFYEENFKAEGYELFGK 206
Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
M+ASG+ T+N L R + G+ E++L ++ V PN T + + G C+ G
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE 266
Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
++ A+R + + E P+++ +N+LI G + L M G++PD T++T
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326
Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
++ + G++ + I D V G PD + L G GE +A ++ G
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG 386
Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
+ PNV+++ T+I G N + A + +M E G+ P ++T+ L+ G + A+
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446
Query: 401 ELLQVMEEKGVRPKKSTIQLVADSW 425
L++VM KG P T ++ +
Sbjct: 447 GLVKVMISKGYFPDIFTFNILIHGY 471
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 110/233 (47%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K A I + +++ G P + TY +L+ L + +F+ ++ + + G P+ FN
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
++ + +DEA+ + ++MK+ P T+ TLI G+ G + + L + M +
Sbjct: 536 ILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEA 595
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
V + TYNI++ A+ K ++ A + +MV + PD TY + + + G
Sbjct: 596 YKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNL 655
Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLV 241
+ L EM N P+ T G +++ C E + +A ++RM + + P V
Sbjct: 656 GYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 154/361 (42%), Gaps = 36/361 (9%)
Query: 82 EAMKIFQKM-KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
+A+++F M K+ G K T STY ++I+ G GK E ++L M ++ + Y
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81
Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
++ + K ++EA NV +M +P +YN +
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSV--------------------- 120
Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
++ SGY + A + RM++ + P++ F +K F
Sbjct: 121 ---------LVDSGY-----FDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAAL 166
Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
+ L M G + +VV + T++ + + E+F M+ +G+ + F+ L +
Sbjct: 167 RLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVL 226
Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
+ G+ ++ E +L + K GV PN+ + I G C ++ A+ + + E G P++
Sbjct: 227 CKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDV 286
Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKS 440
TY L++G + + AE L M +G+ P T + + G+ + A+R++
Sbjct: 287 ITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD 346
Query: 441 A 441
A
Sbjct: 347 A 347
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 202/409 (49%), Gaps = 1/409 (0%)
Query: 26 RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMK 85
+P ++TY TLV L + + F+ L ++ ++ P ++++ + G ++EA+
Sbjct: 294 KPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALN 353
Query: 86 IFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAW 145
+ +++ D G P YN LI K E+ L M + ++PND TY+IL+ +
Sbjct: 354 LVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK-IGLRPNDVTYSILIDMF 412
Query: 146 CSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNE 205
C + ++ A + + +MV +G++ YN+L + ++G+ AE + EM N ++ P
Sbjct: 413 CRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTV 472
Query: 206 RTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTL 265
T ++ GYC +G + A+R + M + P++ F +L+ G K
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE 532
Query: 266 MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGE 325
M E+ VKP+ VT++ +++ + G M K E +M + GI PD + + L G G+
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ 592
Query: 326 PQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYET 385
+A+ + + K N + +T ++ G+C K++ A+S+ ++M + G++ +L Y
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 652
Query: 386 LLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
L+ G + K LL+ M ++G++P + D+ G +EA
Sbjct: 653 LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA 701
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 198/423 (46%), Gaps = 6/423 (1%)
Query: 13 AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
A +FN ++ G RP + YT ++ +L K +I+ +E G + + +N +I+
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 73 ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
+ V EA+ I + + KP TY TL+ G V + E L+++ M +
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLR-FS 329
Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
P++ + LV + IEEA N+V ++V G+ P+ YN L + + + + AE +
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
M +RPN+ T I++ +C+ G ++ A+ FL M + + ++ +NSLI G
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449
Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
D + + M ++P VVT++++M + S G + K ++ +M GI P I+
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509
Query: 313 FSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMC 372
F+ L G RAG + A + M ++ V PN V + +I G+C M +A ++M
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 373 EIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAR 432
E GI P+ +Y L+ G Q A+ + G+ + + + G R
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD-----GLHKGNCELNEICYTGLLHGFCR 624
Query: 433 EAK 435
E K
Sbjct: 625 EGK 627
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 204/442 (46%), Gaps = 40/442 (9%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K HEA +F+ + + G RP +TY+ L+ R+ + + LS + ++ G+K +N
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441
Query: 69 AMINA------------------------------------CSESGNVDEAMKIFQKMKD 92
++IN CS+ G +++A++++ +M
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK-GKINKALRLYHEMTG 500
Query: 93 SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIE 152
G P+ T+ TL+ G G +++KL M++ NVKPN TYN+++ +C + +
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE-WNVKPNRVTYNVMIEGYCEEGDMS 559
Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
+A+ + +M GI PD +Y L G+ A+ + + NE ++
Sbjct: 560 KAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLL 619
Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVK 272
G+C+EG +E+A+ M + V +LV + LI G L KD L M + G+K
Sbjct: 620 HGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLK 679
Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
PD V +++++DA S G + I+D M+ G P+ ++ + G +AG +AE +
Sbjct: 680 PDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVL 739
Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNA-VKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
+ M+ PN V + + V MQ+A+ ++ + + G+ N TY L+ G+
Sbjct: 740 CSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFC 798
Query: 392 EAKQPWRAEELLQVMEEKGVRP 413
+ A EL+ M GV P
Sbjct: 799 RQGRIEEASELITRMIGDGVSP 820
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 193/417 (46%), Gaps = 1/417 (0%)
Query: 7 KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
+GK EA + +++ G P L Y L+ +L + ++F L ++ K G++P+ +
Sbjct: 345 RGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVT 404
Query: 67 FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
++ +I+ G +D A+ +M D+G K + YN+LI G+ G + + M
Sbjct: 405 YSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMI 464
Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
+K ++P TY L+ +CSK I +A + ++M GI P T+ TL + G
Sbjct: 465 -NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523
Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
A ++ EM V+PN T +++ GYC+EG+M A FL M E + P+ + L
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583
Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
I G + + + + + + + ++ ++ + G + + + +MV+ G+
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMS 366
+ D+ + +L G ++ + + +L M G+ P+ V++T++I + A
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703
Query: 367 IYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
I++ M G PN TY ++ G +A AE L M+ P + T D
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD 760
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 202/439 (46%), Gaps = 8/439 (1%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKR-FKSILSLISKVEKDGMKPDSILF 67
KP + + E+ + ++ L+ R +R +L + K + P+
Sbjct: 136 KPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTL 195
Query: 68 NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQL 124
+A+++ + + AM++F M G +P Y +I+ ++ + +E + ++
Sbjct: 196 SALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEA 255
Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
D N+ P YN+L+ C K + EA + + ++PD VTY TL +
Sbjct: 256 TGCDVNIVP----YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ 311
Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
E +M+ EM + P+E +V G K G +E+A+ + R+ + V PNL V+N
Sbjct: 312 EFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYN 371
Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
+LI + + M + G++P+ VT+S ++D + G + +MV
Sbjct: 372 ALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDT 431
Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
G++ ++ ++ L G+ + G+ AE + M + P VV +T+++ G+C+ K+ +A
Sbjct: 432 GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKA 491
Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
+ +Y +M GI P++ T+ TLL G A A +L M E V+P + T ++ +
Sbjct: 492 LRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEG 551
Query: 425 WRAIGLAREAKRVLKSAEE 443
+ G +A LK E
Sbjct: 552 YCEEGDMSKAFEFLKEMTE 570
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 197/425 (46%), Gaps = 2/425 (0%)
Query: 27 PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
P+ ++LV L ++ + + L+L+ +V G+ P+ ++NA+I++ + EA +
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 87 FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
F +M G +P TY+ LI + GK + +L L M D +K + YN L+ C
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV-DTGLKLSVYPYNSLINGHC 448
Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
I A + +M+ ++P VTY +L Y G+ +A ++ EM + P+
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508
Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
T ++SG + G + DA++ M E V PN V +N +I+G+ + D + L M
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
E G+ PD ++ ++ G + + D + K E + ++ L G+ R G+
Sbjct: 569 TEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628
Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
++A S+ M + GV ++V + +I G + + ++M + G+ P+ Y ++
Sbjct: 629 EEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSM 688
Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
+ + A + +M +G P + T V + G EA+ VL S +
Sbjct: 689 IDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE-VLCSKMQPVS 747
Query: 447 SMPNK 451
S+PN+
Sbjct: 748 SVPNQ 752
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 117/267 (43%), Gaps = 34/267 (12%)
Query: 7 KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
+GK EA + +++ G L+ Y L+ + K K L+ ++ G+KPD ++
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684
Query: 67 FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVG------------K 114
+ +MI+A S++G+ EA I+ M + GC P TY +I G G +
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Query: 115 PEESLK-------LLQLMSQD---------------KNVKPNDRTYNILVRAWCSKNSIE 152
P S+ L ++++ K + N TYN+L+R +C + IE
Sbjct: 745 PVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIE 804
Query: 153 EAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIV 212
EA ++ +M+ G+ PD +TY T+ + + +A ++ M +RP+ ++
Sbjct: 805 EASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLI 864
Query: 213 SGYCKEGNMEDAMRFLYRMKELEVHPN 239
G C G M A M + PN
Sbjct: 865 HGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 84/203 (41%), Gaps = 36/203 (17%)
Query: 8 GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTR----------------------QKRF 45
G EA I++ +I EG P +TYT ++ L + Q +
Sbjct: 696 GDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755
Query: 46 KSILSLISKVEKD-------------GMKPDSILFNAMINACSESGNVDEAMKIFQKMKD 92
L +++K E D G+ ++ +N +I G ++EA ++ +M
Sbjct: 756 GCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIG 815
Query: 93 SGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIE 152
G P TY T+I +++++L M++ K ++P+ YN L+ C +
Sbjct: 816 DGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE-KGIRPDRVAYNTLIHGCCVAGEMG 874
Query: 153 EAWNVVYKMVASGIQPDAVTYNT 175
+A + +M+ G+ P+ T T
Sbjct: 875 KATELRNEMLRQGLIPNNKTSRT 897
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%)
Query: 7 KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
+G+ EA + +I +G P ITYTT++ L R+ K + L + + + G++PD +
Sbjct: 800 QGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVA 859
Query: 67 FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNT 104
+N +I+ C +G + +A ++ +M G P T T
Sbjct: 860 YNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 182 bits (461), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 212/407 (52%), Gaps = 12/407 (2%)
Query: 24 GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
G++ + ++ L+ AL ++ R + + ++ + ++P+ FN +INA ++G +++A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 84 MKIFQKMKDSGCKPTTSTYNTLIKGY---GNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
+ + MK GC P +YNTLI GY G GK ++ +L+ M ++ +V PN T+NI
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEN-DVSPNLTTFNI 301
Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
L+ + +++ + V +M+ ++P+ ++YN+L G+ A M +M +
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361
Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
V+PN T +++G+CK +++A+ +K P ++N LI + + +D
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK---ID 418
Query: 261 KALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
L EE G+ PDV T++ ++ G + +++FD + G+ PD+ F IL
Sbjct: 419 DGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILM 477
Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM-CEIGI 376
+GY R GE +KA +L M K G+ P + + V+ G+C ++ A ++ +M E +
Sbjct: 478 EGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRL 537
Query: 377 NPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
N+ +Y LL GY + + A LL M EKG+ P + T ++V +
Sbjct: 538 RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKE 584
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 173/324 (53%), Gaps = 10/324 (3%)
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG---E 185
+ ++PN T+N+++ A C + +A +V+ M G P+ V+YNTL Y + G +
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGK 276
Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
Y+A+ +L EM N V PN T I++ G+ K+ N+ +M+ M + +V PN++ +NS
Sbjct: 277 MYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNS 336
Query: 246 LIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
LI G + + +A+++ ++ GV+P+++T++ +++ + ++ + ++F +
Sbjct: 337 LINGLCN---GGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 303 KAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQ 362
G P ++++L Y + G+ ++ M + G+ P+V + +I+G C ++
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453
Query: 363 RAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVA 422
A +++++ G+ P+L T+ L+ GY + +A LL+ M + G++P+ T +V
Sbjct: 454 AAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVM 512
Query: 423 DSWRAIGLAREAKRVLKSAEEDRQ 446
+ G + A + E++R+
Sbjct: 513 KGYCKEGNLKAATNMRTQMEKERR 536
Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 158/306 (51%), Gaps = 21/306 (6%)
Query: 16 IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
+F ++++ +P +I+Y +L+ L + +S+ K+ G++P+ I +NA+IN
Sbjct: 318 VFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFC 377
Query: 76 ESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPND 135
++ + EA+ +F +K G PTT YN LI Y +GK ++ L + M ++ + P+
Sbjct: 378 KNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMERE-GIVPDV 436
Query: 136 RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFE 195
TYN L+ C +IE A + ++ + G+ PD VT++ L Y + GE+ +A +L E
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKE 495
Query: 196 MQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM-KELEVHPNLVVFNSLIKGFLDIK 254
M ++P T I++ GYCKEGN++ A +M KE + N+ +N L++G+
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555
Query: 255 DSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI--HV 312
+ + L M E G+ P+ +T+ + ++MV G PDI H+
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITYEIVK----------------EEMVDQGFVPDIEGHL 599
Query: 313 FSILAK 318
F++ K
Sbjct: 600 FNVSTK 605
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 175/356 (49%), Gaps = 8/356 (2%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTR----QKRFKSILSLISKVE 56
+N L GK ++A + + G P +++Y TL+ + K +K+ L VE
Sbjct: 230 INALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVE 289
Query: 57 KDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPE 116
D + P+ FN +I+ + N+ +MK+F++M D KP +YN+LI G N GK
Sbjct: 290 ND-VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKIS 348
Query: 117 ESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTL 176
E++ + M V+PN TYN L+ +C + ++EA ++ + G P YN L
Sbjct: 349 EAISMRDKMVS-AGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNML 407
Query: 177 ARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEV 236
AY + G+ + EM+ + P+ T +++G C+ GN+E A + ++ +
Sbjct: 408 IDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Query: 237 HPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQE 296
P+LV F+ L++G+ +S L M + G+KP +T++ +M + G +
Sbjct: 468 -PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATN 526
Query: 297 IFDDMVKA-GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
+ M K + ++ +++L +GY + G+ + A +L M + G+ PN + + V
Sbjct: 527 MRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 154/322 (47%), Gaps = 3/322 (0%)
Query: 4 LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
L G GK ++A + ++E P L T+ L+ + + + ++ +KP+
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330
Query: 64 SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
I +N++IN G + EA+ + KM +G +P TYN LI G+ +E+L +
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
+ V P R YN+L+ A+C I++ + + +M GI PD TYN L +
Sbjct: 391 SVKGQGAV-PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
G A + LF+ ++ P+ T I++ GYC++G A L M ++ + P + +
Sbjct: 450 GNI-EAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTY 508
Query: 244 NSLIKGFLDIKDSDGVDKALTLME-EFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMV 302
N ++KG+ + T ME E ++ +V +++ ++ +S G + + ++M+
Sbjct: 509 NIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568
Query: 303 KAGIEPDIHVFSILAKGYVRAG 324
+ G+ P+ + I+ + V G
Sbjct: 569 EKGLVPNRITYEIVKEEMVDQG 590
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 148/302 (49%), Gaps = 4/302 (1%)
Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
L+ A +N + V +M+ IQP+ T+N + A + G+ +A ++ +M+
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 201 VRPNERTCGIIVSGYCK---EGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSD 257
PN + ++ GYCK G M A L M E +V PNL FN LI GF +
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 258 GVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILA 317
G K M + VKP+V++++++++ + G + + + D MV AG++P++ ++ L
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 318 KGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGIN 377
G+ + ++A + S++ G P M+ +I +C K+ ++ E+M GI
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 378 PNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437
P++ TY L+ G A++L + KG+ P T ++ + + G +R+A +
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAML 492
Query: 438 LK 439
LK
Sbjct: 493 LK 494
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 148/322 (45%), Gaps = 5/322 (1%)
Query: 100 STYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVY 159
S + + G+ G + + +S NV N ++LV A+ + + E +
Sbjct: 118 SKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFK 177
Query: 160 KMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEG 219
+ G + A++ L A + + E + EM +++PN T ++++ CK G
Sbjct: 178 RSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTG 237
Query: 220 NMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVV 276
M A + MK PN+V +N+LI G+ + + + KA +++E V P++
Sbjct: 238 KMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLT 297
Query: 277 TFSTIMDA-WSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTS 335
TF+ ++D W L G ++F +M+ ++P++ ++ L G G+ +A S+
Sbjct: 298 TFNILIDGFWKDDNLPGS-MKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDK 356
Query: 336 MRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQ 395
M GV PN++ + +I+G+C ++ A+ ++ + G P + Y L+ Y + +
Sbjct: 357 MVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK 416
Query: 396 PWRAEELLQVMEEKGVRPKKST 417
L + ME +G+ P T
Sbjct: 417 IDDGFALKEEMEREGIVPDVGT 438
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 200/414 (48%), Gaps = 7/414 (1%)
Query: 24 GHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEA 83
G +P + YT + L R + + + ++K G+ P+ ++AMI+ ++GNV +A
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 84 MKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVR 143
+++++ + P + TL+ G+ + + L M + V PN YN L+
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVK-FGVDPNLYVYNCLIH 347
Query: 144 AWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRP 203
C ++ EA ++ +M + + PD TY L + A ++ +M+N ++ P
Sbjct: 348 GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP 407
Query: 204 NERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKAL 263
+ T ++ GYCKE NME A+ M V PN++ F++LI G+ +++D + A+
Sbjct: 408 SSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRD---IKAAM 464
Query: 264 TLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
L E G+ PDVVT++ ++DA M + ++ DM++AGI P+ H F+ L G+
Sbjct: 465 GLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGF 524
Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
+ G A + N V FT +I G C + RA + M GI P++
Sbjct: 525 WKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDI 584
Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
+Y ++L G+ + K+ L M + G+ P QL+A ++A G + A
Sbjct: 585 CSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 171/358 (47%), Gaps = 3/358 (0%)
Query: 34 TLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDS 93
+++ L R++RF S+ + G+ PD ++ + C + G + K+ +M
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSL 228
Query: 94 GCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEE 153
G KP Y I K EE+ K+ +LM + V PN TY+ ++ +C ++ +
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKK-HGVLPNLYTYSAMIDGYCKTGNVRQ 287
Query: 154 AWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVS 213
A+ + +++ + + P+ V + TL + + E A + M V PN ++
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH 347
Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDG-VDKALTLMEEFGVK 272
G+CK GNM +A+ L M+ L + P++ + LI G L I+D ++ M+ +
Sbjct: 348 GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILING-LCIEDQVAEANRLFQKMKNERIF 406
Query: 273 PDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESI 332
P T+++++ + M + ++ +M +G+EP+I FS L GY + + A +
Sbjct: 407 PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGL 466
Query: 333 LTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
M G+ P+VV +T +I M+ A+ +Y M E GI+PN T+ L+ G+
Sbjct: 467 YFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGF 524
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 180/415 (43%), Gaps = 7/415 (1%)
Query: 13 AHYIFNCLIEEGHRP--TLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAM 70
+H +FN L E+ P ++ ++ L+ F+ L + +++ PDS ++
Sbjct: 115 SHRLFNAL-EDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSI 170
Query: 71 INACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKN 130
+N D +Q M G P Y L + G + KLL M+
Sbjct: 171 LNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTS-LG 229
Query: 131 VKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAE 190
+KPN Y I + C N +EEA + M G+ P+ TY+ + Y + G +A
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY 289
Query: 191 QMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGF 250
+ E+ ++ PN G +V G+CK + A M + V PNL V+N LI G
Sbjct: 290 GLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGH 349
Query: 251 LDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
+ L+ ME + PDV T++ +++ + + +F M I P
Sbjct: 350 CKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSS 409
Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
++ L GY + ++A + + M GV PN++ F+T+I G+CN ++ AM +Y +
Sbjct: 410 ATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFE 469
Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
M GI P++ TY L+ + + A L M E G+ P T + D +
Sbjct: 470 MTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGF 524
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 152/325 (46%), Gaps = 1/325 (0%)
Query: 13 AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
A +F +++ G P L Y L+ + + L+S++E + PD + +IN
Sbjct: 323 ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382
Query: 73 ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVK 132
V EA ++FQKMK+ P+++TYN+LI GY E++L L M+ V+
Sbjct: 383 GLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTAS-GVE 441
Query: 133 PNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQM 192
PN T++ L+ +C+ I+ A + ++M GI PD VTY L A+ + A ++
Sbjct: 442 PNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRL 501
Query: 193 LFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLD 252
+M + PN+ T +V G+ KEG + A+ F + N V F LI+G
Sbjct: 502 YSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQ 561
Query: 253 IKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHV 312
+ + M G+ PD+ ++ +++ + + DM+K GI P++ V
Sbjct: 562 NGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLV 621
Query: 313 FSILAKGYVRAGEPQKAESILTSMR 337
+LA+ Y G + A + S R
Sbjct: 622 NQLLARFYQANGYVKSACFLTNSSR 646
Score = 132 bits (331), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 169/372 (45%), Gaps = 4/372 (1%)
Query: 66 LFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLM 125
+F+ +I E G +EA+ + ++MK C P + +++ G + + QLM
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDYQLM 190
Query: 126 SQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGE 185
+ + P+ Y +L + + + ++ +M + GI+P+ Y + +
Sbjct: 191 IS-RGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 186 TYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNS 245
AE+M M+ + V PN T ++ GYCK GN+ A + E+ PN+VVF +
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 246 LIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
L+ GF ++ M +FGV P++ ++ ++ +G M + + +M
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAM 365
+ PD+ ++IL G + +A + M+ + P+ + ++I G+C M++A+
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429
Query: 366 SIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSW 425
+ +M G+ PN+ T+ TL+ GY + A L M KG+ P T + D+
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489
Query: 426 RAIGLAREAKRV 437
+EA R+
Sbjct: 490 FKEANMKEALRL 501
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 158/354 (44%), Gaps = 28/354 (7%)
Query: 116 EESLKLLQLMSQDKNVKPND-RTYNILVR----------AWCSKNSI-------EEAWNV 157
EE+ KL + S+ + K ND ++++ ++ A C S+ E N+
Sbjct: 55 EEAFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNM 114
Query: 158 VYKMVAS--GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGY 215
+++ + IQ + + ++ E E+ L+ + + P+ + C I++G
Sbjct: 115 SHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCSPDSKACLSILNGL 174
Query: 216 CKEGNME----DAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGV 271
+ + D + R +VH V+F K L K +K L M G+
Sbjct: 175 VRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKK----EKLLDEMTSLGI 230
Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
KP+V ++ + M + +++F+ M K G+ P+++ +S + GY + G ++A
Sbjct: 231 KPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYG 290
Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
+ + + PNVV+F T++ G+C A ++ A S++ M + G++PNL Y L+ G+
Sbjct: 291 LYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHC 350
Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDR 445
++ A LL ME + P T ++ + EA R+ + + +R
Sbjct: 351 KSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER 404
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 218/444 (49%), Gaps = 3/444 (0%)
Query: 9 KPHEAHYIFNCLIEEGH-RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
K ++A +F C + E H P+++ ++ L+ A+ + ++++++SL +E G+ D F
Sbjct: 59 KFNDALTLF-CDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSF 117
Query: 68 NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
+I+ + A+ KM G +P+ T+ +L+ G+ +V + E++ L+ +
Sbjct: 118 TTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV- 176
Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
+PN YN ++ + C K + A +V+ M GI+PD VTYN+L G
Sbjct: 177 GLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWG 236
Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
+ ++L +M + P+ T ++ Y KEG + +A + M + V+PN+V +NSLI
Sbjct: 237 VSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLI 296
Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
G D K L ++ G P+ VT++T+++ + A + +I M + G++
Sbjct: 297 NGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVD 356
Query: 308 PDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSI 367
D ++ L +GY +AG+ AE +L M GVHP++ F ++ G C+ K+ +A+
Sbjct: 357 GDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVR 416
Query: 368 YEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRA 427
E + + + TY ++ G +A + A L + KGV P T + R
Sbjct: 417 LEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRR 476
Query: 428 IGLAREAKRVLKSAEEDRQSMPNK 451
L REA + + +++ MP K
Sbjct: 477 KRLWREAHELYRKMQKEDGLMPIK 500
Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 152/309 (49%), Gaps = 8/309 (2%)
Query: 4 LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
L KG+ + A + + + G RP ++TY +L+ L + ++S + + G+ PD
Sbjct: 194 LCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPD 253
Query: 64 SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
I F+A+I+ + G + EA K + +M P TYN+LI G G +E+ K+L
Sbjct: 254 VITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLN 313
Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
++ K PN TYN L+ +C +++ ++ M G+ D TYNTL + Y Q
Sbjct: 314 VLVS-KGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQA 372
Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
G+ AE++L M + V P+ T I++ G C G + A+ L +++ + ++ +
Sbjct: 373 GKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITY 432
Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEF---GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
N +IKG +D V+ A L GV PDV+T+ T+M L + E++
Sbjct: 433 NIIIKGLC---KADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRK 489
Query: 301 MVKA-GIEP 308
M K G+ P
Sbjct: 490 MQKEDGLMP 498
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 7/197 (3%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+N L G EA + N L+ +G P +TY TL+ + KR + ++ + +DG+
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
D+ +N + ++G A K+ +M G P T+N L+ G + GK ++L
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALV 415
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLA--- 177
L+ + + K V TYNI+++ C + +E+AW + + G+ PD +TY T+
Sbjct: 416 RLEDLQKSKTV-VGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGL 474
Query: 178 ---RAYAQYGETYRAEQ 191
R + + E YR Q
Sbjct: 475 RRKRLWREAHELYRKMQ 491
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 178 bits (452), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 183/360 (50%), Gaps = 1/360 (0%)
Query: 20 LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
+I+ GH P+++T+ +L+ R R L + ++ G KP+ +++N +I+ +S
Sbjct: 142 MIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201
Query: 80 VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
VD A+ + +M+ G P TYN+LI G + G+ ++ +++ M++ + + P+ T+N
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK-REIYPDVFTFN 260
Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
L+ A + + EA +M+ + PD VTY+ L Y AE+M M +
Sbjct: 261 ALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK 320
Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
P+ T I+++GYCK +E M+ M + V N V + LI+G+ +
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVA 380
Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
++ M GV P+++T++ ++ G + K I DM K G++ DI ++I+ +G
Sbjct: 381 EEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRG 440
Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
+AGE A I S+ G+ P++ +TT++ G + A +++ KM E GI PN
Sbjct: 441 MCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 186/390 (47%), Gaps = 1/390 (0%)
Query: 29 LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQ 88
L T L+ R + LS + K+ K G +P + F +++N V +A+ +F
Sbjct: 116 LCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFD 175
Query: 89 KMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSK 148
+M G KP YNT+I G + + +L LL M +D + P+ TYN L+ CS
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD-GIGPDVVTYNSLISGLCSS 234
Query: 149 NSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTC 208
+A +V M I PD T+N L A + G AE+ EM + P+ T
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294
Query: 209 GIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEE 268
+++ G C +++A M P++V ++ LI G+ K + K M +
Sbjct: 295 SLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354
Query: 269 FGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
GV + VT++ ++ + AG + +EIF MV G+ P+I +++L G G+ +K
Sbjct: 355 RGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEK 414
Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
A IL M+K G+ ++V + +I G C A ++ A IY + G+ P++ TY T++
Sbjct: 415 ALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMML 474
Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTI 418
G + A+ L + M+E G+ P + +
Sbjct: 475 GLYKKGLRREADALFRKMKEDGILPNECYV 504
Score = 176 bits (446), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 208/425 (48%), Gaps = 2/425 (0%)
Query: 27 PTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKI 86
P++ ++ L++A+++ K++ ++ L +++ G+ + N ++N + A+
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 87 FQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWC 146
KM G +P+ T+ +L+ G+ + ++L + M KPN YN ++ C
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV-GMGYKPNVVIYNTIIDGLC 197
Query: 147 SKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNER 206
++ A +++ +M GI PD VTYN+L G A +M+ M ++ P+
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 207 TCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLM 266
T ++ KEG + +A F M + P++V ++ LI G D ++ M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 267 EEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEP 326
G PDVVT+S +++ + + + ++F +M + G+ + ++IL +GY RAG+
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377
Query: 327 QKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETL 386
AE I M GVHPN++ + ++ G C+ K+++A+ I M + G++ ++ TY +
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNII 437
Query: 387 LWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQ 446
+ G +A + A ++ + +G+ P T + GL REA + + +ED
Sbjct: 438 IRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKED-G 496
Query: 447 SMPNK 451
+PN+
Sbjct: 497 ILPNE 501
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 181/339 (53%), Gaps = 7/339 (2%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
+ ++A Y+F+ ++ G++P ++ Y T++ L + K+ + L L++++EKDG+ PD + +N
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
++I+ SG +A ++ M P T+N LI G+ E+ + + M +
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR- 284
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYR 188
+++ P+ TY++L+ C + ++EA + MV+ G PD VTY+ L Y + +
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 189 AEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIK 248
++ EM V N T I++ GYC+ G + A RM VHPN++ +N L+
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 249 GFLDIKDSDGVDKALTL---MEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAG 305
G + D+ ++KAL + M++ G+ D+VT++ I+ AG + +I+ + G
Sbjct: 405 G---LCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 306 IEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPN 344
+ PDI ++ + G + G ++A+++ M++ G+ PN
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 172/342 (50%), Gaps = 1/342 (0%)
Query: 80 VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
+D+++ +F M P+ + ++ L+ + K + + L + M Q + N T N
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM-QMLGIPHNLCTCN 120
Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
IL+ +C + + A + + KM+ G +P VT+ +L + + Y A M +M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
+PN I+ G CK +++A+ L RM++ + P++V +NSLI G
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
+ ++ M + + PDV TF+ ++DA G + + +E +++M++ ++PDI +S+L G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
+AE + M G P+VV ++ +I+G+C + K++ M ++ +M + G+ N
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 380 LKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
TY L+ GY A + AEE+ + M GV P T ++
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVL 402
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 1/235 (0%)
Query: 5 VGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDS 64
V +G+ EA + +I P ++TY+ L+ L R + + G PD
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326
Query: 65 ILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQL 124
+ ++ +IN +S V+ MK+F +M G T TY LI+GY GK + ++ +
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Query: 125 MSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
M V PN TYN+L+ C IE+A ++ M +G+ D VTYN + R + G
Sbjct: 387 MVF-CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAG 445
Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPN 239
E A + + + P+ T ++ G K+G +A +MKE + PN
Sbjct: 446 EVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%)
Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFST 280
++D++ + M + P++ F+ L+ +K D V M+ G+ ++ T +
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 281 IMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYG 340
+++ + + M+K G EP I F L G+ R A + M G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 341 VHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAE 400
PNVV++ T+I G C + ++ A+ + +M + GI P++ TY +L+ G + + A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 401 ELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAK 435
++ M ++ + P T + D+ G EA+
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Query: 8 GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
GK + A IF ++ G P +ITY L+ L + + L +++ ++K+GM D + +
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Query: 68 NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
N +I ++G V +A I+ + G P TY T++ G G E+ L + M +
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494
Query: 128 DKNVKPND 135
D + PN+
Sbjct: 495 D-GILPNE 501
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 194/368 (52%), Gaps = 1/368 (0%)
Query: 20 LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
+++ G RP+++T +L+ + RF+ +SL+ ++ G P+ +++N +IN ++ +
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 80 VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
++ A+++F M+ G + TYNTLI G N G+ ++ +LL+ M + K + PN +
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK-IDPNVIFFT 258
Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
L+ + + ++ EA N+ +M+ + P+ TYN+L + +G A+ M M +
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
P+ T +++G+CK +ED M+ M + + +N+LI G+ +
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378
Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
K M + GV PD+VT++ ++D + G + K + +D+ K+ ++ DI ++I+ +G
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
Query: 320 YVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPN 379
R + ++A + S+ + GV P+ + + T+ISG C + A + +M E G P+
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
Query: 380 LKTYETLL 387
+ Y+ L
Sbjct: 499 ERIYDETL 506
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 196/442 (44%), Gaps = 36/442 (8%)
Query: 9 KPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFN 68
K +A +F +++ P+++ +T ++ + + +F ++ L K+E G+ D F
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 69 AMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 128
+I+ + A+ + KM G +P+ T +L+ G+ + +E++ L+ M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG---- 184
V PN YN ++ C + A V Y M GI+ DAVTYNTL + G
Sbjct: 179 GFV-PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 185 ------------------------ETYRAEQMLFEMQN-------NQVRPNERTCGIIVS 213
+T+ E L E +N V PN T +++
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 214 GYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
G+C G + DA M P++V +N+LI GF K + K M G+
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 274 DVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESIL 333
D T++T++ + AG + Q++F+ MV G+ PDI ++IL G+ +KA ++
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417
Query: 334 TSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEA 393
++K + +++ + +I G C K++ A ++ + G+ P+ Y T++ G
Sbjct: 418 EDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 477
Query: 394 KQPWRAEELLQVMEEKGVRPKK 415
A++L + M+E G P +
Sbjct: 478 GLQREADKLCRRMKEDGFMPSE 499
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 165/343 (48%), Gaps = 1/343 (0%)
Query: 81 DEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNI 140
D+A +F +M S P+ + ++ + K + + L M ++ + + ++ I
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKM-ENLGISHDLYSFTI 119
Query: 141 LVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQ 200
L+ +C + + A ++ KM+ G +P VT +L + Q A ++ M
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 201 VRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVD 260
PN +++G CK ++ +A+ Y M++ + + V +N+LI G +
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 261 KALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGY 320
+ L M + + P+V+ F+ ++D + G + + + ++ +M++ + P++ ++ L G+
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 321 VRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNL 380
G A+ + M G P+VV + T+I+G+C + +++ M ++ +M G+ +
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 381 KTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVAD 423
TY TL+ GY +A + A+++ M + GV P T ++ D
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLD 402
Score = 115 bits (288), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 107/195 (54%), Gaps = 1/195 (0%)
Query: 12 EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
+A Y+F+ ++ +G P ++TY TL+ + KR + + L ++ G+ D+ +N +I
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 72 NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
+ ++G ++ A K+F +M D G P TYN L+ N GK E++L +++ + Q +
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL-QKSEM 425
Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
+ TYNI+++ C + ++EAW + + G++PDA+ Y T+ + G A++
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485
Query: 192 MLFEMQNNQVRPNER 206
+ M+ + P+ER
Sbjct: 486 LCRRMKEDGFMPSER 500
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 135/308 (43%), Gaps = 37/308 (12%)
Query: 16 IFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACS 75
+F C+ ++G R +TY TL++ L+ R+ L+ + K + P+ I F A+I+
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 265
Query: 76 ESGNVDEAMKIFQKM-----------------------------------KDSGCKPTTS 100
+ GN+ EA ++++M GC P
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 325
Query: 101 TYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYK 160
TYNTLI G+ + E+ +KL M+ + + + TYN L+ +C + A V +
Sbjct: 326 TYNTLITGFCKSKRVEDGMKLFCEMTY-QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384
Query: 161 MVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGN 220
MV G+ PD VTYN L G+ +A M+ ++Q +++ + T II+ G C+
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444
Query: 221 MEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFS- 279
+++A + V P+ + + ++I G DK M+E G P +
Sbjct: 445 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 504
Query: 280 TIMDAWSS 287
T+ D ++S
Sbjct: 505 TLRDHYTS 512
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 113/248 (45%), Gaps = 1/248 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
++ V +G EA ++ +I P + TY +L+ + + G
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
PD + +N +I +S V++ MK+F +M G TYNTLI GY GK + K
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 380
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
+ M D V P+ TYNIL+ C+ IE+A +V + S + D +TYN + +
Sbjct: 381 VFNRMV-DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
+ + A + + V+P+ ++SG C++G +A + RMKE P+
Sbjct: 440 CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499
Query: 241 VVFNSLIK 248
+++ ++
Sbjct: 500 RIYDETLR 507
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
++ L GK +A + L + +ITY ++ L R + K L + + G+
Sbjct: 401 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGY 109
KPD+I + MI+ G EA K+ ++MK+ G P+ Y+ ++ +
Sbjct: 461 KPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 509
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 208/410 (50%), Gaps = 1/410 (0%)
Query: 4 LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
L G+ +EA ++ +++ G P+++TY++L+ + +S +L + K G PD
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 64 SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
+++ +++ S+ G + AM+ KM + +N+LI G+ + + +E+LK+ +
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
LM +KP+ T+ ++R + +EEA + ++M G++PDA+ Y TL A+ ++
Sbjct: 521 LMGI-YGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH 579
Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
+ Q+ MQ N++ + C +++ K +EDA +F + E ++ P++V +
Sbjct: 580 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 639
Query: 244 NSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVK 303
N++I G+ ++ D ++ L++ P+ VT + ++ M +F M +
Sbjct: 640 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 699
Query: 304 AGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQR 363
G +P+ + L + ++ + + + + M++ G+ P++V ++ +I G C ++
Sbjct: 700 KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDE 759
Query: 364 AMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
A +I+ + + + P++ Y L+ GY + + A L + M GV+P
Sbjct: 760 ATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 195/410 (47%), Gaps = 3/410 (0%)
Query: 13 AHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMIN 72
A + + +++ G P ++T+ TL+ ++ L +E+ G++PD I ++ +I+
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 73 ACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGK-PEESLKLLQLMSQDKNV 131
++G + K+F + G K +++ I Y G S+ +++ Q +
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ--GI 387
Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQ 191
PN TY IL++ C I EA+ + +++ G++P VTY++L + + G
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 192 MLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFL 251
+ +M P+ G++V G K+G M AMRF +M + N+VVFNSLI G+
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 252 DIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIH 311
+ D K LM +G+KPDV TF+T+M G + + +F M K G+EPD
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDAL 567
Query: 312 VFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKM 371
+ L + + +P + M++ + ++ + VI +++ A + +
Sbjct: 568 AYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL 627
Query: 372 CEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLV 421
E + P++ TY T++ GY ++ AE + ++++ P T+ ++
Sbjct: 628 IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 677
Score = 145 bits (366), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 152/325 (46%), Gaps = 1/325 (0%)
Query: 20 LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
++ + R ++ + +L+ R RF L + + G+KPD F ++ G
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546
Query: 80 VDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYN 139
++EA+ +F +M G +P Y TLI + KP L+L LM ++K + + N
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNK-ISADIAVCN 605
Query: 140 ILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNN 199
+++ + IE+A ++ ++PD VTYNT+ Y AE++ ++
Sbjct: 606 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVT 665
Query: 200 QVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGV 259
PN T I++ CK +M+ A+R M E PN V + L+ F D +G
Sbjct: 666 PFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGS 725
Query: 260 DKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKG 319
K M+E G+ P +V++S I+D G + + IF + A + PD+ ++IL +G
Sbjct: 726 FKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 785
Query: 320 YVRAGEPQKAESILTSMRKYGVHPN 344
Y + G +A + M + GV P+
Sbjct: 786 YCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 152/325 (46%), Gaps = 3/325 (0%)
Query: 113 GKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVT 172
G +++L++ +Q V P D Y +L + + ++ + K+ GI+P V+
Sbjct: 160 GMVDKALEIFVYSTQLGVVIPQDSVYRML-NSLIGSDRVDLIADHFDKLCRGGIEPSGVS 218
Query: 173 -YNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRM 231
+ + A GE +A + R +C ++ G + +E A R L +
Sbjct: 219 AHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLV 277
Query: 232 KELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLM 291
+ PN+V F +LI GF + D +ME+ G++PD++ +ST++D + AG++
Sbjct: 278 LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML 337
Query: 292 GKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTV 351
G ++F + G++ D+ VFS YV++G+ A + M G+ PNVV +T +
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL 397
Query: 352 ISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGV 411
I G C ++ A +Y ++ + G+ P++ TY +L+ G+ + L + M + G
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 412 RPKKSTIQLVADSWRAIGLAREAKR 436
P ++ D GL A R
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMR 482
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 140/276 (50%), Gaps = 5/276 (1%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
M + + +G+ EA ++F + + G P + Y TL+ A + + L L ++++ +
Sbjct: 538 MRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKI 597
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
D + N +I+ + +++A K F + + +P TYNT+I GY ++ + +E+ +
Sbjct: 598 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAER 657
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
+ +L+ + PN T IL+ C N ++ A + M G +P+AVTY L +
Sbjct: 658 IFELL-KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 716
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
++ + + ++ EMQ + P+ + II+ G CK G +++A ++ + ++ P++
Sbjct: 717 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 776
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTL--MEEFGVKPD 274
V + LI+G+ K V+ AL M GVKPD
Sbjct: 777 VAYAILIRGY--CKVGRLVEAALLYEHMLRNGVKPD 810
Score = 112 bits (279), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 168/375 (44%), Gaps = 11/375 (2%)
Query: 70 MINACSESGNVDEAMKIFQKMKDSGCK-PTTSTY---NTLIKGYGNVGKPEESLKLLQLM 125
++ C G VD+A++IF G P S Y N+LI G V + L
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLI-GSDRVDLIADHFDKLC-- 208
Query: 126 SQDKNVKPND-RTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYG 184
++P+ + ++ A K + +A + ++ G + V+ N + + +
Sbjct: 209 --RGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VD 265
Query: 185 ETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFN 244
+ A ++L + + PN T +++G+CK G M+ A M++ + P+L+ ++
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 245 SLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKA 304
+LI G+ K + GVK DVV FS+ +D + +G + ++ M+
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 305 GIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRA 364
GI P++ ++IL KG + G +A + + K G+ P++V ++++I G+C ++
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 365 MSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADS 424
++YE M ++G P++ Y L+ G + A M + +R + D
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 425 WRAIGLAREAKRVLK 439
W + EA +V +
Sbjct: 506 WCRLNRFDEALKVFR 520
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 101/205 (49%), Gaps = 1/205 (0%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+++L + +A FN LIE P ++TY T++ +R + ++
Sbjct: 608 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 667
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
P+++ +I+ ++ ++D A+++F M + G KP TY L+ + E S K
Sbjct: 668 GPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFK 727
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
L + M Q+K + P+ +Y+I++ C + ++EA N+ ++ + + + PD V Y L R Y
Sbjct: 728 LFEEM-QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 786
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNE 205
+ G A + M N V+P++
Sbjct: 787 CKVGRLVEAALLYEHMLRNGVKPDD 811
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 89/172 (51%), Gaps = 5/172 (2%)
Query: 12 EAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMI 71
EA IF L P +T T L+ L + + + S + + G KP+++ + ++
Sbjct: 654 EAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 713
Query: 72 NACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNV 131
+ S+S +++ + K+F++M++ G P+ +Y+ +I G G+ +E+ + + D +
Sbjct: 714 DWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFH-QAIDAKL 772
Query: 132 KPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
P+ Y IL+R +C + EA + M+ +G++PD + L RA ++Y
Sbjct: 773 LPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD----DLLQRALSEY 820
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 10/149 (6%)
Query: 298 FDDMVKAGIEPDIHVFSILAKGYVR-----AGEPQKAESILTSMRKYGVHPNVVMFTTVI 352
FD + + GIEP + A G+V GE KA + + G +V V+
Sbjct: 204 FDKLCRGGIEPS----GVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVL 259
Query: 353 SGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVR 412
G + +++ A + + + G PN+ T+ TL+ G+ + + RA +L +VME++G+
Sbjct: 260 KGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE 318
Query: 413 PKKSTIQLVADSWRAIGLAREAKRVLKSA 441
P + D + G+ ++ A
Sbjct: 319 PDLIAYSTLIDGYFKAGMLGMGHKLFSQA 347
Score = 33.1 bits (74), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 4 LVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPD 63
L +G+ EA IF+ I+ P ++ Y L+ + R L + ++G+KPD
Sbjct: 751 LCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Query: 64 SILFNAM 70
+L A+
Sbjct: 811 DLLQRAL 817
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 199/400 (49%), Gaps = 8/400 (2%)
Query: 14 HYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINA 73
H++ C I GH L +Y ++ L R RF LS++ K+ K G +PD + +++IN
Sbjct: 93 HHMEVCGI--GH--DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLING 148
Query: 74 CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP 133
+ V +A+ + KM++ G +P YNT+I G +G ++++L M +D V+
Sbjct: 149 FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD-GVRA 207
Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
+ TYN LV C +A ++ MV I P+ +T+ + + + G+ A ++
Sbjct: 208 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 267
Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
EM V P+ T +++G C G +++A + L M P++V +N+LI GF
Sbjct: 268 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 327
Query: 254 KDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVF 313
K D K M + G+ D +T++TI+ + AG QEIF M P+I +
Sbjct: 328 KRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTY 384
Query: 314 SILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCE 373
SIL G +KA + +M+K + ++ + VI G C ++ A ++ +
Sbjct: 385 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 444
Query: 374 IGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRP 413
G+ P++ +Y T++ G+ +Q +++ L + M+E G+ P
Sbjct: 445 KGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 202/433 (46%), Gaps = 22/433 (5%)
Query: 19 CLIEEGHRPTLITYTTLVAALTRQKRFKSI-----LSLISKVEKDGMKPDSILFNAMINA 73
CL+++G+ P ++ + + T + S+ + L K+ + P + F+ +++
Sbjct: 20 CLLQKGN-PVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSK 78
Query: 74 CSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKP 133
++S N D + +F M+ G +YN +I + +L ++ M + +P
Sbjct: 79 IAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMK-FGYEP 137
Query: 134 NDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML 193
+ T + L+ +C N + +A ++V KM G +PD V YNT+ + G A ++
Sbjct: 138 DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELF 197
Query: 194 FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDI 253
M+ + VR + T +V+G C G DA R + M ++ PN++ F ++I F+
Sbjct: 198 DRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVK- 256
Query: 254 KDSDGVDKALTLMEEFG---VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDI 310
+A+ L EE V PDV T++++++ G + + +++ D MV G PD+
Sbjct: 257 --EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314
Query: 311 HVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEK 370
++ L G+ ++ + + M + G+ + + + T+I G+ A + A I+ +
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 374
Query: 371 MCEIGINPNLKTYETLLWGYGEAKQPWRAEE---LLQVMEEKGVRPKKSTIQLVADSWRA 427
M PN++TY LL+G WR E+ L + M++ + +T +V
Sbjct: 375 M---DSRPNIRTYSILLYGLC---MNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 428 IGLAREAKRVLKS 440
IG +A + +S
Sbjct: 429 IGNVEDAWDLFRS 441
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 149/301 (49%), Gaps = 4/301 (1%)
Query: 8 GKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILF 67
G ++A +F+ + +G R +TY +LVA L R+ L+ + + P+ I F
Sbjct: 188 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF 247
Query: 68 NAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQ 127
A+I+ + G EAMK++++M P TYN+LI G G+ +E+ ++L LM
Sbjct: 248 TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT 307
Query: 128 DKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETY 187
K P+ TYN L+ +C ++E + +M G+ D +TYNT+ + Y Q G
Sbjct: 308 -KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 188 RAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLI 247
A+++ M + RPN RT I++ G C +E A+ M++ E+ ++ +N +I
Sbjct: 367 AAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423
Query: 248 KGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIE 307
G I + + + G+KPDVV+++T++ + K ++ M + G+
Sbjct: 424 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Query: 308 P 308
P
Sbjct: 484 P 484
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 39/273 (14%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+++ V +GK EA ++ + P + TY +L+ L R ++ + G
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
PD + +N +IN +S VDE K+F++M G T TYNT+I+GY G+P+ + +
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE 370
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
+ M +PN RTY+IL+ C +E+A + M S I+ D TYN
Sbjct: 371 IFSRMDS----RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN------ 420
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
I++ G CK GN+EDA + + P++
Sbjct: 421 -----------------------------IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDV 451
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKP 273
V + ++I GF + D D M+E G+ P
Sbjct: 452 VSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 67/149 (44%)
Query: 296 EIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGW 355
++F M+++ P I FS + ++ S+ M G+ ++ + VI+
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 356 CNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKK 415
C + A+S+ KM + G P++ T +L+ G+ + + + A +L+ MEE G RP
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 416 STIQLVADSWRAIGLAREAKRVLKSAEED 444
+ D IGL +A + E D
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERD 203
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 189/388 (48%), Gaps = 4/388 (1%)
Query: 31 TYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKM 90
T+ ++ L ++ + K + +E G+KP + +N ++ S G ++ A I +M
Sbjct: 227 TFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEM 286
Query: 91 KDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNS 150
K G +P TYN ++ N G+ E L+ ++ + + P+ +YNIL+R +
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNEGRASEVLREMK----EIGLVPDSVSYNILIRGCSNNGD 342
Query: 151 IEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGI 210
+E A+ +MV G+ P TYNTL + AE ++ E++ + + T I
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402
Query: 211 IVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG 270
+++GYC+ G+ + A M + P + SLI + D+ + G
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462
Query: 271 VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAE 330
+KPD+V +T+MD + G M + + +M I PD ++ L +G G+ ++A
Sbjct: 463 MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAR 522
Query: 331 SILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGY 390
++ M++ G+ P+ + + T+ISG+ + A + ++M +G NP L TY LL G
Sbjct: 523 ELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGL 582
Query: 391 GEAKQPWRAEELLQVMEEKGVRPKKSTI 418
+ ++ AEELL+ M+ +G+ P S+
Sbjct: 583 SKNQEGELAEELLREMKSEGIVPNDSSF 610
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 179/351 (50%), Gaps = 4/351 (1%)
Query: 7 KGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSIL 66
+G+ A I + + +G +P + TY +++ + + R +L + ++ G+ PDS+
Sbjct: 273 RGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI---GLVPDSVS 329
Query: 67 FNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS 126
+N +I CS +G+++ A +M G PT TYNTLI G K E + L++ +
Sbjct: 330 YNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREI- 388
Query: 127 QDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGET 186
++K + + TYNIL+ +C ++A+ + +M+ GIQP TY +L + +T
Sbjct: 389 REKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKT 448
Query: 187 YRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSL 246
A+++ ++ ++P+ ++ G+C GNM+ A L M + ++P+ V +N L
Sbjct: 449 READELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCL 508
Query: 247 IKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGI 306
++G + + + M+ G+KPD ++++T++ +S G + D+M+ G
Sbjct: 509 MRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGF 568
Query: 307 EPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCN 357
P + ++ L KG + E + AE +L M+ G+ PN F +VI N
Sbjct: 569 NPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
Score = 159 bits (401), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 186/383 (48%), Gaps = 4/383 (1%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
+N+L +GK +A + G +PT++TY TLV + + R + +IS+++ G
Sbjct: 232 INVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGF 291
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLK 120
+PD +N +++ G E + ++MK+ G P + +YN LI+G N G E +
Sbjct: 292 QPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFA 348
Query: 121 LLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAY 180
M + V P TYN L+ +N IE A ++ ++ GI D+VTYN L Y
Sbjct: 349 YRDEMVKQGMV-PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGY 407
Query: 181 AQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNL 240
Q+G+ +A + EM + ++P + T ++ C++ +A ++ + P+L
Sbjct: 408 CQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDL 467
Query: 241 VVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDD 300
V+ N+L+ G I + D L M+ + PD VT++ +M G + +E+ +
Sbjct: 468 VMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGE 527
Query: 301 MVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVK 360
M + GI+PD ++ L GY + G+ + A + M G +P ++ + ++ G +
Sbjct: 528 MKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQE 587
Query: 361 MQRAMSIYEKMCEIGINPNLKTY 383
+ A + +M GI PN ++
Sbjct: 588 GELAEELLREMKSEGIVPNDSSF 610
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 188/406 (46%), Gaps = 39/406 (9%)
Query: 64 SILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQ 123
+ILF+ ++ C + VDEA++ F MK+ G P T T N ++ + + E +
Sbjct: 155 TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYA 214
Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
M + +K N T+NI++ C + +++A + M GI+P VTYNTL + ++
Sbjct: 215 DMYR-MEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273
Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
G A ++ EM++ +P+ +T I+S C EG + +R MKE+ + P+ V +
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSY 330
Query: 244 NSLIKGFLDIKD--------------------------------SDGVDKALTLMEEF-- 269
N LI+G + D + ++ A L+ E
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390
Query: 270 -GVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQK 328
G+ D VT++ +++ + G K + D+M+ GI+P ++ L R + ++
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE 450
Query: 329 AESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLW 388
A+ + + G+ P++VM T++ G C M RA S+ ++M + INP+ TY L+
Sbjct: 451 ADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMR 510
Query: 389 GYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREA 434
G + A EL+ M+ +G++P + + + G + A
Sbjct: 511 GLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA 556
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 159/351 (45%), Gaps = 32/351 (9%)
Query: 124 LMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQY 183
+++ D+ + +++LVR C ++EA Y M G P T N + ++
Sbjct: 144 VLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRL 203
Query: 184 GETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVF 243
A +M +++ N T I+++ CKEG ++ A FL M+ + P +V +
Sbjct: 204 NRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTY 263
Query: 244 NSLIKGFL----------------------DIKDSDGV----------DKALTLMEEFGV 271
N+L++GF D++ + + + L M+E G+
Sbjct: 264 NTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGL 323
Query: 272 KPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAES 331
PD V+++ ++ S+ G + D+MVK G+ P + ++ L G + + AE
Sbjct: 324 VPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEI 383
Query: 332 ILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYG 391
++ +R+ G+ + V + +I+G+C ++A +++++M GI P TY +L++
Sbjct: 384 LIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLC 443
Query: 392 EAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAE 442
+ A+EL + + KG++P + + D AIG A +LK +
Sbjct: 444 RKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMD 494
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 126/275 (45%), Gaps = 38/275 (13%)
Query: 20 LIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGN 79
++++G PT TY TL+ L + + ++ LI ++ + G+ DS+ +N +IN + G+
Sbjct: 353 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGD 412
Query: 80 VDEAMKIFQKMKDSGCKPTTSTY-----------------------------------NT 104
+A + +M G +PT TY NT
Sbjct: 413 AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNT 472
Query: 105 LIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVAS 164
L+ G+ +G + + LL+ M ++ P+D TYN L+R C + EEA ++ +M
Sbjct: 473 LMDGHCAIGNMDRAFSLLKEMDM-MSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRR 531
Query: 165 GIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDA 224
GI+PD ++YNTL Y++ G+T A + EM + P T ++ G K E A
Sbjct: 532 GIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELA 591
Query: 225 MRFLYRMKELEVHPNLVVFNSLIKGF--LDIKDSD 257
L MK + PN F S+I+ LD K SD
Sbjct: 592 EELLREMKSEGIVPNDSSFCSVIEAMSNLDAKKSD 626
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 57/112 (50%)
Query: 1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGM 60
M L G+GK EA + + G +P I+Y TL++ +++ K + ++ G
Sbjct: 509 MRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGF 568
Query: 61 KPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNV 112
P + +NA++ S++ + A ++ ++MK G P S++ ++I+ N+
Sbjct: 569 NPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 192,349,716
Number of Sequences: 539616
Number of extensions: 7642770
Number of successful extensions: 34245
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 105
Number of HSP's that attempted gapping in prelim test: 21834
Number of HSP's gapped (non-prelim): 3543
length of query: 548
length of database: 191,569,459
effective HSP length: 123
effective length of query: 425
effective length of database: 125,196,691
effective search space: 53208593675
effective search space used: 53208593675
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)